"Checked"	"Confidence"	"Identifying Node Type"	"Identifying Node"	"Search ID"	"Identifying Node No"	"PSM Ambiguity"	"Sequence"	"Annotated Sequence"	"Modifications"	"# Protein Groups"	"# Proteins"	"Master Protein Accessions"	"Master Protein Descriptions"	"Protein Accessions"	"Protein Descriptions"	"# Missed Cleavages"	"Charge"	"Original Precursor Charge"	"DeltaScore"	"DeltaCn"	"Rank"	"Search Engine Rank"	"Concatenated Rank"	"m/z [Da]"	"MH+ [Da]"	"Theo. MH+ [Da]"	"DeltaM [ppm]"	"Deltam/z [Da]"	"Ions Matched"	"Matched Ions"	"Total Ions"	"Intensity"	"Activation Type"	"MS Order"	"Isolation Interference [%]"	"Average Reporter S/N"	"Ion Inject Time [ms]"	"RT [min]"	"First Scan"	"Last Scan"	"Master Scan(s)"	"Spectrum File"	"File ID"	"Abundance: 126"	"Abundance: 127N"	"Abundance: 127C"	"Abundance: 128N"	"Abundance: 128C"	"Abundance: 129N"	"Abundance: 129C"	"Abundance: 130N"	"Abundance: 130C"	"Abundance: 131"	"Quan Info"	"Peptides Matched"	"Ions Score"	"Identity Strict"	"Identity Relaxed"	"Expectation Value"	"Homology Threshold"	"Percolator q-Value"	"Percolator PEP"	"Percolator SVMScore"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLISKLK"	"[K].LLISKLK.[A]"	""	"1"	"1"	"Q9Z0W0"	"Glucagon-like peptide 2 receptor OS=Rattus norvegicus OX=10116 GN=Glp2r PE=2 SV=1"	"Q9Z0W0"	"Glucagon-like peptide 2 receptor OS=Rattus norvegicus OX=10116 GN=Glp2r PE=2 SV=1"	"1"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"3"	"407.79175"	"814.57622"	"814.57605"	"0.21"	"0.00008"	"3/52"	"3"	"52"	"192491.340759277"	"HCD"	"MS2"	"7.11065"	"1.9"	"100.000"	"110.9814"	"38555"	"38555"	"38549"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	"4.0"	""	"2.4"	""	"3.8"	""	"3.7"	"4.8"	"NoQuanLabels"	"6"	"12"	"14.000"	"13.000"	"0.0169871786711476"	""	"0.008641"	"0.1075"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPQLFR"	"[M].aAPQLFR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.7377"	"0.0000"	"1"	"1"	"1"	"422.73676"	"844.46623"	"844.46756"	"-1.57"	"-0.00066"	"6/56"	"6"	"56"	"2917383.82281494"	"HCD"	"MS2"	"0.8889695"	"16.3"	"100.000"	"71.5546"	"24076"	"24076"	"24058"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.0"	""	"21.0"	""	"24.4"	""	"25.9"	""	"32.0"	"27.8"	"NoQuanLabels"	"251"	"61"	"30.000"	"23.000"	"1.02245387644615E-05"	""	"0.004022"	"0.04287"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPQLFR"	"[M].aAPQLFR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.7679"	"0.0000"	"1"	"1"	"1"	"422.73688"	"844.46648"	"844.46756"	"-1.29"	"-0.00054"	"6/56"	"6"	"56"	"2680955.4677124"	"HCD"	"MS2"	"0.5074335"	"15.3"	"100.000"	"71.7014"	"24122"	"24122"	"24104"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.6"	""	"16.3"	""	"25.6"	""	"26.8"	""	"24.4"	"33.0"	"NoQuanLabels"	"249"	"56"	"30.000"	"23.000"	"3.31260269944952E-05"	""	"0.004942"	"0.05353"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPQLFR"	"[M].aAPQLFR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"422.73706"	"844.46684"	"844.46756"	"-0.85"	"-0.00036"	"5/56"	"5"	"56"	"572815.486694336"	"HCD"	"MS2"	"13.88374"	"23.9"	"100.000"	"71.9848"	"24237"	"24237"	"24219"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.2"	""	"33.9"	""	"34.6"	""	"40.9"	""	"39.1"	"39.3"	"NoQuanLabels"	"248"	"34"	"30.000"	"23.000"	"0.00481306453828404"	""	"0.005309"	"0.06008"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPQLFR"	"[M].aAPQLFR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"422.73712"	"844.46697"	"844.46756"	"-0.71"	"-0.00030"	"6/56"	"6"	"56"	"680732.396789551"	"HCD"	"MS2"	"37.64994"	"13.7"	"100.000"	"71.2616"	"23957"	"23957"	"23935"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.4"	""	"14.7"	""	"19.3"	""	"21.8"	""	"25.5"	"32.5"	"NoQuanLabels"	"249"	"60"	"30.000"	"23.000"	"1.1459597168327E-05"	""	"0.0003538"	"0.007438"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPQLFR"	"[M].aAPQLFR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"422.73734"	"844.46739"	"844.46756"	"-0.20"	"-0.00009"	"6/56"	"6"	"56"	"764151.910888672"	"HCD"	"MS2"	"35.187"	"13.7"	"100.000"	"71.3969"	"23999"	"23999"	"23971"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.9"	""	"19.3"	""	"20.4"	""	"17.7"	""	"25.8"	"32.6"	"NoQuanLabels"	"249"	"61"	"30.000"	"23.000"	"1.10960741797651E-05"	""	"0.0003538"	"0.007177"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADFLPSR"	"[M].aDFLPSR.[S]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"424.21844"	"847.42961"	"847.43084"	"-1.45"	"-0.00062"	"5/56"	"5"	"56"	"285120.754577637"	"HCD"	"MS2"	"25.89211"	"10.9"	"100.000"	"75.5664"	"25688"	"25688"	"25659"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.2"	""	"15.5"	""	"14.3"	""	"16.2"	""	"20.6"	"22.6"	"NoQuanLabels"	"251"	"25"	"30.000"	"23.000"	"0.040331439759936"	""	"0.00736"	"0.08796"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQILPIR"	"[M].aQILPIR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"426.76801"	"852.52873"	"852.53016"	"-1.68"	"-0.00071"	"4/60"	"4"	"60"	"406135.090698242"	"HCD"	"MS2"	"10.26146"	"6.1"	"100.000"	"85.2296"	"29565"	"29565"	"29553"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.4"	""	"7.5"	""	"7.1"	""	"11.3"	""	"11.4"	"12.5"	"NoQuanLabels"	"23"	"35"	"20.000"	"13.000"	"0.000358672302170803"	""	"0.0003538"	"0.00614"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQILPIR"	"[M].aQILPIR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"426.76819"	"852.52910"	"852.53016"	"-1.25"	"-0.00053"	"6/60"	"6"	"60"	"782602.070129395"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"86.0522"	"29881"	"29881"	"29872"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.8"	""	"5.3"	""	"6.3"	""	"7.3"	""	"8.5"	"7.5"	"NoQuanLabels"	"23"	"48"	"20.000"	"13.000"	"1.6508128483567E-05"	""	"0"	"0.003077"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQILPIR"	"[M].aQILPIR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"426.76831"	"852.52934"	"852.53016"	"-0.96"	"-0.00041"	"5/60"	"5"	"60"	"467970.182495117"	"HCD"	"MS2"	"3.142623"	"3.4"	"100.000"	"86.1357"	"29916"	"29916"	"29900"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.6"	""	"4.5"	""	"5.6"	""	"5.5"	""	"6.3"	"8.5"	"NoQuanLabels"	"23"	"47"	"20.000"	"13.000"	"2.44173113130026E-05"	""	"0"	"0.002016"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQILPIR"	"[M].aQILPIR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"426.76831"	"852.52934"	"852.53016"	"-0.96"	"-0.00041"	"6/60"	"6"	"60"	"827628.403991699"	"HCD"	"MS2"	"13.12074"	"6.8"	"100.000"	"85.3042"	"29589"	"29589"	"29578"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.2"	""	"6.1"	""	"11.7"	""	"13.1"	""	"7.3"	"15.7"	"NoQuanLabels"	"23"	"43"	"20.000"	"13.000"	"5.65845466033669E-05"	""	"0"	"0.00287"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQILPIR"	"[M].aQILPIR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"426.76834"	"852.52941"	"852.53016"	"-0.89"	"-0.00038"	"5/60"	"5"	"60"	"6025552.46020508"	"HCD"	"MS2"	"0"	"1.1"	"100.000"	"85.8378"	"29797"	"29797"	"29788"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.5"	""	"1.7"	""	""	""	"3.5"	""	"2.1"	""	"NoQuanLabels"	"23"	"44"	"20.000"	"13.000"	"4.83835622642111E-05"	""	"0.0003538"	"0.00635"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQILPIR"	"[M].aQILPIR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"426.76834"	"852.52941"	"852.53016"	"-0.89"	"-0.00038"	"5/60"	"5"	"60"	"7038382.31237793"	"HCD"	"MS2"	"0"	"0.5"	"100.000"	"85.7888"	"29777"	"29777"	"29768"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	""	""	"2.3"	""	""	"2.7"	"NoQuanLabels"	"23"	"47"	"20.000"	"13.000"	"2.3697244002605E-05"	""	"0.0002479"	"0.005531"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQILPIR"	"[M].aQILPIR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"426.76846"	"852.52965"	"852.53016"	"-0.60"	"-0.00026"	"5/60"	"5"	"60"	"8131022.63458252"	"HCD"	"MS2"	"0"	"2.3"	"100.000"	"85.5183"	"29674"	"29674"	"29665"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	"2.9"	""	"3.8"	""	"6.3"	""	"5.8"	"3.1"	"NoQuanLabels"	"22"	"47"	"20.000"	"13.000"	"2.2824048692004E-05"	""	"0.0002479"	"0.005828"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQILPIR"	"[M].aQILPIR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"426.76855"	"852.52983"	"852.53016"	"-0.39"	"-0.00017"	"5/60"	"5"	"60"	"8889919.96655273"	"HCD"	"MS2"	"0.2040708"	"1.3"	"100.000"	"85.5698"	"29693"	"29693"	"29685"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.7"	""	""	""	""	""	"3.8"	""	"1.9"	"3.9"	"NoQuanLabels"	"22"	"44"	"20.000"	"13.000"	"4.62799291222888E-05"	""	"0.0001301"	"0.004412"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLALISR"	"[-].mLALISR.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"431.24603"	"861.48479"	"861.48625"	"-1.70"	"-0.00073"	"5/48"	"5"	"48"	"365971.629760742"	"HCD"	"MS2"	"16.24205"	"8.5"	"100.000"	"77.3352"	"26415"	"26415"	"26396"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.1"	""	"13.6"	""	"11.7"	""	"9.8"	""	"18.7"	"18.8"	"NoQuanLabels"	"258"	"39"	"31.000"	"24.000"	"0.00158704671434797"	"17"	"0.001546"	"0.01884"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLALISR"	"[-].mLALISR.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"431.24606"	"861.48485"	"861.48625"	"-1.63"	"-0.00070"	"6/48"	"6"	"48"	"314033.536437988"	"HCD"	"MS2"	"42.94658"	"7.1"	"100.000"	"76.7079"	"26160"	"26160"	"26132"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.6"	""	"11.0"	""	"8.3"	""	"15.7"	""	"12.3"	"11.6"	"NoQuanLabels"	"186"	"52"	"29.000"	"22.000"	"6.13031722577219E-05"	"22"	"0.0002479"	"0.005652"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLALISR"	"[-].mLALISR.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"431.24606"	"861.48485"	"861.48625"	"-1.63"	"-0.00070"	"6/48"	"6"	"48"	"299894.010009766"	"HCD"	"MS2"	"13.97967"	"9.0"	"100.000"	"77.4913"	"26468"	"26468"	"26445"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.4"	""	"10.7"	""	"13.0"	""	"15.5"	"2.3"	"17.9"	"18.4"	"NoQuanLabels"	"186"	"33"	"29.000"	"22.000"	"0.00514615601570635"	"15"	"0.0023"	"0.02419"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLALISR"	"[-].mLALISR.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"431.24606"	"861.48485"	"861.48625"	"-1.63"	"-0.00070"	"5/48"	"5"	"48"	"554813.063964844"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"77.0265"	"26289"	"26289"	"26269"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.2"	""	"7.3"	""	"6.5"	""	"11.0"	""	"16.6"	"18.7"	"NoQuanLabels"	"186"	"43"	"29.000"	"22.000"	"0.000498290891487408"	"19"	"0.0008629"	"0.009654"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLALISR"	"[-].mLALISR.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"431.24640"	"861.48552"	"861.48625"	"-0.85"	"-0.00036"	"6/48"	"6"	"48"	"411111.579833984"	"HCD"	"MS2"	"12.03329"	"7.5"	"100.000"	"76.8570"	"26211"	"26211"	"26192"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.0"	""	"8.5"	""	"11.9"	""	"13.1"	""	"17.5"	"13.4"	"NoQuanLabels"	"185"	"42"	"29.000"	"22.000"	"0.00054468038120392"	"22"	"0.000936"	"0.01232"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLALISR"	"[-].mLALISR.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"431.24664"	"861.48601"	"861.48625"	"-0.28"	"-0.00012"	"6/48"	"6"	"48"	"546875.051452637"	"HCD"	"MS2"	"9.530643"	"6.7"	"100.000"	"77.1568"	"26332"	"26332"	"26314"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.8"	""	"4.6"	""	"8.8"	""	"11.6"	""	"16.0"	"14.1"	"NoQuanLabels"	"184"	"39"	"29.000"	"22.000"	"0.00117432370410644"	"18"	"0.001311"	"0.01571"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSFGGR"	"[K].gGSFGGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"433.73709"	"866.46691"	"866.46818"	"-1.47"	"-0.00064"	"6/48"	"6"	"48"	"4254293.78723145"	"HCD"	"MS2"	"23.64275"	"342.7"	"100.000"	"22.8395"	"4323"	"4323"	"4294"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"440.8"	""	"422.8"	""	"369.9"	""	"660.7"	""	"725.1"	"635.0"	""	"126"	"16"	"27.000"	"21.000"	"0.157884882941023"	"14"	"0.003507"	"0.03649"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSFGGR"	"[K].gGSFGGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"433.73715"	"866.46703"	"866.46818"	"-1.33"	"-0.00058"	"6/48"	"6"	"48"	"23597021.1001587"	"HCD"	"MS2"	"7.290311"	"1494.5"	"100.000"	"22.5205"	"4192"	"4192"	"4170"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2008.5"	""	"1746.7"	""	"1263.4"	""	"3503.3"	""	"3083.4"	"2593.7"	""	"149"	"26"	"28.000"	"21.000"	"0.020377752010985"	"18"	"0.002379"	"0.02462"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSFGGR"	"[K].gGSFGGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"433.73752"	"866.46776"	"866.46818"	"-0.49"	"-0.00021"	"6/48"	"6"	"48"	"25366017.4276733"	"HCD"	"MS2"	"7.014051"	"1566.9"	"100.000"	"22.5621"	"4192"	"4192"	"4174"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2134.0"	""	"1796.0"	""	"1318.1"	""	"3709.1"	""	"3257.3"	"2754.1"	""	"149"	"26"	"28.000"	"21.000"	"0.0198224016955011"	"18"	"0.0023"	"0.02404"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDLGLAGR"	"[-].mDLGLAGR.[R]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q920P0"	"L-xylulose reductase OS=Rattus norvegicus OX=10116 GN=Dcxr PE=1 SV=1"	"Q920P0"	"L-xylulose reductase OS=Rattus norvegicus OX=10116 GN=Dcxr PE=1 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"437.72537"	"874.44347"	"874.44511"	"-1.88"	"-0.00082"	"7/56"	"7"	"56"	"202301.39666748"	"HCD"	"MS2"	"38.26722"	"8.6"	"100.000"	"80.2337"	"27578"	"27578"	"27550"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.8"	""	"12.0"	""	"11.0"	""	"14.2"	""	"16.6"	"16.6"	"NoQuanLabels"	"245"	"34"	"30.000"	"23.000"	"0.00458285470633265"	"18"	"0.000936"	"0.0117"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDLGLAGR"	"[-].mDLGLAGR.[R]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q920P0"	"L-xylulose reductase OS=Rattus norvegicus OX=10116 GN=Dcxr PE=1 SV=1"	"Q920P0"	"L-xylulose reductase OS=Rattus norvegicus OX=10116 GN=Dcxr PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"437.72562"	"874.44396"	"874.44511"	"-1.32"	"-0.00058"	"7/56"	"7"	"56"	"225270.553588867"	"HCD"	"MS2"	"56.31213"	"9.9"	"100.000"	"80.2470"	"27580"	"27580"	"27550"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.9"	""	"10.7"	""	"11.7"	""	"20.4"	""	"18.0"	"20.6"	"NoQuanLabels"	"187"	"36"	"29.000"	"22.000"	"0.00233244606969166"	""	"0.0004639"	"0.008026"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].DSAFGLLR.[V]"	""	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"439.73956"	"878.47185"	"878.47304"	"-1.36"	"-0.00060"	"7/58"	"7"	"58"	"1168485.25091553"	"HCD"	"MS2"	"17.33038"	"13.5"	"100.000"	"67.4771"	"22415"	"22415"	"22392"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.9"	""	"15.9"	""	"22.0"	""	"21.7"	""	"25.1"	"27.0"	"NoQuanLabels"	"245"	"48"	"30.000"	"23.000"	"0.000197304090309338"	"21"	"0.00263"	"0.0256"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].DSAFGLLR.[V]"	""	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"439.73969"	"878.47209"	"878.47304"	"-1.08"	"-0.00047"	"7/58"	"7"	"58"	"2239459.10675049"	"HCD"	"MS2"	"2.564938"	"11.3"	"100.000"	"67.7401"	"22522"	"22522"	"22513"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.9"	""	"15.5"	""	"15.9"	""	"20.3"	""	"19.9"	"19.9"	"NoQuanLabels"	"245"	"49"	"30.000"	"23.000"	"0.000140002596011747"	""	"0.0006732"	"0.009061"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].DSAFGLLR.[V]"	""	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"439.73993"	"878.47258"	"878.47304"	"-0.52"	"-0.00023"	"7/58"	"7"	"58"	"953962.893798828"	"HCD"	"MS2"	"26.18611"	"13.7"	"100.000"	"67.5731"	"22439"	"22439"	"22414"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.6"	""	"17.0"	""	"20.1"	""	"22.3"	""	"25.1"	"29.2"	"NoQuanLabels"	"245"	"45"	"30.000"	"23.000"	"0.00043464640181113"	"20"	"0.003507"	"0.0366"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].DSAFGLLR.[V]"	""	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"439.73993"	"878.47258"	"878.47304"	"-0.52"	"-0.00023"	"7/58"	"7"	"58"	"2250532.13470459"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"67.8663"	"22559"	"22559"	"22542"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.6"	""	"17.0"	""	"18.3"	""	"22.2"	""	"26.1"	"24.4"	"NoQuanLabels"	"245"	"43"	"30.000"	"23.000"	"0.000671639282028046"	""	"0.004205"	"0.04594"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAELAA"	"[R].aLAELAA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"444.27310"	"887.53893"	"887.53995"	"-1.15"	"-0.00051"	"6/50"	"6"	"50"	"4796206.25408936"	"HCD"	"MS2"	"29.59049"	"54.2"	"100.000"	"78.4575"	"26864"	"26864"	"26851"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.3"	""	"69.7"	""	"81.8"	""	"82.4"	""	"102.0"	"107.1"	""	"194"	"36"	"29.000"	"22.000"	"0.00241419159873392"	"15"	"0.00736"	"0.0849"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAELAA"	"[R].aLAELAA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"444.27316"	"887.53905"	"887.53995"	"-1.01"	"-0.00045"	"6/50"	"6"	"50"	"5452838.60784912"	"HCD"	"MS2"	"0.1287532"	"72.4"	"100.000"	"79.0413"	"27098"	"27098"	"27083"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.4"	""	"101.5"	""	"88.8"	""	"128.5"	""	"123.5"	"158.4"	""	"194"	"37"	"29.000"	"22.000"	"0.00213683866916185"	"16"	"0.007476"	"0.08926"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAELAA"	"[R].aLAELAA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"444.27325"	"887.53923"	"887.53995"	"-0.81"	"-0.00036"	"6/50"	"6"	"50"	"5048462.46868896"	"HCD"	"MS2"	"27.45999"	"61.2"	"100.000"	"78.5223"	"26885"	"26885"	"26868"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.9"	""	"91.2"	""	"83.1"	""	"93.6"	"1.6"	"105.6"	"116.6"	""	"194"	"36"	"29.000"	"22.000"	"0.00234839817533409"	"15"	"0.003717"	"0.03873"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAELAA"	"[R].aLAELAA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.9714"	"0.0000"	"1"	"1"	"1"	"444.27332"	"887.53935"	"887.53995"	"-0.67"	"-0.00030"	"6/50"	"6"	"50"	"4420977.45831299"	"HCD"	"MS2"	"0.1716867"	"63.3"	"100.000"	"79.1081"	"27121"	"27121"	"27105"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"70.2"	""	"81.3"	""	"93.5"	""	"101.3"	""	"113.9"	"142.2"	""	"194"	"35"	"29.000"	"22.000"	"0.0028560889847848"	"15"	"0.007279"	"0.08363"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAELAA"	"[R].aLAELAA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.9400"	"0.0000"	"1"	"1"	"1"	"444.27341"	"887.53954"	"887.53995"	"-0.46"	"-0.00021"	"5/50"	"5"	"50"	"24697206.7028809"	"HCD"	"MS2"	"0.3029197"	"89.0"	"29.939"	"78.7390"	"26977"	"26977"	"26965"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"117.3"	""	"127.6"	""	"117.2"	""	"162.6"	""	"152.9"	"171.8"	""	"194"	"50"	"29.000"	"22.000"	"0.000105140910660057"	"19"	"0.005309"	"0.05951"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAELAA"	"[R].aLAELAA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"444.27393"	"887.54057"	"887.53995"	"0.71"	"0.00031"	"6/50"	"6"	"50"	"23793163.8214111"	"HCD"	"MS2"	"0.1922341"	"126.4"	"42.617"	"78.8129"	"27002"	"27002"	"26985"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"158.6"	""	"179.7"	""	"173.2"	""	"193.4"	""	"243.5"	"256.2"	""	"195"	"37"	"29.000"	"22.000"	"0.00214291337596521"	"16"	"0.004752"	"0.05051"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTSAGR"	"[R].gLTSAGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"445.76608"	"890.52489"	"890.52570"	"-0.91"	"-0.00040"	"6/50"	"6"	"50"	"35786398.5693359"	"HCD"	"MS2"	"13.36742"	"849.1"	"37.959"	"23.1193"	"4437"	"4437"	"4421"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1177.4"	""	"1186.3"	""	"1254.4"	""	"1420.1"	""	"1514.3"	"1495.8"	""	"144"	"31"	"28.000"	"21.000"	"0.00519197385011688"	""	"0.001812"	"0.02074"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTSAGR"	"[R].gLTSAGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"445.76617"	"890.52507"	"890.52570"	"-0.70"	"-0.00031"	"6/50"	"6"	"50"	"35910595.7324219"	"HCD"	"MS2"	"24.92407"	"708.4"	"29.508"	"23.1517"	"4433"	"4433"	"4415"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"997.5"	""	"962.4"	""	"1080.5"	""	"1224.2"	""	"1235.8"	"1214.1"	""	"144"	"31"	"28.000"	"21.000"	"0.0055505049772639"	""	"0.001546"	"0.01933"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNFGGR"	"[KR].gGNFGGR.[SG]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"P04256; Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"447.24292"	"893.47856"	"893.47908"	"-0.58"	"-0.00026"	"6/58"	"6"	"58"	"9455791.77789307"	"HCD"	"MS2"	"37.9534"	"633.3"	"100.000"	"22.2522"	"4083"	"4083"	"4065"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"854.0"	""	"696.6"	""	"614.2"	""	"1444.3"	"1.8"	"1248.9"	"1147.7"	""	"216"	"22"	"30.000"	"23.000"	"0.069891402500847"	"22"	"0.002871"	"0.02708"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNFGGR"	"[KR].gGNFGGR.[SG]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"P04256; Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"447.24316"	"893.47905"	"893.47908"	"-0.03"	"-0.00001"	"6/58"	"6"	"58"	"11621407.6914673"	"HCD"	"MS2"	"60.17791"	"787.5"	"100.000"	"22.3028"	"4087"	"4087"	"4056"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"986.1"	""	"893.3"	""	"765.1"	""	"1773.9"	"1.4"	"1600.5"	"1454.9"	""	"216"	"21"	"30.000"	"23.000"	"0.0906616785440949"	"22"	"0.001546"	"0.0195"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPGAQR"	"[K].aAPGAQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"450.26633"	"899.52538"	"899.52603"	"-0.73"	"-0.00033"	"6/52"	"6"	"52"	"3452593.11260986"	"HCD"	"MS2"	"14.95195"	"195.9"	"100.000"	"19.3800"	"2935"	"2935"	"2926"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"244.2"	""	"215.2"	""	"233.9"	""	"388.9"	""	"388.9"	"391.6"	""	"133"	"14"	"28.000"	"21.000"	"0.267190889214545"	"13"	"0.003189"	"0.03213"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANITSLG"	"[R].aNITSLG.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"452.76819"	"904.52910"	"904.53011"	"-1.12"	"-0.00051"	"5/50"	"5"	"50"	"8835500.23931885"	"HCD"	"MS2"	"4.646298"	"126.5"	"100.000"	"61.4457"	"19954"	"19954"	"19937"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"92.7"	"7.0"	"99.6"	""	"142.3"	""	"311.4"	""	"305.5"	"255.1"	""	"156"	"28"	"28.000"	"21.000"	"0.0121645095220502"	"18"	"0.00447"	"0.04746"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANITSLG"	"[R].aNITSLG.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"452.76834"	"904.52941"	"904.53011"	"-0.78"	"-0.00035"	"5/50"	"5"	"50"	"8747637.8024292"	"HCD"	"MS2"	"2.562791"	"135.6"	"100.000"	"61.2899"	"19906"	"19906"	"19889"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"104.9"	"6.6"	"91.9"	""	"162.4"	""	"331.3"	""	"331.4"	"264.4"	""	"154"	"31"	"28.000"	"21.000"	"0.00586800837719567"	"20"	"0.003922"	"0.03966"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANITSLG"	"[R].aNITSLG.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.76837"	"904.52947"	"904.53011"	"-0.71"	"-0.00032"	"4/50"	"4"	"50"	"2113652.30584717"	"HCD"	"MS2"	"31.87934"	"38.9"	"100.000"	"60.9878"	"19782"	"19782"	"19769"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.3"	"2.6"	"35.8"	""	"36.6"	""	"92.3"	"0.2"	"90.2"	"76.5"	""	"163"	"27"	"29.000"	"22.000"	"0.0170670165151848"	"14"	"0.005829"	"0.06518"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPPPVR"	"[R].gGPPPVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"454.77863"	"908.54997"	"908.55152"	"-1.70"	"-0.00077"	"5/50"	"5"	"50"	"28632188.4714355"	"HCD"	"MS2"	"6.904563"	"659.9"	"47.823"	"23.0804"	"4422"	"4422"	"4405"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"705.0"	""	"792.1"	""	"818.9"	""	"1156.4"	""	"1342.7"	"1464.2"	""	"36"	"23"	"22.000"	"15.000"	"0.00951201453195325"	"14"	"0.001036"	"0.01362"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPPPVR"	"[R].gGPPPVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"454.77893"	"908.55058"	"908.55152"	"-1.03"	"-0.00047"	"6/50"	"6"	"50"	"22860343.3293457"	"HCD"	"MS2"	"13.20015"	"863.1"	"72.526"	"23.1151"	"4418"	"4418"	"4399"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"959.3"	""	"1033.9"	""	"1023.1"	""	"1502.9"	""	"1744.4"	"1947.7"	""	"36"	"20"	"22.000"	"15.000"	"0.0173889158218166"	"14"	"0.001374"	"0.016"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADVLSVLR"	"[M].aDVLSVLR.[Q]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q4V8C8"	"Parafibromin OS=Rattus norvegicus OX=10116 GN=Cdc73 PE=2 SV=1"	"Q4V8C8"	"Parafibromin OS=Rattus norvegicus OX=10116 GN=Cdc73 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"457.76855"	"914.52983"	"914.53056"	"-0.79"	"-0.00036"	"6/62"	"6"	"62"	"262326.870605469"	"HCD"	"MS2"	"50.28084"	"9.1"	"100.000"	"108.4310"	"37740"	"37740"	"37727"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.2"	""	"15.7"	""	"9.2"	""	"19.4"	""	"9.7"	"11.6"	"NoQuanLabels"	"205"	"21"	"30.000"	"23.000"	"0.0806721934437476"	"21"	"0.002871"	"0.02715"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADVLSVLR"	"[M].aDVLSVLR.[Q]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q4V8C8"	"Parafibromin OS=Rattus norvegicus OX=10116 GN=Cdc73 PE=2 SV=1"	"Q4V8C8"	"Parafibromin OS=Rattus norvegicus OX=10116 GN=Cdc73 PE=2 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"457.76907"	"914.53087"	"914.53056"	"0.34"	"0.00016"	"7/62"	"7"	"62"	"369807.874206543"	"HCD"	"MS2"	"53.65508"	"9.8"	"100.000"	"108.3529"	"37799"	"37799"	"37783"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.2"	""	"16.6"	""	"11.3"	""	"19.6"	""	"8.1"	"13.9"	"NoQuanLabels"	"205"	"35"	"30.000"	"23.000"	"0.00294255009657531"	"23"	"0"	"0.003002"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAALGAR"	"[R].qAALGAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"458.28149"	"915.55571"	"915.55733"	"-1.77"	"-0.00081"	"6/62"	"6"	"62"	"11534438.28302"	"HCD"	"MS2"	"33.12337"	"648.1"	"100.000"	"23.2571"	"4494"	"4494"	"4467"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"944.2"	""	"766.5"	""	"815.2"	""	"1186.6"	""	"1183.1"	"1252.5"	""	"230"	"26"	"30.000"	"23.000"	"0.0289532846692269"	""	"0.003111"	"0.03046"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAALGAR"	"[R].qAALGAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"458.28177"	"915.55626"	"915.55733"	"-1.17"	"-0.00053"	"6/62"	"6"	"62"	"14655825.4625854"	"HCD"	"MS2"	"6.977825"	"791.9"	"100.000"	"23.3491"	"4514"	"4514"	"4495"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1133.9"	""	"925.7"	""	"1015.2"	""	"1422.2"	""	"1452.1"	"1567.2"	""	"230"	"26"	"30.000"	"23.000"	"0.0288866939623602"	"20"	"0.002937"	"0.0277"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWVAWQR"	"[R].AWVAWQR.[H]"	""	"1"	"2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697; Q05820"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2; Putative lysozyme C-2 OS=Rattus norvegicus OX=10116 GN=Lyz2 PE=5 SV=1"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"458.74295"	"916.47862"	"916.47880"	"-0.19"	"-0.00009"	"5/52"	"5"	"52"	"1297549.77172852"	"HCD"	"MS2"	"32.33194"	"29.8"	"100.000"	"52.3323"	"16277"	"16277"	"16256"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.3"	""	"35.1"	""	"36.1"	""	"48.3"	""	"74.1"	"58.9"	"NoQuanLabels"	"277"	"29"	"31.000"	"24.000"	"0.0169609343598209"	""	"0.008437"	"0.1017"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALAEAR"	"[R].gALAEAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"458.77344"	"916.53960"	"916.54135"	"-1.91"	"-0.00087"	"4/48"	"4"	"48"	"14157745.7491455"	"HCD"	"MS2"	"7.662227"	"429.2"	"54.496"	"25.3830"	"5345"	"5345"	"5329"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"578.2"	""	"511.2"	""	"592.4"	""	"688.4"	""	"825.8"	"874.8"	""	"247"	"25"	"30.000"	"23.000"	"0.0371250423374587"	""	"0.004022"	"0.04299"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALAEAR"	"[R].gALAEAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"458.77411"	"916.54094"	"916.54135"	"-0.44"	"-0.00020"	"4/48"	"4"	"48"	"20579217.6693726"	"HCD"	"MS2"	"38.37299"	"981.7"	"90.989"	"25.1029"	"5230"	"5230"	"5210"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1313.0"	""	"1247.6"	""	"1338.6"	""	"1655.4"	""	"1802.0"	"1969.6"	""	"245"	"29"	"30.000"	"23.000"	"0.0160744487629852"	""	"0.0023"	"0.02343"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALAEAR"	"[R].gALAEAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"458.77420"	"916.54112"	"916.54135"	"-0.24"	"-0.00011"	"4/48"	"4"	"48"	"36064103.322876"	"HCD"	"MS2"	"28.3109"	"977.3"	"51.650"	"25.1995"	"5255"	"5255"	"5243"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1285.2"	""	"1273.5"	""	"1308.3"	""	"1673.1"	""	"1801.6"	"1940.9"	""	"245"	"29"	"30.000"	"23.000"	"0.0150707924424517"	""	"0.002379"	"0.02442"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLVGK"	"[M].aASLVGk.[K]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"458.78625"	"916.56523"	"916.56650"	"-1.38"	"-0.00063"	"5/48"	"5"	"48"	"3749504.94348145"	"HCD"	"MS2"	"5.482659"	"160.3"	"100.000"	"66.0060"	"21815"	"21815"	"21796"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"241.5"	""	"242.5"	""	"248.7"	""	"248.0"	""	"273.6"	"272.3"	""	"142"	"47"	"28.000"	"21.000"	"0.000133124610072787"	""	"0.007935"	"0.09709"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLVGK"	"[M].aASLVGk.[K]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"458.78629"	"916.56529"	"916.56650"	"-1.31"	"-0.00060"	"5/48"	"5"	"48"	"3299465.74804688"	"HCD"	"MS2"	"0"	"136.3"	"100.000"	"66.3603"	"21944"	"21944"	"21927"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"197.4"	""	"191.2"	""	"216.0"	""	"203.0"	""	"235.4"	"248.3"	""	"142"	"47"	"28.000"	"21.000"	"0.000139719926569186"	""	"0.008777"	"0.1137"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAK.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6047"	"0.0000"	"1"	"1"	"1"	"458.78635"	"916.56542"	"916.56650"	"-1.18"	"-0.00054"	"6/48"	"6"	"48"	"6984745.89874268"	"HCD"	"MS2"	"20.93763"	"193.5"	"100.000"	"35.6319"	"9492"	"9492"	"9471"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"223.3"	""	"217.3"	""	"224.1"	""	"398.0"	""	"377.5"	"399.7"	""	"142"	"43"	"28.000"	"21.000"	"0.000365812337653047"	""	"0.0003538"	"0.006675"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLVGK"	"[M].aASLVGk.[K]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"0"	"2"	"2"	"0.7115"	"0.0000"	"1"	"1"	"1"	"458.78638"	"916.56548"	"916.56650"	"-1.11"	"-0.00051"	"5/48"	"5"	"48"	"2688435.57733154"	"HCD"	"MS2"	"7.702056"	"116.4"	"100.000"	"66.0631"	"21823"	"21823"	"21801"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"184.0"	""	"174.1"	""	"168.0"	""	"186.8"	"0.6"	"191.1"	"196.3"	""	"142"	"52"	"28.000"	"21.000"	"4.1904276692201E-05"	""	"0.004942"	"0.05318"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].VADALAk.[A]"	"K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"458.78656"	"916.56584"	"916.56650"	"-0.71"	"-0.00033"	"6/48"	"6"	"48"	"36452328.9239502"	"HCD"	"MS2"	"6.713689"	"564.8"	"35.997"	"30.8452"	"7559"	"7559"	"7547"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"481.8"	""	"562.1"	""	"614.7"	""	"1213.4"	"0.3"	"1254.0"	"1247.8"	""	"142"	"60"	"28.000"	"21.000"	"7.48614696437794E-06"	""	"0.000936"	"0.01149"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].VADALAk.[A]"	"K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"458.78674"	"916.56621"	"916.56650"	"-0.31"	"-0.00014"	"6/48"	"6"	"48"	"33540708.072998"	"HCD"	"MS2"	"5.893376"	"686.6"	"47.458"	"30.8984"	"7569"	"7569"	"7552"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"609.6"	""	"690.4"	""	"740.7"	""	"1433.6"	""	"1538.2"	"1522.0"	""	"142"	"60"	"28.000"	"21.000"	"7.45175124343149E-06"	""	"0.0008629"	"0.01014"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSALNR"	"[R].aGSALNR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"459.27155"	"917.53581"	"917.53660"	"-0.85"	"-0.00039"	"6/50"	"6"	"50"	"30631610.6766357"	"HCD"	"MS2"	"4.803938"	"1010.1"	"61.381"	"22.2154"	"4068"	"4068"	"4051"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1956.9"	""	"1472.8"	""	"1503.9"	""	"1308.1"	""	"1630.9"	"1684.9"	""	"200"	"24"	"30.000"	"23.000"	"0.0380189396320561"	"22"	"0.004867"	"0.05216"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTGVVTR"	"[R].gTGVVTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"459.78162"	"918.55596"	"918.55700"	"-1.13"	"-0.00052"	"6/56"	"6"	"56"	"10061286.9819336"	"HCD"	"MS2"	"13.67475"	"517.9"	"72.297"	"22.4747"	"4173"	"4173"	"4154"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"767.9"	""	"733.7"	""	"749.6"	""	"824.3"	""	"868.5"	"963.3"	""	"147"	"27"	"28.000"	"21.000"	"0.0144639642293453"	""	"0.004676"	"0.05014"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTGVVTR"	"[R].gTGVVTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"1"	"459.78171"	"918.55614"	"918.55700"	"-0.93"	"-0.00043"	"5/56"	"5"	"56"	"7965583.55493164"	"HCD"	"MS2"	"19.87941"	"569.8"	"98.195"	"22.5300"	"4179"	"4179"	"4158"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"843.9"	""	"758.0"	""	"801.7"	""	"938.9"	""	"993.1"	"1067.5"	""	"147"	"20"	"28.000"	"21.000"	"0.0681219920183822"	""	"0.006189"	"0.07007"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGIVTR"	"[R].gSGIVTR.[CR]"	"N-Term(TMT6plex)"	"2"	"6"	"P39052; P18589"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1;Interferon-induced GTP-binding protein Mx2 OS=Rattus norvegicus OX=10116 GN=Mx2 PE=2 SV=1"	"P18588; P21575; P18590; P39052; Q08877; P18589"	"Interferon-induced GTP-binding protein Mx1 OS=Rattus norvegicus OX=10116 GN=Mx1 PE=1 SV=1; Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Interferon-induced GTP-binding protein Mx3 OS=Rattus norvegicus OX=10116 GN=Mx3 PE=2 SV=1; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2; Interferon-induced GTP-binding protein Mx2 OS=Rattus norvegicus OX=10116 GN=Mx2 PE=2 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"459.78247"	"918.55766"	"918.55700"	"0.73"	"0.00033"	"5/56"	"5"	"56"	"11772764.6635742"	"HCD"	"MS2"	"18.34175"	"454.7"	"55.087"	"24.3256"	"4921"	"4921"	"4906"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"607.9"	""	"606.8"	""	"634.2"	""	"750.2"	""	"842.3"	"872.4"	""	"140"	"14"	"28.000"	"21.000"	"0.27295939067358"	"19"	"0.00912"	"0.1185"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGTFGPGS"	"[K].aGTFGPGS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"461.74405"	"922.48082"	"922.48316"	"-2.54"	"-0.00117"	"5/68"	"5"	"68"	"1892563.7532959"	"HCD"	"MS2"	"21.10385"	"61.2"	"100.000"	"46.6663"	"13968"	"13968"	"13949"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"74.2"	""	"74.3"	""	"89.4"	""	"95.8"	"1.2"	"125.2"	"120.1"	""	"313"	"17"	"31.000"	"24.000"	"0.336135469201428"	"22"	"0.006189"	"0.07016"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPPAAR"	"[R].vSPPAAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16257"	"Translocator protein OS=Rattus norvegicus OX=10116 GN=Tspo PE=1 SV=1"	"P16257"	"Translocator protein OS=Rattus norvegicus OX=10116 GN=Tspo PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"463.78412"	"926.56096"	"926.56208"	"-1.21"	"-0.00056"	"6/48"	"6"	"48"	"8688720.27459717"	"HCD"	"MS2"	"22.95871"	"421.1"	"100.000"	"26.4319"	"5753"	"5753"	"5735"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"480.8"	""	"580.0"	""	"631.5"	""	"687.9"	""	"767.1"	"855.0"	""	"59"	"29"	"24.000"	"17.000"	"0.00416698575663713"	""	"0.001211"	"0.01441"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPPAAR"	"[R].vSPPAAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16257"	"Translocator protein OS=Rattus norvegicus OX=10116 GN=Tspo PE=1 SV=1"	"P16257"	"Translocator protein OS=Rattus norvegicus OX=10116 GN=Tspo PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"463.78418"	"926.56108"	"926.56208"	"-1.08"	"-0.00050"	"6/48"	"6"	"48"	"8835800.52618408"	"HCD"	"MS2"	"25.32508"	"408.6"	"94.888"	"26.3424"	"5733"	"5733"	"5713"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"472.6"	""	"568.1"	""	"611.3"	""	"658.8"	""	"755.0"	"811.7"	""	"59"	"23"	"24.000"	"17.000"	"0.0152342828935261"	""	"0.001886"	"0.02112"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPPAAR"	"[R].vSPPAAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16257"	"Translocator protein OS=Rattus norvegicus OX=10116 GN=Tspo PE=1 SV=1"	"P16257"	"Translocator protein OS=Rattus norvegicus OX=10116 GN=Tspo PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"463.78448"	"926.56169"	"926.56208"	"-0.42"	"-0.00019"	"6/48"	"6"	"48"	"6192405.94842529"	"HCD"	"MS2"	"13.65911"	"322.0"	"100.000"	"26.0232"	"5605"	"5605"	"5587"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"346.9"	""	"423.3"	""	"426.3"	""	"604.8"	""	"621.8"	"634.4"	""	"58"	"30"	"24.000"	"17.000"	"0.00312174911952652"	""	"0.0008629"	"0.01032"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPPAAR"	"[R].vSPPAAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16257"	"Translocator protein OS=Rattus norvegicus OX=10116 GN=Tspo PE=1 SV=1"	"P16257"	"Translocator protein OS=Rattus norvegicus OX=10116 GN=Tspo PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"463.78470"	"926.56212"	"926.56208"	"0.04"	"0.00002"	"6/48"	"6"	"48"	"5849679.62121582"	"HCD"	"MS2"	"13.07803"	"312.6"	"100.000"	"26.1313"	"5633"	"5633"	"5617"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"362.5"	""	"399.4"	""	"431.5"	""	"561.9"	""	"602.1"	"616.4"	""	"58"	"22"	"24.000"	"17.000"	"0.0185950777209697"	""	"0.001134"	"0.01379"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVPPGR"	"[K].sSVPPGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"464.77383"	"928.54039"	"928.54135"	"-1.03"	"-0.00048"	"6/50"	"6"	"50"	"4302908.75946045"	"HCD"	"MS2"	"19.35151"	"241.8"	"100.000"	"21.0900"	"3594"	"3594"	"3573"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"268.2"	""	"282.5"	""	"296.0"	""	"461.1"	""	"482.4"	"508.1"	""	"201"	"18"	"30.000"	"23.000"	"0.161869886335416"	"16"	"0.006769"	"0.07873"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVPPGR"	"[K].sSVPPGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"464.77390"	"928.54051"	"928.54135"	"-0.90"	"-0.00042"	"6/50"	"6"	"50"	"5186808.70605469"	"HCD"	"MS2"	"0"	"272.7"	"100.000"	"20.6198"	"3422"	"3422"	"3400"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"339.6"	""	"344.2"	""	"363.3"	""	"474.1"	""	"524.4"	"547.9"	""	"201"	"17"	"30.000"	"23.000"	"0.20566768599083"	"16"	"0.003967"	"0.04215"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVPPGR"	"[K].sSVPPGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"464.77399"	"928.54070"	"928.54135"	"-0.70"	"-0.00032"	"6/50"	"6"	"50"	"3648339.59234619"	"HCD"	"MS2"	"0"	"206.0"	"100.000"	"21.5186"	"3769"	"3769"	"3742"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"247.1"	""	"261.9"	""	"256.2"	""	"354.6"	""	"426.8"	"411.2"	""	"201"	"20"	"30.000"	"23.000"	"0.10166373515312"	"18"	"0.008052"	"0.0977"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADVIAGR"	"[K].aDVIAGR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYN4"	"Phytanoyl-CoA hydroxylase-interacting protein-like OS=Rattus norvegicus OX=10116 GN=Phyhipl PE=1 SV=2"	"Q6AYN4"	"Phytanoyl-CoA hydroxylase-interacting protein-like OS=Rattus norvegicus OX=10116 GN=Phyhipl PE=1 SV=2"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"465.78162"	"930.55596"	"930.55700"	"-1.12"	"-0.00052"	"6/48"	"6"	"48"	"4499112.20690918"	"HCD"	"MS2"	"28.73515"	"233.3"	"100.000"	"34.0107"	"8832"	"8832"	"8809"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"289.7"	""	"261.9"	""	"291.4"	""	"427.0"	""	"461.1"	"486.4"	""	"222"	"20"	"30.000"	"23.000"	"0.11703694549943"	""	"0.006769"	"0.07699"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADVIAGR"	"[K].aDVIAGR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYN4"	"Phytanoyl-CoA hydroxylase-interacting protein-like OS=Rattus norvegicus OX=10116 GN=Phyhipl PE=1 SV=2"	"Q6AYN4"	"Phytanoyl-CoA hydroxylase-interacting protein-like OS=Rattus norvegicus OX=10116 GN=Phyhipl PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"465.78165"	"930.55602"	"930.55700"	"-1.05"	"-0.00049"	"6/48"	"6"	"48"	"5155541.92584229"	"HCD"	"MS2"	"32.56623"	"279.5"	"100.000"	"33.9977"	"8833"	"8833"	"8808"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"329.2"	""	"327.7"	""	"351.4"	""	"507.7"	""	"568.1"	"569.6"	""	"222"	"18"	"30.000"	"23.000"	"0.182525261276857"	""	"0.008668"	"0.1111"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALAAER"	"[R].aALAAER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"0.3214"	"0.0000"	"1"	"1"	"1"	"465.78168"	"930.55608"	"930.55700"	"-0.99"	"-0.00046"	"5/48"	"5"	"48"	"18805450.1060791"	"HCD"	"MS2"	"8.060366"	"498.6"	"49.349"	"26.7213"	"5871"	"5871"	"5853"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"727.5"	""	"663.4"	""	"707.3"	""	"819.3"	"6.4"	"904.3"	"893.5"	""	"222"	"28"	"30.000"	"23.000"	"0.0185064440593168"	""	"0.002871"	"0.02689"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALAAER"	"[R].aALAAER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"465.78171"	"930.55614"	"930.55700"	"-0.92"	"-0.00043"	"5/48"	"5"	"48"	"19978817.9073486"	"HCD"	"MS2"	"5.537535"	"450.0"	"44.190"	"26.6449"	"5856"	"5856"	"5838"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"653.4"	""	"598.2"	""	"645.6"	""	"761.1"	""	"780.3"	"824.4"	""	"222"	"26"	"30.000"	"23.000"	"0.0306424142040458"	""	"0.002973"	"0.02826"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGLAVR"	"[R].dAGLAVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"465.78180"	"930.55632"	"930.55700"	"-0.72"	"-0.00034"	"6/48"	"6"	"48"	"12582522.963562"	"HCD"	"MS2"	"0.4974391"	"486.8"	"81.575"	"32.8396"	"8361"	"8361"	"8347"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"829.3"	""	"670.8"	""	"725.0"	""	"736.6"	""	"823.4"	"825.7"	""	"222"	"30"	"30.000"	"23.000"	"0.0113063644074007"	""	"0.003967"	"0.04178"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGLAVR"	"[R].dAGLAVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"465.78201"	"930.55675"	"930.55700"	"-0.27"	"-0.00012"	"5/48"	"5"	"48"	"10843914.2056274"	"HCD"	"MS2"	"0"	"517.5"	"100.000"	"32.8325"	"8364"	"8364"	"8350"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"876.9"	""	"708.3"	""	"738.9"	""	"801.9"	""	"869.0"	"905.7"	""	"222"	"29"	"30.000"	"23.000"	"0.0131015590557342"	""	"0.004942"	"0.05434"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLGVSGR"	"[R].nLGVSGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"1"	"466.28064"	"931.55400"	"931.55225"	"1.89"	"0.00088"	"6/60"	"6"	"60"	"11635037.3824463"	"HCD"	"MS2"	"24.93571"	"684.9"	"100.000"	"27.7630"	"6295"	"6295"	"6278"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"782.0"	""	"799.4"	""	"897.6"	""	"1208.2"	""	"1393.2"	"1434.8"	""	"194"	"20"	"29.000"	"22.000"	"0.09544907725883"	""	"0.003922"	"0.03975"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLGVSGR"	"[R].nLGVSGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"466.28131"	"931.55535"	"931.55225"	"3.33"	"0.00155"	"5/60"	"5"	"60"	"12473921.9443359"	"HCD"	"MS2"	"38.29101"	"715.4"	"100.000"	"27.7028"	"6285"	"6285"	"6263"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"795.3"	""	"851.1"	""	"887.7"	""	"1220.1"	""	"1508.0"	"1538.8"	""	"178"	"21"	"29.000"	"22.000"	"0.0748841676064224"	""	"0.003922"	"0.03966"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAPTVIT"	"[R].tAPTVIT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"466.28653"	"931.56578"	"931.56616"	"-0.41"	"-0.00019"	"6/62"	"6"	"62"	"3654012.11499023"	"HCD"	"MS2"	"14.14865"	"60.7"	"100.000"	"53.7799"	"16868"	"16868"	"16848"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.7"	"2.8"	"78.7"	""	"82.1"	""	"107.3"	""	"103.4"	"126.8"	""	"150"	"42"	"28.000"	"21.000"	"0.000457152672930127"	"18"	"0.0008629"	"0.009538"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAPTVIT"	"[R].tAPTVIT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"466.28656"	"931.56584"	"931.56616"	"-0.34"	"-0.00016"	"6/62"	"6"	"62"	"3130466.62463379"	"HCD"	"MS2"	"18.80291"	"58.6"	"100.000"	"53.5121"	"16770"	"16770"	"16748"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"73.6"	"2.4"	"79.7"	""	"78.3"	""	"95.1"	""	"96.5"	"135.1"	""	"145"	"37"	"28.000"	"21.000"	"0.00131322156714921"	"17"	"0.001635"	"0.01979"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGATER"	"[K].iGGATER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"3"	"466.77121"	"932.53514"	"932.53626"	"-1.20"	"-0.00056"	"6/50"	"6"	"50"	"7987352.49084473"	"HCD"	"MS2"	"11.40602"	"488.9"	"100.000"	"23.6153"	"4640"	"4640"	"4618"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"629.0"	""	"632.3"	""	"609.2"	""	"803.2"	"7.0"	"953.1"	"1005.6"	""	"241"	"21"	"30.000"	"23.000"	"0.101154928375587"	""	"0.008668"	"0.1107"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GDSVGLR"	"[K].gDSVGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.0385"	"0.0000"	"1"	"1"	"1"	"466.77130"	"932.53533"	"932.53626"	"-1.00"	"-0.00047"	"6/50"	"6"	"50"	"5823621.05279541"	"HCD"	"MS2"	"17.07647"	"331.6"	"100.000"	"29.0920"	"6836"	"6836"	"6811"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"449.0"	""	"419.1"	""	"472.7"	""	"522.9"	"2.8"	"619.7"	"657.0"	""	"241"	"26"	"30.000"	"23.000"	"0.0271635825064368"	""	"0.003189"	"0.03222"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDSVGLR"	"[K].gDSVGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"466.77139"	"932.53551"	"932.53626"	"-0.81"	"-0.00038"	"6/50"	"6"	"50"	"5166628.42523193"	"HCD"	"MS2"	"20.07123"	"285.6"	"100.000"	"29.0226"	"6820"	"6820"	"6800"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"376.1"	""	"396.1"	""	"394.7"	""	"448.2"	"0.5"	"507.9"	"583.6"	""	"239"	"26"	"30.000"	"23.000"	"0.0282077148865079"	""	"0.001886"	"0.02102"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAGEASR"	"[R].iAGEASR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00729"	"Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"Q00729"	"Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"466.77219"	"932.53710"	"932.53626"	"0.90"	"0.00042"	"5/52"	"5"	"52"	"33361650.9752197"	"HCD"	"MS2"	"10.60468"	"729.0"	"38.031"	"23.3056"	"4514"	"4514"	"4499"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"655.9"	""	"671.2"	""	"660.0"	""	"1330.5"	""	"1821.4"	"1826.0"	""	"240"	"24"	"30.000"	"23.000"	"0.0430706321574006"	""	"0.00447"	"0.0481"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAGEASR"	"[R].iAGEASR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00729"	"Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"Q00729"	"Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"466.77237"	"932.53746"	"932.53626"	"1.29"	"0.00060"	"6/52"	"6"	"52"	"27938559.2885742"	"HCD"	"MS2"	"12.72001"	"821.6"	"49.210"	"23.3424"	"4512"	"4512"	"4495"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"756.7"	""	"775.8"	""	"770.6"	""	"1457.4"	""	"2051.4"	"2037.8"	""	"237"	"25"	"30.000"	"23.000"	"0.0406179827057544"	""	"0.003967"	"0.04169"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVSTGVK"	"[M].aVSTGVk.[V]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"466.78397"	"932.56066"	"932.56141"	"-0.81"	"-0.00038"	"5/50"	"5"	"50"	"6324503.26989746"	"HCD"	"MS2"	"6.31703"	"283.4"	"100.000"	"41.8400"	"12018"	"12018"	"12001"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"410.8"	""	"385.8"	""	"414.8"	""	"448.9"	""	"499.9"	"528.2"	""	"220"	"42"	"30.000"	"23.000"	"0.000644751980965431"	""	"0.00379"	"0.0389"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVSTGVK"	"[M].aVSTGVk.[V]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"466.78400"	"932.56072"	"932.56141"	"-0.75"	"-0.00035"	"5/50"	"5"	"50"	"5384325.70825195"	"HCD"	"MS2"	"15.41348"	"243.6"	"100.000"	"41.9462"	"12051"	"12051"	"12033"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"369.2"	""	"333.0"	""	"362.5"	""	"371.6"	""	"437.3"	"433.7"	""	"220"	"42"	"30.000"	"23.000"	"0.000665874962229305"	""	"0.002973"	"0.02899"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GADGVMR"	"[RK].gADGVMR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"Q05140"	"Clathrin coat assembly protein AP180 OS=Rattus norvegicus OX=10116 GN=Snap91 PE=1 SV=1"	"O55012; Q05140"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1; Clathrin coat assembly protein AP180 OS=Rattus norvegicus OX=10116 GN=Snap91 PE=1 SV=1"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"467.75204"	"934.49681"	"934.49777"	"-1.02"	"-0.00048"	"9/48"	"9"	"48"	"6053794.34869385"	"HCD"	"MS2"	"17.26517"	"363.8"	"100.000"	"25.2430"	"5287"	"5287"	"5267"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"497.9"	""	"501.0"	""	"493.9"	""	"543.8"	""	"705.5"	"711.4"	""	"302"	"29"	"31.000"	"24.000"	"0.0181124394775556"	""	"0.001886"	"0.0215"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GADGVMR"	"[RK].gADGVMR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"Q05140"	"Clathrin coat assembly protein AP180 OS=Rattus norvegicus OX=10116 GN=Snap91 PE=1 SV=1"	"O55012; Q05140"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1; Clathrin coat assembly protein AP180 OS=Rattus norvegicus OX=10116 GN=Snap91 PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"467.75220"	"934.49712"	"934.49777"	"-0.69"	"-0.00032"	"5/48"	"5"	"48"	"3660685.68347168"	"HCD"	"MS2"	"15.17892"	"264.7"	"100.000"	"25.3764"	"5327"	"5327"	"5302"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"339.9"	""	"300.6"	""	"338.7"	""	"419.4"	""	"566.7"	"551.9"	""	"318"	"20"	"32.000"	"25.000"	"0.148387433826722"	"20"	"0.007087"	"0.08208"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAYGVR"	"[R].aAAYGVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"468.77505"	"936.54283"	"936.54643"	"-3.84"	"-0.00180"	"5/50"	"5"	"50"	"3492129.74847412"	"HCD"	"MS2"	"34.18242"	"297.2"	"100.000"	"28.1090"	"6450"	"6450"	"6430"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"459.9"	""	"415.7"	""	"392.3"	""	"421.5"	""	"547.2"	"584.1"	""	"88"	"22"	"26.000"	"19.000"	"0.028605706375096"	"14"	"0.00263"	"0.02553"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAYGVR"	"[R].aAAYGVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"468.77615"	"936.54503"	"936.54643"	"-1.50"	"-0.00070"	"5/50"	"5"	"50"	"2659627.83770752"	"HCD"	"MS2"	"35.67302"	"183.5"	"100.000"	"28.1024"	"6433"	"6433"	"6417"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"284.7"	""	"258.8"	""	"246.8"	""	"298.5"	""	"341.2"	"309.8"	""	"80"	"27"	"26.000"	"19.000"	"0.00771009965276375"	"14"	"0.000936"	"0.01188"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAYAAR"	"[R].sAAYAAR.[W]"	"N-Term(TMT6plex)"	"1"	"2"	"P13444"	"S-adenosylmethionine synthase isoform type-1 OS=Rattus norvegicus OX=10116 GN=Mat1a PE=1 SV=2"	"P13444; P18298"	"S-adenosylmethionine synthase isoform type-1 OS=Rattus norvegicus OX=10116 GN=Mat1a PE=1 SV=2; S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"469.76535"	"938.52342"	"938.52570"	"-2.42"	"-0.00114"	"5/48"	"5"	"48"	"10848345.1182251"	"HCD"	"MS2"	"7.043242"	"624.5"	"100.000"	"21.8804"	"3932"	"3932"	"3914"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"951.7"	""	"900.3"	""	"978.4"	""	"924.7"	""	"1086.8"	"1067.5"	""	"149"	"30"	"28.000"	"21.000"	"0.00667046750334447"	""	"0.002871"	"0.0272"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVADAIR"	"[K].aVADAIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"472.78934"	"944.57140"	"944.57265"	"-1.32"	"-0.00062"	"9/48"	"9"	"48"	"9433451.41241455"	"HCD"	"MS2"	"18.11633"	"470.3"	"100.000"	"34.9754"	"9229"	"9229"	"9210"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"644.5"	""	"584.4"	""	"569.3"	""	"855.6"	""	"927.7"	"882.1"	""	"197"	"35"	"29.000"	"22.000"	"0.00293383868298775"	""	"0.0008629"	"0.01072"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEAAVR"	"[R].lGEAAVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"0"	"2"	"2"	"0.2632"	"0.0000"	"1"	"1"	"1"	"472.78940"	"944.57152"	"944.57265"	"-1.19"	"-0.00056"	"9/48"	"9"	"48"	"5524256.93334961"	"HCD"	"MS2"	"19.14391"	"270.9"	"100.000"	"33.9221"	"8796"	"8796"	"8777"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"395.1"	""	"379.1"	""	"395.9"	""	"427.8"	""	"459.9"	"509.0"	""	"197"	"19"	"29.000"	"22.000"	"0.125729222667917"	""	"0.003922"	"0.04004"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIVDAAR"	"[R].aIVDAAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"472.78955"	"944.57182"	"944.57265"	"-0.87"	"-0.00041"	"9/48"	"9"	"48"	"4285885.41308594"	"HCD"	"MS2"	"21.80806"	"222.5"	"100.000"	"32.7224"	"8313"	"8313"	"8289"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"319.5"	""	"278.7"	""	"293.7"	""	"357.0"	""	"438.0"	"426.0"	""	"197"	"32"	"29.000"	"22.000"	"0.00590794210111677"	""	"0.001211"	"0.0155"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVGDGR"	"[R].lVVGDGR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P22062"	"Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Pcmt1 PE=1 SV=2"	"P22062"	"Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Pcmt1 PE=1 SV=2"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"3"	"472.78958"	"944.57189"	"944.57265"	"-0.80"	"-0.00038"	"9/48"	"9"	"48"	"5580329.66351318"	"HCD"	"MS2"	"29.23087"	"283.2"	"96.441"	"39.4654"	"11042"	"11042"	"11025"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"365.7"	""	"333.7"	""	"384.6"	""	"467.9"	""	"563.1"	"573.8"	""	"197"	"8"	"29.000"	"22.000"	"1.71963482062669"	"20"	"0.005427"	"0.06173"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIVDAAR"	"[R].aIVDAAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"472.78961"	"944.57195"	"944.57265"	"-0.74"	"-0.00035"	"5/48"	"5"	"48"	"5538061.60119629"	"HCD"	"MS2"	"11.01213"	"281.5"	"100.000"	"32.7266"	"8321"	"8321"	"8302"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"396.5"	""	"362.3"	""	"386.3"	""	"499.4"	""	"505.7"	"523.5"	""	"197"	"31"	"29.000"	"22.000"	"0.00771678198124718"	""	"0.001211"	"0.01424"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEAAVR"	"[R].lGEAAVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"0"	"2"	"2"	"0.2632"	"0.0000"	"1"	"1"	"1"	"472.78964"	"944.57201"	"944.57265"	"-0.68"	"-0.00032"	"9/48"	"9"	"48"	"6277160.17120361"	"HCD"	"MS2"	"18.22338"	"302.2"	"100.000"	"33.9051"	"8799"	"8799"	"8779"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"434.8"	""	"399.7"	""	"447.0"	""	"477.8"	"4.6"	"498.1"	"599.0"	""	"197"	"19"	"29.000"	"22.000"	"0.124290012157181"	""	"0.004022"	"0.04265"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVADAIR"	"[K].aVADAIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.4062"	"0.0000"	"1"	"1"	"1"	"472.78970"	"944.57213"	"944.57265"	"-0.55"	"-0.00026"	"5/48"	"5"	"48"	"9165763.87750244"	"HCD"	"MS2"	"17.44468"	"442.4"	"100.000"	"35.0597"	"9258"	"9258"	"9239"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"598.8"	""	"545.4"	""	"535.2"	""	"806.1"	""	"856.7"	"862.9"	""	"197"	"32"	"29.000"	"22.000"	"0.00638904917045015"	""	"0.0008629"	"0.01104"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGSGVER"	"[R].iGSGVER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"473.77911"	"946.55095"	"946.55191"	"-1.01"	"-0.00048"	"4/54"	"4"	"54"	"7947585.88562012"	"HCD"	"MS2"	"15.63621"	"387.5"	"100.000"	"27.8570"	"6333"	"6333"	"6310"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"501.3"	""	"419.8"	""	"351.3"	""	"793.0"	""	"833.8"	"784.9"	""	"263"	"21"	"31.000"	"24.000"	"0.0935245770454128"	"20"	"0.003653"	"0.03781"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGSGVER"	"[R].iGSGVER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"473.77917"	"946.55107"	"946.55191"	"-0.89"	"-0.00042"	"5/54"	"5"	"54"	"7360396.99450684"	"HCD"	"MS2"	"19.96404"	"396.1"	"100.000"	"27.7648"	"6310"	"6310"	"6295"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"514.1"	""	"418.9"	""	"374.4"	""	"820.0"	"1.4"	"848.8"	"784.9"	""	"263"	"20"	"31.000"	"24.000"	"0.142864969505644"	"19"	"0.008668"	"0.1114"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANPSAFL"	"[R].aNPSAFL.[-]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5U1V9"	"Tetraspanin-31 OS=Rattus norvegicus OX=10116 GN=Tspan31 PE=2 SV=1"	"Q5U1V9; Q5FVL6"	"Tetraspanin-31 OS=Rattus norvegicus OX=10116 GN=Tspan31 PE=2 SV=1; Tetraspanin-13 OS=Rattus norvegicus OX=10116 GN=Tspan13 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"474.77200"	"948.53673"	"948.53520"	"1.61"	"0.00077"	"5/48"	"5"	"48"	"466700.553100586"	"HCD"	"MS2"	"11.46895"	"17.2"	"100.000"	"86.9834"	"30252"	"30252"	"30231"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.7"	""	"19.5"	""	"21.8"	""	"32.1"	""	"29.1"	"34.5"	""	"284"	"14"	"31.000"	"24.000"	"0.565312182185966"	"13"	"0.007808"	"0.0959"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGNTSR"	"[R].vSGNTSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"475.26550"	"949.52373"	"949.52642"	"-2.84"	"-0.00135"	"6/62"	"6"	"62"	"4139154.04937744"	"HCD"	"MS2"	"0"	"248.3"	"100.000"	"19.1568"	"2852"	"2852"	"2837"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"349.5"	""	"211.8"	""	"161.1"	""	"536.7"	""	"563.7"	"540.2"	""	"240"	"26"	"30.000"	"23.000"	"0.0286537353949581"	"21"	"0.005309"	"0.05978"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGNTSR"	"[R].vSGNTSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"475.26617"	"949.52507"	"949.52642"	"-1.42"	"-0.00068"	"6/62"	"6"	"62"	"3777507.03460693"	"HCD"	"MS2"	"0"	"239.6"	"100.000"	"19.2079"	"2869"	"2869"	"2856"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"333.4"	""	"184.8"	""	"162.7"	""	"522.1"	""	"544.1"	"535.6"	""	"241"	"26"	"30.000"	"23.000"	"0.0316218334477825"	"20"	"0.003922"	"0.03973"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNITSLS"	"[R].sNITSLS.[-]"	"N-Term(TMT6plex)"	"1"	"2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62951; Q62952"	"Dihydropyrimidinase-related protein 4 (Fragment) OS=Rattus norvegicus OX=10116 GN=Dpysl4 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"475.77087"	"950.53447"	"950.53559"	"-1.18"	"-0.00056"	"5/60"	"5"	"60"	"1191609.88824463"	"HCD"	"MS2"	"12.22648"	"39.1"	"100.000"	"52.6053"	"16400"	"16400"	"16376"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.8"	""	"47.4"	""	"52.2"	""	"79.2"	"1.1"	"77.9"	"68.7"	""	"206"	"30"	"30.000"	"23.000"	"0.0111387696983688"	""	"0.005874"	"0.06559"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNITSLS"	"[R].sNITSLS.[-]"	"N-Term(TMT6plex)"	"1"	"2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62951; Q62952"	"Dihydropyrimidinase-related protein 4 (Fragment) OS=Rattus norvegicus OX=10116 GN=Dpysl4 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"475.77097"	"950.53465"	"950.53559"	"-0.99"	"-0.00047"	"5/60"	"5"	"60"	"1435468.19677734"	"HCD"	"MS2"	"33.67287"	"48.8"	"100.000"	"52.5556"	"16368"	"16368"	"16345"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.6"	""	"62.7"	""	"65.6"	""	"105.3"	""	"93.7"	"88.0"	""	"206"	"27"	"30.000"	"23.000"	"0.0196714885632322"	""	"0.004867"	"0.05182"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNITSLS"	"[R].sNITSLS.[-]"	"N-Term(TMT6plex)"	"1"	"2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62951; Q62952"	"Dihydropyrimidinase-related protein 4 (Fragment) OS=Rattus norvegicus OX=10116 GN=Dpysl4 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"475.77115"	"950.53502"	"950.53559"	"-0.60"	"-0.00029"	"5/60"	"5"	"60"	"1122120.82653809"	"HCD"	"MS2"	"24.34712"	"40.1"	"100.000"	"52.8616"	"16493"	"16493"	"16471"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.0"	""	"46.4"	""	"51.7"	""	"95.1"	""	"74.0"	"69.2"	""	"206"	"25"	"30.000"	"23.000"	"0.0344220891226898"	""	"0.007686"	"0.09413"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNITSLS"	"[R].sNITSLS.[-]"	"N-Term(TMT6plex)"	"1"	"2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62951; Q62952"	"Dihydropyrimidinase-related protein 4 (Fragment) OS=Rattus norvegicus OX=10116 GN=Dpysl4 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"475.77155"	"950.53581"	"950.53559"	"0.23"	"0.00011"	"5/60"	"5"	"60"	"1550341.59326172"	"HCD"	"MS2"	"29.41407"	"55.4"	"100.000"	"52.2970"	"16274"	"16274"	"16251"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.1"	""	"66.4"	""	"69.4"	""	"128.7"	"0.6"	"113.4"	"85.7"	""	"211"	"24"	"30.000"	"23.000"	"0.0456302091741934"	""	"0.005874"	"0.06566"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGGVGR"	"[R].yNGGVGR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"476.26392"	"951.52056"	"951.52095"	"-0.41"	"-0.00019"	"6/60"	"6"	"60"	"9931138.9666748"	"HCD"	"MS2"	"5.105158"	"555.9"	"100.000"	"24.0215"	"4805"	"4805"	"4783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"889.3"	""	"816.2"	""	"834.8"	""	"863.8"	"8.3"	"976.0"	"869.8"	""	"201"	"15"	"30.000"	"23.000"	"0.306313446457612"	"18"	"0.004867"	"0.05217"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGGVGR"	"[R].yNGGVGR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"476.26413"	"951.52098"	"951.52095"	"0.04"	"0.00002"	"6/60"	"6"	"60"	"9315900.54077148"	"HCD"	"MS2"	"0"	"486.2"	"100.000"	"24.1083"	"4818"	"4818"	"4789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"794.9"	""	"722.9"	""	"762.5"	""	"752.3"	"13.1"	"799.1"	"750.1"	""	"201"	"16"	"30.000"	"23.000"	"0.245564770545744"	"18"	"0.004942"	"0.05343"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVGYDV"	"[R].gIVGYDV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"476.27078"	"951.53429"	"951.53486"	"-0.60"	"-0.00029"	"6/50"	"6"	"50"	"6938700.18859863"	"HCD"	"MS2"	"45.07301"	"70.9"	"100.000"	"81.6103"	"28133"	"28133"	"28116"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.2"	""	"90.3"	""	"97.0"	""	"128.7"	""	"134.0"	"143.9"	""	"151"	"36"	"28.000"	"21.000"	"0.00194064881599049"	"17"	"0.000936"	"0.01225"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVGYDV"	"[R].gIVGYDV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"476.27084"	"951.53441"	"951.53486"	"-0.48"	"-0.00023"	"6/50"	"6"	"50"	"4223399.3626709"	"HCD"	"MS2"	"52.93409"	"43.3"	"100.000"	"81.5266"	"28096"	"28096"	"28080"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.2"	""	"63.3"	""	"51.9"	""	"77.0"	""	"80.1"	"87.2"	""	"151"	"36"	"28.000"	"21.000"	"0.00205563948759882"	"17"	"0.000936"	"0.01247"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVGYDV"	"[R].gIVGYDV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"476.27121"	"951.53514"	"951.53486"	"0.29"	"0.00014"	"4/50"	"4"	"50"	"674289.783569336"	"HCD"	"MS2"	"60.61311"	"21.8"	"100.000"	"82.2512"	"28389"	"28389"	"28370"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.8"	""	"22.0"	""	"20.5"	""	"52.1"	""	"29.5"	"52.1"	""	"148"	"4"	"28.000"	"21.000"	"3.22278786527321"	"13"	"0.007627"	"0.09171"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFGTGK"	"[M].sSFGTGk.[T]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"477.75784"	"954.50841"	"954.50938"	"-1.01"	"-0.00048"	"6/56"	"6"	"56"	"7010174.14868164"	"HCD"	"MS2"	"4.044935"	"271.9"	"100.000"	"44.6719"	"13155"	"13155"	"13139"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"400.2"	""	"376.3"	""	"408.4"	""	"416.9"	""	"479.2"	"497.6"	""	"136"	"29"	"28.000"	"21.000"	"0.0082700648043953"	"21"	"0.004942"	"0.05285"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAIPGR"	"[K].tDAIPGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"479.77896"	"958.55065"	"958.55191"	"-1.32"	"-0.00063"	"5/50"	"5"	"50"	"22586349.3139038"	"HCD"	"MS2"	"0.807884"	"723.4"	"75.856"	"31.6472"	"7883"	"7883"	"7868"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"795.0"	""	"1067.3"	""	"1072.7"	""	"1117.1"	""	"1320.5"	"1494.3"	""	"392"	"25"	"32.000"	"25.000"	"0.0565270174612814"	""	"0.004606"	"0.0499"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAIPGR"	"[K].tDAIPGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"479.77927"	"958.55126"	"958.55191"	"-0.68"	"-0.00033"	"5/50"	"5"	"50"	"23483949.4567261"	"HCD"	"MS2"	"0.4113522"	"684.8"	"65.755"	"31.6709"	"7884"	"7884"	"7869"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"769.4"	""	"995.9"	""	"995.9"	""	"1065.9"	""	"1233.9"	"1443.8"	""	"323"	"25"	"32.000"	"25.000"	"0.0461500872755053"	""	"0.003967"	"0.04152"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVAVIR"	"[K].gDVAVIR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"479.79739"	"958.58751"	"958.58830"	"-0.82"	"-0.00039"	"4/48"	"4"	"48"	"5185248.2543335"	"HCD"	"MS2"	"0"	"248.2"	"100.000"	"37.8454"	"10391"	"10391"	"10372"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"373.2"	""	"355.6"	""	"321.5"	""	"412.3"	"0.2"	"441.0"	"446.2"	""	"202"	"24"	"30.000"	"23.000"	"0.0450112810881478"	""	"0.002147"	"0.02285"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVAVIR"	"[K].gDVAVIR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"479.79752"	"958.58776"	"958.58830"	"-0.56"	"-0.00027"	"4/48"	"4"	"48"	"3998986.4786377"	"HCD"	"MS2"	"6.883069"	"186.5"	"100.000"	"37.9819"	"10439"	"10439"	"10423"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"266.7"	""	"259.2"	""	"255.7"	""	"319.6"	""	"332.0"	"334.1"	""	"202"	"25"	"30.000"	"23.000"	"0.029330628810091"	"20"	"0.003111"	"0.03082"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMPVTAR"	"[K].gMPVTAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"480.77829"	"960.54930"	"960.54980"	"-0.52"	"-0.00025"	"10/48"	"10"	"48"	"22074573.4400635"	"HCD"	"MS2"	"0"	"524.5"	"48.248"	"30.4370"	"7395"	"7395"	"7379"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"773.4"	""	"752.3"	""	"856.3"	""	"505.5"	""	"955.2"	"1134.0"	""	"433"	"20"	"33.000"	"26.000"	"0.228800990744757"	"23"	"0.006958"	"0.08117"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMPVTAR"	"[K].gMPVTAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"480.77850"	"960.54973"	"960.54980"	"-0.08"	"-0.00004"	"6/48"	"6"	"48"	"17675645.0317383"	"HCD"	"MS2"	"0"	"509.1"	"58.287"	"30.4854"	"7403"	"7403"	"7386"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"760.3"	""	"745.1"	""	"783.5"	""	"531.6"	"1.4"	"905.6"	"1096.0"	""	"431"	"22"	"33.000"	"26.000"	"0.127188332777032"	"23"	"0.005829"	"0.06518"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMPVTAR"	"[K].gMPVTAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"480.77856"	"960.54985"	"960.54980"	"0.05"	"0.00002"	"6/48"	"6"	"48"	"16517920.0442505"	"HCD"	"MS2"	"10.81542"	"753.5"	"100.000"	"30.1340"	"7271"	"7271"	"7257"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1167.9"	""	"1102.5"	""	"1157.7"	""	"801.4"	"7.8"	"1334.7"	"1565.2"	""	"431"	"19"	"33.000"	"26.000"	"0.260883897780129"	"26"	"0.005921"	"0.06735"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMPVTAR"	"[K].gMPVTAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"480.77878"	"960.55028"	"960.54980"	"0.50"	"0.00024"	"6/48"	"6"	"48"	"18009056.0991211"	"HCD"	"MS2"	"6.200807"	"919.9"	"100.000"	"30.1779"	"7277"	"7277"	"7263"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1401.7"	""	"1375.1"	""	"1446.5"	""	"971.5"	"9.5"	"1642.9"	"1866.0"	""	"431"	"19"	"33.000"	"26.000"	"0.258492099828691"	"26"	"0.005874"	"0.06696"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLASIR"	"[R].gDLASIR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.0769"	"0.0000"	"1"	"1"	"1"	"480.78665"	"960.56603"	"960.56756"	"-1.60"	"-0.00077"	"6/54"	"6"	"54"	"15908482.2359619"	"HCD"	"MS2"	"7.180215"	"684.6"	"87.534"	"41.2433"	"11765"	"11765"	"11752"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1037.3"	""	"776.4"	""	"968.4"	""	"1154.6"	""	"1153.8"	"1408.2"	""	"377"	"26"	"32.000"	"25.000"	"0.0461648421087735"	""	"0.004938"	"0.05268"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLASIR"	"[R].gDLASIR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.0769"	"0.0000"	"1"	"1"	"1"	"480.78674"	"960.56621"	"960.56756"	"-1.41"	"-0.00068"	"6/54"	"6"	"54"	"16409633.2226563"	"HCD"	"MS2"	"5.590372"	"787.5"	"100.000"	"41.0820"	"11710"	"11710"	"11693"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1218.3"	""	"920.5"	""	"1094.4"	""	"1328.9"	""	"1308.8"	"1590.1"	""	"377"	"26"	"32.000"	"25.000"	"0.0458470455710414"	""	"0.004069"	"0.04382"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVSAGER"	"[R].iVSAGER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4K5"	"Lethal(2) giant larvae protein homolog 1 OS=Rattus norvegicus OX=10116 GN=Llgl1 PE=1 SV=1"	"Q8K4K5"	"Lethal(2) giant larvae protein homolog 1 OS=Rattus norvegicus OX=10116 GN=Llgl1 PE=1 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"480.78683"	"960.56639"	"960.56756"	"-1.22"	"-0.00058"	"5/54"	"5"	"54"	"5257116.31817627"	"HCD"	"MS2"	"12.79856"	"323.0"	"100.000"	"28.5725"	"6638"	"6638"	"6624"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"420.1"	""	"427.6"	""	"442.0"	""	"534.0"	"18.1"	"593.9"	"626.5"	""	"377"	"19"	"32.000"	"25.000"	"0.238952376714204"	"23"	"0.007602"	"0.08993"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGLAER"	"[R].sVGLAER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"B3DMA2"	"Acyl-CoA dehydrogenase family member 11 OS=Rattus norvegicus OX=10116 GN=Acad11 PE=1 SV=1"	"B3DMA2"	"Acyl-CoA dehydrogenase family member 11 OS=Rattus norvegicus OX=10116 GN=Acad11 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"480.78714"	"960.56700"	"960.56756"	"-0.58"	"-0.00028"	"6/58"	"6"	"58"	"3901242.54553223"	"HCD"	"MS2"	"51.30853"	"314.1"	"100.000"	"31.0363"	"7624"	"7624"	"7604"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"421.3"	""	"358.5"	""	"387.7"	""	"533.2"	"10.2"	"604.3"	"669.9"	""	"315"	"18"	"31.000"	"24.000"	"0.240591654172496"	"24"	"0.004431"	"0.04655"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLPTSR"	"[K].aSLPTSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD6"	"PDZ and LIM domain protein 2 OS=Rattus norvegicus OX=10116 GN=Pdlim2 PE=1 SV=1"	"Q6AYD6"	"PDZ and LIM domain protein 2 OS=Rattus norvegicus OX=10116 GN=Pdlim2 PE=1 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"480.78754"	"960.56780"	"960.56756"	"0.25"	"0.00012"	"5/56"	"5"	"56"	"2239976.27874756"	"HCD"	"MS2"	"20.4476"	"143.9"	"100.000"	"29.5598"	"7038"	"7038"	"7019"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"174.8"	""	"153.8"	""	"175.3"	""	"296.2"	""	"301.3"	"266.4"	""	"309"	"17"	"31.000"	"24.000"	"0.299866868088084"	"21"	"0.00912"	"0.1184"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLQSGDR"	"[R].gLQSGDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.2105"	"0.0000"	"1"	"1"	"1"	"481.26651"	"961.52574"	"961.52642"	"-0.71"	"-0.00034"	"6/60"	"6"	"60"	"14465988.4896851"	"HCD"	"MS2"	"16.64772"	"926.2"	"89.012"	"21.1789"	"3648"	"3648"	"3627"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1172.7"	""	"1090.9"	""	"1111.6"	""	"1618.7"	"62.3"	"1825.0"	"1910.6"	""	"319"	"19"	"32.000"	"25.000"	"0.187396160012855"	""	"0.007413"	"0.08812"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLQSGDR"	"[R].gLQSGDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.2273"	"0.0000"	"1"	"1"	"1"	"481.26654"	"961.52580"	"961.52642"	"-0.64"	"-0.00031"	"6/60"	"6"	"60"	"13571998.3134155"	"HCD"	"MS2"	"13.13704"	"993.7"	"100.000"	"21.2321"	"3652"	"3652"	"3627"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1261.4"	""	"1133.6"	""	"1207.5"	""	"1779.1"	"70.3"	"1925.2"	"2054.9"	""	"319"	"22"	"32.000"	"25.000"	"0.1093353721192"	""	"0.006769"	"0.07812"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLTGTAR"	"[K].nLTGTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"2"	"P97633"	"Casein kinase I isoform alpha OS=Rattus norvegicus OX=10116 GN=Csnk1a1 PE=2 SV=1"	"Q06486; P97633"	"Casein kinase I isoform delta OS=Rattus norvegicus OX=10116 GN=Csnk1d PE=1 SV=2; Casein kinase I isoform alpha OS=Rattus norvegicus OX=10116 GN=Csnk1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"481.28448"	"961.56169"	"961.56281"	"-1.16"	"-0.00056"	"5/64"	"5"	"64"	"3328839.30377197"	"HCD"	"MS2"	"8.617604"	"237.0"	"100.000"	"23.6865"	"4669"	"4669"	"4649"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"334.2"	""	"328.7"	""	"339.2"	""	"413.8"	"4.7"	"417.1"	"406.2"	""	"254"	"19"	"31.000"	"24.000"	"0.153039564427218"	"18"	"0.004431"	"0.04638"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSGLVGR"	"[R].sGSGLVGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"481.28476"	"961.56224"	"961.56281"	"-0.59"	"-0.00028"	"12/60"	"12"	"60"	"11303558.4180298"	"HCD"	"MS2"	"46.99739"	"678.0"	"100.000"	"25.5735"	"5421"	"5421"	"5406"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1008.5"	""	"997.8"	""	"845.4"	""	"1121.5"	"8.7"	"1252.3"	"1187.9"	""	"241"	"14"	"30.000"	"23.000"	"0.510489774089697"	"18"	"0.0004639"	"0.008035"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSGLVGR"	"[R].sGSGLVGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"481.28482"	"961.56236"	"961.56281"	"-0.46"	"-0.00022"	"12/60"	"12"	"60"	"11425234.3398438"	"HCD"	"MS2"	"44.5988"	"653.8"	"100.000"	"25.6564"	"5440"	"5440"	"5425"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"973.1"	""	"951.3"	""	"818.8"	""	"1045.8"	""	"1206.6"	"1199.3"	""	"241"	"18"	"30.000"	"23.000"	"0.192303437242026"	"17"	"0.0004639"	"0.007764"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSMPGVR"	"[R].sSMPGVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"481.76715"	"962.52703"	"962.52907"	"-2.12"	"-0.00102"	"6/50"	"6"	"50"	"7641029.26470947"	"HCD"	"MS2"	"21.17217"	"420.5"	"100.000"	"28.7704"	"6705"	"6705"	"6687"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"499.9"	""	"566.0"	""	"504.2"	""	"559.5"	""	"893.8"	"982.2"	""	"372"	"16"	"32.000"	"25.000"	"0.446182922937626"	"18"	"0.007627"	"0.09363"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSMPGVR"	"[R].sSMPGVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"481.76736"	"962.52745"	"962.52907"	"-1.68"	"-0.00081"	"6/50"	"6"	"50"	"11198162.1726074"	"HCD"	"MS2"	"12.34193"	"599.4"	"100.000"	"28.7559"	"6712"	"6712"	"6696"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"650.2"	""	"826.5"	""	"672.3"	""	"760.0"	""	"1358.8"	"1443.3"	""	"372"	"19"	"32.000"	"25.000"	"0.23578324704956"	"16"	"0.006739"	"0.0762"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALSADR"	"[K].tALSADR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"481.77646"	"962.54564"	"962.54683"	"-1.23"	"-0.00059"	"5/58"	"5"	"58"	"31351028.5925293"	"HCD"	"MS2"	"31.51099"	"626.7"	"30.252"	"25.0089"	"5178"	"5178"	"5168"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"785.8"	""	"811.9"	""	"759.0"	""	"948.2"	""	"1276.5"	"1384.1"	""	"361"	"22"	"32.000"	"25.000"	"0.115472137804618"	"23"	"0.004942"	"0.05485"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALSADR"	"[K].tALSADR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"481.77658"	"962.54588"	"962.54683"	"-0.98"	"-0.00047"	"5/58"	"5"	"58"	"32448357.1461182"	"HCD"	"MS2"	"33.29222"	"709.5"	"33.708"	"24.9259"	"5159"	"5159"	"5153"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"878.5"	""	"928.9"	""	"849.0"	""	"1039.3"	""	"1490.5"	"1569.7"	""	"337"	"22"	"32.000"	"25.000"	"0.105341598732703"	"23"	"0.004676"	"0.05015"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGMNVAR"	"[K].sGMNVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.5517"	"0.0000"	"1"	"1"	"1"	"482.26572"	"963.52416"	"963.52432"	"-0.17"	"-0.00008"	"6/54"	"6"	"54"	"19783902.6407471"	"HCD"	"MS2"	"11.92139"	"1017.6"	"100.000"	"23.8174"	"4705"	"4705"	"4683"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1804.2"	""	"1527.8"	""	"1498.3"	""	"972.6"	""	"1742.7"	"2104.8"	""	"319"	"29"	"32.000"	"25.000"	"0.0203123741422158"	""	"0.00736"	"0.08615"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNLGLDLR"	"[K].YNLGLDLR.[T]"	""	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"482.26605"	"963.52483"	"963.52581"	"-1.02"	"-0.00049"	"7/68"	"7"	"68"	"775562.611633301"	"HCD"	"MS2"	"13.11848"	"19.7"	"100.000"	"67.7860"	"22540"	"22540"	"22521"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.1"	""	"25.1"	""	"30.2"	""	"35.5"	""	"36.9"	"34.7"	"NoQuanLabels"	"319"	"55"	"32.000"	"25.000"	"5.34269875456735E-05"	"24"	"0.002973"	"0.02849"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNLGLDLR"	"[K].YNLGLDLR.[T]"	""	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"482.26617"	"963.52507"	"963.52581"	"-0.76"	"-0.00037"	"7/68"	"7"	"68"	"774210.70703125"	"HCD"	"MS2"	"12.60243"	"17.9"	"100.000"	"67.8431"	"22549"	"22549"	"22526"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.3"	""	"29.9"	""	"29.6"	""	"28.5"	""	"32.4"	"36.7"	"NoQuanLabels"	"310"	"60"	"31.000"	"24.000"	"1.73113803405987E-05"	""	"0.001374"	"0.01618"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTVSSAR"	"[K].nTVSSAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"482.27390"	"963.54051"	"963.54207"	"-1.62"	"-0.00078"	"6/66"	"6"	"66"	"2380085.82128906"	"HCD"	"MS2"	"32.7252"	"154.2"	"100.000"	"19.2119"	"2874"	"2874"	"2862"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"214.9"	""	"215.2"	""	"217.5"	""	"251.4"	""	"284.3"	"287.5"	""	"285"	"17"	"31.000"	"24.000"	"0.264128256336611"	"21"	"0.003111"	"0.03116"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTVSSAR"	"[K].nTVSSAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"482.27402"	"963.54076"	"963.54207"	"-1.37"	"-0.00066"	"6/66"	"6"	"66"	"2714722.06524658"	"HCD"	"MS2"	"36.3683"	"177.1"	"100.000"	"19.2354"	"2880"	"2880"	"2864"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"259.2"	""	"234.0"	""	"228.4"	""	"306.7"	""	"331.1"	"322.5"	""	"285"	"23"	"31.000"	"24.000"	"0.0677352696968497"	"22"	"0.0023"	"0.02431"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLAAIA"	"[R].dYLAAIA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"483.27829"	"965.54930"	"965.55051"	"-1.25"	"-0.00061"	"5/50"	"5"	"50"	"237444.698974609"	"HCD"	"MS2"	"42.4758"	"7.6"	"100.000"	"97.1081"	"34069"	"34069"	"34062"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.5"	""	"14.0"	""	"12.9"	""	"9.1"	""	"9.3"	"13.1"	""	"209"	"27"	"30.000"	"23.000"	"0.0204228473128529"	"15"	"0.004942"	"0.05412"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLAAIA"	"[R].dYLAAIA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"483.27838"	"965.54949"	"965.55051"	"-1.06"	"-0.00051"	"5/50"	"5"	"50"	"266313.145874023"	"HCD"	"MS2"	"34.57949"	"8.7"	"100.000"	"97.1479"	"34064"	"34064"	"34058"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.6"	""	"12.6"	""	"12.6"	""	"15.9"	""	"11.2"	"17.3"	""	"207"	"28"	"30.000"	"23.000"	"0.0183628611272132"	"19"	"0.006308"	"0.07175"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLAAIA"	"[R].dYLAAIA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"483.27859"	"965.54991"	"965.55051"	"-0.62"	"-0.00030"	"5/50"	"5"	"50"	"764615.480163574"	"HCD"	"MS2"	"3.044911"	"10.3"	"100.000"	"97.6449"	"34246"	"34246"	"34238"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.1"	""	"12.2"	""	"12.4"	""	"21.1"	""	"19.5"	"20.1"	""	"176"	"29"	"29.000"	"22.000"	"0.0118435711156923"	"21"	"0.005309"	"0.05957"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLAAIA"	"[R].dYLAAIA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"483.27866"	"965.55004"	"965.55051"	"-0.50"	"-0.00024"	"5/50"	"5"	"50"	"1999500.89929199"	"HCD"	"MS2"	"1.352094"	"22.5"	"100.000"	"97.4067"	"34142"	"34142"	"34137"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.5"	""	"34.1"	""	"33.3"	""	"31.8"	"0.9"	"37.0"	"41.3"	""	"176"	"28"	"29.000"	"22.000"	"0.0128671591352191"	"21"	"0.008522"	"0.1053"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLAAIA"	"[R].dYLAAIA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"483.27884"	"965.55040"	"965.55051"	"-0.12"	"-0.00006"	"5/50"	"5"	"50"	"820336.047302246"	"HCD"	"MS2"	"3.114887"	"11.2"	"100.000"	"97.6601"	"34227"	"34227"	"34221"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.6"	""	"10.5"	""	"13.9"	""	"20.1"	""	"20.5"	"25.9"	""	"175"	"29"	"29.000"	"22.000"	"0.00984029352221061"	"16"	"0.006308"	"0.07155"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LECGGGR"	"[K].lEcGGGR.[W]"	"N-Term(TMT6plex); C3(Methylthio)"	"1"	"2"	"P13601"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"483.73785"	"966.46843"	"966.46984"	"-1.46"	"-0.00070"	"6/48"	"6"	"48"	"2042830.39831543"	"HCD"	"MS2"	"55.26435"	"100.6"	"100.000"	"40.5975"	"11514"	"11514"	"11491"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"144.8"	""	"124.5"	""	"117.3"	""	"161.5"	""	"193.1"	"213.9"	""	"219"	"17"	"30.000"	"23.000"	"0.244576158399943"	"14"	"0.003449"	"0.03487"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LECGGGR"	"[K].lEcGGGR.[W]"	"N-Term(TMT6plex); C3(Methylthio)"	"1"	"2"	"P13601"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"483.73807"	"966.46886"	"966.46984"	"-1.01"	"-0.00049"	"6/48"	"6"	"48"	"2426487.50006104"	"HCD"	"MS2"	"48.32784"	"116.3"	"100.000"	"40.7866"	"11581"	"11581"	"11557"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"147.3"	""	"144.6"	""	"147.7"	""	"196.2"	""	"222.0"	"246.2"	""	"207"	"18"	"30.000"	"23.000"	"0.175768218029791"	"14"	"0.002937"	"0.02807"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEALAALLR"	"[R].NEALAALLR.[D]"	""	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"485.78662"	"970.56597"	"970.56801"	"-2.10"	"-0.00102"	"5/80"	"5"	"80"	"738848.3515625"	"HCD"	"MS2"	"28.335"	"19.7"	"100.000"	"68.5564"	"22854"	"22854"	"22831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.5"	""	"23.4"	""	"29.6"	""	"30.7"	""	"36.6"	"38.8"	"NoQuanLabels"	"139"	"40"	"28.000"	"21.000"	"0.000650106943532549"	"18"	"0.0004639"	"0.007974"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEALAALLR"	"[R].NEALAALLR.[D]"	""	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"485.78680"	"970.56633"	"970.56801"	"-1.72"	"-0.00084"	"5/80"	"5"	"80"	"482522.469665527"	"HCD"	"MS2"	"29.45252"	"15.8"	"100.000"	"68.8045"	"22941"	"22941"	"22917"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.2"	""	"19.2"	""	"23.6"	""	"26.4"	""	"31.8"	"33.2"	"NoQuanLabels"	"131"	"18"	"28.000"	"21.000"	"0.0942413068757579"	"20"	"0.003449"	"0.03409"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGELPLR"	"[R].gGELPLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q642A2"	"Type-1 angiotensin II receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Agtrap PE=1 SV=1"	"Q642A2"	"Type-1 angiotensin II receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Agtrap PE=1 SV=1"	"0"	"2"	"2"	"0.2632"	"0.0000"	"1"	"1"	"1"	"485.79697"	"970.58666"	"970.58830"	"-1.69"	"-0.00082"	"6/48"	"6"	"48"	"3301299.80371094"	"HCD"	"MS2"	"25.28238"	"161.4"	"100.000"	"41.8839"	"12036"	"12036"	"12015"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"217.0"	""	"195.5"	""	"214.7"	""	"274.3"	""	"314.2"	"315.9"	""	"164"	"19"	"29.000"	"22.000"	"0.112671441951026"	""	"0.002147"	"0.02283"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGELPLR"	"[R].gGELPLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q642A2"	"Type-1 angiotensin II receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Agtrap PE=1 SV=1"	"Q642A2"	"Type-1 angiotensin II receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Agtrap PE=1 SV=1"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"485.79776"	"970.58824"	"970.58830"	"-0.05"	"-0.00003"	"6/48"	"6"	"48"	"3716926.42877197"	"HCD"	"MS2"	"32.90321"	"174.9"	"100.000"	"42.0499"	"12094"	"12094"	"12065"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"225.3"	""	"206.0"	""	"230.6"	""	"302.1"	""	"356.1"	"340.5"	""	"134"	"25"	"28.000"	"21.000"	"0.0221347592494666"	""	"0.000936"	"0.01128"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLALDPR"	"[R].gLALDPR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"485.79865"	"970.59001"	"970.58830"	"1.77"	"0.00086"	"4/48"	"4"	"48"	"621772.876953125"	"HCD"	"MS2"	"11.6117"	"37.0"	"100.000"	"48.8015"	"14837"	"14837"	"14808"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.4"	""	"46.0"	""	"62.1"	""	"59.0"	""	"69.0"	"68.7"	""	"134"	"17"	"28.000"	"21.000"	"0.147256611476583"	"19"	"0.004942"	"0.05516"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNPTVL"	"[R].vVNPTVL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62975"	"Protein Z-dependent protease inhibitor OS=Rattus norvegicus OX=10116 GN=Serpina10 PE=2 SV=2"	"Q62975"	"Protein Z-dependent protease inhibitor OS=Rattus norvegicus OX=10116 GN=Serpina10 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"485.80994"	"970.61260"	"970.61345"	"-0.88"	"-0.00043"	"5/48"	"5"	"48"	"269364.227172852"	"HCD"	"MS2"	"26.68642"	"7.3"	"100.000"	"85.6698"	"29732"	"29732"	"29714"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.1"	""	"10.3"	""	"10.5"	""	"12.1"	""	"15.0"	"14.4"	""	"127"	"27"	"28.000"	"21.000"	"0.0124960779396385"	"14"	"0.005067"	"0.05729"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVPGSR"	"[R].dLVPGSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7W6"	"Protein FAM234A OS=Rattus norvegicus OX=10116 GN=Fam234a PE=1 SV=1"	"Q5M7W6"	"Protein FAM234A OS=Rattus norvegicus OX=10116 GN=Fam234a PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"486.78723"	"972.56719"	"972.56756"	"-0.39"	"-0.00019"	"5/58"	"5"	"58"	"1665596.36608887"	"HCD"	"MS2"	"17.15292"	"95.8"	"100.000"	"36.9471"	"10025"	"10025"	"10004"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"111.0"	""	"122.1"	""	"125.1"	""	"168.4"	"2.7"	"192.6"	"187.7"	""	"300"	"23"	"31.000"	"24.000"	"0.067622505681219"	"24"	"0.00447"	"0.04759"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVPGSR"	"[R].dLVPGSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7W6"	"Protein FAM234A OS=Rattus norvegicus OX=10116 GN=Fam234a PE=1 SV=1"	"Q5M7W6"	"Protein FAM234A OS=Rattus norvegicus OX=10116 GN=Fam234a PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"486.78732"	"972.56737"	"972.56756"	"-0.20"	"-0.00010"	"6/58"	"6"	"58"	"2721089.4864502"	"HCD"	"MS2"	"24.29313"	"137.2"	"100.000"	"36.6680"	"9917"	"9917"	"9891"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"169.5"	""	"174.9"	""	"168.9"	""	"244.1"	"0.7"	"276.0"	"268.1"	""	"300"	"25"	"31.000"	"24.000"	"0.0442681383999958"	"24"	"0.002795"	"0.02638"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVVTPAR"	"[R].tVVTPAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"486.80518"	"972.60307"	"972.60395"	"-0.90"	"-0.00044"	"8/54"	"8"	"54"	"7507559.14758301"	"HCD"	"MS2"	"8.765609"	"348.1"	"100.000"	"27.3146"	"6127"	"6127"	"6107"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"519.9"	""	"488.1"	""	"537.6"	""	"530.1"	""	"607.0"	"614.6"	""	"221"	"22"	"30.000"	"23.000"	"0.0760960787460425"	""	"0.003449"	"0.03411"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEILAR"	"[R].aAEILAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"486.80524"	"972.60320"	"972.60395"	"-0.77"	"-0.00037"	"5/48"	"5"	"48"	"3265823.64025879"	"HCD"	"MS2"	"2.860761"	"167.5"	"100.000"	"44.2766"	"13007"	"13007"	"12989"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"202.0"	""	"206.6"	""	"236.1"	""	"264.8"	""	"335.0"	"348.7"	""	"198"	"30"	"29.000"	"22.000"	"0.010107300888706"	""	"0.0023"	"0.02328"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEILAR"	"[R].aAEILAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"486.80527"	"972.60326"	"972.60395"	"-0.71"	"-0.00034"	"8/48"	"8"	"48"	"4616794.14208984"	"HCD"	"MS2"	"6.036379"	"220.1"	"100.000"	"44.0899"	"12924"	"12924"	"12907"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"272.3"	""	"281.3"	""	"294.6"	""	"371.9"	""	"423.3"	"446.8"	""	"198"	"34"	"29.000"	"22.000"	"0.00435146199283447"	""	"0.001546"	"0.01857"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEILAR"	"[R].aAEILAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.0714"	"0.0000"	"1"	"1"	"1"	"486.80536"	"972.60344"	"972.60395"	"-0.52"	"-0.00025"	"6/48"	"6"	"48"	"3279486.40460205"	"HCD"	"MS2"	"4.377858"	"167.1"	"100.000"	"44.3770"	"13036"	"13036"	"13017"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"200.9"	""	"206.8"	""	"227.7"	""	"273.6"	""	"337.8"	"340.3"	""	"198"	"28"	"29.000"	"22.000"	"0.0160559199638534"	""	"0.001374"	"0.016"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVAEVLR"	"[K].gVAEVLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F795"	"Choline transporter-like protein 2 OS=Rattus norvegicus OX=10116 GN=Slc44a2 PE=2 SV=1"	"B4F795"	"Choline transporter-like protein 2 OS=Rattus norvegicus OX=10116 GN=Slc44a2 PE=2 SV=1"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"486.80542"	"972.60356"	"972.60395"	"-0.39"	"-0.00019"	"6/48"	"6"	"48"	"5058286.4831543"	"HCD"	"MS2"	"7.573446"	"241.1"	"100.000"	"45.6201"	"13553"	"13553"	"13534"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"227.5"	""	"276.6"	""	"287.3"	""	"433.2"	""	"520.4"	"551.6"	""	"198"	"35"	"29.000"	"22.000"	"0.00350457367672601"	""	"0.001374"	"0.01607"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVVTPAR"	"[R].tVVTPAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"0"	"2"	"2"	"0.1905"	"0.0000"	"1"	"1"	"1"	"486.80542"	"972.60356"	"972.60395"	"-0.39"	"-0.00019"	"5/54"	"5"	"54"	"5579649.69287109"	"HCD"	"MS2"	"23.36403"	"276.6"	"100.000"	"27.3385"	"6122"	"6122"	"6102"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"390.6"	""	"392.6"	""	"382.8"	""	"437.3"	""	"509.9"	"512.1"	""	"198"	"21"	"29.000"	"22.000"	"0.0856318239587937"	""	"0.002973"	"0.02861"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEILAR"	"[R].aAEILAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.3438"	"0.0000"	"1"	"1"	"1"	"486.80548"	"972.60369"	"972.60395"	"-0.27"	"-0.00013"	"8/48"	"8"	"48"	"4550760.23339844"	"HCD"	"MS2"	"3.805211"	"223.1"	"100.000"	"43.9702"	"12885"	"12885"	"12865"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"265.2"	""	"298.7"	""	"284.2"	""	"388.3"	""	"439.0"	"443.1"	""	"198"	"32"	"29.000"	"22.000"	"0.00661660478392929"	""	"0.001211"	"0.01414"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVAEVLR"	"[K].gVAEVLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F795"	"Choline transporter-like protein 2 OS=Rattus norvegicus OX=10116 GN=Slc44a2 PE=2 SV=1"	"B4F795"	"Choline transporter-like protein 2 OS=Rattus norvegicus OX=10116 GN=Slc44a2 PE=2 SV=1"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"486.80548"	"972.60369"	"972.60395"	"-0.27"	"-0.00013"	"6/48"	"6"	"48"	"4909565.36993408"	"HCD"	"MS2"	"1.188838"	"231.6"	"100.000"	"45.7678"	"13601"	"13601"	"13581"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"228.0"	""	"261.1"	""	"274.2"	""	"409.5"	""	"510.7"	"524.4"	""	"198"	"36"	"29.000"	"22.000"	"0.00262201513722063"	""	"0.000936"	"0.01255"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDTILGP"	"[K].eDTILGP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02589"	"[Protein ADP-ribosylarginine] hydrolase OS=Rattus norvegicus OX=10116 GN=Adprh PE=1 SV=2"	"Q02589"	"[Protein ADP-ribosylarginine] hydrolase OS=Rattus norvegicus OX=10116 GN=Adprh PE=1 SV=2"	"0"	"2"	"2"	"0.6136"	"0.0000"	"1"	"1"	"1"	"487.27328"	"973.53929"	"973.54034"	"-1.08"	"-0.00052"	"6/54"	"6"	"54"	"1115718.79394531"	"HCD"	"MS2"	"3.362011"	"27.6"	"100.000"	"71.7366"	"24150"	"24150"	"24136"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.5"	""	"38.5"	""	"39.9"	""	"41.7"	""	"53.3"	"55.4"	""	"407"	"44"	"33.000"	"26.000"	"0.00082520986963746"	""	"0.0006732"	"0.008923"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDTILGP"	"[K].eDTILGP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02589"	"[Protein ADP-ribosylarginine] hydrolase OS=Rattus norvegicus OX=10116 GN=Adprh PE=1 SV=2"	"Q02589"	"[Protein ADP-ribosylarginine] hydrolase OS=Rattus norvegicus OX=10116 GN=Adprh PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"487.27383"	"973.54039"	"973.54034"	"0.05"	"0.00002"	"6/54"	"6"	"54"	"1078538.54217529"	"HCD"	"MS2"	"9.354595"	"24.5"	"100.000"	"71.8834"	"24196"	"24196"	"24177"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.2"	""	"32.4"	""	"31.8"	""	"37.3"	""	"49.0"	"52.3"	""	"384"	"60"	"32.000"	"25.000"	"2.01976679774059E-05"	""	"0.0001301"	"0.005023"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQAALER"	"[R].gQAALER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"3"	"487.28470"	"973.56212"	"973.56281"	"-0.71"	"-0.00034"	"6/58"	"6"	"58"	"9361223.53033447"	"HCD"	"MS2"	"25.67962"	"482.9"	"100.000"	"23.1768"	"4461"	"4461"	"4435"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"724.5"	""	"619.2"	""	"653.6"	""	"784.0"	"1.5"	"920.7"	"871.9"	""	"325"	"32"	"32.000"	"25.000"	"0.0101123796339988"	""	"0.003449"	"0.03407"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQAALER"	"[R].gQAALER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"3"	"487.28482"	"973.56236"	"973.56281"	"-0.46"	"-0.00022"	"6/58"	"6"	"58"	"8002312.03314209"	"HCD"	"MS2"	"38.77556"	"408.4"	"100.000"	"23.2137"	"4459"	"4459"	"4431"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"588.3"	""	"524.9"	""	"552.4"	""	"657.5"	""	"787.7"	"762.5"	""	"325"	"33"	"32.000"	"25.000"	"0.00768870795812406"	""	"0.00413"	"0.04572"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANVTAIR"	"[R].aNVTAIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"487.30252"	"973.59776"	"973.59920"	"-1.47"	"-0.00072"	"6/58"	"6"	"58"	"9615233.19946289"	"HCD"	"MS2"	"45.35669"	"487.0"	"100.000"	"32.5152"	"8235"	"8235"	"8211"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"651.5"	"15.6"	"594.5"	""	"612.9"	""	"838.0"	""	"975.0"	"941.4"	""	"241"	"23"	"30.000"	"23.000"	"0.0554609171165534"	"22"	"0.003922"	"0.03989"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANVTAIR"	"[R].aNVTAIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"487.30353"	"973.59978"	"973.59920"	"0.60"	"0.00029"	"6/58"	"6"	"58"	"8679980.68151855"	"HCD"	"MS2"	"47.11695"	"447.6"	"100.000"	"32.5707"	"8251"	"8251"	"8227"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"572.6"	"16.0"	"525.6"	""	"585.7"	""	"793.3"	""	"910.1"	"850.8"	""	"214"	"23"	"30.000"	"23.000"	"0.0487959500067887"	"20"	"0.003059"	"0.03043"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVISNGR"	"[R].vVISnGR.[I]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"487.79474"	"974.58220"	"974.58321"	"-1.04"	"-0.00051"	"6/52"	"6"	"52"	"2865592.98791504"	"HCD"	"MS2"	"16.9944"	"162.0"	"100.000"	"37.0014"	"10053"	"10053"	"10029"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"240.2"	""	"195.5"	""	"200.7"	""	"273.8"	"6.4"	"303.0"	"315.8"	""	"339"	"27"	"32.000"	"25.000"	"0.0326715472785864"	"23"	"0.005369"	"0.06071"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLVAER"	"[R].gTLVAER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"487.79483"	"974.58238"	"974.58321"	"-0.85"	"-0.00041"	"5/56"	"5"	"56"	"6473696.1572876"	"HCD"	"MS2"	"7.08892"	"342.3"	"100.000"	"29.7023"	"7096"	"7096"	"7073"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"483.7"	""	"447.7"	""	"455.9"	""	"594.5"	"0.1"	"625.7"	"636.0"	""	"311"	"40"	"31.000"	"24.000"	"0.00174473869643955"	""	"0.005001"	"0.05691"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLADIAR"	"[R].sLADIAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"487.79486"	"974.58245"	"974.58321"	"-0.79"	"-0.00038"	"5/54"	"5"	"54"	"2739297.70123291"	"HCD"	"MS2"	"18.66333"	"137.0"	"100.000"	"49.2354"	"15026"	"15026"	"15004"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"202.7"	""	"165.5"	""	"179.3"	""	"213.4"	""	"266.0"	"277.3"	""	"300"	"33"	"31.000"	"24.000"	"0.00688797019255303"	""	"0.002973"	"0.02828"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLADIAR"	"[R].sLADIAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.1034"	"0.0000"	"1"	"1"	"1"	"487.79498"	"974.58269"	"974.58321"	"-0.54"	"-0.00026"	"6/54"	"6"	"54"	"1449689.5692749"	"HCD"	"MS2"	"20.57137"	"76.4"	"100.000"	"49.8995"	"15285"	"15285"	"15262"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"109.0"	"2.1"	"96.5"	""	"99.4"	""	"112.0"	""	"158.1"	"148.4"	""	"300"	"29"	"31.000"	"24.000"	"0.0179098215669641"	""	"0.0008629"	"0.01121"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLVAER"	"[R].gTLVAER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"487.79498"	"974.58269"	"974.58321"	"-0.54"	"-0.00026"	"5/56"	"5"	"56"	"6165185.84216309"	"HCD"	"MS2"	"10.98638"	"329.9"	"100.000"	"29.7306"	"7095"	"7095"	"7079"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"472.6"	""	"437.6"	""	"434.1"	""	"577.2"	"2.2"	"614.8"	"586.7"	""	"300"	"40"	"31.000"	"24.000"	"0.00166759759092239"	""	"0.004817"	"0.05069"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLADIAR"	"[R].sLADIAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.5588"	"0.0000"	"1"	"1"	"1"	"487.79517"	"974.58306"	"974.58321"	"-0.16"	"-0.00008"	"6/54"	"6"	"54"	"1758713.74365234"	"HCD"	"MS2"	"17.02702"	"93.9"	"100.000"	"49.5327"	"15147"	"15147"	"15126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"139.5"	""	"109.8"	""	"131.9"	""	"146.3"	""	"182.6"	"186.9"	""	"300"	"34"	"31.000"	"24.000"	"0.0064282278059616"	""	"0.0008629"	"0.009769"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLADIAR"	"[R].sLADIAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"487.79517"	"974.58306"	"974.58321"	"-0.16"	"-0.00008"	"5/54"	"5"	"54"	"2880050.85931396"	"HCD"	"MS2"	"13.32069"	"140.7"	"100.000"	"49.5839"	"15156"	"15156"	"15137"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"211.6"	""	"171.2"	""	"195.5"	""	"227.9"	""	"262.5"	"266.6"	""	"300"	"33"	"31.000"	"24.000"	"0.00684055373926945"	""	"0.001374"	"0.01627"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVISNGR"	"[R].vVISnGR.[I]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"487.79526"	"974.58324"	"974.58321"	"0.03"	"0.00001"	"5/52"	"5"	"52"	"3354093.94335938"	"HCD"	"MS2"	"17.70267"	"190.7"	"100.000"	"37.2116"	"10133"	"10133"	"10109"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"284.1"	""	"235.3"	""	"239.7"	""	"319.4"	"3.2"	"375.9"	"350.6"	""	"297"	"23"	"31.000"	"24.000"	"0.0799330627036688"	"19"	"0.008522"	"0.106"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIVSGSR"	"[R].qIVSGSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"488.29218"	"975.57707"	"975.57846"	"-1.42"	"-0.00069"	"5/64"	"5"	"64"	"8278096.73535156"	"HCD"	"MS2"	"4.439107"	"442.1"	"100.000"	"23.7209"	"4683"	"4683"	"4664"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"617.5"	""	"555.5"	""	"569.6"	""	"753.7"	""	"839.6"	"859.6"	""	"308"	"27"	"31.000"	"24.000"	"0.0294117401819201"	""	"0.003449"	"0.03507"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIVSGSR"	"[R].qIVSGSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"488.29266"	"975.57805"	"975.57846"	"-0.42"	"-0.00020"	"5/64"	"5"	"64"	"7223979.46118164"	"HCD"	"MS2"	"7.092764"	"399.4"	"100.000"	"23.7784"	"4689"	"4689"	"4669"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"576.6"	""	"485.3"	""	"515.4"	""	"653.9"	"0.5"	"792.6"	"763.5"	""	"307"	"28"	"31.000"	"24.000"	"0.0219335222631454"	""	"0.002973"	"0.03014"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSTAVGVR"	"[K].gSTAVGVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"488.29279"	"975.57829"	"975.57846"	"-0.17"	"-0.00008"	"7/58"	"7"	"58"	"17073829.4900513"	"HCD"	"MS2"	"1.303703"	"668.7"	"76.682"	"23.3468"	"4513"	"4513"	"4495"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"927.2"	""	"796.9"	""	"877.7"	""	"1149.3"	""	"1249.3"	"1350.3"	""	"307"	"45"	"31.000"	"24.000"	"0.000459312621719357"	""	"0"	"0.002519"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSTAVGVR"	"[K].gSTAVGVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"488.29294"	"975.57860"	"975.57846"	"0.14"	"0.00007"	"7/58"	"7"	"58"	"17590827.4649048"	"HCD"	"MS2"	"1.897719"	"836.8"	"93.053"	"23.2777"	"4502"	"4502"	"4483"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1168.0"	""	"1018.8"	""	"1144.1"	""	"1377.1"	""	"1586.8"	"1647.7"	""	"306"	"44"	"31.000"	"24.000"	"0.000664800642982505"	"24"	"0"	"0.002641"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDDASR"	"[K].sPDDASR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.5517"	"0.0000"	"1"	"1"	"1"	"488.74777"	"976.48827"	"976.48970"	"-1.47"	"-0.00072"	"6/58"	"6"	"58"	"2173508.55334473"	"HCD"	"MS2"	"10.76348"	"116.0"	"100.000"	"19.3541"	"2930"	"2930"	"2914"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"176.8"	""	"134.0"	""	"141.7"	""	"186.7"	"0.4"	"235.5"	"225.6"	""	"288"	"29"	"31.000"	"24.000"	"0.0175130784093077"	""	"0.009417"	"0.1226"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDDASR"	"[K].sPDDASR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"488.74796"	"976.48863"	"976.48970"	"-1.10"	"-0.00054"	"6/58"	"6"	"58"	"1646156.8192749"	"HCD"	"MS2"	"19.47003"	"101.1"	"100.000"	"19.3938"	"2940"	"2940"	"2930"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"173.5"	""	"111.9"	""	"122.8"	""	"175.5"	""	"184.9"	"196.0"	""	"288"	"28"	"31.000"	"24.000"	"0.0249667775676596"	""	"0.008668"	"0.1093"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].VLSADDk.[T]"	"K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"488.77844"	"976.54961"	"976.55124"	"-1.67"	"-0.00082"	"6/54"	"6"	"54"	"678780.397583008"	"HCD"	"MS2"	"0"	"29.3"	"100.000"	"94.5390"	"33126"	"33126"	"33119"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.7"	""	"22.3"	""	"29.5"	""	"47.9"	"0.4"	"81.8"	"75.8"	""	"422"	"51"	"33.000"	"26.000"	"0.000180419076418668"	""	"0.004817"	"0.05057"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].VLSADDk.[T]"	"K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"488.77859"	"976.54991"	"976.55124"	"-1.36"	"-0.00066"	"5/54"	"5"	"54"	"114705.894958496"	"HCD"	"MS2"	"0"	"6.9"	"100.000"	"94.8248"	"33252"	"33252"	"33242"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.5"	""	"5.2"	""	"8.4"	""	"14.4"	""	"16.7"	"15.6"	""	"422"	"37"	"33.000"	"26.000"	"0.00429815878395907"	"25"	"0.009302"	"0.1208"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].VLSADDk.[T]"	"K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"488.77869"	"976.55010"	"976.55124"	"-1.17"	"-0.00057"	"6/54"	"6"	"54"	"944368.515991211"	"HCD"	"MS2"	"1.304805"	"44.1"	"100.000"	"94.2774"	"33033"	"33033"	"33027"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.8"	""	"30.0"	""	"38.0"	""	"78.5"	""	"133.6"	"118.2"	""	"422"	"51"	"33.000"	"26.000"	"0.00018335065057941"	""	"0.004752"	"0.05052"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].VLSADDk.[T]"	"K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"488.77881"	"976.55034"	"976.55124"	"-0.92"	"-0.00045"	"5/54"	"5"	"54"	"179041.94354248"	"HCD"	"MS2"	"27.84125"	"11.8"	"100.000"	"94.0129"	"32941"	"32941"	"32930"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.8"	""	"15.0"	""	"11.9"	""	"21.7"	""	"29.4"	"25.9"	""	"442"	"40"	"33.000"	"26.000"	"0.00225627625899397"	""	"0.005874"	"0.06548"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].VLSADDk.[T]"	"K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"488.77887"	"976.55046"	"976.55124"	"-0.80"	"-0.00039"	"6/54"	"6"	"54"	"13631890.1017456"	"HCD"	"MS2"	"4.801193"	"541.1"	"86.921"	"26.0098"	"5599"	"5599"	"5587"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"465.1"	""	"459.3"	""	"542.3"	""	"1157.0"	"2.0"	"1319.7"	"1209.6"	""	"417"	"54"	"33.000"	"26.000"	"8.00029606851401E-05"	""	"0.005369"	"0.06145"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].VLSADDk.[T]"	"K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"488.77896"	"976.55065"	"976.55124"	"-0.61"	"-0.00030"	"6/54"	"6"	"54"	"744677.990844727"	"HCD"	"MS2"	"0"	"34.3"	"100.000"	"94.5398"	"33149"	"33149"	"33144"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.7"	""	"25.1"	""	"31.9"	""	"58.6"	""	"102.7"	"93.9"	""	"416"	"54"	"33.000"	"26.000"	"7.65708265176464E-05"	""	"0.003507"	"0.0362"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].VLSADDk.[T]"	"K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5741"	"0.0000"	"1"	"1"	"1"	"488.77917"	"976.55107"	"976.55124"	"-0.17"	"-0.00008"	"6/54"	"6"	"54"	"802509.702087402"	"HCD"	"MS2"	"0"	"37.4"	"100.000"	"94.2880"	"33059"	"33059"	"33051"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.2"	""	"23.9"	""	"34.2"	""	"70.1"	"0.2"	"109.9"	"94.2"	""	"416"	"54"	"33.000"	"26.000"	"7.50003577485016E-05"	""	"0.002973"	"0.02904"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTK.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"488.79688"	"976.58647"	"976.58763"	"-1.18"	"-0.00058"	"5/54"	"5"	"54"	"3905064.18475342"	"HCD"	"MS2"	"54.38025"	"237.2"	"100.000"	"33.6040"	"8670"	"8670"	"8653"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"347.3"	""	"313.4"	""	"312.8"	""	"396.9"	""	"438.9"	"440.9"	""	"259"	"29"	"31.000"	"24.000"	"0.0157133856135215"	"22"	"0.003581"	"0.03721"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTK.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"488.79700"	"976.58672"	"976.58763"	"-0.93"	"-0.00046"	"5/54"	"5"	"54"	"4476573.68255615"	"HCD"	"MS2"	"40.33612"	"260.6"	"100.000"	"33.6227"	"8684"	"8684"	"8669"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"371.5"	""	"366.5"	""	"337.3"	""	"430.8"	""	"502.5"	"462.5"	""	"259"	"38"	"31.000"	"24.000"	"0.00226605146176893"	"24"	"0.002871"	"0.02695"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].LATDVTk.[I]"	"K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5593"	"0.0000"	"1"	"1"	"1"	"488.79773"	"976.58818"	"976.58763"	"0.57"	"0.00028"	"6/54"	"6"	"54"	"2136763.48223877"	"HCD"	"MS2"	"0"	"122.5"	"100.000"	"37.6176"	"10295"	"10295"	"10284"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"169.9"	""	"188.5"	""	"180.1"	""	"186.0"	"0.8"	"232.1"	"202.9"	""	"238"	"59"	"30.000"	"23.000"	"1.5294911253329E-05"	""	"0.003922"	"0.04032"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMLTPAL"	"[K].smLTPAL.[-]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"O88350"	"Putative hydrolase RBBP9 OS=Rattus norvegicus OX=10116 GN=Rbbp9 PE=1 SV=2"	"O88350"	"Putative hydrolase RBBP9 OS=Rattus norvegicus OX=10116 GN=Rbbp9 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"489.27972"	"977.55217"	"977.55389"	"-1.75"	"-0.00086"	"4/56"	"4"	"56"	"684937.010559082"	"HCD"	"MS2"	"27.88731"	"23.7"	"100.000"	"73.8049"	"24991"	"24991"	"24968"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.5"	""	"28.2"	""	"34.4"	""	"43.8"	""	"43.1"	"46.1"	""	"334"	"15"	"32.000"	"25.000"	"0.541647160973414"	"13"	"0.009239"	"0.1204"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMLTPAL"	"[K].smLTPAL.[-]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"O88350"	"Putative hydrolase RBBP9 OS=Rattus norvegicus OX=10116 GN=Rbbp9 PE=1 SV=2"	"O88350"	"Putative hydrolase RBBP9 OS=Rattus norvegicus OX=10116 GN=Rbbp9 PE=1 SV=2"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"489.28021"	"977.55315"	"977.55389"	"-0.75"	"-0.00037"	"5/56"	"5"	"56"	"869279.42980957"	"HCD"	"MS2"	"10.9724"	"23.9"	"100.000"	"74.2954"	"25177"	"25177"	"25157"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.9"	""	"22.3"	""	"24.6"	""	"58.2"	""	"50.9"	"53.6"	""	"317"	"23"	"32.000"	"25.000"	"0.0803580272615407"	"15"	"0.006769"	"0.07844"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMLTPAL"	"[K].smLTPAL.[-]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"O88350"	"Putative hydrolase RBBP9 OS=Rattus norvegicus OX=10116 GN=Rbbp9 PE=1 SV=2"	"O88350"	"Putative hydrolase RBBP9 OS=Rattus norvegicus OX=10116 GN=Rbbp9 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"489.28049"	"977.55370"	"977.55389"	"-0.19"	"-0.00009"	"5/56"	"5"	"56"	"774338.453186035"	"HCD"	"MS2"	"30.61654"	"22.5"	"100.000"	"73.9999"	"25057"	"25057"	"25040"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.5"	""	"19.5"	""	"29.2"	""	"52.3"	""	"40.4"	"47.5"	""	"319"	"21"	"32.000"	"25.000"	"0.141175939768018"	"14"	"0.009417"	"0.1231"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIGEGAR"	"[K].fIGEGAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"489.78186"	"978.55644"	"978.55700"	"-0.56"	"-0.00028"	"4/48"	"4"	"48"	"7386882.80554199"	"HCD"	"MS2"	"6.114451"	"387.0"	"100.000"	"40.3606"	"11417"	"11417"	"11398"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"524.4"	""	"506.3"	""	"564.8"	""	"663.8"	""	"728.6"	"683.4"	""	"247"	"23"	"30.000"	"23.000"	"0.0591108164018458"	"17"	"0.009542"	"0.1252"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIGEGAR"	"[K].fIGEGAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"489.78207"	"978.55687"	"978.55700"	"-0.13"	"-0.00006"	"4/48"	"4"	"48"	"7054792.32250977"	"HCD"	"MS2"	"0"	"382.0"	"100.000"	"40.5151"	"11471"	"11471"	"11457"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"513.6"	""	"511.1"	""	"523.4"	""	"627.1"	""	"754.3"	"698.7"	""	"247"	"23"	"30.000"	"23.000"	"0.0634843909704296"	"17"	"0.009478"	"0.1243"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVGEGAR"	"[K].yVGEGAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"490.77136"	"980.53545"	"980.53626"	"-0.83"	"-0.00041"	"5/48"	"5"	"48"	"7573877.56994629"	"HCD"	"MS2"	"8.589396"	"416.8"	"100.000"	"25.2089"	"5258"	"5258"	"5243"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"586.5"	""	"554.0"	""	"600.4"	""	"674.6"	""	"773.2"	"766.0"	""	"246"	"33"	"30.000"	"23.000"	"0.00613627919575815"	""	"0.001886"	"0.02095"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADGSVR"	"[R].fADGSVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"490.77151"	"980.53575"	"980.53626"	"-0.52"	"-0.00025"	"6/52"	"6"	"52"	"8215594.96051025"	"HCD"	"MS2"	"12.75769"	"421.8"	"100.000"	"34.2305"	"8921"	"8921"	"8905"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"500.1"	""	"539.5"	""	"563.2"	""	"704.0"	""	"809.0"	"893.3"	""	"210"	"29"	"30.000"	"23.000"	"0.0134026074925191"	""	"0.002056"	"0.02218"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADGSVR"	"[R].fADGSVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"490.77158"	"980.53588"	"980.53626"	"-0.39"	"-0.00019"	"5/52"	"5"	"52"	"9287328.96582031"	"HCD"	"MS2"	"10.31846"	"489.1"	"100.000"	"34.2200"	"8923"	"8923"	"8903"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"558.0"	""	"628.1"	""	"642.8"	""	"852.8"	""	"960.1"	"1014.2"	""	"210"	"30"	"30.000"	"23.000"	"0.010819054264637"	""	"0.001465"	"0.01827"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATHAVVR"	"[R].aTHAVVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"491.80270"	"982.59813"	"982.59953"	"-1.42"	"-0.00070"	"6/48"	"6"	"48"	"6598771.40374756"	"HCD"	"MS2"	"1.832729"	"301.7"	"100.000"	"19.1525"	"2850"	"2850"	"2837"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"343.6"	""	"412.3"	""	"412.0"	""	"447.3"	""	"647.9"	"608.3"	""	"108"	"28"	"27.000"	"20.000"	"0.00785947903514262"	""	"0.002056"	"0.02217"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATHAVVR"	"[R].aTHAVVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"491.80298"	"982.59868"	"982.59953"	"-0.86"	"-0.00042"	"9/48"	"9"	"48"	"7655173.98370361"	"HCD"	"MS2"	"0"	"328.6"	"100.000"	"19.2033"	"2867"	"2867"	"2856"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"358.0"	""	"435.7"	""	"465.8"	""	"479.3"	""	"697.4"	"690.9"	""	"108"	"28"	"27.000"	"20.000"	"0.00819207198428042"	"19"	"0.001635"	"0.01974"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGHASDR"	"[K].lGHASDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"492.77414"	"984.54100"	"984.54241"	"-1.43"	"-0.00070"	"6/50"	"6"	"50"	"9258636.94207764"	"HCD"	"MS2"	"0"	"425.8"	"100.000"	"19.3725"	"2937"	"2937"	"2928"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"656.4"	""	"403.0"	""	"658.2"	""	"779.4"	""	"816.4"	"725.9"	""	"170"	"40"	"29.000"	"22.000"	"0.000859842536120913"	""	"0.001134"	"0.01379"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGHASDR"	"[K].lGHASDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"492.77444"	"984.54161"	"984.54241"	"-0.81"	"-0.00040"	"6/50"	"6"	"50"	"9987801.534729"	"HCD"	"MS2"	"0"	"471.2"	"100.000"	"19.4328"	"2955"	"2955"	"2943"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"756.6"	""	"470.1"	""	"697.7"	""	"859.7"	""	"911.7"	"774.3"	""	"170"	"40"	"29.000"	"22.000"	"0.000853923421736637"	""	"0.000936"	"0.01166"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIPDAR"	"[K].eGIPDAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"493.77661"	"986.54595"	"986.54683"	"-0.89"	"-0.00044"	"9/56"	"9"	"56"	"7591322.85083008"	"HCD"	"MS2"	"6.275094"	"311.7"	"100.000"	"31.4289"	"7794"	"7794"	"7772"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"644.7"	""	"441.0"	""	"292.1"	""	"572.7"	""	"487.1"	"511.6"	""	"336"	"29"	"32.000"	"25.000"	"0.0231904556453284"	""	"0.001812"	"0.02052"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIPDAR"	"[K].eGIPDAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"493.77695"	"986.54662"	"986.54683"	"-0.21"	"-0.00010"	"4/56"	"4"	"56"	"7178734.12963867"	"HCD"	"MS2"	"6.855512"	"310.3"	"100.000"	"31.4571"	"7796"	"7796"	"7773"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"624.4"	""	"435.6"	""	"301.6"	""	"550.3"	""	"521.1"	"501.4"	""	"302"	"31"	"31.000"	"24.000"	"0.0130309760712812"	""	"0.001635"	"0.01965"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLNSVP"	"[K].dLLNSVP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"493.78912"	"986.57097"	"986.57198"	"-1.02"	"-0.00050"	"5/56"	"5"	"56"	"425530.335388184"	"HCD"	"MS2"	"46.62795"	"14.5"	"100.000"	"93.0303"	"32579"	"32579"	"32568"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.7"	""	"21.2"	""	"23.1"	""	"21.5"	""	"23.0"	"26.2"	""	"382"	"28"	"32.000"	"25.000"	"0.0281211687964649"	"19"	"0.002973"	"0.02971"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLNSVP"	"[K].dLLNSVP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"493.78946"	"986.57164"	"986.57198"	"-0.34"	"-0.00017"	"5/56"	"5"	"56"	"345737.269470215"	"HCD"	"MS2"	"51.03561"	"12.2"	"100.000"	"93.0767"	"32610"	"32610"	"32595"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.9"	""	"14.4"	""	"19.0"	""	"20.4"	""	"17.6"	"24.8"	""	"343"	"28"	"32.000"	"25.000"	"0.0248464372882927"	"19"	"0.001812"	"0.02072"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVAEVR"	"[K].lAVAEVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"493.81284"	"986.61839"	"986.61960"	"-1.22"	"-0.00060"	"5/48"	"5"	"48"	"2070151.50445557"	"HCD"	"MS2"	"26.8006"	"108.6"	"100.000"	"47.3284"	"14249"	"14249"	"14222"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"137.1"	"2.6"	"134.4"	""	"157.1"	""	"178.9"	""	"199.0"	"222.0"	""	"260"	"24"	"31.000"	"24.000"	"0.0490843848203041"	""	"0.006739"	"0.07596"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVAEVR"	"[K].lAVAEVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"493.81311"	"986.61894"	"986.61960"	"-0.66"	"-0.00033"	"5/48"	"5"	"48"	"2001303.14080811"	"HCD"	"MS2"	"25.45308"	"107.3"	"100.000"	"47.5924"	"14345"	"14345"	"14321"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.6"	""	"130.2"	""	"132.9"	""	"184.6"	"2.0"	"219.3"	"224.4"	""	"260"	"23"	"31.000"	"24.000"	"0.0722675534451525"	""	"0.004942"	"0.05497"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAQPIM"	"[K].aQAQPIM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P19511"	"ATP synthase F(0) complex subunit B1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pb PE=1 SV=1"	"P19511"	"ATP synthase F(0) complex subunit B1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pb PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"494.27814"	"987.54900"	"987.54947"	"-0.48"	"-0.00024"	"5/54"	"5"	"54"	"2589395.8102417"	"HCD"	"MS2"	"33.92089"	"70.1"	"100.000"	"50.8294"	"15664"	"15664"	"15649"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"95.2"	""	"88.8"	""	"89.7"	""	"116.5"	""	"134.1"	"141.5"	""	"417"	"16"	"33.000"	"26.000"	"0.480956788848134"	"20"	"0.004942"	"0.05588"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAQPIM"	"[K].aQAQPIM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P19511"	"ATP synthase F(0) complex subunit B1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pb PE=1 SV=1"	"P19511"	"ATP synthase F(0) complex subunit B1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pb PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"494.27820"	"987.54912"	"987.54947"	"-0.35"	"-0.00017"	"5/54"	"5"	"54"	"2507174.51293945"	"HCD"	"MS2"	"22.10387"	"58.2"	"100.000"	"50.5131"	"15546"	"15546"	"15529"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.4"	""	"69.7"	""	"79.5"	""	"90.8"	""	"115.5"	"121.5"	""	"417"	"25"	"33.000"	"26.000"	"0.0703244038553741"	"22"	"0.003967"	"0.04114"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGPGPFR"	"[K].qGPGPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"494.28180"	"987.55632"	"987.55733"	"-1.02"	"-0.00050"	"6/62"	"6"	"62"	"13479577.6849365"	"HCD"	"MS2"	"1.249115"	"328.7"	"55.686"	"32.3135"	"8146"	"8146"	"8129"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"430.5"	""	"367.6"	""	"466.5"	""	"550.4"	""	"590.5"	"717.7"	""	"391"	"24"	"32.000"	"25.000"	"0.0726351372884972"	"20"	"0.005369"	"0.06059"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGPGPFR"	"[K].qGPGPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"494.28189"	"987.55651"	"987.55733"	"-0.84"	"-0.00041"	"6/62"	"6"	"62"	"10063444.175293"	"HCD"	"MS2"	"24.75014"	"480.1"	"100.000"	"32.0312"	"8031"	"8031"	"8006"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"623.4"	""	"546.1"	""	"610.0"	""	"847.3"	""	"879.2"	"1055.6"	""	"391"	"20"	"32.000"	"25.000"	"0.210448949264633"	""	"0.004942"	"0.05428"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGPGPFR"	"[K].qGPGPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"494.28201"	"987.55675"	"987.55733"	"-0.59"	"-0.00029"	"6/62"	"6"	"62"	"8917193.9407959"	"HCD"	"MS2"	"40.06712"	"478.0"	"100.000"	"31.9848"	"8020"	"8020"	"7999"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"644.6"	""	"528.7"	""	"598.2"	""	"838.2"	""	"895.0"	"1032.3"	""	"390"	"20"	"32.000"	"25.000"	"0.195900079104287"	""	"0.003967"	"0.04162"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGPGPFR"	"[K].qGPGPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"494.28244"	"987.55760"	"987.55733"	"0.28"	"0.00014"	"6/62"	"6"	"62"	"15491994.1582031"	"HCD"	"MS2"	"0"	"543.6"	"80.362"	"32.2511"	"8128"	"8128"	"8119"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"701.0"	"4.9"	"625.0"	""	"738.7"	""	"906.1"	""	"970.7"	"1218.6"	""	"376"	"23"	"32.000"	"25.000"	"0.0940064925756719"	"20"	"0.004942"	"0.05373"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNGITPR"	"[K].tNGITPR.[R]"	"N-Term(TMT6plex)"	"3"	"3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5;Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5; Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"494.29214"	"987.57701"	"987.57846"	"-1.47"	"-0.00072"	"6/66"	"6"	"66"	"10045828.4436035"	"HCD"	"MS2"	"12.03489"	"453.5"	"100.000"	"25.1669"	"5256"	"5256"	"5238"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"756.0"	""	"647.2"	""	"669.4"	""	"672.5"	""	"674.9"	"874.1"	""	"378"	"15"	"32.000"	"25.000"	"0.582722522597128"	"25"	"0.008522"	"0.1055"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNGITPR"	"[K].tNGITPR.[R]"	"N-Term(TMT6plex)"	"3"	"3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5;Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5; Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"494.29239"	"987.57750"	"987.57846"	"-0.97"	"-0.00048"	"5/66"	"5"	"66"	"10405802.2007446"	"HCD"	"MS2"	"19.40268"	"448.3"	"100.000"	"25.2777"	"5287"	"5287"	"5270"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"768.4"	""	"649.7"	""	"671.7"	""	"636.1"	""	"654.0"	"864.7"	""	"378"	"14"	"32.000"	"25.000"	"0.838420337030407"	"20"	"0.009081"	"0.1169"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNADALR"	"[R].vNADALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.3793"	"0.0000"	"1"	"1"	"1"	"494.29260"	"987.57793"	"987.57846"	"-0.54"	"-0.00027"	"5/58"	"5"	"58"	"39019829.1010742"	"HCD"	"MS2"	"1.15037"	"845.7"	"51.297"	"37.0176"	"10060"	"10060"	"10043"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1136.6"	""	"1187.0"	""	"921.7"	""	"1212.0"	"8.1"	"1755.5"	"1810.4"	""	"301"	"29"	"31.000"	"24.000"	"0.0186438886272821"	""	"0.003449"	"0.03508"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNADALR"	"[R].vNADALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"494.29306"	"987.57884"	"987.57846"	"0.39"	"0.00019"	"5/58"	"5"	"58"	"35517696.2242432"	"HCD"	"MS2"	"1.159406"	"910.0"	"58.655"	"37.1933"	"10126"	"10126"	"10109"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1226.4"	""	"1246.9"	""	"982.4"	""	"1299.7"	""	"1933.4"	"1959.1"	""	"306"	"28"	"31.000"	"24.000"	"0.0232643772049072"	""	"0.002379"	"0.02468"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDGLNR"	"[K].aLDGLNR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"494.29364"	"987.58000"	"987.57846"	"1.56"	"0.00077"	"5/50"	"5"	"50"	"7707541.85760498"	"HCD"	"MS2"	"7.813044"	"374.4"	"100.000"	"40.2003"	"11343"	"11343"	"11320"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"555.0"	""	"505.6"	""	"564.6"	""	"568.6"	"8.3"	"661.8"	"680.8"	""	"305"	"26"	"31.000"	"24.000"	"0.0378677798557574"	""	"0.003449"	"0.03351"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDGLNR"	"[K].aLDGLNR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"494.29379"	"987.58031"	"987.57846"	"1.87"	"0.00092"	"5/50"	"5"	"50"	"6158026.81280518"	"HCD"	"MS2"	"5.907977"	"315.9"	"100.000"	"39.9974"	"11269"	"11269"	"11252"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"474.7"	""	"450.9"	""	"440.7"	""	"491.2"	"9.2"	"556.0"	"568.2"	""	"305"	"26"	"31.000"	"24.000"	"0.0400193327866127"	""	"0.004069"	"0.0442"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNADALR"	"[R].vnADALR.[A]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"494.78403"	"988.56078"	"988.56248"	"-1.72"	"-0.00085"	"6/58"	"6"	"58"	"2777947.57232666"	"HCD"	"MS2"	"46.42759"	"135.3"	"100.000"	"41.3549"	"11820"	"11820"	"11797"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"172.1"	""	"161.9"	""	"172.5"	""	"199.5"	"0.2"	"291.3"	"287.7"	""	"474"	"23"	"33.000"	"26.000"	"0.132968370319695"	"26"	"0.004069"	"0.04419"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNGITPR"	"[K].tnGITPR.[R]"	"N-Term(TMT6plex); N2(Deamidated)"	"3"	"3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5;Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5; Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"494.78421"	"988.56114"	"988.56248"	"-1.35"	"-0.00067"	"5/66"	"5"	"66"	"9537760.63989258"	"HCD"	"MS2"	"34.60898"	"463.9"	"100.000"	"28.4900"	"6605"	"6605"	"6582"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"733.2"	""	"599.6"	""	"617.7"	""	"640.4"	""	"787.8"	"1021.8"	""	"470"	"30"	"33.000"	"26.000"	"0.025531002155001"	""	"0.006739"	"0.07599"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNGITPR"	"[K].tnGITPR.[R]"	"N-Term(TMT6plex); N2(Deamidated)"	"3"	"3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5;Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5; Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"494.78430"	"988.56133"	"988.56248"	"-1.16"	"-0.00057"	"5/66"	"5"	"66"	"8346202.83276367"	"HCD"	"MS2"	"45.44064"	"405.7"	"100.000"	"28.5294"	"6607"	"6607"	"6585"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"630.3"	""	"536.6"	""	"571.2"	""	"539.4"	""	"683.2"	"886.8"	""	"472"	"29"	"33.000"	"26.000"	"0.0283734406569709"	""	"0.005921"	"0.06739"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNADALR"	"[R].vnADALR.[A]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"494.78445"	"988.56163"	"988.56248"	"-0.85"	"-0.00042"	"6/58"	"6"	"58"	"2508037.01556396"	"HCD"	"MS2"	"29.15604"	"124.9"	"100.000"	"41.5830"	"11903"	"11903"	"11881"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"160.7"	""	"160.5"	""	"145.4"	""	"196.8"	"1.2"	"255.7"	"265.6"	""	"478"	"24"	"33.000"	"26.000"	"0.0900322079571543"	""	"0.002973"	"0.03026"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDIAEGR"	"[R].vDIAEGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"494.78479"	"988.56230"	"988.56248"	"-0.17"	"-0.00009"	"5/54"	"5"	"54"	"8576320.58581543"	"HCD"	"MS2"	"29.65107"	"404.1"	"100.000"	"38.0269"	"10465"	"10465"	"10446"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"580.0"	""	"532.1"	""	"545.6"	""	"758.3"	""	"710.6"	"706.2"	""	"382"	"27"	"32.000"	"25.000"	"0.0359776976092552"	"22"	"0.003449"	"0.03377"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNGITPR"	"[K].tnGITPR.[R]"	"N-Term(TMT6plex); N2(Deamidated)"	"3"	"3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5;Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5; Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"494.78488"	"988.56249"	"988.56248"	"0.01"	"0.00001"	"5/66"	"5"	"66"	"3921993.20770264"	"HCD"	"MS2"	"11.33589"	"198.7"	"100.000"	"28.8577"	"6740"	"6740"	"6726"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"298.6"	""	"248.3"	""	"265.8"	""	"274.1"	""	"351.9"	"448.3"	""	"382"	"27"	"32.000"	"25.000"	"0.0414031484020562"	""	"0.00736"	"0.08781"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNGITPR"	"[K].tnGITPR.[R]"	"N-Term(TMT6plex); N2(Deamidated)"	"3"	"3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5;Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5; Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"494.78494"	"988.56261"	"988.56248"	"0.13"	"0.00007"	"5/66"	"5"	"66"	"4323382.61791992"	"HCD"	"MS2"	"3.247358"	"212.7"	"100.000"	"28.7837"	"6723"	"6723"	"6710"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"332.9"	""	"264.1"	""	"273.3"	""	"294.8"	""	"371.0"	"481.9"	""	"382"	"30"	"32.000"	"25.000"	"0.0194103500338303"	""	"0.003507"	"0.03629"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDIAEGR"	"[R].vDIAEGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"494.78540"	"988.56352"	"988.56248"	"1.06"	"0.00052"	"5/54"	"5"	"54"	"8024538.16369629"	"HCD"	"MS2"	"40.73456"	"383.5"	"100.000"	"38.1816"	"10520"	"10520"	"10501"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"555.7"	""	"512.8"	""	"505.6"	""	"719.1"	""	"685.7"	"653.1"	""	"387"	"30"	"32.000"	"25.000"	"0.019261094825752"	"24"	"0.001886"	"0.02126"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALNQGTR"	"[R].aLNQGTR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P70500"	"CDP-diacylglycerol--inositol 3-phosphatidyltransferase OS=Rattus norvegicus OX=10116 GN=Cdipt PE=1 SV=1"	"P70500"	"CDP-diacylglycerol--inositol 3-phosphatidyltransferase OS=Rattus norvegicus OX=10116 GN=Cdipt PE=1 SV=1"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"494.79004"	"988.57280"	"988.57371"	"-0.92"	"-0.00045"	"5/56"	"5"	"56"	"12406456.6724243"	"HCD"	"MS2"	"21.99213"	"769.5"	"100.000"	"21.7136"	"3848"	"3848"	"3829"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"863.7"	""	"851.0"	""	"902.0"	""	"1466.2"	""	"1676.0"	"1568.9"	""	"436"	"25"	"33.000"	"26.000"	"0.0659867127326084"	"23"	"0.004942"	"0.05453"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALNQGTR"	"[R].aLNQGTR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P70500"	"CDP-diacylglycerol--inositol 3-phosphatidyltransferase OS=Rattus norvegicus OX=10116 GN=Cdipt PE=1 SV=1"	"P70500"	"CDP-diacylglycerol--inositol 3-phosphatidyltransferase OS=Rattus norvegicus OX=10116 GN=Cdipt PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"494.79016"	"988.57305"	"988.57371"	"-0.67"	"-0.00033"	"5/56"	"5"	"56"	"12075600.5762939"	"HCD"	"MS2"	"23.60621"	"751.9"	"100.000"	"21.6582"	"3843"	"3843"	"3831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"862.7"	""	"833.9"	""	"867.3"	""	"1439.8"	""	"1626.3"	"1531.6"	""	"436"	"27"	"33.000"	"26.000"	"0.0484681556162006"	"24"	"0.00413"	"0.04555"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVATAIR"	"[K].eVATAIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"1"	"494.80261"	"988.59795"	"988.59886"	"-0.92"	"-0.00046"	"6/54"	"6"	"54"	"13515016.072937"	"HCD"	"MS2"	"17.78052"	"605.3"	"100.000"	"33.2302"	"8526"	"8526"	"8507"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"841.5"	""	"889.0"	""	"911.5"	""	"968.2"	""	"1089.9"	"1041.2"	""	"411"	"27"	"33.000"	"26.000"	"0.0380024701199995"	""	"0.008968"	"0.1158"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVATAIR"	"[K].eVATAIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.4138"	"0.0000"	"1"	"1"	"1"	"494.80286"	"988.59844"	"988.59886"	"-0.43"	"-0.00021"	"6/54"	"6"	"54"	"10498425.4896851"	"HCD"	"MS2"	"27.65339"	"491.0"	"100.000"	"33.2302"	"8519"	"8519"	"8498"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"704.9"	""	"716.0"	""	"718.0"	""	"785.8"	""	"872.9"	"858.9"	""	"366"	"29"	"32.000"	"25.000"	"0.0246292444792238"	""	"0.007627"	"0.09386"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVATAIR"	"[K].eVATAIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"494.80316"	"988.59905"	"988.59886"	"0.19"	"0.00009"	"9/54"	"9"	"54"	"11264538.9660034"	"HCD"	"MS2"	"0"	"375.5"	"71.740"	"33.5076"	"8631"	"8631"	"8620"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"504.1"	""	"520.7"	""	"570.9"	""	"582.8"	""	"703.3"	"682.4"	""	"366"	"29"	"32.000"	"25.000"	"0.0245160833798946"	""	"0.007808"	"0.09615"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQALSDR"	"[R].aQALSDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.3871"	"0.0000"	"1"	"1"	"1"	"495.28177"	"989.55626"	"989.55772"	"-1.48"	"-0.00073"	"6/60"	"6"	"60"	"9290725.5413208"	"HCD"	"MS2"	"54.62369"	"432.3"	"100.000"	"24.5297"	"4987"	"4987"	"4971"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"546.3"	""	"654.4"	""	"477.2"	""	"725.1"	""	"830.0"	"874.0"	""	"426"	"31"	"33.000"	"26.000"	"0.0168027205052752"	""	"0.002056"	"0.0223"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQALSDR"	"[R].aQALSDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"495.28186"	"989.55644"	"989.55772"	"-1.29"	"-0.00064"	"6/60"	"6"	"60"	"11618718.7504272"	"HCD"	"MS2"	"43.42632"	"530.6"	"100.000"	"24.4689"	"4978"	"4978"	"4963"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"641.0"	""	"783.9"	""	"630.1"	""	"892.8"	""	"1048.7"	"1040.4"	""	"425"	"30"	"33.000"	"26.000"	"0.020766290945311"	""	"0.002711"	"0.02625"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQESGR"	"[K].lAQESGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P41565"	"Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3g PE=1 SV=2"	"P41565"	"Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3g PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"495.28229"	"989.55730"	"989.55772"	"-0.43"	"-0.00021"	"5/58"	"5"	"58"	"7726342.97387695"	"HCD"	"MS2"	"28.84432"	"588.7"	"100.000"	"23.0439"	"4389"	"4389"	"4367"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"784.8"	""	"678.4"	""	"712.2"	""	"1058.2"	""	"1184.5"	"1170.3"	""	"393"	"16"	"32.000"	"25.000"	"0.472457290201362"	""	"0.005874"	"0.06706"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGINVR"	"[K].tTGINVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"495.29996"	"989.59264"	"989.59411"	"-1.49"	"-0.00074"	"6/54"	"6"	"54"	"8673888.44482422"	"HCD"	"MS2"	"0"	"419.9"	"100.000"	"30.5608"	"7445"	"7445"	"7426"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"592.2"	""	"523.5"	""	"525.6"	""	"760.0"	""	"807.1"	"777.7"	""	"405"	"24"	"33.000"	"26.000"	"0.0752358838921774"	"22"	"0.005001"	"0.05687"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGINVR"	"[K].tTGINVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"495.30093"	"989.59459"	"989.59411"	"0.49"	"0.00024"	"6/54"	"6"	"54"	"8031073.9821167"	"HCD"	"MS2"	"0"	"415.6"	"100.000"	"30.5729"	"7438"	"7438"	"7418"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"571.2"	""	"528.1"	""	"503.1"	""	"748.6"	""	"807.3"	"787.3"	""	"402"	"23"	"33.000"	"26.000"	"0.107447436238791"	"20"	"0.00447"	"0.04857"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDDTAR"	"[R].aLDDTAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"495.77423"	"990.54119"	"990.54174"	"-0.56"	"-0.00028"	"5/52"	"5"	"52"	"1821263.12188721"	"HCD"	"MS2"	"33.06442"	"130.5"	"100.000"	"26.1863"	"5655"	"5655"	"5640"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"134.5"	""	"121.1"	""	"113.7"	""	"256.8"	""	"306.4"	"312.1"	""	"478"	"28"	"33.000"	"26.000"	"0.0340720214870923"	""	"0.001374"	"0.01777"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDDTAR"	"[R].aLDDTAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"495.77423"	"990.54119"	"990.54174"	"-0.56"	"-0.00028"	"10/52"	"10"	"52"	"2002273.96112061"	"HCD"	"MS2"	"34.36427"	"138.5"	"100.000"	"26.0851"	"5630"	"5630"	"5611"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"123.1"	""	"127.7"	""	"123.6"	""	"269.4"	""	"325.9"	"351.5"	""	"478"	"23"	"33.000"	"26.000"	"0.112046398332718"	""	"0.004205"	"0.04594"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATTLAER"	"[K].aTTLAER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"0"	"2"	"2"	"0.4074"	"0.0000"	"1"	"1"	"1"	"495.79208"	"990.57689"	"990.57813"	"-1.25"	"-0.00062"	"5/56"	"5"	"56"	"4534040.06500244"	"HCD"	"MS2"	"9.336679"	"272.1"	"100.000"	"26.6892"	"5858"	"5858"	"5840"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"312.4"	""	"309.4"	""	"369.3"	""	"518.0"	"7.7"	"553.6"	"511.8"	""	"442"	"27"	"33.000"	"26.000"	"0.0463865714280799"	""	"0.004606"	"0.04958"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATTLAER"	"[K].aTTLAER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"0"	"2"	"2"	"0.3043"	"0.0000"	"1"	"1"	"1"	"495.79245"	"990.57762"	"990.57813"	"-0.51"	"-0.00025"	"6/56"	"6"	"56"	"2788666.93988037"	"HCD"	"MS2"	"14.80191"	"195.9"	"100.000"	"26.6886"	"5874"	"5874"	"5854"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"234.2"	""	"216.4"	""	"258.9"	""	"373.0"	"4.2"	"398.8"	"373.8"	""	"440"	"23"	"33.000"	"26.000"	"0.112570003818868"	""	"0.00447"	"0.04703"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSIADR"	"[R].vTSIADR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P09330; P60892"	"Ribose-phosphate pyrophosphokinase 2 OS=Rattus norvegicus OX=10116 GN=Prps2 PE=1 SV=3;Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus OX=10116 GN=Prps1 PE=1 SV=2"	"P09330; P60892"	"Ribose-phosphate pyrophosphokinase 2 OS=Rattus norvegicus OX=10116 GN=Prps2 PE=1 SV=3; Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus OX=10116 GN=Prps1 PE=1 SV=2"	"0"	"2"	"2"	"0.3939"	"0.0000"	"1"	"1"	"1"	"495.79263"	"990.57799"	"990.57813"	"-0.14"	"-0.00007"	"6/56"	"6"	"56"	"8922750.14691162"	"HCD"	"MS2"	"34.26208"	"443.8"	"100.000"	"34.5709"	"9066"	"9066"	"9047"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"611.8"	""	"556.1"	""	"584.5"	""	"824.4"	""	"813.6"	"814.8"	""	"437"	"33"	"33.000"	"26.000"	"0.0105791662317126"	""	"0.0023"	"0.02361"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFPDAR"	"[K].gTFPDAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"496.77142"	"992.53557"	"992.53626"	"-0.70"	"-0.00035"	"5/54"	"5"	"54"	"3102154.35888672"	"HCD"	"MS2"	"14.7402"	"195.7"	"100.000"	"33.8223"	"8765"	"8765"	"8747"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"249.9"	""	"265.6"	""	"222.6"	""	"332.7"	""	"392.2"	"397.5"	""	"388"	"20"	"32.000"	"25.000"	"0.194895463314009"	"24"	"0.004022"	"0.04354"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFPDAR"	"[K].gTFPDAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"496.77161"	"992.53594"	"992.53626"	"-0.33"	"-0.00016"	"10/54"	"10"	"54"	"12376819.2531128"	"HCD"	"MS2"	"5.375669"	"596.9"	"100.000"	"33.5146"	"8641"	"8641"	"8632"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"718.5"	""	"767.7"	""	"707.9"	""	"1005.6"	""	"1229.2"	"1248.7"	""	"377"	"24"	"32.000"	"25.000"	"0.0746984094571504"	"23"	"0.004542"	"0.04923"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFPDAR"	"[K].gTFPDAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"496.77185"	"992.53642"	"992.53626"	"0.17"	"0.00008"	"10/54"	"10"	"54"	"9896897.39477539"	"HCD"	"MS2"	"7.565825"	"480.7"	"100.000"	"33.5125"	"8633"	"8633"	"8620"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"616.9"	""	"602.1"	""	"568.0"	""	"831.5"	""	"972.0"	"979.1"	""	"377"	"22"	"32.000"	"25.000"	"0.107475965324921"	"22"	"0.003507"	"0.0368"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLDTTGR"	"[R].tLDTTGR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"496.78198"	"992.55669"	"992.55739"	"-0.71"	"-0.00035"	"5/56"	"5"	"56"	"3677787.48052979"	"HCD"	"MS2"	"27.23664"	"254.0"	"100.000"	"25.9800"	"5572"	"5572"	"5554"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"319.5"	""	"343.7"	""	"355.5"	""	"407.0"	""	"527.8"	"461.2"	""	"442"	"17"	"33.000"	"26.000"	"0.394813754042303"	"20"	"0.005369"	"0.06138"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLDTTGR"	"[R].tLDTTGR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"0"	"2"	"2"	"0.1176"	"0.0000"	"1"	"1"	"1"	"496.78217"	"992.55705"	"992.55739"	"-0.34"	"-0.00017"	"5/56"	"5"	"56"	"2785175.25579834"	"HCD"	"MS2"	"18.04936"	"205.9"	"100.000"	"25.9590"	"5579"	"5579"	"5559"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"268.3"	""	"276.9"	""	"273.4"	""	"322.7"	""	"411.2"	"402.2"	""	"436"	"17"	"33.000"	"26.000"	"0.437982233148703"	""	"0.005001"	"0.05679"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVPAAYR"	"[R].sVPAAYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"496.78983"	"992.57237"	"992.57265"	"-0.27"	"-0.00014"	"4/48"	"4"	"48"	"12428798.317749"	"HCD"	"MS2"	"40.49836"	"747.7"	"100.000"	"32.2028"	"8108"	"8108"	"8092"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"965.1"	""	"967.1"	""	"1016.7"	""	"1316.2"	""	"1416.1"	"1415.5"	""	"307"	"14"	"31.000"	"24.000"	"0.611094506799618"	"21"	"0.007872"	"0.09653"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVPAAYR"	"[R].sVPAAYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"496.78989"	"992.57250"	"992.57265"	"-0.15"	"-0.00007"	"4/48"	"4"	"48"	"12477360.1417847"	"HCD"	"MS2"	"41.94388"	"754.7"	"100.000"	"32.2450"	"8118"	"8118"	"8100"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"995.9"	""	"967.9"	""	"1066.9"	""	"1308.0"	""	"1417.5"	"1407.9"	""	"307"	"17"	"31.000"	"24.000"	"0.326669343558346"	"20"	"0.006443"	"0.07241"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSIDMSR"	"[K].gSIDMSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"497.76291"	"994.51854"	"994.51890"	"-0.36"	"-0.00018"	"6/56"	"6"	"56"	"10020357.8464966"	"HCD"	"MS2"	"52.13971"	"509.7"	"96.210"	"30.8500"	"7549"	"7549"	"7536"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"680.9"	""	"636.9"	""	"638.3"	""	"899.7"	""	"968.2"	"1022.6"	""	"342"	"15"	"32.000"	"25.000"	"0.545752973222229"	"18"	"0.004022"	"0.0435"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSIDMSR"	"[K].gSIDMSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"497.76300"	"994.51872"	"994.51890"	"-0.17"	"-0.00009"	"5/56"	"5"	"56"	"9143052.25"	"HCD"	"MS2"	"42.23984"	"522.5"	"100.000"	"30.8496"	"7560"	"7560"	"7547"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"690.5"	""	"645.0"	""	"694.5"	""	"844.2"	""	"1000.1"	"1088.3"	""	"342"	"16"	"32.000"	"25.000"	"0.442584408491178"	"21"	"0.004069"	"0.04373"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGDLFTR"	"[R].gGDLFTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63531"	"Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus OX=10116 GN=Rps6ka1 PE=1 SV=1"	"Q63531"	"Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus OX=10116 GN=Rps6ka1 PE=1 SV=1"	"0"	"2"	"2"	"0.0625"	"0.0000"	"1"	"1"	"1"	"497.77969"	"994.55211"	"994.55191"	"0.20"	"0.00010"	"9/54"	"9"	"54"	"3501039.53277588"	"HCD"	"MS2"	"33.6656"	"182.6"	"100.000"	"45.5029"	"13494"	"13494"	"13478"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"234.0"	""	"223.9"	""	"247.5"	""	"302.1"	""	"361.0"	"365.5"	""	"231"	"16"	"30.000"	"23.000"	"0.299627716324723"	""	"0.002973"	"0.0303"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGDLFTR"	"[R].gGDLFTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63531"	"Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus OX=10116 GN=Rps6ka1 PE=1 SV=1"	"Q63531"	"Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus OX=10116 GN=Rps6ka1 PE=1 SV=1"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"1"	"497.77969"	"994.55211"	"994.55191"	"0.20"	"0.00010"	"6/54"	"6"	"54"	"3531974.75769043"	"HCD"	"MS2"	"34.83118"	"181.6"	"100.000"	"45.3992"	"13463"	"13463"	"13447"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"225.6"	""	"222.0"	""	"260.5"	""	"316.6"	"1.0"	"356.6"	"339.9"	""	"231"	"23"	"30.000"	"23.000"	"0.0580205690898358"	""	"0.0023"	"0.02412"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFAVSER"	"[K].gFAVSER.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6I7R3"	"Isochorismatase domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Isoc1 PE=1 SV=1"	"Q6I7R3"	"Isochorismatase domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Isoc1 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"497.77975"	"994.55223"	"994.55191"	"0.32"	"0.00016"	"5/50"	"5"	"50"	"3524495.07269287"	"HCD"	"MS2"	"4.614367"	"175.6"	"100.000"	"36.4564"	"9831"	"9831"	"9810"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"280.3"	""	"252.8"	""	"279.5"	""	"253.7"	"2.1"	"296.4"	"295.9"	""	"232"	"28"	"30.000"	"23.000"	"0.0202515369738779"	"20"	"0.002937"	"0.02755"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFAVSER"	"[K].gFAVSER.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6I7R3"	"Isochorismatase domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Isoc1 PE=1 SV=1"	"Q6I7R3"	"Isochorismatase domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Isoc1 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"497.77994"	"994.55260"	"994.55191"	"0.69"	"0.00034"	"5/50"	"5"	"50"	"3537060.7331543"	"HCD"	"MS2"	"0"	"172.4"	"100.000"	"36.5793"	"9875"	"9875"	"9848"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"277.2"	""	"264.8"	""	"255.1"	""	"238.6"	""	"297.7"	"298.6"	""	"232"	"23"	"30.000"	"23.000"	"0.0625832322117548"	"19"	"0.004867"	"0.05193"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVAPPGGR"	"[R].iVAPPGGR.[AS]"	"N-Term(TMT6plex)"	"2"	"3"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62950; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"498.31302"	"995.61876"	"995.61993"	"-1.17"	"-0.00058"	"4/58"	"4"	"58"	"720551.893005371"	"HCD"	"MS2"	"63.78713"	"46.1"	"100.000"	"38.4590"	"10642"	"10642"	"10613"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.7"	""	"55.7"	""	"69.9"	""	"81.0"	"1.3"	"84.1"	"78.3"	""	"59"	"3"	"24.000"	"17.000"	"1.46832440068786"	"13"	"0.006443"	"0.07284"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAHQVAR"	"[R].sAHQVAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"499.29025"	"997.57323"	"997.57404"	"-0.82"	"-0.00041"	"6/54"	"6"	"54"	"4172508.84515381"	"HCD"	"MS2"	"0"	"192.7"	"100.000"	"18.5778"	"2617"	"2617"	"2607"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"313.1"	""	"221.3"	""	"278.9"	""	"305.2"	""	"343.9"	"367.7"	""	"141"	"28"	"28.000"	"21.000"	"0.0113289358337408"	"18"	"0.0023"	"0.02324"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAHQVAR"	"[R].sAHQVAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"499.29028"	"997.57329"	"997.57404"	"-0.76"	"-0.00038"	"6/54"	"6"	"54"	"6062497.96582031"	"HCD"	"MS2"	"0"	"266.8"	"100.000"	"18.5853"	"2616"	"2616"	"2604"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"417.4"	""	"304.9"	""	"387.6"	""	"415.3"	""	"520.0"	"486.9"	""	"141"	"27"	"28.000"	"21.000"	"0.012682039951658"	"19"	"0.001886"	"0.02136"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLPELGIK"	"[K].EVLPELGIK.[K]"	""	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"3"	"499.29974"	"997.59221"	"997.59282"	"-0.61"	"-0.00031"	"5/72"	"5"	"72"	"255284.164306641"	"HCD"	"MS2"	"14.71644"	"3.3"	"100.000"	"109.8711"	"38348"	"38348"	"38339"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.4"	""	"4.5"	""	"3.9"	""	"7.5"	""	"8.0"	"5.2"	"NoQuanLabels"	"120"	"8"	"27.000"	"20.000"	"0.867263862447557"	"20"	"0.005119"	"0.05787"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLWVGPR"	"[M].aASLWVGPR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"499.77216"	"998.53703"	"998.54179"	"-4.76"	"-0.00238"	"6/64"	"6"	"64"	"2266309.83966064"	"HCD"	"MS2"	"0"	"77.7"	"100.000"	"94.0528"	"32956"	"32956"	"32947"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.1"	""	"69.8"	""	"78.9"	""	"174.8"	""	"191.8"	"164.4"	"NoQuanLabels"	"203"	"20"	"30.000"	"23.000"	"0.0964863865561126"	"21"	"0.003111"	"0.03081"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLWVGPR"	"[M].aASLWVGPR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"499.77402"	"998.54076"	"998.54179"	"-1.03"	"-0.00052"	"7/64"	"7"	"64"	"1064245.50976563"	"HCD"	"MS2"	"25.37758"	"7.8"	"100.000"	"93.0072"	"32570"	"32570"	"32559"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.5"	""	"8.5"	""	"12.6"	""	"14.6"	""	"17.7"	"14.1"	"NoQuanLabels"	"199"	"58"	"29.000"	"22.000"	"1.53752816734072E-05"	""	"0"	"0.001197"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLWVGPR"	"[M].aASLWVGPR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"499.77420"	"998.54112"	"998.54179"	"-0.67"	"-0.00033"	"8/64"	"8"	"64"	"2625120.89477539"	"HCD"	"MS2"	"0.5057511"	"7.6"	"100.000"	"93.8165"	"32889"	"32889"	"32884"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.9"	""	"9.2"	""	"11.1"	""	"13.3"	""	"15.7"	"14.5"	"NoQuanLabels"	"199"	"64"	"29.000"	"22.000"	"3.60431783424615E-06"	""	"0"	"0.001093"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLWVGPR"	"[M].aASLWVGPR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7361"	"0.0000"	"1"	"1"	"1"	"499.77426"	"998.54125"	"998.54179"	"-0.55"	"-0.00027"	"8/64"	"8"	"64"	"3152428.61773682"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"93.7895"	"32861"	"32861"	"32856"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.6"	""	"5.3"	""	"12.4"	""	"7.4"	""	"11.9"	"10.4"	"NoQuanLabels"	"195"	"72"	"29.000"	"22.000"	"6.80776593975242E-07"	""	"0"	"0.0003935"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLWVGPR"	"[M].aASLWVGPR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"499.77481"	"998.54234"	"998.54179"	"0.55"	"0.00028"	"7/64"	"7"	"64"	"983065.403137207"	"HCD"	"MS2"	"3.753053"	"7.2"	"100.000"	"93.0212"	"32588"	"32588"	"32580"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.0"	""	"11.6"	""	"12.1"	""	"10.6"	""	"10.9"	"13.7"	"NoQuanLabels"	"191"	"51"	"29.000"	"22.000"	"7.48175308841732E-05"	""	"0"	"0.001176"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLWVGPR"	"[M].aASLWVGPR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"499.77496"	"998.54265"	"998.54179"	"0.86"	"0.00043"	"8/64"	"8"	"64"	"18390860.3181152"	"HCD"	"MS2"	"0"	"2.6"	"59.686"	"93.2941"	"32694"	"32694"	"32681"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.4"	"2.4"	"3.6"	""	"2.8"	""	"2.2"	""	"6.3"	"4.9"	"NoQuanLabels"	"189"	"70"	"29.000"	"22.000"	"9.78209347511982E-07"	""	"0"	"0.001477"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLWVGPR"	"[M].aASLWVGPR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"499.77518"	"998.54308"	"998.54179"	"1.29"	"0.00064"	"8/64"	"8"	"64"	"19847250.0289307"	"HCD"	"MS2"	"0"	"0.8"	"41.220"	"93.5629"	"32794"	"32794"	"32787"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	"3.6"	"2.5"	""	""	""	""	""	"2.1"	""	"NoQuanLabels"	"213"	"74"	"30.000"	"23.000"	"4.35862602612462E-07"	""	"0"	"0.001366"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLWVGPR"	"[M].aASLWVGPR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"499.77524"	"998.54320"	"998.54179"	"1.41"	"0.00070"	"8/64"	"8"	"64"	"21664800.5690918"	"HCD"	"MS2"	"0"	"1.4"	"42.771"	"93.5357"	"32767"	"32767"	"32763"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	"5.7"	""	""	""	""	"2.6"	""	""	"6.2"	"NoQuanLabels"	"213"	"72"	"30.000"	"23.000"	"7.03638522128091E-07"	""	"0"	"0.0001958"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLWVGPR"	"[M].aASLWVGPR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"499.77524"	"998.54320"	"998.54179"	"1.41"	"0.00070"	"8/64"	"8"	"64"	"17979850.3968506"	"HCD"	"MS2"	"0.04276977"	"2.7"	"58.974"	"93.2790"	"32673"	"32673"	"32666"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.0"	"4.2"	"3.8"	""	"3.3"	""	"3.6"	""	"5.5"	"3.8"	"NoQuanLabels"	"213"	"65"	"30.000"	"23.000"	"3.44627244630054E-06"	""	"0"	"0.0003004"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDIALP"	"[K].lEDIALP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"2"	"2"	"0.9649"	"0.0000"	"1"	"1"	"1"	"500.29941"	"999.59154"	"999.59238"	"-0.84"	"-0.00042"	"6/52"	"6"	"52"	"447810.360900879"	"HCD"	"MS2"	"5.218523"	"7.5"	"100.000"	"108.6459"	"37823"	"37823"	"37816"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.8"	""	"9.4"	""	"9.2"	""	"14.3"	""	"11.1"	"16.7"	""	"213"	"57"	"30.000"	"23.000"	"2.1151910869856E-05"	"18"	"0"	"0.002098"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDIALP"	"[K].lEDIALP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"500.29953"	"999.59178"	"999.59238"	"-0.60"	"-0.00030"	"5/52"	"5"	"52"	"184916.988830566"	"HCD"	"MS2"	"14.80872"	"4.6"	"100.000"	"108.8635"	"37986"	"37986"	"37981"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.4"	""	"4.1"	""	"8.0"	""	"4.5"	""	"10.1"	"11.4"	""	"213"	"29"	"30.000"	"23.000"	"0.0149399659535848"	"16"	"0.000936"	"0.0124"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDIALP"	"[K].lEDIALP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"500.29977"	"999.59227"	"999.59238"	"-0.11"	"-0.00005"	"5/52"	"5"	"52"	"161627.536376953"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"108.9130"	"37915"	"37915"	"37907"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.6"	""	"4.4"	""	"5.2"	""	"6.0"	""	"9.0"	"5.0"	""	"207"	"23"	"30.000"	"23.000"	"0.0486340402406398"	""	"0.001465"	"0.01842"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDIALP"	"[K].lEDIALP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"500.29987"	"999.59245"	"999.59238"	"0.08"	"0.00004"	"6/52"	"6"	"52"	"535749.183166504"	"HCD"	"MS2"	"4.606208"	"8.0"	"100.000"	"108.6068"	"37897"	"37897"	"37886"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.6"	""	"7.6"	""	"13.1"	""	"11.7"	""	"16.8"	"17.5"	""	"207"	"45"	"30.000"	"23.000"	"0.000340361437956643"	"23"	"0.0001301"	"0.003846"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPGVLDR"	"[K].dPGVLDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6B345"	"Protein S100-A11 OS=Rattus norvegicus OX=10116 GN=S100a11 PE=3 SV=1"	"Q6B345"	"Protein S100-A11 OS=Rattus norvegicus OX=10116 GN=S100a11 PE=3 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"500.78424"	"1000.56120"	"1000.56248"	"-1.27"	"-0.00064"	"5/58"	"5"	"58"	"3921134.78436279"	"HCD"	"MS2"	"20.61112"	"173.9"	"100.000"	"37.5885"	"10288"	"10288"	"10276"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"230.1"	""	"187.8"	""	"212.6"	""	"346.8"	"0.4"	"309.8"	"361.2"	""	"373"	"50"	"32.000"	"25.000"	"0.00016737047017439"	""	"0.0004639"	"0.007499"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPGVLDR"	"[K].dPGVLDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6B345"	"Protein S100-A11 OS=Rattus norvegicus OX=10116 GN=S100a11 PE=3 SV=1"	"Q6B345"	"Protein S100-A11 OS=Rattus norvegicus OX=10116 GN=S100a11 PE=3 SV=1"	"0"	"2"	"2"	"0.6222"	"0.0000"	"1"	"1"	"1"	"500.78473"	"1000.56218"	"1000.56248"	"-0.29"	"-0.00015"	"5/58"	"5"	"58"	"4634000.00360107"	"HCD"	"MS2"	"0"	"190.8"	"100.000"	"37.7847"	"10361"	"10361"	"10348"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"247.7"	""	"196.8"	""	"247.9"	""	"357.5"	"1.0"	"369.2"	"390.6"	""	"337"	"45"	"32.000"	"25.000"	"0.000514754207576814"	""	"0.0004639"	"0.007507"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPGVLDR"	"[K].dPGVLDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6B345"	"Protein S100-A11 OS=Rattus norvegicus OX=10116 GN=S100a11 PE=3 SV=1"	"Q6B345"	"Protein S100-A11 OS=Rattus norvegicus OX=10116 GN=S100a11 PE=3 SV=1"	"0"	"2"	"2"	"0.7255"	"0.0000"	"1"	"1"	"1"	"500.78500"	"1000.56273"	"1000.56248"	"0.26"	"0.00013"	"5/58"	"5"	"58"	"56441417.373291"	"HCD"	"MS2"	"0.8831699"	"477.1"	"22.721"	"37.8752"	"10403"	"10403"	"10388"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"492.9"	""	"456.9"	""	"573.4"	""	"957.0"	""	"963.9"	"1096.6"	""	"339"	"51"	"32.000"	"25.000"	"0.000137457899306226"	""	"0.000936"	"0.01159"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPGVLDR"	"[K].dPGVLDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6B345"	"Protein S100-A11 OS=Rattus norvegicus OX=10116 GN=S100a11 PE=3 SV=1"	"Q6B345"	"Protein S100-A11 OS=Rattus norvegicus OX=10116 GN=S100a11 PE=3 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"500.78528"	"1000.56328"	"1000.56248"	"0.80"	"0.00040"	"5/58"	"5"	"58"	"52915664.1118164"	"HCD"	"MS2"	"0.5444021"	"408.9"	"21.229"	"38.0623"	"10472"	"10472"	"10462"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"412.2"	""	"404.0"	""	"515.4"	""	"804.8"	""	"831.4"	"924.7"	""	"337"	"51"	"32.000"	"25.000"	"0.000136646938248372"	""	"0.0003538"	"0.006267"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGSQGPR"	"[R].gIGSQGPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P70560"	"Collagen alpha-1(XII) chain (Fragment) OS=Rattus norvegicus OX=10116 GN=Col12a1 PE=2 SV=1"	"P70560"	"Collagen alpha-1(XII) chain (Fragment) OS=Rattus norvegicus OX=10116 GN=Col12a1 PE=2 SV=1"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"500.78986"	"1000.57244"	"1000.57371"	"-1.27"	"-0.00064"	"7/62"	"7"	"62"	"2971616.29394531"	"HCD"	"MS2"	"3.003316"	"158.1"	"100.000"	"23.6176"	"4641"	"4641"	"4618"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"178.2"	""	"153.3"	""	"171.2"	""	"316.9"	"2.4"	"336.7"	"344.2"	""	"397"	"28"	"32.000"	"25.000"	"0.0288244156091167"	"17"	"0.003449"	"0.03294"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGSQGPR"	"[R].gIGSQGPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P70560"	"Collagen alpha-1(XII) chain (Fragment) OS=Rattus norvegicus OX=10116 GN=Col12a1 PE=2 SV=1"	"P70560"	"Collagen alpha-1(XII) chain (Fragment) OS=Rattus norvegicus OX=10116 GN=Col12a1 PE=2 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"500.79007"	"1000.57286"	"1000.57371"	"-0.85"	"-0.00042"	"7/62"	"7"	"62"	"3458135.14215088"	"HCD"	"MS2"	"0"	"183.2"	"100.000"	"23.6751"	"4647"	"4647"	"4629"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"190.0"	""	"176.3"	""	"181.8"	""	"353.9"	"3.4"	"439.6"	"399.5"	""	"397"	"29"	"32.000"	"25.000"	"0.0241969435386586"	"17"	"0.002711"	"0.02583"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTNPNAR"	"[R].vTNPNAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"500.79013"	"1000.57298"	"1000.57371"	"-0.72"	"-0.00036"	"6/56"	"6"	"56"	"14811015.5194092"	"HCD"	"MS2"	"3.9092"	"639.4"	"100.000"	"21.4380"	"3754"	"3754"	"3728"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"976.8"	""	"831.7"	""	"908.1"	""	"1098.4"	"0.6"	"1194.7"	"1043.6"	""	"397"	"22"	"32.000"	"25.000"	"0.129050743533104"	"25"	"0.005874"	"0.06677"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTNPNAR"	"[R].vTNPNAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"500.79028"	"1000.57329"	"1000.57371"	"-0.42"	"-0.00021"	"5/56"	"5"	"56"	"15596213.965271"	"HCD"	"MS2"	"0"	"722.2"	"100.000"	"21.5028"	"3762"	"3762"	"3742"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1091.2"	""	"937.1"	""	"1033.4"	""	"1254.8"	""	"1381.2"	"1140.8"	""	"397"	"25"	"32.000"	"25.000"	"0.0688272648148276"	"24"	"0.004942"	"0.05457"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPSVVVR"	"[K].dPSVVVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"500.80255"	"1000.59783"	"1000.59886"	"-1.03"	"-0.00052"	"6/52"	"6"	"52"	"6814605.74859619"	"HCD"	"MS2"	"0"	"257.6"	"100.000"	"37.1373"	"10108"	"10108"	"10090"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"330.1"	""	"302.1"	""	"337.7"	""	"405.8"	"7.9"	"525.2"	"536.4"	""	"371"	"25"	"32.000"	"25.000"	"0.0617083471360378"	""	"0.003449"	"0.0347"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPITGR"	"[K].lDPITGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"500.80258"	"1000.59789"	"1000.59886"	"-0.97"	"-0.00049"	"5/54"	"5"	"54"	"4875582.75030518"	"HCD"	"MS2"	"34.95931"	"172.0"	"100.000"	"49.6946"	"15202"	"15202"	"15185"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"237.0"	""	"199.8"	""	"175.8"	""	"334.9"	""	"326.9"	"358.1"	""	"371"	"30"	"32.000"	"25.000"	"0.0177968817146206"	""	"0.002547"	"0.02527"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPITGR"	"[K].lDPITGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"500.80261"	"1000.59795"	"1000.59886"	"-0.91"	"-0.00046"	"5/54"	"5"	"54"	"13268039.2546997"	"HCD"	"MS2"	"1.066221"	"336.5"	"73.011"	"49.6779"	"15207"	"15207"	"15190"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"436.2"	""	"394.0"	""	"353.6"	""	"639.6"	""	"689.1"	"688.7"	""	"371"	"33"	"32.000"	"25.000"	"0.00931845503564028"	""	"0.003111"	"0.03153"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPITGR"	"[K].lDPITGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"0"	"2"	"2"	"0.5517"	"0.0000"	"1"	"1"	"1"	"500.80267"	"1000.59807"	"1000.59886"	"-0.79"	"-0.00040"	"5/54"	"5"	"54"	"5403654.88623047"	"HCD"	"MS2"	"32.29773"	"205.0"	"100.000"	"49.3713"	"15081"	"15081"	"15063"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"289.9"	""	"243.0"	""	"230.5"	""	"406.6"	""	"389.1"	"389.5"	""	"371"	"29"	"32.000"	"25.000"	"0.0241181456725175"	""	"0.001374"	"0.01784"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPLIGR"	"[K].sEPLIGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"500.80280"	"1000.59831"	"1000.59886"	"-0.55"	"-0.00027"	"5/50"	"5"	"50"	"3545465.00811768"	"HCD"	"MS2"	"28.838"	"163.9"	"100.000"	"38.7911"	"10768"	"10768"	"10741"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"222.3"	""	"213.9"	""	"192.0"	""	"275.5"	"9.4"	"321.9"	"319.7"	""	"371"	"25"	"32.000"	"25.000"	"0.0531305013417671"	""	"0.007627"	"0.09127"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GESIPIR"	"[K].gESIPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"500.80280"	"1000.59831"	"1000.59886"	"-0.55"	"-0.00027"	"6/50"	"6"	"50"	"10148510.9554443"	"HCD"	"MS2"	"14.76074"	"299.9"	"80.223"	"40.3452"	"11402"	"11402"	"11382"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"395.2"	""	"354.3"	""	"398.3"	""	"491.7"	"6.5"	"590.8"	"608.7"	""	"371"	"21"	"32.000"	"25.000"	"0.159714341030243"	"20"	"0.005001"	"0.05647"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GESIPIR"	"[K].gESIPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"500.80286"	"1000.59844"	"1000.59886"	"-0.42"	"-0.00021"	"6/50"	"6"	"50"	"13094867.2452393"	"HCD"	"MS2"	"12.00601"	"363.0"	"76.568"	"40.1283"	"11322"	"11322"	"11310"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"465.0"	""	"439.4"	""	"449.7"	""	"611.1"	"7.4"	"714.3"	"758.4"	""	"371"	"22"	"32.000"	"25.000"	"0.130119957856905"	"20"	"0.004676"	"0.05034"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPSVVVR"	"[K].dPSVVVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"500.80301"	"1000.59874"	"1000.59886"	"-0.12"	"-0.00006"	"6/52"	"6"	"52"	"6147525.11425781"	"HCD"	"MS2"	"20.33671"	"238.6"	"100.000"	"36.8472"	"9990"	"9990"	"9969"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"314.2"	""	"303.8"	""	"323.6"	""	"355.4"	"11.1"	"483.5"	"472.8"	""	"304"	"30"	"31.000"	"24.000"	"0.0151301623437432"	""	"0.002379"	"0.02443"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPSVVVR"	"[K].dPSVVVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"500.80304"	"1000.59880"	"1000.59886"	"-0.06"	"-0.00003"	"6/52"	"6"	"52"	"7578543.09979248"	"HCD"	"MS2"	"12.5024"	"283.3"	"100.000"	"37.0621"	"10072"	"10072"	"10050"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"370.3"	""	"376.0"	""	"370.8"	""	"445.9"	"1.9"	"563.1"	"560.1"	""	"304"	"30"	"31.000"	"24.000"	"0.0147857578014099"	""	"0.0023"	"0.02367"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPITGR"	"[K].lDPITGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"500.80307"	"1000.59886"	"1000.59886"	"0.00"	"0.00000"	"5/54"	"5"	"54"	"13272728.3376465"	"HCD"	"MS2"	"0.698667"	"353.6"	"73.618"	"50.0011"	"15327"	"15327"	"15310"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"446.1"	""	"384.6"	""	"390.1"	""	"694.9"	""	"712.0"	"731.2"	""	"304"	"33"	"31.000"	"24.000"	"0.00767085172296563"	""	"0.0023"	"0.02373"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVGQAAIR"	"[R].gVGQAAIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"500.80798"	"1000.60869"	"1000.61009"	"-1.40"	"-0.00070"	"7/66"	"7"	"66"	"37849220.1982422"	"HCD"	"MS2"	"0"	"389.4"	"23.180"	"28.9053"	"6773"	"6773"	"6758"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"546.7"	""	"518.3"	""	"571.7"	""	"612.5"	""	"693.9"	"753.5"	""	"310"	"39"	"31.000"	"24.000"	"0.00184217845252738"	""	"0.0001301"	"0.004316"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVGQAAIR"	"[R].gVGQAAIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"500.80811"	"1000.60893"	"1000.61009"	"-1.16"	"-0.00058"	"7/66"	"7"	"66"	"22720844.9562988"	"HCD"	"MS2"	"0.2341362"	"316.0"	"29.937"	"28.9979"	"6797"	"6797"	"6779"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"430.4"	""	"439.1"	""	"452.5"	""	"513.3"	""	"565.0"	"599.4"	""	"310"	"37"	"31.000"	"24.000"	"0.00332148043173609"	""	"0"	"0.00327"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVGQAAIR"	"[R].gVGQAAIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"500.80890"	"1000.61052"	"1000.61009"	"0.43"	"0.00021"	"7/66"	"7"	"66"	"36571484.3898926"	"HCD"	"MS2"	"0"	"540.0"	"31.373"	"28.6300"	"6662"	"6662"	"6648"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"781.1"	""	"797.9"	""	"761.5"	""	"838.0"	"2.5"	"940.6"	"991.2"	""	"248"	"38"	"30.000"	"23.000"	"0.00202965248657048"	"21"	"0"	"0.002499"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVGQAAIR"	"[R].gVGQAAIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"500.80899"	"1000.61070"	"1000.61009"	"0.61"	"0.00030"	"7/66"	"7"	"66"	"33616981.8791504"	"HCD"	"MS2"	"0"	"602.5"	"38.175"	"28.6948"	"6675"	"6675"	"6663"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"852.9"	""	"858.6"	""	"869.6"	""	"948.8"	""	"1020.2"	"1160.3"	""	"248"	"39"	"30.000"	"23.000"	"0.00167656997836091"	""	"0.0001301"	"0.004264"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAGLNR"	"[R].lEAGLNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"501.30002"	"1001.59276"	"1001.59411"	"-1.35"	"-0.00067"	"4/50"	"4"	"50"	"8142597.31072998"	"HCD"	"MS2"	"3.175011"	"397.8"	"100.000"	"39.8461"	"11198"	"11198"	"11181"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"397.3"	""	"479.4"	""	"437.6"	""	"742.0"	""	"853.1"	"878.3"	""	"408"	"24"	"33.000"	"26.000"	"0.0874238981610777"	"24"	"0.005309"	"0.05963"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSPLVSR"	"[K].nSPLVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.5517"	"0.0000"	"1"	"1"	"1"	"501.30008"	"1001.59288"	"1001.59411"	"-1.23"	"-0.00061"	"6/68"	"6"	"68"	"14312409.1286011"	"HCD"	"MS2"	"6.640226"	"614.3"	"100.000"	"28.4028"	"6569"	"6569"	"6550"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"973.0"	""	"723.4"	""	"857.2"	""	"1024.7"	""	"1038.1"	"1203.0"	""	"408"	"29"	"33.000"	"26.000"	"0.0249247130673634"	""	"0.003717"	"0.03825"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAGLNR"	"[R].lEAGLNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"501.30020"	"1001.59313"	"1001.59411"	"-0.98"	"-0.00049"	"4/50"	"4"	"50"	"5414630.15820313"	"HCD"	"MS2"	"0"	"260.9"	"100.000"	"39.6293"	"11119"	"11119"	"11094"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"277.7"	""	"307.4"	""	"298.5"	""	"468.4"	"2.5"	"572.4"	"553.8"	""	"404"	"24"	"33.000"	"26.000"	"0.0889920824283238"	""	"0.004942"	"0.05284"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSPLVSR"	"[K].nSPLVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"501.30023"	"1001.59319"	"1001.59411"	"-0.92"	"-0.00046"	"6/68"	"6"	"68"	"11401724.1401978"	"HCD"	"MS2"	"6.241628"	"468.1"	"100.000"	"28.4470"	"6573"	"6573"	"6553"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"741.9"	"3.3"	"567.6"	""	"660.2"	""	"748.2"	""	"795.0"	"918.9"	""	"404"	"23"	"33.000"	"26.000"	"0.10100697606535"	"26"	"0.005119"	"0.0584"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDQAQR"	"[K].vGDQAQR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.2381"	"0.0000"	"1"	"1"	"1"	"501.78067"	"1002.55406"	"1002.55297"	"1.09"	"0.00055"	"5/54"	"5"	"54"	"1699457.11669922"	"HCD"	"MS2"	"0"	"112.4"	"100.000"	"20.4948"	"3359"	"3359"	"3345"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"173.2"	""	"129.7"	""	"153.1"	""	"185.5"	""	"212.2"	"212.6"	""	"462"	"21"	"33.000"	"26.000"	"0.180140755530873"	""	"0.005829"	"0.06522"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEDLGR"	"[K].aLEDLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"501.79202"	"1002.57677"	"1002.57813"	"-1.35"	"-0.00068"	"5/50"	"5"	"50"	"4965617.64031982"	"HCD"	"MS2"	"46.16896"	"217.4"	"100.000"	"47.8526"	"14462"	"14462"	"14448"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"461.1"	""	"284.0"	""	"306.9"	""	"284.1"	"2.2"	"364.6"	"351.4"	""	"524"	"17"	"34.000"	"27.000"	"0.480066378661257"	"21"	"0.005874"	"0.06569"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEDLGR"	"[K].aLEDLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"501.79230"	"1002.57732"	"1002.57813"	"-0.81"	"-0.00040"	"6/50"	"6"	"50"	"3860509.26977539"	"HCD"	"MS2"	"42.93481"	"190.4"	"100.000"	"48.1030"	"14552"	"14552"	"14533"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"398.6"	""	"251.7"	""	"264.8"	""	"253.0"	""	"319.7"	"311.6"	""	"520"	"20"	"34.000"	"27.000"	"0.246588800458233"	"22"	"0.004022"	"0.04313"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDSPSR"	"[R].vLDSPSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P84060"	"Dystrobrevin beta OS=Rattus norvegicus OX=10116 GN=Dtnb PE=1 SV=2"	"P84060"	"Dystrobrevin beta OS=Rattus norvegicus OX=10116 GN=Dtnb PE=1 SV=2"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"3"	"501.79236"	"1002.57744"	"1002.57813"	"-0.68"	"-0.00034"	"4/54"	"4"	"54"	"2316306.06610107"	"HCD"	"MS2"	"45.2727"	"149.4"	"100.000"	"32.0971"	"8066"	"8066"	"8041"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"195.8"	""	"178.2"	""	"233.8"	""	"231.6"	"0.8"	"284.7"	"291.4"	""	"520"	"9"	"34.000"	"27.000"	"3.15481101120894"	"20"	"0.005874"	"0.06571"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADAEVLR"	"[R].aDAEVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.4074"	"0.0000"	"1"	"1"	"1"	"501.79257"	"1002.57787"	"1002.57813"	"-0.26"	"-0.00013"	"9/52"	"9"	"52"	"22373187.6735229"	"HCD"	"MS2"	"4.431798"	"796.5"	"82.226"	"36.1443"	"9705"	"9705"	"9691"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1059.1"	""	"941.0"	""	"1046.5"	""	"1471.8"	""	"1461.0"	"1572.9"	""	"414"	"27"	"33.000"	"26.000"	"0.0458110604888367"	""	"0.004022"	"0.04252"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDSPSR"	"[R].vLDSPSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P84060"	"Dystrobrevin beta OS=Rattus norvegicus OX=10116 GN=Dtnb PE=1 SV=2"	"P84060"	"Dystrobrevin beta OS=Rattus norvegicus OX=10116 GN=Dtnb PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"501.79260"	"1002.57793"	"1002.57813"	"-0.20"	"-0.00010"	"10/54"	"10"	"54"	"2421558.41589355"	"HCD"	"MS2"	"34.70924"	"149.6"	"100.000"	"32.1070"	"8062"	"8062"	"8038"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"209.1"	""	"184.1"	""	"207.3"	""	"247.3"	""	"276.2"	"295.3"	""	"404"	"5"	"33.000"	"26.000"	"6.24239677367745"	"16"	"0.006379"	"0.07222"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPSIVR"	"[K].sDPSIVR.[L]"	"N-Term(TMT6plex)"	"1"	"3"	"P62749"	"Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"Q5PQN0; P84076; P62749"	"Neurocalcin-delta OS=Rattus norvegicus OX=10116 GN=Ncald PE=1 SV=3; Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2; Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"501.79282"	"1002.57836"	"1002.57813"	"0.23"	"0.00012"	"6/54"	"6"	"54"	"7216633.07434082"	"HCD"	"MS2"	"0"	"299.9"	"100.000"	"30.0448"	"7235"	"7235"	"7216"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"327.7"	""	"353.4"	""	"356.2"	""	"561.7"	"34.9"	"608.7"	"606.0"	""	"413"	"22"	"33.000"	"26.000"	"0.122721330754116"	"24"	"0.003717"	"0.03864"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADAEVLR"	"[R].aDAEVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"501.79282"	"1002.57836"	"1002.57813"	"0.23"	"0.00012"	"6/52"	"6"	"52"	"30405111.0550537"	"HCD"	"MS2"	"0"	"535.1"	"39.390"	"36.4428"	"9826"	"9826"	"9810"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"652.4"	""	"587.8"	""	"709.1"	""	"974.1"	""	"1000.8"	"1160.5"	""	"413"	"26"	"33.000"	"26.000"	"0.0516321317190313"	""	"0.004942"	"0.05461"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDSPSR"	"[R].vLDSPSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P84060"	"Dystrobrevin beta OS=Rattus norvegicus OX=10116 GN=Dtnb PE=1 SV=2"	"P84060"	"Dystrobrevin beta OS=Rattus norvegicus OX=10116 GN=Dtnb PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"501.79291"	"1002.57854"	"1002.57813"	"0.41"	"0.00021"	"4/54"	"4"	"54"	"2987751.59411621"	"HCD"	"MS2"	"31.55774"	"176.2"	"100.000"	"32.0169"	"8033"	"8033"	"8013"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"233.0"	""	"230.9"	""	"260.5"	""	"270.4"	""	"323.9"	"353.3"	""	"413"	"21"	"33.000"	"26.000"	"0.149251964443848"	"20"	"0.004431"	"0.04642"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADAEVLR"	"[R].aDAEVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"501.79297"	"1002.57866"	"1002.57813"	"0.53"	"0.00027"	"6/52"	"6"	"52"	"12442665.2989502"	"HCD"	"MS2"	"0"	"542.6"	"100.000"	"36.2535"	"9743"	"9743"	"9736"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"748.3"	""	"629.5"	""	"707.8"	""	"991.4"	""	"992.8"	"1076.1"	""	"413"	"26"	"33.000"	"26.000"	"0.0518704548106728"	""	"0.003967"	"0.0423"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADAEVLR"	"[R].aDAEVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"501.79306"	"1002.57884"	"1002.57813"	"0.72"	"0.00036"	"6/52"	"6"	"52"	"46133229.890625"	"HCD"	"MS2"	"0"	"508.3"	"24.186"	"36.5541"	"9865"	"9865"	"9848"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"652.2"	""	"561.7"	""	"678.2"	""	"903.4"	""	"940.7"	"1092.6"	""	"412"	"26"	"33.000"	"26.000"	"0.0518641447118325"	""	"0.00413"	"0.04511"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGIDDVR"	"[K].vGIDDVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2Z5"	"Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Cmtr1 PE=1 SV=1"	"Q5U2Z5"	"Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Cmtr1 PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"501.79358"	"1002.57988"	"1002.57813"	"1.75"	"0.00088"	"6/50"	"6"	"50"	"2405916.96069336"	"HCD"	"MS2"	"49.307"	"115.9"	"100.000"	"43.7275"	"12778"	"12778"	"12762"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"169.5"	""	"162.2"	""	"160.5"	""	"162.1"	"0.1"	"239.9"	"204.1"	""	"408"	"12"	"33.000"	"26.000"	"1.22357379556124"	"23"	"0.008901"	"0.1155"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVADTR"	"[K].lVVADTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"501.81052"	"1002.61376"	"1002.61451"	"-0.75"	"-0.00038"	"4/50"	"4"	"50"	"7803848.79229736"	"HCD"	"MS2"	"16.35265"	"343.9"	"100.000"	"41.7944"	"11989"	"11989"	"11970"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"505.9"	""	"479.9"	""	"483.6"	""	"516.2"	""	"635.0"	"644.1"	""	"388"	"28"	"32.000"	"25.000"	"0.0283009966493417"	""	"0.003111"	"0.03094"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEVLISR"	"[K].gEVLISR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"501.81055"	"1002.61382"	"1002.61451"	"-0.69"	"-0.00035"	"6/56"	"6"	"56"	"4631136.08972168"	"HCD"	"MS2"	"0"	"219.4"	"100.000"	"41.3204"	"11806"	"11806"	"11785"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"317.8"	""	"291.5"	""	"277.0"	""	"358.9"	""	"419.0"	"418.2"	""	"388"	"26"	"32.000"	"25.000"	"0.0458988421312237"	""	"0.005119"	"0.05842"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVADTR"	"[K].lVVADTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"501.81061"	"1002.61394"	"1002.61451"	"-0.57"	"-0.00029"	"5/50"	"5"	"50"	"9956197.71063232"	"HCD"	"MS2"	"0.3734909"	"236.6"	"100.000"	"41.9091"	"12046"	"12046"	"12028"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"336.1"	"1.4"	"316.6"	""	"347.4"	""	"369.8"	""	"440.0"	"435.7"	""	"388"	"46"	"32.000"	"25.000"	"0.000535552104106746"	""	"0.0005778"	"0.008097"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVADTR"	"[K].lVVADTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"501.81070"	"1002.61412"	"1002.61451"	"-0.39"	"-0.00019"	"5/50"	"5"	"50"	"6853905.00909424"	"HCD"	"MS2"	"0"	"181.7"	"100.000"	"42.1029"	"12115"	"12115"	"12097"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"251.2"	"1.8"	"244.4"	""	"247.3"	""	"295.9"	"1.1"	"349.1"	"332.3"	""	"388"	"45"	"32.000"	"25.000"	"0.000569904032480537"	""	"0.000936"	"0.01162"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEVLISR"	"[K].gEVLISR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"501.81110"	"1002.61492"	"1002.61451"	"0.40"	"0.00020"	"6/56"	"6"	"56"	"5102650.20465088"	"HCD"	"MS2"	"11.6467"	"235.8"	"100.000"	"41.4841"	"11863"	"11863"	"11848"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"333.8"	""	"318.4"	""	"292.8"	""	"380.0"	""	"458.5"	"456.4"	""	"342"	"26"	"32.000"	"25.000"	"0.0386363516707787"	""	"0.00436"	"0.04624"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSQDGR"	"[R].lVSQDGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"502.29025"	"1003.57323"	"1003.57337"	"-0.15"	"-0.00007"	"4/58"	"4"	"58"	"16054178.5028687"	"HCD"	"MS2"	"34.23489"	"500.9"	"75.846"	"27.8064"	"6312"	"6312"	"6294"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"637.4"	""	"521.9"	""	"606.7"	""	"960.2"	""	"1004.7"	"1026.6"	""	"370"	"27"	"32.000"	"25.000"	"0.0352510232823201"	"20"	"0.004942"	"0.05493"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSQDGR"	"[R].lVSQDGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"502.29047"	"1003.57366"	"1003.57337"	"0.28"	"0.00014"	"4/58"	"4"	"58"	"15921141.0645752"	"HCD"	"MS2"	"48.04631"	"624.2"	"94.945"	"27.7326"	"6297"	"6297"	"6279"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"798.5"	""	"674.4"	""	"780.7"	""	"1117.6"	""	"1277.6"	"1279.9"	""	"385"	"27"	"32.000"	"25.000"	"0.0389431191895567"	"21"	"0.005427"	"0.06249"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELPSSR"	"[R].sELPSSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"502.78177"	"1004.55626"	"1004.55739"	"-1.12"	"-0.00056"	"5/58"	"5"	"58"	"5686660.74133301"	"HCD"	"MS2"	"19.07985"	"305.7"	"100.000"	"25.4035"	"5353"	"5353"	"5329"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"438.8"	""	"416.1"	""	"442.4"	""	"478.4"	""	"554.5"	"568.2"	""	"492"	"28"	"33.000"	"26.000"	"0.0431454603453074"	"22"	"0.005119"	"0.05847"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELPSSR"	"[R].sELPSSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"502.78198"	"1004.55669"	"1004.55739"	"-0.70"	"-0.00035"	"5/58"	"5"	"58"	"6728962.95715332"	"HCD"	"MS2"	"13.46363"	"322.6"	"100.000"	"25.4910"	"5374"	"5374"	"5349"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"492.9"	""	"453.5"	""	"461.2"	""	"503.9"	""	"565.2"	"580.1"	""	"488"	"28"	"33.000"	"26.000"	"0.0402151623532224"	""	"0.005874"	"0.06556"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASNVTNK"	"[M].aSNVTNk.[T]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"502.78214"	"1004.55699"	"1004.55739"	"-0.40"	"-0.00020"	"4/62"	"4"	"62"	"8290566.84759521"	"HCD"	"MS2"	"41.51289"	"306.2"	"100.000"	"33.0785"	"8457"	"8457"	"8441"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"329.9"	""	"237.0"	""	"205.5"	""	"662.9"	""	"734.1"	"752.8"	""	"488"	"21"	"33.000"	"26.000"	"0.188100446451721"	"22"	"0.008522"	"0.1055"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELPSSR"	"[R].sELPSSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"502.78217"	"1004.55705"	"1004.55739"	"-0.33"	"-0.00017"	"5/58"	"5"	"58"	"2670867.23828125"	"HCD"	"MS2"	"9.041999"	"206.3"	"100.000"	"25.6998"	"5473"	"5473"	"5450"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"281.6"	""	"252.9"	""	"260.6"	""	"318.5"	"3.7"	"405.7"	"434.3"	""	"488"	"21"	"33.000"	"26.000"	"0.201089700063172"	"20"	"0.00736"	"0.08659"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGVAEPR"	"[K].fGVAEPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11951"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3"	"P11951"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"502.78955"	"1004.57182"	"1004.57265"	"-0.82"	"-0.00041"	"5/48"	"5"	"48"	"5483399.96716309"	"HCD"	"MS2"	"16.09996"	"230.9"	"100.000"	"44.6626"	"13163"	"13163"	"13141"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"286.8"	""	"341.8"	""	"335.8"	""	"363.1"	"0.1"	"408.2"	"452.3"	""	"469"	"30"	"33.000"	"26.000"	"0.0249541537773602"	""	"0.003922"	"0.0394"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGVAEPR"	"[K].fGVAEPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11951"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3"	"P11951"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"502.78961"	"1004.57195"	"1004.57265"	"-0.70"	"-0.00035"	"5/48"	"5"	"48"	"5341777.41711426"	"HCD"	"MS2"	"14.27812"	"224.2"	"100.000"	"44.7965"	"13206"	"13206"	"13184"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"271.6"	""	"338.0"	""	"340.7"	""	"329.4"	"1.8"	"405.7"	"437.5"	""	"469"	"27"	"33.000"	"26.000"	"0.0422807660231568"	""	"0.00413"	"0.04504"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGAISTAR"	"[R].tGAISTAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07116"	"Sulfite oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suox PE=1 SV=2"	"Q07116"	"Sulfite oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suox PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"503.29681"	"1005.58635"	"1005.58902"	"-2.66"	"-0.00134"	"6/66"	"6"	"66"	"3937842.0715332"	"HCD"	"MS2"	"32.86117"	"288.6"	"100.000"	"24.5344"	"4989"	"4989"	"4971"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"399.6"	""	"376.6"	""	"393.9"	""	"420.7"	""	"600.8"	"551.6"	""	"357"	"12"	"32.000"	"25.000"	"1.09053151445645"	"13"	"0.004938"	"0.05269"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGAISTAR"	"[R].tGAISTAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07116"	"Sulfite oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suox PE=1 SV=2"	"Q07116"	"Sulfite oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suox PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"503.29794"	"1005.58861"	"1005.58902"	"-0.41"	"-0.00021"	"6/66"	"6"	"66"	"4570470.06005859"	"HCD"	"MS2"	"21.8638"	"316.7"	"100.000"	"24.4459"	"4969"	"4969"	"4947"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"420.3"	""	"400.9"	""	"444.8"	""	"442.4"	""	"676.5"	"622.4"	""	"361"	"17"	"32.000"	"25.000"	"0.365154961751428"	"14"	"0.003449"	"0.03543"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMVGDR"	"[R].tVMVGDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"503.78061"	"1006.55394"	"1006.55528"	"-1.33"	"-0.00067"	"6/58"	"6"	"58"	"3707768.23754883"	"HCD"	"MS2"	"48.78452"	"224.6"	"100.000"	"32.6278"	"8281"	"8281"	"8259"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"291.8"	""	"263.0"	""	"306.8"	""	"334.7"	""	"462.7"	"477.8"	""	"456"	"20"	"33.000"	"26.000"	"0.206983080880626"	"19"	"0.003111"	"0.03053"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMVGDR"	"[R].tVMVGDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"503.78064"	"1006.55400"	"1006.55528"	"-1.27"	"-0.00064"	"6/58"	"6"	"58"	"3359271.19042969"	"HCD"	"MS2"	"53.48481"	"218.7"	"100.000"	"32.6466"	"8282"	"8282"	"8259"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"271.3"	""	"242.3"	""	"301.3"	""	"309.3"	""	"475.6"	"479.3"	""	"456"	"25"	"33.000"	"26.000"	"0.0803405585976869"	"20"	"0.003449"	"0.03483"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMMEGGR"	"[K].vMMEGGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.3810"	"0.0000"	"1"	"1"	"1"	"504.76181"	"1008.51634"	"1008.51679"	"-0.44"	"-0.00022"	"4/48"	"4"	"48"	"6250408.12512207"	"HCD"	"MS2"	"30.20968"	"328.5"	"100.000"	"33.9490"	"8813"	"8813"	"8792"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"481.9"	""	"451.9"	""	"431.9"	""	"444.2"	""	"650.8"	"660.1"	""	"441"	"21"	"33.000"	"26.000"	"0.159738129196535"	""	"0.003967"	"0.04191"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMMEGGR"	"[K].vMMEGGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"504.76184"	"1008.51641"	"1008.51679"	"-0.38"	"-0.00019"	"4/48"	"4"	"48"	"4081667.44519043"	"HCD"	"MS2"	"45.1604"	"213.1"	"100.000"	"33.8893"	"8786"	"8786"	"8769"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"286.3"	""	"298.6"	""	"288.4"	""	"321.2"	""	"429.3"	"401.4"	""	"441"	"18"	"33.000"	"26.000"	"0.312902183532445"	"25"	"0.00736"	"0.08686"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEAGYR"	"[R].lAEAGYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"504.78702"	"1008.56676"	"1008.56756"	"-0.80"	"-0.00040"	"6/48"	"6"	"48"	"10486512.9581909"	"HCD"	"MS2"	"17.10898"	"460.0"	"100.000"	"36.3438"	"9785"	"9785"	"9773"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"730.6"	""	"621.0"	""	"662.9"	""	"729.2"	""	"772.1"	"841.5"	""	"324"	"20"	"32.000"	"25.000"	"0.149112830624014"	"16"	"0.00447"	"0.04708"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAEAVAR"	"[K].yAEAVAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"504.78708"	"1008.56688"	"1008.56756"	"-0.67"	"-0.00034"	"5/48"	"5"	"48"	"31117747.5888672"	"HCD"	"MS2"	"1.837671"	"854.7"	"61.442"	"30.1961"	"7297"	"7297"	"7284"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1401.3"	""	"1302.3"	""	"1290.3"	""	"1190.8"	""	"1376.1"	"1528.3"	""	"324"	"28"	"32.000"	"25.000"	"0.0235784371054278"	"22"	"0.004606"	"0.04948"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAEAVAR"	"[K].yAEAVAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"504.78738"	"1008.56749"	"1008.56756"	"-0.07"	"-0.00003"	"4/48"	"4"	"48"	"5790687.24462891"	"HCD"	"MS2"	"0"	"353.3"	"100.000"	"30.4948"	"7406"	"7406"	"7386"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"506.8"	""	"501.7"	""	"499.9"	""	"514.0"	""	"672.3"	"661.7"	""	"285"	"22"	"31.000"	"24.000"	"0.0823786867553148"	"19"	"0.004867"	"0.05129"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAEAVAR"	"[K].yAEAVAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"504.78745"	"1008.56761"	"1008.56756"	"0.05"	"0.00003"	"9/48"	"9"	"48"	"20568628.3707275"	"HCD"	"MS2"	"3.285671"	"547.1"	"54.542"	"30.1756"	"7276"	"7276"	"7263"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"867.4"	""	"814.2"	""	"845.0"	""	"736.0"	""	"928.1"	"997.7"	""	"289"	"24"	"31.000"	"24.000"	"0.0544336989531748"	"22"	"0.004942"	"0.05299"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEAGYR"	"[R].lAEAGYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"504.78745"	"1008.56761"	"1008.56756"	"0.05"	"0.00003"	"6/48"	"6"	"48"	"10213184.4318848"	"HCD"	"MS2"	"20.29907"	"425.8"	"100.000"	"36.4828"	"9835"	"9835"	"9819"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"673.2"	""	"566.3"	""	"609.4"	""	"677.9"	""	"724.5"	"783.7"	""	"289"	"21"	"31.000"	"24.000"	"0.121581597967731"	"14"	"0.003653"	"0.03778"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYGGDDR"	"[K].vYGGDDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O35952"	"Hydroxyacylglutathione hydrolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hagh PE=1 SV=2"	"O35952"	"Hydroxyacylglutathione hydrolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hagh PE=1 SV=2"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"505.75873"	"1010.51018"	"1010.51044"	"-0.26"	"-0.00013"	"6/50"	"6"	"50"	"1927188.26721191"	"HCD"	"MS2"	"8.617264"	"149.9"	"100.000"	"25.5783"	"5409"	"5409"	"5393"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"211.4"	""	"184.6"	""	"204.5"	""	"252.4"	""	"282.7"	"288.1"	""	"269"	"21"	"31.000"	"24.000"	"0.114214773892384"	""	"0.008522"	"0.1055"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGNFGGSR"	"[K].sGNFGGSR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"505.76410"	"1010.52092"	"1010.52167"	"-0.74"	"-0.00038"	"7/78"	"7"	"78"	"26107154.4125977"	"HCD"	"MS2"	"6.372849"	"952.1"	"77.570"	"22.1700"	"4032"	"4032"	"4012"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1250.2"	""	"976.2"	""	"756.6"	""	"2163.2"	""	"2054.5"	"1849.6"	""	"310"	"30"	"31.000"	"24.000"	"0.0152170931168098"	"23"	"0.0006732"	"0.008808"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGNFGGSR"	"[K].sGNFGGSR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"505.76413"	"1010.52098"	"1010.52167"	"-0.68"	"-0.00035"	"7/78"	"7"	"78"	"21884086.5881348"	"HCD"	"MS2"	"17.29989"	"1056.0"	"100.000"	"22.1056"	"4023"	"4023"	"4003"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1369.7"	""	"1047.6"	""	"848.4"	""	"2495.0"	""	"2229.8"	"2052.3"	""	"310"	"30"	"31.000"	"24.000"	"0.0172318417728647"	""	"0.0006732"	"0.008667"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTSSFLV"	"[K].qTSSFLV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"505.78909"	"1010.57091"	"1010.57198"	"-1.06"	"-0.00053"	"6/52"	"6"	"52"	"953567.365783691"	"HCD"	"MS2"	"4.927414"	"15.0"	"100.000"	"80.6755"	"27754"	"27754"	"27735"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.3"	""	"16.9"	""	"14.2"	""	"33.5"	""	"33.2"	"28.8"	""	"234"	"41"	"30.000"	"23.000"	"0.000937963334163585"	"18"	"0.001211"	"0.01454"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTSSFLV"	"[K].qTSSFLV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"505.78922"	"1010.57115"	"1010.57198"	"-0.82"	"-0.00041"	"6/52"	"6"	"52"	"1003991.9085083"	"HCD"	"MS2"	"2.627804"	"16.9"	"100.000"	"80.6810"	"27757"	"27757"	"27739"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.4"	""	"18.6"	""	"16.1"	""	"36.4"	""	"39.2"	"40.5"	""	"234"	"41"	"30.000"	"23.000"	"0.000942292776202909"	"15"	"0.000936"	"0.01145"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVDYGK"	"[R].LSVDYGk.[K]"	"K7(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"505.78922"	"1010.57115"	"1010.57198"	"-0.82"	"-0.00041"	"5/52"	"5"	"52"	"4359653.13214111"	"HCD"	"MS2"	"25.8703"	"188.3"	"100.000"	"42.5049"	"12279"	"12279"	"12261"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"255.0"	""	"250.6"	""	"277.6"	""	"274.4"	""	"364.6"	"364.3"	""	"234"	"33"	"30.000"	"23.000"	"0.00540985795037135"	""	"0.00736"	"0.08473"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTSSFLV"	"[K].qTSSFLV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"505.78937"	"1010.57146"	"1010.57198"	"-0.51"	"-0.00026"	"6/52"	"6"	"52"	"414576.109069824"	"HCD"	"MS2"	"27.61187"	"14.1"	"100.000"	"80.9595"	"27869"	"27869"	"27854"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.0"	""	"17.7"	""	"13.9"	""	"32.4"	""	"21.1"	"29.1"	""	"234"	"31"	"30.000"	"23.000"	"0.00889581744020013"	"14"	"0.0023"	"0.02356"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAEVVAR"	"[R].hAEVVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"505.79987"	"1010.59245"	"1010.59444"	"-1.97"	"-0.00099"	"6/48"	"6"	"48"	"1167308.6975708"	"HCD"	"MS2"	"0"	"77.9"	"100.000"	"19.6040"	"3031"	"3031"	"3003"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.5"	""	"61.1"	""	"82.2"	""	"189.5"	"0.5"	"202.4"	"148.4"	""	"163"	"16"	"29.000"	"22.000"	"0.192378976004217"	"20"	"0.00447"	"0.04794"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTHAVVR"	"[K].tTHAVVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"506.80765"	"1012.60802"	"1012.61009"	"-2.05"	"-0.00104"	"7/50"	"7"	"50"	"1882871.22003174"	"HCD"	"MS2"	"0"	"88.7"	"100.000"	"19.1339"	"2843"	"2843"	"2821"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.0"	""	"69.6"	""	"82.2"	""	"97.0"	""	"117.5"	"377.2"	""	"192"	"29"	"29.000"	"22.000"	"0.0130698689516731"	""	"0.002973"	"0.02892"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTHAVVR"	"[K].tTHAVVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"506.80826"	"1012.60924"	"1012.61009"	"-0.84"	"-0.00043"	"7/50"	"7"	"50"	"2017078.8414917"	"HCD"	"MS2"	"4.644031"	"101.1"	"100.000"	"19.1803"	"2858"	"2858"	"2840"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"116.0"	""	"88.1"	""	"100.2"	""	"105.5"	""	"126.2"	"433.3"	""	"191"	"29"	"29.000"	"22.000"	"0.0127058396916908"	""	"0.0023"	"0.02412"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIELTAH"	"[K].tIELTAH.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47864"	"Aquaporin-5 OS=Rattus norvegicus OX=10116 GN=Aqp5 PE=2 SV=1"	"P47864"	"Aquaporin-5 OS=Rattus norvegicus OX=10116 GN=Aqp5 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"507.29425"	"1013.58122"	"1013.58288"	"-1.63"	"-0.00083"	"6/58"	"6"	"58"	"1597293.90484619"	"HCD"	"MS2"	"19.14059"	"47.1"	"100.000"	"48.0408"	"14539"	"14539"	"14518"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.2"	""	"61.6"	""	"58.2"	""	"85.6"	""	"84.6"	"103.9"	""	"197"	"40"	"29.000"	"22.000"	"0.00108003102320104"	""	"0.000936"	"0.01209"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIELTAH"	"[K].tIELTAH.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47864"	"Aquaporin-5 OS=Rattus norvegicus OX=10116 GN=Aqp5 PE=2 SV=1"	"P47864"	"Aquaporin-5 OS=Rattus norvegicus OX=10116 GN=Aqp5 PE=2 SV=1"	"0"	"2"	"2"	"0.7759"	"0.0000"	"1"	"1"	"1"	"507.29440"	"1013.58153"	"1013.58288"	"-1.33"	"-0.00067"	"6/58"	"6"	"58"	"17213195.0726929"	"HCD"	"MS2"	"16.67556"	"217.1"	"65.242"	"47.7174"	"14408"	"14408"	"14397"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"199.6"	""	"237.0"	""	"227.5"	""	"432.6"	""	"337.0"	"634.2"	""	"199"	"59"	"29.000"	"22.000"	"1.40547485689964E-05"	""	"0"	"0.001619"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIELTAH"	"[K].tIELTAH.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47864"	"Aquaporin-5 OS=Rattus norvegicus OX=10116 GN=Aqp5 PE=2 SV=1"	"P47864"	"Aquaporin-5 OS=Rattus norvegicus OX=10116 GN=Aqp5 PE=2 SV=1"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"507.29440"	"1013.58153"	"1013.58288"	"-1.33"	"-0.00067"	"5/58"	"5"	"58"	"12010383.9111328"	"HCD"	"MS2"	"19.48071"	"215.3"	"85.048"	"48.0572"	"14534"	"14534"	"14524"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"205.0"	""	"239.6"	""	"218.7"	""	"440.6"	""	"333.3"	"617.6"	""	"199"	"46"	"29.000"	"22.000"	"0.0002715332893894"	""	"0"	"0.003551"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVPALDR"	"[R].dVPALDR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"O55166"	"Vacuolar protein sorting-associated protein 52 homolog OS=Rattus norvegicus OX=10116 GN=Vps52 PE=1 SV=2"	"O55166"	"Vacuolar protein sorting-associated protein 52 homolog OS=Rattus norvegicus OX=10116 GN=Vps52 PE=1 SV=2"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"507.79214"	"1014.57701"	"1014.57813"	"-1.10"	"-0.00056"	"5/58"	"5"	"58"	"1193669.6350708"	"HCD"	"MS2"	"0"	"54.9"	"100.000"	"43.6098"	"12740"	"12740"	"12720"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.7"	""	"65.2"	""	"76.0"	""	"91.2"	"0.6"	"105.8"	"107.5"	""	"322"	"29"	"32.000"	"25.000"	"0.0207886303051779"	""	"0.007018"	"0.08128"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVPALDR"	"[R].dVPALDR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"O55166"	"Vacuolar protein sorting-associated protein 52 homolog OS=Rattus norvegicus OX=10116 GN=Vps52 PE=1 SV=2"	"O55166"	"Vacuolar protein sorting-associated protein 52 homolog OS=Rattus norvegicus OX=10116 GN=Vps52 PE=1 SV=2"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"507.79230"	"1014.57732"	"1014.57813"	"-0.80"	"-0.00040"	"5/58"	"5"	"58"	"1183347.29669189"	"HCD"	"MS2"	"0"	"59.2"	"100.000"	"43.7321"	"12780"	"12780"	"12762"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"85.2"	""	"66.9"	""	"81.4"	""	"104.0"	"1.1"	"114.7"	"108.2"	""	"322"	"23"	"32.000"	"25.000"	"0.0772370852305068"	"24"	"0.006739"	"0.07584"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPGLDLR"	"[K].dPGLDLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"507.79233"	"1014.57738"	"1014.57813"	"-0.74"	"-0.00037"	"6/56"	"6"	"56"	"7934441.12414551"	"HCD"	"MS2"	"3.467105"	"263.1"	"100.000"	"49.9226"	"15295"	"15295"	"15278"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"378.4"	""	"348.9"	""	"380.2"	""	"429.4"	""	"470.5"	"488.1"	""	"322"	"33"	"32.000"	"25.000"	"0.00897069055780406"	""	"0.002937"	"0.0276"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPGLDLR"	"[K].dPGLDLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.2174"	"0.0000"	"1"	"1"	"3"	"507.79236"	"1014.57744"	"1014.57813"	"-0.68"	"-0.00034"	"6/56"	"6"	"56"	"3718833.82806396"	"HCD"	"MS2"	"38.79311"	"135.0"	"100.000"	"49.3138"	"15058"	"15058"	"15036"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"187.8"	""	"180.5"	""	"196.7"	""	"235.0"	"0.3"	"232.2"	"245.3"	""	"322"	"23"	"32.000"	"25.000"	"0.0874633033702817"	""	"0.003717"	"0.03803"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPGLDLR"	"[K].dPGLDLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.4242"	"0.0000"	"1"	"1"	"1"	"507.79239"	"1014.57750"	"1014.57813"	"-0.62"	"-0.00031"	"6/56"	"6"	"56"	"7104928.11517334"	"HCD"	"MS2"	"3.847302"	"252.3"	"100.000"	"49.6040"	"15176"	"15176"	"15158"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"377.0"	""	"332.0"	""	"370.7"	""	"400.1"	""	"444.0"	"466.7"	""	"322"	"33"	"32.000"	"25.000"	"0.00775935954176454"	""	"0.001374"	"0.01794"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPGLDLR"	"[K].dPGLDLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"3"	"507.79254"	"1014.57781"	"1014.57813"	"-0.31"	"-0.00016"	"6/56"	"6"	"56"	"3028322.99206543"	"HCD"	"MS2"	"53.83853"	"109.8"	"100.000"	"49.6415"	"15180"	"15180"	"15153"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"170.2"	""	"135.1"	""	"158.1"	""	"198.3"	"0.7"	"183.1"	"193.0"	""	"322"	"23"	"32.000"	"25.000"	"0.0905369533556461"	""	"0.00263"	"0.0257"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGGGGYGR"	"[R].yGGGGYGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"508.26120"	"1015.51512"	"1015.51586"	"-0.73"	"-0.00037"	"6/58"	"6"	"58"	"11670224.0739136"	"HCD"	"MS2"	"45.13302"	"616.8"	"100.000"	"26.4339"	"5770"	"5770"	"5754"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"752.9"	""	"595.7"	""	"806.1"	""	"1190.9"	"7.2"	"1137.5"	"1363.6"	""	"191"	"26"	"29.000"	"22.000"	"0.0234965106196099"	"15"	"0"	"0.003648"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGGGGYGR"	"[R].yGGGGYGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"508.26151"	"1015.51573"	"1015.51586"	"-0.12"	"-0.00006"	"6/58"	"6"	"58"	"13405186.4752197"	"HCD"	"MS2"	"34.81076"	"654.6"	"100.000"	"26.5425"	"5798"	"5798"	"5778"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"812.7"	""	"664.4"	""	"822.1"	""	"1219.3"	"19.4"	"1192.8"	"1481.6"	""	"190"	"16"	"29.000"	"22.000"	"0.241392407027184"	"18"	"0.0003538"	"0.006733"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVSQPR"	"[R].aEVSQPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"508.28964"	"1015.57201"	"1015.57337"	"-1.35"	"-0.00068"	"6/56"	"6"	"56"	"4960630.24316406"	"HCD"	"MS2"	"10.04999"	"233.3"	"100.000"	"22.2568"	"4085"	"4085"	"4065"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"371.1"	""	"305.4"	""	"391.7"	""	"359.9"	""	"385.4"	"396.1"	""	"443"	"20"	"33.000"	"26.000"	"0.208628545629809"	"20"	"0.006769"	"0.07892"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVSQPR"	"[R].aEVSQPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"508.28992"	"1015.57256"	"1015.57337"	"-0.80"	"-0.00041"	"6/56"	"6"	"56"	"4435075.42144775"	"HCD"	"MS2"	"3.31967"	"208.1"	"100.000"	"22.3326"	"4099"	"4099"	"4072"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"343.0"	""	"276.5"	""	"324.2"	""	"293.4"	""	"354.3"	"382.1"	""	"440"	"21"	"33.000"	"26.000"	"0.17515505709181"	"21"	"0.005874"	"0.06637"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLDVQVR"	"[R].gLDVQVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P9Z6"	"Tumor-associated calcium signal transducer 2 OS=Rattus norvegicus OX=10116 GN=Tacstd2 PE=2 SV=1"	"Q6P9Z6"	"Tumor-associated calcium signal transducer 2 OS=Rattus norvegicus OX=10116 GN=Tacstd2 PE=2 SV=1"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"508.30814"	"1015.60900"	"1015.60976"	"-0.75"	"-0.00038"	"5/52"	"5"	"52"	"2863196.75494385"	"HCD"	"MS2"	"16.63746"	"137.0"	"100.000"	"45.1741"	"13371"	"13371"	"13351"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"156.4"	""	"178.9"	""	"170.9"	""	"236.8"	"1.4"	"287.1"	"269.3"	""	"411"	"19"	"33.000"	"26.000"	"0.274670378650294"	"24"	"0.004542"	"0.04923"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEALVAR"	"[K].qEALVAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"508.30823"	"1015.60918"	"1015.60976"	"-0.57"	"-0.00029"	"5/60"	"5"	"60"	"3444271.42901611"	"HCD"	"MS2"	"8.557088"	"169.3"	"100.000"	"30.3014"	"7339"	"7339"	"7322"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"203.7"	""	"198.0"	""	"216.7"	""	"256.6"	""	"326.6"	"407.1"	""	"411"	"30"	"33.000"	"26.000"	"0.0186987177525928"	"26"	"0.002973"	"0.02892"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEALVAR"	"[K].qEALVAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"508.30850"	"1015.60973"	"1015.60976"	"-0.03"	"-0.00002"	"5/60"	"5"	"60"	"3213458.43328857"	"HCD"	"MS2"	"7.244748"	"159.9"	"100.000"	"30.3522"	"7348"	"7348"	"7330"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"194.2"	""	"187.4"	""	"194.1"	""	"243.8"	""	"325.6"	"377.5"	""	"410"	"30"	"33.000"	"26.000"	"0.0185675183184131"	""	"0.003111"	"0.03122"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLDVQVR"	"[R].gLDVQVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P9Z6"	"Tumor-associated calcium signal transducer 2 OS=Rattus norvegicus OX=10116 GN=Tacstd2 PE=2 SV=1"	"Q6P9Z6"	"Tumor-associated calcium signal transducer 2 OS=Rattus norvegicus OX=10116 GN=Tacstd2 PE=2 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"508.30853"	"1015.60979"	"1015.60976"	"0.03"	"0.00001"	"10/52"	"10"	"52"	"2749459.38195801"	"HCD"	"MS2"	"12.02146"	"131.5"	"100.000"	"45.3329"	"13425"	"13425"	"13403"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"150.0"	""	"186.3"	""	"156.8"	""	"211.0"	"2.1"	"272.7"	"269.6"	""	"347"	"18"	"32.000"	"25.000"	"0.2613963259834"	"24"	"0.004069"	"0.04497"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPGGGSSR"	"[R].lGPGGGSSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BN86"	"Transmembrane protein 11, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tmem11 PE=2 SV=1"	"B0BN86"	"Transmembrane protein 11, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tmem11 PE=2 SV=1"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"508.78775"	"1016.56822"	"1016.56862"	"-0.39"	"-0.00020"	"7/66"	"7"	"66"	"1305026.14477539"	"HCD"	"MS2"	"23.32804"	"89.3"	"100.000"	"23.6566"	"4657"	"4657"	"4634"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"100.9"	""	"118.1"	""	"122.4"	""	"154.6"	"0.5"	"162.0"	"188.3"	""	"459"	"23"	"33.000"	"26.000"	"0.11851755674794"	""	"0.004942"	"0.05394"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVPEGMR"	"[K].vVPEGMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"508.79218"	"1016.57707"	"1016.57602"	"1.04"	"0.00053"	"8/48"	"8"	"48"	"12952863.3185425"	"HCD"	"MS2"	"25.69398"	"585.5"	"100.000"	"40.9261"	"11647"	"11647"	"11633"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1206.1"	""	"939.0"	""	"636.3"	""	"637.3"	""	"1040.2"	"1088.6"	""	"491"	"23"	"33.000"	"26.000"	"0.118864316241896"	"22"	"0.00413"	"0.04575"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEAGIER"	"[R].iEAGIER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P43425"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7 OS=Rattus norvegicus OX=10116 GN=Gng7 PE=2 SV=2"	"P43425"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7 OS=Rattus norvegicus OX=10116 GN=Gng7 PE=2 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"3"	"508.80023"	"1016.59319"	"1016.59378"	"-0.58"	"-0.00029"	"4/56"	"4"	"56"	"2429363.82250977"	"HCD"	"MS2"	"0"	"117.7"	"100.000"	"46.2373"	"13793"	"13793"	"13773"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"145.4"	""	"152.5"	""	"146.6"	""	"192.9"	"0.8"	"248.1"	"231.1"	""	"501"	"24"	"33.000"	"26.000"	"0.0961186649958159"	""	"0.009594"	"0.1263"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVNGLR"	"[K].dIVnGLR.[S]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.3143"	"0.0000"	"1"	"1"	"3"	"508.80060"	"1016.59392"	"1016.59378"	"0.14"	"0.00007"	"5/54"	"5"	"54"	"1350398.10961914"	"HCD"	"MS2"	"16.56848"	"70.8"	"100.000"	"57.8419"	"18518"	"18518"	"18498"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"99.1"	""	"81.7"	""	"91.4"	""	"121.2"	"1.8"	"141.6"	"134.6"	""	"436"	"35"	"33.000"	"26.000"	"0.00761125887743317"	""	"0.0023"	"0.02419"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIGDLGAR"	"[R].sIGDLGAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"509.29007"	"1017.57286"	"1017.58902"	"-15.88"	"-0.00808"	"7/62"	"7"	"62"	"3724195.16241455"	"HCD"	"MS2"	"35.14404"	"179.9"	"100.000"	"43.8993"	"12846"	"12846"	"12824"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"257.9"	""	"297.1"	""	"286.0"	""	"227.9"	""	"296.1"	"338.6"	""	"538"	"21"	"34.000"	"27.000"	"0.208810474373118"	"25"	"0.00859"	"0.1064"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGLLAGDR"	"[K].sGLLAGDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"509.29749"	"1017.58769"	"1017.58902"	"-1.31"	"-0.00067"	"7/68"	"7"	"68"	"3510492.09124756"	"HCD"	"MS2"	"9.850375"	"179.1"	"100.000"	"38.2935"	"10574"	"10574"	"10552"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"231.3"	""	"220.4"	""	"231.4"	""	"314.8"	""	"348.6"	"356.7"	""	"470"	"37"	"33.000"	"26.000"	"0.00476505439087501"	""	"0"	"0.003391"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTAQDVR"	"[K].vTAQDVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"509.29758"	"1017.58788"	"1017.58902"	"-1.13"	"-0.00057"	"6/60"	"6"	"60"	"16196071.0366211"	"HCD"	"MS2"	"2.25186"	"615.0"	"100.000"	"27.1612"	"6066"	"6066"	"6055"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"804.8"	""	"690.7"	""	"718.2"	""	"1051.1"	""	"1249.3"	"1335.0"	""	"470"	"30"	"33.000"	"26.000"	"0.0233382271378919"	""	"0.004022"	"0.04257"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLLADGR"	"[K].gSLLADGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"509.29764"	"1017.58800"	"1017.58902"	"-1.01"	"-0.00051"	"5/64"	"5"	"64"	"3755467.57958984"	"HCD"	"MS2"	"19.00261"	"184.7"	"100.000"	"39.2896"	"10980"	"10980"	"10962"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"226.6"	""	"217.2"	""	"202.1"	""	"338.5"	"4.3"	"398.5"	"367.9"	""	"470"	"21"	"33.000"	"26.000"	"0.182838589494354"	"25"	"0.0003538"	"0.006469"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLLADGR"	"[K].gSLLADGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"509.29770"	"1017.58812"	"1017.58902"	"-0.89"	"-0.00045"	"5/64"	"5"	"64"	"3598354.26763916"	"HCD"	"MS2"	"22.07819"	"185.6"	"100.000"	"39.4674"	"11043"	"11043"	"11025"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"213.5"	""	"240.2"	""	"186.3"	""	"334.4"	"0.7"	"407.0"	"382.4"	""	"470"	"21"	"33.000"	"26.000"	"0.177446673501377"	"21"	"0.0004639"	"0.00802"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTAQDVR"	"[K].vTAQDVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"509.29770"	"1017.58812"	"1017.58902"	"-0.89"	"-0.00045"	"5/60"	"5"	"60"	"20505434.6027222"	"HCD"	"MS2"	"0"	"808.4"	"100.000"	"27.2350"	"6080"	"6080"	"6063"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1044.1"	""	"917.9"	""	"957.5"	""	"1361.1"	""	"1654.7"	"1751.0"	""	"470"	"28"	"33.000"	"26.000"	"0.0363134793291527"	""	"0.004022"	"0.04344"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSAQEVR"	"[K].vSAQEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"509.29779"	"1017.58830"	"1017.58902"	"-0.71"	"-0.00036"	"6/60"	"6"	"60"	"7819033.73205566"	"HCD"	"MS2"	"19.60254"	"353.0"	"100.000"	"25.9459"	"5558"	"5558"	"5545"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"477.3"	""	"423.6"	""	"479.4"	""	"605.3"	"7.1"	"643.7"	"709.7"	""	"464"	"25"	"33.000"	"26.000"	"0.0775332492860585"	""	"0.008437"	"0.1016"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSAQEVR"	"[K].vSAQEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"509.29782"	"1017.58837"	"1017.58902"	"-0.65"	"-0.00033"	"5/60"	"5"	"60"	"9873756.58282471"	"HCD"	"MS2"	"20.09127"	"412.0"	"100.000"	"25.8836"	"5548"	"5548"	"5528"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"549.6"	""	"510.8"	""	"525.1"	""	"740.9"	"3.6"	"774.1"	"802.7"	""	"464"	"24"	"33.000"	"26.000"	"0.0973840842859138"	"26"	"0.008522"	"0.1056"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGLLAGDR"	"[K].sGLLAGDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"509.29791"	"1017.58855"	"1017.58902"	"-0.47"	"-0.00024"	"7/68"	"7"	"68"	"3310989.85772705"	"HCD"	"MS2"	"7.763671"	"171.0"	"100.000"	"38.4648"	"10635"	"10635"	"10622"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"235.8"	""	"199.2"	""	"227.3"	""	"297.3"	"0.3"	"340.4"	"321.4"	""	"464"	"36"	"33.000"	"26.000"	"0.00573440001643742"	""	"0"	"0.002477"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLLADGR"	"[K].gSLLADGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"509.29803"	"1017.58879"	"1017.58902"	"-0.23"	"-0.00012"	"5/64"	"5"	"64"	"26907081.3282471"	"HCD"	"MS2"	"20.15741"	"577.6"	"47.298"	"39.1523"	"10916"	"10916"	"10899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"788.1"	""	"788.2"	""	"632.4"	""	"1033.0"	""	"1168.6"	"1078.8"	""	"475"	"34"	"33.000"	"26.000"	"0.00965302906767382"	""	"0.0002479"	"0.006067"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLLADGR"	"[K].gSLLADGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"509.29831"	"1017.58934"	"1017.58902"	"0.31"	"0.00016"	"5/64"	"5"	"64"	"29223061.7661133"	"HCD"	"MS2"	"19.62339"	"537.5"	"40.050"	"38.9560"	"10845"	"10845"	"10828"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"763.6"	""	"763.6"	""	"559.2"	""	"986.1"	""	"1062.7"	"969.3"	""	"421"	"34"	"33.000"	"26.000"	"0.00836088211633172"	""	"0.0002479"	"0.006007"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIGDLGAR"	"[R].sIGDLGAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"509.29944"	"1017.59160"	"1017.58902"	"2.53"	"0.00129"	"7/62"	"7"	"62"	"4628047.78765869"	"HCD"	"MS2"	"31.94583"	"213.7"	"100.000"	"43.8069"	"12819"	"12819"	"12800"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"325.0"	""	"349.8"	""	"334.3"	""	"271.1"	""	"352.9"	"388.4"	""	"428"	"27"	"33.000"	"26.000"	"0.0395743484461309"	"24"	"0.001886"	"0.02112"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATSNLLK"	"[M].aTSNLLk.[N]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"5"	"509.31006"	"1017.61284"	"1017.61418"	"-1.31"	"-0.00067"	"4/56"	"4"	"56"	"2178663.32720947"	"HCD"	"MS2"	"27.24799"	"75.9"	"100.000"	"66.4212"	"21984"	"21984"	"21965"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"111.2"	""	"108.5"	""	"113.0"	""	"111.4"	"0.0"	"134.8"	"139.6"	""	"496"	"25"	"33.000"	"26.000"	"0.0703803919053506"	"25"	"0.004938"	"0.05262"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATSNLLK"	"[M].aTSNLLk.[N]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"5"	"509.31012"	"1017.61296"	"1017.61418"	"-1.19"	"-0.00061"	"4/56"	"4"	"56"	"2389152.24804688"	"HCD"	"MS2"	"25.57127"	"79.4"	"100.000"	"66.4712"	"21990"	"21990"	"21973"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"117.4"	""	"110.1"	""	"120.5"	""	"119.5"	""	"141.8"	"147.7"	""	"496"	"23"	"33.000"	"26.000"	"0.113097155155921"	"24"	"0.007602"	"0.08988"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDEALR"	"[R].sVDEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.2121"	"0.0000"	"1"	"1"	"1"	"509.78946"	"1018.57164"	"1018.57304"	"-1.37"	"-0.00070"	"9/54"	"9"	"54"	"60917028.675293"	"HCD"	"MS2"	"12.23638"	"621.0"	"22.965"	"35.9493"	"9626"	"9626"	"9609"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1050.2"	""	"735.2"	""	"896.4"	""	"1103.0"	"15.1"	"1062.0"	"1011.2"	""	"614"	"33"	"34.000"	"27.000"	"0.0169878483529231"	""	"0.004022"	"0.04285"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDEALR"	"[R].sVDEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.2121"	"0.0000"	"1"	"1"	"1"	"509.78989"	"1018.57250"	"1018.57304"	"-0.53"	"-0.00027"	"9/54"	"9"	"54"	"43070088.4677734"	"HCD"	"MS2"	"1.431879"	"332.7"	"18.366"	"36.2499"	"9748"	"9748"	"9731"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"541.6"	""	"395.0"	""	"520.7"	""	"573.6"	""	"572.3"	"548.2"	""	"601"	"33"	"34.000"	"27.000"	"0.0157341931194018"	""	"0.004942"	"0.05325"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDEALR"	"[R].sVDEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.1875"	"0.0000"	"1"	"1"	"1"	"509.79004"	"1018.57280"	"1018.57304"	"-0.23"	"-0.00012"	"9/54"	"9"	"54"	"35498584.5005493"	"HCD"	"MS2"	"12.55346"	"1254.3"	"71.075"	"36.0701"	"9670"	"9670"	"9658"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2054.3"	""	"1541.5"	""	"1810.0"	""	"2184.5"	"38.6"	"2146.2"	"2091.1"	""	"610"	"32"	"34.000"	"27.000"	"0.0178772140176779"	""	"0.003111"	"0.03106"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SVDEALR"	"[R].sVDEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"3"	"3"	"3"	"509.79019"	"1018.57311"	"1018.57304"	"0.07"	"0.00003"	"6/54"	"6"	"54"	"5040057.26525879"	"HCD"	"MS2"	"29.14727"	"229.6"	"100.000"	"36.6367"	"9898"	"9898"	"9880"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"366.9"	""	"276.5"	""	"318.9"	""	"408.7"	"10.2"	"389.8"	"401.6"	""	"557"	"20"	"34.000"	"27.000"	"0.277859467774581"	"20"	"0.00379"	"0.03903"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDEALR"	"[R].sVDEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"509.79044"	"1018.57359"	"1018.57304"	"0.54"	"0.00028"	"9/54"	"9"	"54"	"70030877.0209961"	"HCD"	"MS2"	"0.6279725"	"457.8"	"15.745"	"36.3384"	"9777"	"9777"	"9766"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"747.3"	""	"585.4"	""	"681.1"	""	"786.0"	""	"789.7"	"742.4"	""	"550"	"33"	"34.000"	"27.000"	"0.0144654748257444"	""	"0.003717"	"0.03879"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGSAAQTR"	"[R].vGSAAQTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"509.79547"	"1018.58367"	"1018.58427"	"-0.60"	"-0.00030"	"6/68"	"6"	"68"	"34955321.2674561"	"HCD"	"MS2"	"4.524909"	"1134.3"	"74.211"	"21.1354"	"3630"	"3630"	"3611"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1438.4"	""	"1562.8"	""	"1628.1"	""	"1863.1"	""	"2075.2"	"2184.9"	""	"542"	"35"	"34.000"	"27.000"	"0.00825979542189184"	"25"	"0.0004639"	"0.007787"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGSAAQTR"	"[R].vGSAAQTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"509.79550"	"1018.58373"	"1018.58427"	"-0.54"	"-0.00027"	"6/68"	"6"	"68"	"40134646.9727783"	"HCD"	"MS2"	"2.642648"	"1027.8"	"60.622"	"21.2210"	"3647"	"3647"	"3627"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1303.2"	""	"1402.1"	""	"1442.3"	""	"1714.0"	""	"1909.9"	"1985.5"	""	"542"	"35"	"34.000"	"27.000"	"0.00829792090530173"	"25"	"0.0002479"	"0.005965"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IENSITI"	"[R].iENSITI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LQ70"	"Arachidonate 12-lipoxygenase, 12S-type OS=Rattus norvegicus OX=10116 GN=Alox12 PE=1 SV=1"	"F1LQ70"	"Arachidonate 12-lipoxygenase, 12S-type OS=Rattus norvegicus OX=10116 GN=Alox12 PE=1 SV=1"	"0"	"2"	"2"	"0.7885"	"0.0000"	"1"	"1"	"1"	"509.80179"	"1018.59630"	"1018.59819"	"-1.86"	"-0.00095"	"6/56"	"6"	"56"	"345656.014648438"	"HCD"	"MS2"	"11.32058"	"10.8"	"100.000"	"90.9016"	"31771"	"31771"	"31754"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.4"	""	"15.8"	""	"15.7"	""	"19.0"	""	"17.5"	"20.7"	""	"523"	"52"	"34.000"	"27.000"	"0.000169617904372864"	"27"	"0.001374"	"0.01596"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IENSITI"	"[R].iENSITI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LQ70"	"Arachidonate 12-lipoxygenase, 12S-type OS=Rattus norvegicus OX=10116 GN=Alox12 PE=1 SV=1"	"F1LQ70"	"Arachidonate 12-lipoxygenase, 12S-type OS=Rattus norvegicus OX=10116 GN=Alox12 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"509.80231"	"1018.59734"	"1018.59819"	"-0.84"	"-0.00043"	"4/56"	"4"	"56"	"477257.343139648"	"HCD"	"MS2"	"8.908404"	"12.2"	"100.000"	"90.5944"	"31645"	"31645"	"31631"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.7"	""	"21.9"	""	"21.1"	""	"16.8"	""	"19.5"	"19.6"	""	"545"	"26"	"34.000"	"27.000"	"0.0665834825609107"	"21"	"0.009081"	"0.1171"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IENSITI"	"[R].iENSITI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LQ70"	"Arachidonate 12-lipoxygenase, 12S-type OS=Rattus norvegicus OX=10116 GN=Alox12 PE=1 SV=1"	"F1LQ70"	"Arachidonate 12-lipoxygenase, 12S-type OS=Rattus norvegicus OX=10116 GN=Alox12 PE=1 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"509.80234"	"1018.59740"	"1018.59819"	"-0.78"	"-0.00040"	"6/56"	"6"	"56"	"448535.122558594"	"HCD"	"MS2"	"0"	"11.9"	"100.000"	"90.6047"	"31653"	"31653"	"31633"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.0"	""	"17.1"	""	"16.1"	""	"19.5"	""	"20.1"	"23.3"	""	"545"	"34"	"34.000"	"27.000"	"0.0116510886476307"	"26"	"0.003717"	"0.03845"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMAAVQR"	"[K].dMAAVQR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P37805; P31232"	"Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2; Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"510.27820"	"1019.54912"	"1019.55053"	"-1.38"	"-0.00071"	"5/50"	"5"	"50"	"14327316.2605591"	"HCD"	"MS2"	"17.26007"	"684.0"	"100.000"	"28.6029"	"6637"	"6637"	"6617"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1233.1"	""	"920.8"	""	"920.9"	""	"857.4"	""	"1339.2"	"1214.2"	""	"532"	"31"	"34.000"	"27.000"	"0.0211778387211007"	"23"	"0.004022"	"0.04338"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMAAVQR"	"[K].dMAAVQR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P37805; P31232"	"Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2; Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.4839"	"0.0000"	"1"	"1"	"1"	"510.27829"	"1019.54930"	"1019.55053"	"-1.20"	"-0.00061"	"5/50"	"5"	"50"	"13994772.769043"	"HCD"	"MS2"	"8.102808"	"455.4"	"65.134"	"28.8179"	"6737"	"6737"	"6719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"787.2"	""	"596.2"	""	"638.5"	""	"555.2"	""	"906.6"	"834.1"	""	"532"	"31"	"34.000"	"27.000"	"0.0210320515047954"	""	"0.003581"	"0.03717"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMAAVQR"	"[K].dMAAVQR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P37805; P31232"	"Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2; Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"510.27866"	"1019.55004"	"1019.55053"	"-0.49"	"-0.00025"	"5/50"	"5"	"50"	"11903353.7902832"	"HCD"	"MS2"	"31.60847"	"613.0"	"100.000"	"28.5221"	"6618"	"6618"	"6598"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1101.0"	""	"824.1"	""	"838.2"	""	"781.9"	""	"1190.5"	"1076.7"	""	"532"	"24"	"34.000"	"27.000"	"0.115846158400361"	"22"	"0.004942"	"0.05464"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMAAVQR"	"[K].dMAAVQR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P37805; P31232"	"Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2; Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.4516"	"0.0000"	"1"	"1"	"1"	"510.27869"	"1019.55010"	"1019.55053"	"-0.43"	"-0.00022"	"5/50"	"5"	"50"	"11702357.3787842"	"HCD"	"MS2"	"11.12313"	"416.5"	"71.083"	"28.8898"	"6753"	"6753"	"6737"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"727.6"	""	"532.6"	""	"556.7"	""	"534.8"	""	"821.5"	"773.8"	""	"532"	"31"	"34.000"	"27.000"	"0.021621291729965"	""	"0.002973"	"0.0303"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGSQLER"	"[K].tGSQLER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"510.28705"	"1019.56682"	"1019.56829"	"-1.44"	"-0.00073"	"6/64"	"6"	"64"	"11800667.9229736"	"HCD"	"MS2"	"15.33573"	"598.2"	"100.000"	"22.2800"	"4094"	"4094"	"4074"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"615.1"	""	"532.5"	""	"495.4"	""	"1560.7"	""	"1153.4"	"1330.1"	""	"525"	"26"	"34.000"	"27.000"	"0.0670084091948577"	"26"	"0.004942"	"0.05317"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGSQLER"	"[K].tGSQLER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"510.28745"	"1019.56761"	"1019.56829"	"-0.66"	"-0.00034"	"6/64"	"6"	"64"	"15342911.9265747"	"HCD"	"MS2"	"4.024158"	"731.7"	"100.000"	"22.3509"	"4106"	"4106"	"4088"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"734.2"	""	"612.8"	""	"556.2"	""	"1944.9"	""	"1428.3"	"1687.9"	""	"522"	"28"	"34.000"	"27.000"	"0.0455659581912251"	"27"	"0.004867"	"0.0518"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPAHPVR"	"[R].nPAHPVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"510.30063"	"1019.59398"	"1019.59478"	"-0.78"	"-0.00040"	"6/62"	"6"	"62"	"1149053.79150391"	"HCD"	"MS2"	"40.8825"	"74.0"	"100.000"	"18.9731"	"2777"	"2777"	"2760"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"106.0"	""	"94.6"	""	"99.2"	""	"112.9"	"0.0"	"137.6"	"151.5"	""	"499"	"13"	"33.000"	"26.000"	"1.15630006474204"	"13"	"0.00736"	"0.08604"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPAHPVR"	"[R].nPAHPVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"510.30106"	"1019.59484"	"1019.59478"	"0.06"	"0.00003"	"6/62"	"6"	"62"	"905869.305603027"	"HCD"	"MS2"	"45.75787"	"65.0"	"100.000"	"19.0357"	"2799"	"2799"	"2777"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.9"	""	"75.6"	""	"94.9"	""	"95.5"	""	"132.0"	"136.0"	""	"490"	"15"	"33.000"	"26.000"	"0.796463878594314"	"17"	"0.008437"	"0.1015"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSLSDR"	"[K].lTSLSDR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"510.79739"	"1020.58751"	"1020.58869"	"-1.16"	"-0.00059"	"6/56"	"6"	"56"	"5111113.98864746"	"HCD"	"MS2"	"13.15012"	"243.6"	"100.000"	"43.1811"	"12566"	"12566"	"12546"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"451.1"	""	"369.0"	""	"283.2"	""	"391.9"	""	"415.9"	"394.3"	""	"492"	"34"	"33.000"	"26.000"	"0.0103737339843431"	""	"0.002973"	"0.02865"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSLSDR"	"[K].lTSLSDR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"510.79764"	"1020.58800"	"1020.58869"	"-0.68"	"-0.00035"	"6/56"	"6"	"56"	"4893592.92578125"	"HCD"	"MS2"	"12.60501"	"237.1"	"100.000"	"43.3057"	"12606"	"12606"	"12588"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"436.1"	""	"357.6"	""	"256.6"	""	"387.2"	"0.7"	"430.4"	"374.4"	""	"479"	"33"	"33.000"	"26.000"	"0.013283285825342"	""	"0.002871"	"0.02677"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STVSLER"	"[K].sTVSLER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"510.79785"	"1020.58843"	"1020.58869"	"-0.26"	"-0.00013"	"6/58"	"6"	"58"	"4581650.84606934"	"HCD"	"MS2"	"31.43421"	"324.1"	"100.000"	"31.6157"	"7861"	"7861"	"7837"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"405.1"	""	"356.6"	""	"382.2"	""	"581.8"	""	"700.5"	"657.6"	""	"499"	"13"	"33.000"	"26.000"	"1.35853411884184"	"20"	"0.008522"	"0.1063"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPDGNR"	"[R].fSPDGNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"511.26611"	"1021.52495"	"1021.52642"	"-1.44"	"-0.00074"	"4/54"	"4"	"54"	"5921822.95227051"	"HCD"	"MS2"	"43.98813"	"326.4"	"100.000"	"29.7689"	"7123"	"7123"	"7100"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"482.8"	""	"411.9"	""	"398.5"	""	"546.0"	""	"628.5"	"628.8"	""	"398"	"21"	"32.000"	"25.000"	"0.164381551965859"	"16"	"0.007602"	"0.08963"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPDGNR"	"[R].fSPDGNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"511.26636"	"1021.52544"	"1021.52642"	"-0.97"	"-0.00049"	"4/54"	"4"	"54"	"15047105.7801514"	"HCD"	"MS2"	"2.171288"	"458.3"	"62.192"	"30.0722"	"7247"	"7247"	"7231"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"708.3"	""	"558.3"	""	"594.4"	""	"744.0"	""	"863.2"	"883.6"	""	"394"	"19"	"32.000"	"25.000"	"0.277629893289109"	"18"	"0.006443"	"0.07302"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPDGNR"	"[R].fSPDGNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"511.26654"	"1021.52580"	"1021.52642"	"-0.61"	"-0.00031"	"4/54"	"4"	"54"	"4882462.34564209"	"HCD"	"MS2"	"46.27759"	"289.3"	"100.000"	"29.7900"	"7120"	"7120"	"7091"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"435.5"	""	"351.5"	""	"354.4"	""	"484.9"	""	"582.1"	"535.3"	""	"399"	"21"	"32.000"	"26.000"	"0.173357605642617"	"18"	"0.007018"	"0.08191"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPDGNR"	"[R].fSPDGNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"511.26663"	"1021.52599"	"1021.52642"	"-0.43"	"-0.00022"	"4/54"	"4"	"54"	"17620999.7055054"	"HCD"	"MS2"	"2.142557"	"619.8"	"75.871"	"30.0726"	"7235"	"7235"	"7224"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"937.4"	""	"777.4"	""	"813.6"	""	"990.3"	""	"1189.1"	"1176.9"	""	"399"	"19"	"32.000"	"26.000"	"0.280506481063918"	"19"	"0.005874"	"0.06647"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSNSLTR"	"[K].dSNSLTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"511.27695"	"1021.54662"	"1021.54755"	"-0.92"	"-0.00047"	"5/66"	"5"	"66"	"9285294.01751709"	"HCD"	"MS2"	"10.65695"	"526.2"	"100.000"	"22.4724"	"4172"	"4172"	"4154"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"667.6"	""	"557.8"	""	"496.1"	""	"1090.3"	"2.0"	"1186.0"	"1001.0"	""	"442"	"26"	"33.000"	"26.000"	"0.0531364178801532"	""	"0.004431"	"0.04637"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSNSLTR"	"[K].dSNSLTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"511.27719"	"1021.54711"	"1021.54755"	"-0.44"	"-0.00022"	"6/66"	"6"	"66"	"8419084.74499512"	"HCD"	"MS2"	"8.265795"	"497.8"	"100.000"	"22.5253"	"4177"	"4177"	"4158"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"618.7"	""	"545.9"	""	"478.5"	""	"1048.9"	""	"1103.5"	"936.5"	""	"441"	"25"	"33.000"	"26.000"	"0.0755802969334923"	""	"0.004069"	"0.04499"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVDAFR"	"[R].nAVDAFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"511.28473"	"1021.56218"	"1021.56281"	"-0.62"	"-0.00031"	"5/60"	"5"	"60"	"2013432.32769775"	"HCD"	"MS2"	"0"	"110.8"	"100.000"	"41.4675"	"11866"	"11866"	"11844"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"140.2"	""	"117.1"	""	"145.7"	""	"186.1"	""	"224.6"	"240.5"	""	"391"	"25"	"32.000"	"25.000"	"0.0629718948695911"	"15"	"0.003507"	"0.0366"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVDAFR"	"[R].nAVDAFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"511.28519"	"1021.56310"	"1021.56281"	"0.28"	"0.00014"	"9/60"	"9"	"60"	"4287436.27868652"	"HCD"	"MS2"	"0"	"211.1"	"100.000"	"41.5370"	"11884"	"11884"	"11874"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"264.9"	""	"261.4"	""	"272.9"	""	"351.0"	""	"407.1"	"448.9"	""	"359"	"39"	"32.000"	"25.000"	"0.00250071646128682"	"17"	"0.001546"	"0.01871"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVDAFR"	"[R].nAVDAFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"511.28534"	"1021.56340"	"1021.56281"	"0.58"	"0.00030"	"9/60"	"9"	"60"	"8819006.93115234"	"HCD"	"MS2"	"6.449995"	"379.7"	"100.000"	"41.1531"	"11739"	"11739"	"11722"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"519.2"	""	"464.7"	""	"460.9"	""	"648.4"	""	"735.2"	"777.2"	""	"359"	"35"	"32.000"	"25.000"	"0.00618108125720192"	"15"	"0.001374"	"0.01754"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVDAFR"	"[R].nAVDAFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"511.28610"	"1021.56493"	"1021.56281"	"2.07"	"0.00106"	"5/60"	"5"	"60"	"6803549.07946777"	"HCD"	"MS2"	"10.17944"	"314.8"	"100.000"	"41.2708"	"11776"	"11776"	"11763"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"437.2"	""	"381.1"	""	"380.2"	""	"543.0"	"4.4"	"617.5"	"623.3"	""	"381"	"32"	"32.000"	"25.000"	"0.0110890662985351"	"16"	"0.002937"	"0.02766"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISASSATR"	"[R].iSASSATR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"511.29526"	"1021.58324"	"1021.58394"	"-0.69"	"-0.00035"	"6/66"	"6"	"66"	"5368155.52105713"	"HCD"	"MS2"	"16.01014"	"297.0"	"100.000"	"24.6281"	"5040"	"5040"	"5029"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"326.3"	""	"345.5"	""	"350.9"	""	"600.4"	""	"619.0"	"585.7"	""	"321"	"33"	"32.000"	"25.000"	"0.00742121539345814"	"24"	"0"	"0.003536"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVSVSSTR"	"[R].gVSVSSTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"511.29532"	"1021.58336"	"1021.58394"	"-0.57"	"-0.00029"	"7/64"	"7"	"64"	"9640686.10150146"	"HCD"	"MS2"	"0"	"411.8"	"100.000"	"24.2126"	"4876"	"4876"	"4857"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"340.7"	""	"444.2"	""	"447.1"	""	"1073.6"	""	"820.9"	"787.4"	""	"321"	"42"	"32.000"	"25.000"	"0.00101268653789071"	"20"	"0"	"0.002254"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVSVSSTR"	"[R].gVSVSSTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"511.29532"	"1021.58336"	"1021.58394"	"-0.57"	"-0.00029"	"7/64"	"7"	"64"	"8943157.7600708"	"HCD"	"MS2"	"0"	"387.4"	"100.000"	"24.3057"	"4899"	"4899"	"4885"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"333.9"	""	"413.4"	""	"398.6"	""	"1003.6"	""	"793.5"	"740.1"	""	"321"	"37"	"32.000"	"25.000"	"0.00321717760392109"	"21"	"0.0001301"	"0.004118"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISASSATR"	"[R].iSASSATR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"511.29547"	"1021.58367"	"1021.58394"	"-0.27"	"-0.00014"	"6/66"	"6"	"66"	"5025920.8548584"	"HCD"	"MS2"	"14.52848"	"263.5"	"100.000"	"24.7063"	"5056"	"5056"	"5044"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"277.2"	""	"315.1"	""	"317.2"	""	"525.0"	""	"584.5"	"489.5"	""	"337"	"35"	"32.000"	"25.000"	"0.00513570305752316"	"19"	"0.0001301"	"0.004006"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSSGAK"	"[R].gGSSGAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"511.30542"	"1021.60356"	"1021.60423"	"-0.65"	"-0.00033"	"6/50"	"6"	"50"	"1516313.69641113"	"HCD"	"MS2"	"0"	"150.9"	"100.000"	"19.8602"	"3120"	"3120"	"3115"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"218.7"	""	"225.0"	""	"202.9"	""	"253.1"	""	"277.5"	"255.7"	""	"210"	"28"	"30.000"	"23.000"	"0.0150379729423722"	""	"0.002056"	"0.0222"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSSGAK"	"[R].gGSSGAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"0"	"2"	"2"	"0.3704"	"0.0000"	"1"	"1"	"1"	"511.30545"	"1021.60362"	"1021.60423"	"-0.59"	"-0.00030"	"9/50"	"9"	"50"	"7227803.09686279"	"HCD"	"MS2"	"0"	"604.5"	"100.000"	"19.8613"	"3124"	"3124"	"3119"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"904.8"	""	"1030.9"	""	"961.9"	""	"931.3"	""	"991.3"	"902.7"	""	"210"	"27"	"30.000"	"23.000"	"0.0231307278620613"	""	"0.002973"	"0.02924"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQAPPVR"	"[K].qQAPPVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"512.80817"	"1024.60906"	"1024.61009"	"-1.01"	"-0.00052"	"6/62"	"6"	"62"	"7418138.18292236"	"HCD"	"MS2"	"2.32318"	"304.4"	"100.000"	"22.2454"	"4080"	"4080"	"4065"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"349.2"	""	"291.9"	""	"317.3"	""	"679.4"	"0.2"	"670.6"	"584.0"	""	"168"	"26"	"29.000"	"22.000"	"0.0201038523538053"	""	"0.002795"	"0.02638"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQAPPVR"	"[K].qQAPPVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"512.80835"	"1024.60942"	"1024.61009"	"-0.66"	"-0.00034"	"6/62"	"6"	"62"	"7690659.67108154"	"HCD"	"MS2"	"4.042684"	"315.8"	"100.000"	"22.2891"	"4081"	"4081"	"4056"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"365.6"	""	"306.2"	""	"322.8"	""	"735.1"	""	"675.7"	"601.4"	""	"168"	"30"	"29.000"	"22.000"	"0.00759065557926733"	""	"0.001546"	"0.01949"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAPPER"	"[K].iIAPPER.[K]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.2105"	"0.0000"	"1"	"1"	"1"	"512.82092"	"1024.63457"	"1024.63525"	"-0.66"	"-0.00034"	"8/48"	"8"	"48"	"8326574.55883789"	"HCD"	"MS2"	"0"	"269.5"	"100.000"	"47.1077"	"14159"	"14159"	"14142"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"339.4"	""	"347.2"	""	"348.2"	""	"412.0"	""	"525.9"	"588.8"	""	"106"	"19"	"27.000"	"20.000"	"0.072322906239213"	""	"0.007602"	"0.09021"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAPPER"	"[K].iIAPPER.[K]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"512.82117"	"1024.63506"	"1024.63525"	"-0.18"	"-0.00009"	"6/48"	"6"	"48"	"9487534.05413818"	"HCD"	"MS2"	"13.63179"	"342.4"	"100.000"	"46.3889"	"13855"	"13855"	"13836"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"447.1"	""	"442.1"	""	"491.3"	""	"515.6"	""	"656.6"	"700.7"	""	"106"	"20"	"27.000"	"20.000"	"0.0567905231775931"	""	"0.006308"	"0.07148"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAPPER"	"[K].iIAPPER.[K]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"512.82117"	"1024.63506"	"1024.63525"	"-0.18"	"-0.00009"	"8/48"	"8"	"48"	"8471281.52459717"	"HCD"	"MS2"	"0"	"278.9"	"100.000"	"47.3003"	"14226"	"14226"	"14209"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"343.4"	""	"348.7"	""	"357.3"	""	"437.9"	""	"553.8"	"609.6"	""	"106"	"18"	"27.000"	"20.000"	"0.083999339200439"	""	"0.006769"	"0.07815"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IIAPPER"	"[K].iIAPPER.[K]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"512.82135"	"1024.63542"	"1024.63525"	"0.17"	"0.00009"	"7/48"	"7"	"48"	"127360550.250977"	"HCD"	"MS2"	"0"	"361.7"	"7.876"	"46.7946"	"14031"	"14031"	"14014"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"428.7"	""	"432.2"	""	"472.7"	""	"532.2"	""	"722.1"	"853.1"	""	"93"	"22"	"26.000"	"19.000"	"0.0283434657216679"	""	"0.00736"	"0.08587"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IIAPPER"	"[K].iIAPPER.[K]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"512.82135"	"1024.63542"	"1024.63525"	"0.17"	"0.00009"	"7/48"	"7"	"48"	"567955575.560547"	"HCD"	"MS2"	"0"	"582.2"	"2.938"	"46.4920"	"13909"	"13909"	"13902"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"738.4"	""	"771.9"	""	"769.4"	""	"883.2"	""	"1109.0"	"1261.1"	""	"93"	"20"	"26.000"	"19.000"	"0.0493688434097407"	""	"0.008837"	"0.1151"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IIAPPER"	"[K].iIAPPER.[K]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0500"	"2"	"2"	"2"	"512.82172"	"1024.63616"	"1024.63525"	"0.89"	"0.00045"	"6/48"	"6"	"48"	"127623956.867676"	"HCD"	"MS2"	"0.03135211"	"397.5"	"9.218"	"46.9874"	"14098"	"14098"	"14083"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"479.6"	""	"507.0"	""	"540.6"	""	"589.5"	""	"776.0"	"887.9"	""	"92"	"19"	"26.000"	"19.000"	"0.0526935953064946"	""	"0.00912"	"0.1189"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAPPER"	"[K].iIAPPER.[K]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.0909"	"0.0000"	"1"	"1"	"1"	"512.82208"	"1024.63689"	"1024.63525"	"1.60"	"0.00082"	"6/48"	"6"	"48"	"411133345.558594"	"HCD"	"MS2"	"0.0322038"	"586.4"	"3.883"	"46.6825"	"13975"	"13975"	"13965"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"756.8"	""	"803.9"	""	"812.3"	""	"866.6"	""	"1079.2"	"1249.3"	""	"92"	"22"	"26.000"	"19.000"	"0.0293601203647652"	""	"0.008668"	"0.1081"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSSAGFDR"	"[R].gSSAGFDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"513.26361"	"1025.51995"	"1025.52134"	"-1.36"	"-0.00070"	"7/66"	"7"	"66"	"14804763.0546265"	"HCD"	"MS2"	"5.911057"	"683.0"	"100.000"	"24.0126"	"4801"	"4801"	"4783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1025.2"	""	"888.3"	""	"998.0"	""	"1064.4"	""	"1257.3"	"1242.3"	""	"265"	"42"	"31.000"	"24.000"	"0.000861421839704595"	""	"0"	"0.001685"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSSAGFDR"	"[R].gSSAGFDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"2"	"2"	"0.6512"	"0.0000"	"1"	"1"	"1"	"513.26392"	"1025.52056"	"1025.52134"	"-0.76"	"-0.00039"	"7/66"	"7"	"66"	"14908521.4932251"	"HCD"	"MS2"	"0"	"732.6"	"100.000"	"24.0828"	"4807"	"4807"	"4789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1082.1"	""	"983.5"	""	"1020.8"	""	"1129.6"	""	"1364.6"	"1369.7"	""	"265"	"43"	"31.000"	"24.000"	"0.000656471502816347"	""	"0"	"0.00206"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGSGFK"	"[-].mLGSGFk.[A]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"0"	"2"	"2"	"0.9783"	"0.0000"	"1"	"1"	"1"	"513.77740"	"1026.54753"	"1026.54913"	"-1.56"	"-0.00080"	"6/48"	"6"	"48"	"912646.767028809"	"HCD"	"MS2"	"17.84974"	"42.4"	"100.000"	"68.4758"	"22821"	"22821"	"22799"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"51.4"	""	"62.2"	""	"61.4"	""	"92.4"	""	"62.0"	"74.9"	""	"255"	"46"	"31.000"	"24.000"	"0.000288078060703175"	"16"	"0.000936"	"0.01341"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGSGFK"	"[-].mLGSGFk.[A]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"513.77771"	"1026.54814"	"1026.54913"	"-0.97"	"-0.00050"	"6/48"	"6"	"48"	"1011383.41674805"	"HCD"	"MS2"	"9.96538"	"49.8"	"100.000"	"68.7850"	"22947"	"22947"	"22927"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.6"	""	"69.5"	""	"71.3"	""	"107.4"	""	"78.2"	"85.8"	""	"255"	"46"	"31.000"	"24.000"	"0.000296831635352289"	"16"	"0.001374"	"0.01686"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGSGFK"	"[-].mLGSGFk.[A]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"0"	"2"	"2"	"0.9783"	"0.0000"	"1"	"1"	"1"	"513.77795"	"1026.54863"	"1026.54913"	"-0.49"	"-0.00025"	"6/48"	"6"	"48"	"901096.476074219"	"HCD"	"MS2"	"12.6483"	"42.6"	"100.000"	"68.6387"	"22873"	"22873"	"22853"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.4"	""	"58.6"	""	"61.2"	""	"88.4"	""	"70.4"	"72.9"	""	"277"	"46"	"31.000"	"24.000"	"0.000316555434267497"	"16"	"0.001211"	"0.01548"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGSGFK"	"[-].mLGSGFk.[A]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"513.77802"	"1026.54875"	"1026.54913"	"-0.37"	"-0.00019"	"6/48"	"6"	"48"	"1124159.2545166"	"HCD"	"MS2"	"7.517914"	"52.5"	"100.000"	"68.9500"	"23000"	"23000"	"22981"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.2"	""	"60.9"	""	"77.1"	""	"108.5"	"0.8"	"99.7"	"87.4"	""	"277"	"46"	"31.000"	"24.000"	"0.000318749691711078"	"16"	"0.001812"	"0.02026"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTTVYR"	"[K].tGTTVYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"513.79211"	"1026.57695"	"1026.57813"	"-1.14"	"-0.00059"	"6/54"	"6"	"54"	"10388159.3504639"	"HCD"	"MS2"	"18.5487"	"462.2"	"100.000"	"25.1784"	"5261"	"5261"	"5238"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"623.7"	""	"592.4"	""	"552.0"	""	"774.2"	"1.1"	"884.1"	"957.3"	""	"234"	"19"	"30.000"	"23.000"	"0.13557695067015"	"18"	"0.00447"	"0.04779"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTTVYR"	"[K].tGTTVYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"513.79224"	"1026.57720"	"1026.57813"	"-0.91"	"-0.00046"	"6/54"	"6"	"54"	"3027059.7713623"	"HCD"	"MS2"	"7.71445"	"153.8"	"100.000"	"25.4633"	"5377"	"5377"	"5360"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"192.5"	""	"207.7"	""	"194.8"	""	"237.6"	""	"310.2"	"318.7"	""	"234"	"14"	"30.000"	"23.000"	"0.500248576797356"	"14"	"0.006254"	"0.07095"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTTVYR"	"[K].tGTTVYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"513.79230"	"1026.57732"	"1026.57813"	"-0.79"	"-0.00040"	"6/54"	"6"	"54"	"3560955.90338135"	"HCD"	"MS2"	"3.968669"	"178.0"	"100.000"	"25.5071"	"5380"	"5380"	"5365"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"238.1"	""	"241.1"	""	"204.8"	""	"280.4"	""	"345.4"	"381.1"	""	"234"	"21"	"30.000"	"23.000"	"0.0916612682036469"	"18"	"0.003581"	"0.03708"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGDPALIR"	"[K].gGDPALIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P799"	"Serine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Sars PE=1 SV=3"	"Q6P799"	"Serine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Sars PE=1 SV=3"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"514.30786"	"1027.60845"	"1027.60976"	"-1.28"	"-0.00066"	"7/56"	"7"	"56"	"3865016.34484863"	"HCD"	"MS2"	"0"	"164.4"	"100.000"	"38.2567"	"10559"	"10559"	"10536"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"230.2"	""	"206.6"	""	"222.4"	""	"273.3"	""	"305.0"	"323.9"	""	"216"	"30"	"30.000"	"23.000"	"0.00987242300787871"	""	"0"	"0.003695"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQGLPR"	"[R].dIQGLPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"514.30792"	"1027.60857"	"1027.60976"	"-1.16"	"-0.00060"	"5/56"	"5"	"56"	"5236429.37780762"	"HCD"	"MS2"	"3.636886"	"212.2"	"100.000"	"47.8482"	"14461"	"14461"	"14448"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"298.9"	""	"298.2"	""	"280.6"	""	"325.6"	""	"390.4"	"422.0"	""	"216"	"32"	"30.000"	"23.000"	"0.00721811430974104"	"23"	"0.001812"	"0.02061"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQGLPR"	"[R].dIQGLPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"514.30792"	"1027.60857"	"1027.60976"	"-1.16"	"-0.00060"	"5/56"	"5"	"56"	"9105953.37939453"	"HCD"	"MS2"	"6.581489"	"327.5"	"100.000"	"47.5053"	"14309"	"14309"	"14289"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"452.6"	""	"469.5"	""	"442.0"	""	"519.7"	""	"608.3"	"616.0"	""	"216"	"32"	"30.000"	"23.000"	"0.0069091362232126"	"22"	"0.002467"	"0.02493"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGDPALIR"	"[K].gGDPALIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P799"	"Serine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Sars PE=1 SV=3"	"Q6P799"	"Serine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Sars PE=1 SV=3"	"0"	"2"	"2"	"0.1935"	"0.0000"	"1"	"1"	"1"	"514.30804"	"1027.60881"	"1027.60976"	"-0.92"	"-0.00047"	"7/56"	"7"	"56"	"3902706.48388672"	"HCD"	"MS2"	"11.48037"	"162.3"	"100.000"	"38.4438"	"10627"	"10627"	"10606"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"241.3"	""	"191.2"	""	"225.7"	""	"266.6"	""	"300.8"	"315.9"	""	"216"	"31"	"30.000"	"23.000"	"0.00793274977609685"	""	"0"	"0.001557"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQGLPR"	"[R].dIQGLPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"514.30817"	"1027.60906"	"1027.60976"	"-0.68"	"-0.00035"	"5/56"	"5"	"56"	"9710357.4072876"	"HCD"	"MS2"	"1.207559"	"365.0"	"100.000"	"48.0616"	"14535"	"14535"	"14524"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"491.0"	""	"487.6"	""	"487.6"	""	"558.7"	""	"709.8"	"735.1"	""	"216"	"32"	"30.000"	"23.000"	"0.00694102734702381"	"22"	"0.001546"	"0.01943"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQGLPR"	"[R].dIQGLPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"514.30817"	"1027.60906"	"1027.60976"	"-0.68"	"-0.00035"	"5/56"	"5"	"56"	"14243984.5375366"	"HCD"	"MS2"	"4.842183"	"541.8"	"100.000"	"47.2685"	"14224"	"14224"	"14206"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"776.5"	""	"760.8"	""	"686.3"	""	"906.4"	""	"998.8"	"1014.1"	""	"216"	"32"	"30.000"	"23.000"	"0.00672084307982692"	"22"	"0.002937"	"0.02813"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQGLPR"	"[R].dIQGLPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"514.30835"	"1027.60942"	"1027.60976"	"-0.33"	"-0.00017"	"5/56"	"5"	"56"	"68025647.6716309"	"HCD"	"MS2"	"0.318531"	"468.2"	"18.075"	"47.5748"	"14350"	"14350"	"14333"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"646.2"	""	"613.8"	""	"636.7"	""	"746.8"	""	"873.9"	"927.8"	""	"213"	"32"	"30.000"	"23.000"	"0.00659704744956772"	"23"	"0.004069"	"0.04498"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGDPALIR"	"[K].gGDPALIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P799"	"Serine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Sars PE=1 SV=3"	"Q6P799"	"Serine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Sars PE=1 SV=3"	"0"	"2"	"2"	"0.0588"	"0.0000"	"1"	"1"	"1"	"514.30847"	"1027.60967"	"1027.60976"	"-0.09"	"-0.00005"	"11/56"	"11"	"56"	"3116142.50653076"	"HCD"	"MS2"	"12.00729"	"135.4"	"100.000"	"38.7383"	"10746"	"10746"	"10725"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"197.7"	""	"167.5"	""	"184.3"	""	"220.4"	""	"234.8"	"279.7"	""	"213"	"17"	"30.000"	"23.000"	"0.232996612950627"	"17"	"0.002871"	"0.02685"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQGLPR"	"[R].dIQGLPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"514.30859"	"1027.60991"	"1027.60976"	"0.15"	"0.00008"	"5/56"	"5"	"56"	"75325393.6914063"	"HCD"	"MS2"	"0.2668825"	"431.5"	"15.457"	"47.7927"	"14427"	"14427"	"14410"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"609.2"	""	"591.1"	""	"551.6"	""	"690.6"	""	"816.3"	"840.0"	""	"213"	"32"	"30.000"	"23.000"	"0.00656673676982478"	"22"	"0.002937"	"0.02769"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLENGR"	"[R].lPLEnGR.[F]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"514.79962"	"1028.59197"	"1028.59378"	"-1.76"	"-0.00090"	"5/52"	"5"	"52"	"1647898.20324707"	"HCD"	"MS2"	"10.82311"	"64.3"	"100.000"	"53.0065"	"16552"	"16552"	"16533"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"94.3"	""	"80.9"	""	"83.0"	""	"102.5"	"0.4"	"120.0"	"128.1"	""	"328"	"22"	"32.000"	"25.000"	"0.112679224162334"	"19"	"0.002056"	"0.02263"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLENGR"	"[R].lPLEnGR.[F]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"514.79980"	"1028.59233"	"1028.59378"	"-1.40"	"-0.00072"	"5/52"	"5"	"52"	"1778899.51513672"	"HCD"	"MS2"	"6.046103"	"64.4"	"100.000"	"52.7388"	"16454"	"16454"	"16434"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"94.6"	""	"74.9"	""	"85.4"	""	"101.3"	""	"125.3"	"130.1"	""	"328"	"27"	"32.000"	"25.000"	"0.0358792906327727"	"18"	"0.0023"	"0.02354"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAVVGEGR"	"[R].iAVVGEGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"515.31555"	"1029.62383"	"1029.62541"	"-1.54"	"-0.00079"	"6/56"	"6"	"56"	"7734191.2911377"	"HCD"	"MS2"	"29.09733"	"294.3"	"100.000"	"43.1560"	"12545"	"12545"	"12524"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"512.9"	""	"456.0"	""	"428.0"	""	"418.9"	""	"486.8"	"481.3"	""	"375"	"35"	"32.000"	"25.000"	"0.00561049619364035"	"24"	"0.0008629"	"0.01117"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAVVGEGR"	"[R].iAVVGEGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"515.31567"	"1029.62407"	"1029.62541"	"-1.30"	"-0.00067"	"6/56"	"6"	"56"	"6591793.18438721"	"HCD"	"MS2"	"33.74393"	"248.2"	"100.000"	"43.0223"	"12501"	"12501"	"12483"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"423.4"	""	"389.6"	""	"358.2"	""	"347.6"	""	"419.3"	"411.0"	""	"375"	"33"	"32.000"	"25.000"	"0.00879025091522372"	""	"0.0006732"	"0.009248"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAVVGEGR"	"[R].iAVVGEGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"515.31610"	"1029.62493"	"1029.62541"	"-0.47"	"-0.00024"	"6/56"	"6"	"56"	"10126820.2372437"	"HCD"	"MS2"	"0"	"385.4"	"100.000"	"43.3255"	"12625"	"12625"	"12607"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"629.3"	""	"591.9"	""	"600.2"	""	"498.1"	""	"672.4"	"656.0"	""	"367"	"35"	"32.000"	"25.000"	"0.00518365475397032"	""	"0.0001301"	"0.004549"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAVVGEGR"	"[R].iAVVGEGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"515.31635"	"1029.62541"	"1029.62541"	"0.00"	"0.00000"	"6/56"	"6"	"56"	"8726815.67059326"	"HCD"	"MS2"	"0.817073"	"345.0"	"100.000"	"43.4526"	"12667"	"12667"	"12650"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"548.2"	""	"523.3"	""	"525.7"	""	"473.9"	""	"590.2"	"606.8"	""	"369"	"35"	"32.000"	"25.000"	"0.00527225455252678"	""	"0.0001301"	"0.004362"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDGLLR"	"[K].eVDGLLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q498R3"	"DnaJ homolog subfamily C member 10 OS=Rattus norvegicus OX=10116 GN=Dnajc10 PE=2 SV=2"	"Q498R3"	"DnaJ homolog subfamily C member 10 OS=Rattus norvegicus OX=10116 GN=Dnajc10 PE=2 SV=2"	"0"	"2"	"2"	"0.2059"	"0.0000"	"1"	"1"	"1"	"515.80798"	"1030.60869"	"1030.60943"	"-0.71"	"-0.00037"	"6/52"	"6"	"52"	"4380053.21130371"	"HCD"	"MS2"	"11.70873"	"178.7"	"100.000"	"48.2360"	"14606"	"14606"	"14590"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"298.1"	""	"227.8"	""	"252.9"	""	"263.7"	"1.7"	"291.8"	"355.2"	""	"507"	"34"	"34.000"	"27.000"	"0.010714649371633"	""	"0.004867"	"0.05185"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAALEER"	"[R].lAALEER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNI5"	"Olfactomedin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Olfml3 PE=2 SV=2"	"B0BNI5"	"Olfactomedin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Olfml3 PE=2 SV=2"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"3"	"515.80811"	"1030.60893"	"1030.60943"	"-0.48"	"-0.00025"	"5/50"	"5"	"50"	"1976873.86993408"	"HCD"	"MS2"	"23.90309"	"88.0"	"100.000"	"53.2069"	"16634"	"16634"	"16611"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"108.2"	""	"101.8"	""	"99.1"	""	"161.0"	""	"184.1"	"182.1"	""	"497"	"28"	"33.000"	"26.000"	"0.0397490170110745"	"24"	"0.00413"	"0.04576"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDGLLR"	"[K].eVDGLLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q498R3"	"DnaJ homolog subfamily C member 10 OS=Rattus norvegicus OX=10116 GN=Dnajc10 PE=2 SV=2"	"Q498R3"	"DnaJ homolog subfamily C member 10 OS=Rattus norvegicus OX=10116 GN=Dnajc10 PE=2 SV=2"	"0"	"2"	"2"	"0.1034"	"0.0000"	"1"	"1"	"1"	"515.80817"	"1030.60906"	"1030.60943"	"-0.36"	"-0.00018"	"9/52"	"9"	"52"	"4945137.48944092"	"HCD"	"MS2"	"7.922323"	"208.3"	"100.000"	"47.9558"	"14504"	"14504"	"14488"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"330.9"	""	"263.9"	""	"286.5"	""	"322.3"	"9.3"	"326.8"	"431.8"	""	"497"	"29"	"33.000"	"26.000"	"0.0280108567859614"	""	"0.006958"	"0.0808"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAALEER"	"[R].lAALEER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNI5"	"Olfactomedin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Olfml3 PE=2 SV=2"	"B0BNI5"	"Olfactomedin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Olfml3 PE=2 SV=2"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"3"	"515.80841"	"1030.60954"	"1030.60943"	"0.12"	"0.00006"	"5/50"	"5"	"50"	"2042471.06286621"	"HCD"	"MS2"	"25.33309"	"94.0"	"100.000"	"52.9392"	"16536"	"16536"	"16513"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"106.4"	""	"106.9"	""	"110.9"	""	"180.4"	""	"191.0"	"197.7"	""	"497"	"26"	"33.000"	"26.000"	"0.0667308094746139"	"19"	"0.005001"	"0.05688"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLNILGR"	"[].dLnILGR.[]"	"N-Term(TMT6plex); N3(Deamidated)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0476"	"2"	"2"	"2"	"515.80884"	"1030.61040"	"1030.60943"	"0.94"	"0.00049"	"6/56"	"6"	"56"	"1434227.71484375"	"HCD"	"MS2"	"20.18439"	"62.2"	"100.000"	"75.2383"	"25554"	"25554"	"25534"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.2"	""	"87.4"	""	"71.9"	""	"108.8"	""	"125.0"	"118.3"	""	"409"	"20"	"33.000"	"26.000"	"0.188231937423524"	""	"0.007627"	"0.09328"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLESALR"	"[K].nLESALR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.0769"	"0.0000"	"1"	"1"	"1"	"516.30536"	"1031.60344"	"1031.60467"	"-1.20"	"-0.00062"	"5/62"	"5"	"62"	"5716337.12750244"	"HCD"	"MS2"	"25.95092"	"235.0"	"100.000"	"45.8549"	"13649"	"13649"	"13627"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"297.3"	""	"290.6"	""	"320.2"	""	"416.6"	"0.5"	"461.3"	"442.7"	""	"556"	"26"	"34.000"	"27.000"	"0.0673046074992657"	""	"0.006769"	"0.07795"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIANTR"	"[R].iDIANTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O70377"	"Synaptosomal-associated protein 23 OS=Rattus norvegicus OX=10116 GN=Snap23 PE=1 SV=1"	"O70377"	"Synaptosomal-associated protein 23 OS=Rattus norvegicus OX=10116 GN=Snap23 PE=1 SV=1"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"516.30554"	"1031.60381"	"1031.60467"	"-0.84"	"-0.00043"	"6/60"	"6"	"60"	"1576881.71447754"	"HCD"	"MS2"	"34.57802"	"88.5"	"100.000"	"44.6138"	"13132"	"13132"	"13107"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"116.8"	""	"101.0"	""	"122.3"	""	"163.3"	"2.5"	"178.6"	"154.7"	""	"556"	"15"	"34.000"	"27.000"	"0.799916759296515"	"24"	"0.006129"	"0.06989"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTADQLR"	"[R].vTADQLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P42893"	"Endothelin-converting enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ece1 PE=1 SV=2"	"P42893"	"Endothelin-converting enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ece1 PE=1 SV=2"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"516.30560"	"1031.60393"	"1031.60467"	"-0.72"	"-0.00037"	"6/56"	"6"	"56"	"4549139.06500244"	"HCD"	"MS2"	"9.558505"	"232.1"	"100.000"	"35.8438"	"9582"	"9582"	"9562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"236.7"	""	"234.0"	""	"221.5"	""	"417.7"	"14.1"	"516.6"	"569.7"	""	"556"	"25"	"34.000"	"27.000"	"0.0829936368059192"	""	"0.008901"	"0.1156"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVLEAQR"	"[R].sVLEAQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A2RUW1"	"Toll-interacting protein OS=Rattus norvegicus OX=10116 GN=Tollip PE=1 SV=1"	"A2RUW1"	"Toll-interacting protein OS=Rattus norvegicus OX=10116 GN=Tollip PE=1 SV=1"	"0"	"2"	"2"	"0.1739"	"0.0000"	"1"	"1"	"1"	"516.30566"	"1031.60405"	"1031.60467"	"-0.60"	"-0.00031"	"5/56"	"5"	"56"	"4228452.35516357"	"HCD"	"MS2"	"15.91918"	"213.2"	"100.000"	"31.1510"	"7671"	"7671"	"7647"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"274.1"	""	"228.2"	""	"256.7"	""	"411.8"	"2.0"	"431.8"	"419.6"	""	"556"	"23"	"34.000"	"27.000"	"0.136158511784428"	""	"0.005183"	"0.05883"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVLEAQR"	"[R].sVLEAQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A2RUW1"	"Toll-interacting protein OS=Rattus norvegicus OX=10116 GN=Tollip PE=1 SV=1"	"A2RUW1"	"Toll-interacting protein OS=Rattus norvegicus OX=10116 GN=Tollip PE=1 SV=1"	"0"	"2"	"2"	"0.1739"	"0.0000"	"1"	"1"	"1"	"516.30573"	"1031.60417"	"1031.60467"	"-0.49"	"-0.00025"	"5/56"	"5"	"56"	"4363992.49542236"	"HCD"	"MS2"	"12.3735"	"209.7"	"100.000"	"31.1093"	"7664"	"7664"	"7645"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"272.4"	""	"224.5"	""	"231.3"	""	"428.9"	"6.7"	"415.7"	"410.4"	""	"554"	"23"	"34.000"	"27.000"	"0.13227560880318"	""	"0.005119"	"0.05822"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSEGQR"	"[R].lLSEGQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPB1"	"Dipeptidyl peptidase 2 OS=Rattus norvegicus OX=10116 GN=Dpp7 PE=1 SV=1"	"Q9EPB1"	"Dipeptidyl peptidase 2 OS=Rattus norvegicus OX=10116 GN=Dpp7 PE=1 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"516.30573"	"1031.60417"	"1031.60467"	"-0.49"	"-0.00025"	"5/52"	"5"	"52"	"5252671.15545654"	"HCD"	"MS2"	"6.603344"	"238.8"	"100.000"	"36.5218"	"9851"	"9851"	"9832"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"379.1"	""	"325.7"	""	"383.3"	""	"374.3"	"10.3"	"381.5"	"403.7"	""	"554"	"25"	"34.000"	"27.000"	"0.0927854266467183"	"25"	"0.00736"	"0.08542"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLESALR"	"[K].nLESALR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.0769"	"0.0000"	"1"	"1"	"1"	"516.30573"	"1031.60417"	"1031.60467"	"-0.49"	"-0.00025"	"10/62"	"10"	"62"	"5398177.40881348"	"HCD"	"MS2"	"23.97453"	"227.6"	"100.000"	"45.9999"	"13696"	"13696"	"13677"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"278.5"	""	"266.7"	""	"311.6"	""	"404.6"	"2.8"	"439.5"	"456.0"	""	"554"	"26"	"34.000"	"27.000"	"0.0759416045624024"	""	"0.005001"	"0.05653"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSEGQR"	"[R].lLSEGQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPB1"	"Dipeptidyl peptidase 2 OS=Rattus norvegicus OX=10116 GN=Dpp7 PE=1 SV=1"	"Q9EPB1"	"Dipeptidyl peptidase 2 OS=Rattus norvegicus OX=10116 GN=Dpp7 PE=1 SV=1"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"516.30579"	"1031.60430"	"1031.60467"	"-0.37"	"-0.00019"	"5/52"	"5"	"52"	"4942004.77191162"	"HCD"	"MS2"	"8.0967"	"234.9"	"100.000"	"36.3461"	"9786"	"9786"	"9773"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"371.4"	""	"327.9"	""	"364.9"	""	"362.5"	"6.2"	"386.5"	"402.3"	""	"554"	"26"	"34.000"	"27.000"	"0.0691002739363199"	"25"	"0.007413"	"0.08824"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDNVSIR"	"[K].vDNVSIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI55"	"Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Rattus norvegicus OX=10116 GN=Ngly1 PE=2 SV=2"	"Q5XI55"	"Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Rattus norvegicus OX=10116 GN=Ngly1 PE=2 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"516.30585"	"1031.60442"	"1031.60467"	"-0.25"	"-0.00013"	"6/62"	"6"	"62"	"2340140.68304443"	"HCD"	"MS2"	"38.37487"	"115.2"	"100.000"	"40.3744"	"11423"	"11423"	"11398"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"161.4"	""	"145.6"	""	"149.4"	""	"183.9"	"3.5"	"228.2"	"220.9"	""	"554"	"15"	"34.000"	"27.000"	"0.817484955786589"	"23"	"0.008668"	"0.1101"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGQTIER"	"[R].vGQTIER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"516.30585"	"1031.60442"	"1031.60467"	"-0.25"	"-0.00013"	"6/60"	"6"	"60"	"7961292.1619873"	"HCD"	"MS2"	"7.96309"	"411.3"	"100.000"	"29.1106"	"6844"	"6844"	"6827"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"567.2"	""	"498.7"	""	"442.9"	""	"784.4"	"28.9"	"832.6"	"747.5"	""	"554"	"18"	"34.000"	"27.000"	"0.447177320240937"	""	"0.006739"	"0.07566"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTADQLR"	"[R].vTADQLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P42893"	"Endothelin-converting enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ece1 PE=1 SV=2"	"P42893"	"Endothelin-converting enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ece1 PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"516.30591"	"1031.60454"	"1031.60467"	"-0.13"	"-0.00007"	"6/56"	"6"	"56"	"4136484.69689941"	"HCD"	"MS2"	"10.24705"	"201.8"	"100.000"	"35.9094"	"9604"	"9604"	"9588"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"215.3"	""	"211.7"	""	"202.3"	""	"368.4"	"2.0"	"435.2"	"485.3"	""	"554"	"24"	"34.000"	"27.000"	"0.102678559933774"	"24"	"0.008668"	"0.1078"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGILQSR"	"[R].eGILQSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"0"	"2"	"2"	"0.3793"	"0.0000"	"1"	"1"	"1"	"516.30603"	"1031.60478"	"1031.60467"	"0.11"	"0.00005"	"5/62"	"5"	"62"	"7168013.74938965"	"HCD"	"MS2"	"16.33589"	"363.0"	"100.000"	"37.3937"	"10211"	"10211"	"10199"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"546.8"	""	"428.6"	""	"433.8"	""	"622.0"	""	"718.8"	"693.6"	""	"554"	"29"	"34.000"	"27.000"	"0.0365998890669682"	""	"0.004942"	"0.05281"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGQTIER"	"[R].vGQTIER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"516.30609"	"1031.60491"	"1031.60467"	"0.22"	"0.00012"	"6/60"	"6"	"60"	"8119725.57501221"	"HCD"	"MS2"	"5.757389"	"394.8"	"100.000"	"29.0617"	"6836"	"6836"	"6816"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"580.2"	""	"454.2"	""	"427.7"	""	"750.2"	"21.2"	"782.7"	"728.3"	""	"554"	"20"	"34.000"	"27.000"	"0.273199417519846"	"26"	"0.005921"	"0.06877"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGILQSR"	"[R].eGILQSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"0"	"2"	"2"	"0.4138"	"0.0000"	"1"	"1"	"1"	"516.30621"	"1031.60515"	"1031.60467"	"0.46"	"0.00024"	"5/62"	"5"	"62"	"7130133.74591064"	"HCD"	"MS2"	"23.20259"	"367.3"	"100.000"	"37.5945"	"10286"	"10286"	"10275"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"547.8"	""	"442.7"	""	"463.8"	""	"604.1"	""	"709.6"	"719.6"	""	"519"	"29"	"34.000"	"27.000"	"0.0365710443190476"	""	"0.003922"	"0.04075"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSLEADR"	"[R].lSLEADR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q924K2"	"FAS-associated factor 1 OS=Rattus norvegicus OX=10116 GN=Faf1 PE=1 SV=1"	"Q924K2"	"FAS-associated factor 1 OS=Rattus norvegicus OX=10116 GN=Faf1 PE=1 SV=1"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"516.79675"	"1032.58623"	"1032.58869"	"-2.38"	"-0.00123"	"6/56"	"6"	"56"	"2523322.73175049"	"HCD"	"MS2"	"16.6865"	"131.3"	"100.000"	"46.8014"	"14033"	"14033"	"14014"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"196.2"	""	"172.4"	""	"183.1"	""	"206.1"	"1.1"	"245.7"	"238.7"	""	"589"	"32"	"34.000"	"27.000"	"0.0197281017473167"	""	"0.003449"	"0.03266"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSLEADR"	"[R].lSLEADR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q924K2"	"FAS-associated factor 1 OS=Rattus norvegicus OX=10116 GN=Faf1 PE=1 SV=1"	"Q924K2"	"FAS-associated factor 1 OS=Rattus norvegicus OX=10116 GN=Faf1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"516.79718"	"1032.58708"	"1032.58869"	"-1.56"	"-0.00080"	"6/56"	"6"	"56"	"2344577.86151123"	"HCD"	"MS2"	"7.334773"	"118.3"	"100.000"	"47.0011"	"14103"	"14103"	"14083"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"180.7"	""	"163.3"	""	"164.3"	""	"179.2"	""	"216.0"	"218.4"	""	"608"	"28"	"34.000"	"27.000"	"0.045172443525525"	""	"0.004431"	"0.04633"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASNAGSIA"	"[R].iASNAGSIA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"516.79761"	"1032.58794"	"1032.58869"	"-0.73"	"-0.00038"	"7/72"	"7"	"72"	"4113926.63134766"	"HCD"	"MS2"	"2.845646"	"55.7"	"100.000"	"54.4768"	"17162"	"17162"	"17145"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.9"	"9.3"	"79.1"	""	"90.0"	""	"80.1"	""	"100.5"	"92.8"	""	"608"	"55"	"34.000"	"27.000"	"0.000107615191689364"	""	"0"	"0.003506"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASNAGSIA"	"[R].iASNAGSIA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"516.79761"	"1032.58794"	"1032.58869"	"-0.73"	"-0.00038"	"7/72"	"7"	"72"	"4718641.95080566"	"HCD"	"MS2"	"9.933004"	"71.0"	"100.000"	"54.4162"	"17124"	"17124"	"17104"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"111.1"	"9.9"	"110.8"	""	"113.8"	""	"99.9"	""	"110.2"	"120.5"	""	"608"	"54"	"34.000"	"27.000"	"0.000113207078701389"	""	"0.0002479"	"0.00576"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASNAGSIA"	"[R].iASNAGSIA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"0"	"2"	"2"	"0.6481"	"0.0000"	"1"	"1"	"1"	"516.79767"	"1032.58806"	"1032.58869"	"-0.61"	"-0.00031"	"7/72"	"7"	"72"	"4151450.73168945"	"HCD"	"MS2"	"2.273597"	"63.6"	"100.000"	"54.7266"	"17250"	"17250"	"17232"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.1"	"11.3"	"94.6"	""	"112.1"	""	"88.8"	""	"100.7"	"107.2"	""	"608"	"54"	"34.000"	"27.000"	"0.000109868598242442"	""	"0"	"0.001929"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSDLAR"	"[K].eLSDLAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P61078"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1"	"P61078"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1"	"0"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"516.79767"	"1032.58806"	"1032.58869"	"-0.61"	"-0.00031"	"5/54"	"5"	"54"	"9249876.01483154"	"HCD"	"MS2"	"1.490477"	"378.2"	"100.000"	"48.1766"	"14595"	"14595"	"14578"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"595.3"	""	"487.2"	""	"506.7"	""	"633.5"	""	"669.7"	"690.5"	""	"608"	"37"	"34.000"	"27.000"	"0.00663549893200273"	""	"0.004676"	"0.05035"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASNAGSIA"	"[R].iASNAGSIA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"0"	"2"	"2"	"0.6481"	"0.0000"	"1"	"1"	"1"	"516.79773"	"1032.58818"	"1032.58869"	"-0.49"	"-0.00025"	"7/72"	"7"	"72"	"4306301.56835938"	"HCD"	"MS2"	"5.113762"	"71.1"	"100.000"	"54.1634"	"17036"	"17036"	"17017"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"120.0"	"8.7"	"93.6"	""	"108.7"	""	"107.8"	"0.9"	"113.9"	"119.1"	""	"612"	"54"	"34.000"	"27.000"	"0.000120426323089468"	""	"0.0003538"	"0.007321"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSDLAR"	"[K].eLSDLAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P61078"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1"	"P61078"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"1"	"516.79773"	"1032.58818"	"1032.58869"	"-0.49"	"-0.00025"	"5/54"	"5"	"54"	"9143875.41217041"	"HCD"	"MS2"	"4.027295"	"392.7"	"100.000"	"48.4725"	"14703"	"14703"	"14686"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"575.8"	""	"500.9"	""	"524.5"	""	"678.6"	""	"692.1"	"754.3"	""	"612"	"37"	"34.000"	"27.000"	"0.00685048668401912"	""	"0.005829"	"0.065"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LSDAELR"	"[K].lSDAELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"5"	"516.79779"	"1032.58830"	"1032.58869"	"-0.37"	"-0.00019"	"6/54"	"6"	"54"	"5601240.24456787"	"HCD"	"MS2"	"40.45546"	"236.8"	"100.000"	"44.7571"	"13201"	"13201"	"13185"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"325.4"	""	"321.7"	""	"321.9"	""	"382.8"	""	"424.1"	"473.5"	""	"604"	"21"	"34.000"	"27.000"	"0.236051596985676"	""	"0.005067"	"0.05717"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSDAELR"	"[K].lSDAELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.2258"	"0.0000"	"1"	"1"	"1"	"516.79791"	"1032.58855"	"1032.58869"	"-0.14"	"-0.00007"	"7/54"	"7"	"54"	"6687807.34570313"	"HCD"	"MS2"	"37.22314"	"276.0"	"100.000"	"44.9094"	"13252"	"13252"	"13232"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"357.8"	""	"375.0"	""	"382.8"	""	"474.1"	""	"513.8"	"513.8"	""	"604"	"31"	"34.000"	"27.000"	"0.0215281615098209"	""	"0.002973"	"0.02888"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSSPVVK"	"[K].TSSSPVVk.[S]"	"K8(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"517.30792"	"1033.60857"	"1033.60909"	"-0.51"	"-0.00026"	"7/62"	"7"	"62"	"7717933.8237915"	"HCD"	"MS2"	"15.05282"	"259.4"	"100.000"	"24.2983"	"4910"	"4910"	"4899"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"326.4"	""	"301.7"	""	"357.4"	""	"413.9"	"6.2"	"563.3"	"493.8"	""	"489"	"66"	"33.000"	"26.000"	"5.9879596263104E-06"	"25"	"0.007808"	"0.09537"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSSPVVK"	"[K].TSSSPVVk.[S]"	"K8(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"517.30811"	"1033.60893"	"1033.60909"	"-0.15"	"-0.00008"	"7/62"	"7"	"62"	"7338079.71704102"	"HCD"	"MS2"	"7.297084"	"258.1"	"100.000"	"24.3865"	"4930"	"4930"	"4918"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"310.9"	""	"287.2"	""	"358.7"	""	"382.6"	"4.8"	"581.8"	"526.5"	""	"477"	"66"	"33.000"	"26.000"	"5.90865160745539E-06"	"25"	"0.007476"	"0.08912"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPVYR"	"[R].vGDPVYR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"O88994"	"Mitochondrial amidoxime reducing component 2 OS=Rattus norvegicus OX=10116 GN=Marc2 PE=2 SV=1"	"O88994"	"Mitochondrial amidoxime reducing component 2 OS=Rattus norvegicus OX=10116 GN=Marc2 PE=2 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"517.79443"	"1034.58159"	"1034.58321"	"-1.57"	"-0.00081"	"5/48"	"5"	"48"	"3225771.56689453"	"HCD"	"MS2"	"29.07294"	"151.1"	"100.000"	"38.4093"	"10613"	"10613"	"10590"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"182.5"	""	"193.6"	""	"190.9"	""	"245.5"	""	"300.1"	"328.4"	""	"516"	"23"	"34.000"	"27.000"	"0.140158585525048"	"18"	"0.003967"	"0.04185"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPVYR"	"[R].vGDPVYR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"O88994"	"Mitochondrial amidoxime reducing component 2 OS=Rattus norvegicus OX=10116 GN=Marc2 PE=2 SV=1"	"O88994"	"Mitochondrial amidoxime reducing component 2 OS=Rattus norvegicus OX=10116 GN=Marc2 PE=2 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"517.79504"	"1034.58281"	"1034.58321"	"-0.39"	"-0.00020"	"5/48"	"5"	"48"	"3426298.15997314"	"HCD"	"MS2"	"19.90203"	"153.9"	"100.000"	"38.2176"	"10543"	"10543"	"10522"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"174.0"	""	"210.7"	""	"186.8"	""	"263.9"	""	"303.5"	"324.0"	""	"509"	"23"	"34.000"	"27.000"	"0.135733730901599"	"20"	"0.003581"	"0.03738"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGTVMR"	"[K].eLGTVMR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"0"	"2"	"2"	"0.4857"	"0.0000"	"1"	"1"	"1"	"517.79700"	"1034.58672"	"1034.58658"	"0.13"	"0.00007"	"5/54"	"5"	"54"	"18166018.3236084"	"HCD"	"MS2"	"0"	"758.3"	"93.912"	"45.0474"	"13320"	"13320"	"13303"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1139.6"	""	"1289.6"	""	"1339.0"	""	"922.4"	""	"1161.3"	"1318.5"	""	"525"	"35"	"34.000"	"27.000"	"0.00918606063449437"	""	"0.003059"	"0.03042"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGTVMR"	"[K].eLGTVMR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"0"	"2"	"2"	"0.4857"	"0.0000"	"1"	"1"	"1"	"517.79749"	"1034.58769"	"1034.58658"	"1.08"	"0.00056"	"5/54"	"5"	"54"	"19577973.4396362"	"HCD"	"MS2"	"0.173526"	"633.9"	"74.802"	"45.2061"	"13373"	"13373"	"13355"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"968.6"	""	"1106.2"	""	"1126.8"	""	"721.5"	""	"994.0"	"1074.8"	""	"520"	"35"	"34.000"	"27.000"	"0.00893250664539673"	""	"0.003922"	"0.04031"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"518.29224"	"1035.57720"	"1035.57846"	"-1.22"	"-0.00063"	"6/66"	"6"	"66"	"2609368.1383667"	"HCD"	"MS2"	"5.316907"	"113.9"	"100.000"	"53.8947"	"16915"	"16915"	"16896"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"170.2"	""	"146.0"	""	"167.8"	""	"164.7"	""	"188.1"	"243.3"	""	"437"	"25"	"33.000"	"26.000"	"0.0773484190267305"	"16"	"0.0003538"	"0.006899"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"518.29236"	"1035.57744"	"1035.57846"	"-0.99"	"-0.00051"	"6/66"	"6"	"66"	"5766189.68994141"	"HCD"	"MS2"	"6.877758"	"260.8"	"100.000"	"51.5749"	"15979"	"15979"	"15957"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"435.6"	""	"349.0"	""	"374.4"	""	"385.5"	""	"427.2"	"500.7"	""	"431"	"32"	"33.000"	"26.000"	"0.0126312774452773"	"18"	"0.0002479"	"0.00594"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"518.29242"	"1035.57756"	"1035.57846"	"-0.87"	"-0.00045"	"7/66"	"7"	"66"	"2992771.85498047"	"HCD"	"MS2"	"0"	"123.2"	"100.000"	"53.6227"	"16815"	"16815"	"16796"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"178.4"	""	"162.2"	""	"175.0"	""	"184.0"	"0.5"	"219.4"	"247.3"	""	"430"	"26"	"33.000"	"26.000"	"0.0585380781236752"	"18"	"0.0001301"	"0.004806"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"518.29242"	"1035.57756"	"1035.57846"	"-0.87"	"-0.00045"	"6/66"	"6"	"66"	"6809927.13922119"	"HCD"	"MS2"	"3.975951"	"280.4"	"100.000"	"49.7631"	"15241"	"15241"	"15222"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"489.1"	""	"399.5"	""	"404.1"	""	"409.5"	"5.0"	"440.7"	"502.8"	""	"430"	"32"	"33.000"	"26.000"	"0.0147041004165507"	"17"	"0.0001301"	"0.004232"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"518.29254"	"1035.57781"	"1035.57846"	"-0.63"	"-0.00033"	"6/66"	"6"	"66"	"4196195.18530273"	"HCD"	"MS2"	"13.32013"	"193.2"	"100.000"	"51.8542"	"16082"	"16082"	"16059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"298.0"	""	"259.5"	""	"266.6"	""	"279.1"	""	"331.2"	"398.4"	""	"430"	"32"	"33.000"	"26.000"	"0.0130749025274925"	"19"	"0.0001301"	"0.004733"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"518.29260"	"1035.57793"	"1035.57846"	"-0.51"	"-0.00027"	"6/66"	"6"	"66"	"9500744.17529297"	"HCD"	"MS2"	"2.540719"	"359.0"	"100.000"	"50.1254"	"15377"	"15377"	"15358"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"643.6"	""	"490.9"	""	"512.1"	""	"520.6"	""	"532.4"	"698.1"	""	"432"	"38"	"33.000"	"26.000"	"0.0033841823114336"	"17"	"0"	"0.002652"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"518.29266"	"1035.57805"	"1035.57846"	"-0.40"	"-0.00020"	"6/66"	"6"	"66"	"2370321.74377441"	"HCD"	"MS2"	"0"	"108.8"	"100.000"	"53.5840"	"16788"	"16788"	"16770"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"171.6"	""	"160.3"	""	"164.5"	""	"152.4"	"0.7"	"170.4"	"208.8"	""	"432"	"32"	"33.000"	"26.000"	"0.0124581556092726"	"17"	"0.0001301"	"0.00407"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"518.29266"	"1035.57805"	"1035.57846"	"-0.40"	"-0.00020"	"6/66"	"6"	"66"	"2459892.74975586"	"HCD"	"MS2"	"4.658713"	"112.6"	"100.000"	"53.3234"	"16693"	"16693"	"16669"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"176.4"	""	"163.6"	""	"175.4"	""	"157.7"	""	"186.3"	"207.5"	""	"432"	"32"	"33.000"	"26.000"	"0.012287223306227"	"17"	"0"	"0.002831"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"518.29297"	"1035.57866"	"1035.57846"	"0.19"	"0.00010"	"6/66"	"6"	"66"	"81566331.4816895"	"HCD"	"MS2"	"0.09919073"	"465.1"	"14.466"	"50.0695"	"15367"	"15367"	"15350"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"771.4"	""	"610.5"	""	"666.2"	""	"680.2"	""	"737.2"	"942.8"	""	"431"	"34"	"33.000"	"26.000"	"0.00886027648980245"	"18"	"0.0003538"	"0.006303"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"518.29364"	"1035.58000"	"1035.57846"	"1.49"	"0.00077"	"6/66"	"6"	"66"	"72168760.9277344"	"HCD"	"MS2"	"0.07444626"	"448.5"	"17.360"	"50.4319"	"15503"	"15503"	"15486"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"737.8"	""	"602.2"	""	"637.2"	""	"644.2"	""	"734.0"	"892.9"	""	"409"	"35"	"33.000"	"26.000"	"0.00639283230576849"	"19"	"0.0003538"	"0.006724"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEGFGLR"	"[K].eEGFGLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V6U9"	"Actin-histidine N-methyltransferase OS=Rattus norvegicus OX=10116 GN=Setd3 PE=1 SV=1"	"G3V6U9"	"Actin-histidine N-methyltransferase OS=Rattus norvegicus OX=10116 GN=Setd3 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"518.78357"	"1036.55986"	"1036.56248"	"-2.52"	"-0.00131"	"6/50"	"6"	"50"	"2438277.72338867"	"HCD"	"MS2"	"24.3773"	"108.1"	"100.000"	"47.4711"	"14307"	"14307"	"14286"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"139.1"	""	"140.8"	""	"162.9"	""	"153.6"	""	"218.6"	"211.8"	""	"444"	"15"	"33.000"	"26.000"	"0.697192930040521"	"17"	"0.007627"	"0.09093"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDFAER"	"[R].aVDFAER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"518.78424"	"1036.56120"	"1036.56248"	"-1.23"	"-0.00064"	"5/54"	"5"	"54"	"6134378.73474121"	"HCD"	"MS2"	"36.99568"	"299.5"	"100.000"	"43.7933"	"12813"	"12813"	"12800"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"375.9"	""	"374.6"	""	"388.7"	""	"514.5"	""	"594.3"	"599.4"	""	"447"	"17"	"33.000"	"26.000"	"0.40112296559707"	"20"	"0.007627"	"0.09294"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADDFR"	"[RK].lAADDFR.[LMTSV]"	"N-Term(TMT6plex)"	"3"	"10"	"Q6IFW6; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1;Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2;Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q6IFV4; Q6IFX1; Q6IFU7; Q6IFV3; Q6IFU8; Q6IFV1; Q6IFW6; Q6IFW2; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 24 OS=Rattus norvegicus OX=10116 GN=Krt24 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1; Keratin, type I cytoskeletal 40 OS=Rattus norvegicus OX=10116 GN=Krt40 PE=3 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2; Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"518.78430"	"1036.56133"	"1036.56248"	"-1.11"	"-0.00057"	"10/50"	"10"	"50"	"4986686.94519043"	"HCD"	"MS2"	"0.6953773"	"212.7"	"100.000"	"52.4741"	"16346"	"16346"	"16328"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"311.0"	""	"299.1"	""	"328.9"	""	"316.8"	""	"334.8"	"424.8"	""	"447"	"29"	"33.000"	"26.000"	"0.0254845827519921"	""	"0.002973"	"0.02973"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDFAER"	"[R].aVDFAER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"518.78430"	"1036.56133"	"1036.56248"	"-1.11"	"-0.00057"	"4/54"	"4"	"54"	"20969716.7694092"	"HCD"	"MS2"	"13.23867"	"623.8"	"66.937"	"43.5204"	"12704"	"12704"	"12692"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"835.8"	""	"807.9"	""	"889.5"	""	"1054.3"	""	"1189.8"	"1144.6"	""	"447"	"22"	"33.000"	"26.000"	"0.155696025903757"	"20"	"0.005119"	"0.05855"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDFAER"	"[R].aVDFAER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"518.78455"	"1036.56182"	"1036.56248"	"-0.64"	"-0.00033"	"5/54"	"5"	"54"	"20731094.1477051"	"HCD"	"MS2"	"12.74481"	"630.6"	"70.422"	"43.6634"	"12752"	"12752"	"12734"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"888.5"	""	"817.3"	""	"887.2"	""	"1102.4"	""	"1159.0"	"1128.5"	""	"445"	"29"	"33.000"	"26.000"	"0.0312126049265036"	"21"	"0.003967"	"0.04135"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADDFR"	"[RK].lAADDFR.[LMTSV]"	"N-Term(TMT6plex)"	"3"	"10"	"Q6IFW6; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1;Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2;Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q6IFV4; Q6IFX1; Q6IFU7; Q6IFV3; Q6IFU8; Q6IFV1; Q6IFW6; Q6IFW2; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 24 OS=Rattus norvegicus OX=10116 GN=Krt24 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1; Keratin, type I cytoskeletal 40 OS=Rattus norvegicus OX=10116 GN=Krt40 PE=3 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2; Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"518.78473"	"1036.56218"	"1036.56248"	"-0.28"	"-0.00015"	"9/50"	"9"	"50"	"5562319.69342041"	"HCD"	"MS2"	"0.4527439"	"233.1"	"100.000"	"52.7306"	"16440"	"16440"	"16423"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"342.9"	""	"319.5"	""	"366.1"	""	"359.2"	"1.2"	"375.8"	"441.4"	""	"449"	"24"	"33.000"	"26.000"	"0.0982237126080276"	"25"	"0.003717"	"0.03822"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADDFR"	"[RK].lAADDFR.[LMTSV]"	"N-Term(TMT6plex)"	"3"	"10"	"Q6IFW6; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1;Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2;Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q6IFV4; Q6IFX1; Q6IFU7; Q6IFV3; Q6IFU8; Q6IFV1; Q6IFW6; Q6IFW2; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 24 OS=Rattus norvegicus OX=10116 GN=Krt24 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1; Keratin, type I cytoskeletal 40 OS=Rattus norvegicus OX=10116 GN=Krt40 PE=3 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2; Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"518.78595"	"1036.56462"	"1036.56248"	"2.07"	"0.00107"	"10/50"	"10"	"50"	"88018572.1181641"	"HCD"	"MS2"	"0.1539629"	"416.4"	"11.566"	"52.4291"	"16317"	"16317"	"16300"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"660.5"	""	"553.4"	""	"649.4"	""	"613.3"	""	"650.5"	"820.2"	""	"419"	"29"	"33.000"	"26.000"	"0.0274273612868376"	""	"0.003967"	"0.04086"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADDFR"	"[RK].lAADDFR.[LMTSV]"	"N-Term(TMT6plex)"	"3"	"10"	"Q6IFW6; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1;Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2;Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q6IFV4; Q6IFX1; Q6IFU7; Q6IFV3; Q6IFU8; Q6IFV1; Q6IFW6; Q6IFW2; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 24 OS=Rattus norvegicus OX=10116 GN=Krt24 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1; Keratin, type I cytoskeletal 40 OS=Rattus norvegicus OX=10116 GN=Krt40 PE=3 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2; Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"518.78595"	"1036.56462"	"1036.56248"	"2.07"	"0.00107"	"10/50"	"10"	"50"	"86929031.4541016"	"HCD"	"MS2"	"0"	"449.5"	"12.471"	"52.1660"	"16221"	"16221"	"16204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"718.0"	""	"601.0"	""	"716.6"	""	"656.9"	""	"696.8"	"871.2"	""	"419"	"30"	"33.000"	"26.000"	"0.020998294737732"	""	"0.006639"	"0.07414"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADDFR"	"[RK].lAADDFR.[LMTSV]"	"N-Term(TMT6plex)"	"3"	"10"	"Q6IFW6; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1;Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2;Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q6IFV4; Q6IFX1; Q6IFU7; Q6IFV3; Q6IFU8; Q6IFV1; Q6IFW6; Q6IFW2; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 24 OS=Rattus norvegicus OX=10116 GN=Krt24 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1; Keratin, type I cytoskeletal 40 OS=Rattus norvegicus OX=10116 GN=Krt40 PE=3 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2; Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"518.78619"	"1036.56511"	"1036.56248"	"2.54"	"0.00132"	"8/50"	"8"	"50"	"61997623.348877"	"HCD"	"MS2"	"0.0805281"	"588.9"	"23.194"	"51.8693"	"16100"	"16100"	"16085"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"947.8"	""	"807.7"	""	"909.8"	""	"901.6"	""	"887.3"	"1126.3"	""	"419"	"23"	"33.000"	"26.000"	"0.101434111008869"	"26"	"0.008478"	"0.1025"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGVYAR"	"[K].iEGVYAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"518.80243"	"1036.59758"	"1036.59886"	"-1.23"	"-0.00064"	"7/48"	"7"	"48"	"3359753.82092285"	"HCD"	"MS2"	"17.96905"	"144.1"	"100.000"	"45.6916"	"13583"	"13583"	"13566"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"187.6"	""	"193.0"	""	"204.8"	""	"219.8"	""	"286.3"	"276.5"	""	"338"	"19"	"32.000"	"25.000"	"0.211293776106794"	"23"	"0.004069"	"0.04483"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGVYAR"	"[K].iEGVYAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"518.80255"	"1036.59783"	"1036.59886"	"-1.00"	"-0.00052"	"5/48"	"5"	"48"	"3454636.89520264"	"HCD"	"MS2"	"14.05933"	"145.3"	"100.000"	"45.8434"	"13632"	"13632"	"13613"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"194.3"	""	"193.7"	""	"204.2"	""	"222.8"	""	"286.3"	"277.5"	""	"332"	"26"	"32.000"	"25.000"	"0.0383802755169149"	"23"	"0.002973"	"0.02864"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGVYAR"	"[K].iEGVYAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"518.80261"	"1036.59795"	"1036.59886"	"-0.88"	"-0.00046"	"5/48"	"5"	"48"	"7913368.70904541"	"HCD"	"MS2"	"12.24444"	"326.9"	"100.000"	"45.3948"	"13462"	"13462"	"13447"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"462.4"	""	"446.8"	""	"492.9"	""	"497.4"	""	"606.6"	"592.0"	""	"332"	"34"	"32.000"	"25.000"	"0.00608286373915404"	""	"0.001886"	"0.02156"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGVYAR"	"[K].iEGVYAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"518.80273"	"1036.59819"	"1036.59886"	"-0.65"	"-0.00033"	"5/48"	"5"	"48"	"7161352.35430908"	"HCD"	"MS2"	"11.92194"	"314.3"	"100.000"	"45.5350"	"13507"	"13507"	"13491"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"453.4"	""	"427.5"	""	"472.6"	""	"481.6"	""	"568.3"	"578.5"	""	"332"	"34"	"32.000"	"25.000"	"0.00609688618826821"	"25"	"0.002056"	"0.02216"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMDASER"	"[R].tMDASER.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P13601"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"519.75769"	"1038.50810"	"1038.50873"	"-0.60"	"-0.00031"	"5/58"	"5"	"58"	"6671123.72918701"	"HCD"	"MS2"	"19.04168"	"351.7"	"100.000"	"22.2499"	"4082"	"4082"	"4065"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"609.8"	""	"454.3"	""	"503.3"	""	"467.3"	""	"617.2"	"677.5"	""	"294"	"36"	"31.000"	"24.000"	"0.00387540713716331"	""	"0.00413"	"0.04541"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMDASER"	"[R].tMDASER.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P13601"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"519.75787"	"1038.50847"	"1038.50873"	"-0.25"	"-0.00013"	"9/58"	"9"	"58"	"7846252.81091309"	"HCD"	"MS2"	"15.72503"	"383.9"	"100.000"	"22.3303"	"4098"	"4098"	"4072"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"650.4"	""	"494.0"	""	"567.0"	""	"470.4"	""	"664.1"	"790.5"	""	"294"	"32"	"31.000"	"24.000"	"0.00953492617315911"	"22"	"0.004867"	"0.05225"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLDFSDR"	"[K].gLDFSDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"0"	"2"	"2"	"0.5750"	"0.0000"	"1"	"1"	"1"	"519.77399"	"1038.54070"	"1038.54174"	"-1.00"	"-0.00052"	"6/54"	"6"	"54"	"4524660.472229"	"HCD"	"MS2"	"9.407138"	"212.7"	"100.000"	"50.5064"	"15544"	"15544"	"15529"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"235.3"	""	"220.5"	""	"276.6"	""	"409.6"	""	"426.2"	"453.9"	""	"364"	"40"	"32.000"	"25.000"	"0.00175013434665827"	""	"0.000936"	"0.01287"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLDFSDR"	"[K].gLDFSDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"0"	"2"	"2"	"0.4516"	"0.0000"	"1"	"1"	"1"	"519.77435"	"1038.54143"	"1038.54174"	"-0.30"	"-0.00016"	"6/54"	"6"	"54"	"6659459.00274658"	"HCD"	"MS2"	"25.70303"	"298.1"	"100.000"	"50.6984"	"15611"	"15611"	"15592"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"362.6"	""	"312.9"	""	"413.5"	""	"540.1"	""	"607.1"	"599.7"	""	"372"	"31"	"32.000"	"25.000"	"0.0137883704881971"	""	"0.001465"	"0.01815"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTGSEIR"	"[KR].fTGSEIR.[VH]"	"N-Term(TMT6plex)"	"1"	"2"	"Q68FY0"	"Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"Q03346; Q68FY0"	"Mitochondrial-processing peptidase subunit beta OS=Rattus norvegicus OX=10116 GN=Pmpcb PE=1 SV=3; Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"519.79120"	"1038.57512"	"1038.57813"	"-2.89"	"-0.00150"	"5/54"	"5"	"54"	"5960458.7645874"	"HCD"	"MS2"	"0"	"267.7"	"100.000"	"41.3092"	"11801"	"11801"	"11785"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"328.3"	""	"377.6"	""	"384.8"	""	"422.8"	""	"492.7"	"533.6"	""	"328"	"36"	"32.000"	"25.000"	"0.00378306538950092"	"20"	"0.002973"	"0.02823"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTGSEIR"	"[KR].fTGSEIR.[VH]"	"N-Term(TMT6plex)"	"1"	"2"	"Q68FY0"	"Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"Q03346; Q68FY0"	"Mitochondrial-processing peptidase subunit beta OS=Rattus norvegicus OX=10116 GN=Pmpcb PE=1 SV=3; Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"519.79120"	"1038.57512"	"1038.57813"	"-2.89"	"-0.00150"	"5/54"	"5"	"54"	"6216025.76519775"	"HCD"	"MS2"	"3.692821"	"287.5"	"100.000"	"41.4772"	"11860"	"11860"	"11848"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"349.2"	""	"404.5"	""	"414.5"	""	"443.4"	""	"532.5"	"585.3"	""	"328"	"39"	"32.000"	"25.000"	"0.00187000965160032"	"22"	"0.003507"	"0.03642"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYSDLSR"	"[R].aYSDLSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P23680"	"Serum amyloid P-component OS=Rattus norvegicus OX=10116 GN=Apcs PE=2 SV=2"	"P23680"	"Serum amyloid P-component OS=Rattus norvegicus OX=10116 GN=Apcs PE=2 SV=2"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"520.78186"	"1040.55644"	"1040.55739"	"-0.91"	"-0.00047"	"5/54"	"5"	"54"	"3483892.39080811"	"HCD"	"MS2"	"12.70898"	"190.7"	"100.000"	"33.3356"	"8562"	"8562"	"8544"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"212.4"	""	"230.1"	""	"235.4"	""	"377.2"	""	"364.9"	"390.0"	""	"300"	"19"	"31.000"	"24.000"	"0.169079618426327"	"22"	"0.004431"	"0.04647"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYSDLSR"	"[R].aYSDLSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P23680"	"Serum amyloid P-component OS=Rattus norvegicus OX=10116 GN=Apcs PE=2 SV=2"	"P23680"	"Serum amyloid P-component OS=Rattus norvegicus OX=10116 GN=Apcs PE=2 SV=2"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"520.78192"	"1040.55657"	"1040.55739"	"-0.79"	"-0.00041"	"6/54"	"6"	"54"	"3453537.20111084"	"HCD"	"MS2"	"19.24576"	"181.0"	"100.000"	"33.3309"	"8567"	"8567"	"8550"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"199.0"	""	"229.1"	""	"221.7"	""	"346.6"	""	"332.4"	"389.0"	""	"300"	"20"	"31.000"	"24.000"	"0.148282964198541"	"23"	"0.003449"	"0.03458"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGTDLSR"	"[K].yGTDLSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"520.78192"	"1040.55657"	"1040.55739"	"-0.79"	"-0.00041"	"10/54"	"10"	"54"	"4774857.10083008"	"HCD"	"MS2"	"11.33953"	"254.9"	"100.000"	"33.9736"	"8817"	"8817"	"8793"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"304.9"	""	"319.5"	""	"310.2"	""	"420.2"	""	"529.6"	"544.8"	""	"300"	"21"	"31.000"	"24.000"	"0.131247566284115"	"23"	"0.003717"	"0.0387"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGTDLSR"	"[K].yGTDLSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"520.78210"	"1040.55693"	"1040.55739"	"-0.44"	"-0.00023"	"5/54"	"5"	"54"	"7435442.89538574"	"HCD"	"MS2"	"1.607675"	"347.1"	"100.000"	"33.9885"	"8829"	"8829"	"8808"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"399.5"	""	"404.7"	""	"440.2"	""	"576.3"	""	"736.2"	"747.0"	""	"312"	"24"	"31.000"	"24.000"	"0.0615353391237435"	""	"0.003581"	"0.03709"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVPDER"	"[R].vPVPDER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"520.79889"	"1040.59050"	"1040.59378"	"-3.15"	"-0.00164"	"5/50"	"5"	"50"	"5610477.48699951"	"HCD"	"MS2"	"3.631037"	"156.4"	"100.000"	"41.1760"	"11748"	"11748"	"11738"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"234.1"	""	"212.3"	""	"213.7"	""	"242.7"	""	"286.4"	"295.2"	""	"257"	"22"	"31.000"	"24.000"	"0.088085237099167"	"21"	"0.005829"	"0.0647"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVLPQR"	"[R].eAVLPQR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"521.31592"	"1041.62456"	"1041.62541"	"-0.82"	"-0.00043"	"5/50"	"5"	"50"	"2762170.71807861"	"HCD"	"MS2"	"11.17312"	"114.1"	"100.000"	"36.2144"	"9727"	"9727"	"9709"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"182.5"	""	"149.8"	""	"167.6"	""	"174.6"	""	"191.2"	"215.5"	""	"224"	"28"	"30.000"	"23.000"	"0.01816427309042"	"23"	"0.004022"	"0.04254"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELQGPR"	"[R].lELQGPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"521.31610"	"1041.62493"	"1041.62541"	"-0.47"	"-0.00024"	"5/54"	"5"	"54"	"1862295.13085938"	"HCD"	"MS2"	"23.78999"	"82.9"	"100.000"	"49.4735"	"15111"	"15111"	"15089"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"109.8"	""	"89.8"	""	"117.0"	""	"160.3"	""	"156.0"	"154.0"	""	"224"	"18"	"30.000"	"23.000"	"0.1652791317269"	""	"0.005617"	"0.06349"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELQGPR"	"[R].lELQGPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"521.31610"	"1041.62493"	"1041.62541"	"-0.47"	"-0.00024"	"5/54"	"5"	"54"	"2092234.05297852"	"HCD"	"MS2"	"28.30095"	"98.8"	"100.000"	"49.1228"	"14980"	"14980"	"14960"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"140.8"	""	"133.9"	""	"128.4"	""	"180.8"	""	"178.0"	"180.5"	""	"224"	"14"	"30.000"	"23.000"	"0.491154381507984"	"22"	"0.005617"	"0.06367"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVLPQR"	"[R].eAVLPQR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"521.31610"	"1041.62493"	"1041.62541"	"-0.47"	"-0.00024"	"6/50"	"6"	"50"	"3060132.70648193"	"HCD"	"MS2"	"46.03638"	"130.7"	"100.000"	"35.9952"	"9644"	"9644"	"9625"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"207.1"	""	"159.9"	""	"190.0"	""	"206.8"	""	"246.1"	"228.0"	""	"224"	"15"	"30.000"	"23.000"	"0.350120889117883"	"21"	"0.002795"	"0.02654"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELQGPR"	"[R].lELQGPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"521.31610"	"1041.62493"	"1041.62541"	"-0.47"	"-0.00024"	"5/54"	"5"	"54"	"4149847.215271"	"HCD"	"MS2"	"13.17209"	"173.6"	"100.000"	"48.8005"	"14849"	"14849"	"14831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"258.7"	""	"217.0"	""	"205.2"	""	"318.5"	"0.2"	"329.3"	"316.9"	""	"224"	"25"	"30.000"	"23.000"	"0.0361591341631815"	""	"0.003449"	"0.03509"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAALGPIR"	"[K].dAALGPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"B2RYN7"	"Spastin OS=Rattus norvegicus OX=10116 GN=Spast PE=1 SV=1"	"B2RYN7"	"Spastin OS=Rattus norvegicus OX=10116 GN=Spast PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"521.31616"	"1041.62505"	"1041.62541"	"-0.35"	"-0.00018"	"6/56"	"6"	"56"	"1463503.41687012"	"HCD"	"MS2"	"41.60217"	"64.4"	"100.000"	"46.2923"	"13816"	"13816"	"13789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.1"	""	"83.7"	""	"91.6"	""	"101.1"	""	"113.9"	"133.7"	""	"224"	"10"	"30.000"	"23.000"	"1.20564103926541"	"16"	"0.005617"	"0.06358"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELQGPR"	"[R].lELQGPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"521.31622"	"1041.62517"	"1041.62541"	"-0.23"	"-0.00012"	"5/54"	"5"	"54"	"4355477.18463135"	"HCD"	"MS2"	"7.785067"	"184.0"	"100.000"	"49.1653"	"14985"	"14985"	"14966"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"267.0"	""	"219.8"	""	"223.7"	""	"323.6"	""	"355.1"	"360.3"	""	"220"	"25"	"30.000"	"23.000"	"0.0348652420934784"	""	"0.003449"	"0.03267"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEAHSR"	"[K].tIEAHSR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"521.79523"	"1042.58318"	"1042.58427"	"-1.05"	"-0.00055"	"5/58"	"5"	"58"	"11582211.8132935"	"HCD"	"MS2"	"0"	"472.3"	"100.000"	"19.3702"	"2936"	"2936"	"2928"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"762.5"	""	"647.9"	""	"671.0"	""	"758.6"	""	"776.7"	"855.2"	""	"296"	"27"	"31.000"	"24.000"	"0.030009704248915"	"18"	"0.004867"	"0.05232"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEAHSR"	"[K].tIEAHSR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"521.79535"	"1042.58342"	"1042.58427"	"-0.82"	"-0.00043"	"5/58"	"5"	"58"	"5290816.6697998"	"HCD"	"MS2"	"0"	"222.6"	"100.000"	"19.4075"	"2945"	"2945"	"2937"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"345.6"	""	"297.9"	""	"319.0"	""	"370.9"	""	"370.8"	"403.2"	""	"296"	"22"	"31.000"	"24.000"	"0.0885649160689273"	"20"	"0.004817"	"0.05089"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAAEGPLK"	"[K].QAAEGPLk.[G]"	"K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"521.80823"	"1042.60918"	"1042.60943"	"-0.24"	"-0.00012"	"6/70"	"6"	"70"	"6240469.53771973"	"HCD"	"MS2"	"17.21694"	"109.2"	"100.000"	"48.3169"	"14652"	"14652"	"14626"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"174.7"	""	"167.6"	""	"160.0"	""	"145.7"	""	"176.0"	"210.1"	""	"320"	"41"	"32.000"	"25.000"	"0.00130653179417375"	"19"	"0.004942"	"0.05449"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAQAVLL"	"[R].eAAQAVLL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"D4A2H2"	"Serine palmitoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Sptlc1 PE=1 SV=1"	"D4A2H2"	"Serine palmitoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Sptlc1 PE=1 SV=1"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"522.31812"	"1043.62895"	"1043.62983"	"-0.84"	"-0.00044"	"6/56"	"6"	"56"	"488210.354187012"	"HCD"	"MS2"	"6.365363"	"8.5"	"100.000"	"84.0522"	"29097"	"29097"	"29078"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.7"	""	"9.4"	""	"13.2"	""	"15.2"	""	"18.4"	"14.8"	""	"329"	"32"	"32.000"	"25.000"	"0.0114068545089726"	""	"0.0006732"	"0.008413"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAQAVLL"	"[R].eAAQAVLL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"D4A2H2"	"Serine palmitoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Sptlc1 PE=1 SV=1"	"D4A2H2"	"Serine palmitoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Sptlc1 PE=1 SV=1"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"522.31818"	"1043.62908"	"1043.62983"	"-0.72"	"-0.00038"	"6/56"	"6"	"56"	"375756.581054688"	"HCD"	"MS2"	"43.54688"	"8.8"	"100.000"	"83.5776"	"28907"	"28907"	"28886"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.6"	""	"12.6"	""	"9.6"	""	"16.3"	""	"17.2"	"16.0"	""	"329"	"27"	"32.000"	"25.000"	"0.0293877206063162"	"25"	"0.000936"	"0.01182"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAQAVLL"	"[R].eAAQAVLL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"D4A2H2"	"Serine palmitoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Sptlc1 PE=1 SV=1"	"D4A2H2"	"Serine palmitoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Sptlc1 PE=1 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"522.31818"	"1043.62908"	"1043.62983"	"-0.72"	"-0.00038"	"6/56"	"6"	"56"	"533166.225158691"	"HCD"	"MS2"	"6.155407"	"9.7"	"100.000"	"84.0403"	"29091"	"29091"	"29072"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.2"	""	"10.4"	""	"11.1"	""	"20.9"	""	"18.1"	"23.2"	""	"329"	"29"	"32.000"	"25.000"	"0.0203313352801622"	"25"	"0.0008629"	"0.01069"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAQAVLL"	"[R].eAAQAVLL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"D4A2H2"	"Serine palmitoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Sptlc1 PE=1 SV=1"	"D4A2H2"	"Serine palmitoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Sptlc1 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"522.31830"	"1043.62932"	"1043.62983"	"-0.49"	"-0.00025"	"5/56"	"5"	"56"	"323822.316223145"	"HCD"	"MS2"	"44.14457"	"7.6"	"100.000"	"83.5735"	"28908"	"28908"	"28888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.2"	""	"8.7"	""	"5.1"	""	"13.4"	""	"16.6"	"16.5"	""	"329"	"18"	"32.000"	"25.000"	"0.274894406054111"	"21"	"0.001886"	"0.02115"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSSSAK"	"[-].mFSSSAk.[I]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"P62083"	"40S ribosomal protein S7 OS=Rattus norvegicus OX=10116 GN=Rps7 PE=1 SV=1"	"P62083"	"40S ribosomal protein S7 OS=Rattus norvegicus OX=10116 GN=Rps7 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"522.76477"	"1044.52226"	"1044.52331"	"-1.00"	"-0.00052"	"6/52"	"6"	"52"	"3600192.27423096"	"HCD"	"MS2"	"30.05895"	"143.1"	"100.000"	"42.3530"	"12228"	"12228"	"12204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"190.4"	""	"224.2"	""	"252.8"	""	"275.7"	"2.2"	"213.2"	"192.4"	""	"221"	"36"	"30.000"	"23.000"	"0.00266908422206166"	"21"	"0.002547"	"0.02515"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSSSAK"	"[-].mFSSSAk.[I]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"P62083"	"40S ribosomal protein S7 OS=Rattus norvegicus OX=10116 GN=Rps7 PE=1 SV=1"	"P62083"	"40S ribosomal protein S7 OS=Rattus norvegicus OX=10116 GN=Rps7 PE=1 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"522.76508"	"1044.52287"	"1044.52331"	"-0.42"	"-0.00022"	"6/52"	"6"	"52"	"3389577.1552124"	"HCD"	"MS2"	"13.71954"	"137.1"	"100.000"	"42.4774"	"12268"	"12268"	"12245"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"178.8"	""	"231.3"	""	"222.7"	""	"262.1"	"0.3"	"211.5"	"188.9"	""	"275"	"40"	"31.000"	"24.000"	"0.00142004693292192"	"22"	"0.003507"	"0.0362"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVPSSIL"	"[R].eAVPSSIL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V885"	"Collectin-12 OS=Rattus norvegicus OX=10116 GN=Colec12 PE=2 SV=1"	"Q4V885"	"Collectin-12 OS=Rattus norvegicus OX=10116 GN=Colec12 PE=2 SV=1"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"522.81042"	"1044.61357"	"1044.61384"	"-0.26"	"-0.00013"	"5/68"	"5"	"68"	"352499.897949219"	"HCD"	"MS2"	"23.3312"	"6.7"	"100.000"	"87.5721"	"30478"	"30478"	"30461"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.6"	""	"9.1"	""	"7.4"	""	"15.2"	""	"10.5"	"14.7"	""	"512"	"19"	"34.000"	"27.000"	"0.313501747011852"	"26"	"0.001374"	"0.01662"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLPTLR"	"[R].eSLPTLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"522.81519"	"1044.62309"	"1044.62508"	"-1.90"	"-0.00099"	"5/56"	"5"	"56"	"6336723.45458984"	"HCD"	"MS2"	"2.556139"	"246.6"	"100.000"	"52.5049"	"16347"	"16347"	"16332"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"371.8"	""	"354.9"	""	"341.7"	""	"405.6"	""	"436.3"	"427.8"	""	"525"	"27"	"34.000"	"27.000"	"0.0543412104057649"	"26"	"0.004942"	"0.05323"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNIALLR"	"[R].nnIALLR.[T]"	"N-Term(TMT6plex); N1(Deamidated); N2(Deamidated)"	"1"	"1"	"Q6AY28"	"Inactive serine protease 54 OS=Rattus norvegicus OX=10116 GN=Prss54 PE=1 SV=1"	"Q6AY28"	"Inactive serine protease 54 OS=Rattus norvegicus OX=10116 GN=Prss54 PE=1 SV=1"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"522.81525"	"1044.62322"	"1044.62508"	"-1.78"	"-0.00093"	"5/62"	"5"	"62"	"1948432.8104248"	"HCD"	"MS2"	"28.50769"	"82.2"	"100.000"	"66.7415"	"22115"	"22115"	"22093"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"120.8"	""	"101.4"	""	"106.9"	""	"144.4"	""	"141.5"	"164.3"	""	"525"	"25"	"34.000"	"27.000"	"0.0843585891393084"	""	"0.00736"	"0.08522"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLPTLR"	"[R].eSLPTLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"522.81525"	"1044.62322"	"1044.62508"	"-1.78"	"-0.00093"	"5/56"	"5"	"56"	"2674670.38140869"	"HCD"	"MS2"	"25.34267"	"114.4"	"100.000"	"51.9474"	"16131"	"16131"	"16111"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"178.8"	""	"162.3"	""	"163.5"	""	"184.3"	""	"193.7"	"199.8"	""	"525"	"28"	"34.000"	"27.000"	"0.0438661286256561"	"24"	"0.008052"	"0.09818"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLPTLR"	"[R].eSLPTLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"522.81525"	"1044.62322"	"1044.62508"	"-1.78"	"-0.00093"	"5/56"	"5"	"56"	"6105221.42407227"	"HCD"	"MS2"	"2.637949"	"229.0"	"100.000"	"52.2463"	"16253"	"16253"	"16236"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"368.1"	""	"330.1"	""	"313.3"	""	"356.9"	""	"406.0"	"395.6"	""	"525"	"28"	"34.000"	"27.000"	"0.0390058106100339"	"27"	"0.004069"	"0.0442"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLVER"	"[RK].lADLVER.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"Q66HF8; Q63639"	"Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh1b1 PE=1 SV=1; Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"522.81555"	"1044.62383"	"1044.62508"	"-1.20"	"-0.00062"	"10/54"	"10"	"54"	"2208203.13647461"	"HCD"	"MS2"	"23.12159"	"86.9"	"100.000"	"67.3504"	"22364"	"22364"	"22347"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"144.1"	""	"113.8"	""	"124.6"	""	"128.6"	""	"168.4"	"148.6"	""	"525"	"16"	"34.000"	"27.000"	"0.667005335206693"	"19"	"0.004542"	"0.04913"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIIGDR"	"[R].eLIIGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"522.81555"	"1044.62383"	"1044.62508"	"-1.20"	"-0.00062"	"5/58"	"5"	"58"	"3032041.40600586"	"HCD"	"MS2"	"21.23425"	"139.3"	"100.000"	"55.1175"	"17408"	"17408"	"17386"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"221.6"	""	"199.3"	""	"201.3"	""	"214.7"	"1.5"	"235.4"	"244.6"	""	"525"	"25"	"34.000"	"27.000"	"0.0758803469120937"	""	"0.003449"	"0.03272"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIIGDR"	"[R].eLIIGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"522.81561"	"1044.62395"	"1044.62508"	"-1.08"	"-0.00056"	"5/58"	"5"	"58"	"26707403.6749268"	"HCD"	"MS2"	"0.3694918"	"498.9"	"48.838"	"55.4095"	"17528"	"17528"	"17511"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"648.7"	""	"682.7"	""	"720.6"	""	"820.0"	""	"911.6"	"954.9"	""	"525"	"30"	"34.000"	"27.000"	"0.0235575058556447"	""	"0.003967"	"0.04182"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILPSTR"	"[R].eILPSTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"522.81561"	"1044.62395"	"1044.62508"	"-1.08"	"-0.00056"	"4/58"	"4"	"58"	"6360684.39282227"	"HCD"	"MS2"	"32.8021"	"242.8"	"100.000"	"42.7165"	"12377"	"12377"	"12360"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"332.7"	""	"302.4"	""	"321.9"	""	"446.1"	"4.9"	"449.0"	"444.3"	""	"525"	"16"	"34.000"	"27.000"	"0.636985149959135"	"24"	"0.007018"	"0.08149"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDLLDR"	"[K].aLDLLDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.5952"	"0.0000"	"1"	"1"	"3"	"522.81567"	"1044.62407"	"1044.62508"	"-0.96"	"-0.00050"	"6/54"	"6"	"54"	"2329766.22814941"	"HCD"	"MS2"	"6.538802"	"101.9"	"100.000"	"76.5166"	"26083"	"26083"	"26066"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"147.3"	""	"133.0"	""	"145.3"	""	"167.3"	""	"177.8"	"195.2"	""	"525"	"42"	"34.000"	"27.000"	"0.00179113907212188"	""	"0.001211"	"0.0141"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLVER"	"[RK].lADLVER.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"Q66HF8; Q63639"	"Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh1b1 PE=1 SV=1; Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"522.81567"	"1044.62407"	"1044.62508"	"-0.96"	"-0.00050"	"5/54"	"5"	"54"	"2234996.0692749"	"HCD"	"MS2"	"17.36425"	"85.3"	"100.000"	"67.4418"	"22386"	"22386"	"22369"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"135.8"	""	"100.0"	""	"129.0"	""	"124.7"	"1.8"	"159.7"	"157.3"	""	"525"	"24"	"34.000"	"27.000"	"0.0959686327984453"	"20"	"0.003967"	"0.04148"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIIGDR"	"[R].eLIIGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"522.81573"	"1044.62419"	"1044.62508"	"-0.84"	"-0.00044"	"5/58"	"5"	"58"	"6595383.39880371"	"HCD"	"MS2"	"4.406992"	"270.9"	"100.000"	"54.9589"	"17357"	"17357"	"17345"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"406.6"	""	"399.1"	""	"390.8"	""	"441.5"	""	"452.7"	"475.8"	""	"525"	"30"	"34.000"	"27.000"	"0.0257708835042746"	""	"0.003449"	"0.03362"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIIGDR"	"[R].eLIIGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.3043"	"0.0000"	"1"	"1"	"1"	"522.81573"	"1044.62419"	"1044.62508"	"-0.84"	"-0.00044"	"6/58"	"6"	"58"	"4074464.49658203"	"HCD"	"MS2"	"11.98792"	"161.9"	"100.000"	"55.7158"	"17652"	"17652"	"17634"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"206.9"	""	"213.4"	""	"242.0"	""	"244.7"	""	"304.3"	"325.7"	""	"525"	"23"	"34.000"	"27.000"	"0.134626113297733"	""	"0.00413"	"0.04555"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILPSTR"	"[R].eILPSTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"522.81573"	"1044.62419"	"1044.62508"	"-0.84"	"-0.00044"	"4/58"	"4"	"58"	"6422202.20281982"	"HCD"	"MS2"	"31.60152"	"259.2"	"100.000"	"42.8453"	"12418"	"12418"	"12402"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"349.1"	""	"342.5"	""	"356.3"	""	"474.6"	"0.7"	"472.2"	"460.5"	""	"525"	"16"	"34.000"	"27.000"	"0.638453552381877"	"24"	"0.006958"	"0.08098"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDLLDR"	"[K].aLDLLDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"3"	"522.81580"	"1044.62432"	"1044.62508"	"-0.73"	"-0.00038"	"6/54"	"6"	"54"	"1835976.76361084"	"HCD"	"MS2"	"7.151772"	"81.8"	"100.000"	"76.6653"	"26134"	"26134"	"26120"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"118.6"	""	"102.6"	""	"116.7"	""	"132.7"	""	"149.8"	"154.7"	""	"527"	"37"	"34.000"	"27.000"	"0.00494061052875764"	""	"0.000936"	"0.01129"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIIGDR"	"[R].eLIIGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"522.81580"	"1044.62432"	"1044.62508"	"-0.73"	"-0.00038"	"6/58"	"6"	"58"	"2951033.14221191"	"HCD"	"MS2"	"25.33744"	"118.0"	"100.000"	"55.5711"	"17607"	"17607"	"17589"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"154.4"	""	"153.0"	""	"172.0"	""	"186.0"	""	"224.0"	"233.7"	""	"527"	"24"	"34.000"	"27.000"	"0.109088914314999"	""	"0.004942"	"0.05293"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPTEVR"	"[R].lTPTEVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"522.81586"	"1044.62444"	"1044.62508"	"-0.61"	"-0.00032"	"7/54"	"7"	"54"	"16983520.3406372"	"HCD"	"MS2"	"14.08408"	"508.8"	"76.062"	"38.9170"	"10829"	"10829"	"10812"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"768.1"	""	"667.4"	""	"709.9"	""	"806.4"	"8.5"	"950.3"	"909.4"	""	"527"	"28"	"34.000"	"27.000"	"0.0442364858775295"	"26"	"0.007627"	"0.09323"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDLLDR"	"[K].aLDLLDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"3"	"522.81598"	"1044.62468"	"1044.62508"	"-0.38"	"-0.00020"	"6/54"	"6"	"54"	"1412609.88726807"	"HCD"	"MS2"	"31.69661"	"63.4"	"100.000"	"76.3604"	"26010"	"26010"	"25992"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.1"	""	"80.9"	""	"81.5"	""	"110.0"	""	"116.6"	"120.8"	""	"527"	"36"	"34.000"	"27.000"	"0.00675741543622419"	""	"0.001374"	"0.01585"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIIGDR"	"[R].eLIIGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.3611"	"0.0000"	"1"	"1"	"1"	"522.81598"	"1044.62468"	"1044.62508"	"-0.38"	"-0.00020"	"6/58"	"6"	"58"	"24758085.9724121"	"HCD"	"MS2"	"0.5143481"	"446.4"	"47.292"	"55.2578"	"17480"	"17480"	"17463"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"580.6"	"3.1"	"625.6"	""	"628.7"	""	"714.3"	""	"816.8"	"868.8"	""	"527"	"36"	"34.000"	"27.000"	"0.00702717258101409"	""	"0.003111"	"0.0318"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEVAVR"	"[K].eLEVAVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYS4"	"Plasma alpha-L-fucosidase OS=Rattus norvegicus OX=10116 GN=Fuca2 PE=2 SV=1"	"Q6AYS4"	"Plasma alpha-L-fucosidase OS=Rattus norvegicus OX=10116 GN=Fuca2 PE=2 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"522.81610"	"1044.62493"	"1044.62508"	"-0.14"	"-0.00008"	"6/52"	"6"	"52"	"3219608.00622559"	"HCD"	"MS2"	"0"	"145.4"	"100.000"	"48.8594"	"14860"	"14860"	"14840"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"228.4"	""	"236.5"	""	"206.6"	""	"211.5"	""	"243.6"	"249.9"	""	"514"	"16"	"34.000"	"27.000"	"0.595570425041899"	"25"	"0.008437"	"0.1021"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPTEVR"	"[R].lTPTEVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"522.81610"	"1044.62493"	"1044.62508"	"-0.14"	"-0.00008"	"7/54"	"7"	"54"	"13885569.6571655"	"HCD"	"MS2"	"23.13826"	"399.5"	"76.302"	"39.0764"	"10885"	"10885"	"10868"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"610.7"	""	"519.2"	""	"561.3"	""	"630.1"	"8.0"	"754.3"	"701.1"	""	"514"	"30"	"34.000"	"27.000"	"0.0238744361402444"	"27"	"0.006308"	"0.07175"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDLLDR"	"[K].aLDLLDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"522.81647"	"1044.62566"	"1044.62508"	"0.56"	"0.00029"	"6/54"	"6"	"54"	"812226.966125488"	"HCD"	"MS2"	"57.97425"	"38.7"	"100.000"	"76.1978"	"25953"	"25953"	"25935"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.1"	""	"54.6"	""	"52.1"	""	"64.7"	"1.3"	"69.9"	"72.4"	""	"426"	"33"	"33.000"	"26.000"	"0.0100549427789145"	"25"	"0.0003538"	"0.006598"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNIALLR"	"[R].nnIALLR.[T]"	"N-Term(TMT6plex); N1(Deamidated); N2(Deamidated)"	"1"	"1"	"Q6AY28"	"Inactive serine protease 54 OS=Rattus norvegicus OX=10116 GN=Prss54 PE=1 SV=1"	"Q6AY28"	"Inactive serine protease 54 OS=Rattus norvegicus OX=10116 GN=Prss54 PE=1 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"522.81732"	"1044.62737"	"1044.62508"	"2.19"	"0.00115"	"5/62"	"5"	"62"	"1723136.11242676"	"HCD"	"MS2"	"45.16346"	"70.7"	"100.000"	"66.8373"	"22139"	"22139"	"22116"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"97.8"	""	"88.3"	""	"102.9"	""	"120.1"	""	"128.3"	"133.7"	""	"471"	"26"	"33.000"	"26.000"	"0.0537020557956098"	""	"0.001635"	"0.0199"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLPGDSR"	"[R].gDLPGDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.3810"	"0.0000"	"1"	"1"	"1"	"523.27686"	"1045.54643"	"1045.54755"	"-1.07"	"-0.00056"	"7/66"	"7"	"66"	"7705457.16027832"	"HCD"	"MS2"	"43.93684"	"331.7"	"100.000"	"28.0107"	"6396"	"6396"	"6374"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"540.4"	""	"400.5"	""	"330.1"	""	"712.8"	""	"614.1"	"545.0"	""	"416"	"21"	"33.000"	"26.000"	"0.153484079866853"	""	"0.0001301"	"0.004582"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLPGDSR"	"[R].gDLPGDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"523.27716"	"1045.54704"	"1045.54755"	"-0.49"	"-0.00025"	"6/66"	"6"	"66"	"8413581.82128906"	"HCD"	"MS2"	"45.66484"	"358.2"	"100.000"	"27.9530"	"6387"	"6387"	"6365"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"575.0"	""	"422.4"	""	"379.7"	""	"775.0"	""	"629.8"	"612.0"	""	"437"	"24"	"33.000"	"26.000"	"0.0846157954153733"	""	"0.0003538"	"0.00625"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIEVGGGR"	"[K].eIEVGGGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62083"	"40S ribosomal protein S7 OS=Rattus norvegicus OX=10116 GN=Rps7 PE=1 SV=1"	"P62083"	"40S ribosomal protein S7 OS=Rattus norvegicus OX=10116 GN=Rps7 PE=1 SV=1"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"523.29541"	"1045.58354"	"1045.58394"	"-0.38"	"-0.00020"	"7/60"	"7"	"60"	"5881647.98406982"	"HCD"	"MS2"	"3.562587"	"253.2"	"100.000"	"33.8040"	"8758"	"8758"	"8731"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"445.3"	""	"398.9"	""	"412.8"	""	"366.8"	"5.0"	"373.9"	"387.1"	""	"541"	"26"	"34.000"	"27.000"	"0.0755383109054699"	"25"	"0.001211"	"0.01416"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEQAER"	"[KR].lAEQAER.[Y]"	"N-Term(TMT6plex)"	"5"	"6"	"P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2;14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"523.29541"	"1045.58354"	"1045.58394"	"-0.38"	"-0.00020"	"5/60"	"5"	"60"	"18858962.2877197"	"HCD"	"MS2"	"0"	"796.0"	"100.000"	"25.7732"	"5503"	"5503"	"5480"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1106.8"	""	"853.9"	""	"997.8"	""	"1379.8"	""	"1558.4"	"1665.1"	""	"541"	"35"	"34.000"	"27.000"	"0.00918686362357054"	""	"0.003358"	"0.03234"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEQAER"	"[KR].lAEQAER.[Y]"	"N-Term(TMT6plex)"	"5"	"6"	"P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2;14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"523.29559"	"1045.58391"	"1045.58394"	"-0.03"	"-0.00001"	"4/60"	"4"	"60"	"17502080.0949707"	"HCD"	"MS2"	"0"	"331.2"	"46.958"	"26.1154"	"5627"	"5627"	"5617"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"417.1"	""	"362.8"	""	"415.9"	""	"562.6"	""	"700.9"	"693.8"	""	"539"	"24"	"34.000"	"27.000"	"0.11549382624711"	""	"0.005921"	"0.06801"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEQAER"	"[KR].lAEQAER.[Y]"	"N-Term(TMT6plex)"	"5"	"6"	"P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2;14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"523.29565"	"1045.58403"	"1045.58394"	"0.09"	"0.00005"	"5/60"	"5"	"60"	"17753176.3641357"	"HCD"	"MS2"	"0"	"704.1"	"100.000"	"25.8493"	"5519"	"5519"	"5497"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"967.3"	""	"780.5"	""	"855.7"	""	"1253.4"	""	"1380.7"	"1445.3"	""	"539"	"35"	"34.000"	"27.000"	"0.00932306623241398"	"27"	"0.003059"	"0.03043"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIEVGGGR"	"[K].eIEVGGGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62083"	"40S ribosomal protein S7 OS=Rattus norvegicus OX=10116 GN=Rps7 PE=1 SV=1"	"P62083"	"40S ribosomal protein S7 OS=Rattus norvegicus OX=10116 GN=Rps7 PE=1 SV=1"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"523.29590"	"1045.58452"	"1045.58394"	"0.56"	"0.00029"	"7/60"	"7"	"60"	"5394431.81994629"	"HCD"	"MS2"	"2.003162"	"231.5"	"100.000"	"33.8226"	"8759"	"8759"	"8737"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"411.4"	""	"373.1"	""	"378.2"	""	"340.8"	"3.8"	"344.8"	"332.8"	""	"505"	"28"	"34.000"	"27.000"	"0.0399265129915772"	""	"0.0008629"	"0.01081"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQNVVSR"	"[R].nQNVVSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"523.30048"	"1045.59368"	"1045.59517"	"-1.43"	"-0.00075"	"5/60"	"5"	"60"	"1347300.66241455"	"HCD"	"MS2"	"0"	"93.0"	"100.000"	"21.2316"	"3670"	"3670"	"3643"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"147.5"	""	"132.6"	""	"113.7"	""	"152.4"	"1.3"	"165.7"	"167.5"	""	"553"	"28"	"34.000"	"27.000"	"0.0396912828322286"	"25"	"0.004606"	"0.04978"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQNVVSR"	"[R].nQNVVSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"523.30121"	"1045.59514"	"1045.59517"	"-0.03"	"-0.00002"	"5/60"	"5"	"60"	"1246294.94952393"	"HCD"	"MS2"	"0"	"83.3"	"100.000"	"21.3123"	"3685"	"3685"	"3658"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"116.6"	""	"113.3"	""	"119.7"	""	"149.6"	"2.4"	"147.4"	"140.0"	""	"564"	"31"	"34.000"	"27.000"	"0.0236183257559781"	"25"	"0.005309"	"0.05996"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIQTAVR"	"[R].eIQTAVR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"Q00729"	"Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"Q00715; Q00729"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"523.31342"	"1045.61955"	"1045.62032"	"-0.74"	"-0.00039"	"5/62"	"5"	"62"	"25896279.7672119"	"HCD"	"MS2"	"3.645483"	"595.6"	"64.888"	"32.0696"	"8054"	"8054"	"8041"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"471.3"	""	"438.6"	""	"479.6"	""	"1061.4"	""	"1618.5"	"1637.9"	""	"649"	"30"	"35.000"	"28.000"	"0.0325997823945339"	"25"	"0.005427"	"0.0623"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIQTAVR"	"[R].eIQTAVR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"Q00729"	"Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"Q00715; Q00729"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"523.31378"	"1045.62029"	"1045.62032"	"-0.04"	"-0.00002"	"5/62"	"5"	"62"	"22200809.6737061"	"HCD"	"MS2"	"2.290076"	"806.7"	"91.786"	"32.0887"	"8055"	"8055"	"8038"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"661.9"	""	"570.6"	""	"638.7"	""	"1431.4"	""	"2245.0"	"2174.3"	""	"631"	"30"	"34.000"	"28.000"	"0.0328851148973588"	"25"	"0.004542"	"0.04901"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLELGGK"	"[R].VTLELGGk.[S]"	"K8(TMT6plex)"	"3"	"5"	"P13601; Q63639; P11884"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2;Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"Q66HF8; P13601; Q63639; P51647; P11884"	"Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh1b1 PE=1 SV=1; Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3; Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"523.32556"	"1045.64385"	"1045.64548"	"-1.56"	"-0.00082"	"5/60"	"5"	"60"	"918980.511657715"	"HCD"	"MS2"	"50.24587"	"39.8"	"100.000"	"54.5462"	"17190"	"17190"	"17161"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.6"	""	"52.3"	""	"54.2"	""	"63.4"	""	"74.6"	"83.2"	""	"506"	"35"	"34.000"	"27.000"	"0.00772895041643525"	"22"	"0.00557"	"0.06298"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLELGGK"	"[R].VTLELGGk.[S]"	"K8(TMT6plex)"	"3"	"5"	"P13601; Q63639; P11884"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2;Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"Q66HF8; P13601; Q63639; P51647; P11884"	"Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh1b1 PE=1 SV=1; Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3; Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"523.32587"	"1045.64446"	"1045.64548"	"-0.98"	"-0.00051"	"5/60"	"5"	"60"	"885360.903930664"	"HCD"	"MS2"	"0"	"40.4"	"100.000"	"54.8356"	"17295"	"17295"	"17264"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.1"	""	"57.9"	""	"59.7"	""	"63.3"	"1.2"	"67.6"	"72.2"	""	"506"	"35"	"34.000"	"27.000"	"0.00813056116276"	"24"	"0.005309"	"0.05968"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALIAENFR"	"[M].aALIAENFR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q5RJQ8"	"Calcium homeostasis modulator protein 2 OS=Rattus norvegicus OX=10116 GN=Calhm2 PE=2 SV=1"	"Q5RJQ8"	"Calcium homeostasis modulator protein 2 OS=Rattus norvegicus OX=10116 GN=Calhm2 PE=2 SV=1"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"523.78448"	"1046.56169"	"1046.56292"	"-1.17"	"-0.00061"	"5/68"	"5"	"68"	"253528.182434082"	"HCD"	"MS2"	"48.81305"	"5.1"	"100.000"	"107.1767"	"37271"	"37271"	"37267"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.8"	""	"3.2"	""	"4.6"	""	"15.5"	""	"10.2"	"10.2"	"NoQuanLabels"	"522"	"39"	"34.000"	"27.000"	"0.00298978877717285"	"23"	"0.001546"	"0.0187"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALIAENFR"	"[M].aALIAENFR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q5RJQ8"	"Calcium homeostasis modulator protein 2 OS=Rattus norvegicus OX=10116 GN=Calhm2 PE=2 SV=1"	"Q5RJQ8"	"Calcium homeostasis modulator protein 2 OS=Rattus norvegicus OX=10116 GN=Calhm2 PE=2 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"523.78485"	"1046.56243"	"1046.56292"	"-0.47"	"-0.00025"	"5/68"	"5"	"68"	"265936.304626465"	"HCD"	"MS2"	"51.17696"	"5.4"	"100.000"	"107.1440"	"37334"	"37334"	"37325"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.4"	""	"4.3"	""	"5.8"	""	"13.9"	""	"11.7"	"10.9"	"NoQuanLabels"	"532"	"45"	"34.000"	"27.000"	"0.000928713239173039"	"21"	"0"	"0.001134"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SASVVSVISR"	"[M].sASVVSVISR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"0"	"2"	"2"	"0.8852"	"0.0000"	"1"	"1"	"1"	"523.79541"	"1046.58354"	"1046.58405"	"-0.48"	"-0.00025"	"8/88"	"8"	"88"	"1314384.12310791"	"HCD"	"MS2"	"6.770313"	"12.3"	"100.000"	"76.8917"	"26225"	"26225"	"26208"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.8"	""	"11.3"	""	"15.7"	""	"23.1"	""	"24.4"	"23.6"	"NoQuanLabels"	"707"	"61"	"35.000"	"28.000"	"2.83393195407545E-05"	"23"	"0"	"0.0005832"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SASVVSVISR"	"[M].sASVVSVISR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"523.79547"	"1046.58367"	"1046.58405"	"-0.37"	"-0.00019"	"8/88"	"8"	"88"	"562020.396789551"	"HCD"	"MS2"	"30.25952"	"10.7"	"100.000"	"77.4867"	"26466"	"26466"	"26445"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.7"	""	"15.4"	""	"16.9"	""	"19.4"	""	"17.3"	"18.1"	"NoQuanLabels"	"707"	"41"	"35.000"	"28.000"	"0.0025786322987499"	"24"	"0.001886"	"0.02115"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SASVVSVISR"	"[M].sASVVSVISR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"0"	"2"	"2"	"0.8594"	"0.0000"	"1"	"1"	"1"	"523.79547"	"1046.58367"	"1046.58405"	"-0.37"	"-0.00019"	"9/88"	"9"	"88"	"1203583.61798096"	"HCD"	"MS2"	"19.36955"	"14.0"	"100.000"	"76.7702"	"26185"	"26185"	"26163"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.7"	""	"17.6"	""	"19.2"	""	"26.6"	""	"27.2"	"26.4"	"NoQuanLabels"	"707"	"64"	"35.000"	"28.000"	"1.50103015855022E-05"	"25"	"0"	"0.0002475"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SASVVSVISR"	"[M].sASVVSVISR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"523.79553"	"1046.58379"	"1046.58405"	"-0.25"	"-0.00013"	"7/88"	"7"	"88"	"689297.059020996"	"HCD"	"MS2"	"23.65005"	"10.6"	"100.000"	"77.3656"	"26427"	"26427"	"26412"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.6"	""	"12.9"	""	"13.4"	""	"19.7"	""	"17.6"	"25.5"	"NoQuanLabels"	"707"	"42"	"35.000"	"28.000"	"0.00247394145586804"	"24"	"0.001374"	"0.0166"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SASVVSVISR"	"[M].sASVVSVISR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"523.79553"	"1046.58379"	"1046.58405"	"-0.25"	"-0.00013"	"8/88"	"8"	"88"	"3575691.19897461"	"HCD"	"MS2"	"1.853478"	"9.1"	"100.000"	"77.0608"	"26303"	"26303"	"26285"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.3"	""	"8.6"	""	"14.0"	""	"16.8"	""	"15.0"	"18.0"	"NoQuanLabels"	"707"	"84"	"35.000"	"28.000"	"1.35017299741956E-07"	"24"	"0"	"0.0001563"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SASVVSVISR"	"[M].sASVVSVISR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"523.79559"	"1046.58391"	"1046.58405"	"-0.13"	"-0.00007"	"8/88"	"8"	"88"	"3342178.56311035"	"HCD"	"MS2"	"3.581187"	"8.5"	"100.000"	"77.1799"	"26341"	"26341"	"26329"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.8"	""	"8.8"	""	"12.9"	""	"14.1"	""	"13.9"	"18.1"	"NoQuanLabels"	"682"	"80"	"35.000"	"28.000"	"3.08854816906285E-07"	"24"	"0"	"7.926E-05"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVDLEK"	"[M].aTVDLEk.[L]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"523.79944"	"1046.59160"	"1046.59311"	"-1.44"	"-0.00075"	"5/56"	"5"	"56"	"2354316.47363281"	"HCD"	"MS2"	"14.06403"	"92.5"	"100.000"	"66.0130"	"21818"	"21818"	"21796"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"150.6"	"5.0"	"111.4"	""	"121.4"	""	"152.6"	""	"169.3"	"172.0"	""	"610"	"45"	"34.000"	"27.000"	"0.000986960653635367"	""	"0.00379"	"0.0389"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVDLEK"	"[M].aTVDLEk.[L]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"2"	"2"	"0.5660"	"0.0000"	"1"	"1"	"1"	"523.79987"	"1046.59245"	"1046.59311"	"-0.62"	"-0.00033"	"6/56"	"6"	"56"	"5156242.53631592"	"HCD"	"MS2"	"3.151275"	"188.1"	"100.000"	"66.2968"	"21934"	"21934"	"21917"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"273.2"	"13.5"	"222.5"	""	"253.5"	""	"307.7"	""	"355.5"	"358.6"	""	"610"	"53"	"34.000"	"27.000"	"0.000149038969599564"	""	"0.001635"	"0.01997"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVDLEK"	"[M].aTVDLEk.[L]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"523.79993"	"1046.59258"	"1046.59311"	"-0.51"	"-0.00027"	"5/56"	"5"	"56"	"1797296.25366211"	"HCD"	"MS2"	"16.04551"	"75.2"	"100.000"	"66.0956"	"21836"	"21836"	"21816"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.3"	"3.9"	"101.7"	""	"115.5"	""	"124.3"	""	"131.2"	"136.9"	""	"610"	"40"	"34.000"	"27.000"	"0.00287276326939467"	""	"0.008777"	"0.1147"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVDLEK"	"[M].aTVDLEk.[L]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"2"	"2"	"0.6034"	"0.0000"	"1"	"1"	"1"	"523.80005"	"1046.59282"	"1046.59311"	"-0.27"	"-0.00014"	"6/56"	"6"	"56"	"4995613.14764404"	"HCD"	"MS2"	"2.800737"	"190.7"	"100.000"	"66.3928"	"21958"	"21958"	"21941"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"258.6"	"12.5"	"230.3"	""	"268.5"	""	"326.7"	""	"347.6"	"364.6"	""	"610"	"58"	"34.000"	"27.000"	"4.84506758322322E-05"	""	"0.0008629"	"0.0105"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDVVR"	"[K].sLEDVVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"523.80530"	"1046.60332"	"1046.60434"	"-0.98"	"-0.00051"	"9/54"	"9"	"54"	"5092623.82623291"	"HCD"	"MS2"	"12.68633"	"220.6"	"100.000"	"52.4305"	"16329"	"16329"	"16312"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"298.1"	""	"278.6"	""	"306.0"	""	"376.7"	""	"422.0"	"414.1"	""	"655"	"31"	"35.000"	"28.000"	"0.0281326928293017"	"27"	"0.003449"	"0.03384"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDVVR"	"[K].sLEDVVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"523.80542"	"1046.60356"	"1046.60434"	"-0.74"	"-0.00039"	"6/54"	"6"	"54"	"1634846.96459961"	"HCD"	"MS2"	"13.59897"	"69.6"	"100.000"	"52.7340"	"16452"	"16452"	"16434"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"102.0"	""	"91.0"	""	"91.6"	""	"116.2"	"0.7"	"129.6"	"128.0"	""	"656"	"22"	"35.000"	"28.000"	"0.188310199604004"	"25"	"0.00447"	"0.04813"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EASELLR"	"[R].eASELLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"523.80542"	"1046.60356"	"1046.60434"	"-0.74"	"-0.00039"	"9/54"	"9"	"54"	"14902895.5802612"	"HCD"	"MS2"	"1.730864"	"482.2"	"78.917"	"44.6088"	"13142"	"13142"	"13128"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"626.4"	""	"663.3"	""	"620.4"	""	"713.5"	""	"901.1"	"1054.7"	""	"656"	"28"	"35.000"	"28.000"	"0.047629261056878"	""	"0.007213"	"0.08316"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDVVR"	"[K].sLEDVVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"523.80566"	"1046.60405"	"1046.60434"	"-0.28"	"-0.00014"	"6/54"	"6"	"54"	"1310488.07696533"	"HCD"	"MS2"	"22.61583"	"57.0"	"100.000"	"53.0457"	"16568"	"16568"	"16547"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"79.7"	""	"67.8"	""	"76.7"	""	"93.5"	"0.7"	"110.3"	"112.1"	""	"656"	"16"	"35.000"	"28.000"	"0.768907051424935"	"19"	"0.005829"	"0.0651"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDVVR"	"[K].sLEDVVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"523.80573"	"1046.60417"	"1046.60434"	"-0.16"	"-0.00008"	"9/54"	"9"	"54"	"5083931.83050537"	"HCD"	"MS2"	"10.00127"	"220.7"	"100.000"	"52.7350"	"16441"	"16441"	"16423"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"301.0"	""	"268.2"	""	"302.2"	""	"384.5"	""	"419.5"	"421.0"	""	"633"	"31"	"35.000"	"28.000"	"0.0270628614628002"	"24"	"0.003449"	"0.034"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EASELLR"	"[R].eASELLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"523.80579"	"1046.60430"	"1046.60434"	"-0.04"	"-0.00002"	"9/54"	"9"	"54"	"14197416.9008789"	"HCD"	"MS2"	"1.609506"	"469.5"	"83.739"	"44.7436"	"13185"	"13185"	"13169"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"618.5"	""	"651.9"	""	"598.5"	""	"654.2"	""	"880.5"	"1059.2"	""	"633"	"30"	"35.000"	"28.000"	"0.0323872232056859"	""	"0.006685"	"0.07453"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGTVNIR"	"[K].aSGTVNIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"523.81085"	"1046.61443"	"1046.61557"	"-1.10"	"-0.00057"	"6/64"	"6"	"64"	"6520429.7824707"	"HCD"	"MS2"	"9.812998"	"302.0"	"100.000"	"29.1419"	"6869"	"6869"	"6848"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"451.4"	""	"397.9"	""	"448.9"	""	"454.5"	""	"564.9"	"543.5"	""	"550"	"27"	"34.000"	"27.000"	"0.0494689501660417"	"22"	"0.0006732"	"0.008855"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VANSGITR"	"[K].vANSGITR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"523.81091"	"1046.61455"	"1046.61557"	"-0.98"	"-0.00051"	"10/72"	"10"	"72"	"8689890.6428833"	"HCD"	"MS2"	"0"	"334.8"	"100.000"	"26.7850"	"5913"	"5913"	"5897"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"466.3"	""	"435.8"	""	"409.9"	""	"581.7"	"5.5"	"668.1"	"607.9"	""	"550"	"39"	"34.000"	"27.000"	"0.0033599490654534"	"23"	"0.0001301"	"0.003905"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGTVNIR"	"[K].aSGTVNIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.2400"	"0.0000"	"1"	"1"	"1"	"523.81110"	"1046.61492"	"1046.61557"	"-0.63"	"-0.00033"	"6/64"	"6"	"64"	"5363749.19567871"	"HCD"	"MS2"	"19.50222"	"265.2"	"100.000"	"29.1173"	"6846"	"6846"	"6827"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"369.4"	""	"371.0"	""	"383.8"	""	"420.2"	""	"490.6"	"482.0"	""	"564"	"25"	"34.000"	"27.000"	"0.0984575689649613"	""	"0.001211"	"0.0146"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VANSGITR"	"[K].vANSGITR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"523.81146"	"1046.61565"	"1046.61557"	"0.07"	"0.00004"	"11/72"	"11"	"72"	"7681990.19689941"	"HCD"	"MS2"	"3.248749"	"305.7"	"100.000"	"26.8338"	"5917"	"5917"	"5895"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"427.7"	""	"392.7"	""	"382.5"	""	"519.6"	"6.6"	"593.4"	"575.9"	""	"555"	"31"	"34.000"	"27.000"	"0.0221443525716864"	"21"	"0.0003538"	"0.006651"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVTTGQR"	"[K].gVVTTGQR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"523.81567"	"1046.62407"	"1046.61557"	"8.12"	"0.00425"	"6/60"	"6"	"60"	"3862522.94348145"	"HCD"	"MS2"	"0"	"246.2"	"100.000"	"23.2617"	"4496"	"4496"	"4467"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"289.3"	""	"223.1"	""	"252.4"	""	"475.2"	""	"556.0"	"547.7"	""	"658"	"11"	"35.000"	"28.000"	"2.45581641516912"	"19"	"0.008052"	"0.09781"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGSVGQNR"	"[R].tGSVGQNR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"524.29034"	"1047.57341"	"1047.57444"	"-0.98"	"-0.00051"	"7/64"	"7"	"64"	"786574.806335449"	"HCD"	"MS2"	"0"	"58.6"	"100.000"	"19.6551"	"3045"	"3045"	"3029"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"100.5"	""	"83.8"	""	"97.1"	""	"77.6"	"2.3"	"98.2"	"94.9"	""	"584"	"30"	"34.000"	"27.000"	"0.03107297613215"	"21"	"0.001211"	"0.01479"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGSVGQNR"	"[R].tGSVGQNR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"524.29144"	"1047.57561"	"1047.57444"	"1.12"	"0.00059"	"6/64"	"6"	"64"	"2334559.9296875"	"HCD"	"MS2"	"0"	"136.9"	"100.000"	"19.5696"	"3017"	"3017"	"2992"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"244.9"	""	"203.1"	""	"224.4"	""	"184.3"	"2.1"	"222.8"	"212.0"	""	"591"	"31"	"34.000"	"27.000"	"0.0260349941973868"	"23"	"0.001374"	"0.01804"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDSLNR"	"[K].tIDSLNR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.3182"	"0.0000"	"1"	"1"	"1"	"524.30316"	"1047.59905"	"1047.59959"	"-0.52"	"-0.00027"	"5/56"	"5"	"56"	"8609034.31396484"	"HCD"	"MS2"	"38.02303"	"406.1"	"100.000"	"36.4816"	"9841"	"9841"	"9825"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"587.2"	""	"518.7"	""	"537.9"	""	"705.2"	""	"712.5"	"785.5"	""	"675"	"22"	"35.000"	"28.000"	"0.22144902737723"	""	"0.007627"	"0.09347"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDSLNR"	"[K].tIDSLNR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.3043"	"0.0000"	"1"	"1"	"1"	"524.30365"	"1047.60002"	"1047.59959"	"0.41"	"0.00022"	"5/56"	"5"	"56"	"8218365.86126709"	"HCD"	"MS2"	"48.75866"	"401.3"	"100.000"	"36.6482"	"9903"	"9903"	"9880"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"612.5"	""	"519.9"	""	"536.5"	""	"684.3"	"5.1"	"699.3"	"742.5"	""	"665"	"23"	"35.000"	"28.000"	"0.162476909481492"	""	"0.007602"	"0.0906"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDSLNR"	"[K].tIDSLNR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"524.30432"	"1047.60137"	"1047.59959"	"1.70"	"0.00089"	"5/56"	"5"	"56"	"71165051.9558105"	"HCD"	"MS2"	"5.056381"	"584.8"	"16.313"	"36.9311"	"10019"	"10019"	"10004"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"868.9"	""	"744.8"	""	"774.3"	""	"964.0"	""	"1077.0"	"1117.1"	""	"664"	"25"	"35.000"	"28.000"	"0.0964135521282198"	""	"0.008187"	"0.09983"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFK.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"524.30499"	"1047.60271"	"1047.60361"	"-0.86"	"-0.00045"	"4/52"	"4"	"52"	"4062413.59820557"	"HCD"	"MS2"	"5.379431"	"109.7"	"100.000"	"53.8582"	"16900"	"16900"	"16880"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"135.3"	""	"122.3"	""	"123.2"	""	"193.1"	"3.4"	"216.0"	"249.2"	""	"665"	"23"	"35.000"	"28.000"	"0.167799881439873"	"26"	"0.006769"	"0.07913"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].VDPVNFk.[F]"	"K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8679"	"0.0000"	"1"	"1"	"1"	"524.30505"	"1047.60283"	"1047.60361"	"-0.75"	"-0.00039"	"6/52"	"6"	"52"	"21124923.7618408"	"HCD"	"MS2"	"0"	"257.0"	"49.225"	"50.5778"	"15573"	"15573"	"15558"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"250.5"	""	"271.9"	""	"286.4"	""	"544.6"	""	"556.7"	"535.3"	""	"646"	"53"	"35.000"	"28.000"	"0.000156748185552365"	"23"	"0.006769"	"0.07879"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].VDPVNFk.[F]"	"K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8302"	"0.0000"	"1"	"1"	"1"	"524.30511"	"1047.60295"	"1047.60361"	"-0.63"	"-0.00033"	"6/52"	"6"	"52"	"5852243.17541504"	"HCD"	"MS2"	"15.772"	"160.8"	"100.000"	"50.6340"	"15585"	"15585"	"15566"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"183.6"	""	"180.0"	""	"189.9"	""	"328.5"	""	"337.6"	"311.0"	""	"646"	"53"	"35.000"	"28.000"	"0.00016300559911302"	"25"	"0.004867"	"0.05185"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFK.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"524.30524"	"1047.60320"	"1047.60361"	"-0.40"	"-0.00021"	"5/52"	"5"	"52"	"2920366.22851563"	"HCD"	"MS2"	"7.468146"	"77.7"	"100.000"	"53.2727"	"16672"	"16672"	"16653"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"85.3"	""	"92.7"	""	"91.7"	""	"140.8"	"5.2"	"163.8"	"158.7"	""	"646"	"37"	"35.000"	"28.000"	"0.00682656959867237"	""	"0.003449"	"0.03391"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].VDPVNFk.[F]"	"K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"524.30536"	"1047.60344"	"1047.60361"	"-0.16"	"-0.00009"	"6/52"	"6"	"52"	"5557122.48944092"	"HCD"	"MS2"	"24.38148"	"158.7"	"100.000"	"50.2902"	"15456"	"15456"	"15438"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"163.2"	""	"178.2"	""	"187.8"	""	"338.5"	"0.4"	"334.1"	"304.9"	""	"646"	"40"	"35.000"	"28.000"	"0.00326740163725947"	"24"	"0.008522"	"0.1048"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFK.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"524.30542"	"1047.60356"	"1047.60361"	"-0.05"	"-0.00002"	"5/52"	"5"	"52"	"3465729.77697754"	"HCD"	"MS2"	"0"	"87.2"	"100.000"	"53.5542"	"16776"	"16776"	"16754"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.9"	""	"105.6"	""	"98.5"	""	"163.4"	"6.0"	"172.6"	"176.9"	""	"646"	"33"	"35.000"	"28.000"	"0.0169903577044198"	"28"	"0.003449"	"0.03302"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNTNPSR"	"[R].mNTNPSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"524.77356"	"1048.53984"	"1048.54069"	"-0.81"	"-0.00043"	"5/64"	"5"	"64"	"9319173.67810059"	"HCD"	"MS2"	"48.39583"	"491.4"	"100.000"	"21.9125"	"3945"	"3945"	"3926"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"786.1"	""	"611.5"	""	"632.5"	""	"615.9"	""	"988.4"	"1030.2"	""	"486"	"17"	"33.000"	"26.000"	"0.541509741272684"	"19"	"0.00912"	"0.1192"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNTNPSR"	"[R].mNTNPSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"524.77380"	"1048.54033"	"1048.54069"	"-0.35"	"-0.00018"	"5/64"	"5"	"64"	"9636647.83856201"	"HCD"	"MS2"	"38.39364"	"518.2"	"100.000"	"21.9586"	"3946"	"3946"	"3930"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"797.4"	""	"643.4"	""	"648.2"	""	"677.7"	""	"1045.6"	"1112.2"	""	"490"	"22"	"33.000"	"26.000"	"0.140658533240795"	"22"	"0.006834"	"0.07965"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSLDELR"	"[K].sSLDELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LRS8"	"CD2-associated protein OS=Rattus norvegicus OX=10116 GN=Cd2ap PE=1 SV=2"	"F1LRS8"	"CD2-associated protein OS=Rattus norvegicus OX=10116 GN=Cd2ap PE=1 SV=2"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"524.79498"	"1048.58269"	"1048.58360"	"-0.87"	"-0.00046"	"6/56"	"6"	"56"	"3164336.32727051"	"HCD"	"MS2"	"38.65993"	"158.9"	"100.000"	"43.1074"	"12536"	"12536"	"12515"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"212.9"	""	"186.7"	""	"191.1"	""	"265.5"	""	"336.7"	"316.8"	""	"615"	"15"	"34.000"	"27.000"	"0.874671790540234"	"25"	"0.006769"	"0.07769"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SSLDELR"	"[K].sSLDELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LRS8"	"CD2-associated protein OS=Rattus norvegicus OX=10116 GN=Cd2ap PE=1 SV=2"	"F1LRS8"	"CD2-associated protein OS=Rattus norvegicus OX=10116 GN=Cd2ap PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"3"	"3"	"5"	"524.79529"	"1048.58330"	"1048.58360"	"-0.29"	"-0.00015"	"6/56"	"6"	"56"	"2918106.96234131"	"HCD"	"MS2"	"37.17136"	"148.7"	"100.000"	"43.2020"	"12564"	"12564"	"12540"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"205.9"	""	"162.8"	""	"182.5"	""	"257.9"	"1.7"	"319.7"	"280.9"	""	"629"	"17"	"34.000"	"27.000"	"0.642126583598568"	"23"	"0.004942"	"0.05417"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEVSER"	"[K].sLEVSER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12369"	"cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"P12369"	"cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"524.79541"	"1048.58354"	"1048.58360"	"-0.06"	"-0.00003"	"4/58"	"4"	"58"	"6608585.35089111"	"HCD"	"MS2"	"33.09562"	"381.1"	"100.000"	"32.9500"	"8405"	"8405"	"8385"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"578.5"	""	"463.7"	""	"487.0"	""	"648.5"	""	"679.1"	"755.6"	""	"617"	"19"	"34.000"	"27.000"	"0.375193381199404"	"25"	"0.008777"	"0.1137"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISGAGMER"	"[R].iSGAGMER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"525.28394"	"1049.56059"	"1049.56110"	"-0.48"	"-0.00025"	"7/66"	"7"	"66"	"4665474.19171143"	"HCD"	"MS2"	"57.44526"	"309.7"	"100.000"	"32.5933"	"8267"	"8267"	"8243"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"441.1"	""	"373.1"	""	"373.5"	""	"537.9"	""	"583.0"	"630.5"	""	"536"	"13"	"34.000"	"27.000"	"1.25641986414931"	"19"	"0.003581"	"0.03714"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SATADLSR"	"[K].sATADLSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"525.29242"	"1049.57756"	"1049.57885"	"-1.23"	"-0.00065"	"6/68"	"6"	"68"	"4653779.40551758"	"HCD"	"MS2"	"49.47371"	"188.1"	"100.000"	"26.2804"	"5692"	"5692"	"5677"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"224.0"	""	"200.8"	""	"217.8"	""	"366.7"	"0.5"	"405.6"	"375.7"	""	"599"	"27"	"34.000"	"27.000"	"0.0552582118044253"	"27"	"0.0003538"	"0.006635"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SATADLSR"	"[K].sATADLSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"525.29254"	"1049.57781"	"1049.57885"	"-1.00"	"-0.00052"	"6/68"	"6"	"68"	"5488485.72143555"	"HCD"	"MS2"	"37.13646"	"312.8"	"100.000"	"26.2228"	"5685"	"5685"	"5667"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"320.6"	""	"328.0"	""	"353.0"	""	"684.5"	""	"699.6"	"589.9"	""	"599"	"29"	"34.000"	"27.000"	"0.0352692989069482"	"25"	"0.0003538"	"0.006751"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADFQR"	"[R].lAADFQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"B2GV24"	"E3 UFM1-protein ligase 1 OS=Rattus norvegicus OX=10116 GN=Ufl1 PE=1 SV=1"	"B2GV24"	"E3 UFM1-protein ligase 1 OS=Rattus norvegicus OX=10116 GN=Ufl1 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"525.30042"	"1049.59355"	"1049.59411"	"-0.53"	"-0.00028"	"6/50"	"6"	"50"	"1600208.64233398"	"HCD"	"MS2"	"27.17015"	"78.5"	"100.000"	"49.8138"	"15262"	"15262"	"15238"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.7"	""	"93.9"	""	"101.5"	""	"133.7"	""	"156.6"	"163.8"	""	"555"	"16"	"34.000"	"27.000"	"0.662617631008407"	"24"	"0.004022"	"0.04313"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADFQR"	"[R].lAADFQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"B2GV24"	"E3 UFM1-protein ligase 1 OS=Rattus norvegicus OX=10116 GN=Ufl1 PE=1 SV=1"	"B2GV24"	"E3 UFM1-protein ligase 1 OS=Rattus norvegicus OX=10116 GN=Ufl1 PE=1 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"525.30048"	"1049.59368"	"1049.59411"	"-0.41"	"-0.00022"	"9/50"	"9"	"50"	"1430769.41601563"	"HCD"	"MS2"	"18.70205"	"70.9"	"100.000"	"50.1324"	"15380"	"15380"	"15358"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"98.4"	""	"92.6"	""	"97.0"	""	"111.9"	""	"137.6"	"135.4"	""	"555"	"22"	"34.000"	"27.000"	"0.175898844873797"	"23"	"0.005617"	"0.06415"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAELDIN"	"[K].fAELDIN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2N0"	"CTP synthase 2 OS=Rattus norvegicus OX=10116 GN=Ctps2 PE=1 SV=1"	"Q5U2N0"	"CTP synthase 2 OS=Rattus norvegicus OX=10116 GN=Ctps2 PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"525.78656"	"1050.56584"	"1050.56689"	"-1.00"	"-0.00052"	"5/52"	"5"	"52"	"186790.254516602"	"HCD"	"MS2"	"11.87085"	"6.1"	"100.000"	"100.5812"	"35207"	"35207"	"35200"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.7"	""	"6.2"	""	"9.0"	""	"12.4"	""	"9.6"	"10.0"	""	"588"	"23"	"34.000"	"27.000"	"0.155721052504147"	"23"	"0.003967"	"0.04141"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAELDIN"	"[K].fAELDIN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2N0"	"CTP synthase 2 OS=Rattus norvegicus OX=10116 GN=Ctps2 PE=1 SV=1"	"Q5U2N0"	"CTP synthase 2 OS=Rattus norvegicus OX=10116 GN=Ctps2 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"525.78668"	"1050.56609"	"1050.56689"	"-0.77"	"-0.00040"	"4/52"	"4"	"52"	"186055.435119629"	"HCD"	"MS2"	"23.69527"	"6.6"	"100.000"	"100.6181"	"35175"	"35175"	"35169"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.1"	""	"8.3"	""	"8.0"	""	"13.3"	""	"11.3"	"9.6"	""	"581"	"24"	"34.000"	"27.000"	"0.115384145120872"	"24"	"0.00413"	"0.04573"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAELDIN"	"[K].fAELDIN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2N0"	"CTP synthase 2 OS=Rattus norvegicus OX=10116 GN=Ctps2 PE=1 SV=1"	"Q5U2N0"	"CTP synthase 2 OS=Rattus norvegicus OX=10116 GN=Ctps2 PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"525.78705"	"1050.56682"	"1050.56689"	"-0.07"	"-0.00004"	"4/52"	"4"	"52"	"232047.626342773"	"HCD"	"MS2"	"38.18275"	"5.9"	"100.000"	"100.8434"	"35295"	"35295"	"35288"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.6"	""	"7.0"	""	"7.0"	""	"10.4"	""	"12.4"	"10.8"	""	"563"	"21"	"34.000"	"27.000"	"0.241812306303769"	"21"	"0.004205"	"0.04613"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGEEIAR"	"[K].fGEEIAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"525.79205"	"1050.57683"	"1050.57813"	"-1.23"	"-0.00065"	"5/50"	"5"	"50"	"4908483.32293701"	"HCD"	"MS2"	"4.75182"	"222.1"	"100.000"	"47.2317"	"14209"	"14209"	"14190"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"291.3"	""	"265.6"	""	"327.7"	""	"357.7"	""	"409.0"	"457.2"	""	"543"	"22"	"34.000"	"27.000"	"0.161722271968126"	"20"	"0.005874"	"0.06657"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGEEIAR"	"[K].fGEEIAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"525.79279"	"1050.57829"	"1050.57813"	"0.16"	"0.00008"	"9/50"	"9"	"50"	"4550593.76397705"	"HCD"	"MS2"	"7.336153"	"210.0"	"100.000"	"47.4634"	"14292"	"14292"	"14273"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"294.5"	""	"253.8"	""	"287.2"	""	"336.8"	""	"369.9"	"454.9"	""	"541"	"26"	"34.000"	"27.000"	"0.0723048233543425"	"20"	"0.004022"	"0.04365"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NAEVFLK"	"[R].nAEVFLk.[Y]"	"N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P97924"	"Kalirin OS=Rattus norvegicus OX=10116 GN=Kalrn PE=1 SV=3"	"P97924"	"Kalirin OS=Rattus norvegicus OX=10116 GN=Kalrn PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"525.80469"	"1050.60210"	"1050.60328"	"-1.12"	"-0.00059"	"4/60"	"4"	"60"	"236780.715270996"	"HCD"	"MS2"	"15.0444"	"11.2"	"100.000"	"87.9729"	"30635"	"30635"	"30619"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.1"	""	"15.1"	""	"15.8"	""	"19.4"	""	"16.9"	"21.1"	""	"425"	"23"	"33.000"	"26.000"	"0.100082681859353"	"25"	"0.008901"	"0.1156"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NAEVFLK"	"[R].nAEVFLk.[Y]"	"N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P97924"	"Kalirin OS=Rattus norvegicus OX=10116 GN=Kalrn PE=1 SV=3"	"P97924"	"Kalirin OS=Rattus norvegicus OX=10116 GN=Kalrn PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"525.80518"	"1050.60307"	"1050.60328"	"-0.19"	"-0.00010"	"4/60"	"4"	"60"	"206144.356140137"	"HCD"	"MS2"	"24.69771"	"8.7"	"100.000"	"88.0096"	"30655"	"30655"	"30644"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.1"	""	"12.6"	""	"11.3"	""	"13.8"	""	"13.8"	"18.5"	""	"388"	"22"	"32.000"	"25.000"	"0.111122430011251"	"24"	"0.008777"	"0.1132"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NAEVFLK"	"[R].nAEVFLk.[Y]"	"N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P97924"	"Kalirin OS=Rattus norvegicus OX=10116 GN=Kalrn PE=1 SV=3"	"P97924"	"Kalirin OS=Rattus norvegicus OX=10116 GN=Kalrn PE=1 SV=3"	"0"	"2"	"2"	"0.0417"	"0.0000"	"1"	"1"	"1"	"525.80536"	"1050.60344"	"1050.60328"	"0.16"	"0.00008"	"4/60"	"4"	"60"	"344743.369262695"	"HCD"	"MS2"	"41.88916"	"14.7"	"100.000"	"87.4147"	"30415"	"30415"	"30392"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.0"	""	"21.2"	""	"20.3"	""	"26.3"	""	"18.2"	"25.9"	""	"388"	"24"	"32.000"	"25.000"	"0.080872660393245"	"25"	"0.005921"	"0.06792"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYVGVVR"	"[K].eYVGVVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P40615"	"H/ACA ribonucleoprotein complex subunit DKC1 OS=Rattus norvegicus OX=10116 GN=Dkc1 PE=1 SV=4"	"P40615"	"H/ACA ribonucleoprotein complex subunit DKC1 OS=Rattus norvegicus OX=10116 GN=Dkc1 PE=1 SV=4"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"525.81018"	"1050.61308"	"1050.61451"	"-1.36"	"-0.00071"	"4/48"	"4"	"48"	"2052099.5949707"	"HCD"	"MS2"	"48.1057"	"103.8"	"100.000"	"42.2517"	"12187"	"12187"	"12156"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"157.2"	""	"146.1"	""	"132.8"	""	"145.6"	""	"202.8"	"200.9"	""	"349"	"21"	"32.000"	"25.000"	"0.153743028339899"	"24"	"0.008522"	"0.1057"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYVGVVR"	"[K].eYVGVVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P40615"	"H/ACA ribonucleoprotein complex subunit DKC1 OS=Rattus norvegicus OX=10116 GN=Dkc1 PE=1 SV=4"	"P40615"	"H/ACA ribonucleoprotein complex subunit DKC1 OS=Rattus norvegicus OX=10116 GN=Dkc1 PE=1 SV=4"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"525.81110"	"1050.61492"	"1050.61451"	"0.39"	"0.00020"	"5/48"	"5"	"48"	"1849457.97058105"	"HCD"	"MS2"	"53.88356"	"95.6"	"100.000"	"42.3418"	"12213"	"12213"	"12187"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"143.4"	""	"129.7"	""	"130.8"	""	"137.1"	""	"173.9"	"191.5"	""	"346"	"16"	"32.000"	"25.000"	"0.40836273434024"	"19"	"0.007935"	"0.09738"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGVQTDR"	"[K].fGVQTDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HL2"	"Src substrate cortactin OS=Rattus norvegicus OX=10116 GN=Cttn PE=1 SV=1"	"Q66HL2"	"Src substrate cortactin OS=Rattus norvegicus OX=10116 GN=Cttn PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"526.28857"	"1051.56987"	"1051.57337"	"-3.33"	"-0.00175"	"6/56"	"6"	"56"	"2302355.03692627"	"HCD"	"MS2"	"17.97973"	"124.9"	"100.000"	"37.5395"	"10265"	"10265"	"10254"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"146.5"	"2.9"	"145.1"	""	"145.3"	""	"234.1"	""	"263.1"	"250.3"	""	"391"	"16"	"32.000"	"25.000"	"0.483222070350653"	"18"	"0.006685"	"0.0749"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGVQTDR"	"[K].fGVQTDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HL2"	"Src substrate cortactin OS=Rattus norvegicus OX=10116 GN=Cttn PE=1 SV=1"	"Q66HL2"	"Src substrate cortactin OS=Rattus norvegicus OX=10116 GN=Cttn PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"526.28931"	"1051.57134"	"1051.57337"	"-1.94"	"-0.00102"	"6/56"	"6"	"56"	"2498597.23358154"	"HCD"	"MS2"	"0"	"131.0"	"100.000"	"37.4443"	"10231"	"10231"	"10220"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"148.0"	""	"152.1"	""	"142.5"	""	"268.8"	""	"285.7"	"249.3"	""	"390"	"17"	"32.000"	"25.000"	"0.399056704161311"	"19"	"0.007627"	"0.09132"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APTQSYR"	"[K].aPTQSYR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QQV3"	"Protein FAM162A OS=Rattus norvegicus OX=10116 GN=Fam162a PE=2 SV=1"	"Q4QQV3"	"Protein FAM162A OS=Rattus norvegicus OX=10116 GN=Fam162a PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"526.28998"	"1051.57268"	"1051.57337"	"-0.66"	"-0.00035"	"6/58"	"6"	"58"	"4167969.55114746"	"HCD"	"MS2"	"5.780622"	"238.3"	"100.000"	"24.0507"	"4794"	"4794"	"4773"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"258.6"	""	"286.8"	""	"314.9"	""	"432.7"	""	"491.5"	"482.1"	""	"395"	"14"	"32.000"	"25.000"	"0.712142819967743"	"16"	"0.008777"	"0.1129"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEQGLR"	"[R].yGEQGLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O35824"	"DnaJ homolog subfamily A member 2 OS=Rattus norvegicus OX=10116 GN=Dnaja2 PE=1 SV=1"	"O35824"	"DnaJ homolog subfamily A member 2 OS=Rattus norvegicus OX=10116 GN=Dnaja2 PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"526.29028"	"1051.57329"	"1051.57337"	"-0.08"	"-0.00004"	"6/54"	"6"	"54"	"4331879.2958374"	"HCD"	"MS2"	"15.32101"	"239.7"	"100.000"	"30.9628"	"7594"	"7594"	"7578"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"325.7"	""	"271.0"	""	"314.9"	""	"414.2"	""	"461.5"	"488.3"	""	"397"	"17"	"32.000"	"25.000"	"0.425363784322332"	"21"	"0.008641"	"0.1067"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDAHPPR"	"[K].mDAHPPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"526.77808"	"1052.54888"	"1052.55086"	"-1.89"	"-0.00099"	"6/48"	"6"	"48"	"2311445.30072021"	"HCD"	"MS2"	"26.11849"	"155.8"	"100.000"	"22.3349"	"4116"	"4116"	"4097"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"215.1"	""	"192.2"	""	"189.0"	""	"232.4"	""	"329.0"	"321.4"	""	"369"	"15"	"32.000"	"25.000"	"0.60255455035796"	"15"	"0.008437"	"0.1015"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDAHPPR"	"[K].mDAHPPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"3"	"3"	"0.6400"	"0.0000"	"1"	"1"	"1"	"351.52151"	"1052.54999"	"1052.55086"	"-0.83"	"-0.00029"	"7/48"	"7"	"48"	"14496019.4099731"	"HCD"	"MS2"	"17.14918"	"449.2"	"92.109"	"22.2247"	"4072"	"4072"	"4051"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"602.9"	""	"653.2"	""	"564.3"	""	"547.7"	""	"962.0"	"936.4"	""	"369"	"25"	"32.000"	"25.000"	"0.0592920369379139"	"23"	"0.004942"	"0.05546"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDAHPPR"	"[K].mDAHPPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"351.52176"	"1052.55072"	"1052.55086"	"-0.13"	"-0.00005"	"7/48"	"7"	"48"	"14266267.4761963"	"HCD"	"MS2"	"16.38842"	"511.4"	"100.000"	"22.2523"	"4066"	"4066"	"4044"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"675.2"	""	"764.0"	""	"607.2"	""	"615.1"	""	"1112.1"	"1086.0"	""	"362"	"21"	"32.000"	"25.000"	"0.151244146299856"	"20"	"0.002056"	"0.02258"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSFER"	"[K].aLTSFER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"526.80017"	"1052.59307"	"1052.59378"	"-0.67"	"-0.00036"	"5/54"	"5"	"54"	"2133668.8225708"	"HCD"	"MS2"	"16.84643"	"108.7"	"100.000"	"50.1740"	"15397"	"15397"	"15374"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"144.0"	""	"150.3"	""	"151.9"	""	"181.9"	""	"207.0"	"197.4"	""	"335"	"29"	"32.000"	"25.000"	"0.0189240815707694"	"24"	"0.002147"	"0.02281"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSFER"	"[K].aLTSFER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"526.80042"	"1052.59355"	"1052.59378"	"-0.21"	"-0.00011"	"6/54"	"6"	"54"	"2617310.7487793"	"HCD"	"MS2"	"9.068593"	"121.9"	"100.000"	"49.8853"	"15291"	"15291"	"15270"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"166.1"	""	"150.1"	""	"171.5"	""	"219.6"	"1.2"	"216.9"	"229.9"	""	"335"	"19"	"32.000"	"25.000"	"0.201843520012276"	"20"	"0.003967"	"0.04141"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDIYTR"	"[R].gVDIYTR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6PTT0; Q6AYS7"	"Aminoacylase-1B OS=Rattus norvegicus OX=10116 GN=Acy1b PE=1 SV=1; Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"526.80060"	"1052.59392"	"1052.59378"	"0.14"	"0.00007"	"10/54"	"10"	"54"	"3153090.64343262"	"HCD"	"MS2"	"6.715188"	"149.3"	"100.000"	"44.3747"	"13035"	"13035"	"13017"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"178.5"	""	"183.8"	""	"185.5"	""	"290.5"	""	"285.7"	"293.6"	""	"333"	"24"	"32.000"	"25.000"	"0.0676728143060079"	"23"	"0.006769"	"0.07785"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVYIDAR"	"[R].sVYIDAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6U6G5"	"Zinc finger CCCH domain-containing protein 15 OS=Rattus norvegicus OX=10116 GN=Zc3h15 PE=1 SV=1"	"Q6U6G5"	"Zinc finger CCCH domain-containing protein 15 OS=Rattus norvegicus OX=10116 GN=Zc3h15 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"526.80127"	"1052.59526"	"1052.59378"	"1.41"	"0.00074"	"4/56"	"4"	"56"	"1180834.51208496"	"HCD"	"MS2"	"24.71808"	"70.2"	"100.000"	"42.1973"	"12154"	"12154"	"12129"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.1"	""	"102.5"	""	"103.3"	""	"106.6"	""	"126.8"	"139.7"	""	"320"	"24"	"32.000"	"25.000"	"0.0644347254920734"	"17"	"0.007413"	"0.08808"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVITIYS"	"[R].eVITIYS.[-]"	"N-Term(TMT6plex)"	"1"	"3"	"Q63633"	"Solute carrier family 12 member 5 OS=Rattus norvegicus OX=10116 GN=Slc12a5 PE=1 SV=2"	"Q5RK27; Q63633; Q63632"	"Solute carrier family 12 member 7 OS=Rattus norvegicus OX=10116 GN=Slc12a7 PE=2 SV=2; Solute carrier family 12 member 5 OS=Rattus norvegicus OX=10116 GN=Slc12a5 PE=1 SV=2; Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"527.30438"	"1053.60149"	"1053.60294"	"-1.38"	"-0.00073"	"4/62"	"4"	"62"	"363980.292663574"	"HCD"	"MS2"	"12.61144"	"7.8"	"100.000"	"86.8445"	"30193"	"30193"	"30169"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.4"	""	"9.7"	""	"10.9"	""	"16.7"	""	"11.5"	"15.2"	""	"233"	"20"	"30.000"	"23.000"	"0.128625159218591"	"20"	"0.007213"	"0.08283"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVITIYS"	"[R].eVITIYS.[-]"	"N-Term(TMT6plex)"	"1"	"3"	"Q63633"	"Solute carrier family 12 member 5 OS=Rattus norvegicus OX=10116 GN=Slc12a5 PE=1 SV=2"	"Q5RK27; Q63633; Q63632"	"Solute carrier family 12 member 7 OS=Rattus norvegicus OX=10116 GN=Slc12a7 PE=2 SV=2; Solute carrier family 12 member 5 OS=Rattus norvegicus OX=10116 GN=Slc12a5 PE=1 SV=2; Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.30457"	"1053.60185"	"1053.60294"	"-1.03"	"-0.00054"	"5/62"	"5"	"62"	"194299.690307617"	"HCD"	"MS2"	"19.82157"	"8.2"	"100.000"	"87.1849"	"30332"	"30332"	"30321"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.9"	""	"11.5"	""	"13.1"	""	"11.3"	""	"18.4"	"16.7"	""	"233"	"14"	"30.000"	"23.000"	"0.422013093155453"	"13"	"0.009363"	"0.1217"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVITIYS"	"[R].eVITIYS.[-]"	"N-Term(TMT6plex)"	"1"	"3"	"Q63633"	"Solute carrier family 12 member 5 OS=Rattus norvegicus OX=10116 GN=Slc12a5 PE=1 SV=2"	"Q5RK27; Q63633; Q63632"	"Solute carrier family 12 member 7 OS=Rattus norvegicus OX=10116 GN=Slc12a7 PE=2 SV=2; Solute carrier family 12 member 5 OS=Rattus norvegicus OX=10116 GN=Slc12a5 PE=1 SV=2; Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.30463"	"1053.60198"	"1053.60294"	"-0.92"	"-0.00048"	"4/62"	"4"	"62"	"317579.146240234"	"HCD"	"MS2"	"28.4174"	"7.8"	"100.000"	"86.8583"	"30202"	"30202"	"30182"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.4"	""	"8.5"	""	"14.0"	""	"8.9"	""	"13.6"	"18.8"	""	"233"	"19"	"30.000"	"23.000"	"0.161185483150212"	"14"	"0.005617"	"0.06433"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVITIYS"	"[R].eVITIYS.[-]"	"N-Term(TMT6plex)"	"1"	"3"	"Q63633"	"Solute carrier family 12 member 5 OS=Rattus norvegicus OX=10116 GN=Slc12a5 PE=1 SV=2"	"Q5RK27; Q63633; Q63632"	"Solute carrier family 12 member 7 OS=Rattus norvegicus OX=10116 GN=Slc12a7 PE=2 SV=2; Solute carrier family 12 member 5 OS=Rattus norvegicus OX=10116 GN=Slc12a5 PE=1 SV=2; Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.30493"	"1053.60259"	"1053.60294"	"-0.34"	"-0.00018"	"4/62"	"4"	"62"	"222628.239685059"	"HCD"	"MS2"	"33.38427"	"8.5"	"100.000"	"87.1205"	"30300"	"30300"	"30287"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.6"	""	"12.5"	""	"10.2"	""	"12.1"	""	"22.5"	"15.9"	""	"227"	"16"	"30.000"	"23.000"	"0.261815805919728"	"14"	"0.007872"	"0.09671"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGIYETR"	"[R].sGIYETR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"527.78998"	"1054.57268"	"1054.57304"	"-0.34"	"-0.00018"	"5/58"	"5"	"58"	"4457682.29760742"	"HCD"	"MS2"	"0"	"256.4"	"100.000"	"29.8563"	"7158"	"7158"	"7139"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"365.9"	""	"333.4"	""	"366.3"	""	"370.3"	"3.9"	"466.7"	"524.1"	""	"332"	"21"	"32.000"	"25.000"	"0.135552673645526"	"23"	"0.004942"	"0.05466"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGIYETR"	"[R].sGIYETR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"527.79016"	"1054.57305"	"1054.57304"	"0.01"	"0.00000"	"5/58"	"5"	"58"	"5068379.08508301"	"HCD"	"MS2"	"13.16158"	"236.9"	"100.000"	"29.6131"	"7048"	"7048"	"7023"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"350.3"	""	"287.4"	""	"288.5"	""	"382.3"	"1.1"	"436.2"	"500.4"	""	"332"	"24"	"32.000"	"25.000"	"0.0591708881487566"	"25"	"0.003111"	"0.03136"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGIYETR"	"[R].sGIYETR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"527.79028"	"1054.57329"	"1054.57304"	"0.24"	"0.00012"	"5/58"	"5"	"58"	"3580700.20544434"	"HCD"	"MS2"	"18.46822"	"176.6"	"100.000"	"29.5553"	"7036"	"7036"	"7019"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"241.5"	""	"215.5"	""	"211.8"	""	"284.0"	"0.3"	"327.6"	"395.5"	""	"332"	"24"	"32.000"	"25.000"	"0.0616748480301307"	"25"	"0.003581"	"0.03729"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMNYSAK"	"[M].aMNYSAk.[D]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"Q6AY41"	"Cell cycle control protein 50A OS=Rattus norvegicus OX=10116 GN=Tmem30a PE=1 SV=1"	"Q6AY41"	"Cell cycle control protein 50A OS=Rattus norvegicus OX=10116 GN=Tmem30a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"528.27289"	"1055.53850"	"1055.53930"	"-0.76"	"-0.00040"	"5/56"	"5"	"56"	"1128821.25323486"	"HCD"	"MS2"	"37.65299"	"64.8"	"100.000"	"50.7076"	"15615"	"15615"	"15592"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"100.4"	""	"83.9"	""	"88.4"	""	"95.4"	"0.2"	"116.3"	"129.7"	""	"281"	"32"	"31.000"	"24.000"	"0.00882421994132711"	"15"	"0.007686"	"0.09414"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEVNIPR"	"[K].vEVNIPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP1"	"Protein pelota homolog OS=Rattus norvegicus OX=10116 GN=Pelo PE=1 SV=1"	"Q5XIP1"	"Protein pelota homolog OS=Rattus norvegicus OX=10116 GN=Pelo PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"5"	"528.32422"	"1055.64116"	"1055.64106"	"0.10"	"0.00005"	"10/54"	"10"	"54"	"757017.784790039"	"HCD"	"MS2"	"42.09822"	"35.0"	"100.000"	"56.7570"	"18077"	"18077"	"18052"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.4"	""	"38.0"	""	"44.6"	""	"73.9"	""	"60.9"	"75.3"	""	"190"	"5"	"29.000"	"22.000"	"3.08122636481882"	"16"	"0.006685"	"0.07512"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDFTDR"	"[R].sSDFTDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P29975"	"Aquaporin-1 OS=Rattus norvegicus OX=10116 GN=Aqp1 PE=1 SV=4"	"P29975"	"Aquaporin-1 OS=Rattus norvegicus OX=10116 GN=Aqp1 PE=1 SV=4"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"528.76129"	"1056.51531"	"1056.51592"	"-0.58"	"-0.00031"	"6/58"	"6"	"58"	"4611297.9262085"	"HCD"	"MS2"	"16.21294"	"227.9"	"100.000"	"27.6755"	"6259"	"6259"	"6232"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"232.8"	""	"190.0"	""	"161.1"	""	"449.0"	"5.1"	"591.2"	"545.0"	""	"232"	"32"	"30.000"	"23.000"	"0.00698969119846255"	""	"0.001546"	"0.01894"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHGFPVR"	"[R].dHGFPVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07116"	"Sulfite oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suox PE=1 SV=2"	"Q07116"	"Sulfite oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suox PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"352.86417"	"1056.57795"	"1056.57879"	"-0.80"	"-0.00028"	"6/48"	"6"	"48"	"3045000.96154785"	"HCD"	"MS2"	"66.05308"	"143.1"	"100.000"	"27.2825"	"6114"	"6114"	"6096"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"180.8"	""	"187.0"	""	"185.1"	""	"226.3"	""	"297.5"	"291.9"	""	"319"	"11"	"32.000"	"25.000"	"1.40527295244778"	"14"	"0.00736"	"0.08688"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHGFPVR"	"[R].dHGFPVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07116"	"Sulfite oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suox PE=1 SV=2"	"Q07116"	"Sulfite oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suox PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"352.86441"	"1056.57868"	"1056.57879"	"-0.11"	"-0.00004"	"7/48"	"7"	"48"	"3481226.11608887"	"HCD"	"MS2"	"43.07925"	"151.5"	"100.000"	"27.3016"	"6107"	"6107"	"6089"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"188.0"	""	"197.9"	""	"203.0"	""	"253.6"	"0.5"	"302.8"	"291.5"	""	"313"	"17"	"31.000"	"24.000"	"0.290746397221851"	"14"	"0.003449"	"0.03513"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLPNNR"	"[R].dVLPNNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"528.80341"	"1056.59953"	"1056.59992"	"-0.37"	"-0.00019"	"4/52"	"4"	"52"	"1744316.23822021"	"HCD"	"MS2"	"0"	"92.5"	"100.000"	"32.9773"	"8416"	"8416"	"8401"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"146.8"	""	"124.8"	""	"138.6"	""	"146.3"	""	"168.9"	"156.0"	""	"314"	"19"	"31.000"	"24.000"	"0.216720329542653"	""	"0.009478"	"0.1242"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEQLLK"	"[K].VPEqLLk.[L]"	"Q4(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q5JCS6"	"Signal-induced proliferation-associated 1-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sipa1l2 PE=1 SV=1"	"Q5JCS6"	"Signal-induced proliferation-associated 1-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sipa1l2 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"528.82831"	"1056.64934"	"1056.65023"	"-0.84"	"-0.00044"	"4/54"	"4"	"54"	"230212.112487793"	"HCD"	"MS2"	"15.51197"	"8.2"	"100.000"	"98.3468"	"34489"	"34489"	"34482"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.5"	""	"9.6"	""	"10.3"	""	"14.0"	""	"15.0"	"16.7"	""	"239"	"24"	"30.000"	"23.000"	"0.0526463061890331"	""	"0.008522"	"0.1054"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEQLLK"	"[K].VPEqLLk.[L]"	"Q4(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q5JCS6"	"Signal-induced proliferation-associated 1-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sipa1l2 PE=1 SV=1"	"Q5JCS6"	"Signal-induced proliferation-associated 1-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sipa1l2 PE=1 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"528.82837"	"1056.64946"	"1056.65023"	"-0.73"	"-0.00038"	"4/54"	"4"	"54"	"208826.33581543"	"HCD"	"MS2"	"12.82576"	"8.0"	"100.000"	"98.3793"	"34467"	"34467"	"34461"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.5"	""	"14.0"	""	"14.4"	""	"12.1"	""	"10.8"	"15.6"	""	"239"	"19"	"30.000"	"23.000"	"0.150788390383585"	"23"	"0.009478"	"0.1239"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEQLLK"	"[K].VPEqLLk.[L]"	"Q4(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q5JCS6"	"Signal-induced proliferation-associated 1-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sipa1l2 PE=1 SV=1"	"Q5JCS6"	"Signal-induced proliferation-associated 1-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sipa1l2 PE=1 SV=1"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"528.82849"	"1056.64971"	"1056.65023"	"-0.49"	"-0.00026"	"4/54"	"4"	"54"	"563375.480651855"	"HCD"	"MS2"	"1.212836"	"19.6"	"100.000"	"98.6443"	"34553"	"34553"	"34545"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.6"	""	"26.1"	""	"30.2"	""	"32.8"	""	"32.1"	"41.0"	""	"239"	"24"	"30.000"	"23.000"	"0.0516854028086835"	""	"0.008728"	"0.1124"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLVIPEK"	"[M].sLVIPEk.[F]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"528.82849"	"1056.64971"	"1056.65023"	"-0.49"	"-0.00026"	"5/58"	"5"	"58"	"4946621.66998291"	"HCD"	"MS2"	"0.1501885"	"154.7"	"100.000"	"88.5929"	"30872"	"30872"	"30862"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"208.2"	""	"224.9"	""	"269.7"	""	"268.4"	""	"264.5"	"228.9"	""	"239"	"27"	"30.000"	"23.000"	"0.0229280914510099"	""	"0.007627"	"0.09103"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLVIPEK"	"[M].sLVIPEk.[F]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"528.82855"	"1056.64983"	"1056.65023"	"-0.38"	"-0.00020"	"5/58"	"5"	"58"	"1128619.59197998"	"HCD"	"MS2"	"8.14343"	"36.5"	"100.000"	"88.0562"	"30668"	"30668"	"30657"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.5"	""	"59.9"	""	"65.5"	""	"61.9"	""	"55.1"	"49.2"	""	"239"	"32"	"30.000"	"23.000"	"0.00726721326528068"	""	"0.007476"	"0.08934"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLVIPEK"	"[M].sLVIPEk.[F]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"528.82855"	"1056.64983"	"1056.65023"	"-0.38"	"-0.00020"	"5/58"	"5"	"58"	"5793376.43597412"	"HCD"	"MS2"	"0"	"181.5"	"100.000"	"88.5981"	"30878"	"30878"	"30870"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"256.8"	""	"274.3"	""	"320.9"	""	"290.5"	""	"305.8"	"269.6"	""	"239"	"34"	"30.000"	"23.000"	"0.00437892901704161"	""	"0.005617"	"0.06352"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLVIPEK"	"[M].sLVIPEk.[F]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"3"	"528.82867"	"1056.65007"	"1056.65023"	"-0.15"	"-0.00008"	"7/58"	"7"	"58"	"794962.964538574"	"HCD"	"MS2"	"19.01289"	"26.9"	"100.000"	"88.0585"	"30674"	"30674"	"30660"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.3"	""	"38.0"	""	"41.1"	""	"51.3"	""	"49.8"	"35.3"	""	"239"	"25"	"30.000"	"23.000"	"0.0397528166186335"	""	"0.00912"	"0.1191"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLVIPEK"	"[M].sLVIPEk.[F]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"528.82892"	"1056.65056"	"1056.65023"	"0.31"	"0.00017"	"5/58"	"5"	"58"	"9261017.00091553"	"HCD"	"MS2"	"0.08478571"	"269.4"	"100.000"	"88.3190"	"30768"	"30768"	"30761"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"411.4"	""	"435.8"	""	"474.6"	""	"431.9"	"0.9"	"436.2"	"353.2"	""	"233"	"35"	"30.000"	"23.000"	"0.00381351909533846"	""	"0.00736"	"0.08493"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLVIPEK"	"[M].sLVIPEk.[F]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"528.82910"	"1056.65093"	"1056.65023"	"0.66"	"0.00035"	"5/58"	"5"	"58"	"8226789.19152832"	"HCD"	"MS2"	"0"	"246.4"	"100.000"	"88.3276"	"30774"	"30774"	"30769"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"351.1"	"3.2"	"401.7"	""	"438.6"	""	"400.9"	""	"393.1"	"340.3"	""	"231"	"41"	"30.000"	"23.000"	"0.000827145638795902"	""	"0.002547"	"0.02531"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTQPLDR"	"[K].vTQPLDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"529.31342"	"1057.61955"	"1057.62032"	"-0.73"	"-0.00039"	"5/64"	"5"	"64"	"7051411.65319824"	"HCD"	"MS2"	"5.332364"	"270.1"	"100.000"	"34.3455"	"8974"	"8974"	"8951"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"385.7"	""	"344.6"	""	"385.3"	""	"430.1"	""	"498.1"	"519.9"	""	"439"	"26"	"33.000"	"26.000"	"0.0501688937340906"	""	"0.003653"	"0.0378"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQSLPR"	"[K].dIQSLPR.[N]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"529.31342"	"1057.61955"	"1057.62032"	"-0.73"	"-0.00039"	"5/62"	"5"	"62"	"8487272.94439697"	"HCD"	"MS2"	"14.73285"	"293.9"	"100.000"	"45.0150"	"13306"	"13306"	"13289"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"394.4"	""	"310.8"	""	"389.8"	""	"532.8"	""	"585.7"	"580.0"	""	"439"	"30"	"33.000"	"26.000"	"0.020064785650272"	"26"	"0.004431"	"0.04645"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTQPLDR"	"[K].vTQPLDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"529.31360"	"1057.61992"	"1057.62032"	"-0.38"	"-0.00020"	"9/64"	"9"	"64"	"2526179.06506348"	"HCD"	"MS2"	"1.978969"	"125.8"	"100.000"	"34.6599"	"9096"	"9096"	"9076"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"176.9"	""	"155.7"	""	"176.5"	""	"212.9"	"5.8"	"226.6"	"237.5"	""	"439"	"24"	"33.000"	"26.000"	"0.0806184649593295"	""	"0.007627"	"0.09128"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQSLPR"	"[K].dIQSLPR.[N]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"529.31372"	"1057.62016"	"1057.62032"	"-0.15"	"-0.00008"	"5/62"	"5"	"62"	"7994930.99084473"	"HCD"	"MS2"	"14.79751"	"282.3"	"100.000"	"45.1670"	"13357"	"13357"	"13339"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"391.9"	""	"293.3"	""	"372.2"	""	"523.3"	""	"549.0"	"550.2"	""	"441"	"29"	"33.000"	"26.000"	"0.0282753893475652"	"25"	"0.004022"	"0.04349"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQSLPR"	"[K].dIQSLPR.[N]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"529.31384"	"1057.62041"	"1057.62032"	"0.08"	"0.00004"	"5/62"	"5"	"62"	"21494097.1959229"	"HCD"	"MS2"	"0.5096178"	"327.1"	"43.770"	"45.3211"	"13432"	"13432"	"13415"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"442.6"	""	"329.2"	""	"435.9"	""	"561.7"	""	"671.4"	"670.0"	""	"431"	"31"	"33.000"	"26.000"	"0.0167666876749078"	"26"	"0.004942"	"0.05602"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTQPLDR"	"[K].vTQPLDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"529.31396"	"1057.62065"	"1057.62032"	"0.31"	"0.00016"	"6/64"	"6"	"64"	"4231517.96453857"	"HCD"	"MS2"	"9.738907"	"172.3"	"100.000"	"34.3606"	"8974"	"8974"	"8951"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"263.9"	""	"234.8"	""	"230.5"	""	"274.9"	""	"299.4"	"331.6"	""	"431"	"28"	"33.000"	"26.000"	"0.0343120980679527"	""	"0.008777"	"0.1147"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQSLPR"	"[K].dIQSLPR.[N]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"529.31396"	"1057.62065"	"1057.62032"	"0.31"	"0.00016"	"5/62"	"5"	"62"	"20441917.2680664"	"HCD"	"MS2"	"0.3889749"	"352.0"	"49.951"	"45.4640"	"13479"	"13479"	"13463"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"459.5"	""	"367.9"	""	"461.2"	""	"629.6"	""	"714.6"	"713.7"	""	"431"	"33"	"33.000"	"26.000"	"0.011626453915201"	""	"0.003581"	"0.03739"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQNPSDR"	"[K].lQNPSDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"529.79260"	"1058.57793"	"1058.57919"	"-1.19"	"-0.00063"	"6/60"	"6"	"60"	"2017129.93121338"	"HCD"	"MS2"	"6.303751"	"113.2"	"100.000"	"26.1609"	"5660"	"5660"	"5644"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"137.1"	""	"109.3"	""	"125.6"	""	"210.5"	"0.4"	"243.7"	"249.6"	""	"491"	"22"	"33.000"	"26.000"	"0.144561117389797"	""	"0.004022"	"0.04278"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQNPSDR"	"[K].lQNPSDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"0"	"2"	"2"	"0.3448"	"0.0000"	"1"	"1"	"1"	"529.79309"	"1058.57891"	"1058.57919"	"-0.27"	"-0.00014"	"6/60"	"6"	"60"	"4769453.26977539"	"HCD"	"MS2"	"33.76442"	"223.0"	"100.000"	"25.9594"	"5564"	"5564"	"5545"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"255.5"	""	"213.5"	""	"230.5"	""	"442.4"	""	"518.8"	"462.4"	""	"497"	"29"	"33.000"	"26.000"	"0.0315737665144323"	""	"0.003189"	"0.03204"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQNPSDR"	"[K].lQNPSDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"529.79327"	"1058.57927"	"1058.57919"	"0.08"	"0.00004"	"5/60"	"5"	"60"	"4850650.34838867"	"HCD"	"MS2"	"45.40337"	"222.3"	"100.000"	"25.8696"	"5543"	"5543"	"5512"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"275.2"	""	"205.1"	""	"217.5"	""	"431.0"	""	"507.6"	"478.8"	""	"493"	"27"	"33.000"	"26.000"	"0.0449590290621791"	""	"0.003449"	"0.03259"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPELTQ"	"[R].eIPELTQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R5H8"	"Fas apoptotic inhibitory molecule 1 OS=Rattus norvegicus OX=10116 GN=Faim PE=2 SV=1"	"Q8R5H8"	"Fas apoptotic inhibitory molecule 1 OS=Rattus norvegicus OX=10116 GN=Faim PE=2 SV=1"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"529.80011"	"1058.59294"	"1058.59311"	"-0.15"	"-0.00008"	"5/58"	"5"	"58"	"501734.331542969"	"HCD"	"MS2"	"10.36986"	"15.6"	"100.000"	"78.0141"	"26687"	"26687"	"26671"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.5"	""	"19.1"	""	"20.8"	""	"26.3"	""	"29.2"	"29.6"	""	"486"	"25"	"33.000"	"26.000"	"0.0694394502040112"	""	"0.00912"	"0.1182"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPESVER"	"[R].lPESVER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"529.80469"	"1058.60210"	"1058.60434"	"-2.12"	"-0.00112"	"7/54"	"7"	"54"	"6344187.55871582"	"HCD"	"MS2"	"11.40194"	"218.6"	"100.000"	"42.2565"	"12189"	"12189"	"12172"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"244.2"	""	"243.3"	""	"255.5"	""	"424.9"	""	"447.6"	"461.2"	""	"528"	"14"	"34.000"	"27.000"	"1.06808035408125"	"26"	"0.008478"	"0.1029"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEDLPLR"	"[R].sEDLPLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.4839"	"0.0000"	"1"	"1"	"1"	"529.80548"	"1058.60369"	"1058.60434"	"-0.62"	"-0.00033"	"9/52"	"9"	"52"	"4345112.73510742"	"HCD"	"MS2"	"1.849305"	"174.6"	"100.000"	"46.2715"	"13807"	"13807"	"13789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"204.1"	""	"184.6"	""	"215.1"	""	"323.7"	"1.3"	"351.3"	"377.9"	""	"521"	"31"	"34.000"	"27.000"	"0.0195347441531105"	""	"0.00263"	"0.0257"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEDLPLR"	"[R].sEDLPLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.4839"	"0.0000"	"1"	"1"	"1"	"529.80579"	"1058.60430"	"1058.60434"	"-0.04"	"-0.00002"	"9/52"	"9"	"52"	"4767414.30212402"	"HCD"	"MS2"	"2.473366"	"187.5"	"100.000"	"46.1151"	"13755"	"13755"	"13737"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"219.2"	""	"215.3"	""	"226.7"	""	"340.3"	"1.9"	"393.6"	"384.2"	""	"524"	"31"	"34.000"	"27.000"	"0.0197379157698234"	""	"0.002379"	"0.02475"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTQLGPGR"	"[R].tTQLGPGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6TUG0"	"DnaJ homolog subfamily B member 11 OS=Rattus norvegicus OX=10116 GN=Dnajb11 PE=2 SV=1"	"Q6TUG0"	"DnaJ homolog subfamily B member 11 OS=Rattus norvegicus OX=10116 GN=Dnajb11 PE=2 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"529.81091"	"1058.61455"	"1058.61557"	"-0.97"	"-0.00051"	"6/68"	"6"	"68"	"6600288.07385254"	"HCD"	"MS2"	"0"	"266.0"	"100.000"	"26.8699"	"5948"	"5948"	"5926"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"340.4"	""	"324.3"	""	"341.0"	""	"479.7"	"8.4"	"494.5"	"534.8"	""	"509"	"19"	"34.000"	"27.000"	"0.348086986114144"	"22"	"0.001374"	"0.01739"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGLQQR"	"[R].lDGLQQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"529.81097"	"1058.61467"	"1058.61557"	"-0.85"	"-0.00045"	"5/52"	"5"	"52"	"6858685.85571289"	"HCD"	"MS2"	"47.64412"	"281.5"	"100.000"	"42.0316"	"12086"	"12086"	"12065"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"409.7"	""	"356.6"	""	"367.5"	""	"472.6"	"5.3"	"520.1"	"536.1"	""	"509"	"13"	"34.000"	"27.000"	"1.34799346470427"	"19"	"0.008478"	"0.1023"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPLNTTR"	"[K].qPLNTTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"529.81134"	"1058.61540"	"1058.61557"	"-0.16"	"-0.00008"	"6/62"	"6"	"62"	"2515898.83935547"	"HCD"	"MS2"	"0"	"118.9"	"100.000"	"24.0278"	"4785"	"4785"	"4758"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"174.9"	""	"149.7"	""	"151.5"	""	"206.5"	""	"229.2"	"216.5"	""	"510"	"19"	"34.000"	"27.000"	"0.292779173481705"	"19"	"0.006308"	"0.07185"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTQLGPGR"	"[R].tTQLGPGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6TUG0"	"DnaJ homolog subfamily B member 11 OS=Rattus norvegicus OX=10116 GN=Dnajb11 PE=2 SV=1"	"Q6TUG0"	"DnaJ homolog subfamily B member 11 OS=Rattus norvegicus OX=10116 GN=Dnajb11 PE=2 SV=1"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"529.81146"	"1058.61565"	"1058.61557"	"0.07"	"0.00004"	"6/68"	"6"	"68"	"6205133.99572754"	"HCD"	"MS2"	"0"	"257.1"	"100.000"	"26.9278"	"5955"	"5955"	"5937"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"325.3"	""	"287.0"	""	"331.7"	""	"466.7"	"9.5"	"502.1"	"517.1"	""	"500"	"17"	"33.000"	"26.000"	"0.46231715474452"	"23"	"0.004942"	"0.053"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLIER"	"[R].lADLIER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"529.82367"	"1058.64006"	"1058.64073"	"-0.63"	"-0.00033"	"5/54"	"5"	"54"	"796848.178344727"	"HCD"	"MS2"	"17.11174"	"37.9"	"100.000"	"78.4088"	"26844"	"26844"	"26831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.2"	""	"47.2"	""	"63.4"	""	"54.3"	""	"67.8"	"74.7"	""	"487"	"15"	"33.000"	"26.000"	"0.69103328342552"	"25"	"0.008668"	"0.11"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLIER"	"[R].lADLIER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"529.82367"	"1058.64006"	"1058.64073"	"-0.63"	"-0.00033"	"5/54"	"5"	"54"	"904422.424621582"	"HCD"	"MS2"	"30.65926"	"42.6"	"100.000"	"78.4644"	"26861"	"26861"	"26842"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.3"	""	"48.1"	""	"66.9"	""	"74.7"	"2.0"	"70.5"	"83.0"	""	"487"	"26"	"33.000"	"26.000"	"0.0613054331909282"	""	"0.001886"	"0.02153"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNDLAR"	"[K].eLNDLAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62839"	"Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus OX=10116 GN=Ube2d2 PE=1 SV=1"	"P62839"	"Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus OX=10116 GN=Ube2d2 PE=1 SV=1"	"0"	"2"	"2"	"0.2647"	"0.0000"	"1"	"1"	"1"	"530.30267"	"1059.59807"	"1059.59959"	"-1.43"	"-0.00076"	"6/62"	"6"	"62"	"4682853.47991943"	"HCD"	"MS2"	"0"	"212.1"	"100.000"	"43.4975"	"12695"	"12695"	"12676"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"323.0"	"3.1"	"230.3"	""	"271.1"	""	"380.9"	"3.1"	"405.6"	"393.3"	""	"607"	"34"	"34.000"	"27.000"	"0.0117803636078162"	""	"0.005874"	"0.06583"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ADLLDQR"	"[K].aDLLDQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99P74"	"Ras-related protein Rab-27B OS=Rattus norvegicus OX=10116 GN=Rab27b PE=2 SV=3"	"Q99P74"	"Ras-related protein Rab-27B OS=Rattus norvegicus OX=10116 GN=Rab27b PE=2 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"530.30304"	"1059.59880"	"1059.59959"	"-0.74"	"-0.00039"	"4/56"	"4"	"56"	"2186449.02838135"	"HCD"	"MS2"	"14.48183"	"102.2"	"100.000"	"50.0398"	"15354"	"15354"	"15334"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"154.0"	""	"104.6"	""	"132.2"	""	"161.5"	"2.4"	"200.6"	"214.5"	""	"615"	"14"	"34.000"	"27.000"	"1.14774423522184"	"26"	"0.008522"	"0.105"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNDLAR"	"[K].eLNDLAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62839"	"Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus OX=10116 GN=Ube2d2 PE=1 SV=1"	"P62839"	"Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus OX=10116 GN=Ube2d2 PE=1 SV=1"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"530.30310"	"1059.59892"	"1059.59959"	"-0.63"	"-0.00033"	"6/62"	"6"	"62"	"3832292.54199219"	"HCD"	"MS2"	"18.03834"	"184.8"	"100.000"	"43.6702"	"12755"	"12755"	"12734"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"279.7"	""	"194.5"	""	"223.5"	""	"326.4"	""	"360.4"	"370.1"	""	"615"	"30"	"34.000"	"27.000"	"0.0345020674697854"	""	"0.009363"	"0.1224"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALADVVR"	"[K].sALADVVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"530.32153"	"1059.63579"	"1059.63597"	"-0.17"	"-0.00009"	"7/64"	"7"	"64"	"1005553.44354248"	"HCD"	"MS2"	"0"	"53.1"	"100.000"	"51.7759"	"16050"	"16050"	"16027"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.0"	""	"58.3"	""	"63.8"	""	"96.0"	"3.8"	"113.0"	"104.5"	""	"576"	"33"	"34.000"	"27.000"	"0.0148385849639546"	"22"	"0"	"0.002282"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALADVVR"	"[K].sALADVVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"530.32166"	"1059.63603"	"1059.63597"	"0.06"	"0.00003"	"7/64"	"7"	"64"	"1458332.50488281"	"HCD"	"MS2"	"13.91922"	"71.2"	"100.000"	"51.3445"	"15885"	"15885"	"15861"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"93.3"	""	"79.6"	""	"97.7"	""	"126.2"	""	"137.3"	"146.3"	""	"547"	"35"	"34.000"	"27.000"	"0.00916130476096659"	"23"	"0"	"0.002017"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDEILR"	"[R].sVDEILR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"3"	"530.81268"	"1060.61809"	"1060.61999"	"-1.79"	"-0.00095"	"6/54"	"6"	"54"	"23521686.5209961"	"HCD"	"MS2"	"0.1941417"	"280.5"	"29.003"	"59.2581"	"19097"	"19097"	"19080"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"395.5"	""	"357.6"	""	"399.7"	""	"485.5"	""	"488.0"	"530.5"	""	"669"	"24"	"35.000"	"28.000"	"0.141382651471844"	"28"	"0.007627"	"0.09266"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVDDIR"	"[R].lTVDDIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.6341"	"0.0000"	"1"	"1"	"1"	"530.81287"	"1060.61846"	"1060.61999"	"-1.45"	"-0.00077"	"5/54"	"5"	"54"	"2206947.42370605"	"HCD"	"MS2"	"32.46908"	"92.2"	"100.000"	"58.0399"	"18599"	"18599"	"18575"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"158.1"	""	"126.2"	""	"108.7"	""	"140.3"	"0.6"	"163.0"	"175.9"	""	"667"	"41"	"35.000"	"28.000"	"0.0025828300956714"	""	"0.002973"	"0.02854"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVDDIR"	"[R].lTVDDIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.6341"	"0.0000"	"1"	"1"	"1"	"530.81299"	"1060.61870"	"1060.61999"	"-1.22"	"-0.00065"	"5/54"	"5"	"54"	"2050560.41516113"	"HCD"	"MS2"	"42.61975"	"83.8"	"100.000"	"57.8377"	"18531"	"18531"	"18511"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"131.7"	""	"104.9"	""	"112.6"	""	"138.7"	"0.5"	"148.4"	"156.7"	""	"667"	"41"	"35.000"	"28.000"	"0.00260672872830208"	""	"0.004942"	"0.05307"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDEILR"	"[R].sVDEILR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"3"	"530.81299"	"1060.61870"	"1060.61999"	"-1.22"	"-0.00065"	"6/54"	"6"	"54"	"46853679.5473633"	"HCD"	"MS2"	"0.4343347"	"453.7"	"25.248"	"58.7681"	"18912"	"18912"	"18895"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"657.9"	""	"584.0"	""	"633.6"	""	"781.5"	""	"792.5"	"856.1"	""	"667"	"23"	"35.000"	"28.000"	"0.154915844286787"	""	"0.007627"	"0.09251"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDEILR"	"[R].sVDEILR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"3"	"530.81311"	"1060.61894"	"1060.61999"	"-0.99"	"-0.00052"	"6/54"	"6"	"54"	"17690726.329834"	"HCD"	"MS2"	"0.3084593"	"329.1"	"46.286"	"59.0766"	"19038"	"19038"	"19021"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"460.3"	""	"401.5"	""	"487.3"	""	"537.2"	""	"603.2"	"633.2"	""	"675"	"24"	"35.000"	"28.000"	"0.124243528604354"	""	"0.007627"	"0.09284"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTIAEER"	"[R].lTIAEER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"530.81311"	"1060.61894"	"1060.61999"	"-0.99"	"-0.00052"	"5/56"	"5"	"56"	"10214368.7081909"	"HCD"	"MS2"	"0.6843706"	"312.0"	"68.577"	"45.8457"	"13645"	"13645"	"13627"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"459.9"	""	"459.2"	""	"536.8"	""	"492.1"	"6.0"	"533.1"	"463.0"	""	"675"	"39"	"35.000"	"28.000"	"0.00381306121202069"	""	"0.003449"	"0.03426"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVDDIR"	"[R].lTVDDIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.5952"	"0.0000"	"1"	"1"	"1"	"530.81317"	"1060.61907"	"1060.61999"	"-0.87"	"-0.00046"	"5/54"	"5"	"54"	"7645239.71380615"	"HCD"	"MS2"	"0.6116306"	"284.3"	"100.000"	"58.3349"	"18720"	"18720"	"18703"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"386.7"	""	"346.9"	""	"387.2"	""	"448.1"	""	"554.5"	"578.6"	""	"675"	"42"	"35.000"	"28.000"	"0.00221959520107454"	""	"0.002795"	"0.02655"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDEILR"	"[R].sVDEILR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"3"	"530.81323"	"1060.61919"	"1060.61999"	"-0.76"	"-0.00040"	"6/54"	"6"	"54"	"32701521.3630371"	"HCD"	"MS2"	"0.7131898"	"600.2"	"48.519"	"58.9450"	"18969"	"18969"	"18952"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"890.2"	""	"752.0"	""	"857.8"	""	"1015.0"	""	"1075.3"	"1103.6"	""	"675"	"23"	"35.000"	"28.000"	"0.155336593583707"	""	"0.006769"	"0.07934"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTIAEER"	"[R].lTIAEER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"530.81329"	"1060.61931"	"1060.61999"	"-0.64"	"-0.00034"	"5/56"	"5"	"56"	"6845369.31677246"	"HCD"	"MS2"	"0"	"320.5"	"100.000"	"46.0390"	"13712"	"13712"	"13693"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"477.0"	""	"468.0"	""	"520.0"	""	"515.4"	"15.1"	"536.2"	"499.3"	""	"675"	"39"	"35.000"	"28.000"	"0.00417132258787522"	""	"0.002871"	"0.02675"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTIAEER"	"[R].lTIAEER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"530.81329"	"1060.61931"	"1060.61999"	"-0.64"	"-0.00034"	"5/56"	"5"	"56"	"6995246.67736816"	"HCD"	"MS2"	"21.98288"	"297.3"	"100.000"	"45.5445"	"13522"	"13522"	"13507"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"467.9"	""	"482.0"	""	"514.4"	""	"437.8"	""	"484.2"	"426.6"	""	"675"	"39"	"35.000"	"28.000"	"0.00383066150289406"	""	"0.001546"	"0.01906"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVDDIR"	"[R].lTVDDIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"530.81335"	"1060.61943"	"1060.61999"	"-0.53"	"-0.00028"	"5/54"	"5"	"54"	"7857544.5692749"	"HCD"	"MS2"	"0"	"295.5"	"100.000"	"58.1417"	"18656"	"18656"	"18639"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"410.8"	""	"347.2"	""	"385.7"	""	"490.7"	""	"566.5"	"605.0"	""	"675"	"42"	"35.000"	"28.000"	"0.0021891412132253"	""	"0.001211"	"0.01516"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTIAEER"	"[R].lTIAEER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"530.81335"	"1060.61943"	"1060.61999"	"-0.53"	"-0.00028"	"5/56"	"5"	"56"	"8512865.88873291"	"HCD"	"MS2"	"11.21927"	"365.5"	"100.000"	"45.7193"	"13582"	"13582"	"13566"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"557.0"	""	"624.6"	""	"635.0"	""	"531.9"	""	"591.3"	"516.5"	""	"675"	"40"	"35.000"	"28.000"	"0.00376074405087208"	""	"0.001635"	"0.01988"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDEILR"	"[R].sVDEILR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"530.81354"	"1060.61980"	"1060.61999"	"-0.18"	"-0.00010"	"6/54"	"6"	"54"	"1520237.57995605"	"HCD"	"MS2"	"15.58492"	"66.0"	"100.000"	"59.4266"	"19180"	"19180"	"19158"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"92.2"	""	"91.5"	""	"93.3"	""	"102.5"	"1.5"	"119.1"	"125.2"	""	"675"	"15"	"35.000"	"28.000"	"1.18925168976839"	"22"	"0.008478"	"0.1039"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STELLIR"	"[K].sTELLIR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"P84245"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2; Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"530.83105"	"1060.65483"	"1060.65638"	"-1.45"	"-0.00077"	"5/52"	"5"	"52"	"1826520.17590332"	"HCD"	"MS2"	"20.49205"	"81.1"	"100.000"	"55.0507"	"17395"	"17395"	"17368"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.4"	""	"55.5"	""	"59.1"	""	"140.7"	""	"221.3"	"237.0"	""	"444"	"21"	"33.000"	"26.000"	"0.184651557184793"	"21"	"0.004022"	"0.04297"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STELLIR"	"[K].sTELLIR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"P84245"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2; Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"530.83105"	"1060.65483"	"1060.65638"	"-1.45"	"-0.00077"	"5/52"	"5"	"52"	"2202610.34277344"	"HCD"	"MS2"	"0"	"93.7"	"100.000"	"55.2967"	"17481"	"17481"	"17463"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.0"	""	"58.1"	""	"61.5"	""	"157.3"	""	"291.6"	"268.4"	""	"444"	"24"	"33.000"	"26.000"	"0.0942655431960815"	"21"	"0.003507"	"0.03645"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STELLIR"	"[K].sTELLIR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"P84245"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2; Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"530.83148"	"1060.65569"	"1060.65638"	"-0.65"	"-0.00034"	"10/52"	"10"	"52"	"2485950.32849121"	"HCD"	"MS2"	"13.47574"	"110.9"	"100.000"	"55.3430"	"17514"	"17514"	"17495"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.4"	""	"90.5"	""	"76.7"	""	"180.3"	"0.3"	"304.0"	"334.9"	""	"445"	"19"	"33.000"	"26.000"	"0.293312124328801"	"20"	"0.004069"	"0.04423"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STELLIR"	"[K].sTELLIR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"P84245"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2; Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"530.83191"	"1060.65654"	"1060.65638"	"0.16"	"0.00008"	"9/52"	"9"	"52"	"1776513.78503418"	"HCD"	"MS2"	"16.1563"	"78.8"	"100.000"	"55.5984"	"17604"	"17604"	"17586"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.6"	""	"62.7"	""	"64.9"	""	"128.2"	""	"214.8"	"217.4"	""	"420"	"20"	"33.000"	"26.000"	"0.197796815269796"	"21"	"0.003111"	"0.03077"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APGFGDNR"	"[K].aPGFGDNR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"531.77985"	"1062.55242"	"1062.55297"	"-0.52"	"-0.00028"	"7/58"	"7"	"58"	"15077157.038269"	"HCD"	"MS2"	"31.49069"	"605.8"	"100.000"	"33.3241"	"8557"	"8557"	"8544"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"843.0"	""	"771.5"	""	"837.3"	""	"1038.3"	"19.1"	"1134.9"	"1096.4"	""	"540"	"16"	"34.000"	"27.000"	"0.687644168197961"	"20"	"0.001374"	"0.01679"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APGFGDNR"	"[K].aPGFGDNR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"531.77997"	"1062.55266"	"1062.55297"	"-0.30"	"-0.00016"	"7/58"	"7"	"58"	"17076356.1262207"	"HCD"	"MS2"	"28.98552"	"619.0"	"87.332"	"33.3148"	"8560"	"8560"	"8550"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"876.2"	""	"745.1"	""	"886.7"	""	"1081.4"	"14.8"	"1150.2"	"1109.7"	""	"510"	"19"	"34.000"	"27.000"	"0.324743285659249"	"19"	"0.001211"	"0.01474"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASAGGGGK"	"[K].aSAGGGGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"531.81909"	"1062.63091"	"1062.63078"	"0.12"	"0.00006"	"4/56"	"4"	"56"	"3758507.27508545"	"HCD"	"MS2"	"7.429375"	"318.6"	"100.000"	"21.1148"	"3622"	"3622"	"3601"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"508.1"	"3.2"	"362.1"	""	"404.5"	""	"546.7"	"16.6"	"586.0"	"591.8"	""	"507"	"4"	"34.000"	"27.000"	"9.11964564619806"	"15"	"0.003717"	"0.03856"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INSTEDR"	"[K].iNSTEDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"532.28235"	"1063.55742"	"1063.55812"	"-0.66"	"-0.00035"	"5/64"	"5"	"64"	"5937034.01660156"	"HCD"	"MS2"	"17.68064"	"391.8"	"100.000"	"22.7960"	"4305"	"4305"	"4278"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"665.1"	""	"444.5"	""	"425.9"	""	"418.6"	""	"462.9"	"1315.3"	""	"631"	"17"	"34.000"	"28.000"	"0.690238792356084"	"18"	"0.008522"	"0.1047"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALEQMR"	"[K].sALEQMR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"532.29156"	"1063.57585"	"1063.57675"	"-0.84"	"-0.00045"	"6/58"	"6"	"58"	"4372949.37414551"	"HCD"	"MS2"	"43.80512"	"228.7"	"100.000"	"36.0585"	"9665"	"9665"	"9643"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"294.9"	""	"274.9"	""	"313.6"	""	"296.8"	""	"511.5"	"484.9"	""	"715"	"22"	"35.000"	"28.000"	"0.220940863049483"	"22"	"0.004867"	"0.0524"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALEQMR"	"[K].sALEQMR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"532.29156"	"1063.57585"	"1063.57675"	"-0.84"	"-0.00045"	"5/58"	"5"	"58"	"4937519.95629883"	"HCD"	"MS2"	"55.93122"	"248.2"	"100.000"	"35.9423"	"9623"	"9623"	"9594"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"341.2"	""	"295.5"	""	"328.5"	""	"329.8"	""	"533.5"	"534.0"	""	"715"	"22"	"35.000"	"28.000"	"0.20714575897261"	"20"	"0.006189"	"0.0704"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIEAAQR"	"[K].fIEAAQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"532.30780"	"1063.60832"	"1063.60976"	"-1.35"	"-0.00072"	"5/50"	"5"	"50"	"1531954.9597168"	"HCD"	"MS2"	"0"	"90.3"	"100.000"	"43.7427"	"12793"	"12793"	"12776"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"121.4"	""	"124.1"	""	"116.5"	""	"146.5"	""	"175.0"	"179.1"	""	"554"	"23"	"34.000"	"27.000"	"0.12896734790586"	"19"	"0.005921"	"0.0674"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIEAAQR"	"[K].fIEAAQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"532.30878"	"1063.61028"	"1063.60976"	"0.49"	"0.00026"	"5/50"	"5"	"50"	"1521444.65405273"	"HCD"	"MS2"	"27.74136"	"82.9"	"100.000"	"43.8649"	"12832"	"12832"	"12814"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"120.5"	""	"106.6"	""	"123.1"	""	"134.6"	""	"153.9"	"152.4"	""	"562"	"21"	"34.000"	"27.000"	"0.226833043499923"	"18"	"0.004676"	"0.05025"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQVVDAR"	"[R].fQVVDAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"532.30890"	"1063.61052"	"1063.60976"	"0.72"	"0.00038"	"5/58"	"5"	"58"	"1169028.93341064"	"HCD"	"MS2"	"8.321623"	"59.6"	"100.000"	"51.0358"	"15759"	"15759"	"15739"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"94.3"	""	"83.9"	""	"81.3"	""	"98.4"	""	"106.0"	"104.2"	""	"564"	"22"	"34.000"	"27.000"	"0.198266394207241"	"22"	"0.00736"	"0.08478"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQVVDAR"	"[R].fQVVDAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"532.30908"	"1063.61089"	"1063.60976"	"1.06"	"0.00056"	"4/58"	"4"	"58"	"1444981.20397949"	"HCD"	"MS2"	"10.12133"	"70.7"	"100.000"	"51.3957"	"15895"	"15895"	"15869"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"120.4"	""	"97.2"	""	"110.4"	""	"98.6"	"1.0"	"125.4"	"116.0"	""	"527"	"23"	"34.000"	"27.000"	"0.129354225366211"	"19"	"0.006685"	"0.07549"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSDGAK"	"[K].aGSDGAk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"532.31049"	"1063.61370"	"1063.61479"	"-1.03"	"-0.00055"	"6/50"	"6"	"50"	"18401561.1776123"	"HCD"	"MS2"	"2.463932"	"1284.3"	"100.000"	"21.5413"	"3796"	"3796"	"3774"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2050.2"	""	"1625.0"	""	"1791.6"	""	"2135.0"	""	"2253.4"	"2319.8"	""	"598"	"26"	"34.000"	"27.000"	"0.0678689590713262"	"24"	"0.007686"	"0.0946"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSDGAK"	"[K].aGSDGAk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"532.31097"	"1063.61467"	"1063.61479"	"-0.12"	"-0.00006"	"6/50"	"6"	"50"	"20907583.1954956"	"HCD"	"MS2"	"0"	"1505.0"	"100.000"	"21.6263"	"3813"	"3813"	"3790"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2430.0"	""	"1863.7"	""	"2084.3"	""	"2423.6"	""	"2651.0"	"2810.6"	""	"590"	"26"	"34.000"	"27.000"	"0.0677363851193146"	"24"	"0.007147"	"0.08242"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMLDGDR"	"[K].lmLDGDR.[N]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"532.78314"	"1064.55901"	"1064.56076"	"-1.65"	"-0.00088"	"6/52"	"6"	"52"	"4362148.83428955"	"HCD"	"MS2"	"11.3184"	"154.4"	"100.000"	"44.5140"	"13092"	"13092"	"13077"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"110.7"	""	"108.0"	""	"126.8"	""	"448.3"	"1.4"	"339.5"	"335.1"	""	"567"	"24"	"34.000"	"27.000"	"0.108281200783153"	"22"	"0.008837"	"0.1153"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASASGAMAK"	"[M].aSASGAMAk.[H]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"532.78418"	"1064.56108"	"1064.56076"	"0.30"	"0.00016"	"6/68"	"6"	"68"	"5825104.03717041"	"HCD"	"MS2"	"42.72954"	"213.5"	"100.000"	"40.1376"	"11326"	"11326"	"11310"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"317.4"	""	"288.4"	""	"287.7"	""	"336.3"	""	"399.7"	"395.9"	""	"567"	"23"	"34.000"	"27.000"	"0.137262866210092"	"19"	"0.004022"	"0.04262"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPIDYAR"	"[R].tPIDYAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z272"	"ARF GTPase-activating protein GIT1 OS=Rattus norvegicus OX=10116 GN=Git1 PE=1 SV=1"	"Q9Z272"	"ARF GTPase-activating protein GIT1 OS=Rattus norvegicus OX=10116 GN=Git1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"532.80017"	"1064.59307"	"1064.59378"	"-0.67"	"-0.00036"	"6/54"	"6"	"54"	"5460411.14794922"	"HCD"	"MS2"	"49.47241"	"241.4"	"100.000"	"41.9924"	"12080"	"12080"	"12060"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"310.0"	""	"371.7"	""	"370.0"	""	"354.0"	"0.1"	"414.1"	"466.3"	""	"568"	"12"	"34.000"	"27.000"	"1.74710231849603"	"19"	"0.00736"	"0.08717"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPIDYAR"	"[R].tPIDYAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z272"	"ARF GTPase-activating protein GIT1 OS=Rattus norvegicus OX=10116 GN=Git1 PE=1 SV=1"	"Q9Z272"	"ARF GTPase-activating protein GIT1 OS=Rattus norvegicus OX=10116 GN=Git1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"532.80042"	"1064.59355"	"1064.59378"	"-0.21"	"-0.00011"	"6/54"	"6"	"54"	"5217936.95440674"	"HCD"	"MS2"	"48.32988"	"233.2"	"100.000"	"42.1469"	"12133"	"12133"	"12113"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"336.8"	""	"328.7"	""	"325.3"	""	"345.3"	""	"414.2"	"462.3"	""	"533"	"12"	"34.000"	"27.000"	"1.64322567996085"	"19"	"0.004942"	"0.05385"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEPTLR"	"[R].yGEPTLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"532.80096"	"1064.59465"	"1064.59378"	"0.82"	"0.00044"	"9/52"	"9"	"52"	"7155249.26208496"	"HCD"	"MS2"	"32.27797"	"295.3"	"100.000"	"40.2135"	"11357"	"11357"	"11336"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"458.8"	""	"399.8"	""	"443.3"	""	"435.9"	""	"532.5"	"528.2"	""	"555"	"22"	"34.000"	"27.000"	"0.172688329134442"	"20"	"0.008522"	"0.1058"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMIEISR"	"[K].sMIEISR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"532.80157"	"1064.59587"	"1064.59715"	"-1.20"	"-0.00064"	"6/58"	"6"	"58"	"1734034.07531738"	"HCD"	"MS2"	"51.00793"	"82.1"	"100.000"	"50.0188"	"15346"	"15346"	"15318"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"116.6"	""	"106.1"	""	"118.7"	""	"109.7"	"0.5"	"163.4"	"163.4"	""	"508"	"11"	"34.000"	"27.000"	"1.9179342582702"	"17"	"0.005001"	"0.05635"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMIEISR"	"[K].sMIEISR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"532.80164"	"1064.59599"	"1064.59715"	"-1.08"	"-0.00058"	"4/58"	"4"	"58"	"1854188.72772217"	"HCD"	"MS2"	"40.44051"	"89.2"	"100.000"	"50.3742"	"15479"	"15479"	"15454"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"131.8"	""	"126.9"	""	"126.7"	""	"111.4"	"0.0"	"175.6"	"172.9"	""	"511"	"9"	"34.000"	"27.000"	"2.94029499375303"	"19"	"0.008437"	"0.1017"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPVPAAPAR"	"[K].gPVPAAPAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"532.82391"	"1064.64055"	"1064.64139"	"-0.79"	"-0.00042"	"7/66"	"7"	"66"	"7417081.8505249"	"HCD"	"MS2"	"8.182261"	"324.0"	"100.000"	"31.4312"	"7795"	"7795"	"7772"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"293.2"	""	"314.6"	""	"344.2"	""	"774.9"	""	"715.5"	"639.1"	""	"291"	"31"	"31.000"	"24.000"	"0.011584118548572"	"20"	"0"	"0.0007957"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPVPAAPAR"	"[K].gPVPAAPAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"532.82416"	"1064.64104"	"1064.64139"	"-0.33"	"-0.00018"	"7/66"	"7"	"66"	"4435872.50262451"	"HCD"	"MS2"	"18.88881"	"219.1"	"100.000"	"31.4064"	"7775"	"7775"	"7757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"208.8"	""	"202.2"	""	"249.3"	""	"533.0"	"0.5"	"452.8"	"434.9"	""	"287"	"29"	"31.000"	"24.000"	"0.0167052085220406"	"20"	"0"	"0.001029"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPVPAAPAR"	"[K].gPVPAAPAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"532.82440"	"1064.64153"	"1064.64139"	"0.12"	"0.00007"	"7/66"	"7"	"66"	"5623913.79638672"	"HCD"	"MS2"	"12.45844"	"269.3"	"100.000"	"31.7121"	"7900"	"7900"	"7883"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"278.5"	""	"274.8"	""	"297.0"	""	"585.0"	""	"575.2"	"553.6"	""	"287"	"33"	"31.000"	"24.000"	"0.007275316663742"	"20"	"0"	"0.000893"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISGAGMER"	"[R].iSGAGmER.[M]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"533.28143"	"1065.55559"	"1065.55601"	"-0.39"	"-0.00021"	"7/66"	"7"	"66"	"1986186.56201172"	"HCD"	"MS2"	"10.17726"	"110.6"	"100.000"	"23.6797"	"4649"	"4649"	"4629"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"135.3"	""	"116.0"	""	"131.7"	""	"210.6"	"1.1"	"229.9"	"225.5"	""	"496"	"18"	"33.000"	"26.000"	"0.407804187357303"	"20"	"0.005617"	"0.06394"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGLSR"	"[R].gPSYGLSR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"533.29767"	"1065.58806"	"1065.58902"	"-0.90"	"-0.00048"	"7/64"	"7"	"64"	"14331855.9481812"	"HCD"	"MS2"	"8.766717"	"693.5"	"100.000"	"34.9019"	"9199"	"9199"	"9182"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"878.9"	""	"910.7"	""	"886.5"	""	"1173.1"	""	"1348.3"	"1383.4"	""	"439"	"29"	"33.000"	"26.000"	"0.0257890013309226"	"19"	"0.0006732"	"0.008557"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGLSR"	"[R].gPSYGLSR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"533.29803"	"1065.58879"	"1065.58902"	"-0.22"	"-0.00012"	"7/64"	"7"	"64"	"15086733.37146"	"HCD"	"MS2"	"2.071174"	"456.2"	"57.037"	"35.1938"	"9319"	"9319"	"9306"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"572.1"	""	"573.5"	""	"620.4"	""	"720.8"	"14.1"	"889.3"	"938.5"	""	"427"	"19"	"33.000"	"26.000"	"0.271267571462024"	"15"	"0.001211"	"0.01519"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAIDAGYR"	"[K].aAIDAGYR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RJP0"	"Aldose reductase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Akr1b7 PE=1 SV=1"	"Q5RJP0"	"Aldose reductase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Akr1b7 PE=1 SV=1"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"533.29816"	"1065.58904"	"1065.58902"	"0.01"	"0.00001"	"6/56"	"6"	"56"	"12828736.1445923"	"HCD"	"MS2"	"13.94274"	"568.9"	"94.624"	"37.0545"	"10075"	"10075"	"10059"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"911.0"	""	"849.0"	""	"820.4"	""	"775.3"	""	"962.3"	"1075.2"	""	"430"	"38"	"33.000"	"26.000"	"0.00314368092508194"	"16"	"0"	"0.002486"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGLSR"	"[R].gPSYGLSR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"533.29822"	"1065.58916"	"1065.58902"	"0.13"	"0.00007"	"7/64"	"7"	"64"	"25420027.109375"	"HCD"	"MS2"	"1.330727"	"435.7"	"35.044"	"35.2413"	"9333"	"9333"	"9317"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"540.1"	""	"568.0"	""	"584.2"	""	"686.6"	"6.5"	"850.0"	"898.8"	""	"430"	"24"	"33.000"	"26.000"	"0.0764607334923319"	"18"	"0.001211"	"0.01444"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGLSR"	"[R].gPSYGLSR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"533.29828"	"1065.58928"	"1065.58902"	"0.24"	"0.00013"	"7/64"	"7"	"64"	"8309001.49829102"	"HCD"	"MS2"	"14.55486"	"376.0"	"100.000"	"34.9586"	"9217"	"9217"	"9199"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"478.7"	""	"507.0"	""	"466.9"	""	"649.5"	""	"708.2"	"760.1"	""	"430"	"29"	"33.000"	"26.000"	"0.0293385374366619"	"16"	"0.0003538"	"0.006255"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAIDAGYR"	"[K].aAIDAGYR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RJP0"	"Aldose reductase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Akr1b7 PE=1 SV=1"	"Q5RJP0"	"Aldose reductase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Akr1b7 PE=1 SV=1"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"533.29828"	"1065.58928"	"1065.58902"	"0.24"	"0.00013"	"6/56"	"6"	"56"	"13107019.4882202"	"HCD"	"MS2"	"13.82192"	"605.6"	"100.000"	"37.2324"	"10142"	"10142"	"10125"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"909.6"	""	"911.8"	""	"866.4"	""	"855.4"	""	"1032.3"	"1175.9"	""	"430"	"38"	"33.000"	"26.000"	"0.003136450659592"	"16"	"0"	"0.002472"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDFTGR"	"[R].lEDFTGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"533.78870"	"1066.57012"	"1066.57304"	"-2.74"	"-0.00146"	"6/54"	"6"	"54"	"2075589.79669189"	"HCD"	"MS2"	"3.336933"	"107.6"	"100.000"	"59.1083"	"19035"	"19035"	"19016"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"155.8"	""	"137.2"	""	"148.7"	""	"174.7"	"0.2"	"201.2"	"201.8"	""	"484"	"18"	"33.000"	"26.000"	"0.353033050986634"	"16"	"0.006685"	"0.07472"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDFTGR"	"[R].lEDFTGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"533.78888"	"1066.57048"	"1066.57304"	"-2.40"	"-0.00128"	"6/54"	"6"	"54"	"1634026.40283203"	"HCD"	"MS2"	"4.381442"	"88.9"	"100.000"	"58.9341"	"18979"	"18979"	"18959"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"123.5"	""	"111.7"	""	"128.2"	""	"149.9"	""	"162.4"	"166.9"	""	"489"	"20"	"33.000"	"26.000"	"0.228706687329076"	"17"	"0.00447"	"0.04658"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDFTGR"	"[R].lEDFTGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"533.78998"	"1066.57268"	"1066.57304"	"-0.34"	"-0.00018"	"6/54"	"6"	"54"	"3221639.8381958"	"HCD"	"MS2"	"2.153723"	"152.2"	"100.000"	"58.6183"	"18850"	"18850"	"18831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"224.5"	""	"218.9"	""	"225.0"	""	"235.7"	""	"268.4"	"269.4"	""	"477"	"21"	"33.000"	"26.000"	"0.185989481359797"	"17"	"0.005617"	"0.06459"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDFTGR"	"[R].lEDFTGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"533.79010"	"1066.57292"	"1066.57304"	"-0.11"	"-0.00006"	"5/54"	"5"	"54"	"2608308.89355469"	"HCD"	"MS2"	"0"	"125.1"	"100.000"	"58.7999"	"18909"	"18909"	"18888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"190.3"	""	"178.9"	""	"186.7"	""	"191.8"	""	"218.4"	"221.4"	""	"485"	"23"	"33.000"	"26.000"	"0.128443385143727"	"16"	"0.004069"	"0.04498"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFATEVR"	"[R].dFATEVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"533.79016"	"1066.57305"	"1066.57304"	"0.01"	"0.00000"	"5/56"	"5"	"56"	"1875560.11138916"	"HCD"	"MS2"	"5.366997"	"95.4"	"100.000"	"43.2245"	"12584"	"12584"	"12562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"128.8"	""	"128.9"	""	"130.0"	""	"168.0"	""	"166.9"	"187.9"	""	"485"	"39"	"33.000"	"26.000"	"0.00281003508867618"	""	"0.001374"	"0.01732"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFATEVR"	"[R].dFATEVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"0"	"2"	"2"	"0.5128"	"0.0000"	"1"	"1"	"1"	"533.79053"	"1066.57378"	"1066.57304"	"0.69"	"0.00037"	"5/56"	"5"	"56"	"1319476.16125488"	"HCD"	"MS2"	"29.26967"	"70.4"	"100.000"	"43.2801"	"12596"	"12596"	"12572"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.7"	""	"89.3"	""	"101.9"	""	"124.8"	"0.2"	"134.3"	"126.2"	""	"493"	"39"	"33.000"	"26.000"	"0.00290949036688152"	""	"0.002973"	"0.02989"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQTSIF"	"[K].eLQTSIF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2V8"	"ER membrane protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Emc3 PE=2 SV=3"	"Q5U2V8"	"ER membrane protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Emc3 PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.80249"	"1066.59770"	"1066.59819"	"-0.46"	"-0.00024"	"5/56"	"5"	"56"	"180141.040100098"	"HCD"	"MS2"	"28.07956"	"4.4"	"100.000"	"99.7532"	"34896"	"34896"	"34892"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.3"	""	"6.0"	""	"8.2"	""	"6.1"	""	"8.2"	"6.3"	""	"394"	"23"	"32.000"	"25.000"	"0.0960431125503671"	"14"	"0.005309"	"0.05995"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQTSIF"	"[K].eLQTSIF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2V8"	"ER membrane protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Emc3 PE=2 SV=3"	"Q5U2V8"	"ER membrane protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Emc3 PE=2 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"533.80249"	"1066.59770"	"1066.59819"	"-0.46"	"-0.00024"	"5/56"	"5"	"56"	"181416.219299316"	"HCD"	"MS2"	"30.34539"	"4.8"	"100.000"	"99.7491"	"34932"	"34932"	"34924"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.6"	""	"7.6"	""	"6.2"	""	"10.9"	""	"7.1"	"8.5"	""	"394"	"26"	"32.000"	"25.000"	"0.0461813076618025"	"20"	"0.003717"	"0.03809"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPGVPPQR"	"[K].sPGVPPQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.81342"	"1066.61955"	"1066.62066"	"-1.04"	"-0.00055"	"8/58"	"8"	"58"	"6227001.7835083"	"HCD"	"MS2"	"1.684923"	"212.4"	"100.000"	"25.2888"	"5306"	"5306"	"5283"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"289.4"	""	"309.8"	""	"277.9"	""	"297.1"	"3.2"	"416.6"	"420.9"	""	"283"	"21"	"31.000"	"24.000"	"0.11661554327434"	"14"	"0.004942"	"0.05586"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPGVPPQR"	"[K].sPGVPPQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.81354"	"1066.61980"	"1066.62066"	"-0.81"	"-0.00043"	"8/58"	"8"	"58"	"5800987.75640869"	"HCD"	"MS2"	"0"	"208.6"	"100.000"	"24.9925"	"5186"	"5186"	"5170"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"277.3"	""	"306.2"	""	"266.9"	""	"294.2"	""	"427.4"	"407.3"	""	"283"	"21"	"31.000"	"24.000"	"0.120991939873183"	"14"	"0.002937"	"0.02754"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHISPDR"	"[R].lHISPDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"356.21146"	"1066.61982"	"1066.62066"	"-0.79"	"-0.00028"	"6/52"	"6"	"52"	"13634805.6920776"	"HCD"	"MS2"	"2.193892"	"117.9"	"63.805"	"30.9784"	"7612"	"7612"	"7606"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"145.2"	""	"134.3"	""	"149.0"	""	"217.2"	""	"232.7"	"240.8"	""	"283"	"29"	"31.000"	"24.000"	"0.0196678297316689"	"21"	"0.0008629"	"0.01085"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPGVPPQR"	"[K].sPGVPPQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.81360"	"1066.61992"	"1066.62066"	"-0.69"	"-0.00037"	"8/58"	"8"	"58"	"6438048.83807373"	"HCD"	"MS2"	"0"	"224.7"	"100.000"	"25.0549"	"5197"	"5197"	"5186"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"292.0"	""	"321.6"	""	"266.6"	""	"316.2"	""	"465.0"	"472.5"	""	"283"	"21"	"31.000"	"24.000"	"0.118783588092495"	"14"	"0.004867"	"0.05202"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHISPDR"	"[R].lHISPDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"356.21155"	"1066.62009"	"1066.62066"	"-0.53"	"-0.00019"	"6/52"	"6"	"52"	"5089115.41412354"	"HCD"	"MS2"	"22.84967"	"105.0"	"100.000"	"30.7189"	"7509"	"7509"	"7492"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"139.8"	""	"120.8"	""	"128.0"	""	"222.7"	""	"196.7"	"189.2"	""	"283"	"24"	"31.000"	"24.000"	"0.0610599493711288"	"20"	"0.003449"	"0.03377"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHISPDR"	"[R].lHISPDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"356.21155"	"1066.62009"	"1066.62066"	"-0.53"	"-0.00019"	"6/52"	"6"	"52"	"10717638.1342773"	"HCD"	"MS2"	"2.513339"	"133.1"	"87.896"	"31.0315"	"7622"	"7622"	"7604"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"160.6"	""	"153.7"	""	"174.8"	""	"244.7"	""	"258.8"	"273.5"	""	"283"	"29"	"31.000"	"24.000"	"0.0198041606144026"	"21"	"0.002056"	"0.02231"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHISPDR"	"[R].lHISPDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"356.21161"	"1066.62027"	"1066.62066"	"-0.36"	"-0.00013"	"5/52"	"5"	"52"	"4245354.82794189"	"HCD"	"MS2"	"11.77791"	"95.5"	"100.000"	"30.7354"	"7504"	"7504"	"7483"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"124.2"	""	"100.6"	""	"126.1"	""	"189.0"	""	"182.7"	"189.8"	""	"283"	"17"	"31.000"	"24.000"	"0.287578517047475"	"19"	"0.006769"	"0.07919"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPGVPPQR"	"[K].sPGVPPQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"533.81384"	"1066.62041"	"1066.62066"	"-0.23"	"-0.00013"	"8/58"	"8"	"58"	"6156189.06292725"	"HCD"	"MS2"	"1.58135"	"206.7"	"100.000"	"25.3787"	"5328"	"5328"	"5302"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"304.1"	""	"301.6"	""	"258.9"	""	"290.7"	""	"395.2"	"411.6"	""	"281"	"21"	"31.000"	"24.000"	"0.115525092317563"	"15"	"0.0003538"	"0.007012"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPGVPPQR"	"[K].sPGVPPQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.81384"	"1066.62041"	"1066.62066"	"-0.23"	"-0.00013"	"8/58"	"8"	"58"	"6601086.08282471"	"HCD"	"MS2"	"3.494101"	"220.6"	"100.000"	"25.6587"	"5441"	"5441"	"5425"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"291.4"	""	"302.8"	""	"298.5"	""	"308.5"	""	"428.8"	"464.7"	""	"281"	"21"	"31.000"	"24.000"	"0.118761677745021"	"14"	"0.004069"	"0.04495"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPGVPPQR"	"[K].sPGVPPQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.81390"	"1066.62053"	"1066.62066"	"-0.12"	"-0.00006"	"8/58"	"8"	"58"	"5703943.11456299"	"HCD"	"MS2"	"13.96062"	"188.8"	"100.000"	"26.2187"	"5667"	"5667"	"5657"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"264.0"	""	"282.2"	""	"228.8"	""	"265.3"	""	"366.4"	"386.6"	""	"281"	"21"	"31.000"	"24.000"	"0.110325606662715"	"14"	"0.009239"	"0.1204"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMSAMER"	"[R].nMSAMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"534.26251"	"1067.51775"	"1067.51752"	"0.22"	"0.00012"	"6/66"	"6"	"66"	"5697057.23742676"	"HCD"	"MS2"	"52.08973"	"413.2"	"100.000"	"29.1655"	"6866"	"6866"	"6843"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"722.5"	""	"537.0"	""	"480.6"	""	"488.0"	"1.5"	"814.6"	"874.0"	""	"336"	"14"	"32.000"	"25.000"	"0.726623236138814"	"22"	"0.004867"	"0.05217"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWGAEYR"	"[K].gWGAEYR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"P84025"	"Mothers against decapentaplegic homolog 3 OS=Rattus norvegicus OX=10116 GN=Smad3 PE=1 SV=1"	"O70436; P84025"	"Mothers against decapentaplegic homolog 2 OS=Rattus norvegicus OX=10116 GN=Smad2 PE=1 SV=1; Mothers against decapentaplegic homolog 3 OS=Rattus norvegicus OX=10116 GN=Smad3 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"534.27704"	"1067.54680"	"1067.54716"	"-0.34"	"-0.00018"	"5/48"	"5"	"48"	"1468367.32580566"	"HCD"	"MS2"	"0"	"88.5"	"100.000"	"43.8374"	"12821"	"12821"	"12804"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"131.5"	""	"115.2"	""	"124.7"	""	"141.0"	"1.0"	"161.7"	"163.4"	""	"378"	"23"	"32.000"	"25.000"	"0.101967507655359"	"20"	"0.005369"	"0.06087"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTESLFK"	"[K].NTESLFk.[E]"	"K7(TMT6plex)"	"1"	"1"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"0"	"2"	"2"	"0.4250"	"0.0000"	"1"	"1"	"1"	"534.29895"	"1067.59062"	"1067.59344"	"-2.64"	"-0.00141"	"5/64"	"5"	"64"	"2855449.23016357"	"HCD"	"MS2"	"0"	"141.4"	"100.000"	"46.6591"	"13975"	"13975"	"13959"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"155.9"	""	"166.1"	""	"163.2"	""	"309.3"	""	"266.3"	"283.7"	""	"286"	"40"	"31.000"	"24.000"	"0.00135936485492848"	""	"0.009417"	"0.1229"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVAEGHR"	"[R].gLVAEGHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.5926"	"0.0000"	"1"	"1"	"1"	"356.54306"	"1067.61463"	"1067.61591"	"-1.20"	"-0.00043"	"6/56"	"6"	"56"	"4618027.06884766"	"HCD"	"MS2"	"17.39184"	"139.3"	"100.000"	"22.4815"	"4176"	"4176"	"4154"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"170.4"	""	"195.1"	""	"219.5"	""	"218.4"	""	"254.5"	"271.5"	""	"289"	"27"	"31.000"	"24.000"	"0.0322751186199012"	""	"0.001546"	"0.01924"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVAEGHR"	"[R].gLVAEGHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"534.31097"	"1067.61467"	"1067.61591"	"-1.16"	"-0.00062"	"6/56"	"6"	"56"	"17897607.8613892"	"HCD"	"MS2"	"5.492648"	"743.3"	"100.000"	"22.1535"	"4043"	"4043"	"4019"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1063.7"	""	"1020.9"	""	"1023.4"	""	"1277.5"	""	"1267.8"	"1396.2"	""	"290"	"38"	"31.000"	"24.000"	"0.00246812983717268"	"24"	"0.0001301"	"0.004522"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVAEGHR"	"[R].gLVAEGHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"356.54337"	"1067.61554"	"1067.61591"	"-0.34"	"-0.00012"	"10/56"	"10"	"56"	"91153019.8513184"	"HCD"	"MS2"	"1.798729"	"152.1"	"15.956"	"22.1743"	"4052"	"4052"	"4035"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"226.0"	"6.2"	"219.5"	""	"216.4"	""	"232.5"	"1.5"	"261.6"	"276.5"	""	"247"	"30"	"30.000"	"23.000"	"0.0113153230530067"	""	"0.003967"	"0.04118"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVAEGHR"	"[R].gLVAEGHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"534.31146"	"1067.61565"	"1067.61591"	"-0.24"	"-0.00013"	"7/56"	"7"	"56"	"15302736.8615723"	"HCD"	"MS2"	"4.681997"	"601.1"	"100.000"	"22.1835"	"4038"	"4038"	"4012"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"897.3"	""	"797.6"	""	"829.7"	""	"976.5"	""	"1052.3"	"1152.8"	""	"247"	"35"	"30.000"	"23.000"	"0.00355358704219855"	""	"0"	"0.002606"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLENHAR"	"[R].vLENHAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"534.31165"	"1067.61601"	"1067.61591"	"0.10"	"0.00005"	"6/54"	"6"	"54"	"4423330.38214111"	"HCD"	"MS2"	"36.3381"	"258.2"	"100.000"	"21.3375"	"3695"	"3695"	"3674"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"425.8"	""	"357.5"	""	"348.9"	""	"445.0"	""	"413.9"	"452.2"	""	"247"	"10"	"30.000"	"23.000"	"1.11087951318959"	"17"	"0.006958"	"0.08105"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVAEGHR"	"[R].gLVAEGHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7442"	"0.0000"	"1"	"1"	"1"	"356.54361"	"1067.61628"	"1067.61591"	"0.34"	"0.00012"	"6/56"	"6"	"56"	"82598063.673584"	"HCD"	"MS2"	"1.804324"	"176.5"	"19.903"	"22.1997"	"4045"	"4045"	"4028"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"252.7"	""	"251.4"	""	"254.0"	""	"279.1"	""	"306.5"	"329.2"	""	"247"	"43"	"30.000"	"23.000"	"0.000689710690499986"	""	"0.0004639"	"0.007604"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDSSLDR"	"[K].fDSSLDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"534.77930"	"1068.55132"	"1068.55230"	"-0.92"	"-0.00049"	"6/56"	"6"	"56"	"5651913.91149902"	"HCD"	"MS2"	"46.22428"	"237.8"	"100.000"	"45.6619"	"13570"	"13570"	"13550"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"343.2"	""	"261.3"	""	"291.4"	""	"480.2"	"1.1"	"412.7"	"463.2"	""	"357"	"26"	"32.000"	"25.000"	"0.0450441317887783"	""	"0.003653"	"0.03794"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDSSLDR"	"[K].fDSSLDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"534.77985"	"1068.55242"	"1068.55230"	"0.10"	"0.00006"	"6/56"	"6"	"56"	"5465394.78857422"	"HCD"	"MS2"	"46.73594"	"240.0"	"100.000"	"45.8069"	"13617"	"13617"	"13597"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"372.4"	""	"241.5"	""	"280.2"	""	"479.0"	""	"434.1"	"470.2"	""	"358"	"26"	"32.000"	"25.000"	"0.0445505459972548"	""	"0.003717"	"0.03852"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEGLHR"	"[K].dLEGLHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"356.87112"	"1068.59882"	"1068.59992"	"-1.03"	"-0.00037"	"8/52"	"8"	"52"	"2116539.70239258"	"HCD"	"MS2"	"25.1234"	"114.6"	"100.000"	"32.4025"	"8189"	"8189"	"8164"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.0"	""	"126.3"	""	"150.0"	""	"207.6"	"11.5"	"266.8"	"223.3"	""	"270"	"13"	"31.000"	"24.000"	"0.670399633957954"	"17"	"0.005874"	"0.06612"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEGLHR"	"[K].dLEGLHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"0"	"3"	"3"	"0.2143"	"0.0000"	"1"	"1"	"1"	"356.87122"	"1068.59909"	"1068.59992"	"-0.78"	"-0.00028"	"8/52"	"8"	"52"	"1927575.17657471"	"HCD"	"MS2"	"36.85285"	"104.9"	"100.000"	"32.4237"	"8191"	"8191"	"8170"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"92.8"	""	"105.6"	""	"122.5"	""	"192.7"	"10.3"	"240.4"	"234.1"	""	"259"	"14"	"31.000"	"24.000"	"0.508475191342482"	"24"	"0.001886"	"0.02114"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLHVSLR"	"[K].dLHVSLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"3"	"356.88306"	"1068.63462"	"1068.63631"	"-1.58"	"-0.00056"	"5/56"	"5"	"56"	"3481730.79376221"	"HCD"	"MS2"	"7.618523"	"68.2"	"100.000"	"42.7557"	"12382"	"12382"	"12354"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.0"	""	"62.1"	""	"78.7"	""	"133.9"	""	"176.3"	"140.3"	""	"198"	"23"	"29.000"	"22.000"	"0.0523160799257429"	"20"	"0.002379"	"0.02482"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLHVSLR"	"[K].dLHVSLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"3"	"356.88312"	"1068.63480"	"1068.63631"	"-1.41"	"-0.00050"	"7/56"	"7"	"56"	"1583756.40179443"	"HCD"	"MS2"	"11.46237"	"40.8"	"100.000"	"43.0731"	"12511"	"12511"	"12492"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.3"	""	"47.3"	""	"51.8"	""	"75.7"	""	"96.0"	"83.8"	""	"198"	"18"	"29.000"	"22.000"	"0.143428413500931"	"19"	"0.002973"	"0.02871"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLHVSLR"	"[K].dLHVSLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"3"	"356.88318"	"1068.63498"	"1068.63631"	"-1.24"	"-0.00044"	"7/56"	"7"	"56"	"3031867.06982422"	"HCD"	"MS2"	"7.205308"	"59.7"	"100.000"	"42.6289"	"12341"	"12341"	"12314"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.3"	""	"61.1"	""	"63.6"	""	"116.6"	""	"142.5"	"131.2"	""	"198"	"17"	"29.000"	"22.000"	"0.205416438228036"	"18"	"0.003111"	"0.03073"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLHVSLR"	"[K].dLHVSLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"3"	"356.88327"	"1068.63526"	"1068.63631"	"-0.98"	"-0.00035"	"5/56"	"5"	"56"	"2029886.81311035"	"HCD"	"MS2"	"10.29648"	"49.2"	"100.000"	"42.9440"	"12469"	"12469"	"12451"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.5"	""	"50.3"	""	"69.8"	""	"93.8"	""	"116.7"	"96.2"	""	"184"	"18"	"29.000"	"22.000"	"0.149206528957022"	"17"	"0.002973"	"0.02902"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFNADFR"	"[R].aFNADFR.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"535.28479"	"1069.56230"	"1069.56281"	"-0.47"	"-0.00025"	"5/56"	"5"	"56"	"1545701.47784424"	"HCD"	"MS2"	"19.1941"	"72.6"	"100.000"	"55.3200"	"17505"	"17505"	"17479"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"106.6"	""	"84.5"	""	"109.0"	""	"125.3"	"1.6"	"125.2"	"135.3"	""	"225"	"29"	"30.000"	"23.000"	"0.0154579722188908"	"22"	"0.007413"	"0.08864"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFNADFR"	"[R].aFNADFR.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"535.28497"	"1069.56267"	"1069.56281"	"-0.13"	"-0.00007"	"6/56"	"6"	"56"	"1592049.8348999"	"HCD"	"MS2"	"18.36089"	"81.5"	"100.000"	"55.5316"	"17577"	"17577"	"17554"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.2"	""	"111.2"	""	"109.1"	""	"127.9"	""	"145.1"	"178.5"	""	"258"	"28"	"31.000"	"24.000"	"0.0206342985691292"	"22"	"0.005067"	"0.05738"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMEGLHR"	"[R].vMEGLHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"357.53720"	"1070.59705"	"1070.59782"	"-0.72"	"-0.00026"	"9/48"	"9"	"48"	"2891066.08172607"	"HCD"	"MS2"	"43.31237"	"93.1"	"100.000"	"32.1867"	"8102"	"8102"	"8077"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"122.3"	""	"125.6"	""	"128.3"	""	"160.3"	"4.6"	"172.1"	"169.4"	""	"284"	"26"	"31.000"	"24.000"	"0.0340634274500767"	"21"	"0.0004639"	"0.007592"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMEGLHR"	"[R].vMEGLHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"357.53748"	"1070.59787"	"1070.59782"	"0.05"	"0.00002"	"8/48"	"8"	"48"	"2093508.9854126"	"HCD"	"MS2"	"62.46116"	"84.2"	"100.000"	"32.1551"	"8082"	"8082"	"8054"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"105.1"	""	"113.1"	""	"123.3"	""	"149.2"	"1.9"	"161.8"	"143.7"	""	"284"	"24"	"31.000"	"24.000"	"0.0566615361354242"	"18"	"0.001812"	"0.0203"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPVGLDQR"	"[R].gPVGLDQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"535.81091"	"1070.61455"	"1070.61557"	"-0.96"	"-0.00051"	"7/58"	"7"	"58"	"4184737.56188965"	"HCD"	"MS2"	"5.067822"	"181.8"	"100.000"	"35.1706"	"9309"	"9309"	"9290"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"279.2"	""	"220.1"	""	"266.3"	""	"298.2"	""	"318.9"	"340.9"	""	"284"	"32"	"31.000"	"24.000"	"0.00906334150390579"	"22"	"0.0004639"	"0.007725"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPVGLDQR"	"[R].gPVGLDQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"535.81128"	"1070.61528"	"1070.61557"	"-0.27"	"-0.00015"	"7/58"	"7"	"58"	"3894790.89471436"	"HCD"	"MS2"	"8.554309"	"175.9"	"100.000"	"35.2895"	"9352"	"9352"	"9332"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"278.5"	""	"225.2"	""	"259.3"	""	"281.1"	""	"296.1"	"329.4"	""	"286"	"32"	"31.000"	"24.000"	"0.00908523232547994"	"20"	"0.0002479"	"0.005858"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSEPHAR"	"[R].fSEPHAR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2;cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2; cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"3"	"3"	"0.6538"	"0.0000"	"1"	"1"	"1"	"358.19586"	"1072.57303"	"1072.57371"	"-0.63"	"-0.00023"	"7/50"	"7"	"50"	"32174211.6994629"	"HCD"	"MS2"	"24.97186"	"373.7"	"33.296"	"24.1633"	"4840"	"4840"	"4821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"500.5"	""	"495.9"	""	"506.0"	""	"639.8"	""	"685.3"	"716.9"	""	"353"	"26"	"32.000"	"25.000"	"0.0466385145667323"	"23"	"0.008437"	"0.1003"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSEPHAR"	"[R].fSEPHAR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2;cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2; cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"358.19592"	"1072.57322"	"1072.57371"	"-0.46"	"-0.00016"	"7/50"	"7"	"50"	"30589511.227417"	"HCD"	"MS2"	"26.36229"	"337.5"	"30.249"	"24.0985"	"4829"	"4829"	"4813"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"450.9"	""	"457.5"	""	"440.9"	""	"618.9"	""	"625.3"	"607.5"	""	"353"	"23"	"32.000"	"25.000"	"0.0956631571558866"	"20"	"0.007872"	"0.0969"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EETVPLR"	"[R].eETVPLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"536.81372"	"1072.62016"	"1072.61999"	"0.16"	"0.00009"	"6/52"	"6"	"52"	"2345876.13922119"	"HCD"	"MS2"	"18.6768"	"113.3"	"100.000"	"38.1142"	"10501"	"10501"	"10475"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"126.0"	""	"114.5"	""	"131.7"	""	"195.3"	"0.3"	"252.1"	"257.4"	""	"531"	"36"	"34.000"	"27.000"	"0.00691933767524706"	"27"	"0.001211"	"0.01518"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EETVPLR"	"[R].eETVPLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"536.81390"	"1072.62053"	"1072.61999"	"0.50"	"0.00027"	"6/52"	"6"	"52"	"2280145.32891846"	"HCD"	"MS2"	"38.85273"	"110.5"	"100.000"	"38.3103"	"10573"	"10573"	"10546"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"121.1"	""	"105.9"	""	"123.9"	""	"192.2"	""	"266.2"	"243.2"	""	"508"	"31"	"34.000"	"27.000"	"0.0187427674452792"	"26"	"0.001374"	"0.01625"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLQAGLAR"	"[R].dLQAGLAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O35095"	"Neurochondrin OS=Rattus norvegicus OX=10116 GN=Ncdn PE=1 SV=2"	"O35095"	"Neurochondrin OS=Rattus norvegicus OX=10116 GN=Ncdn PE=1 SV=2"	"0"	"2"	"2"	"0.4872"	"0.0000"	"1"	"1"	"1"	"536.81860"	"1072.62993"	"1072.63122"	"-1.21"	"-0.00065"	"7/66"	"7"	"66"	"2148209.58575439"	"HCD"	"MS2"	"7.483681"	"101.7"	"100.000"	"43.0316"	"12505"	"12505"	"12483"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"139.0"	""	"134.5"	""	"141.8"	""	"151.4"	"0.4"	"189.7"	"207.3"	""	"486"	"39"	"33.000"	"26.000"	"0.00327797980469772"	""	"0.0008629"	"0.00971"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAANGIGR"	"[R].iAAAnGIGR.[L]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"536.81873"	"1072.63017"	"1072.63122"	"-0.98"	"-0.00052"	"8/74"	"8"	"74"	"3855392.71496582"	"HCD"	"MS2"	"16.10288"	"147.8"	"100.000"	"42.0315"	"12096"	"12096"	"12076"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"238.9"	""	"165.6"	""	"194.3"	""	"240.0"	""	"246.6"	"316.0"	""	"474"	"60"	"33.000"	"26.000"	"2.43639862655974E-05"	""	"0"	"7.58E-05"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLQAGLAR"	"[R].dLQAGLAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O35095"	"Neurochondrin OS=Rattus norvegicus OX=10116 GN=Ncdn PE=1 SV=2"	"O35095"	"Neurochondrin OS=Rattus norvegicus OX=10116 GN=Ncdn PE=1 SV=2"	"0"	"2"	"2"	"0.2692"	"0.0000"	"1"	"1"	"1"	"536.81891"	"1072.63054"	"1072.63122"	"-0.64"	"-0.00034"	"7/66"	"7"	"66"	"3760490.60900879"	"HCD"	"MS2"	"4.474675"	"169.4"	"100.000"	"43.0410"	"12498"	"12498"	"12476"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"250.1"	""	"201.2"	""	"245.5"	""	"239.0"	""	"317.5"	"353.9"	""	"474"	"26"	"33.000"	"26.000"	"0.059531708426777"	""	"0.002547"	"0.02504"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQIPTQR"	"[K].tQIPTQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"536.81891"	"1072.63054"	"1072.63122"	"-0.64"	"-0.00034"	"10/66"	"10"	"66"	"11877892.6812744"	"HCD"	"MS2"	"0"	"442.1"	"100.000"	"28.0311"	"6419"	"6419"	"6404"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"692.2"	""	"561.1"	""	"571.7"	""	"688.1"	"8.7"	"834.8"	"833.0"	""	"474"	"30"	"33.000"	"26.000"	"0.0214658626412873"	""	"0.006769"	"0.07832"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQIPTQR"	"[K].tQIPTQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"536.81897"	"1072.63066"	"1072.63122"	"-0.52"	"-0.00028"	"10/66"	"10"	"66"	"11252913.0466919"	"HCD"	"MS2"	"0"	"400.6"	"93.237"	"28.1209"	"6441"	"6441"	"6427"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"612.4"	""	"490.9"	""	"531.5"	""	"640.3"	"7.5"	"754.4"	"759.3"	""	"474"	"28"	"33.000"	"26.000"	"0.0415669678936497"	""	"0.008052"	"0.09858"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVEVNVR"	"[R].qVEVNVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ50"	"Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Rattus norvegicus OX=10116 GN=Hgs PE=1 SV=1"	"Q9JJ50"	"Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Rattus norvegicus OX=10116 GN=Hgs PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"536.81903"	"1072.63078"	"1072.63122"	"-0.41"	"-0.00022"	"6/60"	"6"	"60"	"2608884.7557373"	"HCD"	"MS2"	"32.01274"	"120.7"	"100.000"	"35.6938"	"9517"	"9517"	"9498"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"176.1"	""	"140.6"	""	"169.9"	""	"185.0"	"3.8"	"228.4"	"240.2"	""	"474"	"21"	"33.000"	"26.000"	"0.193976154787945"	""	"0.005617"	"0.06406"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAANGIGR"	"[R].iAAAnGIGR.[L]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"536.81927"	"1072.63127"	"1072.63122"	"0.05"	"0.00002"	"7/74"	"7"	"74"	"4367353.44708252"	"HCD"	"MS2"	"14.66113"	"173.6"	"100.000"	"42.2205"	"12163"	"12163"	"12145"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"282.7"	""	"218.7"	""	"235.2"	""	"259.0"	""	"278.0"	"374.9"	""	"474"	"58"	"33.000"	"26.000"	"3.69613943169988E-05"	""	"0"	"0.0001305"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANELQLR"	"[R].aNELQLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.1364"	"0.0000"	"1"	"1"	"1"	"536.81927"	"1072.63127"	"1072.63122"	"0.05"	"0.00002"	"6/58"	"6"	"58"	"3013249.15740967"	"HCD"	"MS2"	"45.73242"	"129.9"	"100.000"	"42.7025"	"12371"	"12371"	"12346"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"188.5"	""	"165.3"	""	"181.7"	""	"193.3"	""	"228.7"	"275.7"	""	"474"	"22"	"33.000"	"26.000"	"0.150920538455176"	""	"0.004205"	"0.04588"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQIALDR"	"[K].qQIALDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZY0"	"UBX domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Ubxn4 PE=1 SV=1"	"Q5HZY0"	"UBX domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Ubxn4 PE=1 SV=1"	"0"	"2"	"2"	"0.2941"	"0.0000"	"1"	"1"	"1"	"536.81952"	"1072.63176"	"1072.63122"	"0.50"	"0.00027"	"6/60"	"6"	"60"	"3420314.04290771"	"HCD"	"MS2"	"13.9808"	"160.4"	"100.000"	"35.9783"	"9632"	"9632"	"9614"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"215.0"	""	"164.9"	""	"201.5"	""	"276.6"	""	"338.2"	"330.4"	""	"462"	"17"	"33.000"	"26.000"	"0.469474469526267"	"26"	"0.006639"	"0.07423"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAIEEIR"	"[R].iAIEEIR.[SL]"	"N-Term(TMT6plex)"	"1"	"1"	"B3DMA2"	"Acyl-CoA dehydrogenase family member 11 OS=Rattus norvegicus OX=10116 GN=Acad11 PE=1 SV=1"	"B3DMA2"	"Acyl-CoA dehydrogenase family member 11 OS=Rattus norvegicus OX=10116 GN=Acad11 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"536.83191"	"1072.65654"	"1072.65638"	"0.15"	"0.00008"	"5/50"	"5"	"50"	"1264614.45153809"	"HCD"	"MS2"	"25.66846"	"51.1"	"100.000"	"65.2939"	"21525"	"21525"	"21501"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.8"	""	"68.4"	""	"73.0"	""	"69.3"	""	"93.7"	"100.1"	""	"399"	"43"	"32.000"	"26.000"	"0.000946112760594188"	"26"	"0.0008629"	"0.01005"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALEELR"	"[R].lALEELR.[SL]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"Q4KLY4"	"E3 ubiquitin-protein ligase RING2 OS=Rattus norvegicus OX=10116 GN=Rnf2 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"536.83191"	"1072.65654"	"1072.65638"	"0.15"	"0.00008"	"5/50"	"5"	"50"	"1264614.45153809"	"HCD"	"MS2"	"25.66846"	"51.1"	"100.000"	"65.2939"	"21525"	"21525"	"21501"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.8"	""	"68.4"	""	"73.0"	""	"69.3"	""	"93.7"	"100.1"	""	"399"	"43"	"32.000"	"26.000"	"0.000946112760594188"	"26"	"0.0008629"	"0.01005"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAIEEIR"	"[R].iAIEEIR.[SL]"	"N-Term(TMT6plex)"	"1"	"1"	"B3DMA2"	"Acyl-CoA dehydrogenase family member 11 OS=Rattus norvegicus OX=10116 GN=Acad11 PE=1 SV=1"	"B3DMA2"	"Acyl-CoA dehydrogenase family member 11 OS=Rattus norvegicus OX=10116 GN=Acad11 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"536.83191"	"1072.65654"	"1072.65638"	"0.15"	"0.00008"	"5/50"	"5"	"50"	"1170450.60217285"	"HCD"	"MS2"	"26.29432"	"46.0"	"100.000"	"65.3670"	"21539"	"21539"	"21517"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"71.0"	""	"61.4"	""	"62.4"	""	"70.0"	"1.7"	"82.5"	"87.1"	""	"399"	"39"	"32.000"	"26.000"	"0.00225394284977223"	"25"	"0.0006732"	"0.008466"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALEELR"	"[R].lALEELR.[SL]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"Q4KLY4"	"E3 ubiquitin-protein ligase RING2 OS=Rattus norvegicus OX=10116 GN=Rnf2 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"536.83191"	"1072.65654"	"1072.65638"	"0.15"	"0.00008"	"5/50"	"5"	"50"	"1170450.60217285"	"HCD"	"MS2"	"26.29432"	"46.0"	"100.000"	"65.3670"	"21539"	"21539"	"21517"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"71.0"	""	"61.4"	""	"62.4"	""	"70.0"	"1.7"	"82.5"	"87.1"	""	"399"	"39"	"32.000"	"26.000"	"0.00225394284977223"	"25"	"0.0006732"	"0.008466"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGNQGAR"	"[R].iEGNQGAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.5128"	"0.0000"	"1"	"1"	"1"	"537.29877"	"1073.59026"	"1073.59009"	"0.16"	"0.00009"	"6/64"	"6"	"64"	"9601802.17944336"	"HCD"	"MS2"	"0"	"396.2"	"100.000"	"22.0733"	"3993"	"3993"	"3969"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"924.3"	""	"551.3"	""	"409.1"	""	"655.5"	""	"610.6"	"593.7"	""	"512"	"39"	"34.000"	"27.000"	"0.00350945732138202"	""	"0.0001301"	"0.004024"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGNQGAR"	"[R].iEGNQGAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"537.29919"	"1073.59111"	"1073.59009"	"0.95"	"0.00051"	"6/64"	"6"	"64"	"7531138.53082275"	"HCD"	"MS2"	"0"	"314.3"	"100.000"	"22.0135"	"3986"	"3986"	"3961"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"715.6"	""	"456.8"	""	"311.6"	""	"544.2"	""	"454.3"	"489.7"	""	"511"	"37"	"34.000"	"27.000"	"0.00535045732469903"	""	"0.0002479"	"0.005628"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ELEQLGR"	"[R].eLEQLGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	""	"0.0476"	"2"	"2"	"2"	"537.31012"	"1073.61296"	"1073.61524"	"-2.12"	"-0.00114"	"5/58"	"5"	"58"	"3699964.01550293"	"HCD"	"MS2"	"47.23147"	"155.8"	"100.000"	"43.9268"	"12857"	"12857"	"12837"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"217.9"	""	"211.4"	""	"210.7"	""	"234.8"	""	"284.2"	"318.9"	""	"591"	"20"	"34.000"	"27.000"	"0.292790839715813"	""	"0.004867"	"0.05199"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGGLAGSVR"	"[R].qGGLAGSVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1H9"	"Caveolae-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cavin3 PE=1 SV=1"	"Q9Z1H9"	"Caveolae-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cavin3 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"537.31708"	"1073.62688"	"1073.62647"	"0.38"	"0.00020"	"7/80"	"7"	"80"	"3299967.19189453"	"HCD"	"MS2"	"29.035"	"185.7"	"100.000"	"28.2949"	"6525"	"6525"	"6505"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"294.0"	""	"297.1"	""	"306.4"	""	"271.7"	""	"271.8"	"317.8"	""	"570"	"13"	"34.000"	"27.000"	"1.39908744703492"	"19"	"0.009081"	"0.117"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIVQLR"	"[K].sEIVQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"537.32928"	"1073.65129"	"1073.65162"	"-0.31"	"-0.00017"	"4/54"	"4"	"54"	"1769182.24407959"	"HCD"	"MS2"	"50.19216"	"73.4"	"100.000"	"49.3506"	"15073"	"15073"	"15047"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"98.8"	""	"90.9"	""	"101.4"	""	"110.9"	"1.8"	"150.5"	"142.4"	""	"619"	"17"	"34.000"	"27.000"	"0.6647535317434"	"19"	"0.004942"	"0.05441"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIVQLR"	"[K].sEIVQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"537.32983"	"1073.65239"	"1073.65162"	"0.71"	"0.00038"	"4/54"	"4"	"54"	"1951266.49481201"	"HCD"	"MS2"	"43.44198"	"85.4"	"100.000"	"49.7198"	"15212"	"15212"	"15185"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"120.8"	""	"99.3"	""	"120.2"	""	"138.1"	"2.5"	"159.8"	"168.7"	""	"599"	"17"	"34.000"	"27.000"	"0.590740609466399"	"21"	"0.005427"	"0.0627"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIVQLR"	"[K].sEIVQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"537.32990"	"1073.65251"	"1073.65162"	"0.83"	"0.00044"	"4/54"	"4"	"54"	"1141014.37902832"	"HCD"	"MS2"	"17.6261"	"53.6"	"100.000"	"49.6548"	"15197"	"15197"	"15174"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.1"	""	"73.1"	""	"81.2"	""	"85.8"	"0.8"	"90.1"	"97.8"	""	"599"	"15"	"34.000"	"27.000"	"0.917058048390358"	"17"	"0.008837"	"0.1149"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVIINTR"	"[R].eVIINTR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"3"	"537.33044"	"1073.65361"	"1073.65162"	"1.85"	"0.00099"	"5/62"	"5"	"62"	"2435343.66192627"	"HCD"	"MS2"	"24.20889"	"125.3"	"100.000"	"42.3874"	"12242"	"12242"	"12220"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"184.6"	""	"163.7"	""	"172.7"	""	"207.8"	""	"217.2"	"243.3"	""	"573"	"25"	"34.000"	"27.000"	"0.0901829891990028"	"24"	"0.008052"	"0.09879"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTAEIVK"	"[K].ALTAEIVk.[T]"	"K8(TMT6plex)"	"1"	"1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"537.34161"	"1073.67595"	"1073.67678"	"-0.77"	"-0.00041"	"5/60"	"5"	"60"	"894667.358093262"	"HCD"	"MS2"	"60.91441"	"32.0"	"100.000"	"63.7745"	"20897"	"20897"	"20875"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.3"	""	"42.3"	""	"47.2"	""	"50.0"	"0.4"	"52.7"	"59.5"	""	"422"	"16"	"33.000"	"26.000"	"0.492359651141292"	"21"	"0.008668"	"0.1104"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAHDAFR"	"[R].eAHDAFR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.3793"	"0.0000"	"1"	"1"	"1"	"537.77972"	"1074.55217"	"1074.55297"	"-0.75"	"-0.00040"	"6/54"	"6"	"54"	"1707045.25421143"	"HCD"	"MS2"	"7.852157"	"96.7"	"100.000"	"21.5114"	"3784"	"3784"	"3760"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"136.4"	""	"123.2"	""	"99.3"	""	"161.3"	""	"185.6"	"213.2"	""	"423"	"29"	"33.000"	"26.000"	"0.0289941493543867"	""	"0.002711"	"0.02616"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAHDAFR"	"[R].eAHDAFR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.3793"	"0.0000"	"1"	"1"	"1"	"537.78021"	"1074.55315"	"1074.55297"	"0.16"	"0.00009"	"6/54"	"6"	"54"	"1772637.22503662"	"HCD"	"MS2"	"7.750431"	"93.9"	"100.000"	"21.5598"	"3786"	"3786"	"3758"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"132.6"	""	"122.9"	""	"114.5"	""	"142.6"	""	"195.1"	"185.9"	""	"420"	"29"	"33.000"	"26.000"	"0.0295269980067282"	""	"0.0023"	"0.02297"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVAGEDGR"	"[R].aAVAGEDGR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"537.79028"	"1074.57329"	"1074.57410"	"-0.76"	"-0.00041"	"8/66"	"8"	"66"	"3767188.07000732"	"HCD"	"MS2"	"22.87784"	"257.1"	"100.000"	"22.4861"	"4178"	"4178"	"4154"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"345.4"	""	"284.2"	""	"311.8"	""	"504.3"	"32.5"	"492.9"	"466.9"	""	"491"	"25"	"33.000"	"26.000"	"0.0785328749429239"	"21"	"0.0004639"	"0.007586"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQDGWR"	"[R].lAQDGWR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"537.79797"	"1074.58867"	"1074.58936"	"-0.64"	"-0.00034"	"6/56"	"6"	"56"	"4402243.87475586"	"HCD"	"MS2"	"35.45226"	"194.8"	"100.000"	"48.3008"	"14645"	"14645"	"14626"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"275.4"	""	"259.0"	""	"287.9"	""	"296.2"	""	"345.6"	"387.4"	""	"515"	"22"	"34.000"	"27.000"	"0.174492688209749"	""	"0.005921"	"0.06748"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIEEVLR"	"[R].sIEEVLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63615"	"Vacuolar protein sorting-associated protein 33A OS=Rattus norvegicus OX=10116 GN=Vps33a PE=1 SV=1"	"Q63615"	"Vacuolar protein sorting-associated protein 33A OS=Rattus norvegicus OX=10116 GN=Vps33a PE=1 SV=1"	"0"	"2"	"2"	"0.2759"	"0.0000"	"1"	"1"	"1"	"537.82068"	"1074.63408"	"1074.63564"	"-1.45"	"-0.00078"	"6/54"	"6"	"54"	"1093466.24108887"	"HCD"	"MS2"	"19.20736"	"46.8"	"100.000"	"62.5170"	"20384"	"20384"	"20366"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.9"	""	"52.4"	""	"63.8"	""	"82.6"	"2.2"	"94.1"	"92.8"	""	"679"	"29"	"35.000"	"28.000"	"0.0413846968834992"	""	"0.003189"	"0.03207"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILEDLR"	"[R].sILEDLR.[SH]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"537.82068"	"1074.63408"	"1074.63564"	"-1.45"	"-0.00078"	"6/56"	"6"	"56"	"5302891.19464111"	"HCD"	"MS2"	"12.70848"	"193.3"	"100.000"	"74.6434"	"25318"	"25318"	"25301"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"214.6"	""	"211.9"	""	"210.0"	""	"416.4"	"0.3"	"438.8"	"345.1"	""	"679"	"18"	"35.000"	"28.000"	"0.519804193241049"	"21"	"0.007413"	"0.08843"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLEDIR"	"[R].sLLEDIR.[SH]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"Q9QYJ4"	"ATP-binding cassette sub-family B member 9 OS=Rattus norvegicus OX=10116 GN=Abcb9 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"537.82068"	"1074.63408"	"1074.63564"	"-1.45"	"-0.00078"	"6/56"	"6"	"56"	"5302891.19464111"	"HCD"	"MS2"	"12.70848"	"193.3"	"100.000"	"74.6434"	"25318"	"25318"	"25301"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"214.6"	""	"211.9"	""	"210.0"	""	"416.4"	"0.3"	"438.8"	"345.1"	""	"679"	"18"	"35.000"	"28.000"	"0.519804193241049"	"21"	"0.007413"	"0.08843"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEELTR"	"[K].vVEELTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.1562"	"0.0000"	"1"	"1"	"1"	"537.82074"	"1074.63420"	"1074.63564"	"-1.34"	"-0.00072"	"6/54"	"6"	"54"	"4181277.31811523"	"HCD"	"MS2"	"15.91185"	"177.2"	"100.000"	"50.7410"	"15639"	"15639"	"15620"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"265.5"	""	"244.2"	""	"254.0"	""	"268.3"	"2.3"	"307.7"	"335.9"	""	"677"	"32"	"35.000"	"28.000"	"0.0198865145831329"	""	"0.003922"	"0.03943"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIEEIVR"	"[K].sIEEIVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP6"	"Flap endonuclease 1 OS=Rattus norvegicus OX=10116 GN=Fen1 PE=2 SV=1"	"Q5XIP6"	"Flap endonuclease 1 OS=Rattus norvegicus OX=10116 GN=Fen1 PE=2 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"537.82111"	"1074.63494"	"1074.63564"	"-0.66"	"-0.00035"	"5/54"	"5"	"54"	"2256609.4508667"	"HCD"	"MS2"	"34.76037"	"89.9"	"100.000"	"57.3742"	"18328"	"18328"	"18312"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"126.3"	""	"123.5"	""	"130.2"	""	"135.7"	"4.5"	"174.2"	"157.7"	""	"682"	"13"	"35.000"	"28.000"	"1.81448916409977"	"18"	"0.007686"	"0.09444"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEELTR"	"[K].vVEELTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"537.82111"	"1074.63494"	"1074.63564"	"-0.66"	"-0.00035"	"6/54"	"6"	"54"	"5122563.27160645"	"HCD"	"MS2"	"11.71873"	"215.7"	"100.000"	"51.1170"	"15781"	"15781"	"15762"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"324.7"	""	"289.0"	""	"311.1"	""	"335.7"	"2.5"	"380.8"	"398.7"	""	"682"	"35"	"35.000"	"28.000"	"0.0102980353665709"	""	"0.003449"	"0.03302"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIEEIVR"	"[K].sIEEIVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP6"	"Flap endonuclease 1 OS=Rattus norvegicus OX=10116 GN=Fen1 PE=2 SV=1"	"Q5XIP6"	"Flap endonuclease 1 OS=Rattus norvegicus OX=10116 GN=Fen1 PE=2 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"537.82117"	"1074.63506"	"1074.63564"	"-0.54"	"-0.00029"	"6/54"	"6"	"54"	"2024874.09716797"	"HCD"	"MS2"	"28.01411"	"86.4"	"100.000"	"57.1672"	"18258"	"18258"	"18237"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"118.0"	""	"117.9"	""	"122.5"	""	"150.7"	"0.5"	"154.3"	"154.6"	""	"682"	"15"	"35.000"	"28.000"	"1.04172809960649"	"19"	"0.008777"	"0.1134"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEELTR"	"[K].vVEELTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.1935"	"0.0000"	"1"	"1"	"1"	"537.82129"	"1074.63530"	"1074.63564"	"-0.32"	"-0.00017"	"6/54"	"6"	"54"	"3287877.23120117"	"HCD"	"MS2"	"18.6299"	"159.1"	"100.000"	"51.0266"	"15755"	"15755"	"15739"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"256.6"	""	"223.6"	""	"223.2"	""	"236.8"	"7.2"	"266.1"	"291.9"	""	"682"	"31"	"35.000"	"28.000"	"0.0289570541987383"	""	"0.003449"	"0.03442"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIEEVLR"	"[R].sIEEVLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63615"	"Vacuolar protein sorting-associated protein 33A OS=Rattus norvegicus OX=10116 GN=Vps33a PE=1 SV=1"	"Q63615"	"Vacuolar protein sorting-associated protein 33A OS=Rattus norvegicus OX=10116 GN=Vps33a PE=1 SV=1"	"0"	"2"	"2"	"0.3704"	"0.0000"	"1"	"1"	"1"	"537.82135"	"1074.63542"	"1074.63564"	"-0.20"	"-0.00011"	"6/54"	"6"	"54"	"1025337.33612061"	"HCD"	"MS2"	"13.35374"	"44.3"	"100.000"	"62.3245"	"20322"	"20322"	"20307"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"62.7"	""	"56.4"	""	"55.6"	""	"74.0"	""	"89.6"	"85.1"	""	"682"	"27"	"35.000"	"28.000"	"0.0637902609864737"	""	"0.002711"	"0.02597"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILEDLR"	"[R].sILEDLR.[SH]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"537.82275"	"1074.63823"	"1074.63564"	"2.41"	"0.00130"	"6/56"	"6"	"56"	"2199108.40679932"	"HCD"	"MS2"	"49.41471"	"82.4"	"100.000"	"74.4345"	"25247"	"25247"	"25228"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.8"	""	"94.0"	""	"81.3"	""	"180.5"	""	"183.3"	"153.4"	""	"727"	"15"	"35.000"	"28.000"	"1.16547889945774"	"18"	"0.008478"	"0.1027"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLEDIR"	"[R].sLLEDIR.[SH]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"Q9QYJ4"	"ATP-binding cassette sub-family B member 9 OS=Rattus norvegicus OX=10116 GN=Abcb9 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"537.82275"	"1074.63823"	"1074.63564"	"2.41"	"0.00130"	"6/56"	"6"	"56"	"2199108.40679932"	"HCD"	"MS2"	"49.41471"	"82.4"	"100.000"	"74.4345"	"25247"	"25247"	"25228"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.8"	""	"94.0"	""	"81.3"	""	"180.5"	""	"183.3"	"153.4"	""	"727"	"15"	"35.000"	"28.000"	"1.16547889945774"	"18"	"0.008478"	"0.1027"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEVTVAR"	"[K].aTEVTVAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"538.31915"	"1075.63103"	"1075.63089"	"0.13"	"0.00007"	"7/62"	"7"	"62"	"4555087.70178223"	"HCD"	"MS2"	"56.64832"	"205.4"	"100.000"	"30.3063"	"7341"	"7341"	"7322"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"272.5"	""	"259.8"	""	"268.1"	""	"328.2"	""	"395.3"	"425.9"	""	"750"	"23"	"35.000"	"28.000"	"0.176616497398857"	"21"	"0.000936"	"0.01316"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEVTVAR"	"[K].aTEVTVAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"538.31921"	"1075.63115"	"1075.63089"	"0.24"	"0.00013"	"7/62"	"7"	"62"	"4544301.42114258"	"HCD"	"MS2"	"54.41038"	"193.4"	"100.000"	"30.3224"	"7336"	"7336"	"7317"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"268.4"	""	"256.3"	""	"256.4"	""	"283.7"	"2.4"	"364.0"	"402.5"	""	"750"	"21"	"35.000"	"28.000"	"0.30201691544965"	"21"	"0.001036"	"0.01346"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHLGMYHR"	"[K].YHLGMYHR.[R]"	""	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"359.50784"	"1076.50898"	"1076.50945"	"-0.44"	"-0.00016"	"6/58"	"6"	"58"	"5667908.39190674"	"HCD"	"MS2"	"22.85829"	"242.2"	"100.000"	"23.1609"	"4437"	"4437"	"4415"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"309.2"	""	"310.0"	""	"319.5"	""	"422.1"	"3.1"	"486.6"	"446.7"	"NoQuanLabels"	"243"	"15"	"30.000"	"23.000"	"0.395891591717441"	"13"	"0.007627"	"0.09083"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLMER"	"[K].lADLMER.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P13601"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"538.80225"	"1076.59722"	"1076.59715"	"0.06"	"0.00003"	"5/54"	"5"	"54"	"938644.818359375"	"HCD"	"MS2"	"9.450412"	"36.9"	"100.000"	"72.6383"	"24517"	"24517"	"24497"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.1"	""	"54.3"	""	"58.3"	""	"53.1"	""	"61.1"	"66.9"	""	"732"	"27"	"35.000"	"28.000"	"0.0675275643419687"	"25"	"0.003449"	"0.03388"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLMER"	"[K].lADLMER.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P13601"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"538.80231"	"1076.59734"	"1076.59715"	"0.18"	"0.00010"	"6/54"	"6"	"54"	"849025.482849121"	"HCD"	"MS2"	"11.96006"	"38.3"	"100.000"	"73.0706"	"24680"	"24680"	"24654"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.4"	""	"51.7"	""	"65.8"	""	"46.7"	""	"62.6"	"81.4"	""	"732"	"36"	"35.000"	"28.000"	"0.00852081400305393"	"24"	"0.001635"	"0.01962"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLMER"	"[K].lADLMER.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P13601"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"538.80249"	"1076.59770"	"1076.59715"	"0.52"	"0.00028"	"6/54"	"6"	"54"	"984352.84753418"	"HCD"	"MS2"	"0"	"39.7"	"100.000"	"72.7616"	"24554"	"24554"	"24530"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.3"	""	"58.0"	""	"63.1"	""	"54.4"	""	"61.4"	"78.8"	""	"740"	"27"	"35.000"	"28.000"	"0.0800205853778998"	"25"	"0.003111"	"0.03093"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLMER"	"[K].lADLMER.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P13601"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"538.80261"	"1076.59795"	"1076.59715"	"0.74"	"0.00040"	"6/54"	"6"	"54"	"854106.962280273"	"HCD"	"MS2"	"2.349745"	"40.8"	"100.000"	"72.9400"	"24640"	"24640"	"24621"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.4"	""	"61.0"	""	"61.0"	""	"58.2"	"0.1"	"68.4"	"77.4"	""	"740"	"32"	"35.000"	"28.000"	"0.0210960780743877"	"23"	"0.001812"	"0.02074"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEVTELR"	"[K].tEVTELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"538.81110"	"1076.61492"	"1076.61490"	"0.01"	"0.00001"	"5/56"	"5"	"56"	"15365823.8903198"	"HCD"	"MS2"	"9.884521"	"511.6"	"74.724"	"37.5901"	"10285"	"10285"	"10275"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"654.5"	""	"613.5"	""	"704.7"	""	"874.8"	"0.3"	"877.8"	"1124.4"	""	"731"	"39"	"35.000"	"28.000"	"0.00488525661297724"	""	"0.003111"	"0.03129"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEVTELR"	"[K].tEVTELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"538.81110"	"1076.61492"	"1076.61490"	"0.01"	"0.00001"	"5/56"	"5"	"56"	"14378931.9266357"	"HCD"	"MS2"	"17.01247"	"524.6"	"76.846"	"37.3893"	"10210"	"10210"	"10199"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"661.8"	""	"619.0"	""	"747.5"	""	"889.0"	"7.5"	"939.1"	"1110.4"	""	"731"	"39"	"35.000"	"28.000"	"0.00516282472559617"	""	"0.003449"	"0.03475"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEVTELR"	"[K].tEVTELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.3590"	"0.0000"	"1"	"1"	"1"	"538.81110"	"1076.61492"	"1076.61490"	"0.01"	"0.00001"	"5/56"	"5"	"56"	"15742638.6203003"	"HCD"	"MS2"	"0"	"584.6"	"92.803"	"37.6619"	"10317"	"10317"	"10305"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"690.6"	""	"625.5"	""	"816.7"	""	"956.1"	"5.8"	"1080.6"	"1374.2"	""	"731"	"39"	"35.000"	"28.000"	"0.00451738786923969"	""	"0.003111"	"0.0308"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEVTELR"	"[K].tEVTELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"538.81128"	"1076.61528"	"1076.61490"	"0.35"	"0.00019"	"5/56"	"5"	"56"	"13675853.5717773"	"HCD"	"MS2"	"0"	"410.9"	"71.186"	"37.8765"	"10398"	"10398"	"10383"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"467.0"	""	"467.4"	""	"547.7"	""	"688.4"	"8.1"	"774.6"	"948.5"	""	"711"	"36"	"35.000"	"28.000"	"0.00926487587024607"	""	"0.00379"	"0.03909"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFEPATGR"	"[K].aFEPATGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"539.29755"	"1077.58782"	"1077.58902"	"-1.12"	"-0.00060"	"7/62"	"7"	"62"	"10289027.6221924"	"HCD"	"MS2"	"16.26394"	"378.5"	"72.373"	"35.0144"	"9245"	"9245"	"9226"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"523.6"	""	"488.0"	""	"492.7"	""	"609.3"	"13.3"	"712.6"	"749.0"	""	"622"	"33"	"34.000"	"27.000"	"0.0145800961847177"	""	"0.0006732"	"0.008195"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFEPATGR"	"[K].aFEPATGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"539.29785"	"1077.58843"	"1077.58902"	"-0.55"	"-0.00030"	"6/62"	"6"	"62"	"8978393.27020264"	"HCD"	"MS2"	"16.70461"	"485.4"	"100.000"	"35.0988"	"9274"	"9274"	"9255"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"672.4"	""	"607.8"	""	"635.9"	""	"796.7"	"7.6"	"910.8"	"971.2"	""	"624"	"29"	"34.000"	"27.000"	"0.0427715111043434"	"25"	"0.0006732"	"0.008933"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFEPATGR"	"[K].aFEPATGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"539.29803"	"1077.58879"	"1077.58902"	"-0.22"	"-0.00012"	"7/62"	"7"	"62"	"18115247.453125"	"HCD"	"MS2"	"22.70833"	"723.1"	"85.982"	"34.7090"	"9122"	"9122"	"9115"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1189.4"	""	"1161.6"	""	"1051.8"	""	"1075.2"	""	"1169.4"	"1199.5"	""	"698"	"36"	"35.000"	"28.000"	"0.00872620531232053"	"28"	"0.0003538"	"0.007095"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFEPATGR"	"[K].aFEPATGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"539.29822"	"1077.58916"	"1077.58902"	"0.12"	"0.00007"	"7/62"	"7"	"62"	"20740778.1391602"	"HCD"	"MS2"	"28.61934"	"628.1"	"66.432"	"34.7863"	"9148"	"9148"	"9135"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1030.9"	""	"985.3"	""	"938.4"	""	"942.7"	""	"998.4"	"1057.4"	""	"698"	"36"	"35.000"	"28.000"	"0.00852757262890196"	"28"	"0.0001301"	"0.004932"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTATLSNGK"	"[R].GTATLSnGk.[L]"	"N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q01812"	"Glutamate receptor ionotropic, kainate 4 OS=Rattus norvegicus OX=10116 GN=Grik4 PE=1 SV=1"	"Q01812"	"Glutamate receptor ionotropic, kainate 4 OS=Rattus norvegicus OX=10116 GN=Grik4 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"539.80200"	"1078.59673"	"1078.59417"	"2.37"	"0.00128"	"5/76"	"5"	"76"	"1098818.14520264"	"HCD"	"MS2"	"6.210153"	"27.7"	"100.000"	"81.9347"	"28263"	"28263"	"28245"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.5"	""	"44.3"	""	"34.7"	""	"42.0"	""	"51.9"	"52.7"	""	"633"	"28"	"35.000"	"28.000"	"0.0514486181195028"	"25"	"0.008668"	"0.1107"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"AFDIIDR"	"[R].aFDIIDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"539.80737"	"1078.60747"	"1078.60943"	"-1.81"	"-0.00098"	"6/54"	"6"	"54"	"601755.226257324"	"HCD"	"MS2"	"18.68403"	"30.3"	"100.000"	"74.2202"	"25160"	"25160"	"25137"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.7"	""	"37.7"	""	"43.6"	""	"49.5"	""	"56.3"	"60.0"	""	"613"	"19"	"34.000"	"27.000"	"0.345486020317794"	"22"	"0.00413"	"0.04516"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGDFLLR"	"[K].eGDFLLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.3214"	"0.0000"	"1"	"1"	"1"	"539.80756"	"1078.60784"	"1078.60943"	"-1.47"	"-0.00079"	"6/52"	"6"	"52"	"2255906.97827148"	"HCD"	"MS2"	"0"	"99.3"	"100.000"	"67.9592"	"22611"	"22611"	"22594"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"132.0"	""	"104.6"	""	"119.2"	""	"175.0"	""	"206.2"	"207.9"	""	"611"	"28"	"34.000"	"27.000"	"0.0442599801257925"	""	"0.004069"	"0.0449"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGDFLLR"	"[K].eGDFLLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"539.80792"	"1078.60857"	"1078.60943"	"-0.80"	"-0.00043"	"6/52"	"6"	"52"	"1405736.39715576"	"HCD"	"MS2"	"6.430918"	"70.3"	"100.000"	"67.6639"	"22491"	"22491"	"22472"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"99.5"	""	"73.3"	""	"81.6"	""	"130.0"	""	"134.1"	"148.4"	""	"608"	"30"	"34.000"	"27.000"	"0.0320533616502943"	""	"0.003111"	"0.03157"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGDFLLR"	"[K].eGDFLLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.3226"	"0.0000"	"1"	"1"	"1"	"539.80798"	"1078.60869"	"1078.60943"	"-0.68"	"-0.00037"	"6/52"	"6"	"52"	"2253676.89086914"	"HCD"	"MS2"	"1.296528"	"105.5"	"100.000"	"68.0852"	"22648"	"22648"	"22631"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"141.0"	""	"114.5"	""	"119.6"	""	"185.2"	""	"217.0"	"229.5"	""	"608"	"31"	"34.000"	"27.000"	"0.0240366302911947"	""	"0.003449"	"0.03422"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAEEFR"	"[K].vVAEEFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"539.80804"	"1078.60881"	"1078.60943"	"-0.57"	"-0.00031"	"6/50"	"6"	"50"	"7308814.36114502"	"HCD"	"MS2"	"0.5526522"	"291.2"	"100.000"	"50.5822"	"15574"	"15574"	"15558"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"349.6"	""	"398.6"	""	"349.5"	""	"408.7"	""	"609.6"	"653.8"	""	"608"	"36"	"34.000"	"27.000"	"0.00827701197655686"	"23"	"0.003653"	"0.03783"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGDFLLR"	"[K].eGDFLLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"3"	"539.80811"	"1078.60893"	"1078.60943"	"-0.46"	"-0.00025"	"5/52"	"5"	"52"	"1033912.42901611"	"HCD"	"MS2"	"7.518971"	"50.4"	"100.000"	"67.7693"	"22519"	"22519"	"22494"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.4"	""	"53.1"	""	"52.9"	""	"92.3"	""	"104.7"	"110.4"	""	"608"	"20"	"34.000"	"27.000"	"0.325741868792232"	"25"	"0.00599"	"0.06944"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFDIIDR"	"[R].aFDIIDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"0"	"2"	"2"	"0.5676"	"0.0000"	"1"	"1"	"1"	"539.80835"	"1078.60942"	"1078.60943"	"0.00"	"0.00000"	"6/54"	"6"	"54"	"1004990.39855957"	"HCD"	"MS2"	"15.40879"	"56.8"	"100.000"	"73.8694"	"25017"	"25017"	"25000"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.6"	""	"73.8"	""	"73.7"	""	"87.9"	"0.8"	"116.5"	"111.1"	""	"585"	"37"	"34.000"	"27.000"	"0.00606912203855561"	""	"0.0006732"	"0.009097"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAEEFR"	"[K].vVAEEFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"539.80835"	"1078.60942"	"1078.60943"	"0.00"	"0.00000"	"6/50"	"6"	"50"	"3496811.73626709"	"HCD"	"MS2"	"42.04604"	"146.5"	"100.000"	"50.3006"	"15449"	"15449"	"15422"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"182.8"	""	"213.4"	""	"172.0"	""	"212.5"	""	"302.6"	"309.4"	""	"585"	"27"	"34.000"	"27.000"	"0.0598585056241967"	"22"	"0.003967"	"0.04128"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAEEFR"	"[K].vVAEEFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"539.80841"	"1078.60954"	"1078.60943"	"0.11"	"0.00006"	"6/50"	"6"	"50"	"8813418.44659424"	"HCD"	"MS2"	"0"	"363.5"	"100.000"	"50.8801"	"15685"	"15685"	"15674"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"418.0"	""	"512.8"	""	"447.2"	""	"496.1"	""	"777.4"	"808.4"	""	"585"	"35"	"34.000"	"27.000"	"0.0103782916350821"	"21"	"0.003449"	"0.03365"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFDIIDR"	"[R].aFDIIDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"539.80847"	"1078.60967"	"1078.60943"	"0.22"	"0.00012"	"6/54"	"6"	"54"	"869665.776672363"	"HCD"	"MS2"	"13.0902"	"48.0"	"100.000"	"73.9976"	"25056"	"25056"	"25040"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"74.1"	""	"64.2"	""	"64.3"	""	"73.1"	""	"86.8"	"95.4"	""	"585"	"39"	"34.000"	"27.000"	"0.00358200238285027"	""	"0.0006732"	"0.008775"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAEEFR"	"[K].vVAEEFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"539.80853"	"1078.60979"	"1078.60943"	"0.34"	"0.00018"	"6/50"	"6"	"50"	"3690130.6027832"	"HCD"	"MS2"	"47.91406"	"154.4"	"100.000"	"49.9728"	"15327"	"15327"	"15302"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"191.7"	""	"218.9"	""	"188.4"	""	"237.9"	""	"321.5"	"309.2"	""	"585"	"27"	"34.000"	"27.000"	"0.0599964937306478"	"22"	"0.002937"	"0.02752"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAEEFR"	"[K].vVAEEFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"539.80902"	"1078.61077"	"1078.60943"	"1.24"	"0.00067"	"6/50"	"6"	"50"	"71049402.5898438"	"HCD"	"MS2"	"0"	"503.5"	"17.984"	"50.2835"	"15454"	"15454"	"15438"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"591.7"	""	"736.1"	""	"575.3"	""	"688.5"	""	"1066.4"	"1138.9"	""	"549"	"33"	"34.000"	"27.000"	"0.0135064852544558"	"21"	"0.00447"	"0.04814"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAEEFR"	"[K].vVAEEFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"539.80927"	"1078.61125"	"1078.60943"	"1.69"	"0.00091"	"6/50"	"6"	"50"	"67031234.8359375"	"HCD"	"MS2"	"0"	"507.8"	"18.869"	"50.5883"	"15567"	"15567"	"15550"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"598.6"	""	"734.3"	""	"584.8"	""	"685.2"	""	"1099.2"	"1132.9"	""	"549"	"34"	"34.000"	"27.000"	"0.0104843702345593"	"21"	"0.004817"	"0.05075"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPPPAGLLQ"	"[R].gPPPAGLLQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P29826"	"Rano class II histocompatibility antigen, B-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Bb PE=2 SV=1"	"P29826"	"Rano class II histocompatibility antigen, B-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Bb PE=2 SV=1"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"539.82605"	"1078.64482"	"1078.64581"	"-0.92"	"-0.00049"	"7/66"	"7"	"66"	"200102.390563965"	"HCD"	"MS2"	"26.37683"	"9.3"	"100.000"	"76.3487"	"26006"	"26006"	"25976"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.7"	""	"9.8"	""	"12.9"	""	"18.8"	""	"19.1"	"17.9"	""	"363"	"11"	"32.000"	"25.000"	"1.3423835742307"	"22"	"0.008777"	"0.1146"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLHPER"	"[K].vVLHPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"360.22336"	"1078.65552"	"1078.65704"	"-1.41"	"-0.00051"	"6/48"	"6"	"48"	"7461879.81634521"	"HCD"	"MS2"	"10.38056"	"155.8"	"100.000"	"28.1319"	"6459"	"6459"	"6440"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"239.4"	""	"185.6"	""	"165.5"	""	"309.2"	""	"292.3"	"285.4"	""	"281"	"34"	"31.000"	"24.000"	"0.00573688737797432"	"18"	"0.006308"	"0.07117"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLHPER"	"[K].vVLHPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"360.22366"	"1078.65644"	"1078.65704"	"-0.56"	"-0.00020"	"6/48"	"6"	"48"	"2667769.76275635"	"HCD"	"MS2"	"4.03"	"130.5"	"100.000"	"28.4973"	"6594"	"6594"	"6569"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"218.4"	""	"180.9"	""	"188.9"	""	"209.4"	"85.0"	"187.7"	"163.2"	""	"259"	"33"	"31.000"	"24.000"	"0.00701891153070104"	"16"	"0.008668"	"0.1087"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLHPER"	"[K].vVLHPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"360.22369"	"1078.65653"	"1078.65704"	"-0.48"	"-0.00017"	"6/48"	"6"	"48"	"5943674.88830566"	"HCD"	"MS2"	"15.22848"	"140.5"	"100.000"	"28.1712"	"6461"	"6461"	"6440"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"208.7"	""	"169.1"	""	"156.3"	""	"273.3"	"0.3"	"267.7"	"256.3"	""	"259"	"30"	"31.000"	"24.000"	"0.0133128110607378"	"14"	"0.005309"	"0.05981"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEMSER"	"[K].sLEMSER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"2"	"2"	"0.3947"	"0.0000"	"1"	"1"	"1"	"540.78046"	"1080.55364"	"1080.55568"	"-1.89"	"-0.00102"	"6/58"	"6"	"58"	"7939973.60192871"	"HCD"	"MS2"	"19.18698"	"355.9"	"100.000"	"34.6114"	"9077"	"9077"	"9060"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"564.1"	""	"538.1"	""	"548.6"	""	"393.7"	""	"641.2"	"687.1"	""	"460"	"38"	"33.000"	"26.000"	"0.00363687049032188"	""	"0.00263"	"0.0258"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEMSER"	"[K].sLEMSER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"2"	"2"	"0.4722"	"0.0000"	"1"	"1"	"1"	"540.78101"	"1080.55474"	"1080.55568"	"-0.87"	"-0.00047"	"6/58"	"6"	"58"	"9053196.45654297"	"HCD"	"MS2"	"18.68892"	"412.6"	"100.000"	"34.5616"	"9062"	"9062"	"9047"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"635.6"	""	"619.1"	""	"659.1"	""	"467.7"	""	"753.9"	"779.4"	""	"462"	"36"	"33.000"	"26.000"	"0.00589674000914748"	""	"0.002056"	"0.02249"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTDEFR"	"[K].aLTDEFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920R3"	"Acyl-CoA (8-3)-desaturase OS=Rattus norvegicus OX=10116 GN=Fads1 PE=1 SV=1"	"Q920R3"	"Acyl-CoA (8-3)-desaturase OS=Rattus norvegicus OX=10116 GN=Fads1 PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"540.79773"	"1080.58818"	"1080.58869"	"-0.47"	"-0.00025"	"6/52"	"6"	"52"	"1356818.55377197"	"HCD"	"MS2"	"42.96746"	"67.1"	"100.000"	"55.3615"	"17522"	"17522"	"17495"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"83.9"	""	"77.0"	""	"86.6"	""	"127.3"	""	"124.6"	"137.6"	""	"485"	"23"	"33.000"	"26.000"	"0.132041893314287"	"24"	"0.00912"	"0.1188"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASQYNIR"	"[R].aSQYNIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MI7"	"NEDD8-activating enzyme E1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Uba3 PE=1 SV=1"	"Q99MI7"	"NEDD8-activating enzyme E1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Uba3 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"540.80298"	"1080.59868"	"1080.59992"	"-1.15"	"-0.00062"	"6/56"	"6"	"56"	"2405095.91925049"	"HCD"	"MS2"	"0"	"143.4"	"100.000"	"30.4966"	"7419"	"7419"	"7394"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"211.7"	""	"178.2"	""	"200.5"	""	"201.1"	"5.9"	"286.2"	"275.9"	""	"515"	"24"	"34.000"	"27.000"	"0.104178292112091"	"22"	"0.005617"	"0.06374"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASQYNIR"	"[R].aSQYNIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MI7"	"NEDD8-activating enzyme E1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Uba3 PE=1 SV=1"	"Q99MI7"	"NEDD8-activating enzyme E1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Uba3 PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"540.80402"	"1080.60076"	"1080.59992"	"0.77"	"0.00042"	"6/56"	"6"	"56"	"1244427.3883667"	"HCD"	"MS2"	"0"	"94.8"	"100.000"	"30.5887"	"7445"	"7445"	"7418"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"126.2"	""	"119.8"	""	"131.1"	""	"138.0"	"7.0"	"192.9"	"185.1"	""	"493"	"19"	"33.000"	"26.000"	"0.306772851801647"	"18"	"0.009478"	"0.1245"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEASNFR"	"[R].eEASNFR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"541.27728"	"1081.54729"	"1081.54755"	"-0.24"	"-0.00013"	"6/58"	"6"	"58"	"1903488.12768555"	"HCD"	"MS2"	"27.88589"	"154.4"	"100.000"	"26.7253"	"5889"	"5889"	"5866"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"222.8"	""	"235.3"	""	"218.2"	""	"202.9"	""	"289.7"	"294.6"	""	"432"	"24"	"33.000"	"26.000"	"0.0813680205805243"	"17"	"0.007627"	"0.09377"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALDQYR"	"[R].sALDQYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.3929"	"0.0000"	"1"	"1"	"1"	"541.29535"	"1081.58342"	"1081.58394"	"-0.48"	"-0.00026"	"6/58"	"6"	"58"	"7356469.89147949"	"HCD"	"MS2"	"6.495995"	"337.7"	"100.000"	"37.3424"	"10186"	"10186"	"10169"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"516.9"	""	"498.8"	""	"531.6"	""	"447.4"	"9.3"	"577.5"	"614.1"	""	"450"	"28"	"33.000"	"26.000"	"0.0359072808128265"	""	"0.004942"	"0.05362"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALDQYR"	"[R].sALDQYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.0714"	"0.0000"	"1"	"1"	"1"	"541.29547"	"1081.58367"	"1081.58394"	"-0.25"	"-0.00014"	"6/58"	"6"	"58"	"8121759.46472168"	"HCD"	"MS2"	"0"	"364.3"	"100.000"	"37.1737"	"10123"	"10123"	"10104"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"538.5"	""	"547.4"	""	"579.1"	""	"498.9"	"5.6"	"616.6"	"660.8"	""	"450"	"28"	"33.000"	"26.000"	"0.035660096830375"	""	"0.004867"	"0.05123"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITEYAR"	"[R].tITEYAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"541.80524"	"1082.60320"	"1082.60434"	"-1.06"	"-0.00057"	"7/54"	"7"	"54"	"9321152.93133545"	"HCD"	"MS2"	"0"	"327.5"	"86.139"	"39.0488"	"10873"	"10873"	"10853"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"526.4"	""	"479.8"	""	"502.9"	""	"470.1"	"3.4"	"539.9"	"574.4"	""	"362"	"33"	"32.000"	"25.000"	"0.00823528388871588"	"16"	"0.003449"	"0.03465"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITEYAR"	"[R].tITEYAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"541.80548"	"1082.60369"	"1082.60434"	"-0.60"	"-0.00033"	"5/54"	"5"	"54"	"3747923.46661377"	"HCD"	"MS2"	"0"	"162.6"	"100.000"	"39.1401"	"10919"	"10919"	"10899"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"258.9"	""	"234.6"	""	"239.0"	""	"218.7"	"1.3"	"272.9"	"313.4"	""	"365"	"24"	"32.000"	"25.000"	"0.0711644125684691"	"14"	"0.004942"	"0.05291"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITEYAR"	"[R].tITEYAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"541.80548"	"1082.60369"	"1082.60434"	"-0.60"	"-0.00033"	"7/54"	"7"	"54"	"8564972.97955322"	"HCD"	"MS2"	"1.179559"	"368.2"	"100.000"	"38.8454"	"10799"	"10799"	"10780"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"619.8"	"2.8"	"532.8"	""	"549.6"	""	"550.8"	"2.7"	"593.0"	"629.1"	""	"365"	"33"	"32.000"	"25.000"	"0.0082084823518025"	"16"	"0.003111"	"0.03179"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGPLQER"	"[R].gPGPLQER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"541.81171"	"1082.61614"	"1082.61557"	"0.52"	"0.00028"	"5/60"	"5"	"60"	"3647357.71899414"	"HCD"	"MS2"	"14.08957"	"199.4"	"100.000"	"30.4531"	"7389"	"7389"	"7372"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"251.4"	""	"229.2"	""	"209.2"	""	"350.2"	""	"468.2"	"390.5"	""	"323"	"17"	"32.000"	"25.000"	"0.297969990197485"	"16"	"0.004022"	"0.04257"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGPLQER"	"[R].gPGPLQER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"541.81183"	"1082.61638"	"1082.61557"	"0.75"	"0.00040"	"7/60"	"7"	"60"	"4174707.50897217"	"HCD"	"MS2"	"11.05551"	"221.0"	"100.000"	"30.4070"	"7382"	"7382"	"7364"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"272.9"	""	"249.8"	""	"232.0"	""	"383.7"	""	"525.4"	"441.1"	""	"331"	"21"	"32.000"	"25.000"	"0.136394858034652"	"15"	"0.001211"	"0.01447"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APASPAAIR"	"[R].aPASPAAIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R0L4"	"Cullin-associated NEDD8-dissociated protein 2 OS=Rattus norvegicus OX=10116 GN=Cand2 PE=1 SV=1"	"Q9R0L4"	"Cullin-associated NEDD8-dissociated protein 2 OS=Rattus norvegicus OX=10116 GN=Cand2 PE=1 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"541.83038"	"1082.65349"	"1082.65196"	"1.41"	"0.00077"	"8/64"	"8"	"64"	"1327177.31500244"	"HCD"	"MS2"	"46.1548"	"87.8"	"100.000"	"34.8367"	"9168"	"9168"	"9147"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"128.5"	""	"124.0"	""	"106.6"	""	"152.7"	"1.5"	"158.0"	"160.5"	""	"213"	"18"	"30.000"	"23.000"	"0.157162745793883"	"15"	"0.00436"	"0.04626"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"542.26471"	"1083.52214"	"1083.52298"	"-0.77"	"-0.00042"	"6/56"	"6"	"56"	"1101723.48144531"	"HCD"	"MS2"	"2.692782"	"16.5"	"100.000"	"101.4805"	"35455"	"35455"	"35449"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.5"	""	"13.5"	""	"16.8"	""	"32.2"	"0.5"	"43.2"	"37.7"	""	"315"	"55"	"31.000"	"24.000"	"5.43601389453974E-05"	"16"	"0"	"0.003389"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"542.26501"	"1083.52275"	"1083.52298"	"-0.21"	"-0.00011"	"5/56"	"5"	"56"	"215466.797424316"	"HCD"	"MS2"	"25.77418"	"4.9"	"100.000"	"101.2244"	"35373"	"35373"	"35362"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.9"	""	"6.3"	""	"4.7"	""	"8.6"	""	"8.7"	"11.8"	""	"314"	"38"	"31.000"	"24.000"	"0.00269711616783741"	"15"	"0.0006732"	"0.008489"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"542.26508"	"1083.52287"	"1083.52298"	"-0.10"	"-0.00005"	"6/56"	"6"	"56"	"412126.462463379"	"HCD"	"MS2"	"12.12289"	"8.5"	"100.000"	"101.7415"	"35542"	"35542"	"35537"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.6"	""	"10.0"	""	"11.7"	""	"12.4"	""	"18.7"	"22.3"	""	"278"	"58"	"31.000"	"24.000"	"2.01379287642722E-05"	"16"	"0"	"0.003712"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"542.26508"	"1083.52287"	"1083.52298"	"-0.10"	"-0.00005"	"6/56"	"6"	"56"	"399563.751525879"	"HCD"	"MS2"	"13.75813"	"7.8"	"100.000"	"101.6850"	"35571"	"35571"	"35566"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.2"	""	"10.6"	""	"7.9"	""	"15.2"	""	"15.1"	"20.8"	""	"278"	"58"	"31.000"	"24.000"	"2.07021189801817E-05"	"16"	"0.0001301"	"0.003978"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"542.26514"	"1083.52300"	"1083.52298"	"0.02"	"0.00001"	"5/56"	"5"	"56"	"189101.038269043"	"HCD"	"MS2"	"19.08528"	"4.5"	"100.000"	"101.1689"	"35398"	"35398"	"35394"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.3"	""	"3.2"	""	"6.6"	""	"7.1"	""	"7.8"	"14.6"	""	"278"	"40"	"31.000"	"24.000"	"0.00125318388127228"	"15"	"0.0008629"	"0.01075"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.9815"	"0.0000"	"1"	"1"	"1"	"542.26520"	"1083.52312"	"1083.52298"	"0.13"	"0.00007"	"6/56"	"6"	"56"	"1234452.49578857"	"HCD"	"MS2"	"1.84155"	"19.6"	"100.000"	"101.4308"	"35486"	"35486"	"35478"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.3"	""	"21.5"	""	"24.5"	""	"37.2"	"0.6"	"40.0"	"41.0"	""	"278"	"55"	"31.000"	"24.000"	"4.9319061103467E-05"	"17"	"0.0003538"	"0.007198"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGMSR"	"[K].gPSYGMSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"542.27588"	"1083.54448"	"1083.54545"	"-0.89"	"-0.00048"	"5/64"	"5"	"64"	"3621646.04638672"	"HCD"	"MS2"	"5.491849"	"223.3"	"100.000"	"29.9532"	"7186"	"7186"	"7165"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"322.0"	""	"263.9"	""	"232.6"	""	"254.2"	""	"545.3"	"509.6"	""	"280"	"21"	"31.000"	"24.000"	"0.110695007919976"	"16"	"0.0006732"	"0.008953"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGMSR"	"[K].gPSYGMSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"542.27612"	"1083.54497"	"1083.54545"	"-0.44"	"-0.00024"	"7/64"	"7"	"64"	"8988528.41625977"	"HCD"	"MS2"	"7.458925"	"459.5"	"100.000"	"29.6105"	"7059"	"7059"	"7042"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"702.7"	""	"539.6"	""	"483.8"	""	"465.0"	""	"1162.0"	"1022.0"	""	"278"	"28"	"31.000"	"24.000"	"0.0235512954262179"	"20"	"0.0002479"	"0.005963"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGMSR"	"[K].gPSYGMSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"542.27625"	"1083.54521"	"1083.54545"	"-0.21"	"-0.00012"	"6/64"	"6"	"64"	"3532117.18139648"	"HCD"	"MS2"	"9.017458"	"217.7"	"100.000"	"29.9298"	"7188"	"7188"	"7169"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"312.1"	""	"264.6"	""	"245.1"	""	"248.4"	""	"514.5"	"492.0"	""	"278"	"20"	"31.000"	"24.000"	"0.144882122685669"	"15"	"0.004938"	"0.05256"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGMSR"	"[K].gPSYGMSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"542.27637"	"1083.54546"	"1083.54545"	"0.01"	"0.00001"	"7/64"	"7"	"64"	"7313353.65014648"	"HCD"	"MS2"	"10.15669"	"401.2"	"100.000"	"29.6292"	"7054"	"7054"	"7036"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"616.1"	""	"463.6"	""	"419.4"	""	"395.5"	"3.9"	"1037.0"	"883.3"	""	"278"	"27"	"31.000"	"24.000"	"0.026792596293354"	"18"	"0.0002479"	"0.005086"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGNIAVPR"	"[R].aGGNIAVPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7255"	"0.0000"	"1"	"1"	"1"	"542.32697"	"1083.64665"	"1083.64721"	"-0.51"	"-0.00028"	"8/76"	"8"	"76"	"45243216.0155029"	"HCD"	"MS2"	"1.19984"	"585.5"	"32.111"	"37.8238"	"10377"	"10377"	"10369"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"692.5"	""	"761.2"	""	"1020.5"	""	"871.6"	""	"997.2"	"1211.1"	""	"211"	"51"	"30.000"	"23.000"	"7.53793624009667E-05"	""	"0"	"0.000435"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGNIAVPR"	"[R].aGGNIAVPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"542.32715"	"1083.64702"	"1083.64721"	"-0.17"	"-0.00009"	"7/76"	"7"	"76"	"4775660.00299072"	"HCD"	"MS2"	"36.13012"	"219.1"	"100.000"	"37.5510"	"10269"	"10269"	"10262"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"259.4"	""	"287.5"	""	"323.3"	""	"319.5"	""	"425.8"	"470.7"	""	"211"	"28"	"30.000"	"23.000"	"0.0184608825649901"	"23"	"0"	"0.001457"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGNIAVPR"	"[R].aGGNIAVPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"542.32715"	"1083.64702"	"1083.64721"	"-0.17"	"-0.00009"	"7/76"	"7"	"76"	"9135770.94335938"	"HCD"	"MS2"	"29.2184"	"368.8"	"100.000"	"37.3960"	"10212"	"10212"	"10199"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"450.1"	""	"469.4"	""	"586.9"	""	"593.8"	""	"676.3"	"725.3"	""	"211"	"39"	"30.000"	"23.000"	"0.00141988267352903"	""	"0"	"0.0002763"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGNIAVPR"	"[R].aGGNIAVPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7255"	"0.0000"	"1"	"1"	"1"	"542.32715"	"1083.64702"	"1083.64721"	"-0.17"	"-0.00009"	"8/76"	"8"	"76"	"35267943.6108398"	"HCD"	"MS2"	"1.359786"	"601.1"	"44.714"	"37.6825"	"10325"	"10325"	"10315"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"715.1"	""	"778.8"	""	"1045.5"	""	"862.2"	""	"1026.5"	"1277.1"	""	"211"	"51"	"30.000"	"23.000"	"7.55531297774611E-05"	""	"0"	"0.0006382"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGNIAVPR"	"[R].aGGNIAVPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"542.32721"	"1083.64714"	"1083.64721"	"-0.06"	"-0.00003"	"8/76"	"8"	"76"	"2475455.62774658"	"HCD"	"MS2"	"3.174551"	"103.5"	"100.000"	"37.9925"	"10451"	"10451"	"10430"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"119.9"	""	"142.3"	""	"173.3"	""	"146.6"	""	"185.0"	"222.1"	""	"211"	"37"	"30.000"	"23.000"	"0.00198724978941174"	""	"0"	"0.0005103"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGNIAVPR"	"[R].aGGNIAVPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"361.88757"	"1083.64817"	"1083.64721"	"0.88"	"0.00032"	"9/76"	"9"	"76"	"1382185.89892578"	"HCD"	"MS2"	"41.44922"	"56.4"	"100.000"	"37.8190"	"10375"	"10375"	"10354"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"64.9"	""	"74.7"	""	"86.7"	""	"103.5"	"0.4"	"107.5"	"96.9"	""	"208"	"32"	"30.000"	"23.000"	"0.00719504209755694"	"22"	"0"	"0.002785"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGNIAVPR"	"[R].aGGNIAVPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"542.32813"	"1083.64897"	"1083.64721"	"1.63"	"0.00088"	"8/76"	"8"	"76"	"3426667.72766113"	"HCD"	"MS2"	"5.297209"	"144.4"	"100.000"	"38.1472"	"10506"	"10506"	"10487"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"181.8"	"2.7"	"172.2"	""	"238.8"	""	"207.8"	""	"262.4"	"308.1"	""	"184"	"44"	"29.000"	"22.000"	"0.000377387774747679"	""	"0"	"0.0004066"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYAMNNI"	"[R].lYAmnNI.[-]"	"N-Term(TMT6plex); M4(Oxidation); N5(Deamidated)"	"1"	"1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"0"	"2"	"2"	"0.2593"	"0.0000"	"1"	"1"	"1"	"542.78174"	"1084.55620"	"1084.55461"	"1.46"	"0.00079"	"6/52"	"6"	"52"	"396338.331481934"	"HCD"	"MS2"	"11.22931"	"15.6"	"100.000"	"76.5475"	"26087"	"26087"	"26056"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.3"	""	"20.1"	""	"15.9"	""	"33.0"	""	"26.4"	"30.0"	""	"333"	"27"	"32.000"	"25.000"	"0.0371034452353505"	"20"	"0.008522"	"0.1059"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYAMNNI"	"[R].lYAmnNI.[-]"	"N-Term(TMT6plex); M4(Oxidation); N5(Deamidated)"	"1"	"1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"0"	"2"	"2"	"0.4074"	"0.0000"	"1"	"1"	"1"	"542.78198"	"1084.55669"	"1084.55461"	"1.91"	"0.00104"	"6/52"	"6"	"52"	"313687.013244629"	"HCD"	"MS2"	"16.75081"	"12.6"	"100.000"	"76.3871"	"26030"	"26030"	"26003"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.5"	""	"13.6"	""	"16.1"	""	"28.5"	""	"22.8"	"21.5"	""	"333"	"27"	"32.000"	"25.000"	"0.0362588677096801"	"14"	"0.009417"	"0.1235"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GANPVEIR"	"[K].gANPVEIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"542.81830"	"1084.62932"	"1084.63122"	"-1.76"	"-0.00095"	"5/66"	"5"	"66"	"10150599.2805176"	"HCD"	"MS2"	"0"	"379.9"	"100.000"	"36.0568"	"9669"	"9669"	"9656"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"584.8"	"3.6"	"509.7"	""	"558.4"	""	"655.8"	""	"667.2"	"620.0"	""	"303"	"40"	"31.000"	"24.000"	"0.00135960462366863"	""	"0"	"0.003571"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GANPVEIR"	"[K].gANPVEIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6591"	"0.0000"	"1"	"1"	"1"	"542.81879"	"1084.63030"	"1084.63122"	"-0.85"	"-0.00046"	"5/66"	"5"	"66"	"9840482.61358643"	"HCD"	"MS2"	"0"	"362.9"	"100.000"	"36.2052"	"9723"	"9723"	"9709"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"568.8"	""	"469.3"	""	"541.0"	""	"598.7"	""	"641.9"	"617.2"	""	"303"	"44"	"31.000"	"24.000"	"0.000588047804475833"	""	"0"	"0.001688"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GANPVEIR"	"[K].gANPVEIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6591"	"0.0000"	"1"	"1"	"1"	"542.81915"	"1084.63103"	"1084.63122"	"-0.18"	"-0.00010"	"5/66"	"5"	"66"	"11344350.7024536"	"HCD"	"MS2"	"0"	"418.7"	"100.000"	"36.3394"	"9784"	"9784"	"9773"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"635.1"	""	"569.6"	""	"619.2"	""	"688.5"	""	"723.0"	"733.9"	""	"302"	"44"	"31.000"	"24.000"	"0.00059563052613367"	""	"0"	"0.001643"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GANPVEIR"	"[K].gANPVEIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6591"	"0.0000"	"1"	"1"	"1"	"542.81946"	"1084.63164"	"1084.63122"	"0.38"	"0.00021"	"5/66"	"5"	"66"	"12661828.8937988"	"HCD"	"MS2"	"0"	"472.9"	"95.008"	"36.4760"	"9833"	"9833"	"9819"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"717.6"	""	"610.3"	""	"697.3"	""	"802.7"	"0.1"	"840.0"	"807.4"	""	"298"	"44"	"31.000"	"24.000"	"0.000575686795810562"	""	"0"	"0.002588"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAEVLNIGR"	"[M].aTAEVLNIGR.[K]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"543.30078"	"1085.59429"	"1085.59495"	"-0.61"	"-0.00033"	"7/82"	"7"	"82"	"535638.974182129"	"HCD"	"MS2"	"18.96084"	"10.1"	"100.000"	"83.4107"	"28842"	"28842"	"28831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.5"	""	"14.5"	""	"12.4"	""	"17.7"	""	"17.4"	"19.9"	"NoQuanLabels"	"334"	"44"	"32.000"	"25.000"	"0.000740826435365493"	"19"	"0"	"0.001228"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAEVLNIGR"	"[M].aTAEVLNIGR.[K]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"0"	"2"	"2"	"0.8806"	"0.0000"	"1"	"1"	"1"	"543.30084"	"1085.59441"	"1085.59495"	"-0.50"	"-0.00027"	"8/82"	"8"	"82"	"1572036.01153564"	"HCD"	"MS2"	"3.492298"	"8.6"	"100.000"	"83.7217"	"28967"	"28967"	"28957"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.9"	""	"9.7"	""	"11.9"	""	"18.2"	""	"17.1"	"15.2"	"NoQuanLabels"	"336"	"67"	"32.000"	"25.000"	"3.65013798049109E-06"	"25"	"0"	"0.0001066"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAEVLNIGR"	"[M].aTAEVLNIGR.[K]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"0"	"2"	"2"	"0.8841"	"0.0000"	"1"	"1"	"1"	"543.30084"	"1085.59441"	"1085.59495"	"-0.50"	"-0.00027"	"7/82"	"7"	"82"	"1720535.10839844"	"HCD"	"MS2"	"0.6977953"	"7.5"	"100.000"	"83.6750"	"28946"	"28946"	"28935"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.7"	""	"11.5"	""	"12.1"	""	"14.5"	""	"14.5"	"12.0"	"NoQuanLabels"	"336"	"69"	"32.000"	"25.000"	"1.94674595834061E-06"	"25"	"0"	"0.0001204"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAEVLNIGR"	"[M].aTAEVLNIGR.[K]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"0"	"2"	"2"	"0.9016"	"0.0000"	"1"	"1"	"1"	"543.30109"	"1085.59490"	"1085.59495"	"-0.05"	"-0.00003"	"9/82"	"9"	"82"	"606206.21862793"	"HCD"	"MS2"	"24.57805"	"10.3"	"100.000"	"83.4437"	"28857"	"28857"	"28845"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.1"	""	"12.0"	""	"12.4"	""	"18.0"	""	"23.7"	"20.2"	"NoQuanLabels"	"337"	"61"	"32.000"	"25.000"	"1.24050895927863E-05"	"22"	"0"	"0.0001708"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIIDLVLDR"	"[K].EIIDLVLDR.[I]"	""	"1"	"3"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"3"	"543.31293"	"1085.61858"	"1085.62010"	"-1.40"	"-0.00076"	"4/78"	"4"	"78"	"196429.689697266"	"HCD"	"MS2"	"100"	"6.0"	"100.000"	"94.8724"	"33252"	"33252"	"33241"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.7"	""	"8.7"	""	"6.8"	""	"11.8"	""	"10.9"	"13.4"	"NoQuanLabels"	"356"	"17"	"32.000"	"25.000"	"0.337613653975584"	"19"	"0.004867"	"0.05196"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVAPIER"	"[K].tAVAPIER.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"543.32892"	"1085.65056"	"1085.65162"	"-0.98"	"-0.00053"	"6/68"	"6"	"68"	"12565653.7860718"	"HCD"	"MS2"	"0"	"488.7"	"100.000"	"35.7122"	"9524"	"9524"	"9514"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"500.6"	""	"652.7"	""	"657.2"	""	"844.9"	""	"943.2"	"1054.0"	""	"355"	"43"	"32.000"	"25.000"	"0.000837911898242873"	""	"0"	"0.003073"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVAPIER"	"[K].tAVAPIER.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"543.32904"	"1085.65080"	"1085.65162"	"-0.76"	"-0.00041"	"6/68"	"6"	"68"	"20223377.6621094"	"HCD"	"MS2"	"0"	"438.4"	"61.077"	"35.8389"	"9580"	"9580"	"9562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"421.5"	""	"593.1"	""	"600.3"	""	"772.5"	""	"868.6"	"915.0"	""	"355"	"46"	"32.000"	"25.000"	"0.000459407792439674"	""	"0"	"0.002975"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVAPIER"	"[K].tAVAPIER.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"543.32922"	"1085.65117"	"1085.65162"	"-0.42"	"-0.00023"	"6/68"	"6"	"68"	"13260022.1711426"	"HCD"	"MS2"	"0"	"297.8"	"57.833"	"36.0127"	"9646"	"9646"	"9627"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"295.1"	""	"389.5"	""	"386.7"	""	"515.8"	""	"587.1"	"658.5"	""	"355"	"46"	"32.000"	"25.000"	"0.00046472748395887"	""	"0"	"0.001615"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVAPIER"	"[K].tAVAPIER.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"543.32928"	"1085.65129"	"1085.65162"	"-0.31"	"-0.00017"	"6/68"	"6"	"68"	"8023410.25366211"	"HCD"	"MS2"	"9.074661"	"319.2"	"100.000"	"35.5407"	"9459"	"9459"	"9447"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"340.2"	""	"422.9"	""	"425.2"	""	"566.0"	""	"589.0"	"690.4"	""	"355"	"46"	"32.000"	"25.000"	"0.000496819184235099"	""	"0"	"0.002109"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDVNLAPLR"	"[-].mDVNLAPLR.[A]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"Q9ES40"	"PRA1 family protein 3 OS=Rattus norvegicus OX=10116 GN=Arl6ip5 PE=1 SV=1"	"Q9ES40"	"PRA1 family protein 3 OS=Rattus norvegicus OX=10116 GN=Arl6ip5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"543.78418"	"1086.56108"	"1086.56121"	"-0.11"	"-0.00006"	"7/74"	"7"	"74"	"690320.930175781"	"HCD"	"MS2"	"34.74522"	"17.9"	"100.000"	"74.5775"	"25305"	"25305"	"25286"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.7"	""	"22.1"	""	"22.9"	""	"33.4"	"1.6"	"29.4"	"37.0"	"NoQuanLabels"	"340"	"19"	"32.000"	"25.000"	"0.236836656500702"	"14"	"0.003449"	"0.03309"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDVNLAPLR"	"[-].mDVNLAPLR.[A]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"Q9ES40"	"PRA1 family protein 3 OS=Rattus norvegicus OX=10116 GN=Arl6ip5 PE=1 SV=1"	"Q9ES40"	"PRA1 family protein 3 OS=Rattus norvegicus OX=10116 GN=Arl6ip5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"543.78448"	"1086.56169"	"1086.56121"	"0.45"	"0.00024"	"6/74"	"6"	"74"	"868598.890319824"	"HCD"	"MS2"	"25.37562"	"20.5"	"100.000"	"74.7886"	"25377"	"25377"	"25359"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.7"	""	"19.6"	""	"33.1"	""	"36.8"	"0.5"	"34.0"	"37.9"	"NoQuanLabels"	"340"	"18"	"32.000"	"25.000"	"0.241239778687146"	"14"	"0.00344"	"0.03238"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDVNLAPLR"	"[-].mDVNLAPLR.[A]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"Q9ES40"	"PRA1 family protein 3 OS=Rattus norvegicus OX=10116 GN=Arl6ip5 PE=1 SV=1"	"Q9ES40"	"PRA1 family protein 3 OS=Rattus norvegicus OX=10116 GN=Arl6ip5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"543.78455"	"1086.56182"	"1086.56121"	"0.56"	"0.00030"	"5/74"	"5"	"74"	"251416.176147461"	"HCD"	"MS2"	"32.01105"	"10.9"	"100.000"	"87.9287"	"30618"	"30618"	"30599"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.0"	""	"12.1"	""	"13.0"	""	"20.6"	""	"20.2"	"21.3"	"NoQuanLabels"	"336"	"8"	"32.000"	"25.000"	"2.83994076516068"	"13"	"0.00912"	"0.1174"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GHLDYPR"	"[R].gHLDYPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P28494"	"Alpha-mannosidase 2 OS=Rattus norvegicus OX=10116 GN=Man2a1 PE=1 SV=2"	"P28494"	"Alpha-mannosidase 2 OS=Rattus norvegicus OX=10116 GN=Man2a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"362.86786"	"1086.58902"	"1086.58936"	"-0.31"	"-0.00011"	"5/48"	"5"	"48"	"2613148.784729"	"HCD"	"MS2"	"11.65612"	"83.6"	"100.000"	"27.7513"	"6290"	"6290"	"6262"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.1"	""	"95.9"	""	"112.4"	""	"129.5"	"6.2"	"194.5"	"151.9"	""	"452"	"20"	"33.000"	"26.000"	"0.212867048814162"	"14"	"0.005427"	"0.06167"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPVELTG"	"[R].eLPVELTG.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"543.81549"	"1086.62370"	"1086.62441"	"-0.65"	"-0.00035"	"5/70"	"5"	"70"	"278087.635437012"	"HCD"	"MS2"	"49.98494"	"7.8"	"100.000"	"95.6741"	"33562"	"33562"	"33549"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.3"	""	"9.8"	""	"9.4"	""	"12.2"	""	"14.1"	"19.4"	""	"418"	"8"	"33.000"	"26.000"	"3.69101904523408"	"19"	"0.007476"	"0.08929"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQEAAGR"	"[K].lIQEAAGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"0"	"2"	"2"	"0.3235"	"0.0000"	"1"	"1"	"1"	"543.82635"	"1086.64543"	"1086.64687"	"-1.33"	"-0.00072"	"6/66"	"6"	"66"	"4256931.67681885"	"HCD"	"MS2"	"10.41969"	"176.3"	"100.000"	"42.1877"	"12160"	"12160"	"12140"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"273.6"	""	"225.3"	""	"240.3"	""	"294.7"	"1.4"	"318.6"	"315.9"	""	"401"	"34"	"33.000"	"26.000"	"0.00750091729485466"	""	"0.0001301"	"0.003834"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQEAAGR"	"[K].lIQEAAGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"0"	"2"	"2"	"0.3939"	"0.0000"	"1"	"1"	"1"	"543.82684"	"1086.64641"	"1086.64687"	"-0.43"	"-0.00023"	"6/66"	"6"	"66"	"3945737.87133789"	"HCD"	"MS2"	"0"	"170.4"	"100.000"	"42.2893"	"12191"	"12191"	"12175"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"260.4"	""	"218.0"	""	"249.4"	""	"268.1"	""	"303.1"	"315.7"	""	"397"	"33"	"32.000"	"25.000"	"0.0102981807727399"	""	"0.0001301"	"0.003813"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVPDPSTR"	"[R].sVPDPSTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"544.29938"	"1087.59148"	"1087.59450"	"-2.78"	"-0.00151"	"5/68"	"5"	"68"	"4935207.46759033"	"HCD"	"MS2"	"11.43275"	"199.3"	"100.000"	"29.1511"	"6873"	"6873"	"6848"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"256.5"	""	"235.2"	""	"246.7"	""	"364.0"	""	"389.1"	"401.9"	""	"563"	"14"	"34.000"	"27.000"	"1.07270029285347"	"20"	"0.004069"	"0.04475"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVPDPSTR"	"[R].sVPDPSTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"544.30011"	"1087.59294"	"1087.59450"	"-1.44"	"-0.00078"	"7/68"	"7"	"68"	"5042618.20397949"	"HCD"	"MS2"	"11.58351"	"200.8"	"100.000"	"29.2114"	"6885"	"6885"	"6859"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"233.9"	""	"234.1"	""	"251.3"	""	"353.9"	""	"417.2"	"421.2"	""	"572"	"22"	"34.000"	"27.000"	"0.166098623411095"	"23"	"0.003507"	"0.03622"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPTDEAR"	"[R].aVPTDEAR.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.0625"	"0.0000"	"1"	"1"	"1"	"544.30084"	"1087.59441"	"1087.59450"	"-0.09"	"-0.00005"	"5/60"	"5"	"60"	"6336366.55969238"	"HCD"	"MS2"	"2.599428"	"247.1"	"100.000"	"26.5101"	"5785"	"5785"	"5763"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"292.2"	""	"303.2"	""	"310.6"	""	"452.3"	"6.8"	"480.4"	"500.0"	""	"566"	"32"	"34.000"	"27.000"	"0.0171706381273547"	""	"0.0002479"	"0.005163"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIVENR"	"[R].iDIVENR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"3"	"544.31812"	"1087.62895"	"1087.63089"	"-1.78"	"-0.00097"	"4/56"	"4"	"56"	"1725332.05834961"	"HCD"	"MS2"	"0"	"78.4"	"100.000"	"55.0441"	"17378"	"17378"	"17361"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"135.6"	""	"92.5"	""	"91.4"	""	"133.8"	""	"143.4"	"150.9"	""	"640"	"27"	"35.000"	"28.000"	"0.0570361205583388"	"18"	"0.004431"	"0.04633"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIVENR"	"[R].iDIVENR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"544.31830"	"1087.62932"	"1087.63089"	"-1.44"	"-0.00078"	"5/56"	"5"	"56"	"1849802.62658691"	"HCD"	"MS2"	"17.44831"	"85.5"	"100.000"	"54.8233"	"17302"	"17302"	"17284"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"142.1"	""	"107.2"	""	"91.1"	""	"142.7"	""	"166.9"	"167.0"	""	"642"	"26"	"35.000"	"28.000"	"0.0775362927856825"	"19"	"0.004022"	"0.04266"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIVENR"	"[R].iDIVENR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"544.31854"	"1087.62981"	"1087.63089"	"-0.99"	"-0.00054"	"5/56"	"5"	"56"	"4240511.87420654"	"HCD"	"MS2"	"0"	"178.9"	"100.000"	"55.3313"	"17496"	"17496"	"17479"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"293.0"	""	"215.1"	""	"212.5"	""	"304.8"	""	"323.6"	"345.5"	""	"641"	"29"	"35.000"	"28.000"	"0.0448567736884525"	"20"	"0.004022"	"0.04313"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIVENR"	"[R].iDIVENR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"544.31860"	"1087.62993"	"1087.63089"	"-0.88"	"-0.00048"	"5/56"	"5"	"56"	"4594396.37536621"	"HCD"	"MS2"	"1.076302"	"183.6"	"100.000"	"55.1081"	"17418"	"17418"	"17400"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"312.6"	""	"214.0"	""	"225.6"	""	"305.9"	""	"336.3"	"348.0"	""	"641"	"27"	"35.000"	"28.000"	"0.0605101227385363"	"19"	"0.00447"	"0.04696"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEVDNR"	"[R].lLEVDNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"544.31879"	"1087.63030"	"1087.63089"	"-0.54"	"-0.00030"	"5/54"	"5"	"54"	"9665980.48394775"	"HCD"	"MS2"	"0.3568803"	"369.7"	"100.000"	"53.1909"	"16628"	"16628"	"16611"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"382.0"	""	"430.6"	""	"402.9"	""	"640.1"	""	"797.7"	"870.8"	""	"641"	"24"	"35.000"	"28.000"	"0.124402192300003"	""	"0.007018"	"0.08178"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDLVNR"	"[K].eIDLVNR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P51638; P41350"	"Caveolin-3 OS=Rattus norvegicus OX=10116 GN=Cav3 PE=1 SV=1; Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.2692"	"0.0000"	"1"	"1"	"1"	"544.31885"	"1087.63042"	"1087.63089"	"-0.43"	"-0.00024"	"6/54"	"6"	"54"	"3534076.02423096"	"HCD"	"MS2"	"6.878924"	"153.5"	"100.000"	"52.5854"	"16380"	"16380"	"16361"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"79.9"	""	"99.7"	""	"83.2"	""	"335.9"	""	"418.0"	"452.1"	""	"641"	"26"	"35.000"	"28.000"	"0.0808775587580024"	""	"0.003967"	"0.04123"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDLVNR"	"[K].eIDLVNR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P51638; P41350"	"Caveolin-3 OS=Rattus norvegicus OX=10116 GN=Cav3 PE=1 SV=1; Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"544.31891"	"1087.63054"	"1087.63089"	"-0.32"	"-0.00017"	"5/54"	"5"	"54"	"5128169.86785889"	"HCD"	"MS2"	"1.320975"	"209.9"	"100.000"	"52.3315"	"16288"	"16288"	"16267"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"116.4"	""	"141.5"	""	"108.4"	""	"473.5"	""	"575.8"	"594.3"	""	"641"	"27"	"35.000"	"28.000"	"0.05899674264708"	""	"0.004942"	"0.05475"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEVDNR"	"[R].lLEVDNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"544.31891"	"1087.63054"	"1087.63089"	"-0.32"	"-0.00017"	"5/54"	"5"	"54"	"9815919.61663818"	"HCD"	"MS2"	"0"	"387.8"	"100.000"	"52.9276"	"16531"	"16531"	"16513"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"389.1"	""	"430.6"	""	"453.7"	""	"658.8"	""	"812.8"	"948.3"	""	"641"	"24"	"35.000"	"28.000"	"0.123830616145829"	""	"0.006769"	"0.07913"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEQAIR"	"[R].eLEQAIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z0W5"	"Protein kinase C and casein kinase substrate in neurons protein 1 OS=Rattus norvegicus OX=10116 GN=Pacsin1 PE=1 SV=1"	"Q9Z0W5"	"Protein kinase C and casein kinase substrate in neurons protein 1 OS=Rattus norvegicus OX=10116 GN=Pacsin1 PE=1 SV=1"	"0"	"2"	"2"	"0.3448"	"0.0000"	"1"	"1"	"1"	"544.31897"	"1087.63066"	"1087.63089"	"-0.21"	"-0.00011"	"6/58"	"6"	"58"	"3530486.70452881"	"HCD"	"MS2"	"5.542743"	"145.3"	"100.000"	"46.1202"	"13757"	"13757"	"13737"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"168.9"	""	"243.7"	""	"188.8"	""	"199.1"	"0.1"	"305.7"	"272.5"	""	"641"	"29"	"35.000"	"28.000"	"0.0447536059718428"	""	"0.008668"	"0.1083"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEALER"	"[R].lQEALER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"0"	"2"	"2"	"0.1200"	"0.0000"	"1"	"1"	"1"	"544.31903"	"1087.63078"	"1087.63089"	"-0.10"	"-0.00005"	"5/64"	"5"	"64"	"2404394.77929688"	"HCD"	"MS2"	"25.46009"	"110.7"	"100.000"	"49.1664"	"14998"	"14998"	"14976"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"136.0"	""	"93.0"	""	"144.3"	""	"225.6"	""	"242.7"	"210.3"	""	"641"	"25"	"35.000"	"28.000"	"0.0961231587335543"	""	"0.003449"	"0.03561"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDLVNR"	"[K].eIDLVNR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P51638; P41350"	"Caveolin-3 OS=Rattus norvegicus OX=10116 GN=Cav3 PE=1 SV=1; Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.3448"	"0.0000"	"1"	"1"	"1"	"544.31903"	"1087.63078"	"1087.63089"	"-0.10"	"-0.00005"	"5/54"	"5"	"54"	"37024954.9768066"	"HCD"	"MS2"	"0"	"480.1"	"33.356"	"52.8824"	"16502"	"16502"	"16487"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"251.2"	""	"269.8"	""	"243.4"	""	"992.1"	""	"1397.9"	"1454.3"	""	"641"	"29"	"35.000"	"28.000"	"0.0415745956350358"	""	"0.005001"	"0.05698"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDLVNR"	"[K].eIDLVNR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P51638; P41350"	"Caveolin-3 OS=Rattus norvegicus OX=10116 GN=Cav3 PE=1 SV=1; Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.3448"	"0.0000"	"1"	"1"	"1"	"544.31921"	"1087.63115"	"1087.63089"	"0.24"	"0.00013"	"5/54"	"5"	"54"	"37261287.9257813"	"HCD"	"MS2"	"0"	"508.6"	"35.565"	"52.6305"	"16410"	"16410"	"16392"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"256.6"	""	"270.2"	""	"241.3"	""	"1059.7"	""	"1477.2"	"1582.3"	""	"641"	"29"	"35.000"	"28.000"	"0.0417664952493962"	""	"0.005067"	"0.05733"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPSAVSR"	"[R].eLPSAVSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"544.31934"	"1087.63140"	"1087.63089"	"0.47"	"0.00025"	"5/68"	"5"	"68"	"2383335.63690186"	"HCD"	"MS2"	"0"	"105.4"	"100.000"	"41.0553"	"11690"	"11690"	"11670"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"157.7"	""	"137.3"	""	"126.3"	""	"185.7"	"1.6"	"192.7"	"197.6"	""	"641"	"26"	"35.000"	"28.000"	"0.0858673448104501"	""	"0.0003538"	"0.007112"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEALER"	"[R].lQEALER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"0"	"2"	"2"	"0.2083"	"0.0000"	"1"	"1"	"1"	"544.31934"	"1087.63140"	"1087.63089"	"0.47"	"0.00025"	"5/64"	"5"	"64"	"2898997.90704346"	"HCD"	"MS2"	"18.76213"	"129.8"	"100.000"	"49.5474"	"15141"	"15141"	"15121"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"143.6"	""	"119.4"	""	"166.7"	""	"273.1"	""	"280.2"	"251.9"	""	"641"	"24"	"35.000"	"28.000"	"0.128477782999551"	""	"0.004942"	"0.05537"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSTVSLPR"	"[R].vSTVSLPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P08426"	"Cationic trypsin-3 OS=Rattus norvegicus OX=10116 GN=Try3 PE=2 SV=1"	"P08426"	"Cationic trypsin-3 OS=Rattus norvegicus OX=10116 GN=Try3 PE=2 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"544.33698"	"1087.66667"	"1087.66727"	"-0.55"	"-0.00030"	"9/62"	"9"	"62"	"1071651.47021484"	"HCD"	"MS2"	"8.788982"	"47.2"	"100.000"	"71.6299"	"24093"	"24093"	"24072"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.5"	""	"72.7"	""	"84.8"	""	"60.9"	""	"65.5"	"86.9"	""	"689"	"12"	"35.000"	"28.000"	"2.07104352562989"	"20"	"0.008478"	"0.1028"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGGLGPSDR"	"[R].tGGLGPSDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63767"	"Breast cancer anti-estrogen resistance protein 1 OS=Rattus norvegicus OX=10116 GN=Bcar1 PE=1 SV=1"	"Q63767"	"Breast cancer anti-estrogen resistance protein 1 OS=Rattus norvegicus OX=10116 GN=Bcar1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"544.79657"	"1088.58586"	"1088.58975"	"-3.57"	"-0.00194"	"8/78"	"8"	"78"	"2737154.76733398"	"HCD"	"MS2"	"39.40717"	"156.7"	"100.000"	"27.1175"	"6048"	"6048"	"6030"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"231.3"	""	"225.8"	""	"233.7"	""	"239.3"	""	"269.2"	"285.4"	""	"581"	"30"	"34.000"	"27.000"	"0.0265549896647108"	"24"	"0.000936"	"0.01261"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGGLGPSDR"	"[R].tGGLGPSDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63767"	"Breast cancer anti-estrogen resistance protein 1 OS=Rattus norvegicus OX=10116 GN=Bcar1 PE=1 SV=1"	"Q63767"	"Breast cancer anti-estrogen resistance protein 1 OS=Rattus norvegicus OX=10116 GN=Bcar1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"544.79755"	"1088.58782"	"1088.58975"	"-1.78"	"-0.00097"	"7/78"	"7"	"78"	"1861484.06585693"	"HCD"	"MS2"	"35.4866"	"119.8"	"100.000"	"27.2510"	"6087"	"6087"	"6063"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"187.3"	""	"175.9"	""	"174.6"	""	"202.3"	""	"190.9"	"203.0"	""	"585"	"24"	"34.000"	"27.000"	"0.108924574079461"	"20"	"0.001374"	"0.01755"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVEENVR"	"[K].nVEENVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"544.79803"	"1088.58879"	"1088.58975"	"-0.88"	"-0.00048"	"6/62"	"6"	"62"	"5535307.77020264"	"HCD"	"MS2"	"0"	"266.4"	"100.000"	"24.7586"	"5093"	"5093"	"5071"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"524.9"	""	"411.9"	""	"297.6"	""	"431.2"	"3.9"	"439.8"	"408.4"	""	"601"	"36"	"34.000"	"27.000"	"0.00685242792636125"	"23"	"0.003449"	"0.03295"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVEENVR"	"[K].nVEENVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"544.79810"	"1088.58891"	"1088.58975"	"-0.77"	"-0.00042"	"6/62"	"6"	"62"	"6215118.09869385"	"HCD"	"MS2"	"0"	"293.7"	"100.000"	"24.8302"	"5106"	"5106"	"5089"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"578.7"	""	"498.5"	""	"298.2"	""	"493.6"	"2.2"	"462.7"	"440.7"	""	"602"	"36"	"34.000"	"27.000"	"0.00680090166836513"	"22"	"0.003358"	"0.03235"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VANEITVN"	"[R].vANEITVN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"0"	"2"	"2"	"0.6098"	"0.0000"	"1"	"1"	"1"	"544.81018"	"1088.61308"	"1088.61490"	"-1.67"	"-0.00091"	"6/70"	"6"	"70"	"5294157.86444092"	"HCD"	"MS2"	"9.617111"	"73.5"	"100.000"	"59.5207"	"19219"	"19219"	"19206"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.6"	"2.0"	"59.2"	""	"69.6"	""	"149.2"	"1.1"	"166.6"	"182.3"	""	"732"	"41"	"35.000"	"28.000"	"0.00321722241160103"	""	"0.002973"	"0.02877"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VANEITVN"	"[R].vANEITVN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"0"	"2"	"2"	"0.5122"	"0.0000"	"1"	"1"	"1"	"544.81030"	"1088.61333"	"1088.61490"	"-1.45"	"-0.00079"	"6/70"	"6"	"70"	"4815470.59051514"	"HCD"	"MS2"	"7.828402"	"66.2"	"100.000"	"59.7620"	"19303"	"19303"	"19286"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"74.1"	""	"56.9"	""	"77.9"	""	"116.8"	""	"151.6"	"153.7"	""	"735"	"41"	"35.000"	"28.000"	"0.00325279986612832"	""	"0.003111"	"0.03186"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSSPVNVK"	"[M].sSSPVNVk.[K]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"544.81036"	"1088.61345"	"1088.61491"	"-1.34"	"-0.00073"	"6/64"	"6"	"64"	"1663071.55505371"	"HCD"	"MS2"	"34.53214"	"64.3"	"100.000"	"45.5098"	"13497"	"13497"	"13478"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.8"	""	"74.1"	""	"80.0"	""	"107.5"	"1.0"	"132.0"	"127.5"	""	"735"	"48"	"35.000"	"28.000"	"0.000570502226159595"	"22"	"0.001374"	"0.01736"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQAPAVATT"	"[R].tQAPAVATT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"544.81055"	"1088.61382"	"1088.61490"	"-1.00"	"-0.00054"	"5/80"	"5"	"80"	"2366039.40185547"	"HCD"	"MS2"	"30.05149"	"99.4"	"100.000"	"38.6592"	"10723"	"10723"	"10704"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"125.5"	""	"124.9"	""	"144.0"	""	"173.6"	"2.7"	"175.8"	"195.7"	""	"734"	"35"	"35.000"	"28.000"	"0.0123784442277805"	""	"0.0006732"	"0.008761"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQAPAVATT"	"[R].tQAPAVATT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"544.81079"	"1088.61431"	"1088.61490"	"-0.55"	"-0.00030"	"5/80"	"5"	"80"	"5591380.96777344"	"HCD"	"MS2"	"17.10956"	"105.8"	"100.000"	"38.5725"	"10679"	"10679"	"10661"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"155.3"	""	"127.7"	""	"144.8"	""	"178.1"	"8.4"	"191.7"	"196.0"	""	"737"	"39"	"35.000"	"28.000"	"0.00508671601506163"	"23"	"0"	"0.001847"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VANEITVN"	"[R].vANEITVN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"0"	"2"	"2"	"0.6585"	"0.0000"	"1"	"1"	"1"	"544.81091"	"1088.61455"	"1088.61490"	"-0.33"	"-0.00018"	"6/70"	"6"	"70"	"1350249.31512451"	"HCD"	"MS2"	"27.56635"	"27.0"	"100.000"	"59.4558"	"19177"	"19177"	"19158"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.0"	""	"27.8"	""	"30.4"	""	"44.6"	"1.5"	"58.0"	"62.8"	""	"737"	"41"	"35.000"	"28.000"	"0.00288693823359349"	""	"0.0006732"	"0.00909"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VANEITVN"	"[R].vANEITVN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"0"	"2"	"2"	"0.6757"	"0.0000"	"1"	"1"	"1"	"544.81097"	"1088.61467"	"1088.61490"	"-0.21"	"-0.00012"	"6/70"	"6"	"70"	"1407873.95831299"	"HCD"	"MS2"	"7.904592"	"27.1"	"100.000"	"59.2307"	"19100"	"19100"	"19085"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.5"	""	"27.3"	""	"30.5"	""	"45.3"	""	"59.4"	"65.5"	""	"737"	"37"	"35.000"	"28.000"	"0.0067832448254131"	"27"	"0.001465"	"0.01847"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSSPVNVK"	"[M].sSSPVNVk.[K]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"544.81104"	"1088.61479"	"1088.61491"	"-0.10"	"-0.00006"	"6/64"	"6"	"64"	"2594125.70385742"	"HCD"	"MS2"	"20.06551"	"82.1"	"100.000"	"45.4062"	"13466"	"13466"	"13447"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"116.7"	""	"96.3"	""	"107.8"	""	"142.7"	"0.7"	"166.5"	"147.7"	""	"737"	"45"	"35.000"	"28.000"	"0.00110264951859012"	"21"	"0.001134"	"0.01391"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQAPAVATT"	"[R].tQAPAVATT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"544.81158"	"1088.61589"	"1088.61490"	"0.91"	"0.00049"	"6/80"	"6"	"80"	"5675337.95019531"	"HCD"	"MS2"	"13.51105"	"97.4"	"100.000"	"38.3624"	"10602"	"10602"	"10584"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"146.3"	""	"125.0"	""	"137.5"	""	"170.1"	"6.8"	"173.6"	"163.3"	""	"811"	"41"	"36.000"	"29.000"	"0.00313321977256308"	"23"	"0"	"0.001422"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLAESAR"	"[R].nVLAESAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"544.81622"	"1088.62517"	"1088.62614"	"-0.89"	"-0.00048"	"7/72"	"7"	"72"	"14404162.6700439"	"HCD"	"MS2"	"1.292892"	"463.9"	"81.233"	"34.2698"	"8937"	"8937"	"8919"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"608.0"	""	"611.4"	""	"680.9"	""	"796.3"	"5.1"	"805.5"	"887.7"	""	"774"	"52"	"35.000"	"28.000"	"0.000249293505754374"	"26"	"0"	"0.002086"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VSQLQER"	"[K].vSQLQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"544.81647"	"1088.62566"	"1088.62614"	"-0.44"	"-0.00024"	"5/64"	"5"	"64"	"4603587.78601074"	"HCD"	"MS2"	"1.575741"	"211.6"	"100.000"	"31.3073"	"7744"	"7744"	"7726"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"350.7"	""	"229.5"	""	"274.2"	""	"308.8"	"2.6"	"362.9"	"476.4"	""	"772"	"23"	"35.000"	"28.000"	"0.190365088326605"	"27"	"0.008728"	"0.1122"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLAESAR"	"[R].nVLAESAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"544.81653"	"1088.62578"	"1088.62614"	"-0.33"	"-0.00018"	"7/72"	"7"	"72"	"15939134.7384644"	"HCD"	"MS2"	"2.420928"	"504.0"	"84.891"	"34.2147"	"8921"	"8921"	"8903"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"698.1"	""	"693.6"	""	"714.7"	""	"822.9"	"1.6"	"894.8"	"948.0"	""	"772"	"52"	"35.000"	"28.000"	"0.000247506896561873"	"26"	"0"	"0.002964"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSQLQER"	"[K].vSQLQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"544.81671"	"1088.62615"	"1088.62614"	"0.01"	"0.00000"	"4/64"	"4"	"64"	"3600611.44677734"	"HCD"	"MS2"	"1.796373"	"174.9"	"100.000"	"31.3766"	"7763"	"7763"	"7741"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"289.3"	""	"190.8"	""	"222.4"	""	"272.9"	"3.1"	"286.0"	"392.6"	""	"774"	"22"	"35.000"	"28.000"	"0.218630609252361"	""	"0.008052"	"0.09862"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAPGGGGK"	"[R].sAPGGGGk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"544.82648"	"1088.64568"	"1088.64643"	"-0.69"	"-0.00038"	"6/56"	"6"	"56"	"11353216.5231323"	"HCD"	"MS2"	"0"	"699.4"	"100.000"	"22.6675"	"4252"	"4252"	"4230"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"995.7"	""	"891.9"	""	"945.2"	""	"1384.1"	""	"1240.6"	"1168.4"	""	"962"	"31"	"36.000"	"29.000"	"0.0385607148489474"	"18"	"0.001211"	"0.01436"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAPGGGGK"	"[R].sAPGGGGk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"544.82684"	"1088.64641"	"1088.64643"	"-0.02"	"-0.00001"	"6/56"	"6"	"56"	"10937299.8903809"	"HCD"	"MS2"	"0"	"675.0"	"100.000"	"22.6929"	"4246"	"4246"	"4219"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"941.7"	""	"894.6"	""	"890.8"	""	"1332.2"	""	"1213.7"	"1122.9"	""	"949"	"31"	"36.000"	"29.000"	"0.0370882393277162"	"21"	"0.0008629"	"0.009677"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDLTLR"	"[K].lEDLTLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"0.3871"	"0.0000"	"1"	"1"	"1"	"544.82861"	"1088.64995"	"1088.65129"	"-1.23"	"-0.00067"	"5/54"	"5"	"54"	"1189017.49743652"	"HCD"	"MS2"	"20.64956"	"49.7"	"100.000"	"76.5233"	"26085"	"26085"	"26066"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.7"	""	"65.2"	""	"69.4"	""	"86.7"	""	"97.0"	"86.8"	""	"795"	"31"	"35.000"	"29.000"	"0.0349411450440277"	""	"0.002871"	"0.02701"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDLTLR"	"[K].lEDLTLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"0.4333"	"0.0000"	"1"	"1"	"1"	"544.82886"	"1088.65044"	"1088.65129"	"-0.78"	"-0.00043"	"5/54"	"5"	"54"	"1469530.17724609"	"HCD"	"MS2"	"17.49286"	"62.3"	"100.000"	"76.6676"	"26135"	"26135"	"26120"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.6"	""	"79.7"	""	"90.6"	""	"111.1"	""	"111.3"	"118.6"	""	"795"	"30"	"35.000"	"29.000"	"0.0378736475199402"	""	"0.003449"	"0.03271"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELEGWR"	"[R].aELEGWR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C219"	"Sarcolemmal membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Slmap PE=1 SV=1"	"P0C219"	"Sarcolemmal membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Slmap PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"545.29785"	"1089.58843"	"1089.58902"	"-0.55"	"-0.00030"	"5/52"	"5"	"52"	"2646190.56854248"	"HCD"	"MS2"	"40.79831"	"131.6"	"100.000"	"56.7112"	"18072"	"18072"	"18054"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"144.3"	""	"121.0"	""	"161.2"	""	"241.7"	""	"290.9"	"294.7"	""	"836"	"23"	"36.000"	"29.000"	"0.189747595759785"	"24"	"0.005617"	"0.06403"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELEGWR"	"[R].aELEGWR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C219"	"Sarcolemmal membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Slmap PE=1 SV=1"	"P0C219"	"Sarcolemmal membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Slmap PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"545.29810"	"1089.58891"	"1089.58902"	"-0.10"	"-0.00005"	"5/52"	"5"	"52"	"2340967.21386719"	"HCD"	"MS2"	"46.87522"	"129.1"	"100.000"	"56.8676"	"18122"	"18122"	"18099"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"133.2"	""	"136.3"	""	"164.4"	""	"227.0"	""	"274.7"	"294.9"	""	"836"	"23"	"36.000"	"29.000"	"0.202850593067766"	"22"	"0.004867"	"0.05117"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELSENR"	"[K].lELSENR.[I]"	"N-Term(TMT6plex)"	"1"	"2"	"Q9EST6"	"Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Rattus norvegicus OX=10116 GN=Anp32b PE=1 SV=1"	"P49911; Q9EST6"	"Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Rattus norvegicus OX=10116 GN=Anp32a PE=2 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Rattus norvegicus OX=10116 GN=Anp32b PE=1 SV=1"	"0"	"2"	"2"	"0.3947"	"0.0000"	"1"	"1"	"1"	"545.30847"	"1089.60967"	"1089.61015"	"-0.45"	"-0.00024"	"5/56"	"5"	"56"	"5439105.07891846"	"HCD"	"MS2"	"12.44484"	"270.2"	"100.000"	"42.9975"	"12480"	"12480"	"12460"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"404.5"	""	"298.2"	""	"327.6"	""	"502.1"	""	"518.6"	"515.7"	""	"830"	"38"	"36.000"	"29.000"	"0.00726186375779233"	""	"0.003507"	"0.03582"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELSENR"	"[K].lELSENR.[I]"	"N-Term(TMT6plex)"	"1"	"2"	"Q9EST6"	"Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Rattus norvegicus OX=10116 GN=Anp32b PE=1 SV=1"	"P49911; Q9EST6"	"Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Rattus norvegicus OX=10116 GN=Anp32a PE=2 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Rattus norvegicus OX=10116 GN=Anp32b PE=1 SV=1"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"545.30859"	"1089.60991"	"1089.61015"	"-0.22"	"-0.00012"	"5/56"	"5"	"56"	"5761102.74456787"	"HCD"	"MS2"	"11.80545"	"280.1"	"100.000"	"42.9098"	"12455"	"12455"	"12435"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"419.3"	""	"311.0"	""	"333.5"	""	"540.7"	""	"552.9"	"498.3"	""	"831"	"29"	"36.000"	"29.000"	"0.0471596993911848"	""	"0.004867"	"0.05241"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGVTEDR"	"[R].aLGVTEDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"545.30872"	"1089.61016"	"1089.61015"	"0.00"	"0.00000"	"9/60"	"9"	"60"	"2829131.5826416"	"HCD"	"MS2"	"6.785771"	"149.1"	"100.000"	"35.2167"	"9328"	"9328"	"9306"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"198.7"	""	"185.2"	""	"198.1"	""	"251.9"	"4.0"	"295.5"	"281.1"	""	"831"	"37"	"36.000"	"29.000"	"0.00749153871327152"	"21"	"0"	"0.003738"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGVTEDR"	"[R].aLGVTEDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"545.30914"	"1089.61101"	"1089.61015"	"0.79"	"0.00043"	"7/60"	"7"	"60"	"2276478.59191895"	"HCD"	"MS2"	"0"	"121.0"	"100.000"	"35.2918"	"9353"	"9353"	"9332"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"145.7"	""	"137.8"	""	"174.2"	""	"206.3"	"3.3"	"244.7"	"236.2"	""	"831"	"41"	"36.000"	"29.000"	"0.00307305991786698"	"22"	"0"	"0.002935"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVDVGGQR"	"[KR].mVDVGGQR.[S]"	"N-Term(TMT6plex)"	"3"	"5"	"Q6Q7Y5; P82471; Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1;Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2;Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"Q6Q7Y5; P19627; P82471; Q9JID2; Q63210"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1; Guanine nucleotide-binding protein G(z) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaz PE=2 SV=3; Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2; Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1; Guanine nucleotide-binding protein subunit alpha-12 OS=Rattus norvegicus OX=10116 GN=Gna12 PE=1 SV=3"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"545.79675"	"1090.58623"	"1090.58764"	"-1.30"	"-0.00071"	"6/58"	"6"	"58"	"2291899.1305542"	"HCD"	"MS2"	"31.15282"	"142.3"	"100.000"	"37.5968"	"10287"	"10287"	"10275"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"204.3"	""	"158.7"	""	"159.6"	""	"199.6"	"5.3"	"251.9"	"371.5"	""	"755"	"33"	"35.000"	"28.000"	"0.0193159892916466"	"18"	"0.001635"	"0.0197"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVDVGGQR"	"[KR].mVDVGGQR.[S]"	"N-Term(TMT6plex)"	"3"	"5"	"Q6Q7Y5; P82471; Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1;Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2;Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"Q6Q7Y5; P19627; P82471; Q9JID2; Q63210"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1; Guanine nucleotide-binding protein G(z) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaz PE=2 SV=3; Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2; Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1; Guanine nucleotide-binding protein subunit alpha-12 OS=Rattus norvegicus OX=10116 GN=Gna12 PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"545.79700"	"1090.58672"	"1090.58764"	"-0.85"	"-0.00046"	"6/58"	"6"	"58"	"2522014.28985596"	"HCD"	"MS2"	"20.08877"	"149.2"	"100.000"	"37.3984"	"10213"	"10213"	"10199"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"214.2"	""	"167.6"	""	"192.8"	""	"195.7"	"2.1"	"257.9"	"385.4"	""	"754"	"34"	"35.000"	"28.000"	"0.0166089183541971"	"17"	"0.0008629"	"0.01017"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVDVGGQR"	"[KR].mVDVGGQR.[S]"	"N-Term(TMT6plex)"	"3"	"5"	"Q6Q7Y5; P82471; Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1;Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2;Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"Q6Q7Y5; P19627; P82471; Q9JID2; Q63210"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1; Guanine nucleotide-binding protein G(z) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaz PE=2 SV=3; Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2; Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1; Guanine nucleotide-binding protein subunit alpha-12 OS=Rattus norvegicus OX=10116 GN=Gna12 PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"545.79730"	"1090.58733"	"1090.58764"	"-0.29"	"-0.00016"	"6/58"	"6"	"58"	"7334641.68505859"	"HCD"	"MS2"	"14.67819"	"369.6"	"100.000"	"37.1028"	"10094"	"10094"	"10074"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"475.6"	""	"425.0"	""	"449.6"	""	"563.4"	"8.7"	"797.6"	"791.6"	""	"746"	"36"	"35.000"	"28.000"	"0.00972095274149587"	"19"	"0.0001301"	"0.004535"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVDVGGQR"	"[KR].mVDVGGQR.[S]"	"N-Term(TMT6plex)"	"3"	"5"	"Q6Q7Y5; P82471; Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1;Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2;Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"Q6Q7Y5; P19627; P82471; Q9JID2; Q63210"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1; Guanine nucleotide-binding protein G(z) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaz PE=2 SV=3; Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2; Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1; Guanine nucleotide-binding protein subunit alpha-12 OS=Rattus norvegicus OX=10116 GN=Gna12 PE=1 SV=3"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"545.79755"	"1090.58782"	"1090.58764"	"0.16"	"0.00009"	"6/58"	"6"	"58"	"6905746.12805176"	"HCD"	"MS2"	"16.17843"	"335.9"	"100.000"	"37.2828"	"10162"	"10162"	"10141"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"435.9"	""	"401.9"	""	"404.8"	""	"500.2"	"6.9"	"722.7"	"719.2"	""	"770"	"38"	"35.000"	"28.000"	"0.00673690975120492"	"20"	"0.0001301"	"0.0043"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFNDGLK.[H]"	""	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"545.79895"	"1090.59062"	"1090.58914"	"1.37"	"0.00074"	"6/86"	"6"	"86"	"1835305.69061279"	"HCD"	"MS2"	"49.96819"	"78.1"	"100.000"	"46.7830"	"14026"	"14026"	"13998"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.7"	""	"91.8"	""	"91.6"	""	"133.8"	""	"152.7"	"168.8"	"NoQuanLabels"	"772"	"26"	"35.000"	"28.000"	"0.0976309026628213"	"22"	"0.003449"	"0.03314"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFNDGLK.[H]"	""	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"545.79901"	"1090.59075"	"1090.58914"	"1.48"	"0.00081"	"6/86"	"6"	"86"	"1245118.6907959"	"HCD"	"MS2"	"49.14673"	"49.5"	"100.000"	"46.9735"	"14092"	"14092"	"14067"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.8"	""	"50.9"	""	"56.1"	""	"90.4"	""	"111.8"	"96.3"	"NoQuanLabels"	"772"	"43"	"35.000"	"28.000"	"0.0019168463607983"	"19"	"0.0008629"	"0.01023"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGDVVAGR"	"[K].sTGDVVAGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"545.80627"	"1090.60527"	"1090.60540"	"-0.12"	"-0.00007"	"8/70"	"8"	"70"	"5218001.12628174"	"HCD"	"MS2"	"30.23896"	"254.8"	"100.000"	"26.1084"	"5624"	"5624"	"5601"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"373.7"	""	"328.1"	""	"356.3"	""	"427.8"	""	"464.9"	"462.8"	""	"770"	"35"	"35.000"	"28.000"	"0.0122309651720016"	"20"	"0"	"0.00138"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGDVVAGR"	"[K].sTGDVVAGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"545.80652"	"1090.60576"	"1090.60540"	"0.33"	"0.00018"	"8/70"	"8"	"70"	"5573655.58258057"	"HCD"	"MS2"	"29.64159"	"272.0"	"100.000"	"26.0278"	"5607"	"5607"	"5587"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"434.0"	""	"345.6"	""	"380.0"	""	"433.9"	"1.2"	"485.9"	"494.7"	""	"770"	"34"	"35.000"	"28.000"	"0.0155761718303515"	"21"	"0"	"0.001129"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIEMELR"	"[K].aIEMELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"545.80951"	"1090.61174"	"1090.61280"	"-0.97"	"-0.00053"	"4/52"	"4"	"52"	"1354469.50714111"	"HCD"	"MS2"	"0"	"69.3"	"100.000"	"61.8068"	"20101"	"20101"	"20081"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"100.6"	""	"96.1"	""	"103.3"	""	"80.9"	"0.7"	"128.4"	"147.4"	""	"845"	"23"	"36.000"	"29.000"	"0.211264591027773"	"25"	"0.005001"	"0.05655"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIEMELR"	"[K].aIEMELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"545.80975"	"1090.61223"	"1090.61280"	"-0.52"	"-0.00028"	"4/52"	"4"	"52"	"1286816.87451172"	"HCD"	"MS2"	"29.09711"	"64.7"	"100.000"	"61.5099"	"19980"	"19980"	"19953"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.0"	""	"93.0"	""	"94.3"	""	"85.3"	""	"120.9"	"120.8"	""	"845"	"22"	"36.000"	"29.000"	"0.25516829591152"	"25"	"0.005309"	"0.06032"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIEMELR"	"[K].aIEMELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"545.81000"	"1090.61272"	"1090.61280"	"-0.07"	"-0.00004"	"4/52"	"4"	"52"	"1468673.95214844"	"HCD"	"MS2"	"6.992476"	"66.7"	"100.000"	"61.3818"	"19943"	"19943"	"19921"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"99.5"	""	"88.8"	""	"100.8"	""	"77.8"	""	"129.1"	"136.5"	""	"843"	"25"	"36.000"	"29.000"	"0.143482051958972"	"27"	"0.004942"	"0.05582"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTPASSAK"	"[K].TVTPASSAk.[T]"	"K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"545.81854"	"1090.62981"	"1090.63055"	"-0.68"	"-0.00037"	"7/76"	"7"	"76"	"3199999.5836792"	"HCD"	"MS2"	"14.19646"	"214.4"	"100.000"	"22.0410"	"3997"	"3997"	"3971"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"261.2"	""	"272.7"	""	"292.4"	""	"399.1"	"15.5"	"433.3"	"359.5"	""	"739"	"41"	"35.000"	"28.000"	"0.00262793393294905"	"20"	"0.006769"	"0.07941"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIYAPIR"	"[R].eIYAPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8B7"	"Inactive hydroxysteroid dehydrogenase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hsdl1 PE=2 SV=1"	"Q4V8B7"	"Inactive hydroxysteroid dehydrogenase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hsdl1 PE=2 SV=1"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"545.82703"	"1090.64678"	"1090.64581"	"0.88"	"0.00048"	"5/48"	"5"	"48"	"914867.603881836"	"HCD"	"MS2"	"16.95882"	"47.9"	"100.000"	"56.1167"	"17816"	"17816"	"17789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.5"	""	"56.0"	""	"69.6"	""	"70.7"	""	"104.0"	"94.8"	""	"669"	"25"	"35.000"	"28.000"	"0.106511407101739"	"27"	"0.007808"	"0.09536"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPDDVFR"	"[R].nPDDVFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYU3"	"DnaJ homolog subfamily B member 6 OS=Rattus norvegicus OX=10116 GN=Dnajb6 PE=1 SV=1"	"Q6AYU3"	"DnaJ homolog subfamily B member 6 OS=Rattus norvegicus OX=10116 GN=Dnajb6 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"546.28729"	"1091.56731"	"1091.56829"	"-0.90"	"-0.00049"	"8/62"	"8"	"62"	"2620872.23168945"	"HCD"	"MS2"	"2.630578"	"119.0"	"100.000"	"48.1441"	"14581"	"14581"	"14562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"143.6"	""	"126.5"	""	"152.2"	""	"205.0"	"1.3"	"238.7"	"262.6"	""	"607"	"26"	"34.000"	"27.000"	"0.0815002039257356"	"26"	"0.003717"	"0.03879"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPDDVFR"	"[R].nPDDVFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYU3"	"DnaJ homolog subfamily B member 6 OS=Rattus norvegicus OX=10116 GN=Dnajb6 PE=1 SV=1"	"Q6AYU3"	"DnaJ homolog subfamily B member 6 OS=Rattus norvegicus OX=10116 GN=Dnajb6 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"546.28760"	"1091.56792"	"1091.56829"	"-0.34"	"-0.00019"	"4/62"	"4"	"62"	"1035162.43914795"	"HCD"	"MS2"	"13.73374"	"60.2"	"100.000"	"48.6427"	"14772"	"14772"	"14748"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"77.7"	""	"63.5"	""	"74.7"	""	"106.6"	""	"117.1"	"131.7"	""	"733"	"18"	"35.000"	"28.000"	"0.522485183055202"	"21"	"0.003653"	"0.03749"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVQEAER"	"[R].mVQEAER.[Y]"	"N-Term(TMT6plex)"	"1"	"3"	"P14659"	"Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"546.28912"	"1091.57097"	"1091.57166"	"-0.63"	"-0.00034"	"5/60"	"5"	"60"	"2978468.13470459"	"HCD"	"MS2"	"20.00348"	"167.7"	"100.000"	"27.3237"	"6131"	"6131"	"6107"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"245.7"	""	"230.8"	""	"239.6"	""	"215.8"	"0.9"	"333.4"	"323.5"	""	"729"	"21"	"35.000"	"28.000"	"0.324113807459222"	"22"	"0.004867"	"0.05232"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVQEAER"	"[R].mVQEAER.[Y]"	"N-Term(TMT6plex)"	"1"	"3"	"P14659"	"Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"546.28949"	"1091.57170"	"1091.57166"	"0.04"	"0.00002"	"6/60"	"6"	"60"	"3373455.55944824"	"HCD"	"MS2"	"33.99509"	"192.3"	"100.000"	"27.3978"	"6146"	"6146"	"6125"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"287.0"	""	"271.9"	""	"280.0"	""	"227.6"	""	"371.8"	"385.1"	""	"753"	"22"	"35.000"	"28.000"	"0.233219564766408"	"25"	"0.00447"	"0.04818"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQLMER"	"[R].sVQLMER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"546.30688"	"1091.60649"	"1091.60805"	"-1.42"	"-0.00078"	"5/66"	"5"	"66"	"8916336.00097656"	"HCD"	"MS2"	"0"	"381.2"	"100.000"	"44.0043"	"12899"	"12899"	"12881"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"868.3"	""	"522.1"	""	"342.9"	""	"456.7"	""	"678.3"	"744.8"	""	"801"	"36"	"36.000"	"29.000"	"0.0107053906666966"	"25"	"0.004069"	"0.04435"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQLMER"	"[R].sVQLMER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"546.30725"	"1091.60723"	"1091.60805"	"-0.75"	"-0.00041"	"5/66"	"5"	"66"	"9213844.85949707"	"HCD"	"MS2"	"0"	"399.0"	"100.000"	"44.1358"	"12942"	"12942"	"12923"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"914.7"	""	"556.4"	""	"365.1"	""	"470.8"	""	"709.3"	"764.3"	""	"799"	"39"	"36.000"	"29.000"	"0.00509937304120133"	"27"	"0.003449"	"0.03405"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQLMER"	"[R].sVQLMER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"546.30731"	"1091.60735"	"1091.60805"	"-0.64"	"-0.00035"	"5/66"	"5"	"66"	"3389582.12823486"	"HCD"	"MS2"	"0.9276054"	"119.8"	"100.000"	"44.3002"	"13017"	"13017"	"13005"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"222.6"	""	"161.6"	""	"132.5"	""	"161.3"	"3.1"	"216.2"	"237.8"	""	"799"	"39"	"36.000"	"29.000"	"0.00509937304120133"	"27"	"0.002973"	"0.02866"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQLMER"	"[R].sVQLMER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"546.30750"	"1091.60771"	"1091.60805"	"-0.30"	"-0.00017"	"5/66"	"5"	"66"	"2560184.74890137"	"HCD"	"MS2"	"0"	"129.5"	"100.000"	"44.4398"	"13062"	"13062"	"13049"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"278.7"	""	"178.3"	""	"130.9"	""	"144.8"	""	"237.6"	"256.9"	""	"797"	"39"	"36.000"	"29.000"	"0.00528966691405301"	"27"	"0.002871"	"0.02687"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMDDLDR"	"[K].vMDDLDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"546.78162"	"1092.55596"	"1092.55568"	"0.26"	"0.00014"	"6/54"	"6"	"54"	"1567923.49499512"	"HCD"	"MS2"	"45.01687"	"74.1"	"100.000"	"49.5350"	"15148"	"15148"	"15126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"123.0"	""	"92.6"	""	"101.1"	""	"103.1"	""	"148.3"	"138.7"	""	"604"	"33"	"34.000"	"27.000"	"0.0166343924314432"	"25"	"0.001374"	"0.01698"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDFPSLR"	"[K].eDFPSLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"546.79626"	"1092.58525"	"1092.58869"	"-3.15"	"-0.00172"	"5/56"	"5"	"56"	"3683349.70898438"	"HCD"	"MS2"	"0"	"166.8"	"100.000"	"59.7610"	"19302"	"19302"	"19295"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"233.9"	""	"188.7"	""	"101.9"	""	"402.0"	""	"358.8"	"298.7"	""	"669"	"25"	"35.000"	"28.000"	"0.0984909036505686"	"28"	"0.005874"	"0.06651"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDFPSLR"	"[K].eDFPSLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"546.79681"	"1092.58635"	"1092.58869"	"-2.14"	"-0.00117"	"5/56"	"5"	"56"	"3474097.87438965"	"HCD"	"MS2"	"0"	"159.8"	"100.000"	"59.9831"	"19379"	"19379"	"19375"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"224.0"	""	"197.7"	""	"79.8"	""	"377.0"	""	"362.4"	"288.1"	""	"669"	"24"	"35.000"	"28.000"	"0.12229145779459"	"28"	"0.005874"	"0.0664"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDFPSLR"	"[K].eDFPSLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"546.79724"	"1092.58721"	"1092.58869"	"-1.36"	"-0.00074"	"5/56"	"5"	"56"	"6967976.17156982"	"HCD"	"MS2"	"0"	"294.9"	"100.000"	"60.0348"	"19402"	"19402"	"19391"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"400.2"	""	"325.5"	""	"153.6"	""	"713.5"	""	"651.5"	"558.6"	""	"664"	"25"	"35.000"	"28.000"	"0.0948720060400483"	""	"0.005427"	"0.06268"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDFPSLR"	"[K].eDFPSLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"546.79736"	"1092.58745"	"1092.58869"	"-1.14"	"-0.00062"	"5/56"	"5"	"56"	"6956784.72119141"	"HCD"	"MS2"	"0"	"294.5"	"100.000"	"60.2576"	"19478"	"19478"	"19467"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"422.4"	""	"310.6"	""	"161.7"	""	"690.8"	""	"682.0"	"534.0"	""	"664"	"25"	"35.000"	"28.000"	"0.0948720060400483"	""	"0.006769"	"0.07794"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDAYER"	"[K].lPDAYER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"546.79761"	"1092.58794"	"1092.58869"	"-0.69"	"-0.00038"	"8/54"	"8"	"54"	"3432259.95977783"	"HCD"	"MS2"	"11.74258"	"137.1"	"100.000"	"46.8843"	"14067"	"14067"	"14046"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"205.7"	""	"181.6"	""	"187.1"	""	"221.7"	""	"261.0"	"250.3"	""	"667"	"23"	"35.000"	"28.000"	"0.172621878455514"	"25"	"0.004431"	"0.04643"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDAYER"	"[K].lPDAYER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"546.79773"	"1092.58818"	"1092.58869"	"-0.46"	"-0.00025"	"8/54"	"8"	"54"	"10877262.2891846"	"HCD"	"MS2"	"0"	"367.7"	"100.000"	"47.1859"	"14191"	"14191"	"14174"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"585.4"	""	"499.4"	""	"534.9"	""	"570.9"	""	"630.6"	"659.3"	""	"721"	"26"	"35.000"	"28.000"	"0.0988337488980001"	"27"	"0.005369"	"0.06075"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDFPSLR"	"[K].eDFPSLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"546.79779"	"1092.58830"	"1092.58869"	"-0.35"	"-0.00019"	"6/56"	"6"	"56"	"673428.431213379"	"HCD"	"MS2"	"0"	"35.6"	"100.000"	"60.3555"	"19527"	"19527"	"19505"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.8"	""	"38.2"	""	"26.3"	""	"94.9"	""	"68.3"	"66.8"	""	"721"	"15"	"35.000"	"28.000"	"1.20477311929414"	"22"	"0.005369"	"0.06052"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDAYER"	"[K].lPDAYER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"546.79822"	"1092.58916"	"1092.58869"	"0.43"	"0.00023"	"8/54"	"8"	"54"	"3429793.60461426"	"HCD"	"MS2"	"0"	"134.9"	"100.000"	"47.1277"	"14155"	"14155"	"14129"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"221.8"	""	"187.0"	""	"185.9"	""	"196.2"	""	"237.5"	"249.9"	""	"718"	"27"	"35.000"	"28.000"	"0.0691981443835546"	"27"	"0.00413"	"0.04574"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDAYER"	"[K].lPDAYER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"546.79834"	"1092.58940"	"1092.58869"	"0.65"	"0.00036"	"8/54"	"8"	"54"	"10281320.9035645"	"HCD"	"MS2"	"0.9100051"	"364.6"	"100.000"	"47.4243"	"14276"	"14276"	"14257"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"565.0"	""	"488.4"	""	"519.0"	""	"566.7"	""	"644.5"	"670.3"	""	"719"	"26"	"35.000"	"28.000"	"0.100855339284364"	"27"	"0.005183"	"0.05909"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIELDMR"	"[R].sIELDMR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZKU7"	"Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Rattus norvegicus OX=10116 GN=Bloc1s1 PE=3 SV=1"	"D3ZKU7"	"Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Rattus norvegicus OX=10116 GN=Bloc1s1 PE=3 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"546.79913"	"1092.59099"	"1092.59206"	"-0.98"	"-0.00054"	"4/56"	"4"	"56"	"850988.963928223"	"HCD"	"MS2"	"25.71729"	"49.4"	"100.000"	"61.3081"	"19913"	"19913"	"19889"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.1"	""	"66.1"	""	"75.9"	""	"72.7"	""	"93.9"	"94.3"	""	"682"	"22"	"35.000"	"28.000"	"0.216647847761444"	"25"	"0.008641"	"0.1067"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLIDSLT"	"[R].dSLIDSLT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"546.80255"	"1092.59783"	"1092.59859"	"-0.70"	"-0.00038"	"5/72"	"5"	"72"	"545150.978210449"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"102.3073"	"35709"	"35709"	"35705"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.2"	""	"13.7"	""	"10.1"	""	"20.6"	""	"17.2"	"20.2"	""	"661"	"39"	"35.000"	"28.000"	"0.00452034376859428"	"24"	"0.000936"	"0.01277"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLIDSLT"	"[R].dSLIDSLT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"546.80273"	"1092.59819"	"1092.59859"	"-0.36"	"-0.00020"	"6/72"	"6"	"72"	"168673.823974609"	"HCD"	"MS2"	"27.82409"	"3.8"	"100.000"	"102.0551"	"35639"	"35639"	"35632"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.9"	""	"5.1"	""	"4.3"	""	"7.2"	""	"7.1"	"6.3"	""	"665"	"33"	"35.000"	"28.000"	"0.0163980289815016"	"16"	"0.0004639"	"0.007918"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLIDSLT"	"[R].dSLIDSLT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"546.80298"	"1092.59868"	"1092.59859"	"0.09"	"0.00005"	"6/72"	"6"	"72"	"192414.689147949"	"HCD"	"MS2"	"20.11461"	"4.3"	"100.000"	"102.0167"	"35680"	"35680"	"35673"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.7"	""	"3.8"	""	"4.5"	""	"8.2"	""	"7.6"	"10.6"	""	"666"	"28"	"35.000"	"28.000"	"0.0569435099925065"	"16"	"0.0003538"	"0.007386"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLIDSLT"	"[R].dSLIDSLT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"546.80304"	"1092.59880"	"1092.59859"	"0.20"	"0.00011"	"6/72"	"6"	"72"	"237053.374816895"	"HCD"	"MS2"	"25.2234"	"6.6"	"100.000"	"102.5632"	"35780"	"35780"	"35776"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.1"	""	"5.9"	""	"7.2"	""	"18.8"	""	"12.7"	"11.1"	""	"666"	"32"	"35.000"	"28.000"	"0.0205326135619873"	"15"	"0.0004639"	"0.007519"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLIDSLT"	"[R].dSLIDSLT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"546.80310"	"1092.59892"	"1092.59859"	"0.31"	"0.00017"	"5/72"	"5"	"72"	"617365.162841797"	"HCD"	"MS2"	"3.257539"	"12.2"	"100.000"	"102.2765"	"35761"	"35761"	"35758"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.4"	""	"13.5"	""	"14.1"	""	"28.4"	""	"27.2"	"22.5"	""	"666"	"42"	"35.000"	"28.000"	"0.00219504907116359"	"25"	"0.0001301"	"0.004575"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLIDSLT"	"[R].dSLIDSLT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"546.80322"	"1092.59917"	"1092.59859"	"0.53"	"0.00029"	"6/72"	"6"	"72"	"192332.556518555"	"HCD"	"MS2"	"19.21319"	"7.3"	"100.000"	"102.5435"	"35838"	"35838"	"35835"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.0"	""	"7.1"	""	"7.3"	""	"23.5"	""	"14.6"	"9.7"	""	"664"	"23"	"35.000"	"28.000"	"0.162232583301821"	"18"	"0.001546"	"0.01892"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPIVHR"	"[R].eIPIVHR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P42667"	"Signal peptidase complex catalytic subunit SEC11A OS=Rattus norvegicus OX=10116 GN=Sec11a PE=2 SV=1"	"P42667"	"Signal peptidase complex catalytic subunit SEC11A OS=Rattus norvegicus OX=10116 GN=Sec11a PE=2 SV=1"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"364.89557"	"1092.67215"	"1092.67269"	"-0.50"	"-0.00018"	"5/48"	"5"	"48"	"2272667.25872803"	"HCD"	"MS2"	"52.51659"	"98.9"	"100.000"	"40.0088"	"11274"	"11274"	"11252"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"126.5"	""	"125.4"	""	"137.5"	""	"164.3"	"10.2"	"186.2"	"187.4"	""	"231"	"14"	"30.000"	"23.000"	"0.416468332689997"	"16"	"0.009594"	"0.126"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDFGDAAR"	"[K].iDFGDAAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P10824"	"Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"P10824"	"Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"547.29547"	"1093.58367"	"1093.58394"	"-0.25"	"-0.00014"	"11/62"	"11"	"62"	"1513562.35064697"	"HCD"	"MS2"	"2.414389"	"73.7"	"100.000"	"58.6160"	"18849"	"18849"	"18831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.8"	""	"78.4"	""	"81.8"	""	"137.6"	"0.8"	"153.7"	"176.9"	""	"630"	"37"	"34.000"	"27.000"	"0.00664217867228986"	"24"	"0"	"0.002674"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFPSVDSR"	"[R].gFPSVDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"2"	"2"	"0.2609"	"0.0000"	"1"	"1"	"1"	"547.29547"	"1093.58367"	"1093.58394"	"-0.25"	"-0.00014"	"5/62"	"5"	"62"	"3165230.86315918"	"HCD"	"MS2"	"46.44308"	"174.1"	"100.000"	"45.7814"	"13607"	"13607"	"13581"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"227.9"	""	"179.9"	""	"159.6"	""	"328.4"	""	"375.7"	"385.8"	""	"630"	"23"	"34.000"	"27.000"	"0.164934137524511"	""	"0.0002479"	"0.005315"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFPSVDSR"	"[R].gFPSVDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"2"	"2"	"0.2609"	"0.0000"	"1"	"1"	"1"	"547.29553"	"1093.58379"	"1093.58394"	"-0.14"	"-0.00008"	"7/62"	"7"	"62"	"3429738.18060303"	"HCD"	"MS2"	"42.13997"	"171.6"	"100.000"	"45.6340"	"13559"	"13559"	"13534"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"217.6"	""	"169.7"	""	"158.4"	""	"337.0"	""	"383.1"	"365.9"	""	"630"	"23"	"34.000"	"27.000"	"0.172707243950069"	""	"0.0003538"	"0.006428"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFPSVDSR"	"[R].gFPSVDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"547.29559"	"1093.58391"	"1093.58394"	"-0.03"	"-0.00001"	"5/62"	"5"	"62"	"2456877.16021729"	"HCD"	"MS2"	"35.36857"	"171.0"	"100.000"	"46.0829"	"13730"	"13730"	"13709"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"379.9"	""	"316.7"	""	"183.8"	""	"188.3"	""	"260.4"	"287.9"	""	"630"	"14"	"34.000"	"27.000"	"1.1463323638007"	"24"	"0.00447"	"0.04729"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDFGDAAR"	"[K].iDFGDAAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P10824"	"Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"P10824"	"Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"547.29565"	"1093.58403"	"1093.58394"	"0.08"	"0.00005"	"6/62"	"6"	"62"	"1110067.56756592"	"HCD"	"MS2"	"16.30897"	"59.2"	"100.000"	"58.4751"	"18777"	"18777"	"18751"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.6"	""	"61.4"	""	"69.8"	""	"106.2"	""	"136.2"	"127.0"	""	"620"	"31"	"34.000"	"27.000"	"0.0225611739406416"	"20"	"0"	"0.003266"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDFGDAAR"	"[K].iDFGDAAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P10824"	"Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"P10824"	"Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"547.29578"	"1093.58428"	"1093.58394"	"0.31"	"0.00017"	"11/62"	"11"	"62"	"1701800.78692627"	"HCD"	"MS2"	"0"	"89.2"	"100.000"	"58.7951"	"18907"	"18907"	"18888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.3"	""	"92.7"	""	"87.9"	""	"165.8"	""	"199.4"	"220.9"	""	"652"	"35"	"35.000"	"28.000"	"0.00991328518370466"	"23"	"0.0001301"	"0.004041"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDFGDAAR"	"[K].iDFGDAAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P10824"	"Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"P10824"	"Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"547.29602"	"1093.58476"	"1093.58394"	"0.75"	"0.00041"	"7/62"	"7"	"62"	"1594020.14056396"	"HCD"	"MS2"	"12.6196"	"76.5"	"100.000"	"58.3144"	"18726"	"18726"	"18703"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"86.2"	""	"88.4"	""	"77.4"	""	"142.0"	"0.7"	"167.7"	"165.1"	""	"658"	"35"	"35.000"	"28.000"	"0.00944486811486123"	"23"	"0.0001301"	"0.004536"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEQTLR"	"[K].fAEQTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"547.31342"	"1093.61955"	"1093.62032"	"-0.70"	"-0.00039"	"5/58"	"5"	"58"	"1843376.25762939"	"HCD"	"MS2"	"10.97542"	"105.2"	"100.000"	"45.3258"	"13422"	"13422"	"13403"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"151.8"	""	"154.5"	""	"142.1"	""	"139.8"	""	"190.2"	"219.1"	""	"566"	"18"	"34.000"	"27.000"	"0.438315103152232"	"24"	"0.006739"	"0.07619"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFQTIAR"	"[K].eFQTIAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"547.31360"	"1093.61992"	"1093.62032"	"-0.37"	"-0.00020"	"5/62"	"5"	"62"	"5334060.73242188"	"HCD"	"MS2"	"0"	"249.5"	"100.000"	"43.9217"	"12866"	"12866"	"12853"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"430.0"	""	"349.7"	""	"329.4"	""	"354.3"	"0.9"	"450.1"	"447.6"	""	"568"	"31"	"34.000"	"27.000"	"0.0214940542185957"	"22"	"0.00912"	"0.1187"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEQTLR"	"[K].fAEQTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"547.31366"	"1093.62004"	"1093.62032"	"-0.26"	"-0.00014"	"4/58"	"4"	"58"	"1920059.9697876"	"HCD"	"MS2"	"14.11494"	"102.6"	"100.000"	"45.2105"	"13386"	"13386"	"13367"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"140.7"	""	"136.2"	""	"157.3"	""	"148.4"	""	"179.3"	"210.5"	""	"568"	"14"	"34.000"	"27.000"	"1.13323072270848"	"18"	"0.007808"	"0.09558"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFQTIAR"	"[K].eFQTIAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"547.31378"	"1093.62029"	"1093.62032"	"-0.03"	"-0.00002"	"5/62"	"5"	"62"	"4799608.48876953"	"HCD"	"MS2"	"2.053492"	"224.3"	"100.000"	"44.0509"	"12908"	"12908"	"12891"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"358.2"	""	"325.7"	""	"295.5"	""	"320.7"	""	"413.4"	"412.1"	""	"568"	"34"	"34.000"	"27.000"	"0.0122833928013942"	"22"	"0.009478"	"0.1244"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFQTIAR"	"[K].eFQTIAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"547.31384"	"1093.62041"	"1093.62032"	"0.08"	"0.00004"	"5/62"	"5"	"62"	"2269346.75537109"	"HCD"	"MS2"	"49.72028"	"115.5"	"100.000"	"43.6350"	"12750"	"12750"	"12734"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"179.9"	""	"156.1"	""	"146.1"	""	"174.8"	""	"219.9"	"219.5"	""	"554"	"28"	"34.000"	"27.000"	"0.0416370324606936"	"25"	"0.005921"	"0.06825"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEQTLR"	"[K].fAEQTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"547.31409"	"1093.62090"	"1093.62032"	"0.52"	"0.00029"	"5/58"	"5"	"58"	"2982756.82971191"	"HCD"	"MS2"	"0"	"179.4"	"100.000"	"45.0200"	"13297"	"13297"	"13279"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"232.0"	""	"235.2"	""	"241.1"	""	"244.6"	""	"336.5"	"416.1"	""	"568"	"24"	"34.000"	"27.000"	"0.125695097750986"	"19"	"0.007279"	"0.08362"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEQTLR"	"[K].fAEQTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"547.31433"	"1093.62139"	"1093.62032"	"0.97"	"0.00053"	"5/58"	"5"	"58"	"3507855.67132568"	"HCD"	"MS2"	"3.070319"	"184.1"	"100.000"	"44.9115"	"13264"	"13264"	"13241"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"247.6"	""	"243.2"	""	"256.6"	""	"240.0"	""	"352.8"	"408.1"	""	"572"	"27"	"34.000"	"27.000"	"0.058934015519522"	"21"	"0.005874"	"0.06537"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDDAFR"	"[R].eLDDAFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"O54874"	"Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus OX=10116 GN=Cdc42bpa PE=1 SV=1"	"O54874"	"Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus OX=10116 GN=Cdc42bpa PE=1 SV=1"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"3"	"547.78711"	"1094.56694"	"1094.56795"	"-0.93"	"-0.00051"	"6/54"	"6"	"54"	"1324231.83422852"	"HCD"	"MS2"	"49.15377"	"60.9"	"100.000"	"56.8768"	"18126"	"18126"	"18099"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.5"	""	"68.4"	""	"78.5"	""	"122.0"	""	"115.3"	"113.6"	""	"521"	"17"	"34.000"	"27.000"	"0.511455352115791"	"24"	"0.002871"	"0.0268"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFVISDR"	"[K].eFVISDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"547.80444"	"1094.60161"	"1094.60434"	"-2.49"	"-0.00137"	"6/58"	"6"	"58"	"2182745.42120361"	"HCD"	"MS2"	"0"	"105.4"	"100.000"	"54.7197"	"17260"	"17260"	"17239"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"186.0"	""	"141.0"	""	"140.7"	""	"167.7"	""	"192.0"	"170.4"	""	"540"	"32"	"34.000"	"27.000"	"0.0190705739651"	"27"	"0.003449"	"0.03314"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFVISDR"	"[K].eFVISDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"547.80530"	"1094.60332"	"1094.60434"	"-0.93"	"-0.00051"	"6/58"	"6"	"58"	"11325322.0955811"	"HCD"	"MS2"	"0"	"500.0"	"100.000"	"55.0256"	"17385"	"17385"	"17368"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"929.5"	""	"670.1"	""	"666.7"	""	"776.4"	""	"839.9"	"851.3"	""	"542"	"34"	"34.000"	"27.000"	"0.0106162048696209"	""	"0.003111"	"0.03081"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFVISDR"	"[K].eFVISDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"547.80542"	"1094.60356"	"1094.60434"	"-0.71"	"-0.00039"	"6/58"	"6"	"58"	"9804970.45159912"	"HCD"	"MS2"	"1.421084"	"413.3"	"100.000"	"55.2576"	"17465"	"17465"	"17447"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"764.9"	""	"535.3"	""	"545.8"	""	"648.7"	""	"714.2"	"703.8"	""	"541"	"34"	"34.000"	"27.000"	"0.0105966177757655"	""	"0.003449"	"0.03431"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFVISDR"	"[K].eFVISDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"547.80548"	"1094.60369"	"1094.60434"	"-0.60"	"-0.00033"	"6/58"	"6"	"58"	"3040319.97332764"	"HCD"	"MS2"	"6.560803"	"140.9"	"100.000"	"54.9685"	"17348"	"17348"	"17337"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"270.8"	""	"183.1"	""	"181.4"	""	"237.7"	""	"239.8"	"221.2"	""	"543"	"34"	"34.000"	"27.000"	"0.0117157429358738"	""	"0.002973"	"0.0286"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFVISDR"	"[K].eFVISDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"547.80566"	"1094.60405"	"1094.60434"	"-0.26"	"-0.00014"	"6/58"	"6"	"58"	"1018563.14916992"	"HCD"	"MS2"	"6.568179"	"57.0"	"100.000"	"55.5662"	"17591"	"17591"	"17570"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"93.2"	""	"76.8"	""	"78.5"	""	"88.0"	"1.5"	"100.9"	"100.7"	""	"543"	"21"	"34.000"	"27.000"	"0.209300291850993"	"23"	"0.006443"	"0.07228"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEFTR"	"[K].aLEEFTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RJY4"	"Dehydrogenase/reductase SDR family member 7B OS=Rattus norvegicus OX=10116 GN=Dhrs7b PE=1 SV=1"	"Q5RJY4"	"Dehydrogenase/reductase SDR family member 7B OS=Rattus norvegicus OX=10116 GN=Dhrs7b PE=1 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"547.80566"	"1094.60405"	"1094.60434"	"-0.26"	"-0.00014"	"5/54"	"5"	"54"	"1248414.17193604"	"HCD"	"MS2"	"5.984868"	"67.5"	"100.000"	"55.8817"	"17720"	"17720"	"17697"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"94.7"	""	"78.3"	""	"94.5"	""	"109.4"	"0.7"	"134.6"	"127.8"	""	"543"	"22"	"34.000"	"27.000"	"0.192207280460294"	"23"	"0.004676"	"0.05032"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADDLYR"	"[R].lADDLYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J86"	"Attractin OS=Rattus norvegicus OX=10116 GN=Atrn PE=2 SV=1"	"Q99J86"	"Attractin OS=Rattus norvegicus OX=10116 GN=Atrn PE=2 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"547.80573"	"1094.60417"	"1094.60434"	"-0.15"	"-0.00008"	"9/50"	"9"	"50"	"1470032.87713623"	"HCD"	"MS2"	"19.4124"	"56.6"	"100.000"	"59.4260"	"19165"	"19165"	"19142"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.3"	""	"88.0"	""	"80.6"	""	"102.0"	"1.5"	"87.6"	"97.3"	""	"543"	"12"	"34.000"	"27.000"	"1.64728913483279"	"20"	"0.008668"	"0.1093"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADDLYR"	"[R].lADDLYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J86"	"Attractin OS=Rattus norvegicus OX=10116 GN=Atrn PE=2 SV=1"	"Q99J86"	"Attractin OS=Rattus norvegicus OX=10116 GN=Atrn PE=2 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"547.80652"	"1094.60576"	"1094.60434"	"1.30"	"0.00071"	"8/50"	"8"	"50"	"1001020.9621582"	"HCD"	"MS2"	"37.72365"	"56.9"	"100.000"	"58.8762"	"18956"	"18956"	"18927"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"88.1"	""	"86.1"	""	"70.4"	""	"94.3"	""	"100.6"	"103.1"	""	"548"	"24"	"34.000"	"27.000"	"0.105621070000421"	""	"0.0023"	"0.02396"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADDLYR"	"[R].lADDLYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J86"	"Attractin OS=Rattus norvegicus OX=10116 GN=Atrn PE=2 SV=1"	"Q99J86"	"Attractin OS=Rattus norvegicus OX=10116 GN=Atrn PE=2 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"547.80664"	"1094.60600"	"1094.60434"	"1.52"	"0.00083"	"5/50"	"5"	"50"	"1250841.90698242"	"HCD"	"MS2"	"0"	"69.5"	"100.000"	"59.1267"	"19043"	"19043"	"19016"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"98.9"	""	"117.0"	""	"95.9"	""	"108.4"	""	"118.2"	"123.6"	""	"514"	"26"	"34.000"	"27.000"	"0.0588752986761318"	"19"	"0.00413"	"0.04518"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAENYLR"	"[K].tAENYLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O88766"	"Neutrophil collagenase OS=Rattus norvegicus OX=10116 GN=Mmp8 PE=2 SV=1"	"O88766"	"Neutrophil collagenase OS=Rattus norvegicus OX=10116 GN=Mmp8 PE=2 SV=1"	"0"	"2"	"2"	"0.3810"	"0.0000"	"1"	"1"	"1"	"548.30316"	"1095.59905"	"1095.59959"	"-0.50"	"-0.00027"	"5/58"	"5"	"58"	"3373545.73968506"	"HCD"	"MS2"	"0"	"193.0"	"100.000"	"37.5291"	"10265"	"10265"	"10253"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"226.9"	""	"229.9"	""	"216.2"	""	"326.0"	""	"395.3"	"444.7"	""	"499"	"21"	"33.000"	"26.000"	"0.209445266636589"	"26"	"0.00912"	"0.1176"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVVHELR"	"[K].nVVHELR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"365.88675"	"1095.64569"	"1095.64721"	"-1.38"	"-0.00050"	"6/60"	"6"	"60"	"15175323.4626465"	"HCD"	"MS2"	"44.8675"	"234.7"	"52.677"	"26.5095"	"5801"	"5801"	"5780"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"257.0"	""	"259.2"	""	"289.0"	""	"440.3"	""	"504.8"	"483.1"	""	"324"	"31"	"32.000"	"25.000"	"0.0140124802841662"	"22"	"0.00736"	"0.08561"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVVHELR"	"[K].nVVHELR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"365.88699"	"1095.64643"	"1095.64721"	"-0.71"	"-0.00026"	"6/60"	"6"	"60"	"17452266.303833"	"HCD"	"MS2"	"59.41317"	"249.6"	"46.988"	"26.5399"	"5797"	"5797"	"5778"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"260.7"	""	"284.2"	""	"312.5"	""	"449.8"	""	"543.5"	"521.5"	""	"324"	"33"	"32.000"	"25.000"	"0.00813794995026267"	"21"	"0.006958"	"0.08061"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SATQFTGR"	"[K].sATQFTGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"548.80084"	"1096.59441"	"1096.59484"	"-0.39"	"-0.00022"	"6/74"	"6"	"74"	"3289434.15881348"	"HCD"	"MS2"	"11.82644"	"178.6"	"100.000"	"29.6725"	"7084"	"7084"	"7058"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"255.2"	""	"230.9"	""	"256.3"	""	"269.4"	""	"335.8"	"345.9"	""	"378"	"35"	"32.000"	"25.000"	"0.00535133087206083"	"20"	"0"	"0.003603"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SATQFTGR"	"[K].sATQFTGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"548.80090"	"1096.59453"	"1096.59484"	"-0.28"	"-0.00015"	"6/74"	"6"	"74"	"4264879.09320068"	"HCD"	"MS2"	"4.386302"	"222.3"	"100.000"	"29.7372"	"7098"	"7098"	"7079"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"322.0"	""	"283.5"	""	"314.2"	""	"323.5"	""	"416.8"	"452.5"	""	"378"	"38"	"32.000"	"25.000"	"0.00286722519449815"	"21"	"0.0001301"	"0.004451"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYEVSLR"	"[K].tYEVSLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"548.81311"	"1096.61894"	"1096.61999"	"-0.95"	"-0.00052"	"5/56"	"5"	"56"	"2023223.92730713"	"HCD"	"MS2"	"22.64482"	"103.7"	"100.000"	"50.2259"	"15430"	"15430"	"15408"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"135.3"	""	"121.4"	""	"130.7"	""	"189.9"	""	"202.4"	"212.1"	""	"355"	"10"	"32.000"	"25.000"	"1.76278098594716"	"13"	"0.00912"	"0.1188"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYEVSLR"	"[K].tYEVSLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"548.81360"	"1096.61992"	"1096.61999"	"-0.06"	"-0.00003"	"5/56"	"5"	"56"	"2566319.87475586"	"HCD"	"MS2"	"6.551243"	"126.9"	"100.000"	"50.2362"	"15423"	"15423"	"15406"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"188.4"	""	"179.8"	""	"192.7"	""	"197.6"	""	"218.8"	"224.2"	""	"355"	"26"	"32.000"	"25.000"	"0.0485510198919441"	"21"	"0.003449"	"0.0339"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYEVSLR"	"[K].tYEVSLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"548.81360"	"1096.61992"	"1096.61999"	"-0.06"	"-0.00003"	"6/56"	"6"	"56"	"3127912.14154053"	"HCD"	"MS2"	"3.317808"	"153.2"	"100.000"	"49.9175"	"15304"	"15304"	"15286"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"245.5"	""	"234.7"	""	"223.7"	""	"218.3"	""	"259.9"	"267.5"	""	"355"	"25"	"32.000"	"25.000"	"0.0508391589658418"	"21"	"0.003967"	"0.04086"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASDFISK"	"[K].TASDFISk.[M]"	"K8(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"549.30518"	"1097.60307"	"1097.60401"	"-0.85"	"-0.00047"	"5/68"	"5"	"68"	"1412136.11810303"	"HCD"	"MS2"	"67.55843"	"56.6"	"100.000"	"45.3808"	"13456"	"13456"	"13431"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.8"	""	"72.9"	""	"80.9"	""	"95.9"	"1.1"	"103.5"	"114.2"	""	"390"	"31"	"32.000"	"25.000"	"0.0150672714093662"	"22"	"0.002973"	"0.02843"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDVFLMIR"	"[-].mDVFLmIR.[R]"	"N-Term(Prot)(Acetyl); M1(Oxidation); M6(Oxidation)"	"1"	"1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"549.76929"	"1098.53130"	"1098.53221"	"-0.84"	"-0.00046"	"5/56"	"5"	"56"	"143757.769836426"	"HCD"	"MS2"	"20.32796"	"3.4"	"100.000"	"104.0996"	"36197"	"36197"	"36192"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.0"	""	"6.1"	""	"4.5"	""	"3.4"	""	"7.1"	"7.4"	"NoQuanLabels"	"236"	"18"	"30.000"	"23.000"	"0.19448316220001"	"14"	"0.009363"	"0.1217"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDVFLMIR"	"[-].mDVFLmIR.[R]"	"N-Term(Prot)(Acetyl); M1(Oxidation); M6(Oxidation)"	"1"	"1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"549.76947"	"1098.53166"	"1098.53221"	"-0.50"	"-0.00028"	"4/56"	"4"	"56"	"226275.63067627"	"HCD"	"MS2"	"24.75275"	"2.8"	"100.000"	"104.6201"	"36357"	"36357"	"36351"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.7"	""	"1.8"	""	"4.5"	""	"4.3"	""	"7.8"	"5.2"	"NoQuanLabels"	"235"	"20"	"30.000"	"23.000"	"0.127068489277508"	"14"	"0.007476"	"0.08913"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDVFLMIR"	"[-].mDVFLmIR.[R]"	"N-Term(Prot)(Acetyl); M1(Oxidation); M6(Oxidation)"	"1"	"1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"549.76953"	"1098.53179"	"1098.53221"	"-0.39"	"-0.00021"	"5/56"	"5"	"56"	"145068.127990723"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"104.4933"	"36382"	"36382"	"36377"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.4"	""	"2.2"	""	"5.1"	""	"3.8"	""	"5.1"	"4.8"	"NoQuanLabels"	"235"	"17"	"30.000"	"23.000"	"0.213323090375843"	"14"	"0.007627"	"0.09112"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDVFLMIR"	"[-].mDVFLmIR.[R]"	"N-Term(Prot)(Acetyl); M1(Oxidation); M6(Oxidation)"	"1"	"1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"549.76953"	"1098.53179"	"1098.53221"	"-0.39"	"-0.00021"	"7/56"	"7"	"56"	"156892.670593262"	"HCD"	"MS2"	"10.56695"	"2.4"	"100.000"	"104.3564"	"36276"	"36276"	"36272"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.2"	""	"2.9"	""	"3.2"	""	"4.2"	""	"4.7"	"4.0"	"NoQuanLabels"	"235"	"22"	"30.000"	"23.000"	"0.0695084920156182"	"14"	"0.00344"	"0.03239"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYMSPER"	"[R].sYMSPER.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P36506"	"Dual specificity mitogen-activated protein kinase kinase 2 OS=Rattus norvegicus OX=10116 GN=Map2k2 PE=1 SV=1"	"Q01986; P36506"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2; Dual specificity mitogen-activated protein kinase kinase 2 OS=Rattus norvegicus OX=10116 GN=Map2k2 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"549.77563"	"1098.54399"	"1098.54511"	"-1.02"	"-0.00056"	"6/58"	"6"	"58"	"5997372.40844727"	"HCD"	"MS2"	"14.51871"	"297.8"	"100.000"	"31.2223"	"7700"	"7700"	"7679"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"486.3"	""	"459.8"	""	"457.6"	""	"323.5"	""	"517.0"	"576.8"	""	"266"	"22"	"31.000"	"24.000"	"0.0915907554137887"	"16"	"0.00436"	"0.04624"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYMSPER"	"[R].sYMSPER.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P36506"	"Dual specificity mitogen-activated protein kinase kinase 2 OS=Rattus norvegicus OX=10116 GN=Map2k2 PE=1 SV=1"	"Q01986; P36506"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2; Dual specificity mitogen-activated protein kinase kinase 2 OS=Rattus norvegicus OX=10116 GN=Map2k2 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"549.77594"	"1098.54460"	"1098.54511"	"-0.46"	"-0.00025"	"5/58"	"5"	"58"	"4771406.06176758"	"HCD"	"MS2"	"19.95373"	"257.7"	"100.000"	"31.1391"	"7676"	"7676"	"7659"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"424.4"	""	"389.7"	""	"382.1"	""	"297.8"	""	"475.9"	"472.3"	""	"265"	"14"	"31.000"	"24.000"	"0.500283152976176"	"15"	"0.005369"	"0.06071"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ELLPEIR"	"[K].eLLPEIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD3"	"Nuclear autoantigenic sperm protein OS=Rattus norvegicus OX=10116 GN=Nasp PE=1 SV=1"	"Q66HD3"	"Nuclear autoantigenic sperm protein OS=Rattus norvegicus OX=10116 GN=Nasp PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"549.83887"	"1098.67046"	"1098.67203"	"-1.43"	"-0.00078"	"10/56"	"10"	"56"	"749073.875061035"	"HCD"	"MS2"	"28.74241"	"32.9"	"100.000"	"74.7194"	"25349"	"25349"	"25331"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.9"	""	"34.6"	""	"44.3"	""	"56.5"	"0.6"	"70.2"	"66.9"	""	"243"	"25"	"30.000"	"23.000"	"0.0366080231938614"	""	"0.006685"	"0.07527"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPEIR"	"[K].eLLPEIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD3"	"Nuclear autoantigenic sperm protein OS=Rattus norvegicus OX=10116 GN=Nasp PE=1 SV=1"	"Q66HD3"	"Nuclear autoantigenic sperm protein OS=Rattus norvegicus OX=10116 GN=Nasp PE=1 SV=1"	"0"	"2"	"2"	"0.3611"	"0.0000"	"1"	"1"	"3"	"549.83929"	"1098.67131"	"1098.67203"	"-0.65"	"-0.00036"	"5/56"	"5"	"56"	"758897.598571777"	"HCD"	"MS2"	"19.6643"	"31.4"	"100.000"	"74.5660"	"25300"	"25300"	"25286"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.4"	""	"28.9"	""	"41.8"	""	"59.3"	""	"61.0"	"68.4"	""	"237"	"36"	"30.000"	"23.000"	"0.00291553561091494"	""	"0.003967"	"0.04252"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"550.26074"	"1099.51421"	"1099.51789"	"-3.35"	"-0.00184"	"5/56"	"5"	"56"	"303868.756713867"	"HCD"	"MS2"	"42.28923"	"9.5"	"100.000"	"90.9668"	"31793"	"31793"	"31777"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.8"	""	"11.7"	""	"12.5"	""	"17.0"	""	"15.6"	"21.1"	""	"174"	"19"	"29.000"	"22.000"	"0.117089850802867"	"20"	"0.005183"	"0.05884"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"550.26135"	"1099.51543"	"1099.51789"	"-2.24"	"-0.00123"	"4/56"	"4"	"56"	"244035.673339844"	"HCD"	"MS2"	"53.57933"	"10.3"	"100.000"	"84.4009"	"29236"	"29236"	"29216"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.8"	""	"13.0"	""	"16.4"	""	"18.0"	""	"17.0"	"21.0"	""	"175"	"18"	"29.000"	"22.000"	"0.13182811829134"	""	"0.003358"	"0.03232"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.1579"	"0.0000"	"1"	"1"	"1"	"550.26141"	"1099.51555"	"1099.51789"	"-2.13"	"-0.00117"	"4/56"	"4"	"56"	"225003.535217285"	"HCD"	"MS2"	"23.89506"	"8.3"	"100.000"	"90.5471"	"31630"	"31630"	"31611"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.6"	""	"9.9"	""	"11.0"	""	"14.6"	""	"13.4"	"13.8"	""	"175"	"19"	"29.000"	"22.000"	"0.100001854294105"	""	"0.003449"	"0.03391"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.1905"	"0.0000"	"1"	"1"	"1"	"550.26166"	"1099.51604"	"1099.51789"	"-1.69"	"-0.00093"	"4/56"	"4"	"56"	"170912.822509766"	"HCD"	"MS2"	"40.61019"	"6.7"	"100.000"	"93.4700"	"32760"	"32760"	"32749"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.2"	""	"8.7"	""	"7.6"	""	"12.9"	""	"10.4"	"11.4"	""	"187"	"21"	"29.000"	"22.000"	"0.0756504665731787"	""	"0.009021"	"0.1166"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.2381"	"0.0000"	"1"	"1"	"1"	"550.26178"	"1099.51628"	"1099.51789"	"-1.46"	"-0.00081"	"4/56"	"4"	"56"	"223604.728088379"	"HCD"	"MS2"	"37.39063"	"8.1"	"100.000"	"91.1800"	"31882"	"31882"	"31865"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.3"	""	"10.9"	""	"7.7"	""	"14.9"	""	"15.5"	"17.5"	""	"186"	"21"	"29.000"	"22.000"	"0.0819375451897453"	""	"0.00413"	"0.04528"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"550.26178"	"1099.51628"	"1099.51789"	"-1.46"	"-0.00081"	"3/56"	"3"	"56"	"401433.24798584"	"HCD"	"MS2"	"58.23315"	"13.7"	"100.000"	"85.0398"	"29490"	"29490"	"29473"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.7"	""	"17.1"	""	"19.9"	""	"20.9"	"1.8"	"26.8"	"25.8"	""	"186"	"9"	"29.000"	"22.000"	"1.31063858253235"	"17"	"0.007627"	"0.09351"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"550.26190"	"1099.51653"	"1099.51789"	"-1.24"	"-0.00068"	"4/56"	"4"	"56"	"211944.158874512"	"HCD"	"MS2"	"42.52917"	"8.5"	"100.000"	"86.8167"	"30182"	"30182"	"30160"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.4"	""	"10.8"	""	"12.9"	""	"10.1"	""	"16.7"	"16.1"	""	"185"	"22"	"29.000"	"22.000"	"0.0578284740817509"	""	"0.001728"	"0.02005"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.5161"	"0.0000"	"1"	"1"	"1"	"550.26190"	"1099.51653"	"1099.51789"	"-1.24"	"-0.00068"	"5/56"	"5"	"56"	"309927.576843262"	"HCD"	"MS2"	"55.19547"	"9.9"	"100.000"	"88.3906"	"30795"	"30795"	"30779"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.0"	""	"14.4"	""	"15.1"	""	"17.4"	""	"17.2"	"20.2"	""	"185"	"31"	"29.000"	"22.000"	"0.00696853896453688"	""	"0.0006732"	"0.008647"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.4474"	"0.0000"	"1"	"1"	"1"	"550.26196"	"1099.51665"	"1099.51789"	"-1.13"	"-0.00062"	"6/56"	"6"	"56"	"842435.893371582"	"HCD"	"MS2"	"8.746484"	"21.0"	"100.000"	"77.1810"	"26352"	"26352"	"26333"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.8"	""	"18.4"	""	"25.2"	""	"50.2"	""	"39.9"	"46.0"	""	"185"	"38"	"29.000"	"22.000"	"0.00131868702408202"	""	"0.0008629"	"0.009519"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.1739"	"0.0000"	"1"	"1"	"1"	"550.26215"	"1099.51702"	"1099.51789"	"-0.80"	"-0.00044"	"4/56"	"4"	"56"	"198114.515319824"	"HCD"	"MS2"	"43.36875"	"9.2"	"100.000"	"84.7159"	"29361"	"29361"	"29345"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.2"	""	"8.6"	""	"11.8"	""	"17.9"	""	"20.6"	"13.3"	""	"190"	"23"	"29.000"	"22.000"	"0.0444348384222838"	""	"0.001886"	"0.02167"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.0952"	"0.0000"	"1"	"1"	"1"	"550.26215"	"1099.51702"	"1099.51789"	"-0.80"	"-0.00044"	"5/56"	"5"	"56"	"151033.983520508"	"HCD"	"MS2"	"48.25473"	"5.2"	"100.000"	"94.8149"	"33230"	"33230"	"33214"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.7"	""	"6.4"	""	"9.4"	""	"12.1"	""	"9.7"	"5.2"	""	"190"	"21"	"29.000"	"22.000"	"0.0677210378620193"	""	"0.001546"	"0.01949"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"550.26221"	"1099.51714"	"1099.51789"	"-0.69"	"-0.00038"	"4/56"	"4"	"56"	"182804.602783203"	"HCD"	"MS2"	"32.30063"	"7.7"	"100.000"	"86.7958"	"30177"	"30177"	"30158"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.0"	""	"10.4"	""	"9.3"	""	"12.6"	""	"12.6"	"15.6"	""	"188"	"20"	"29.000"	"22.000"	"0.0964112810676323"	""	"0.006958"	"0.08085"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.4390"	"0.0000"	"1"	"1"	"1"	"550.26221"	"1099.51714"	"1099.51789"	"-0.69"	"-0.00038"	"5/56"	"5"	"56"	"1355293.96173096"	"HCD"	"MS2"	"32.54229"	"34.8"	"100.000"	"76.8764"	"26228"	"26228"	"26211"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.4"	""	"35.7"	""	"40.0"	""	"73.7"	""	"66.6"	"76.6"	""	"188"	"41"	"29.000"	"22.000"	"0.000811199834900952"	""	"0.001374"	"0.01687"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.2105"	"0.0000"	"1"	"1"	"1"	"550.26227"	"1099.51726"	"1099.51789"	"-0.58"	"-0.00032"	"4/56"	"4"	"56"	"261442.23248291"	"HCD"	"MS2"	"34.06842"	"9.7"	"100.000"	"90.4265"	"31579"	"31579"	"31568"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.0"	""	"12.1"	""	"16.0"	""	"17.4"	""	"13.6"	"18.0"	""	"188"	"19"	"29.000"	"22.000"	"0.130055239623347"	""	"0.00413"	"0.04561"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"550.26227"	"1099.51726"	"1099.51789"	"-0.58"	"-0.00032"	"4/56"	"4"	"56"	"242721.998168945"	"HCD"	"MS2"	"39.39957"	"9.4"	"100.000"	"84.7967"	"29392"	"29392"	"29371"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.3"	""	"12.4"	""	"10.3"	""	"16.8"	""	"16.8"	"19.8"	""	"188"	"16"	"29.000"	"22.000"	"0.218337258857568"	"15"	"0.004817"	"0.05077"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IDEFESM"	"[R].iDEFESM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"550.26227"	"1099.51726"	"1099.51789"	"-0.58"	"-0.00032"	"4/58"	"4"	"58"	"242721.998168945"	"HCD"	"MS2"	"39.39957"	"9.4"	"100.000"	"84.7967"	"29392"	"29392"	"29371"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.3"	""	"12.4"	""	"10.3"	""	"16.8"	""	"16.8"	"19.8"	""	"188"	"16"	"29.000"	"22.000"	"0.218337258857568"	"15"	"0.00736"	"0.08614"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.1026"	"0.0000"	"1"	"1"	"1"	"550.26227"	"1099.51726"	"1099.51789"	"-0.58"	"-0.00032"	"5/58"	"5"	"58"	"2292956.97564697"	"HCD"	"MS2"	"6.398982"	"37.7"	"100.000"	"97.8956"	"34305"	"34305"	"34300"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.3"	""	"35.1"	""	"40.4"	""	"66.1"	""	"92.3"	"93.3"	""	"188"	"39"	"29.000"	"22.000"	"0.00127094820940262"	""	"0.001978"	"0.02206"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"550.26233"	"1099.51738"	"1099.51789"	"-0.47"	"-0.00026"	"5/56"	"5"	"56"	"307056.7890625"	"HCD"	"MS2"	"47.11818"	"9.9"	"100.000"	"88.0954"	"30684"	"30684"	"30665"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.1"	""	"9.4"	""	"10.7"	""	"20.8"	""	"19.4"	"20.9"	""	"188"	"18"	"29.000"	"22.000"	"0.148979960091345"	""	"0.003111"	"0.03143"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.1905"	"0.0000"	"1"	"1"	"1"	"550.26233"	"1099.51738"	"1099.51789"	"-0.47"	"-0.00026"	"4/56"	"4"	"56"	"335146.432495117"	"HCD"	"MS2"	"51.98947"	"9.6"	"100.000"	"88.4384"	"30817"	"30817"	"30802"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.1"	""	"12.7"	""	"12.1"	""	"14.1"	""	"18.6"	"23.5"	""	"188"	"21"	"29.000"	"22.000"	"0.0813069843649152"	""	"0.002973"	"0.02831"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"550.26233"	"1099.51738"	"1099.51789"	"-0.47"	"-0.00026"	"5/56"	"5"	"56"	"325105.658081055"	"HCD"	"MS2"	"50.1142"	"14.9"	"100.000"	"85.4690"	"29655"	"29655"	"29633"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.9"	""	"22.1"	""	"18.4"	""	"24.7"	""	"26.7"	"30.3"	""	"188"	"11"	"29.000"	"22.000"	"0.762303394382611"	"19"	"0.007018"	"0.08126"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IDEFESM"	"[R].iDEFESM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"550.26239"	"1099.51750"	"1099.51789"	"-0.35"	"-0.00019"	"5/58"	"5"	"58"	"191324.693847656"	"HCD"	"MS2"	"43.79047"	"4.1"	"100.000"	"98.6608"	"34559"	"34559"	"34551"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.3"	""	""	""	"5.4"	"1.9"	"7.8"	""	"9.3"	"9.1"	""	"188"	"25"	"29.000"	"22.000"	"0.0325183015156555"	"14"	"0.009417"	"0.1237"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"550.26239"	"1099.51750"	"1099.51789"	"-0.35"	"-0.00019"	"5/56"	"5"	"56"	"191324.693847656"	"HCD"	"MS2"	"43.79047"	"4.1"	"100.000"	"98.6608"	"34559"	"34559"	"34551"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.3"	""	""	""	"5.4"	"1.9"	"7.8"	""	"9.3"	"9.1"	""	"188"	"25"	"29.000"	"22.000"	"0.0326683991756614"	"14"	"0.009594"	"0.1269"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"550.26239"	"1099.51750"	"1099.51789"	"-0.35"	"-0.00019"	"4/56"	"4"	"56"	"353558.969726563"	"HCD"	"MS2"	"61.83582"	"13.7"	"100.000"	"85.3429"	"29606"	"29606"	"29580"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.7"	""	"16.8"	""	"17.7"	""	"22.2"	""	"23.8"	"30.5"	""	"188"	"16"	"29.000"	"22.000"	"0.26249912107631"	"13"	"0.004022"	"0.0426"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IDEFESM"	"[R].iDEFESM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"550.26239"	"1099.51750"	"1099.51789"	"-0.35"	"-0.00019"	"4/58"	"4"	"58"	"353558.969726563"	"HCD"	"MS2"	"61.83582"	"13.7"	"100.000"	"85.3429"	"29606"	"29606"	"29580"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.7"	""	"16.8"	""	"17.7"	""	"22.2"	""	"23.8"	"30.5"	""	"188"	"16"	"29.000"	"22.000"	"0.26249912107631"	"13"	"0.006739"	"0.07593"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.1026"	"0.0000"	"1"	"1"	"1"	"550.26239"	"1099.51750"	"1099.51789"	"-0.35"	"-0.00019"	"5/58"	"5"	"58"	"3876918.95874023"	"HCD"	"MS2"	"0.1815126"	"61.9"	"100.000"	"98.1474"	"34389"	"34389"	"34385"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.4"	""	"60.1"	""	"63.6"	""	"108.7"	""	"153.7"	"149.4"	""	"188"	"39"	"29.000"	"22.000"	"0.00121374611719672"	""	"0.000936"	"0.01134"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.1778"	"0.0000"	"1"	"1"	"1"	"550.26245"	"1099.51763"	"1099.51789"	"-0.24"	"-0.00013"	"5/58"	"5"	"58"	"381528.612365723"	"HCD"	"MS2"	"14.93878"	"9.1"	"100.000"	"98.4468"	"34520"	"34520"	"34515"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.1"	""	"9.1"	""	"9.1"	""	"14.9"	""	"24.7"	"22.8"	""	"188"	"45"	"29.000"	"22.000"	"0.000282571172447054"	""	"0.0001301"	"0.004884"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.1905"	"0.0000"	"1"	"1"	"1"	"550.26245"	"1099.51763"	"1099.51789"	"-0.24"	"-0.00013"	"5/58"	"5"	"58"	"631840.001586914"	"HCD"	"MS2"	"6.423175"	"12.9"	"100.000"	"98.3985"	"34474"	"34474"	"34470"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.2"	""	"12.9"	""	"13.5"	""	"25.1"	""	"27.6"	"34.9"	""	"188"	"42"	"29.000"	"22.000"	"0.000608314058803668"	""	"0.0003538"	"0.006797"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.0952"	"0.0000"	"1"	"1"	"1"	"550.26245"	"1099.51763"	"1099.51789"	"-0.24"	"-0.00013"	"5/58"	"5"	"58"	"2671720.45294189"	"HCD"	"MS2"	"1.061463"	"44.5"	"100.000"	"98.1952"	"34437"	"34437"	"34432"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.4"	""	"41.5"	""	"38.3"	""	"82.9"	""	"116.8"	"106.3"	""	"188"	"42"	"29.000"	"22.000"	"0.000599967677019116"	""	"0.001211"	"0.0151"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.1026"	"0.0000"	"1"	"1"	"1"	"550.26245"	"1099.51763"	"1099.51789"	"-0.24"	"-0.00013"	"5/58"	"5"	"58"	"3429378.39343262"	"HCD"	"MS2"	"4.140037"	"54.5"	"100.000"	"97.9315"	"34346"	"34346"	"34338"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.6"	""	"50.0"	""	"52.6"	""	"106.8"	""	"137.4"	"125.8"	""	"188"	"39"	"29.000"	"22.000"	"0.0012363113422607"	""	"0.000936"	"0.01139"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.1905"	"0.0000"	"1"	"1"	"1"	"550.26257"	"1099.51787"	"1099.51789"	"-0.02"	"-0.00001"	"4/56"	"4"	"56"	"183204.379638672"	"HCD"	"MS2"	"46.77876"	"7.0"	"100.000"	"92.0378"	"32199"	"32199"	"32192"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.8"	""	"9.2"	""	"9.1"	""	"12.7"	""	"10.6"	"13.5"	""	"187"	"21"	"29.000"	"22.000"	"0.0704387452091026"	""	"0.003507"	"0.03615"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"550.26257"	"1099.51787"	"1099.51789"	"-0.02"	"-0.00001"	"5/56"	"5"	"56"	"255848.466369629"	"HCD"	"MS2"	"55.17788"	"8.9"	"100.000"	"88.1371"	"30705"	"30705"	"30690"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.5"	""	"12.1"	""	"7.7"	""	"15.9"	""	"18.7"	"20.6"	""	"187"	"21"	"29.000"	"22.000"	"0.0677347622670116"	""	"0.002147"	"0.02281"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"550.26257"	"1099.51787"	"1099.51789"	"-0.02"	"-0.00001"	"4/58"	"4"	"58"	"384010.020568848"	"HCD"	"MS2"	"51.45638"	"10.7"	"100.000"	"97.6723"	"34257"	"34257"	"34238"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.0"	""	"13.8"	""	"16.9"	""	"15.8"	""	"24.7"	"20.3"	""	"187"	"21"	"29.000"	"22.000"	"0.0671137662338723"	""	"0.006739"	"0.07656"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"550.26270"	"1099.51811"	"1099.51789"	"0.20"	"0.00011"	"5/56"	"5"	"56"	"248603.067016602"	"HCD"	"MS2"	"41.2216"	"9.8"	"100.000"	"91.7758"	"32100"	"32100"	"32087"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.7"	""	"9.4"	""	"14.0"	""	"15.1"	""	"16.4"	"22.7"	""	"180"	"9"	"29.000"	"22.000"	"1.11748707683317"	"18"	"0.006379"	"0.07222"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.4390"	"0.0000"	"1"	"1"	"1"	"550.26270"	"1099.51811"	"1099.51789"	"0.20"	"0.00011"	"5/56"	"5"	"56"	"1326347.86260986"	"HCD"	"MS2"	"33.53139"	"32.2"	"100.000"	"77.0070"	"26272"	"26272"	"26249"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.5"	""	"34.6"	""	"33.7"	""	"75.5"	""	"63.7"	"58.2"	""	"180"	"41"	"29.000"	"22.000"	"0.000743434154619461"	""	"0.0008629"	"0.009612"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.2083"	"0.0000"	"1"	"1"	"1"	"550.26276"	"1099.51824"	"1099.51789"	"0.31"	"0.00017"	"5/56"	"5"	"56"	"221082.754333496"	"HCD"	"MS2"	"55.92019"	"7.3"	"100.000"	"91.2606"	"31908"	"31908"	"31900"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.4"	""	"7.3"	""	"7.2"	""	"12.8"	""	"16.6"	"15.0"	""	"180"	"24"	"29.000"	"22.000"	"0.037604732998196"	""	"0.002547"	"0.02516"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IDEFESM"	"[R].iDEFESM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"550.26276"	"1099.51824"	"1099.51789"	"0.31"	"0.00017"	"4/58"	"4"	"58"	"570805.899475098"	"HCD"	"MS2"	"24.44446"	"15.1"	"100.000"	"98.2549"	"34427"	"34427"	"34419"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.7"	""	"13.8"	""	"16.9"	""	"31.3"	""	"37.4"	"33.8"	""	"180"	"6"	"29.000"	"22.000"	"2.38914500577798"	"16"	"0.008641"	"0.1068"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"1"	"550.26288"	"1099.51848"	"1099.51789"	"0.53"	"0.00029"	"5/56"	"5"	"56"	"238534.617797852"	"HCD"	"MS2"	"50.53396"	"8.7"	"100.000"	"97.6409"	"34220"	"34220"	"34213"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.1"	""	"10.0"	""	"12.4"	""	"15.3"	""	"17.1"	"16.9"	""	"184"	"16"	"29.000"	"22.000"	"0.206913023736892"	""	"0.003967"	"0.04128"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.2105"	"0.0000"	"1"	"1"	"1"	"550.26343"	"1099.51958"	"1099.51789"	"1.53"	"0.00084"	"4/56"	"4"	"56"	"215267.103149414"	"HCD"	"MS2"	"53.01122"	"9.1"	"100.000"	"84.4263"	"29247"	"29247"	"29227"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.7"	""	"11.8"	""	"13.2"	""	"17.6"	""	"13.8"	"15.9"	""	"181"	"19"	"29.000"	"22.000"	"0.117394724024048"	""	"0.002547"	"0.02531"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGMSR"	"[K].gPSYGmSR.[E]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"550.27332"	"1099.53935"	"1099.54036"	"-0.91"	"-0.00050"	"7/64"	"7"	"64"	"25436425.8267822"	"HCD"	"MS2"	"0"	"586.6"	"72.927"	"22.3901"	"4139"	"4139"	"4126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"692.6"	"3.5"	"697.2"	""	"782.2"	""	"1163.4"	"1.2"	"1264.7"	"961.8"	""	"224"	"18"	"30.000"	"23.000"	"0.159668050483445"	""	"0.00736"	"0.08786"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGMSR"	"[K].gPSYGmSR.[E]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.2105"	"0.0000"	"1"	"1"	"1"	"550.27362"	"1099.53996"	"1099.54036"	"-0.36"	"-0.00020"	"7/64"	"7"	"64"	"21594299.5727539"	"HCD"	"MS2"	"0.9051458"	"710.1"	"100.000"	"22.4176"	"4134"	"4134"	"4118"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"870.4"	""	"825.9"	""	"963.8"	""	"1397.2"	"1.0"	"1536.6"	"1141.7"	""	"221"	"19"	"30.000"	"23.000"	"0.136572191395618"	""	"0.004942"	"0.05428"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEGIEFI"	"[K].yEGIEFI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4Y7"	"Soluble calcium-activated nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Cant1 PE=1 SV=1"	"Q8K4Y7"	"Soluble calcium-activated nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Cant1 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"550.29633"	"1099.58537"	"1099.58729"	"-1.74"	"-0.00096"	"5/56"	"5"	"56"	"291003.98223877"	"HCD"	"MS2"	"25.76061"	"6.8"	"100.000"	"109.6975"	"38287"	"38287"	"38280"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.9"	""	"8.8"	""	"9.1"	""	"11.8"	""	"11.6"	"9.7"	""	"325"	"20"	"32.000"	"25.000"	"0.147520836153955"	"17"	"0.00413"	"0.04579"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEGIEFI"	"[K].yEGIEFI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4Y7"	"Soluble calcium-activated nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Cant1 PE=1 SV=1"	"Q8K4Y7"	"Soluble calcium-activated nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Cant1 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"550.29669"	"1099.58611"	"1099.58729"	"-1.08"	"-0.00059"	"6/56"	"6"	"56"	"349728.337097168"	"HCD"	"MS2"	"22.10783"	"7.5"	"100.000"	"109.7531"	"38202"	"38202"	"38195"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.3"	""	"8.4"	""	"9.8"	""	"10.0"	""	"14.6"	"11.8"	""	"327"	"30"	"32.000"	"25.000"	"0.0162374473916823"	"17"	"0.001465"	"0.01823"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQGPQTAR"	"[K].lQGPQTAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"550.32422"	"1099.64116"	"1099.64212"	"-0.87"	"-0.00048"	"5/68"	"5"	"68"	"2964779.52807617"	"HCD"	"MS2"	"37.99963"	"138.7"	"100.000"	"27.7096"	"6288"	"6288"	"6263"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"291.8"	""	"141.7"	""	"151.3"	""	"168.8"	""	"352.5"	"210.3"	""	"401"	"28"	"33.000"	"26.000"	"0.033198187767564"	"24"	"0.0003538"	"0.007153"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQGPQTAR"	"[K].lQGPQTAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"550.32434"	"1099.64141"	"1099.64212"	"-0.65"	"-0.00036"	"7/68"	"7"	"68"	"2858456.57678223"	"HCD"	"MS2"	"33.75754"	"137.5"	"100.000"	"27.7789"	"6301"	"6301"	"6278"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"285.6"	""	"142.1"	""	"152.7"	""	"164.2"	""	"339.8"	"228.9"	""	"401"	"28"	"33.000"	"26.000"	"0.0314133589556684"	"22"	"0.001036"	"0.0135"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPEAVR"	"[R].vLSPEAVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"550.33716"	"1099.66704"	"1099.66727"	"-0.21"	"-0.00012"	"5/60"	"5"	"60"	"2293645.20336914"	"HCD"	"MS2"	"0"	"92.3"	"100.000"	"47.9263"	"14492"	"14492"	"14474"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"134.9"	""	"112.0"	""	"137.2"	""	"151.8"	""	"162.1"	"182.4"	""	"334"	"38"	"32.000"	"25.000"	"0.00243061666457189"	""	"0"	"0.003319"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPEAVR"	"[R].vLSPEAVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"550.33734"	"1099.66741"	"1099.66727"	"0.12"	"0.00007"	"5/60"	"5"	"60"	"2063019.95196533"	"HCD"	"MS2"	"0"	"89.9"	"100.000"	"48.2064"	"14594"	"14594"	"14574"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"120.8"	""	"122.1"	""	"122.4"	""	"150.0"	"1.8"	"163.5"	"170.9"	""	"334"	"38"	"32.000"	"25.000"	"0.0024815125226193"	""	"0.0023"	"0.02407"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLVPATDR"	"[R].vLVPATDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"550.33740"	"1099.66753"	"1099.66727"	"0.23"	"0.00013"	"7/58"	"7"	"58"	"2255449.73217773"	"HCD"	"MS2"	"0"	"93.0"	"100.000"	"46.8451"	"14051"	"14051"	"14030"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"122.2"	""	"111.2"	""	"133.7"	""	"156.0"	""	"179.6"	"179.5"	""	"334"	"22"	"32.000"	"25.000"	"0.105127532537152"	""	"0.0002479"	"0.005299"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLVPATDR"	"[R].vLVPATDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"1"	"550.33777"	"1099.66826"	"1099.66727"	"0.90"	"0.00049"	"6/58"	"6"	"58"	"2021441.72528076"	"HCD"	"MS2"	"12.31214"	"86.1"	"100.000"	"47.0750"	"14133"	"14133"	"14113"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"113.8"	""	"113.3"	""	"124.7"	""	"136.9"	"4.0"	"159.0"	"164.0"	""	"343"	"23"	"32.000"	"25.000"	"0.0948995437304989"	""	"0.001211"	"0.01543"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVEMYR"	"[K].sSVEMYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"550.78345"	"1100.55962"	"1100.56076"	"-1.04"	"-0.00057"	"6/54"	"6"	"54"	"2787641.42755127"	"HCD"	"MS2"	"26.25343"	"141.7"	"100.000"	"35.3339"	"9376"	"9376"	"9350"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"225.6"	""	"213.2"	""	"216.0"	""	"145.8"	""	"249.8"	"293.1"	""	"348"	"25"	"32.000"	"25.000"	"0.055277608829306"	"18"	"0.003653"	"0.03781"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVEMYR"	"[K].sSVEMYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"550.78387"	"1100.56047"	"1100.56076"	"-0.26"	"-0.00014"	"9/54"	"9"	"54"	"2582394.29876709"	"HCD"	"MS2"	"35.59581"	"156.0"	"100.000"	"35.4091"	"9401"	"9401"	"9378"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"206.2"	""	"214.1"	""	"204.7"	""	"238.6"	""	"302.6"	"315.0"	""	"348"	"21"	"32.000"	"25.000"	"0.133520899148957"	"17"	"0.002871"	"0.02684"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTEGVYR"	"[K].fTEGVYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"550.80005"	"1100.59282"	"1100.59378"	"-0.87"	"-0.00048"	"5/50"	"5"	"50"	"2432968.85375977"	"HCD"	"MS2"	"26.46378"	"115.9"	"100.000"	"49.7866"	"15239"	"15239"	"15217"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"134.5"	""	"163.5"	""	"199.0"	""	"220.0"	""	"178.2"	"202.3"	""	"385"	"22"	"32.000"	"25.000"	"0.11051741897491"	"14"	"0.00447"	"0.04721"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTEGVYR"	"[K].fTEGVYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"550.80011"	"1100.59294"	"1100.59378"	"-0.76"	"-0.00042"	"5/50"	"5"	"50"	"3180939.88293457"	"HCD"	"MS2"	"16.69142"	"150.8"	"100.000"	"49.4612"	"15118"	"15118"	"15095"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"177.1"	""	"225.2"	""	"280.6"	""	"273.1"	"1.1"	"222.9"	"244.9"	""	"398"	"25"	"32.000"	"25.000"	"0.0683680316320751"	"18"	"0.003922"	"0.04022"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTEGVYR"	"[K].fTEGVYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"550.80035"	"1100.59343"	"1100.59378"	"-0.31"	"-0.00017"	"5/50"	"5"	"50"	"4739362.68133545"	"HCD"	"MS2"	"0"	"223.4"	"100.000"	"49.7608"	"15240"	"15240"	"15222"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"254.9"	""	"312.7"	""	"396.7"	""	"428.2"	""	"317.4"	"406.9"	""	"398"	"23"	"32.000"	"25.000"	"0.101824685272521"	"14"	"0.004942"	"0.05301"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTEGVYR"	"[K].fTEGVYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"550.80042"	"1100.59355"	"1100.59378"	"-0.20"	"-0.00011"	"5/50"	"5"	"50"	"5527259.71569824"	"HCD"	"MS2"	"0.4585506"	"264.1"	"100.000"	"50.0839"	"15360"	"15360"	"15342"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"316.7"	""	"361.1"	""	"455.2"	""	"485.5"	"2.0"	"396.3"	"481.2"	""	"398"	"26"	"32.000"	"25.000"	"0.0543066578778801"	"18"	"0.00413"	"0.04575"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MENAHTK"	"[-].mENAHTk.[T]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"551.28125"	"1101.55522"	"1101.55601"	"-0.71"	"-0.00039"	"6/64"	"6"	"64"	"3052458.74810791"	"HCD"	"MS2"	"22.83116"	"145.8"	"100.000"	"24.8938"	"5147"	"5147"	"5135"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"201.3"	""	"169.7"	""	"181.4"	""	"243.3"	""	"291.6"	"300.1"	""	"292"	"12"	"31.000"	"24.000"	"1.00775011360675"	"16"	"0.006958"	"0.08084"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSSSSYR"	"[R].sVSSSSYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"551.29004"	"1101.57280"	"1101.57377"	"-0.88"	"-0.00048"	"6/66"	"6"	"66"	"13013706.3435059"	"HCD"	"MS2"	"0"	"527.7"	"100.000"	"23.4893"	"4589"	"4589"	"4572"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"333.4"	""	"608.3"	""	"401.2"	""	"1112.2"	"4.2"	"1434.3"	"1142.7"	""	"389"	"36"	"32.000"	"25.000"	"0.00444548967256522"	"16"	"0.0001301"	"0.004906"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSSSSYR"	"[R].sVSSSSYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"551.29034"	"1101.57341"	"1101.57377"	"-0.32"	"-0.00018"	"6/66"	"6"	"66"	"12142457.8060303"	"HCD"	"MS2"	"0"	"517.0"	"100.000"	"23.5649"	"4602"	"4602"	"4585"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"308.8"	""	"615.1"	""	"394.2"	""	"1124.2"	""	"1364.7"	"1128.0"	""	"385"	"36"	"32.000"	"25.000"	"0.00443027549851137"	"17"	"0.0001301"	"0.004398"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANSSGLPR"	"[R].aANSSGLPR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJS5"	"SH3 domain-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Sh3bp4 PE=1 SV=2"	"Q9JJS5"	"SH3 domain-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Sh3bp4 PE=1 SV=2"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"551.31372"	"1101.62016"	"1101.62139"	"-1.11"	"-0.00061"	"8/78"	"8"	"78"	"826287.483032227"	"HCD"	"MS2"	"61.29998"	"59.5"	"100.000"	"26.2530"	"5681"	"5681"	"5663"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.9"	""	"76.3"	""	"75.3"	""	"113.2"	""	"118.1"	"109.7"	""	"566"	"37"	"34.000"	"27.000"	"0.00549270703358756"	"22"	"0"	"0.001047"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVQAAQAR"	"[K].eVQAAQAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"551.31372"	"1101.62016"	"1101.62139"	"-1.11"	"-0.00061"	"6/66"	"6"	"66"	"2690680.51818848"	"HCD"	"MS2"	"12.31338"	"130.1"	"100.000"	"21.9194"	"3948"	"3948"	"3926"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"170.8"	""	"176.1"	""	"141.7"	""	"229.8"	""	"251.8"	"265.8"	""	"566"	"42"	"34.000"	"27.000"	"0.00182720146816807"	""	"0"	"0.002932"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVQAAQAR"	"[K].eVQAAQAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"551.31396"	"1101.62065"	"1101.62139"	"-0.67"	"-0.00037"	"6/66"	"6"	"66"	"2623708.1161499"	"HCD"	"MS2"	"15.41619"	"119.0"	"100.000"	"21.9609"	"3947"	"3947"	"3930"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"165.6"	""	"155.7"	""	"135.2"	""	"198.6"	"0.0"	"235.3"	"238.7"	""	"565"	"45"	"34.000"	"27.000"	"0.000883117421212519"	""	"0"	"0.002655"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQNDAGVR"	"[K].iQNDAGVR.[I]"	"N-Term(TMT6plex)"	"2"	"2"	"Q32PX7; Q99PF5"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1;Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q32PX7; Q99PF5"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.5610"	"0.0000"	"1"	"1"	"1"	"551.31409"	"1101.62090"	"1101.62139"	"-0.44"	"-0.00025"	"6/68"	"6"	"68"	"6297894.20019531"	"HCD"	"MS2"	"0"	"273.5"	"100.000"	"28.9146"	"6776"	"6776"	"6758"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"429.9"	""	"339.6"	""	"343.1"	""	"476.1"	"2.7"	"510.3"	"489.0"	""	"565"	"41"	"34.000"	"27.000"	"0.00230153960235887"	""	"0.0001301"	"0.004072"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQNDAGVR"	"[K].iQNDAGVR.[I]"	"N-Term(TMT6plex)"	"2"	"2"	"Q32PX7; Q99PF5"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1;Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q32PX7; Q99PF5"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"551.31464"	"1101.62200"	"1101.62139"	"0.55"	"0.00030"	"6/68"	"6"	"68"	"4889298.60070801"	"HCD"	"MS2"	"5.388365"	"235.7"	"100.000"	"28.9381"	"6773"	"6773"	"6751"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"375.5"	""	"298.0"	""	"302.9"	""	"388.0"	"1.2"	"439.9"	"426.6"	""	"563"	"38"	"34.000"	"27.000"	"0.00469330090333124"	""	"0"	"0.003489"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDELNR"	"[K].lLDELNR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P21704"	"Deoxyribonuclease-1 OS=Rattus norvegicus OX=10116 GN=Dnase1 PE=2 SV=1"	"P21704"	"Deoxyribonuclease-1 OS=Rattus norvegicus OX=10116 GN=Dnase1 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"551.32629"	"1101.64531"	"1101.64654"	"-1.11"	"-0.00061"	"4/52"	"4"	"52"	"2941473.57006836"	"HCD"	"MS2"	"6.302646"	"133.2"	"100.000"	"47.5563"	"14342"	"14342"	"14317"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"199.3"	""	"198.1"	""	"165.7"	""	"210.4"	"0.5"	"239.0"	"248.7"	""	"596"	"20"	"34.000"	"27.000"	"0.266205034152522"	"24"	"0.00918"	"0.12"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGLIHR"	"[R].ynGLIHR.[K]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"368.21149"	"1102.61991"	"1102.62066"	"-0.68"	"-0.00025"	"7/60"	"7"	"60"	"1547232.60656738"	"HCD"	"MS2"	"13.23148"	"75.4"	"100.000"	"40.5330"	"11488"	"11488"	"11459"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"96.3"	""	"97.6"	""	"123.4"	""	"120.6"	""	"150.6"	"130.7"	""	"804"	"25"	"36.000"	"29.000"	"0.117550925589302"	"14"	"0.005617"	"0.06327"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEDLVR"	"[K].eLEDLVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RJQ4"	"NAD-dependent protein deacetylase sirtuin-2 OS=Rattus norvegicus OX=10116 GN=Sirt2 PE=1 SV=1"	"Q5RJQ4"	"NAD-dependent protein deacetylase sirtuin-2 OS=Rattus norvegicus OX=10116 GN=Sirt2 PE=1 SV=1"	"0"	"2"	"2"	"0.3226"	"0.0000"	"1"	"1"	"1"	"551.81812"	"1102.62895"	"1102.63055"	"-1.45"	"-0.00080"	"6/54"	"6"	"54"	"1880974.82110596"	"HCD"	"MS2"	"16.9423"	"86.6"	"100.000"	"68.0490"	"22647"	"22647"	"22626"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"132.6"	""	"111.8"	""	"114.4"	""	"148.3"	""	"156.6"	"157.3"	""	"737"	"31"	"35.000"	"28.000"	"0.027570046093836"	""	"0.003922"	"0.0402"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGTQAAAI"	"[R].iEGTQAAAI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"551.81824"	"1102.62920"	"1102.63055"	"-1.23"	"-0.00068"	"7/68"	"7"	"68"	"1604823.34173584"	"HCD"	"MS2"	"44.34731"	"34.5"	"100.000"	"67.1335"	"22275"	"22275"	"22252"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.5"	""	"35.9"	""	"47.2"	""	"64.2"	"0.1"	"64.7"	"67.9"	""	"737"	"50"	"35.000"	"28.000"	"0.000336075994302653"	"20"	"0.0003538"	"0.007358"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEDLVR"	"[K].eLEDLVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RJQ4"	"NAD-dependent protein deacetylase sirtuin-2 OS=Rattus norvegicus OX=10116 GN=Sirt2 PE=1 SV=1"	"Q5RJQ4"	"NAD-dependent protein deacetylase sirtuin-2 OS=Rattus norvegicus OX=10116 GN=Sirt2 PE=1 SV=1"	"0"	"2"	"2"	"0.3429"	"0.0000"	"1"	"1"	"1"	"551.81854"	"1102.62981"	"1102.63055"	"-0.68"	"-0.00037"	"9/54"	"9"	"54"	"1807906.08123779"	"HCD"	"MS2"	"9.795531"	"85.3"	"100.000"	"68.2100"	"22698"	"22698"	"22678"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"142.7"	""	"114.1"	""	"108.2"	""	"158.7"	""	"139.1"	"144.2"	""	"732"	"35"	"35.000"	"28.000"	"0.0117079561014705"	""	"0.002147"	"0.02287"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEDLVR"	"[K].eLEDLVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RJQ4"	"NAD-dependent protein deacetylase sirtuin-2 OS=Rattus norvegicus OX=10116 GN=Sirt2 PE=1 SV=1"	"Q5RJQ4"	"NAD-dependent protein deacetylase sirtuin-2 OS=Rattus norvegicus OX=10116 GN=Sirt2 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"551.81866"	"1102.63005"	"1102.63055"	"-0.46"	"-0.00025"	"6/54"	"6"	"54"	"1215774.99810791"	"HCD"	"MS2"	"8.456635"	"54.3"	"100.000"	"68.3538"	"22771"	"22771"	"22751"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"92.1"	""	"59.2"	""	"76.9"	""	"80.0"	"0.2"	"98.1"	"107.7"	""	"732"	"15"	"35.000"	"28.000"	"1.03867836440961"	"22"	"0.005119"	"0.05796"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGTQAAAI"	"[R].iEGTQAAAI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"551.81866"	"1102.63005"	"1102.63055"	"-0.46"	"-0.00025"	"7/68"	"7"	"68"	"1558731.54504395"	"HCD"	"MS2"	"50.63022"	"31.0"	"100.000"	"67.2618"	"22312"	"22312"	"22290"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.0"	""	"36.0"	""	"34.5"	""	"54.9"	""	"56.7"	"62.9"	""	"732"	"53"	"35.000"	"28.000"	"0.000198372325886994"	"23"	"0.0001301"	"0.004718"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEDLVR"	"[K].eLEDLVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RJQ4"	"NAD-dependent protein deacetylase sirtuin-2 OS=Rattus norvegicus OX=10116 GN=Sirt2 PE=1 SV=1"	"Q5RJQ4"	"NAD-dependent protein deacetylase sirtuin-2 OS=Rattus norvegicus OX=10116 GN=Sirt2 PE=1 SV=1"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"551.81891"	"1102.63054"	"1102.63055"	"-0.01"	"-0.00001"	"6/54"	"6"	"54"	"995350.588623047"	"HCD"	"MS2"	"3.903316"	"45.5"	"100.000"	"68.5278"	"22828"	"22828"	"22805"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.1"	""	"58.7"	""	"58.3"	""	"78.4"	""	"76.4"	"80.9"	""	"731"	"15"	"35.000"	"28.000"	"1.11144347688468"	"22"	"0.004942"	"0.05517"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLEGQLR"	"[K].aSLEGQLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62835"	"Rab GTPase-binding effector protein 2 OS=Rattus norvegicus OX=10116 GN=Rabep2 PE=1 SV=1"	"Q62835"	"Rab GTPase-binding effector protein 2 OS=Rattus norvegicus OX=10116 GN=Rabep2 PE=1 SV=1"	"0"	"2"	"2"	"0.1724"	"0.0000"	"1"	"1"	"1"	"551.82440"	"1102.64153"	"1102.64179"	"-0.24"	"-0.00013"	"7/64"	"7"	"64"	"1605383.65673828"	"HCD"	"MS2"	"3.216108"	"78.7"	"100.000"	"42.0450"	"12102"	"12102"	"12076"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.5"	""	"86.0"	""	"99.4"	""	"142.1"	"1.0"	"153.2"	"161.6"	""	"722"	"29"	"35.000"	"28.000"	"0.0416396626073414"	""	"0.002937"	"0.02749"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQALAVSR"	"[R].eQALAVSR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"551.82446"	"1102.64165"	"1102.64179"	"-0.13"	"-0.00007"	"6/80"	"6"	"80"	"3403907.3371582"	"HCD"	"MS2"	"3.482909"	"172.9"	"100.000"	"33.5673"	"8655"	"8655"	"8645"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"279.1"	""	"219.0"	""	"231.0"	""	"286.2"	"2.1"	"308.0"	"312.0"	""	"722"	"42"	"35.000"	"28.000"	"0.00235780129505737"	""	"0.0001301"	"0.004053"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLEGQLR"	"[K].aSLEGQLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62835"	"Rab GTPase-binding effector protein 2 OS=Rattus norvegicus OX=10116 GN=Rabep2 PE=1 SV=1"	"Q62835"	"Rab GTPase-binding effector protein 2 OS=Rattus norvegicus OX=10116 GN=Rabep2 PE=1 SV=1"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"1"	"551.82452"	"1102.64177"	"1102.64179"	"-0.02"	"-0.00001"	"6/64"	"6"	"64"	"2018584.65155029"	"HCD"	"MS2"	"9.635075"	"90.2"	"100.000"	"42.1513"	"12135"	"12135"	"12113"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"123.3"	""	"117.5"	""	"113.3"	""	"165.6"	"0.3"	"150.6"	"183.8"	""	"722"	"34"	"35.000"	"28.000"	"0.0145046482716467"	""	"0.002937"	"0.02813"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAAVELTR"	"[R].nAAVELTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P84025"	"Mothers against decapentaplegic homolog 3 OS=Rattus norvegicus OX=10116 GN=Smad3 PE=1 SV=1"	"P84025"	"Mothers against decapentaplegic homolog 3 OS=Rattus norvegicus OX=10116 GN=Smad3 PE=1 SV=1"	"0"	"2"	"2"	"0.1176"	"0.0000"	"1"	"1"	"1"	"551.82452"	"1102.64177"	"1102.64179"	"-0.02"	"-0.00001"	"6/74"	"6"	"74"	"3118922.21154785"	"HCD"	"MS2"	"65.34042"	"176.3"	"100.000"	"36.8656"	"9998"	"9998"	"9969"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"202.5"	""	"190.7"	""	"206.3"	""	"335.1"	""	"350.7"	"390.6"	""	"722"	"17"	"35.000"	"28.000"	"0.733680880947975"	""	"0.003653"	"0.03783"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQALAVSR"	"[R].eQALAVSR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.4750"	"0.0000"	"1"	"1"	"1"	"551.82465"	"1102.64202"	"1102.64179"	"0.21"	"0.00011"	"6/80"	"6"	"80"	"3864152.64099121"	"HCD"	"MS2"	"11.40894"	"193.7"	"100.000"	"33.5581"	"8658"	"8658"	"8640"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"296.8"	""	"256.1"	""	"260.6"	""	"324.0"	"2.4"	"329.8"	"364.1"	""	"722"	"40"	"35.000"	"28.000"	"0.00393103763693369"	""	"0.0002479"	"0.00513"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LIIEETR"	"[K].lIIEETR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XXR3"	"Rho guanine nucleotide exchange factor 6 OS=Rattus norvegicus OX=10116 GN=Arhgef6 PE=1 SV=1"	"Q5XXR3"	"Rho guanine nucleotide exchange factor 6 OS=Rattus norvegicus OX=10116 GN=Arhgef6 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"551.83698"	"1102.66667"	"1102.66694"	"-0.24"	"-0.00013"	"6/52"	"6"	"52"	"1368842.2734375"	"HCD"	"MS2"	"45.24687"	"62.2"	"100.000"	"58.1574"	"18647"	"18647"	"18623"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"95.8"	""	"45.7"	""	"52.7"	""	"82.2"	""	"95.6"	"221.8"	""	"680"	"8"	"35.000"	"28.000"	"5.61667011397865"	"17"	"0.007627"	"0.09126"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAAVVEFQR"	"[M].aAAAVVEFQR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"552.29437"	"1103.58147"	"1103.58438"	"-2.64"	"-0.00146"	"7/74"	"7"	"74"	"470347.323791504"	"HCD"	"MS2"	"31.57546"	"10.8"	"100.000"	"80.5682"	"27712"	"27712"	"27696"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.0"	""	"16.3"	""	"16.2"	""	"17.9"	""	"21.9"	"18.9"	"NoQuanLabels"	"541"	"59"	"34.000"	"27.000"	"3.16349585270875E-05"	"23"	"0"	"0.0001976"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAAVVEFQR"	"[M].aAAAVVEFQR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"2"	"2"	"0.8983"	"0.0000"	"1"	"1"	"1"	"552.29480"	"1103.58232"	"1103.58438"	"-1.87"	"-0.00103"	"7/74"	"7"	"74"	"461725.842102051"	"HCD"	"MS2"	"31.2172"	"11.3"	"100.000"	"80.5720"	"27712"	"27712"	"27691"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.0"	""	"15.2"	""	"16.8"	""	"18.2"	""	"17.7"	"22.6"	"NoQuanLabels"	"541"	"59"	"34.000"	"27.000"	"3.18542415837378E-05"	"22"	"0"	"0.0009557"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAAVVEFQR"	"[M].aAAAVVEFQR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"552.29578"	"1103.58428"	"1103.58438"	"-0.10"	"-0.00005"	"6/74"	"6"	"74"	"587291.738342285"	"HCD"	"MS2"	"3.601712"	"9.7"	"100.000"	"80.8599"	"27829"	"27829"	"27811"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.8"	""	"11.0"	""	"16.1"	""	"17.2"	""	"19.7"	"16.9"	"NoQuanLabels"	"586"	"64"	"34.000"	"27.000"	"1.16109464036844E-05"	"23"	"0"	"0.0002411"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAAVVEFQR"	"[M].aAAAVVEFQR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"552.30042"	"1103.59355"	"1103.58438"	"8.31"	"0.00458"	"7/74"	"7"	"74"	"354032.992553711"	"HCD"	"MS2"	"44.22178"	"10.9"	"100.000"	"80.5121"	"27688"	"27688"	"27661"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.0"	""	"11.1"	""	"14.0"	""	"20.8"	""	"18.7"	"23.3"	"NoQuanLabels"	"646"	"42"	"35.000"	"28.000"	"0.00194626746302017"	"16"	"0.0001301"	"0.004269"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEASIAR"	"[R].dLEASIAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"552.31555"	"1103.62383"	"1103.62580"	"-1.79"	"-0.00099"	"7/64"	"7"	"64"	"2303999.60638428"	"HCD"	"MS2"	"100"	"108.2"	"100.000"	"48.3529"	"14654"	"14654"	"14633"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"149.6"	""	"144.4"	""	"114.5"	""	"202.5"	""	"219.2"	"198.5"	""	"821"	"20"	"36.000"	"29.000"	"0.423948557065053"	"28"	"0.0008629"	"0.009824"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEVDSGR"	"[R].lVEVDSGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"552.31592"	"1103.62456"	"1103.62580"	"-1.13"	"-0.00062"	"6/62"	"6"	"62"	"2955997.52874756"	"HCD"	"MS2"	"11.18596"	"143.0"	"100.000"	"44.0550"	"12920"	"12920"	"12897"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"124.9"	""	"119.9"	""	"93.8"	""	"291.3"	""	"365.5"	"372.3"	""	"834"	"42"	"36.000"	"29.000"	"0.00239406564740456"	"22"	"0.0001301"	"0.004496"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEASIAR"	"[R].dLEASIAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.3400"	"0.0000"	"1"	"1"	"1"	"552.31592"	"1103.62456"	"1103.62580"	"-1.13"	"-0.00062"	"6/64"	"6"	"64"	"3880260.75317383"	"HCD"	"MS2"	"19.59308"	"162.6"	"100.000"	"48.0706"	"14551"	"14551"	"14534"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"218.2"	""	"188.2"	""	"209.8"	""	"279.0"	""	"326.6"	"321.7"	""	"834"	"50"	"36.000"	"29.000"	"0.0003768218305422"	""	"0"	"0.0019"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEVDSGR"	"[R].lVEVDSGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"552.31592"	"1103.62456"	"1103.62580"	"-1.13"	"-0.00062"	"7/62"	"7"	"62"	"2719984.89056396"	"HCD"	"MS2"	"35.25765"	"88.9"	"100.000"	"44.3907"	"13053"	"13053"	"13032"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"93.2"	""	"76.1"	""	"83.0"	""	"164.3"	""	"214.2"	"217.2"	""	"834"	"20"	"36.000"	"29.000"	"0.462525897964421"	"16"	"0.004867"	"0.05125"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEVDSGR"	"[R].lVEVDSGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"552.31622"	"1103.62517"	"1103.62580"	"-0.57"	"-0.00032"	"6/62"	"6"	"62"	"2798326.8102417"	"HCD"	"MS2"	"33.82709"	"129.5"	"100.000"	"44.1612"	"12953"	"12953"	"12923"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.0"	""	"99.2"	""	"109.8"	""	"268.1"	""	"311.0"	"347.1"	""	"832"	"42"	"36.000"	"29.000"	"0.00241597997688866"	"21"	"0"	"0.003652"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLEASIAR"	"[R].dLEASIAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.0278"	"0.0000"	"1"	"1"	"1"	"552.31628"	"1103.62529"	"1103.62580"	"-0.46"	"-0.00026"	"11/64"	"11"	"64"	"6390023.41174316"	"HCD"	"MS2"	"0"	"262.5"	"100.000"	"48.6636"	"14781"	"14781"	"14764"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"346.5"	""	"306.6"	""	"345.8"	""	"450.0"	"1.5"	"508.0"	"531.5"	""	"832"	"36"	"36.000"	"29.000"	"0.00948622301952173"	""	"0.0008629"	"0.009909"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGVFVPR"	"[K].eAGVFVPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"552.32410"	"1103.64092"	"1103.64106"	"-0.13"	"-0.00007"	"6/56"	"6"	"56"	"10573329.3998413"	"HCD"	"MS2"	"0"	"406.0"	"100.000"	"52.4336"	"16318"	"16318"	"16300"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"601.4"	"2.9"	"545.0"	""	"594.9"	""	"648.3"	""	"670.3"	"781.0"	""	"1056"	"41"	"37.000"	"30.000"	"0.00409858477579949"	"26"	"0.0004639"	"0.007877"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGVFVPR"	"[K].eAGVFVPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"552.32422"	"1103.64116"	"1103.64106"	"0.09"	"0.00005"	"6/56"	"6"	"56"	"10373215.3609009"	"HCD"	"MS2"	"0"	"391.3"	"100.000"	"52.1269"	"16205"	"16205"	"16188"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"582.8"	""	"518.3"	""	"585.8"	""	"602.1"	""	"642.1"	"776.9"	""	"1058"	"41"	"37.000"	"30.000"	"0.00405934227872402"	"25"	"0.0002479"	"0.005519"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGVFVPR"	"[K].eAGVFVPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"552.32440"	"1103.64153"	"1103.64106"	"0.42"	"0.00023"	"6/56"	"6"	"56"	"4029161.13348389"	"HCD"	"MS2"	"0"	"171.8"	"100.000"	"51.8461"	"16090"	"16090"	"16069"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"271.0"	""	"221.5"	""	"249.4"	""	"272.6"	""	"287.7"	"325.0"	""	"1046"	"37"	"37.000"	"30.000"	"0.0116279107281068"	"26"	"0.0008629"	"0.01013"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGVFVPR"	"[K].eAGVFVPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"552.32452"	"1103.64177"	"1103.64106"	"0.64"	"0.00036"	"6/56"	"6"	"56"	"3746839.31622314"	"HCD"	"MS2"	"7.271816"	"158.4"	"100.000"	"52.1368"	"16197"	"16197"	"16179"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"254.3"	""	"208.4"	""	"217.5"	""	"253.4"	""	"260.8"	"306.7"	""	"1046"	"37"	"37.000"	"30.000"	"0.0114683698118828"	"26"	"0.0004639"	"0.007577"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEELATK"	"[K].ALEELATk.[R]"	"K8(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.9808"	"0.0000"	"1"	"1"	"1"	"552.32886"	"1103.65044"	"1103.65096"	"-0.47"	"-0.00026"	"6/64"	"6"	"64"	"1067229.6854248"	"HCD"	"MS2"	"60.0215"	"63.4"	"100.000"	"46.0184"	"13716"	"13716"	"13689"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.1"	""	"81.2"	""	"88.1"	""	"106.7"	"0.3"	"114.0"	"120.9"	""	"810"	"52"	"36.000"	"29.000"	"0.000278904180019432"	"17"	"0.001465"	"0.0183"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEELATK"	"[K].ALEELATk.[R]"	"K8(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"552.32904"	"1103.65080"	"1103.65096"	"-0.14"	"-0.00008"	"6/64"	"6"	"64"	"979322.950866699"	"HCD"	"MS2"	"63.98294"	"57.2"	"100.000"	"46.2186"	"13786"	"13786"	"13757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.6"	""	"75.0"	""	"76.2"	""	"99.1"	""	"103.6"	"108.1"	""	"810"	"47"	"36.000"	"29.000"	"0.000726867118867173"	"21"	"0.001374"	"0.0165"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLILTSR"	"[K].dGLILTSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"0"	"2"	"2"	"0.5161"	"0.0000"	"1"	"1"	"1"	"552.33405"	"1103.66081"	"1103.66219"	"-1.25"	"-0.00069"	"6/68"	"6"	"68"	"1442269.79150391"	"HCD"	"MS2"	"21.54752"	"74.8"	"100.000"	"56.3861"	"17926"	"17926"	"17899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"109.5"	""	"88.3"	""	"96.1"	""	"132.8"	""	"133.6"	"153.6"	""	"781"	"31"	"35.000"	"28.000"	"0.0282892242409284"	""	"0.0004639"	"0.007994"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLILTSR"	"[K].dGLILTSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"552.33411"	"1103.66094"	"1103.66219"	"-1.14"	"-0.00063"	"6/68"	"6"	"68"	"2942231.12341309"	"HCD"	"MS2"	"0"	"118.1"	"100.000"	"56.2897"	"17900"	"17900"	"17884"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"167.2"	""	"136.2"	""	"154.1"	""	"221.3"	""	"213.0"	"229.0"	""	"781"	"36"	"35.000"	"28.000"	"0.0106566582418654"	"28"	"0.0001301"	"0.004721"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLILTSR"	"[K].dGLILTSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"552.33411"	"1103.66094"	"1103.66219"	"-1.14"	"-0.00063"	"7/68"	"7"	"68"	"3712603.67871094"	"HCD"	"MS2"	"33.1705"	"114.4"	"100.000"	"56.5937"	"18024"	"18024"	"18006"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"200.6"	""	"143.1"	""	"150.5"	""	"178.2"	""	"195.5"	"215.5"	""	"781"	"19"	"35.000"	"28.000"	"0.504221126346085"	"20"	"0.001546"	"0.01944"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLILTSR"	"[K].dGLILTSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"552.33429"	"1103.66130"	"1103.66219"	"-0.80"	"-0.00044"	"6/68"	"6"	"68"	"3784406.80175781"	"HCD"	"MS2"	"8.846693"	"148.5"	"100.000"	"56.7018"	"18054"	"18054"	"18036"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"202.5"	""	"193.5"	""	"192.3"	""	"260.1"	"1.2"	"254.6"	"303.3"	""	"781"	"31"	"35.000"	"28.000"	"0.0280944825910445"	"26"	"0.0006732"	"0.009199"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDFTSSR"	"[K].yDFTSSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"552.77924"	"1104.55120"	"1104.55230"	"-1.00"	"-0.00055"	"6/56"	"6"	"56"	"1370158.17584229"	"HCD"	"MS2"	"39.05537"	"79.9"	"100.000"	"43.7641"	"12792"	"12792"	"12783"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"108.7"	""	"99.1"	""	"94.8"	""	"124.4"	"0.5"	"158.6"	"172.3"	""	"305"	"8"	"31.000"	"24.000"	"2.20937707665576"	"16"	"0.008777"	"0.113"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEMAAQR"	"[R].aVEMAAQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"552.80505"	"1104.60283"	"1104.60329"	"-0.42"	"-0.00023"	"6/58"	"6"	"58"	"2719471.03564453"	"HCD"	"MS2"	"19.8626"	"157.2"	"100.000"	"31.4156"	"7779"	"7779"	"7757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"271.4"	""	"224.3"	""	"208.9"	""	"197.0"	"1.5"	"281.6"	"303.7"	""	"728"	"22"	"35.000"	"28.000"	"0.248371284667568"	"18"	"0.000936"	"0.01303"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEMAAQR"	"[R].aVEMAAQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"552.80524"	"1104.60320"	"1104.60329"	"-0.09"	"-0.00005"	"6/58"	"6"	"58"	"2856891.29541016"	"HCD"	"MS2"	"16.7678"	"171.3"	"100.000"	"31.3898"	"7778"	"7778"	"7756"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"278.3"	""	"252.0"	""	"260.5"	""	"228.6"	"2.4"	"291.8"	"307.0"	""	"765"	"25"	"35.000"	"28.000"	"0.110060489363639"	"19"	"0.001211"	"0.01466"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQMAGALR"	"[R].eQMAGALR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"552.80536"	"1104.60344"	"1104.60329"	"0.13"	"0.00007"	"6/68"	"6"	"68"	"2943619.34710693"	"HCD"	"MS2"	"38.72353"	"190.4"	"100.000"	"36.6588"	"9913"	"9913"	"9891"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"246.6"	""	"207.9"	""	"241.5"	""	"306.7"	""	"396.0"	"411.7"	""	"765"	"29"	"35.000"	"28.000"	"0.0517167755421811"	""	"0.006739"	"0.07602"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQMAGALR"	"[R].eQMAGALR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"0.3704"	"0.0000"	"1"	"1"	"1"	"552.80560"	"1104.60393"	"1104.60329"	"0.57"	"0.00032"	"5/68"	"5"	"68"	"3287733.12982178"	"HCD"	"MS2"	"45.02388"	"204.2"	"100.000"	"36.7908"	"9961"	"9961"	"9940"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"266.5"	""	"229.5"	""	"261.8"	""	"316.1"	"2.0"	"434.5"	"429.0"	""	"778"	"27"	"35.000"	"28.000"	"0.0732739495811533"	""	"0.007808"	"0.09585"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INEMVDR"	"[R].iNEMVDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P81799"	"N-acetyl-D-glucosamine kinase OS=Rattus norvegicus OX=10116 GN=Nagk PE=1 SV=4"	"P81799"	"N-acetyl-D-glucosamine kinase OS=Rattus norvegicus OX=10116 GN=Nagk PE=1 SV=4"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"553.29529"	"1105.58330"	"1105.58731"	"-3.63"	"-0.00201"	"6/64"	"6"	"64"	"2065221.87805176"	"HCD"	"MS2"	"0"	"113.5"	"100.000"	"46.5563"	"13924"	"13924"	"13898"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"198.4"	""	"159.6"	""	"150.9"	""	"149.7"	""	"199.5"	"216.7"	""	"726"	"32"	"35.000"	"28.000"	"0.0248832226202316"	"26"	"0.004205"	"0.04604"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHAGYQTI"	"[R].sHAGYQTI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"553.29565"	"1105.58403"	"1105.58394"	"0.08"	"0.00005"	"5/68"	"5"	"68"	"13471948.6443481"	"HCD"	"MS2"	"46.94915"	"394.8"	"100.000"	"30.1388"	"7273"	"7273"	"7257"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"541.6"	""	"503.8"	""	"533.5"	""	"639.7"	""	"777.2"	"753.2"	""	"736"	"22"	"35.000"	"28.000"	"0.258135549818549"	"20"	"0.007627"	"0.09361"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INEMVDR"	"[R].iNEMVDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P81799"	"N-acetyl-D-glucosamine kinase OS=Rattus norvegicus OX=10116 GN=Nagk PE=1 SV=4"	"P81799"	"N-acetyl-D-glucosamine kinase OS=Rattus norvegicus OX=10116 GN=Nagk PE=1 SV=4"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"553.29657"	"1105.58586"	"1105.58731"	"-1.31"	"-0.00072"	"6/64"	"6"	"64"	"2085168.67919922"	"HCD"	"MS2"	"0"	"112.3"	"100.000"	"46.3867"	"13866"	"13866"	"13849"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"202.5"	""	"135.9"	""	"165.5"	""	"144.3"	""	"198.4"	"217.9"	""	"720"	"31"	"35.000"	"28.000"	"0.0269341020184015"	"26"	"0.003449"	"0.03449"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNMEDLR"	"[R].vNMEDLR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.6098"	"0.0000"	"1"	"1"	"1"	"553.29706"	"1105.58684"	"1105.58731"	"-0.43"	"-0.00024"	"5/60"	"5"	"60"	"2227887.07293701"	"HCD"	"MS2"	"31.24468"	"94.2"	"100.000"	"53.0525"	"16571"	"16571"	"16547"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"156.7"	""	"119.7"	""	"124.7"	""	"145.6"	""	"170.3"	"175.4"	""	"719"	"41"	"35.000"	"28.000"	"0.00304578255383544"	""	"0.001211"	"0.01503"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNMEDLR"	"[R].vNMEDLR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.6098"	"0.0000"	"1"	"1"	"1"	"553.29718"	"1105.58708"	"1105.58731"	"-0.20"	"-0.00011"	"5/60"	"5"	"60"	"2504148.99053955"	"HCD"	"MS2"	"24.54178"	"111.1"	"100.000"	"52.7916"	"16476"	"16476"	"16449"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"167.1"	""	"145.6"	""	"153.2"	""	"181.8"	""	"193.6"	"210.9"	""	"741"	"41"	"35.000"	"28.000"	"0.00311019925005437"	""	"0.001211"	"0.01468"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIMNEDR"	"[K].vIMNEDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O08619"	"Coagulation factor XIII A chain OS=Rattus norvegicus OX=10116 GN=F13a1 PE=2 SV=3"	"O08619"	"Coagulation factor XIII A chain OS=Rattus norvegicus OX=10116 GN=F13a1 PE=2 SV=3"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"553.29755"	"1105.58782"	"1105.58731"	"0.46"	"0.00025"	"5/56"	"5"	"56"	"3747839.71386719"	"HCD"	"MS2"	"37.29207"	"214.4"	"100.000"	"36.9323"	"10025"	"10025"	"9999"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"277.5"	""	"233.7"	""	"244.5"	""	"332.1"	""	"475.5"	"478.4"	""	"751"	"25"	"35.000"	"28.000"	"0.114448456860531"	"23"	"0.003967"	"0.0411"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNMEDLR"	"[R].vNMEDLR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"553.29773"	"1105.58818"	"1105.58731"	"0.79"	"0.00044"	"5/60"	"5"	"60"	"3371903.49804688"	"HCD"	"MS2"	"13.62403"	"137.5"	"100.000"	"53.5449"	"16772"	"16772"	"16754"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"191.4"	""	"152.3"	""	"171.9"	""	"233.1"	""	"265.5"	"295.7"	""	"753"	"33"	"35.000"	"28.000"	"0.0171697898855663"	"25"	"0.006685"	"0.0745"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIMNEDR"	"[K].vIMNEDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O08619"	"Coagulation factor XIII A chain OS=Rattus norvegicus OX=10116 GN=F13a1 PE=2 SV=3"	"O08619"	"Coagulation factor XIII A chain OS=Rattus norvegicus OX=10116 GN=F13a1 PE=2 SV=3"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"553.29785"	"1105.58843"	"1105.58731"	"1.01"	"0.00056"	"6/56"	"6"	"56"	"4526961.0456543"	"HCD"	"MS2"	"49.8845"	"251.3"	"100.000"	"37.1081"	"10091"	"10091"	"10064"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"305.8"	""	"272.8"	""	"271.3"	""	"369.3"	""	"580.4"	"602.2"	""	"755"	"23"	"35.000"	"28.000"	"0.200870867873215"	"21"	"0.005001"	"0.05632"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSELLDR"	"[K].sGSELLDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"553.30573"	"1105.60417"	"1105.60507"	"-0.81"	"-0.00045"	"6/68"	"6"	"68"	"2914315.33282471"	"HCD"	"MS2"	"47.63065"	"184.0"	"100.000"	"38.6662"	"10726"	"10726"	"10704"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"224.6"	""	"184.9"	""	"208.1"	""	"323.3"	"1.3"	"420.3"	"387.3"	""	"761"	"17"	"35.000"	"28.000"	"0.769758797487081"	"17"	"0.000936"	"0.01133"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSELLDR"	"[K].sGSELLDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"553.30597"	"1105.60466"	"1105.60507"	"-0.37"	"-0.00020"	"7/68"	"7"	"68"	"2935128.04199219"	"HCD"	"MS2"	"53.02133"	"188.1"	"100.000"	"38.8302"	"10784"	"10784"	"10757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"225.7"	""	"178.1"	""	"213.9"	""	"338.7"	""	"422.4"	"412.9"	""	"760"	"19"	"35.000"	"28.000"	"0.453715479696424"	"20"	"0.003449"	"0.03396"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEINPR"	"[K].tFEINPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"553.31378"	"1105.62029"	"1105.62032"	"-0.03"	"-0.00002"	"5/56"	"5"	"56"	"4994819.69421387"	"HCD"	"MS2"	"14.76937"	"235.6"	"100.000"	"52.5787"	"16378"	"16378"	"16361"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"350.1"	""	"314.2"	""	"342.8"	""	"382.5"	""	"423.5"	"424.7"	""	"780"	"32"	"35.000"	"28.000"	"0.0272938378440886"	"22"	"0.005369"	"0.06134"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEINPR"	"[K].tFEINPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"553.31396"	"1105.62065"	"1105.62032"	"0.30"	"0.00016"	"5/56"	"5"	"56"	"5377028.09796143"	"HCD"	"MS2"	"12.47453"	"255.6"	"100.000"	"52.2855"	"16269"	"16269"	"16251"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"375.8"	""	"326.0"	""	"372.4"	""	"416.4"	""	"452.5"	"481.2"	""	"767"	"32"	"35.000"	"28.000"	"0.026962823467545"	"18"	"0.006685"	"0.07456"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGADAK"	"[K].aDGADAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"553.31671"	"1105.62615"	"1105.62536"	"0.71"	"0.00039"	"6/54"	"6"	"54"	"4931876.61553955"	"HCD"	"MS2"	"40.87236"	"401.5"	"100.000"	"24.1885"	"4851"	"4851"	"4821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"455.1"	""	"400.9"	""	"454.2"	""	"802.1"	""	"849.5"	"865.5"	""	"770"	"25"	"35.000"	"28.000"	"0.12063150038615"	"22"	"0.009478"	"0.124"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSVETALR"	"[R].tSVETALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"553.32257"	"1105.63786"	"1105.64145"	"-3.25"	"-0.00179"	"6/64"	"6"	"64"	"22922964.4335938"	"HCD"	"MS2"	"1.972253"	"554.7"	"59.863"	"39.7606"	"11173"	"11173"	"11156"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"849.9"	""	"782.9"	""	"793.6"	""	"884.7"	""	"937.7"	"1009.8"	""	"654"	"36"	"35.000"	"28.000"	"0.00898561388064484"	""	"0.0008629"	"0.01067"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSVETALR"	"[R].tSVETALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"553.32349"	"1105.63970"	"1105.64145"	"-1.59"	"-0.00088"	"6/64"	"6"	"64"	"22552976.3460693"	"HCD"	"MS2"	"2.537472"	"406.2"	"47.885"	"39.9565"	"11243"	"11243"	"11225"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"614.7"	""	"581.2"	""	"601.5"	""	"649.7"	""	"698.3"	"702.8"	""	"685"	"41"	"35.000"	"28.000"	"0.00294212131115598"	"22"	"0.0003538"	"0.007042"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESVGAGK"	"[K].eSVGAGk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"553.33398"	"1105.66069"	"1105.66174"	"-0.95"	"-0.00053"	"6/50"	"6"	"50"	"14780816.5749512"	"HCD"	"MS2"	"0"	"927.5"	"100.000"	"28.2124"	"6492"	"6492"	"6482"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1596.7"	""	"1452.8"	""	"1363.5"	""	"1375.0"	""	"1451.3"	"1533.3"	""	"477"	"32"	"33.000"	"26.000"	"0.0146382238231804"	""	"0.003967"	"0.04094"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESVGAGK"	"[K].eSVGAGk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"553.33466"	"1105.66203"	"1105.66174"	"0.26"	"0.00015"	"6/50"	"6"	"50"	"14135474.8175049"	"HCD"	"MS2"	"0"	"937.2"	"100.000"	"28.2906"	"6509"	"6509"	"6491"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1621.4"	""	"1405.9"	""	"1365.0"	""	"1411.9"	""	"1536.3"	"1523.8"	""	"474"	"32"	"33.000"	"26.000"	"0.0146133015441171"	""	"0.003717"	"0.03821"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lMDDLDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"553.78857"	"1106.56987"	"1106.57133"	"-1.31"	"-0.00073"	"6/54"	"6"	"54"	"5824174.0758667"	"HCD"	"MS2"	"0"	"287.0"	"100.000"	"62.1296"	"20244"	"20244"	"20232"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"333.8"	""	"316.1"	""	"378.0"	""	"475.9"	""	"600.5"	"626.5"	""	"585"	"46"	"34.000"	"27.000"	"0.000668537649987313"	""	"0.001546"	"0.01915"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lMDDLDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"553.78870"	"1106.57012"	"1106.57133"	"-1.09"	"-0.00060"	"6/54"	"6"	"54"	"749763.403564453"	"HCD"	"MS2"	"0"	"43.2"	"100.000"	"62.4738"	"20383"	"20383"	"20359"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.8"	""	"51.3"	""	"58.5"	""	"69.5"	""	"81.8"	"91.0"	""	"587"	"28"	"34.000"	"27.000"	"0.0506533421299125"	"25"	"0.004606"	"0.04963"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lMDDLDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"553.78882"	"1106.57036"	"1106.57133"	"-0.87"	"-0.00048"	"6/54"	"6"	"54"	"6558950.72314453"	"HCD"	"MS2"	"0"	"314.2"	"100.000"	"62.2487"	"20276"	"20276"	"20270"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"374.2"	""	"330.9"	""	"393.5"	""	"521.2"	""	"690.7"	"677.5"	""	"587"	"46"	"34.000"	"27.000"	"0.000663144398559857"	""	"0.000936"	"0.01263"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lMDDLDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.4750"	"0.0000"	"1"	"1"	"1"	"553.78882"	"1106.57036"	"1106.57133"	"-0.87"	"-0.00048"	"6/54"	"6"	"54"	"5556206.38330078"	"HCD"	"MS2"	"18.46376"	"251.2"	"100.000"	"61.5703"	"20020"	"20020"	"20001"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"279.5"	""	"273.0"	""	"294.2"	""	"407.8"	""	"552.2"	"585.9"	""	"587"	"40"	"34.000"	"27.000"	"0.00287480310717453"	""	"0.001886"	"0.02198"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lMDDLDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.5814"	"0.0000"	"1"	"1"	"1"	"553.78882"	"1106.57036"	"1106.57133"	"-0.87"	"-0.00048"	"6/54"	"6"	"54"	"34195608.4519043"	"HCD"	"MS2"	"0"	"748.5"	"44.637"	"61.9671"	"20166"	"20166"	"20154"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"859.6"	""	"820.5"	""	"936.2"	""	"1260.5"	""	"1578.3"	"1667.5"	""	"587"	"43"	"34.000"	"27.000"	"0.00160549185109381"	""	"0.002937"	"0.02777"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lMDDLDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.5682"	"0.0000"	"1"	"1"	"1"	"553.78894"	"1106.57060"	"1106.57133"	"-0.65"	"-0.00036"	"6/54"	"6"	"54"	"33392661.1730957"	"HCD"	"MS2"	"0"	"722.6"	"46.997"	"61.8547"	"20135"	"20135"	"20128"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"834.1"	""	"761.0"	""	"948.8"	""	"1242.3"	""	"1504.5"	"1585.4"	""	"586"	"44"	"34.000"	"27.000"	"0.00104922256071072"	""	"0.001465"	"0.01825"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lMDDLDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"553.78937"	"1106.57146"	"1106.57133"	"0.12"	"0.00007"	"6/54"	"6"	"54"	"865055.316101074"	"HCD"	"MS2"	"6.605173"	"51.2"	"100.000"	"62.5560"	"20400"	"20400"	"20381"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.5"	""	"59.8"	""	"70.4"	""	"84.0"	""	"98.3"	"108.5"	""	"587"	"32"	"34.000"	"27.000"	"0.020026640673058"	""	"0.001374"	"0.01711"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lMDDLDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.4194"	"0.0000"	"1"	"1"	"1"	"553.78943"	"1106.57158"	"1106.57133"	"0.23"	"0.00013"	"6/54"	"6"	"54"	"3849630.15539551"	"HCD"	"MS2"	"24.00493"	"174.3"	"100.000"	"61.6987"	"20057"	"20057"	"20033"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"195.0"	""	"184.1"	""	"196.5"	""	"260.5"	""	"404.0"	"423.5"	""	"587"	"31"	"34.000"	"27.000"	"0.0222642518271066"	""	"0.0023"	"0.0234"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVDVGGQR"	"[KR].mVDVGGQR.[S]"	"N-Term(TMT6plex); M1(Oxidation)"	"3"	"5"	"Q6Q7Y5; P82471; Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1;Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2;Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"Q6Q7Y5; P19627; P82471; Q9JID2; Q63210"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1; Guanine nucleotide-binding protein G(z) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaz PE=2 SV=3; Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2; Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1; Guanine nucleotide-binding protein subunit alpha-12 OS=Rattus norvegicus OX=10116 GN=Gna12 PE=1 SV=3"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"553.79468"	"1106.58208"	"1106.58256"	"-0.43"	"-0.00024"	"6/58"	"6"	"58"	"2879351.48986816"	"HCD"	"MS2"	"21.20733"	"145.9"	"100.000"	"26.6639"	"5848"	"5848"	"5824"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"192.9"	""	"177.3"	""	"175.5"	""	"291.5"	"0.9"	"274.4"	"271.0"	""	"611"	"21"	"34.000"	"27.000"	"0.261825061717878"	"23"	"0.004867"	"0.05171"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTEMNGR"	"[K].aVTEMNGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"553.79468"	"1106.58208"	"1106.58256"	"-0.43"	"-0.00024"	"6/62"	"6"	"62"	"4631211.91278076"	"HCD"	"MS2"	"13.04433"	"296.1"	"100.000"	"27.5855"	"6237"	"6237"	"6216"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"449.0"	""	"366.0"	""	"382.9"	""	"422.7"	"23.1"	"568.6"	"595.7"	""	"611"	"38"	"34.000"	"27.000"	"0.00507003800222175"	"22"	"0.0002479"	"0.005264"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLFNIR"	"[R].SEIDLFNIR.[K]"	""	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"553.79498"	"1106.58269"	"1106.58405"	"-1.23"	"-0.00068"	"7/74"	"7"	"74"	"266709.47442627"	"HCD"	"MS2"	"18.06853"	"7.8"	"100.000"	"88.5700"	"30867"	"30867"	"30852"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.2"	""	"10.4"	""	"11.8"	""	"13.1"	""	"13.7"	"14.0"	"NoQuanLabels"	"626"	"33"	"34.000"	"27.000"	"0.0159788064992302"	"25"	"0.002467"	"0.02493"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLFNIR"	"[R].SEIDLFNIR.[K]"	""	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"553.79523"	"1106.58318"	"1106.58405"	"-0.79"	"-0.00044"	"6/74"	"6"	"74"	"281345.776489258"	"HCD"	"MS2"	"6.824464"	"6.3"	"100.000"	"88.5604"	"30859"	"30859"	"30850"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.9"	""	"8.6"	""	"9.0"	""	"13.0"	""	"10.5"	"12.0"	"NoQuanLabels"	"630"	"32"	"34.000"	"27.000"	"0.0197383367371785"	"24"	"0.003449"	"0.03541"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLFNIR"	"[R].SEIDLFNIR.[K]"	""	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"553.79523"	"1106.58318"	"1106.58405"	"-0.79"	"-0.00044"	"7/74"	"7"	"74"	"639978.897949219"	"HCD"	"MS2"	"9.027812"	"9.3"	"100.000"	"88.8463"	"30971"	"30971"	"30963"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.0"	""	"9.1"	""	"14.2"	""	"15.7"	""	"22.7"	"15.9"	"NoQuanLabels"	"630"	"28"	"34.000"	"27.000"	"0.0473489719318357"	"24"	"0.0023"	"0.02306"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLFNIR"	"[R].SEIDLFNIR.[K]"	""	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"553.79553"	"1106.58379"	"1106.58405"	"-0.24"	"-0.00013"	"7/74"	"7"	"74"	"655081.05847168"	"HCD"	"MS2"	"10.84013"	"10.8"	"100.000"	"88.8463"	"30968"	"30968"	"30956"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.4"	""	"13.4"	""	"14.9"	""	"13.3"	""	"28.9"	"22.6"	"NoQuanLabels"	"628"	"29"	"34.000"	"27.000"	"0.0387194917633877"	"25"	"0.00263"	"0.02565"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQTTATSR"	"[R].lQTTATSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"553.82159"	"1106.63591"	"1106.63670"	"-0.71"	"-0.00040"	"5/76"	"5"	"76"	"1506129.84997559"	"HCD"	"MS2"	"14.44159"	"109.0"	"100.000"	"26.1700"	"5664"	"5664"	"5644"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"159.3"	""	"129.5"	""	"146.9"	""	"182.3"	""	"199.4"	"215.8"	""	"648"	"18"	"35.000"	"28.000"	"0.551499356719964"	"18"	"0.0008629"	"0.009999"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQTTATSR"	"[R].lQTTATSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"553.82172"	"1106.63616"	"1106.63670"	"-0.49"	"-0.00027"	"6/76"	"6"	"76"	"9248667.40008545"	"HCD"	"MS2"	"13.15582"	"395.8"	"100.000"	"25.8535"	"5536"	"5536"	"5512"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"633.6"	""	"456.0"	""	"574.1"	""	"634.8"	""	"634.9"	"819.4"	""	"641"	"32"	"35.000"	"28.000"	"0.0222242970828311"	"25"	"0.0006732"	"0.00824"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQTTATSR"	"[R].lQTTATSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"553.82178"	"1106.63628"	"1106.63670"	"-0.38"	"-0.00021"	"7/76"	"7"	"76"	"1841513.00439453"	"HCD"	"MS2"	"0"	"108.4"	"100.000"	"26.2047"	"5662"	"5662"	"5647"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"165.3"	""	"114.7"	""	"144.2"	""	"192.5"	""	"201.2"	"210.4"	""	"641"	"24"	"35.000"	"28.000"	"0.137666424778146"	"21"	"0.0006732"	"0.009114"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQTTATSR"	"[R].lQTTATSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"553.82190"	"1106.63652"	"1106.63670"	"-0.16"	"-0.00009"	"6/76"	"6"	"76"	"7533155.33666992"	"HCD"	"MS2"	"11.6584"	"309.7"	"100.000"	"25.9273"	"5551"	"5551"	"5529"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"504.5"	""	"365.0"	""	"432.0"	""	"491.1"	"0.6"	"525.1"	"614.0"	""	"641"	"32"	"35.000"	"28.000"	"0.021668459361313"	"26"	"0.0006732"	"0.008291"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEMDLSGR"	"[K].aEMDLSGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O08619"	"Coagulation factor XIII A chain OS=Rattus norvegicus OX=10116 GN=F13a1 PE=2 SV=3"	"O08619"	"Coagulation factor XIII A chain OS=Rattus norvegicus OX=10116 GN=F13a1 PE=2 SV=3"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"554.28583"	"1107.56438"	"1107.56657"	"-1.98"	"-0.00110"	"6/64"	"6"	"64"	"2990361.9029541"	"HCD"	"MS2"	"47.09666"	"156.6"	"100.000"	"40.5517"	"11495"	"11495"	"11475"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"259.5"	""	"198.5"	""	"186.4"	""	"191.2"	""	"335.7"	"319.1"	""	"524"	"33"	"34.000"	"27.000"	"0.011948167197924"	"25"	"0"	"0.003737"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMDVVSGR"	"[R].dMDVVSGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVH8"	"Fibulin-5 OS=Rattus norvegicus OX=10116 GN=Fbln5 PE=2 SV=1"	"Q9WVH8"	"Fibulin-5 OS=Rattus norvegicus OX=10116 GN=Fbln5 PE=2 SV=1"	"0"	"2"	"2"	"0.6889"	"0.0000"	"1"	"1"	"1"	"554.28668"	"1107.56609"	"1107.56657"	"-0.44"	"-0.00024"	"6/66"	"6"	"66"	"4245896.3170166"	"HCD"	"MS2"	"11.58041"	"215.4"	"100.000"	"40.1911"	"11339"	"11339"	"11320"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"449.7"	""	"309.0"	""	"338.8"	""	"224.9"	""	"355.0"	"361.1"	""	"509"	"45"	"34.000"	"27.000"	"0.000777477423313348"	""	"0"	"0.001826"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMDVVSGR"	"[R].dMDVVSGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVH8"	"Fibulin-5 OS=Rattus norvegicus OX=10116 GN=Fbln5 PE=2 SV=1"	"Q9WVH8"	"Fibulin-5 OS=Rattus norvegicus OX=10116 GN=Fbln5 PE=2 SV=1"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"554.28705"	"1107.56682"	"1107.56657"	"0.22"	"0.00012"	"6/66"	"6"	"66"	"4791589.72717285"	"HCD"	"MS2"	"8.30019"	"221.4"	"100.000"	"39.9951"	"11268"	"11268"	"11252"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"446.4"	""	"328.8"	""	"357.1"	""	"229.5"	""	"358.7"	"374.8"	""	"529"	"41"	"34.000"	"27.000"	"0.00219495528007564"	""	"0"	"0.002306"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTEMNGR"	"[K].aVTEMnGR.[I]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"554.28741"	"1107.56755"	"1107.56657"	"0.88"	"0.00049"	"5/62"	"5"	"62"	"1967619.57855225"	"HCD"	"MS2"	"33.83833"	"130.3"	"100.000"	"30.8635"	"7566"	"7566"	"7547"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"162.7"	""	"143.6"	""	"152.3"	""	"240.6"	""	"273.7"	"266.1"	""	"532"	"34"	"34.000"	"27.000"	"0.0103486008568479"	"21"	"0.0003538"	"0.007194"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTEMNGR"	"[K].aVTEMnGR.[I]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"554.28857"	"1107.56987"	"1107.56657"	"2.98"	"0.00165"	"5/62"	"5"	"62"	"2096425.81134033"	"HCD"	"MS2"	"34.38954"	"138.5"	"100.000"	"30.8753"	"7559"	"7559"	"7544"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"192.9"	""	"146.7"	""	"162.6"	""	"241.7"	"0.9"	"290.3"	"280.4"	""	"594"	"31"	"34.000"	"27.000"	"0.0212205408844427"	"20"	"0.0001301"	"0.004033"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDFGEAAR"	"[K].iDFGEAAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P08753"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3"	"P08753"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"554.30219"	"1107.59709"	"1107.59959"	"-2.25"	"-0.00125"	"6/62"	"6"	"62"	"1618677.5032959"	"HCD"	"MS2"	"16.19182"	"80.1"	"100.000"	"58.3486"	"18725"	"18725"	"18703"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"97.7"	""	"103.7"	""	"95.6"	""	"147.4"	""	"159.2"	"157.3"	""	"653"	"29"	"35.000"	"28.000"	"0.0441451691882931"	"24"	"0.0002479"	"0.005468"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFVNDDR"	"[R].iFVNDDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"554.30280"	"1107.59831"	"1107.59959"	"-1.15"	"-0.00064"	"5/56"	"5"	"56"	"1567737.21887207"	"HCD"	"MS2"	"16.56774"	"89.1"	"100.000"	"50.9329"	"15706"	"15706"	"15684"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"109.0"	""	"90.8"	""	"85.3"	""	"174.4"	""	"196.3"	"192.3"	""	"648"	"40"	"35.000"	"28.000"	"0.00321769599688383"	""	"0.000936"	"0.01225"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDFGEAAR"	"[K].iDFGEAAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P08753"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3"	"P08753"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"554.30286"	"1107.59844"	"1107.59959"	"-1.04"	"-0.00058"	"11/62"	"11"	"62"	"3436847.12011719"	"HCD"	"MS2"	"2.409405"	"152.5"	"100.000"	"58.2268"	"18690"	"18690"	"18671"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"166.6"	""	"185.0"	""	"168.9"	""	"271.5"	""	"335.2"	"325.5"	""	"648"	"30"	"35.000"	"28.000"	"0.0337710847123431"	"25"	"0.0003538"	"0.00732"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFVNDDR"	"[R].iFVNDDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"0"	"2"	"2"	"0.2903"	"0.0000"	"1"	"1"	"1"	"554.30322"	"1107.59917"	"1107.59959"	"-0.38"	"-0.00021"	"7/56"	"7"	"56"	"1385648.77990723"	"HCD"	"MS2"	"49.60926"	"83.7"	"100.000"	"50.5638"	"15567"	"15567"	"15543"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"99.7"	""	"84.1"	""	"93.9"	""	"162.1"	""	"177.6"	"179.6"	""	"659"	"31"	"35.000"	"28.000"	"0.0288971770566828"	""	"0.001211"	"0.01422"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDFGEAAR"	"[K].iDFGEAAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P08753"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3"	"P08753"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"554.30347"	"1107.59966"	"1107.59959"	"0.06"	"0.00003"	"11/62"	"11"	"62"	"2861338.09448242"	"HCD"	"MS2"	"1.785828"	"133.7"	"100.000"	"58.5377"	"18817"	"18817"	"18799"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"142.5"	""	"136.7"	""	"173.5"	""	"227.7"	""	"291.9"	"299.6"	""	"680"	"34"	"35.000"	"28.000"	"0.0150480046603293"	"26"	"0.0001301"	"0.003984"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDFGEAAR"	"[K].iDFGEAAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P08753"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3"	"P08753"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"554.30347"	"1107.59966"	"1107.59959"	"0.06"	"0.00003"	"11/62"	"11"	"62"	"4804752.77410889"	"HCD"	"MS2"	"1.813428"	"216.8"	"100.000"	"58.6386"	"18843"	"18843"	"18824"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"220.3"	""	"271.0"	""	"254.8"	""	"377.2"	""	"461.8"	"477.2"	""	"680"	"34"	"35.000"	"28.000"	"0.0146042385100062"	"24"	"0.0002479"	"0.005698"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSISDTVK"	"[M].sSISDTVk.[R]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"554.30817"	"1107.60906"	"1107.60949"	"-0.39"	"-0.00021"	"5/66"	"5"	"66"	"1447598.00061035"	"HCD"	"MS2"	"7.387355"	"70.7"	"100.000"	"51.4967"	"15947"	"15947"	"15925"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"101.2"	""	"84.3"	""	"91.4"	""	"104.1"	""	"121.0"	"169.4"	""	"686"	"33"	"35.000"	"28.000"	"0.0156781249037902"	"26"	"0.004942"	"0.05332"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSISDTVK"	"[M].sSISDTVk.[R]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7292"	"0.0000"	"1"	"1"	"1"	"554.30847"	"1107.60967"	"1107.60949"	"0.16"	"0.00009"	"6/66"	"6"	"66"	"1438736.35076904"	"HCD"	"MS2"	"4.130995"	"71.9"	"100.000"	"51.8057"	"16062"	"16062"	"16043"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"114.8"	""	"84.2"	""	"83.1"	""	"101.7"	""	"121.6"	"177.5"	""	"685"	"48"	"35.000"	"28.000"	"0.00051720245280122"	""	"0.0008629"	"0.01011"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHPVQER"	"[RK].iHPVQER.[IL]"	"N-Term(TMT6plex)"	"3"	"2"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80; Q5QE79"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1; Aldehyde oxidase 4 OS=Rattus norvegicus OX=10116 GN=Aox4 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"554.32697"	"1107.64665"	"1107.64721"	"-0.50"	"-0.00028"	"6/52"	"6"	"52"	"5995365.03094482"	"HCD"	"MS2"	"3.180124"	"244.9"	"100.000"	"22.5664"	"4211"	"4211"	"4186"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"346.7"	""	"306.9"	""	"310.7"	""	"382.8"	""	"488.8"	"492.7"	""	"513"	"21"	"34.000"	"27.000"	"0.210905239711424"	"14"	"0.007413"	"0.08844"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHPVQER"	"[RK].lHPVQER.[IL]"	"N-Term(TMT6plex)"	"3"	"3"	"Q9Z0U5; P22985"	"Aldehyde oxidase 1 OS=Rattus norvegicus OX=10116 GN=Aox1 PE=1 SV=1;Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"Q9Z0U5; Q5QE78; P22985"	"Aldehyde oxidase 1 OS=Rattus norvegicus OX=10116 GN=Aox1 PE=1 SV=1; Aldehyde oxidase 2 OS=Rattus norvegicus OX=10116 GN=Aox2 PE=2 SV=1; Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"554.32697"	"1107.64665"	"1107.64721"	"-0.50"	"-0.00028"	"6/52"	"6"	"52"	"5995365.03094482"	"HCD"	"MS2"	"3.180124"	"244.9"	"100.000"	"22.5664"	"4211"	"4211"	"4186"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"346.7"	""	"306.9"	""	"310.7"	""	"382.8"	""	"488.8"	"492.7"	""	"513"	"21"	"34.000"	"27.000"	"0.210905239711424"	"14"	"0.007413"	"0.08844"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHPVQER"	"[RK].iHPVQER.[IL]"	"N-Term(TMT6plex)"	"3"	"2"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80; Q5QE79"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1; Aldehyde oxidase 4 OS=Rattus norvegicus OX=10116 GN=Aox4 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"554.32733"	"1107.64739"	"1107.64721"	"0.16"	"0.00009"	"5/52"	"5"	"52"	"2709300.56555176"	"HCD"	"MS2"	"0"	"134.1"	"100.000"	"22.6471"	"4227"	"4227"	"4206"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"190.0"	""	"158.9"	""	"170.3"	""	"223.9"	""	"264.6"	"267.5"	""	"461"	"17"	"33.000"	"26.000"	"0.430200518737391"	"15"	"0.007627"	"0.09214"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHPVQER"	"[RK].lHPVQER.[IL]"	"N-Term(TMT6plex)"	"3"	"3"	"Q9Z0U5; P22985"	"Aldehyde oxidase 1 OS=Rattus norvegicus OX=10116 GN=Aox1 PE=1 SV=1;Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"Q9Z0U5; Q5QE78; P22985"	"Aldehyde oxidase 1 OS=Rattus norvegicus OX=10116 GN=Aox1 PE=1 SV=1; Aldehyde oxidase 2 OS=Rattus norvegicus OX=10116 GN=Aox2 PE=2 SV=1; Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"554.32733"	"1107.64739"	"1107.64721"	"0.16"	"0.00009"	"5/52"	"5"	"52"	"2709300.56555176"	"HCD"	"MS2"	"0"	"134.1"	"100.000"	"22.6471"	"4227"	"4227"	"4206"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"190.0"	""	"158.9"	""	"170.3"	""	"223.9"	""	"264.6"	"267.5"	""	"461"	"17"	"33.000"	"26.000"	"0.430200518737391"	"15"	"0.007627"	"0.09214"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEYLNNR"	"[R].aEYLNNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"554.80023"	"1108.59319"	"1108.59484"	"-1.49"	"-0.00083"	"5/52"	"5"	"52"	"5042279.97436523"	"HCD"	"MS2"	"28.47058"	"303.9"	"100.000"	"32.9795"	"8424"	"8424"	"8395"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"541.8"	""	"439.9"	""	"379.3"	""	"469.2"	"1.3"	"533.6"	"510.0"	""	"612"	"24"	"34.000"	"27.000"	"0.125233761877383"	"20"	"0.007339"	"0.08426"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEYLNNR"	"[R].aEYLNNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"554.80084"	"1108.59441"	"1108.59484"	"-0.39"	"-0.00022"	"5/52"	"5"	"52"	"6127510.39794922"	"HCD"	"MS2"	"19.16409"	"358.7"	"100.000"	"33.0187"	"8433"	"8433"	"8413"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"603.8"	""	"523.6"	""	"457.5"	""	"560.9"	""	"607.8"	"641.8"	""	"610"	"26"	"34.000"	"27.000"	"0.0703557892559621"	"21"	"0.005183"	"0.05884"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHENNPR"	"[K].lHENNPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"554.80536"	"1108.60344"	"1108.60607"	"-2.37"	"-0.00132"	"5/54"	"5"	"54"	"8499377.03961182"	"HCD"	"MS2"	"5.742633"	"358.4"	"100.000"	"19.4068"	"2951"	"2951"	"2931"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"338.7"	""	"315.4"	""	"278.3"	""	"1031.7"	""	"698.3"	"747.0"	""	"684"	"27"	"35.000"	"28.000"	"0.0753400850364281"	"28"	"0.008522"	"0.1062"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHENNPR"	"[K].lHENNPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"3"	"3"	"0.6765"	"0.0000"	"1"	"1"	"1"	"370.20624"	"1108.60416"	"1108.60607"	"-1.72"	"-0.00064"	"9/54"	"9"	"54"	"28492724.6292114"	"HCD"	"MS2"	"17.3024"	"395.0"	"90.558"	"19.4048"	"2950"	"2950"	"2931"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"398.4"	""	"380.4"	""	"369.4"	""	"1017.8"	"4.7"	"793.6"	"788.9"	""	"666"	"34"	"35.000"	"28.000"	"0.0145694861017698"	"26"	"0.001211"	"0.01408"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHENNPR"	"[K].lHENNPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"3"	"3"	"0.5455"	"0.0000"	"1"	"1"	"1"	"370.20654"	"1108.60508"	"1108.60607"	"-0.90"	"-0.00033"	"9/54"	"9"	"54"	"27766349.7974243"	"HCD"	"MS2"	"16.1486"	"405.7"	"97.477"	"19.4672"	"2969"	"2969"	"2952"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"406.6"	""	"377.6"	""	"369.8"	""	"1073.4"	""	"788.6"	"841.2"	""	"666"	"33"	"35.000"	"28.000"	"0.0151511024029966"	""	"0.0006732"	"0.00919"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHENNPR"	"[K].lHENNPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"554.80627"	"1108.60527"	"1108.60607"	"-0.72"	"-0.00040"	"5/54"	"5"	"54"	"4302066.23291016"	"HCD"	"MS2"	"21.47635"	"184.8"	"100.000"	"19.4420"	"2959"	"2959"	"2943"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"187.5"	""	"168.3"	""	"151.9"	""	"515.8"	""	"356.2"	"380.2"	""	"670"	"27"	"35.000"	"28.000"	"0.0741386727717888"	"19"	"0.005617"	"0.0634"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHENNPR"	"[K].lHENNPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"554.80719"	"1108.60710"	"1108.60607"	"0.93"	"0.00052"	"5/54"	"5"	"54"	"187335.898925781"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"19.6957"	"3068"	"3068"	"3051"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.6"	""	"14.4"	""	"11.2"	""	"31.2"	""	"32.7"	"34.0"	""	"648"	"24"	"35.000"	"28.000"	"0.131082588909971"	"22"	"0.009417"	"0.1225"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVIEYAR"	"[K].eVIEYAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"554.81378"	"1108.62029"	"1108.61999"	"0.27"	"0.00015"	"5/54"	"5"	"54"	"2239271.98590088"	"HCD"	"MS2"	"10.98484"	"117.0"	"100.000"	"45.0932"	"13338"	"13338"	"13319"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"182.4"	""	"169.1"	""	"182.6"	""	"180.5"	""	"201.2"	"191.8"	""	"637"	"35"	"35.000"	"28.000"	"0.00908049318199994"	""	"0.001546"	"0.0192"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVIEYAR"	"[K].eVIEYAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"554.81396"	"1108.62065"	"1108.61999"	"0.60"	"0.00033"	"5/54"	"5"	"54"	"2121071.15234375"	"HCD"	"MS2"	"12.69674"	"115.4"	"100.000"	"45.2223"	"13380"	"13380"	"13355"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"177.5"	""	"179.3"	""	"157.5"	""	"174.1"	""	"204.5"	"199.2"	""	"612"	"28"	"34.000"	"27.000"	"0.0530544023312766"	""	"0.003922"	"0.04027"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EVATCVGR"	"[K].eVATcVGR.[N]"	"N-Term(TMT6plex); C5(Methylthio)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"555.29327"	"1109.57927"	"1109.56447"	"13.34"	"0.00740"	"7/62"	"7"	"62"	"3630727.63049316"	"HCD"	"MS2"	"14.52421"	"191.9"	"100.000"	"45.7053"	"13588"	"13588"	"13566"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"264.8"	""	"252.3"	""	"272.6"	""	"292.3"	"0.4"	"363.5"	"373.4"	""	"621"	"12"	"34.000"	"27.000"	"1.78674100543187"	"19"	"0.005921"	"0.06758"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGSVDFK"	"[R].LDGSVDFk.[K]"	"K8(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"555.30518"	"1109.60307"	"1109.60401"	"-0.84"	"-0.00047"	"7/64"	"7"	"64"	"1161255.81219482"	"HCD"	"MS2"	"36.41424"	"65.2"	"100.000"	"51.3536"	"15889"	"15889"	"15861"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.1"	""	"91.1"	""	"79.2"	""	"109.7"	""	"136.7"	"128.7"	""	"653"	"50"	"35.000"	"28.000"	"0.000325749070838064"	"27"	"0.001134"	"0.01392"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDNLTYR"	"[K].vDNLTYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"555.31067"	"1109.61406"	"1109.61524"	"-1.06"	"-0.00059"	"5/62"	"5"	"62"	"5712269.51934814"	"HCD"	"MS2"	"44.62779"	"282.5"	"100.000"	"45.9634"	"13681"	"13681"	"13661"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"403.2"	""	"359.0"	""	"374.5"	""	"476.8"	""	"537.6"	"532.6"	""	"527"	"24"	"34.000"	"27.000"	"0.109088914314999"	"19"	"0.005369"	"0.06148"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAGFTLR"	"[R].tDAGFTLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"555.31079"	"1109.61431"	"1109.61524"	"-0.84"	"-0.00047"	"5/66"	"5"	"66"	"9361976.10577393"	"HCD"	"MS2"	"0"	"422.9"	"100.000"	"53.1953"	"16629"	"16629"	"16611"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"642.2"	""	"624.6"	""	"584.2"	""	"698.4"	""	"731.3"	"724.8"	""	"529"	"36"	"34.000"	"27.000"	"0.00650767231297046"	""	"0.0001301"	"0.004977"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDNLTYR"	"[K].vDNLTYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"555.31085"	"1109.61443"	"1109.61524"	"-0.73"	"-0.00041"	"6/62"	"6"	"62"	"2059146.82232666"	"HCD"	"MS2"	"22.41976"	"131.3"	"100.000"	"46.2808"	"13811"	"13811"	"13789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"202.9"	""	"145.9"	""	"172.4"	""	"214.6"	"8.4"	"246.7"	"253.6"	""	"528"	"14"	"34.000"	"27.000"	"1.09547867255472"	"13"	"0.008437"	"0.1015"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAGFTLR"	"[R].tDAGFTLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"555.31091"	"1109.61455"	"1109.61524"	"-0.62"	"-0.00034"	"5/66"	"5"	"66"	"10282907.3700562"	"HCD"	"MS2"	"1.578458"	"437.4"	"100.000"	"52.9299"	"16532"	"16532"	"16513"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"653.1"	""	"636.3"	""	"586.1"	""	"710.9"	""	"763.1"	"793.7"	""	"525"	"36"	"34.000"	"27.000"	"0.0064436109036732"	""	"0.0001301"	"0.004632"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAGFTLR"	"[R].tDAGFTLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5128"	"0.0000"	"1"	"1"	"1"	"555.31097"	"1109.61467"	"1109.61524"	"-0.51"	"-0.00028"	"5/66"	"5"	"66"	"13934496.9829712"	"HCD"	"MS2"	"0.8072109"	"448.8"	"72.216"	"53.5058"	"16756"	"16756"	"16738"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"629.6"	""	"598.7"	""	"625.0"	""	"712.2"	""	"823.9"	"869.5"	""	"525"	"39"	"34.000"	"27.000"	"0.0031705113171553"	""	"0.0003538"	"0.006857"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDNLTYR"	"[K].vDNLTYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"555.31104"	"1109.61479"	"1109.61524"	"-0.40"	"-0.00022"	"5/62"	"5"	"62"	"5922728.35809326"	"HCD"	"MS2"	"38.94264"	"289.6"	"100.000"	"45.8088"	"13630"	"13630"	"13611"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"421.7"	""	"367.0"	""	"350.9"	""	"488.7"	""	"562.3"	"560.2"	""	"525"	"27"	"34.000"	"27.000"	"0.0532266713874337"	"19"	"0.004942"	"0.05474"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAYSLDGR"	"[K].vAYSLDGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P70490"	"Lactadherin OS=Rattus norvegicus OX=10116 GN=Mfge8 PE=2 SV=1"	"P70490"	"Lactadherin OS=Rattus norvegicus OX=10116 GN=Mfge8 PE=2 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"555.31110"	"1109.61492"	"1109.61524"	"-0.29"	"-0.00016"	"6/60"	"6"	"60"	"2275049.28100586"	"HCD"	"MS2"	"26.98549"	"136.2"	"100.000"	"49.7750"	"15234"	"15234"	"15217"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"185.5"	""	"174.3"	""	"174.1"	""	"223.4"	""	"261.8"	"274.7"	""	"525"	"28"	"34.000"	"27.000"	"0.0408440978296332"	"26"	"0.0001301"	"0.004"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAYSLDGR"	"[K].vAYSLDGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P70490"	"Lactadherin OS=Rattus norvegicus OX=10116 GN=Mfge8 PE=2 SV=1"	"P70490"	"Lactadherin OS=Rattus norvegicus OX=10116 GN=Mfge8 PE=2 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"555.31110"	"1109.61492"	"1109.61524"	"-0.29"	"-0.00016"	"5/60"	"5"	"60"	"2308009.98919678"	"HCD"	"MS2"	"33.63498"	"128.5"	"100.000"	"49.4104"	"15097"	"15097"	"15079"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"172.8"	""	"170.6"	""	"145.6"	""	"194.3"	""	"255.0"	"283.7"	""	"525"	"26"	"34.000"	"27.000"	"0.0722985034626269"	"26"	"0.0001301"	"0.004592"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAGFTLR"	"[R].tDAGFTLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"555.31110"	"1109.61492"	"1109.61524"	"-0.29"	"-0.00016"	"5/66"	"5"	"66"	"16399576.6176758"	"HCD"	"MS2"	"0.6419401"	"378.8"	"55.211"	"53.2336"	"16656"	"16656"	"16637"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"544.9"	""	"526.4"	""	"528.0"	""	"604.4"	""	"650.8"	"737.9"	""	"525"	"39"	"34.000"	"27.000"	"0.00316321934347597"	""	"0.0002479"	"0.005176"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IENVYSR"	"[K].iENVYSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"555.31116"	"1109.61504"	"1109.61524"	"-0.18"	"-0.00010"	"5/64"	"5"	"64"	"1946143.77679443"	"HCD"	"MS2"	"0"	"106.4"	"100.000"	"43.9101"	"12861"	"12861"	"12837"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"166.9"	""	"145.3"	""	"148.6"	""	"167.9"	""	"197.7"	"187.5"	""	"539"	"24"	"34.000"	"27.000"	"0.114963180317029"	"18"	"0.005617"	"0.06319"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IENVYSR"	"[K].iENVYSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"555.31122"	"1109.61516"	"1109.61524"	"-0.07"	"-0.00004"	"5/64"	"5"	"64"	"2369275.46466064"	"HCD"	"MS2"	"7.31462"	"120.6"	"100.000"	"44.0668"	"12914"	"12914"	"12891"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"188.0"	""	"150.2"	""	"180.0"	""	"205.2"	"0.8"	"196.3"	"220.4"	""	"539"	"33"	"34.000"	"27.000"	"0.0128990809880951"	"20"	"0.00447"	"0.04771"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAGFTLR"	"[R].tDAGFTLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"555.31128"	"1109.61528"	"1109.61524"	"0.04"	"0.00002"	"5/66"	"5"	"66"	"1255581.20233154"	"HCD"	"MS2"	"22.66987"	"72.0"	"100.000"	"53.8280"	"16888"	"16888"	"16864"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"105.0"	""	"96.4"	""	"90.2"	""	"114.1"	"0.6"	"138.7"	"137.4"	""	"539"	"17"	"34.000"	"27.000"	"0.49040938139539"	"21"	"0.003717"	"0.0384"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAGFTLR"	"[R].tDAGFTLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"555.31158"	"1109.61589"	"1109.61524"	"0.59"	"0.00033"	"4/66"	"4"	"66"	"1325339.24328613"	"HCD"	"MS2"	"24.50722"	"76.0"	"100.000"	"53.5491"	"16785"	"16785"	"16764"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.7"	""	"99.7"	""	"99.5"	""	"125.8"	""	"142.1"	"144.2"	""	"537"	"17"	"34.000"	"27.000"	"0.488589680536781"	"21"	"0.004938"	"0.05256"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NANEMFR"	"[K].nANEMFR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"555.78156"	"1110.55583"	"1110.55634"	"-0.46"	"-0.00026"	"5/60"	"5"	"60"	"4697963.69720459"	"HCD"	"MS2"	"48.74996"	"295.9"	"100.000"	"38.7029"	"10741"	"10741"	"10720"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"448.0"	""	"375.4"	""	"428.2"	""	"417.4"	""	"561.7"	"578.9"	""	"398"	"19"	"32.000"	"25.000"	"0.242578930186049"	"17"	"0.007627"	"0.09178"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NANEMFR"	"[K].nANEMFR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"555.78180"	"1110.55632"	"1110.55634"	"-0.02"	"-0.00001"	"5/60"	"5"	"60"	"4811782.92205811"	"HCD"	"MS2"	"42.3923"	"294.1"	"100.000"	"38.8947"	"10810"	"10810"	"10789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"450.8"	""	"383.0"	""	"413.9"	""	"408.3"	""	"556.7"	"575.8"	""	"402"	"19"	"33.000"	"26.000"	"0.239439643613502"	"17"	"0.006254"	"0.07108"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LHDQLAGK"	"[K].LHDQLAGk.[-]"	"K8(TMT6plex)"	"1"	"1"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"0"	"2"	"2"	"0.0286"	"0.0000"	"1"	"1"	"1"	"555.82605"	"1110.64482"	"1110.64687"	"-1.85"	"-0.00103"	"6/64"	"6"	"64"	"1252579.10174561"	"HCD"	"MS2"	"25.97773"	"85.6"	"100.000"	"23.8908"	"4752"	"4752"	"4729"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"109.9"	""	"107.9"	""	"112.1"	""	"130.2"	""	"156.1"	"197.3"	""	"266"	"35"	"31.000"	"24.000"	"0.00436366739840448"	"22"	"0.001635"	"0.01997"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHDQLAGK"	"[K].LHDQLAGk.[-]"	"K8(TMT6plex)"	"1"	"1"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"0"	"2"	"2"	"0.1562"	"0.0000"	"1"	"1"	"1"	"555.82666"	"1110.64604"	"1110.64687"	"-0.75"	"-0.00042"	"6/64"	"6"	"64"	"665876.125793457"	"HCD"	"MS2"	"23.56004"	"58.7"	"100.000"	"24.0347"	"4788"	"4788"	"4758"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.2"	""	"72.7"	""	"73.6"	""	"103.8"	""	"102.4"	"129.3"	""	"263"	"32"	"31.000"	"24.000"	"0.00814565013725969"	""	"0.004676"	"0.05042"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SRPPPTGK"	"[M].sRPPPTGk.[M]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"555.82697"	"1110.64665"	"1110.64687"	"-0.20"	"-0.00011"	"6/78"	"6"	"78"	"1981430.79968262"	"HCD"	"MS2"	"30.06097"	"109.4"	"100.000"	"22.9497"	"4368"	"4368"	"4342"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"136.3"	""	"128.3"	""	"139.6"	""	"174.0"	""	"228.9"	"232.5"	""	"254"	"31"	"31.000"	"24.000"	"0.0102283062032281"	"17"	"0.005119"	"0.05824"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SRPPPTGK"	"[M].sRPPPTGk.[M]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"555.82715"	"1110.64702"	"1110.64687"	"0.13"	"0.00007"	"6/78"	"6"	"78"	"1721987.41351318"	"HCD"	"MS2"	"0"	"96.4"	"100.000"	"22.9820"	"4364"	"4364"	"4339"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"121.4"	""	"114.6"	""	"124.4"	""	"159.7"	""	"200.9"	"195.3"	""	"254"	"31"	"31.000"	"24.000"	"0.0105391047474332"	"16"	"0.004606"	"0.04976"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTPMYR"	"[R].nTTPMYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P97874"	"Cyclin-G-associated kinase OS=Rattus norvegicus OX=10116 GN=Gak PE=1 SV=1"	"P97874"	"Cyclin-G-associated kinase OS=Rattus norvegicus OX=10116 GN=Gak PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.29242"	"1111.57756"	"1111.57675"	"0.73"	"0.00041"	"5/62"	"5"	"62"	"1059249.37744141"	"HCD"	"MS2"	"29.40309"	"77.4"	"100.000"	"28.8569"	"6753"	"6753"	"6735"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"125.0"	""	"112.1"	""	"119.4"	""	"100.1"	"0.7"	"136.7"	"138.8"	""	"486"	"15"	"33.000"	"26.000"	"0.838699286586131"	"13"	"0.008837"	"0.1149"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSQDTYR"	"[R].lSQDTYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"F1M707"	"Neutrophil cytosolic factor 1 OS=Rattus norvegicus OX=10116 GN=Ncf1 PE=1 SV=2"	"F1M707"	"Neutrophil cytosolic factor 1 OS=Rattus norvegicus OX=10116 GN=Ncf1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.30023"	"1111.59319"	"1111.59450"	"-1.18"	"-0.00066"	"5/62"	"5"	"62"	"1896766.96722412"	"HCD"	"MS2"	"9.254222"	"121.7"	"100.000"	"33.8108"	"8761"	"8761"	"8731"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"172.4"	""	"165.8"	""	"182.9"	""	"212.4"	"8.3"	"202.9"	"207.4"	""	"450"	"10"	"33.000"	"26.000"	"2.09499271980261"	"13"	"0.009594"	"0.1264"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDSTGSR"	"[K].fLDSTGSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT7"	"Basic leucine zipper and W2 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Bzw2 PE=1 SV=1"	"Q9WTT7"	"Basic leucine zipper and W2 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Bzw2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"556.30042"	"1111.59355"	"1111.59450"	"-0.85"	"-0.00048"	"6/64"	"6"	"64"	"915805.057128906"	"HCD"	"MS2"	"33.03346"	"65.3"	"100.000"	"44.6973"	"13166"	"13166"	"13139"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.5"	""	"97.4"	""	"88.5"	""	"102.0"	"1.4"	"112.0"	"113.4"	""	"452"	"18"	"33.000"	"26.000"	"0.351648232742747"	"20"	"0.004942"	"0.05373"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSQDTYR"	"[R].lSQDTYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"F1M707"	"Neutrophil cytosolic factor 1 OS=Rattus norvegicus OX=10116 GN=Ncf1 PE=1 SV=2"	"F1M707"	"Neutrophil cytosolic factor 1 OS=Rattus norvegicus OX=10116 GN=Ncf1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"556.30054"	"1111.59380"	"1111.59450"	"-0.64"	"-0.00035"	"4/62"	"4"	"62"	"1968485.04833984"	"HCD"	"MS2"	"26.44345"	"123.4"	"100.000"	"33.7973"	"8749"	"8749"	"8721"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"197.9"	""	"170.3"	""	"168.4"	""	"205.0"	"4.0"	"209.8"	"211.7"	""	"450"	"11"	"33.000"	"26.000"	"1.81627881805988"	"13"	"0.008668"	"0.1096"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQVEAVHK"	"[K].AqVEAVHk.[A]"	"Q2(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q5FVG2"	"Band 4.1-like protein 5 OS=Rattus norvegicus OX=10116 GN=Epb41l5 PE=2 SV=2"	"Q5FVG2"	"Band 4.1-like protein 5 OS=Rattus norvegicus OX=10116 GN=Epb41l5 PE=2 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"556.31848"	"1111.62969"	"1111.63089"	"-1.08"	"-0.00060"	"4/68"	"4"	"68"	"2870342.40057373"	"HCD"	"MS2"	"36.57046"	"72.9"	"100.000"	"50.2166"	"15426"	"15426"	"15408"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"127.3"	""	"102.2"	""	"79.3"	""	"150.1"	""	"104.9"	"129.6"	""	"353"	"18"	"32.000"	"25.000"	"0.304610387936271"	"18"	"0.00447"	"0.04893"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQVEAVHK"	"[K].AqVEAVHk.[A]"	"Q2(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q5FVG2"	"Band 4.1-like protein 5 OS=Rattus norvegicus OX=10116 GN=Epb41l5 PE=2 SV=2"	"Q5FVG2"	"Band 4.1-like protein 5 OS=Rattus norvegicus OX=10116 GN=Epb41l5 PE=2 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"556.31866"	"1111.63005"	"1111.63089"	"-0.75"	"-0.00042"	"4/68"	"4"	"68"	"2611876.82409668"	"HCD"	"MS2"	"37.76405"	"68.5"	"100.000"	"50.5606"	"15555"	"15555"	"15534"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"128.9"	""	"99.0"	""	"81.4"	""	"127.1"	""	"87.3"	"123.1"	""	"353"	"18"	"32.000"	"25.000"	"0.30390980348503"	"18"	"0.003922"	"0.0405"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSISNYR"	"[R].sGSISNYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P54645"	"5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Prkaa1 PE=1 SV=2"	"P54645"	"5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Prkaa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"556.79865"	"1112.59001"	"1112.58975"	"0.23"	"0.00013"	"4/68"	"4"	"68"	"4046536.81976318"	"HCD"	"MS2"	"31.19355"	"265.8"	"100.000"	"28.2904"	"6523"	"6523"	"6505"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"392.9"	""	"365.2"	""	"354.0"	""	"392.7"	"5.6"	"477.5"	"531.2"	""	"345"	"16"	"32.000"	"25.000"	"0.397913890054211"	"16"	"0.0008629"	"0.01109"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEEHSR"	"[R].lLEEHSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"3"	"3"	"0.3438"	"0.0000"	"1"	"1"	"1"	"371.54645"	"1112.62479"	"1112.62614"	"-1.21"	"-0.00045"	"6/54"	"6"	"54"	"10206518.3533936"	"HCD"	"MS2"	"22.27513"	"249.3"	"93.819"	"26.4249"	"5750"	"5750"	"5735"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"343.6"	""	"327.0"	""	"340.9"	""	"413.0"	"7.5"	"445.2"	"485.5"	""	"376"	"32"	"32.000"	"25.000"	"0.0121943273507069"	""	"0.007147"	"0.08221"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASFSESR"	"[R].tASFSESR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"557.28961"	"1113.57195"	"1113.57377"	"-1.64"	"-0.00091"	"6/68"	"6"	"68"	"10388801.6452026"	"HCD"	"MS2"	"22.48875"	"486.8"	"100.000"	"28.4079"	"6557"	"6557"	"6537"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"792.3"	""	"610.5"	""	"679.0"	""	"745.2"	""	"832.7"	"956.9"	""	"336"	"38"	"32.000"	"25.000"	"0.00253109987119373"	"25"	"0.0001301"	"0.004171"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASFSESR"	"[R].tASFSESR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"557.28967"	"1113.57207"	"1113.57377"	"-1.53"	"-0.00085"	"6/68"	"6"	"68"	"14641682.7133179"	"HCD"	"MS2"	"0"	"650.7"	"100.000"	"28.4005"	"6568"	"6568"	"6550"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1073.1"	""	"807.8"	""	"932.5"	""	"981.2"	""	"1079.8"	"1298.4"	""	"336"	"36"	"32.000"	"25.000"	"0.00461646217721202"	"25"	"0.0002479"	"0.005483"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDNPQNVV"	"[R].vDNPQNVV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"557.30817"	"1113.60906"	"1113.61015"	"-0.99"	"-0.00055"	"4/62"	"4"	"62"	"1465255.68780518"	"HCD"	"MS2"	"23.67028"	"31.8"	"100.000"	"57.6667"	"18447"	"18447"	"18426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.7"	""	"45.8"	""	"42.6"	""	"55.4"	""	"51.7"	"62.6"	""	"399"	"14"	"32.000"	"26.000"	"0.79972910166647"	"13"	"0.009542"	"0.1251"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDNPQNVV"	"[R].vDNPQNVV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"557.30884"	"1113.61040"	"1113.61015"	"0.22"	"0.00012"	"4/62"	"4"	"62"	"1981584.30749512"	"HCD"	"MS2"	"26.13865"	"40.0"	"100.000"	"57.9891"	"18578"	"18578"	"18559"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.9"	""	"49.6"	""	"55.6"	""	"63.6"	""	"71.9"	"82.2"	""	"405"	"21"	"33.000"	"26.000"	"0.150461375424082"	"21"	"0.005874"	"0.06673"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITVDPIR"	"[R].aITVDPIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFC9"	"Nidogen-2 OS=Rattus norvegicus OX=10116 GN=Nid2 PE=2 SV=1"	"B5DFC9"	"Nidogen-2 OS=Rattus norvegicus OX=10116 GN=Nid2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"557.34454"	"1113.68181"	"1113.68292"	"-1.00"	"-0.00056"	"5/60"	"5"	"60"	"1376417.81890869"	"HCD"	"MS2"	"47.25665"	"55.0"	"100.000"	"60.3166"	"19511"	"19511"	"19490"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.9"	""	"63.7"	""	"75.4"	""	"85.7"	"1.2"	"120.2"	"108.1"	""	"286"	"12"	"31.000"	"24.000"	"0.898123453103045"	"13"	"0.005617"	"0.06408"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIVEPSR"	"[K].aLIVEPSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"557.34485"	"1113.68242"	"1113.68292"	"-0.45"	"-0.00025"	"5/60"	"5"	"60"	"1632435.5057373"	"HCD"	"MS2"	"20.43544"	"66.7"	"100.000"	"51.7666"	"16046"	"16046"	"16027"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"99.0"	""	"82.0"	""	"98.7"	""	"113.9"	""	"117.8"	"120.8"	""	"286"	"27"	"31.000"	"24.000"	"0.0274369629915851"	"20"	"0.0001301"	"0.003934"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILVPEGTR"	"[K].iLVPEGTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"557.34491"	"1113.68254"	"1113.68292"	"-0.34"	"-0.00019"	"5/60"	"5"	"60"	"1433706.76025391"	"HCD"	"MS2"	"24.18415"	"63.2"	"100.000"	"54.3727"	"17119"	"17119"	"17097"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.6"	""	"76.3"	""	"87.4"	""	"102.8"	""	"127.0"	"131.5"	""	"286"	"31"	"31.000"	"24.000"	"0.0107482073844603"	""	"0.003449"	"0.03384"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIVEPSR"	"[K].aLIVEPSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"557.34515"	"1113.68303"	"1113.68292"	"0.10"	"0.00005"	"5/60"	"5"	"60"	"1658517.68389893"	"HCD"	"MS2"	"17.72528"	"67.9"	"100.000"	"51.4598"	"15932"	"15932"	"15909"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.5"	""	"92.2"	""	"97.9"	""	"110.0"	"0.5"	"118.4"	"128.7"	""	"286"	"29"	"31.000"	"24.000"	"0.0177965589483308"	"19"	"0.0001301"	"0.004178"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYEFAER"	"[R].aYEFAER.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"557.78943"	"1114.57158"	"1114.57304"	"-1.31"	"-0.00073"	"10/54"	"10"	"54"	"1272888.00769043"	"HCD"	"MS2"	"5.547252"	"71.9"	"100.000"	"45.2589"	"13406"	"13406"	"13383"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.0"	""	"87.0"	""	"92.2"	""	"120.0"	""	"134.8"	"149.9"	""	"313"	"24"	"31.000"	"24.000"	"0.0601886138900978"	"17"	"0.003449"	"0.0343"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYEFAER"	"[R].aYEFAER.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"557.78955"	"1114.57182"	"1114.57304"	"-1.09"	"-0.00061"	"10/54"	"10"	"54"	"1174141.24060059"	"HCD"	"MS2"	"10.68444"	"68.7"	"100.000"	"45.4109"	"13457"	"13457"	"13435"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.3"	""	"84.2"	""	"91.0"	""	"109.1"	""	"141.9"	"144.0"	""	"313"	"24"	"31.000"	"24.000"	"0.0637550134763436"	"19"	"0.003967"	"0.04131"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYEFAER"	"[R].aYEFAER.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"557.79034"	"1114.57341"	"1114.57304"	"0.33"	"0.00019"	"9/54"	"9"	"54"	"18618408.694458"	"HCD"	"MS2"	"3.181421"	"464.2"	"56.268"	"45.0843"	"13324"	"13324"	"13307"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"615.9"	""	"549.9"	""	"584.3"	""	"746.1"	""	"934.8"	"984.5"	""	"317"	"27"	"32.000"	"25.000"	"0.031334968795773"	"21"	"0.003717"	"0.03801"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYEFAER"	"[R].aYEFAER.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"557.79034"	"1114.57341"	"1114.57304"	"0.33"	"0.00019"	"10/54"	"10"	"54"	"19673366.8289795"	"HCD"	"MS2"	"3.051609"	"511.3"	"57.814"	"44.9346"	"13274"	"13274"	"13257"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"692.4"	""	"613.8"	""	"649.9"	""	"838.6"	""	"1001.2"	"1055.8"	""	"317"	"30"	"32.000"	"25.000"	"0.0147580598261651"	"22"	"0.002973"	"0.02829"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25885"	"1115.51042"	"1115.51281"	"-2.14"	"-0.00119"	"4/58"	"4"	"58"	"593325.265197754"	"HCD"	"MS2"	"8.820436"	"13.3"	"100.000"	"81.8700"	"28237"	"28237"	"28216"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.9"	""	"12.3"	""	"15.8"	""	"27.2"	""	"24.5"	"30.9"	""	"141"	"11"	"28.000"	"21.000"	"0.587745235156843"	"13"	"0.009081"	"0.1169"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25891"	"1115.51055"	"1115.51281"	"-2.03"	"-0.00113"	"4/58"	"4"	"58"	"304142.677124023"	"HCD"	"MS2"	"9.481761"	"14.2"	"100.000"	"80.1530"	"27545"	"27545"	"27526"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.0"	""	"15.4"	""	"18.0"	""	"26.5"	""	"30.7"	"29.4"	""	"141"	"21"	"28.000"	"21.000"	"0.0513084762198461"	"14"	"0.003581"	"0.03742"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25903"	"1115.51079"	"1115.51281"	"-1.81"	"-0.00101"	"6/58"	"6"	"58"	"335735.810668945"	"HCD"	"MS2"	"0"	"11.3"	"100.000"	"90.8887"	"31762"	"31762"	"31745"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.7"	""	"11.1"	""	"15.6"	""	"19.8"	""	"20.8"	"26.8"	""	"141"	"56"	"28.000"	"21.000"	"1.63376322822778E-05"	"16"	"0"	"0.002966"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25922"	"1115.51116"	"1115.51281"	"-1.48"	"-0.00083"	"5/58"	"5"	"58"	"299933.361877441"	"HCD"	"MS2"	"0"	"10.1"	"100.000"	"90.9314"	"31783"	"31783"	"31767"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.8"	""	"13.0"	""	"15.6"	""	"18.2"	""	"20.3"	"21.1"	""	"139"	"40"	"28.000"	"21.000"	"0.000685464242513691"	"15"	"0.0006732"	"0.009182"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25922"	"1115.51116"	"1115.51281"	"-1.48"	"-0.00083"	"6/58"	"6"	"58"	"544026.316772461"	"HCD"	"MS2"	"42.44743"	"19.1"	"100.000"	"89.4354"	"31198"	"31198"	"31189"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.6"	""	"26.5"	""	"18.2"	""	"32.6"	""	"42.2"	"33.5"	""	"139"	"28"	"28.000"	"21.000"	"0.0106410578586901"	"14"	"0.001211"	"0.01481"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25934"	"1115.51140"	"1115.51281"	"-1.26"	"-0.00070"	"5/58"	"5"	"58"	"346677.664001465"	"HCD"	"MS2"	"55.6222"	"17.4"	"100.000"	"94.2037"	"33028"	"33028"	"33016"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.2"	""	"14.5"	""	"12.5"	""	"30.6"	""	"20.0"	"79.7"	""	"144"	"15"	"28.000"	"21.000"	"0.233524524491532"	"13"	"0.003449"	"0.03486"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25934"	"1115.51140"	"1115.51281"	"-1.26"	"-0.00070"	"5/58"	"5"	"58"	"464866.219909668"	"HCD"	"MS2"	"9.517302"	"15.6"	"100.000"	"86.6061"	"30098"	"30098"	"30086"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.9"	""	"14.3"	""	"20.7"	""	"26.7"	""	"32.5"	"34.1"	""	"144"	"37"	"28.000"	"21.000"	"0.00160447330747462"	"15"	"0.0006732"	"0.008436"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25940"	"1115.51152"	"1115.51281"	"-1.15"	"-0.00064"	"5/58"	"5"	"58"	"285439.881530762"	"HCD"	"MS2"	"11.70021"	"10.3"	"100.000"	"90.5978"	"31650"	"31650"	"31633"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.3"	""	"13.1"	""	"10.3"	""	"15.8"	""	"22.2"	"24.2"	""	"142"	"28"	"28.000"	"21.000"	"0.0120021306146672"	"14"	"0.001546"	"0.01931"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25940"	"1115.51152"	"1115.51281"	"-1.15"	"-0.00064"	"5/58"	"5"	"58"	"274066.359802246"	"HCD"	"MS2"	"16.89357"	"10.4"	"100.000"	"92.5252"	"32387"	"32387"	"32374"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.9"	""	"8.7"	""	"10.7"	""	"14.0"	""	"14.3"	"41.3"	""	"142"	"22"	"28.000"	"21.000"	"0.0459471257181494"	"14"	"0.002871"	"0.02707"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25940"	"1115.51152"	"1115.51281"	"-1.15"	"-0.00064"	"5/58"	"5"	"58"	"451002.782775879"	"HCD"	"MS2"	"16.1799"	"16.4"	"100.000"	"87.2782"	"30362"	"30362"	"30350"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.8"	""	"21.4"	""	"19.2"	""	"25.6"	""	"35.5"	"30.6"	""	"142"	"40"	"28.000"	"21.000"	"0.000787514118836305"	"15"	"0.001311"	"0.01574"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25940"	"1115.51152"	"1115.51281"	"-1.15"	"-0.00064"	"4/58"	"4"	"58"	"450037.956298828"	"HCD"	"MS2"	"0"	"17.8"	"100.000"	"74.2501"	"25172"	"25172"	"25153"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.1"	""	"16.9"	""	"19.6"	""	"34.0"	""	"38.8"	"41.5"	""	"142"	"25"	"28.000"	"21.000"	"0.0212450789199181"	"14"	"0.003449"	"0.03297"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25946"	"1115.51164"	"1115.51281"	"-1.04"	"-0.00058"	"4/58"	"4"	"58"	"297266.107666016"	"HCD"	"MS2"	"6.220877"	"12.5"	"100.000"	"81.4906"	"28084"	"28084"	"28065"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.1"	""	"9.1"	""	"17.6"	""	"27.0"	""	"24.6"	"26.0"	""	"141"	"25"	"28.000"	"21.000"	"0.0204262722932943"	"14"	"0.0023"	"0.02316"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25946"	"1115.51164"	"1115.51281"	"-1.04"	"-0.00058"	"4/58"	"4"	"58"	"187087.13659668"	"HCD"	"MS2"	"23.83084"	"7.0"	"100.000"	"97.4676"	"34163"	"34163"	"34156"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.7"	""	"6.7"	""	"9.3"	""	"13.3"	""	"15.4"	"14.9"	""	"141"	"21"	"28.000"	"21.000"	"0.0534797190395575"	"14"	"0.002056"	"0.02223"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25946"	"1115.51164"	"1115.51281"	"-1.04"	"-0.00058"	"4/58"	"4"	"58"	"621827.335510254"	"HCD"	"MS2"	"31.96468"	"13.6"	"100.000"	"88.1558"	"30707"	"30707"	"30698"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.7"	""	"14.8"	""	"19.1"	""	"21.4"	""	"35.0"	"26.9"	""	"141"	"21"	"28.000"	"21.000"	"0.0604211680887411"	"14"	"0.004022"	"0.04311"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25946"	"1115.51164"	"1115.51281"	"-1.04"	"-0.00058"	"4/58"	"4"	"58"	"765507.391601563"	"HCD"	"MS2"	"49.47716"	"22.7"	"100.000"	"88.9227"	"30998"	"30998"	"30986"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.6"	""	"34.3"	""	"31.1"	""	"38.7"	""	"41.4"	"37.5"	""	"141"	"9"	"28.000"	"21.000"	"0.957610979843945"	"13"	"0.007686"	"0.09441"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25952"	"1115.51177"	"1115.51281"	"-0.93"	"-0.00052"	"5/58"	"5"	"58"	"285994.948974609"	"HCD"	"MS2"	"43.96999"	"20.4"	"100.000"	"93.8278"	"32893"	"32893"	"32884"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.8"	""	"6.8"	""	"10.2"	""	"15.7"	""	"17.3"	"143.9"	""	"141"	"22"	"28.000"	"21.000"	"0.0443801858914324"	"14"	"0.001812"	"0.02035"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25952"	"1115.51177"	"1115.51281"	"-0.93"	"-0.00052"	"5/58"	"5"	"58"	"279778.456970215"	"HCD"	"MS2"	"25.68205"	"10.4"	"100.000"	"91.7802"	"32107"	"32107"	"32095"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.7"	""	"9.6"	""	"11.0"	""	"22.6"	""	"22.7"	"20.0"	""	"141"	"25"	"28.000"	"21.000"	"0.0203324220970426"	"14"	"0.0023"	"0.02426"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25952"	"1115.51177"	"1115.51281"	"-0.93"	"-0.00052"	"5/58"	"5"	"58"	"177733.374633789"	"HCD"	"MS2"	"10.25606"	"6.2"	"100.000"	"96.1509"	"33707"	"33707"	"33698"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.5"	""	"10.1"	""	"7.8"	""	"12.0"	""	"13.0"	"10.7"	""	"141"	"17"	"28.000"	"21.000"	"0.128881065238063"	"14"	"0.003507"	"0.03641"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25952"	"1115.51177"	"1115.51281"	"-0.93"	"-0.00052"	"5/58"	"5"	"58"	"668232.141601563"	"HCD"	"MS2"	"48.37046"	"14.7"	"100.000"	"83.3459"	"28818"	"28818"	"28812"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.2"	""	"15.0"	""	"17.4"	""	"22.1"	""	"31.9"	"32.4"	""	"141"	"15"	"28.000"	"21.000"	"0.243326336231779"	"13"	"0.006308"	"0.07185"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25952"	"1115.51177"	"1115.51281"	"-0.93"	"-0.00052"	"5/58"	"5"	"58"	"712925.313781738"	"HCD"	"MS2"	"42.0911"	"21.0"	"100.000"	"88.7647"	"30940"	"30940"	"30927"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.8"	""	"26.9"	""	"25.7"	""	"37.9"	""	"37.4"	"45.0"	""	"141"	"18"	"28.000"	"21.000"	"0.100969246898785"	"14"	"0.003449"	"0.03271"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25952"	"1115.51177"	"1115.51281"	"-0.93"	"-0.00052"	"6/58"	"6"	"58"	"1250301.95220947"	"HCD"	"MS2"	"45.03642"	"33.0"	"100.000"	"73.7881"	"24971"	"24971"	"24953"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.1"	""	"35.5"	""	"33.7"	""	"64.4"	""	"76.4"	"73.6"	""	"141"	"28"	"28.000"	"21.000"	"0.0106215798166165"	"14"	"0.0023"	"0.0237"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25958"	"1115.51189"	"1115.51281"	"-0.82"	"-0.00046"	"5/58"	"5"	"58"	"319048.989562988"	"HCD"	"MS2"	"49.04147"	"22.0"	"100.000"	"93.6682"	"32816"	"32816"	"32809"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.9"	""	"8.2"	""	"6.9"	""	"14.7"	""	"15.5"	"160.9"	""	"141"	"22"	"28.000"	"21.000"	"0.0441762774593997"	"14"	"0.0023"	"0.02336"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25958"	"1115.51189"	"1115.51281"	"-0.82"	"-0.00046"	"4/58"	"4"	"58"	"245281.772399902"	"HCD"	"MS2"	"19.67909"	"13.4"	"100.000"	"79.4740"	"27268"	"27268"	"27250"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.3"	""	"20.0"	""	"11.7"	""	"17.7"	""	"25.5"	"35.3"	""	"141"	"19"	"28.000"	"21.000"	"0.0922973255714583"	"14"	"0.00447"	"0.04666"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25958"	"1115.51189"	"1115.51281"	"-0.82"	"-0.00046"	"5/58"	"5"	"58"	"606944.768981934"	"HCD"	"MS2"	"34.92168"	"14.7"	"100.000"	"85.5347"	"29680"	"29680"	"29674"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.0"	""	"17.2"	""	"17.2"	""	"19.8"	""	"28.4"	"36.9"	""	"141"	"32"	"28.000"	"21.000"	"0.00481048779369877"	"14"	"0.0008629"	"0.01094"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25958"	"1115.51189"	"1115.51281"	"-0.82"	"-0.00046"	"6/58"	"6"	"58"	"683275.597595215"	"HCD"	"MS2"	"49.43843"	"15.1"	"100.000"	"83.2929"	"28799"	"28799"	"28789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.2"	""	"18.8"	""	"18.7"	""	"23.8"	"0.9"	"30.5"	"34.0"	""	"141"	"29"	"28.000"	"21.000"	"0.00897819672116747"	"14"	"0.001374"	"0.01801"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25964"	"1115.51201"	"1115.51281"	"-0.71"	"-0.00040"	"5/58"	"5"	"58"	"258668.835632324"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"91.1768"	"31877"	"31877"	"31860"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.4"	""	"7.3"	""	"7.8"	""	"15.1"	""	"13.0"	"17.1"	""	"141"	"24"	"28.000"	"21.000"	"0.0290528750963618"	"14"	"0.0023"	"0.02409"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25964"	"1115.51201"	"1115.51281"	"-0.71"	"-0.00040"	"5/58"	"5"	"58"	"603210.928955078"	"HCD"	"MS2"	"25.06584"	"13.3"	"100.000"	"85.4973"	"29666"	"29666"	"29654"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.2"	""	"20.7"	""	"15.4"	""	"20.8"	""	"29.8"	"27.5"	""	"141"	"21"	"28.000"	"21.000"	"0.0565183034688314"	"14"	"0.003507"	"0.03609"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25964"	"1115.51201"	"1115.51281"	"-0.71"	"-0.00040"	"5/58"	"5"	"58"	"563352.729064941"	"HCD"	"MS2"	"39.81432"	"18.9"	"100.000"	"89.4140"	"31189"	"31189"	"31180"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.8"	""	"27.5"	""	"21.0"	""	"33.7"	""	"36.2"	"39.6"	""	"141"	"13"	"28.000"	"21.000"	"0.325228890065068"	"13"	"0.005427"	"0.06203"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25964"	"1115.51201"	"1115.51281"	"-0.71"	"-0.00040"	"5/58"	"5"	"58"	"3441605.48370361"	"HCD"	"MS2"	"4.602597"	"70.7"	"100.000"	"74.0624"	"25083"	"25083"	"25070"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.3"	""	"48.9"	""	"55.2"	""	"176.6"	""	"175.5"	"161.6"	""	"141"	"37"	"28.000"	"21.000"	"0.00130975214083965"	"15"	"0.001546"	"0.01918"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25970"	"1115.51213"	"1115.51281"	"-0.61"	"-0.00034"	"4/58"	"4"	"58"	"218672.068786621"	"HCD"	"MS2"	"7.376703"	"10.6"	"100.000"	"79.8320"	"27416"	"27416"	"27398"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.6"	""	"9.8"	""	"14.9"	""	"19.9"	""	"17.5"	"24.5"	""	"141"	"25"	"28.000"	"21.000"	"0.021192837933529"	"14"	"0.001812"	"0.0207"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25970"	"1115.51213"	"1115.51281"	"-0.61"	"-0.00034"	"5/58"	"5"	"58"	"300643.346130371"	"HCD"	"MS2"	"40.62447"	"13.7"	"100.000"	"94.3335"	"33053"	"33053"	"33045"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.1"	""	"9.7"	""	"9.7"	""	"23.8"	""	"15.0"	"59.6"	""	"141"	"12"	"28.000"	"21.000"	"0.447908306955479"	"13"	"0.004676"	"0.05028"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25970"	"1115.51213"	"1115.51281"	"-0.61"	"-0.00034"	"6/58"	"6"	"58"	"469870.311584473"	"HCD"	"MS2"	"10.32942"	"13.8"	"100.000"	"85.2204"	"29561"	"29561"	"29553"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.7"	""	"12.5"	""	"15.8"	""	"26.0"	""	"37.8"	"29.4"	""	"141"	"31"	"28.000"	"21.000"	"0.00591819290496175"	"14"	"0.000936"	"0.01197"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25970"	"1115.51213"	"1115.51281"	"-0.61"	"-0.00034"	"4/58"	"4"	"58"	"464945.026367188"	"HCD"	"MS2"	"19.42248"	"14.6"	"100.000"	"86.6641"	"30124"	"30124"	"30113"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.6"	""	"17.5"	""	"16.0"	""	"24.2"	""	"28.3"	"36.7"	""	"141"	"26"	"28.000"	"21.000"	"0.0192392933687967"	"14"	"0.002056"	"0.02213"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25970"	"1115.51213"	"1115.51281"	"-0.61"	"-0.00034"	"4/58"	"4"	"58"	"381023.562744141"	"HCD"	"MS2"	"15.57718"	"13.2"	"100.000"	"82.4962"	"28487"	"28487"	"28469"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.7"	""	"15.4"	""	"14.1"	""	"21.2"	""	"26.8"	"34.7"	""	"141"	"26"	"28.000"	"21.000"	"0.0188881366899742"	"14"	"0.0023"	"0.02354"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25970"	"1115.51213"	"1115.51281"	"-0.61"	"-0.00034"	"4/58"	"4"	"58"	"414300.268615723"	"HCD"	"MS2"	"0"	"14.2"	"100.000"	"82.7171"	"28573"	"28573"	"28549"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.4"	""	"17.8"	""	"15.9"	""	"26.0"	"0.9"	"28.0"	"30.7"	""	"141"	"25"	"28.000"	"21.000"	"0.0209985408274758"	"14"	"0.003449"	"0.03384"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25970"	"1115.51213"	"1115.51281"	"-0.61"	"-0.00034"	"4/58"	"4"	"58"	"281416.668640137"	"HCD"	"MS2"	"58.32579"	"11.9"	"100.000"	"96.6594"	"33894"	"33894"	"33887"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.5"	""	"16.6"	""	"18.7"	""	"20.8"	""	"19.6"	"24.7"	""	"141"	"14"	"28.000"	"21.000"	"0.307743661729317"	"13"	"0.003449"	"0.03401"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25970"	"1115.51213"	"1115.51281"	"-0.61"	"-0.00034"	"4/58"	"4"	"58"	"474867.88494873"	"HCD"	"MS2"	"13.09377"	"13.3"	"100.000"	"84.9405"	"29450"	"29450"	"29433"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.8"	""	"11.7"	""	"16.2"	""	"21.0"	""	"31.8"	"30.9"	""	"141"	"29"	"28.000"	"21.000"	"0.00964248822045074"	"14"	"0.002973"	"0.03"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25970"	"1115.51213"	"1115.51281"	"-0.61"	"-0.00034"	"6/58"	"6"	"58"	"596069.22064209"	"HCD"	"MS2"	"7.957383"	"23.1"	"100.000"	"74.3668"	"25206"	"25206"	"25185"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.2"	""	"22.3"	""	"25.6"	""	"47.9"	""	"47.4"	"49.2"	""	"141"	"33"	"28.000"	"21.000"	"0.00345294067654755"	"15"	"0.000936"	"0.01218"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25970"	"1115.51213"	"1115.51281"	"-0.61"	"-0.00034"	"4/58"	"4"	"58"	"660011.717712402"	"HCD"	"MS2"	"50.10853"	"20.3"	"100.000"	"86.0759"	"29892"	"29892"	"29876"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.9"	""	"25.1"	""	"25.1"	""	"29.7"	""	"34.9"	"48.2"	""	"141"	"23"	"28.000"	"21.000"	"0.0325978620086479"	"14"	"0.001465"	"0.0182"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25977"	"1115.51225"	"1115.51281"	"-0.50"	"-0.00028"	"5/58"	"5"	"58"	"347544.177307129"	"HCD"	"MS2"	"59.94695"	"22.4"	"100.000"	"93.2429"	"32674"	"32674"	"32665"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.5"	""	"10.0"	""	"8.0"	""	"13.3"	""	"11.7"	"170.6"	""	"141"	"23"	"28.000"	"21.000"	"0.0356606386712195"	"14"	"0.002547"	"0.0254"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25977"	"1115.51225"	"1115.51281"	"-0.50"	"-0.00028"	"4/58"	"4"	"58"	"167299.069274902"	"HCD"	"MS2"	"49.60045"	"6.7"	"100.000"	"95.2126"	"33376"	"33376"	"33360"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.0"	""	"6.6"	""	"3.2"	""	"19.9"	""	"9.9"	"15.8"	""	"141"	"20"	"28.000"	"21.000"	"0.0745056343995629"	"14"	"0.002871"	"0.02678"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25977"	"1115.51225"	"1115.51281"	"-0.50"	"-0.00028"	"5/58"	"5"	"58"	"164330.170837402"	"HCD"	"MS2"	"47.28915"	"6.6"	"100.000"	"97.6212"	"34237"	"34237"	"34219"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.6"	""	"9.9"	""	"8.7"	""	"12.2"	""	"10.4"	"10.8"	""	"141"	"21"	"28.000"	"21.000"	"0.0569100696325431"	"14"	"0.001546"	"0.01908"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25977"	"1115.51225"	"1115.51281"	"-0.50"	"-0.00028"	"6/58"	"6"	"58"	"279743.310546875"	"HCD"	"MS2"	"15.40334"	"9.0"	"100.000"	"91.2286"	"31901"	"31901"	"31889"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.8"	""	"9.9"	""	"12.3"	""	"13.9"	""	"20.5"	"22.9"	""	"141"	"38"	"28.000"	"21.000"	"0.00111477986768562"	"15"	"0.0002479"	"0.005197"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25977"	"1115.51225"	"1115.51281"	"-0.50"	"-0.00028"	"5/58"	"5"	"58"	"301543.654052734"	"HCD"	"MS2"	"33.65767"	"12.8"	"100.000"	"80.8999"	"27846"	"27846"	"27829"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.8"	""	"15.5"	""	"17.8"	""	"23.3"	""	"23.8"	"27.5"	""	"141"	"22"	"28.000"	"21.000"	"0.0399198698771969"	"14"	"0.001978"	"0.0221"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25977"	"1115.51225"	"1115.51281"	"-0.50"	"-0.00028"	"5/58"	"5"	"58"	"302021.005371094"	"HCD"	"MS2"	"16.54466"	"11.7"	"100.000"	"81.3722"	"28035"	"28035"	"28017"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.5"	""	"16.1"	""	"16.4"	""	"19.4"	""	"24.4"	"22.0"	""	"141"	"22"	"28.000"	"21.000"	"0.0465788880845355"	"14"	"0.003449"	"0.03528"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25977"	"1115.51225"	"1115.51281"	"-0.50"	"-0.00028"	"5/58"	"5"	"58"	"285800.741088867"	"HCD"	"MS2"	"19.20826"	"12.9"	"100.000"	"80.1016"	"27521"	"27521"	"27498"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.5"	""	"13.8"	""	"17.0"	""	"24.0"	""	"24.1"	"28.6"	""	"141"	"21"	"28.000"	"21.000"	"0.0583699225417196"	"14"	"0.002973"	"0.02939"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25977"	"1115.51225"	"1115.51281"	"-0.50"	"-0.00028"	"5/58"	"5"	"58"	"311455.616394043"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"81.1976"	"27966"	"27966"	"27949"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.2"	""	"18.7"	""	"15.2"	""	"22.5"	""	"27.2"	"24.7"	""	"141"	"32"	"28.000"	"21.000"	"0.00418975971823979"	"15"	"0.0008629"	"0.01049"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25977"	"1115.51225"	"1115.51281"	"-0.50"	"-0.00028"	"5/58"	"5"	"58"	"360429.877258301"	"HCD"	"MS2"	"25.78839"	"12.9"	"100.000"	"90.2826"	"31524"	"31524"	"31515"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.5"	""	"10.7"	""	"13.7"	""	"25.5"	""	"26.4"	"33.5"	""	"141"	"23"	"28.000"	"21.000"	"0.033743421508746"	"14"	"0.0023"	"0.02435"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25977"	"1115.51225"	"1115.51281"	"-0.50"	"-0.00028"	"6/58"	"6"	"58"	"419443.773681641"	"HCD"	"MS2"	"12.05797"	"15.0"	"100.000"	"84.7019"	"29354"	"29354"	"29336"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.5"	"2.0"	"14.0"	""	"20.8"	""	"25.3"	"1.5"	"31.9"	"29.4"	""	"141"	"35"	"28.000"	"21.000"	"0.00226041987377636"	"15"	"0.000936"	"0.01339"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25977"	"1115.51225"	"1115.51281"	"-0.50"	"-0.00028"	"4/58"	"4"	"58"	"468215.258056641"	"HCD"	"MS2"	"8.739135"	"16.2"	"100.000"	"85.2804"	"29580"	"29580"	"29569"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.8"	""	"20.4"	""	"17.5"	""	"28.6"	"0.7"	"23.7"	"41.5"	""	"141"	"24"	"28.000"	"21.000"	"0.0309876838883666"	"14"	"0.00263"	"0.02578"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25977"	"1115.51225"	"1115.51281"	"-0.50"	"-0.00028"	"5/58"	"5"	"58"	"473336.227661133"	"HCD"	"MS2"	"19.40672"	"14.7"	"100.000"	"83.0761"	"28715"	"28715"	"28701"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.9"	""	"16.5"	""	"16.4"	""	"24.0"	""	"28.6"	"36.9"	""	"141"	"36"	"28.000"	"21.000"	"0.00171470382639704"	"15"	"0.0006732"	"0.008166"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25977"	"1115.51225"	"1115.51281"	"-0.50"	"-0.00028"	"5/58"	"5"	"58"	"878775.813903809"	"HCD"	"MS2"	"52.48258"	"27.6"	"100.000"	"88.6419"	"30890"	"30890"	"30884"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.8"	""	"35.9"	""	"37.6"	""	"47.8"	""	"46.5"	"53.2"	""	"141"	"18"	"28.000"	"21.000"	"0.115395564760661"	"14"	"0.002973"	"0.02912"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25977"	"1115.51225"	"1115.51281"	"-0.50"	"-0.00028"	"6/58"	"6"	"58"	"1426078.48809814"	"HCD"	"MS2"	"47.29498"	"36.3"	"100.000"	"73.6550"	"24930"	"24930"	"24909"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.8"	""	"34.2"	""	"37.8"	""	"79.4"	"0.1"	"83.1"	"75.4"	""	"141"	"36"	"28.000"	"21.000"	"0.00189316783418925"	"15"	"0.000936"	"0.01202"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25983"	"1115.51238"	"1115.51281"	"-0.39"	"-0.00022"	"5/58"	"5"	"58"	"258013.983154297"	"HCD"	"MS2"	"9.695377"	"8.3"	"100.000"	"91.5035"	"32003"	"32003"	"31992"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.7"	""	"9.4"	""	"8.4"	""	"13.4"	""	"19.4"	"19.4"	""	"141"	"27"	"28.000"	"21.000"	"0.0155306315645269"	"14"	"0.00263"	"0.0256"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25983"	"1115.51238"	"1115.51281"	"-0.39"	"-0.00022"	"4/58"	"4"	"58"	"250032.830932617"	"HCD"	"MS2"	"19.92745"	"9.6"	"100.000"	"92.0633"	"32217"	"32217"	"32204"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.5"	""	"10.2"	""	"12.0"	""	"16.7"	""	"17.2"	"23.0"	""	"141"	"29"	"28.000"	"21.000"	"0.00988983661716181"	"14"	"0.001374"	"0.01777"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25983"	"1115.51238"	"1115.51281"	"-0.39"	"-0.00022"	"5/58"	"5"	"58"	"207406.195739746"	"HCD"	"MS2"	"45.13676"	"9.0"	"100.000"	"94.8132"	"33248"	"33248"	"33232"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.7"	""	"8.6"	""	"10.9"	""	"14.6"	""	"13.7"	"28.6"	""	"141"	"18"	"28.000"	"21.000"	"0.111477986768562"	"14"	"0.001728"	"0.02018"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25983"	"1115.51238"	"1115.51281"	"-0.39"	"-0.00022"	"4/58"	"4"	"58"	"298829.128173828"	"HCD"	"MS2"	"23.73905"	"14.1"	"100.000"	"92.6561"	"32450"	"32450"	"32428"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.2"	""	"11.4"	""	"13.4"	""	"17.0"	""	"19.5"	"59.9"	""	"141"	"23"	"28.000"	"21.000"	"0.0333571637567844"	"14"	"0.0023"	"0.0241"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25983"	"1115.51238"	"1115.51281"	"-0.39"	"-0.00022"	"5/58"	"5"	"58"	"276743.378601074"	"HCD"	"MS2"	"26.19064"	"8.2"	"100.000"	"92.2516"	"32281"	"32281"	"32269"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.8"	""	"7.8"	""	"10.6"	""	"13.0"	""	"15.8"	"20.9"	""	"141"	"27"	"28.000"	"21.000"	"0.0136203766349693"	"14"	"0.001374"	"0.01773"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25983"	"1115.51238"	"1115.51281"	"-0.39"	"-0.00022"	"4/58"	"4"	"58"	"423874.465637207"	"HCD"	"MS2"	"11.21023"	"15.3"	"100.000"	"84.3845"	"29230"	"29230"	"29215"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.9"	""	"15.1"	""	"21.2"	""	"27.3"	""	"31.9"	"36.1"	""	"141"	"26"	"28.000"	"21.000"	"0.0179965441837618"	"14"	"0.002056"	"0.02255"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25983"	"1115.51238"	"1115.51281"	"-0.39"	"-0.00022"	"5/58"	"5"	"58"	"318436.154785156"	"HCD"	"MS2"	"23.23138"	"10.5"	"100.000"	"92.3554"	"32331"	"32331"	"32317"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.2"	""	"6.5"	""	"10.8"	""	"15.6"	""	"23.2"	"34.6"	""	"141"	"23"	"28.000"	"21.000"	"0.0358252407005195"	"14"	"0.002973"	"0.03028"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25983"	"1115.51238"	"1115.51281"	"-0.39"	"-0.00022"	"4/58"	"4"	"58"	"574129.69744873"	"HCD"	"MS2"	"42.21031"	"13.5"	"100.000"	"88.1838"	"30722"	"30722"	"30712"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.1"	""	"11.9"	""	"19.4"	"1.9"	"21.5"	""	"26.5"	"35.1"	""	"141"	"21"	"28.000"	"21.000"	"0.0513084762198461"	"14"	"0.00447"	"0.0483"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25989"	"1115.51250"	"1115.51281"	"-0.28"	"-0.00015"	"5/58"	"5"	"58"	"249784.554748535"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"91.4629"	"31982"	"31982"	"31974"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.4"	""	"8.2"	""	"9.9"	""	"15.2"	""	"19.7"	"22.1"	""	"141"	"25"	"28.000"	"21.000"	"0.0237787552604503"	"14"	"0.001374"	"0.01768"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25989"	"1115.51250"	"1115.51281"	"-0.28"	"-0.00015"	"4/58"	"4"	"58"	"230523.067626953"	"HCD"	"MS2"	"34.09705"	"11.1"	"100.000"	"94.4790"	"33126"	"33126"	"33114"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.7"	""	"6.1"	""	"11.0"	""	"14.5"	""	"16.5"	"49.1"	""	"141"	"20"	"28.000"	"21.000"	"0.0647424480520925"	"14"	"0.001886"	"0.02141"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25989"	"1115.51250"	"1115.51281"	"-0.28"	"-0.00015"	"5/58"	"5"	"58"	"188176.197387695"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"96.3718"	"33809"	"33809"	"33800"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.9"	""	"7.5"	""	"8.4"	""	"10.8"	""	"13.0"	"15.5"	""	"141"	"19"	"28.000"	"21.000"	"0.0820708850734397"	"14"	"0.002711"	"0.0259"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25989"	"1115.51250"	"1115.51281"	"-0.28"	"-0.00015"	"4/58"	"4"	"58"	"264125.409729004"	"HCD"	"MS2"	"26.75241"	"8.9"	"100.000"	"91.9612"	"32170"	"32170"	"32158"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.8"	""	"9.1"	""	"8.6"	""	"14.8"	""	"19.9"	"23.5"	""	"141"	"25"	"28.000"	"21.000"	"0.0215371938481694"	"14"	"0.002795"	"0.02631"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25989"	"1115.51250"	"1115.51281"	"-0.28"	"-0.00015"	"4/58"	"4"	"58"	"569652.75579834"	"HCD"	"MS2"	"26.31045"	"19.0"	"100.000"	"86.3740"	"30012"	"30012"	"29993"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.0"	""	"18.7"	""	"25.6"	""	"31.2"	"0.9"	"35.9"	"43.8"	""	"141"	"25"	"28.000"	"21.000"	"0.0226563067974143"	"14"	"0.001465"	"0.01833"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25989"	"1115.51250"	"1115.51281"	"-0.28"	"-0.00015"	"6/58"	"6"	"58"	"535729.001708984"	"HCD"	"MS2"	"25.7837"	"17.4"	"100.000"	"86.3347"	"29993"	"29993"	"29977"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.8"	""	"18.2"	""	"19.0"	""	"32.3"	"2.6"	"27.0"	"40.4"	""	"141"	"22"	"28.000"	"21.000"	"0.0409438914352525"	"14"	"0.002973"	"0.02875"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25989"	"1115.51250"	"1115.51281"	"-0.28"	"-0.00015"	"5/58"	"5"	"58"	"468587.394836426"	"HCD"	"MS2"	"16.69551"	"11.9"	"100.000"	"84.9869"	"29468"	"29468"	"29451"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.1"	""	"12.8"	""	"16.0"	""	"19.3"	""	"24.4"	"29.4"	""	"141"	"27"	"28.000"	"21.000"	"0.0149688734571016"	"14"	"0.0023"	"0.02402"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25995"	"1115.51262"	"1115.51281"	"-0.17"	"-0.00009"	"5/58"	"5"	"58"	"170632.917297363"	"HCD"	"MS2"	"13.25681"	"6.7"	"100.000"	"96.1039"	"33712"	"33712"	"33704"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.6"	""	"7.8"	""	"7.9"	""	"12.0"	""	"10.1"	"16.5"	""	"141"	"23"	"28.000"	"21.000"	"0.0322247173678487"	"14"	"0.002973"	"0.02879"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25995"	"1115.51262"	"1115.51281"	"-0.17"	"-0.00009"	"5/58"	"5"	"58"	"149630.705505371"	"HCD"	"MS2"	"37.24149"	"6.2"	"100.000"	"97.1620"	"34069"	"34069"	"34062"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.4"	""	"8.4"	""	"8.2"	""	"10.0"	""	"12.7"	"9.6"	""	"141"	"19"	"28.000"	"21.000"	"0.0979916605005415"	"14"	"0.002973"	"0.02923"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25995"	"1115.51262"	"1115.51281"	"-0.17"	"-0.00009"	"5/58"	"5"	"58"	"259918.17767334"	"HCD"	"MS2"	"37.62951"	"15.9"	"100.000"	"93.9246"	"32907"	"32907"	"32903"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.7"	""	"7.3"	""	"6.2"	""	"15.5"	""	"9.3"	"108.0"	""	"141"	"19"	"28.000"	"21.000"	"0.0897819672116747"	"14"	"0.002973"	"0.02982"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25995"	"1115.51262"	"1115.51281"	"-0.17"	"-0.00009"	"4/58"	"4"	"58"	"151171.298217773"	"HCD"	"MS2"	"29.61951"	"6.3"	"100.000"	"97.0300"	"34042"	"34042"	"34034"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.7"	""	"6.5"	""	"10.1"	""	"9.8"	""	"13.4"	"12.9"	""	"141"	"13"	"28.000"	"21.000"	"0.338991740657059"	"13"	"0.007602"	"0.09016"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25995"	"1115.51262"	"1115.51281"	"-0.17"	"-0.00009"	"5/58"	"5"	"58"	"298535.636962891"	"HCD"	"MS2"	"10.20495"	"9.6"	"100.000"	"90.5692"	"31635"	"31635"	"31621"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.4"	""	"11.8"	""	"11.1"	""	"14.0"	""	"21.8"	"23.2"	""	"141"	"40"	"28.000"	"21.000"	"0.000739927412199888"	"15"	"0.0004639"	"0.007971"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25995"	"1115.51262"	"1115.51281"	"-0.17"	"-0.00009"	"4/58"	"4"	"58"	"177963.308044434"	"HCD"	"MS2"	"20.08011"	"6.5"	"100.000"	"95.8334"	"33618"	"33618"	"33613"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.1"	""	"6.0"	""	"6.7"	""	"11.3"	""	"13.8"	"16.1"	""	"141"	"21"	"28.000"	"21.000"	"0.055231789815018"	"14"	"0.006308"	"0.0722"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25995"	"1115.51262"	"1115.51281"	"-0.17"	"-0.00009"	"5/58"	"5"	"58"	"410417.332580566"	"HCD"	"MS2"	"6.535844"	"16.0"	"100.000"	"86.8840"	"30208"	"30208"	"30196"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.7"	""	"21.4"	""	"23.2"	""	"26.8"	""	"29.2"	"26.0"	""	"141"	"23"	"28.000"	"21.000"	"0.0320766582405784"	"14"	"0.001374"	"0.01698"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25995"	"1115.51262"	"1115.51281"	"-0.17"	"-0.00009"	"6/58"	"6"	"58"	"425725.409423828"	"HCD"	"MS2"	"20.35153"	"15.1"	"100.000"	"87.6067"	"30498"	"30498"	"30485"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.2"	""	"17.2"	""	"13.8"	""	"27.2"	""	"31.8"	"34.5"	""	"141"	"35"	"28.000"	"21.000"	"0.00245577807100389"	"15"	"0.0002479"	"0.005892"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25995"	"1115.51262"	"1115.51281"	"-0.17"	"-0.00009"	"5/58"	"5"	"58"	"379084.774414063"	"HCD"	"MS2"	"51.241"	"21.7"	"100.000"	"93.0746"	"32595"	"32595"	"32588"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.9"	""	"11.1"	""	"8.8"	""	"16.2"	""	"15.1"	"147.8"	""	"141"	"20"	"28.000"	"21.000"	"0.06937278295616"	"14"	"0.002871"	"0.02697"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25995"	"1115.51262"	"1115.51281"	"-0.17"	"-0.00009"	"4/58"	"4"	"58"	"414109.221008301"	"HCD"	"MS2"	"28.7307"	"13.0"	"100.000"	"87.8619"	"30591"	"30591"	"30577"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.0"	""	"11.3"	""	"15.2"	""	"22.4"	""	"27.3"	"32.3"	""	"141"	"24"	"28.000"	"21.000"	"0.0312024802515652"	"14"	"0.002973"	"0.02996"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25995"	"1115.51262"	"1115.51281"	"-0.17"	"-0.00009"	"6/58"	"6"	"58"	"465692.204101563"	"HCD"	"MS2"	"12.77822"	"14.2"	"100.000"	"83.0063"	"28686"	"28686"	"28673"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.8"	""	"20.4"	""	"16.3"	""	"28.3"	""	"24.3"	"32.0"	""	"141"	"29"	"28.000"	"21.000"	"0.00809448303155303"	"14"	"0.001134"	"0.01396"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25995"	"1115.51262"	"1115.51281"	"-0.17"	"-0.00009"	"4/58"	"4"	"58"	"459944.918762207"	"HCD"	"MS2"	"14.90112"	"15.3"	"100.000"	"82.7871"	"28603"	"28603"	"28587"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.0"	""	"17.9"	""	"17.5"	""	"25.3"	""	"30.7"	"33.3"	""	"141"	"25"	"28.000"	"21.000"	"0.0237787552604503"	"14"	"0.003449"	"0.03361"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25995"	"1115.51262"	"1115.51281"	"-0.17"	"-0.00009"	"4/58"	"4"	"58"	"374136.24206543"	"HCD"	"MS2"	"59.60395"	"18.3"	"100.000"	"78.8334"	"27010"	"27010"	"26985"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.4"	""	"20.7"	""	"27.3"	""	"27.8"	""	"31.5"	"35.6"	""	"141"	"13"	"28.000"	"21.000"	"0.346887872655423"	"13"	"0.00379"	"0.03899"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26001"	"1115.51274"	"1115.51281"	"-0.06"	"-0.00003"	"5/58"	"5"	"58"	"331400.90637207"	"HCD"	"MS2"	"52.43277"	"24.6"	"100.000"	"93.5467"	"32788"	"32788"	"32781"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.6"	""	"11.6"	""	"12.7"	""	"17.6"	""	"16.2"	"175.0"	""	"141"	"22"	"28.000"	"21.000"	"0.0445850355220235"	"14"	"0.001886"	"0.02169"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26001"	"1115.51274"	"1115.51281"	"-0.06"	"-0.00003"	"5/58"	"5"	"58"	"285864.781005859"	"HCD"	"MS2"	"16.39696"	"11.5"	"100.000"	"81.0771"	"27916"	"27916"	"27899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.5"	""	"13.0"	""	"15.1"	""	"17.7"	""	"25.9"	"26.0"	""	"141"	"22"	"28.000"	"21.000"	"0.0436705957929131"	"14"	"0.001886"	"0.02198"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26001"	"1115.51274"	"1115.51281"	"-0.06"	"-0.00003"	"5/58"	"5"	"58"	"174191.515441895"	"HCD"	"MS2"	"20.39334"	"5.5"	"100.000"	"95.8735"	"33612"	"33612"	"33606"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.3"	""	"7.9"	"2.0"	"4.5"	""	"8.9"	""	"11.4"	"12.7"	""	"141"	"21"	"28.000"	"21.000"	"0.0533567190989787"	"14"	"0.001546"	"0.01954"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26001"	"1115.51274"	"1115.51281"	"-0.06"	"-0.00003"	"4/58"	"4"	"58"	"409884.682006836"	"HCD"	"MS2"	"8.613789"	"14.3"	"100.000"	"84.4126"	"29240"	"29240"	"29223"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.9"	""	"16.7"	""	"22.9"	""	"19.3"	""	"30.8"	"32.4"	""	"141"	"23"	"28.000"	"21.000"	"0.0316365499902858"	"14"	"0.003449"	"0.03392"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26001"	"1115.51274"	"1115.51281"	"-0.06"	"-0.00003"	"5/58"	"5"	"58"	"707630.305847168"	"HCD"	"MS2"	"53.01303"	"21.1"	"100.000"	"86.0360"	"29875"	"29875"	"29860"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.5"	""	"22.4"	""	"29.7"	""	"32.2"	""	"29.4"	"51.6"	""	"141"	"22"	"28.000"	"21.000"	"0.0410382768528464"	"14"	"0.003581"	"0.03713"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26007"	"1115.51286"	"1115.51281"	"0.05"	"0.00003"	"5/58"	"5"	"58"	"144945.296936035"	"HCD"	"MS2"	"35.8975"	"6.2"	"100.000"	"97.2956"	"34127"	"34127"	"34121"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.9"	""	"8.0"	""	"5.5"	""	"9.2"	""	"13.4"	"13.9"	""	"141"	"24"	"28.000"	"21.000"	"0.0291198488903064"	"14"	"0.001036"	"0.01347"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26007"	"1115.51286"	"1115.51281"	"0.05"	"0.00003"	"5/58"	"5"	"58"	"347549.801208496"	"HCD"	"MS2"	"54.13031"	"23.2"	"100.000"	"93.4062"	"32720"	"32720"	"32712"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.4"	""	"7.7"	""	"7.8"	""	"9.2"	""	"17.3"	"176.1"	""	"141"	"23"	"28.000"	"21.000"	"0.0396450634259196"	"14"	"0.003111"	"0.03094"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26007"	"1115.51286"	"1115.51281"	"0.05"	"0.00003"	"5/58"	"5"	"58"	"338991.385681152"	"HCD"	"MS2"	"26.29621"	"12.7"	"100.000"	"90.2950"	"31532"	"31532"	"31523"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.6"	""	"14.4"	""	"14.0"	""	"21.8"	""	"30.6"	"27.0"	""	"141"	"39"	"28.000"	"21.000"	"0.000839825615659299"	"15"	"0.0006732"	"0.008335"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26007"	"1115.51286"	"1115.51281"	"0.05"	"0.00003"	"5/58"	"5"	"58"	"594947.806884766"	"HCD"	"MS2"	"12.97668"	"17.8"	"100.000"	"87.9056"	"30614"	"30614"	"30603"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.5"	""	"20.3"	""	"12.0"	""	"32.8"	""	"39.3"	"42.2"	""	"141"	"37"	"28.000"	"21.000"	"0.00157829840269068"	"15"	"0.001211"	"0.01426"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26013"	"1115.51299"	"1115.51281"	"0.16"	"0.00009"	"5/58"	"5"	"58"	"305775.87701416"	"HCD"	"MS2"	"38.77683"	"14.2"	"100.000"	"80.7930"	"27802"	"27802"	"27783"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.1"	""	"14.0"	""	"17.9"	""	"23.0"	""	"32.5"	"34.2"	""	"141"	"23"	"28.000"	"21.000"	"0.036828931324438"	"14"	"0.001728"	"0.02005"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26019"	"1115.51311"	"1115.51281"	"0.27"	"0.00015"	"5/58"	"5"	"58"	"203811.877319336"	"HCD"	"MS2"	"32.56693"	"7.9"	"100.000"	"94.6181"	"33156"	"33156"	"33146"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.0"	""	"8.2"	""	"6.8"	""	"11.0"	""	"9.4"	"35.8"	""	"141"	"19"	"28.000"	"21.000"	"0.0899889360211998"	"14"	"0.002795"	"0.02648"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26019"	"1115.51311"	"1115.51281"	"0.27"	"0.00015"	"5/58"	"5"	"58"	"331126.44909668"	"HCD"	"MS2"	"44.41205"	"16.2"	"100.000"	"92.8126"	"32496"	"32496"	"32487"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.6"	""	"14.7"	""	"7.9"	""	"13.3"	""	"14.2"	"96.4"	""	"141"	"23"	"28.000"	"21.000"	"0.0327483269032039"	"14"	"0.003111"	"0.03082"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26019"	"1115.51311"	"1115.51281"	"0.27"	"0.00015"	"5/58"	"5"	"58"	"378837.796142578"	"HCD"	"MS2"	"54.09612"	"17.8"	"100.000"	"92.9315"	"32556"	"32556"	"32545"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.4"	""	"5.9"	""	"10.2"	""	"15.9"	""	"19.6"	"109.2"	""	"141"	"22"	"28.000"	"21.000"	"0.0495665985518103"	"14"	"0.002973"	"0.03016"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26019"	"1115.51311"	"1115.51281"	"0.27"	"0.00015"	"5/58"	"5"	"58"	"429393.933349609"	"HCD"	"MS2"	"9.452682"	"13.6"	"100.000"	"87.5677"	"30476"	"30476"	"30461"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.8"	""	"13.7"	""	"16.9"	""	"21.8"	""	"31.3"	"34.0"	""	"141"	"37"	"28.000"	"21.000"	"0.00156382847595916"	"15"	"0.000936"	"0.0118"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26025"	"1115.51323"	"1115.51281"	"0.38"	"0.00021"	"4/58"	"4"	"58"	"248242.038879395"	"HCD"	"MS2"	"35.6883"	"11.4"	"100.000"	"79.8017"	"27400"	"27400"	"27373"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.5"	""	"11.1"	""	"11.5"	""	"21.5"	""	"25.4"	"25.5"	""	"141"	"25"	"28.000"	"21.000"	"0.0230244421681497"	"14"	"0.002379"	"0.02484"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26025"	"1115.51323"	"1115.51281"	"0.38"	"0.00021"	"4/58"	"4"	"58"	"232319.711486816"	"HCD"	"MS2"	"50.42402"	"8.6"	"100.000"	"95.1737"	"33379"	"33379"	"33368"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.3"	""	"6.7"	""	"12.6"	""	"17.3"	""	"13.8"	"23.1"	""	"141"	"23"	"28.000"	"21.000"	"0.0372553902501502"	"14"	"0.001211"	"0.01451"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26025"	"1115.51323"	"1115.51281"	"0.38"	"0.00021"	"5/58"	"5"	"58"	"447895.272644043"	"HCD"	"MS2"	"7.658134"	"16.2"	"100.000"	"87.3358"	"30391"	"30391"	"30377"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.9"	""	"19.8"	""	"16.6"	""	"29.2"	""	"34.1"	"32.5"	""	"141"	"40"	"28.000"	"21.000"	"0.000765930064650032"	"15"	"0.0003538"	"0.007418"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26031"	"1115.51335"	"1115.51281"	"0.49"	"0.00027"	"5/58"	"5"	"58"	"245417.760009766"	"HCD"	"MS2"	"19.00521"	"13.2"	"100.000"	"79.5273"	"27294"	"27294"	"27281"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.6"	""	"14.1"	""	"19.0"	""	"19.6"	"1.2"	"26.3"	"28.0"	""	"137"	"21"	"28.000"	"21.000"	"0.0504301861783894"	"14"	"0.002937"	"0.02738"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26044"	"1115.51360"	"1115.51281"	"0.71"	"0.00039"	"5/58"	"5"	"58"	"3537434.73205566"	"HCD"	"MS2"	"5.526216"	"68.2"	"100.000"	"73.9365"	"25045"	"25045"	"25028"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.0"	""	"42.8"	""	"56.1"	""	"177.0"	""	"172.5"	"154.5"	""	"137"	"37"	"28.000"	"21.000"	"0.00125513537932428"	"15"	"0.001546"	"0.01919"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAWEIPR"	"[K].dAWEIPR.[E]"	"N-Term(TMT6plex)"	"2"	"4"	"Q07014; F1LM93"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3;Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"P50545; Q07014; Q9WUD9; F1LM93"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4; Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3; Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4; Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"558.30548"	"1115.60369"	"1115.60467"	"-0.89"	"-0.00049"	"5/54"	"5"	"54"	"3545857.17834473"	"HCD"	"MS2"	"1.223441"	"147.5"	"100.000"	"65.0453"	"21424"	"21424"	"21405"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"181.4"	""	"181.7"	""	"158.7"	""	"258.2"	""	"308.4"	"316.1"	""	"503"	"30"	"34.000"	"27.000"	"0.0249768686177865"	"19"	"0.003922"	"0.04"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAWEIPR"	"[K].dAWEIPR.[E]"	"N-Term(TMT6plex)"	"2"	"4"	"Q07014; F1LM93"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3;Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"P50545; Q07014; Q9WUD9; F1LM93"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4; Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3; Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4; Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"558.30554"	"1115.60381"	"1115.60467"	"-0.78"	"-0.00043"	"5/54"	"5"	"54"	"4760629.17736816"	"HCD"	"MS2"	"0"	"188.9"	"100.000"	"65.3537"	"21549"	"21549"	"21533"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"228.4"	""	"214.1"	""	"200.3"	""	"323.7"	""	"407.3"	"424.6"	""	"503"	"27"	"34.000"	"27.000"	"0.0480328094529409"	"18"	"0.00599"	"0.0694"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAWEIPR"	"[K].dAWEIPR.[E]"	"N-Term(TMT6plex)"	"2"	"4"	"Q07014; F1LM93"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3;Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"P50545; Q07014; Q9WUD9; F1LM93"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4; Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3; Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4; Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"558.30566"	"1115.60405"	"1115.60467"	"-0.56"	"-0.00031"	"5/54"	"5"	"54"	"5762556.2565918"	"HCD"	"MS2"	"0.486789"	"227.6"	"100.000"	"65.3925"	"21550"	"21550"	"21533"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"267.8"	""	"265.3"	""	"247.0"	""	"377.0"	""	"506.1"	"506.4"	""	"502"	"30"	"33.000"	"27.000"	"0.0247556150893434"	"19"	"0.004606"	"0.04994"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAWEIPR"	"[K].dAWEIPR.[E]"	"N-Term(TMT6plex)"	"2"	"4"	"Q07014; F1LM93"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3;Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"P50545; Q07014; Q9WUD9; F1LM93"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4; Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3; Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4; Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"558.30597"	"1115.60466"	"1115.60467"	"-0.01"	"-0.00001"	"5/54"	"5"	"54"	"2066169.39141846"	"HCD"	"MS2"	"1.777396"	"92.2"	"100.000"	"65.0935"	"21428"	"21428"	"21415"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"119.6"	""	"110.2"	""	"88.2"	""	"160.8"	""	"193.1"	"205.0"	""	"504"	"30"	"34.000"	"27.000"	"0.0259657302351287"	"22"	"0.003922"	"0.03984"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLIIEQR"	"[K].dLIIEQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"558.33423"	"1115.66118"	"1115.66219"	"-0.90"	"-0.00050"	"5/58"	"5"	"58"	"1768325.06488037"	"HCD"	"MS2"	"22.7884"	"76.7"	"100.000"	"54.1243"	"17020"	"17020"	"17002"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"104.5"	""	"85.0"	""	"89.8"	""	"144.1"	""	"150.3"	"154.8"	""	"527"	"38"	"34.000"	"27.000"	"0.00381751383409044"	""	"0.002379"	"0.0245"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVVIVDDR"	"[R].aVVIVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"558.33435"	"1115.66142"	"1115.66219"	"-0.69"	"-0.00038"	"7/58"	"7"	"58"	"1106490.93078613"	"HCD"	"MS2"	"28.53009"	"58.0"	"100.000"	"48.9867"	"14925"	"14925"	"14906"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"80.3"	""	"79.6"	""	"82.5"	""	"97.3"	""	"101.0"	"113.0"	""	"527"	"26"	"34.000"	"27.000"	"0.0680425560232216"	""	"0.0006732"	"0.008886"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVVIVDDR"	"[R].aVVIVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"558.33441"	"1115.66155"	"1115.66219"	"-0.58"	"-0.00032"	"11/58"	"11"	"58"	"4596228.52264404"	"HCD"	"MS2"	"0"	"169.8"	"100.000"	"49.2886"	"15048"	"15048"	"15036"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"273.7"	""	"245.1"	""	"208.3"	""	"252.1"	""	"311.3"	"320.3"	""	"527"	"44"	"34.000"	"27.000"	"0.00117430421452742"	"22"	"0"	"0.001925"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIELQIR"	"[K].dIELQIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"558.33447"	"1115.66167"	"1115.66219"	"-0.47"	"-0.00026"	"5/56"	"5"	"56"	"991177.257995605"	"HCD"	"MS2"	"26.86889"	"48.5"	"100.000"	"68.4840"	"22810"	"22810"	"22789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.9"	""	"63.8"	""	"61.4"	""	"80.9"	""	"90.0"	"87.1"	""	"527"	"31"	"34.000"	"27.000"	"0.0234844622198242"	"22"	"0.004069"	"0.04478"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVVIVDDR"	"[R].aVVIVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"558.33453"	"1115.66179"	"1115.66219"	"-0.36"	"-0.00020"	"7/58"	"7"	"58"	"672113.841125488"	"HCD"	"MS2"	"19.66311"	"38.9"	"100.000"	"49.9525"	"15307"	"15307"	"15278"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.3"	""	"49.3"	""	"49.2"	""	"65.7"	""	"71.9"	"81.8"	""	"527"	"23"	"34.000"	"27.000"	"0.144138706222561"	"24"	"0.005617"	"0.06318"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIELQIR"	"[K].dIELQIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"558.33459"	"1115.66191"	"1115.66219"	"-0.25"	"-0.00014"	"5/56"	"5"	"56"	"904453.998840332"	"HCD"	"MS2"	"34.61005"	"44.5"	"100.000"	"68.2774"	"22740"	"22740"	"22719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.6"	""	"44.6"	""	"63.1"	""	"74.8"	""	"86.7"	"84.2"	""	"527"	"26"	"34.000"	"27.000"	"0.070271725810141"	"22"	"0.003967"	"0.04235"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVVIVDDR"	"[R].aVVIVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"558.33466"	"1115.66203"	"1115.66219"	"-0.14"	"-0.00008"	"7/58"	"7"	"58"	"700467.412353516"	"HCD"	"MS2"	"18.80958"	"39.9"	"100.000"	"49.6133"	"15180"	"15180"	"15158"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.6"	""	"50.6"	""	"51.5"	""	"69.0"	""	"74.3"	"80.8"	""	"527"	"23"	"34.000"	"27.000"	"0.14547240525048"	"23"	"0.007602"	"0.08967"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVVIVDDR"	"[R].aVVIVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"558.33466"	"1115.66203"	"1115.66219"	"-0.14"	"-0.00008"	"11/58"	"11"	"58"	"4721306.16552734"	"HCD"	"MS2"	"1.026096"	"171.5"	"100.000"	"49.6163"	"15170"	"15170"	"15153"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"287.0"	""	"247.2"	""	"213.4"	""	"261.1"	""	"283.5"	"331.9"	""	"527"	"48"	"34.000"	"27.000"	"0.00043629538537422"	"24"	"0"	"0.001518"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLIIEQR"	"[K].dLIIEQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"558.33502"	"1115.66277"	"1115.66219"	"0.52"	"0.00029"	"5/58"	"5"	"58"	"1779191.73382568"	"HCD"	"MS2"	"3.623808"	"76.8"	"100.000"	"54.2885"	"17076"	"17076"	"17056"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"110.5"	""	"86.6"	""	"97.3"	""	"141.3"	""	"141.7"	"152.1"	""	"588"	"39"	"34.000"	"27.000"	"0.00391153598885559"	""	"0.0023"	"0.02343"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADMYTR"	"[K].mADMYTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"558.77234"	"1116.53740"	"1116.53792"	"-0.46"	"-0.00026"	"5/54"	"5"	"54"	"2082900.17913818"	"HCD"	"MS2"	"36.64517"	"119.1"	"100.000"	"44.4163"	"13052"	"13052"	"13033"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"192.6"	""	"176.9"	""	"183.7"	""	"141.1"	"0.5"	"202.2"	"230.4"	""	"235"	"25"	"30.000"	"23.000"	"0.0345969541971355"	"15"	"0.001812"	"0.02079"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADMYTR"	"[K].mADMYTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"558.77234"	"1116.53740"	"1116.53792"	"-0.46"	"-0.00026"	"5/54"	"5"	"54"	"2461726.54272461"	"HCD"	"MS2"	"19.48474"	"135.7"	"100.000"	"44.3119"	"13021"	"13021"	"13005"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"208.5"	""	"210.1"	""	"216.3"	""	"160.1"	""	"222.3"	"268.8"	""	"235"	"33"	"30.000"	"23.000"	"0.00615230512988256"	"17"	"0.001812"	"0.02051"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGAQLDR"	"[K].dLGAQLDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVC7"	"Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Acap2 PE=1 SV=1"	"Q5FVC7"	"Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Acap2 PE=1 SV=1"	"0"	"2"	"2"	"0.1591"	"0.0000"	"1"	"1"	"1"	"558.81378"	"1116.62029"	"1116.62105"	"-0.69"	"-0.00038"	"7/74"	"7"	"74"	"2759715.41094971"	"HCD"	"MS2"	"25.41016"	"133.8"	"100.000"	"45.9401"	"13672"	"13672"	"13645"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"200.2"	""	"175.0"	""	"186.8"	""	"210.6"	""	"238.3"	"257.4"	""	"521"	"44"	"34.000"	"27.000"	"0.00111894239172253"	""	"0"	"0.002314"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGAQLDR"	"[K].dLGAQLDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVC7"	"Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Acap2 PE=1 SV=1"	"Q5FVC7"	"Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Acap2 PE=1 SV=1"	"0"	"2"	"2"	"0.1190"	"0.0000"	"1"	"1"	"1"	"558.81427"	"1116.62126"	"1116.62105"	"0.19"	"0.00011"	"7/74"	"7"	"74"	"2942772.17510986"	"HCD"	"MS2"	"40.72985"	"145.2"	"100.000"	"45.7813"	"13619"	"13619"	"13596"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"224.0"	""	"187.2"	""	"201.1"	""	"226.2"	""	"264.0"	"275.4"	""	"529"	"42"	"34.000"	"27.000"	"0.0017596474981536"	""	"0"	"0.002044"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEPEPFR"	"[K].iEPEPFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"558.81531"	"1116.62334"	"1116.62508"	"-1.56"	"-0.00087"	"8/52"	"8"	"52"	"1644985.99316406"	"HCD"	"MS2"	"43.64104"	"80.6"	"100.000"	"58.1876"	"18659"	"18659"	"18639"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"148.5"	""	"108.6"	""	"92.3"	""	"120.0"	"1.8"	"131.8"	"159.3"	""	"483"	"24"	"33.000"	"26.000"	"0.100673956108086"	"20"	"0.008522"	"0.1055"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEPEPFR"	"[K].iEPEPFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"558.81580"	"1116.62432"	"1116.62508"	"-0.68"	"-0.00038"	"8/52"	"8"	"52"	"1726608.51574707"	"HCD"	"MS2"	"49.72112"	"87.7"	"100.000"	"58.0034"	"18599"	"18599"	"18575"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"151.3"	""	"115.8"	""	"108.6"	""	"136.1"	"2.4"	"138.8"	"176.6"	""	"638"	"22"	"35.000"	"28.000"	"0.191774422257166"	"24"	"0.007018"	"0.08134"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENQLLR"	"[R].lEnqLLR.[N]"	"N-Term(TMT6plex); N3(Deamidated); Q4(Deamidated)"	"1"	"1"	"Q3ZU82"	"Golgin subfamily A member 5 OS=Rattus norvegicus OX=10116 GN=Golga5 PE=1 SV=1"	"Q3ZU82"	"Golgin subfamily A member 5 OS=Rattus norvegicus OX=10116 GN=Golga5 PE=1 SV=1"	"0"	"2"	"2"	"0.3590"	"0.0000"	"1"	"1"	"3"	"558.82629"	"1116.64531"	"1116.64621"	"-0.80"	"-0.00045"	"6/56"	"6"	"56"	"1480544.51165771"	"HCD"	"MS2"	"6.008156"	"73.2"	"100.000"	"72.9692"	"24639"	"24639"	"24623"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.3"	""	"116.4"	""	"96.4"	""	"92.5"	"3.8"	"155.5"	"152.6"	""	"681"	"39"	"35.000"	"28.000"	"0.00387362090822879"	""	"0.001886"	"0.0209"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENQLLR"	"[R].lEnqLLR.[N]"	"N-Term(TMT6plex); N3(Deamidated); Q4(Deamidated)"	"1"	"1"	"Q3ZU82"	"Golgin subfamily A member 5 OS=Rattus norvegicus OX=10116 GN=Golga5 PE=1 SV=1"	"Q3ZU82"	"Golgin subfamily A member 5 OS=Rattus norvegicus OX=10116 GN=Golga5 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"3"	"558.82660"	"1116.64592"	"1116.64621"	"-0.25"	"-0.00014"	"9/56"	"9"	"56"	"1406795.74121094"	"HCD"	"MS2"	"5.144"	"65.4"	"100.000"	"72.8778"	"24615"	"24615"	"24593"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.8"	""	"96.1"	""	"93.6"	""	"100.6"	"0.6"	"133.2"	"126.1"	""	"676"	"27"	"35.000"	"28.000"	"0.0737762710202934"	""	"0.003581"	"0.03707"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ILENIER"	"[K].iLEnIER.[T]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q99PE7"	"ATP-binding cassette sub-family G member 5 OS=Rattus norvegicus OX=10116 GN=Abcg5 PE=1 SV=3"	"Q99PE7"	"ATP-binding cassette sub-family G member 5 OS=Rattus norvegicus OX=10116 GN=Abcg5 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"558.82666"	"1116.64604"	"1116.64621"	"-0.14"	"-0.00008"	"6/60"	"6"	"60"	"304284.418884277"	"HCD"	"MS2"	"35.96333"	"17.5"	"100.000"	"79.4951"	"27276"	"27276"	"27258"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.0"	""	"20.1"	""	"24.0"	""	"30.1"	"1.2"	"32.3"	"37.9"	""	"676"	"11"	"35.000"	"28.000"	"2.67865449702399"	"18"	"0.007627"	"0.09257"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALLQASR"	"[K].eALLQASR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"558.83154"	"1116.65581"	"1116.65744"	"-1.46"	"-0.00081"	"6/74"	"6"	"74"	"14332784.2024536"	"HCD"	"MS2"	"1.288835"	"569.9"	"100.000"	"43.7222"	"12785"	"12785"	"12776"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"700.8"	""	"623.9"	""	"674.5"	""	"1025.3"	""	"1161.1"	"1233.4"	""	"729"	"35"	"35.000"	"28.000"	"0.0109571481230799"	"24"	"0.0008629"	"0.009754"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALLQASR"	"[K].eALLQASR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"558.83185"	"1116.65642"	"1116.65744"	"-0.91"	"-0.00051"	"5/74"	"5"	"74"	"7719965.24072266"	"HCD"	"MS2"	"31.60274"	"303.4"	"100.000"	"43.4222"	"12664"	"12664"	"12649"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"407.6"	""	"357.4"	""	"363.0"	""	"541.4"	"1.3"	"601.1"	"607.1"	""	"729"	"19"	"35.000"	"28.000"	"0.491696970704658"	"20"	"0.001311"	"0.01572"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALLQASR"	"[K].eALLQASR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"558.83203"	"1116.65679"	"1116.65744"	"-0.58"	"-0.00033"	"6/74"	"6"	"74"	"17516236.5142822"	"HCD"	"MS2"	"2.990957"	"593.3"	"88.768"	"43.7964"	"12805"	"12805"	"12796"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"723.4"	""	"659.6"	""	"672.7"	""	"1108.1"	""	"1187.4"	"1290.2"	""	"729"	"35"	"35.000"	"28.000"	"0.0107819554405804"	"24"	"0.0004639"	"0.00796"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALLQASR"	"[K].eALLQASR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"558.83228"	"1116.65727"	"1116.65744"	"-0.15"	"-0.00008"	"6/74"	"6"	"74"	"1657699.78088379"	"HCD"	"MS2"	"18.29396"	"96.3"	"100.000"	"44.1083"	"12931"	"12931"	"12907"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"128.2"	""	"110.6"	""	"109.4"	""	"161.1"	""	"204.4"	"203.9"	""	"727"	"20"	"35.000"	"28.000"	"0.347940044915676"	"20"	"0.000936"	"0.01229"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALLQASR"	"[K].eALLQASR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"558.83228"	"1116.65727"	"1116.65744"	"-0.15"	"-0.00008"	"6/74"	"6"	"74"	"7208706.39123535"	"HCD"	"MS2"	"31.51364"	"298.1"	"100.000"	"43.5330"	"12699"	"12699"	"12682"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"408.5"	""	"362.2"	""	"367.5"	""	"518.7"	""	"563.0"	"613.7"	""	"727"	"18"	"35.000"	"28.000"	"0.536419324845788"	"21"	"0.001134"	"0.01375"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALLQASR"	"[K].eALLQASR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"558.83331"	"1116.65935"	"1116.65744"	"1.71"	"0.00096"	"6/74"	"6"	"74"	"1397796.24902344"	"HCD"	"MS2"	"38.5052"	"86.7"	"100.000"	"44.0642"	"12924"	"12924"	"12897"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"101.5"	""	"94.9"	""	"103.4"	""	"160.7"	"0.6"	"175.2"	"187.0"	""	"723"	"28"	"35.000"	"28.000"	"0.0593073203011634"	"20"	"0.0003538"	"0.007191"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATGPGQK"	"[K].aTGPGQk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"558.84210"	"1116.67693"	"1116.67773"	"-0.72"	"-0.00040"	"6/50"	"6"	"50"	"2534822.89849854"	"HCD"	"MS2"	"6.593212"	"183.5"	"100.000"	"23.5810"	"4626"	"4626"	"4604"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"282.9"	""	"240.5"	""	"260.9"	""	"321.7"	""	"330.8"	"303.0"	""	"776"	"31"	"35.000"	"28.000"	"0.0293651163268138"	"21"	"0.006685"	"0.07486"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATGPGQK"	"[K].aTGPGQk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"558.84229"	"1116.67729"	"1116.67773"	"-0.39"	"-0.00022"	"10/50"	"10"	"50"	"2581633.42071533"	"HCD"	"MS2"	"0"	"178.2"	"100.000"	"23.6843"	"4651"	"4651"	"4629"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"271.9"	""	"235.7"	""	"255.0"	""	"295.1"	""	"344.3"	"286.9"	""	"773"	"34"	"35.000"	"28.000"	"0.0167166595695031"	"21"	"0.005119"	"0.05826"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAQEGAER"	"[K].aGAQEGAER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"559.29382"	"1117.58037"	"1117.57992"	"0.41"	"0.00023"	"6/80"	"6"	"80"	"291678.800109863"	"HCD"	"MS2"	"33.50691"	"18.4"	"100.000"	"19.2445"	"2884"	"2884"	"2864"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.7"	""	"25.9"	""	"19.2"	""	"32.9"	""	"39.7"	"35.1"	""	"487"	"14"	"33.000"	"26.000"	"1.00114957088951"	"14"	"0.005617"	"0.06386"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NASNDIVR"	"[K].nASNDIVR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"559.31122"	"1117.61516"	"1117.61630"	"-1.02"	"-0.00057"	"7/74"	"7"	"74"	"2780299.06103516"	"HCD"	"MS2"	"19.52872"	"139.5"	"100.000"	"26.0943"	"5633"	"5633"	"5622"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"203.3"	""	"157.0"	""	"177.3"	""	"265.0"	"1.2"	"266.0"	"252.1"	""	"652"	"39"	"35.000"	"28.000"	"0.00408524023030901"	"22"	"0.0008629"	"0.01082"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NASNDIVR"	"[K].nASNDIVR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"559.31219"	"1117.61711"	"1117.61630"	"0.73"	"0.00041"	"7/74"	"7"	"74"	"2588352.85595703"	"HCD"	"MS2"	"33.32824"	"133.0"	"100.000"	"26.1611"	"5645"	"5645"	"5626"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"177.4"	""	"151.8"	""	"157.2"	""	"279.0"	"4.9"	"247.2"	"243.6"	""	"634"	"39"	"35.000"	"28.000"	"0.00430585362568128"	"23"	"0.0008629"	"0.009573"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVWAELR"	"[R].dVWAELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"0"	"2"	"2"	"0.2593"	"0.0000"	"1"	"1"	"3"	"559.31342"	"1117.61955"	"1117.62032"	"-0.69"	"-0.00039"	"7/56"	"7"	"56"	"1375734.29876709"	"HCD"	"MS2"	"21.72875"	"58.4"	"100.000"	"78.0438"	"26699"	"26699"	"26683"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"111.2"	""	"86.3"	""	"73.6"	""	"90.8"	""	"92.2"	"101.6"	""	"769"	"27"	"35.000"	"28.000"	"0.0706148993017438"	""	"0.009594"	"0.1258"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVWAELR"	"[R].dVWAELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"3"	"559.31342"	"1117.61955"	"1117.62032"	"-0.69"	"-0.00039"	"7/56"	"7"	"56"	"1430792.91741943"	"HCD"	"MS2"	"20.69506"	"58.5"	"100.000"	"78.1047"	"26715"	"26715"	"26704"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"97.0"	""	"83.6"	""	"85.9"	""	"91.6"	""	"100.9"	"97.4"	""	"769"	"30"	"35.000"	"28.000"	"0.0368041120412867"	""	"0.001812"	"0.02083"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGWEELR"	"[R].vGWEELR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"I6L9G5"	"Reticulocalbin-3 OS=Rattus norvegicus OX=10116 GN=Rcn3 PE=1 SV=1"	"I6L9G5"	"Reticulocalbin-3 OS=Rattus norvegicus OX=10116 GN=Rcn3 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"559.31366"	"1117.62004"	"1117.62032"	"-0.25"	"-0.00014"	"10/50"	"10"	"50"	"1289199.11669922"	"HCD"	"MS2"	"16.5483"	"65.7"	"100.000"	"67.3080"	"22331"	"22331"	"22306"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.2"	""	"100.1"	""	"109.5"	""	"95.8"	"1.7"	"120.3"	"107.8"	""	"772"	"21"	"35.000"	"28.000"	"0.304500005400762"	"23"	"0.004069"	"0.04432"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGWEELR"	"[R].vGWEELR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"I6L9G5"	"Reticulocalbin-3 OS=Rattus norvegicus OX=10116 GN=Rcn3 PE=1 SV=1"	"I6L9G5"	"Reticulocalbin-3 OS=Rattus norvegicus OX=10116 GN=Rcn3 PE=1 SV=1"	"0"	"2"	"2"	"0.3448"	"0.0000"	"1"	"1"	"1"	"559.31366"	"1117.62004"	"1117.62032"	"-0.25"	"-0.00014"	"7/50"	"7"	"50"	"1517891.80938721"	"HCD"	"MS2"	"19.42494"	"71.1"	"100.000"	"67.2165"	"22309"	"22309"	"22284"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"99.7"	""	"107.1"	""	"113.3"	""	"112.3"	""	"121.0"	"119.7"	""	"772"	"29"	"35.000"	"28.000"	"0.0489313620221129"	""	"0.003922"	"0.03955"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWGEDLR"	"[K].iWGEDLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"559.31372"	"1117.62016"	"1117.62032"	"-0.14"	"-0.00008"	"9/50"	"9"	"50"	"2353695.03234863"	"HCD"	"MS2"	"16.25152"	"110.9"	"100.000"	"72.7509"	"24563"	"24563"	"24545"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"154.2"	""	"162.6"	""	"166.5"	""	"145.4"	""	"212.2"	"212.7"	""	"772"	"15"	"35.000"	"28.000"	"1.36328703539695"	"24"	"0.008777"	"0.1146"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APTLEAMR"	"[R].aPTLEAMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"559.31512"	"1117.62297"	"1117.62370"	"-0.65"	"-0.00036"	"11/60"	"11"	"60"	"2480448.1920166"	"HCD"	"MS2"	"0"	"99.8"	"100.000"	"50.1430"	"15396"	"15396"	"15378"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"150.7"	""	"143.4"	""	"149.3"	""	"118.8"	"4.6"	"179.0"	"199.5"	""	"753"	"25"	"35.000"	"28.000"	"0.113701182273136"	"21"	"0.0008629"	"0.01008"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APTLEAMR"	"[R].aPTLEAMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"559.31519"	"1117.62309"	"1117.62370"	"-0.54"	"-0.00030"	"9/60"	"9"	"60"	"1864005.94195557"	"HCD"	"MS2"	"6.306782"	"79.7"	"100.000"	"50.5238"	"15540"	"15540"	"15518"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"111.6"	""	"107.7"	""	"118.7"	""	"95.1"	"6.2"	"159.4"	"157.4"	""	"753"	"18"	"35.000"	"28.000"	"0.669522197879654"	"19"	"0.009594"	"0.127"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APTLEAMR"	"[R].aPTLEAMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"559.31531"	"1117.62334"	"1117.62370"	"-0.32"	"-0.00018"	"9/60"	"9"	"60"	"1811251.34381104"	"HCD"	"MS2"	"21.53357"	"72.6"	"100.000"	"50.2223"	"15417"	"15417"	"15390"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"115.1"	""	"111.7"	""	"118.1"	""	"76.4"	""	"133.3"	"137.4"	""	"772"	"26"	"35.000"	"28.000"	"0.0962913564599981"	"25"	"0.00413"	"0.04582"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APTLEAMR"	"[R].aPTLEAMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"559.31580"	"1117.62432"	"1117.62370"	"0.55"	"0.00031"	"10/60"	"10"	"60"	"1493954.2769165"	"HCD"	"MS2"	"15.99702"	"67.9"	"100.000"	"49.8508"	"15277"	"15277"	"15254"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"112.5"	""	"104.3"	""	"106.0"	""	"83.1"	"2.4"	"112.2"	"121.5"	""	"790"	"19"	"35.000"	"28.000"	"0.542746580129943"	"20"	"0.0008629"	"0.009967"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASEIAER"	"[R].lASEIAER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15800"	"Laminin subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Lamb2 PE=1 SV=1"	"P15800"	"Laminin subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Lamb2 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"559.32251"	"1117.63774"	"1117.64145"	"-3.32"	"-0.00186"	"7/64"	"7"	"64"	"2596000.89508057"	"HCD"	"MS2"	"41.30576"	"123.0"	"100.000"	"46.6136"	"13947"	"13947"	"13927"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"127.9"	""	"127.6"	""	"137.9"	""	"219.8"	""	"259.4"	"300.9"	""	"862"	"21"	"36.000"	"29.000"	"0.306533024384585"	"19"	"0.000936"	"0.01192"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHPSWLPPR"	"[M].sHPSWLPPR.[S]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.79016"	"1118.57305"	"1118.57415"	"-0.99"	"-0.00055"	"6/70"	"6"	"70"	"2134774.91241455"	"HCD"	"MS2"	"18.14518"	"41.4"	"100.000"	"50.5157"	"15547"	"15547"	"15529"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.6"	""	"47.0"	""	"62.5"	""	"64.2"	"1.4"	"72.5"	"80.4"	"NoQuanLabels"	"527"	"35"	"34.000"	"27.000"	"0.0076697396061055"	"15"	"0.004942"	"0.05553"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHPSWLPPR"	"[M].sHPSWLPPR.[S]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.79022"	"1118.57317"	"1118.57415"	"-0.88"	"-0.00049"	"6/70"	"6"	"70"	"1645683.60827637"	"HCD"	"MS2"	"28.03382"	"34.3"	"100.000"	"51.9277"	"16112"	"16112"	"16091"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.8"	""	"28.1"	""	"37.2"	""	"42.9"	"0.8"	"47.7"	"134.9"	"NoQuanLabels"	"527"	"25"	"34.000"	"27.000"	"0.0806827364777493"	"14"	"0.005001"	"0.05667"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHPSWLPPR"	"[M].sHPSWLPPR.[S]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.79034"	"1118.57341"	"1118.57415"	"-0.66"	"-0.00037"	"6/70"	"6"	"70"	"1698684.55334473"	"HCD"	"MS2"	"26.02553"	"35.9"	"100.000"	"51.6097"	"15993"	"15993"	"15973"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.1"	""	"37.9"	""	"39.0"	""	"46.7"	""	"50.4"	"128.5"	"NoQuanLabels"	"514"	"26"	"34.000"	"27.000"	"0.0613667499708687"	"14"	"0.005067"	"0.05731"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHPSWLPPR"	"[M].sHPSWLPPR.[S]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.79034"	"1118.57341"	"1118.57415"	"-0.66"	"-0.00037"	"6/70"	"6"	"70"	"2085708.99572754"	"HCD"	"MS2"	"19.83871"	"30.5"	"100.000"	"51.3007"	"15867"	"15867"	"15847"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.9"	""	"36.6"	""	"40.0"	""	"47.9"	""	"54.5"	"73.8"	"NoQuanLabels"	"514"	"27"	"34.000"	"27.000"	"0.0572707833362468"	"14"	"0.0001301"	"0.004247"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHPSWLPPR"	"[M].sHPSWLPPR.[S]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.79034"	"1118.57341"	"1118.57415"	"-0.66"	"-0.00037"	"6/70"	"6"	"70"	"3337074.36035156"	"HCD"	"MS2"	"39.69017"	"78.7"	"100.000"	"50.8242"	"15673"	"15673"	"15651"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"118.4"	""	"107.1"	""	"120.4"	""	"93.0"	"1.7"	"143.0"	"162.0"	"NoQuanLabels"	"514"	"25"	"34.000"	"27.000"	"0.0779710034337928"	"14"	"0.007476"	"0.08948"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHPSWLPPR"	"[M].sHPSWLPPR.[S]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.79077"	"1118.57427"	"1118.57415"	"0.10"	"0.00006"	"6/70"	"6"	"70"	"1134762.4151001"	"HCD"	"MS2"	"23.09328"	"25.6"	"100.000"	"51.9497"	"16132"	"16132"	"16111"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.5"	""	"27.7"	""	"40.4"	""	"34.1"	"0.0"	"48.4"	"60.6"	"NoQuanLabels"	"511"	"29"	"34.000"	"27.000"	"0.0344660016502167"	"14"	"0.00447"	"0.04864"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETELELR"	"[R].eTELELR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.3600"	"0.0000"	"1"	"1"	"1"	"559.81604"	"1118.62480"	"1118.62547"	"-0.60"	"-0.00033"	"5/56"	"5"	"56"	"1620775.96160889"	"HCD"	"MS2"	"20.24855"	"85.1"	"100.000"	"47.4688"	"14306"	"14306"	"14286"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"131.0"	""	"110.7"	""	"96.2"	""	"140.2"	""	"161.2"	"167.6"	""	"831"	"25"	"36.000"	"29.000"	"0.142092458364446"	""	"0.003922"	"0.04013"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALLDGTSR"	"[K].gALLDGTSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"559.82117"	"1118.63506"	"1118.63670"	"-1.47"	"-0.00082"	"7/70"	"7"	"70"	"5628151.05480957"	"HCD"	"MS2"	"33.55925"	"317.3"	"100.000"	"41.0934"	"11714"	"11714"	"11693"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"449.9"	""	"439.2"	""	"427.0"	""	"550.3"	""	"548.0"	"590.4"	""	"825"	"24"	"36.000"	"29.000"	"0.164977209276453"	"24"	"0"	"0.002861"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALLDGTSR"	"[K].gALLDGTSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"559.82178"	"1118.63628"	"1118.63670"	"-0.38"	"-0.00021"	"7/70"	"7"	"70"	"5597793.60089111"	"HCD"	"MS2"	"45.25726"	"336.1"	"100.000"	"41.2755"	"11778"	"11778"	"11763"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"464.4"	""	"429.5"	""	"435.1"	""	"599.2"	""	"623.6"	"633.7"	""	"823"	"27"	"36.000"	"29.000"	"0.0885869683839079"	"27"	"0.0008629"	"0.01028"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALLDGTSR"	"[K].gALLDGTSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"559.82214"	"1118.63701"	"1118.63670"	"0.27"	"0.00015"	"7/70"	"7"	"70"	"2934921.25244141"	"HCD"	"MS2"	"32.86267"	"158.9"	"100.000"	"40.7793"	"11588"	"11588"	"11562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"266.6"	""	"235.2"	""	"258.6"	""	"249.3"	""	"238.0"	"255.5"	""	"823"	"40"	"36.000"	"29.000"	"0.00458532200572997"	"29"	"0"	"0.001558"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLADGTTR"	"[R].gVLADGTTR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P41682"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2"	"P41682"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"559.82214"	"1118.63701"	"1118.63670"	"0.27"	"0.00015"	"7/70"	"7"	"70"	"4588564.76733398"	"HCD"	"MS2"	"41.10555"	"243.3"	"100.000"	"33.0071"	"8435"	"8435"	"8411"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"261.7"	""	"253.4"	""	"297.4"	""	"284.6"	""	"747.8"	"477.6"	""	"823"	"27"	"36.000"	"29.000"	"0.084405323658672"	"20"	"0"	"0.002953"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLADGTTR"	"[R].gVLADGTTR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P41682"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2"	"P41682"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"559.82214"	"1118.63701"	"1118.63670"	"0.27"	"0.00015"	"7/70"	"7"	"70"	"4712480.62744141"	"HCD"	"MS2"	"36.24147"	"265.4"	"100.000"	"33.0141"	"8431"	"8431"	"8413"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"301.0"	""	"266.2"	""	"352.9"	""	"338.1"	"1.4"	"773.3"	"495.8"	""	"823"	"35"	"36.000"	"29.000"	"0.0117589850859879"	"20"	"0"	"0.00193"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALLDGTSR"	"[K].gALLDGTSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"559.82318"	"1118.63909"	"1118.63670"	"2.13"	"0.00119"	"7/70"	"7"	"70"	"3196591.25805664"	"HCD"	"MS2"	"10.53059"	"167.8"	"100.000"	"40.9590"	"11651"	"11651"	"11630"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"292.4"	""	"255.4"	""	"267.8"	""	"241.3"	"1.3"	"265.1"	"261.4"	""	"799"	"40"	"36.000"	"29.000"	"0.00427087424249452"	"29"	"0"	"0.0006077"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIDEPR"	"[R].lFIDEPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"559.82361"	"1118.63994"	"1118.64073"	"-0.70"	"-0.00039"	"5/50"	"5"	"50"	"1575797.47009277"	"HCD"	"MS2"	"8.745399"	"68.4"	"100.000"	"72.0201"	"24265"	"24265"	"24246"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"86.7"	""	"93.8"	""	"98.2"	""	"114.1"	""	"123.4"	"132.9"	""	"960"	"33"	"36.000"	"29.000"	"0.0251907580919891"	"23"	"0.003449"	"0.0343"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIDEPR"	"[R].lFIDEPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"559.82379"	"1118.64031"	"1118.64073"	"-0.37"	"-0.00021"	"5/50"	"5"	"50"	"994048.894287109"	"HCD"	"MS2"	"9.0496"	"47.6"	"100.000"	"72.3009"	"24366"	"24366"	"24346"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.8"	""	"62.5"	""	"65.4"	""	"69.6"	"2.1"	"95.0"	"97.9"	""	"956"	"35"	"36.000"	"29.000"	"0.0162340880298215"	"23"	"0.00447"	"0.04689"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIDEPR"	"[R].lFIDEPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"559.82404"	"1118.64079"	"1118.64073"	"0.06"	"0.00003"	"5/50"	"5"	"50"	"1173790.47070313"	"HCD"	"MS2"	"9.176247"	"53.6"	"100.000"	"71.8860"	"24197"	"24197"	"24177"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"85.3"	""	"74.2"	""	"74.0"	""	"75.9"	""	"93.3"	"105.6"	""	"965"	"39"	"36.000"	"29.000"	"0.00551438796536065"	"28"	"0.001546"	"0.01883"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNITSDEL"	"[K].vNITSDEL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35217"	"Multiple inositol polyphosphate phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Minpp1 PE=1 SV=3"	"O35217"	"Multiple inositol polyphosphate phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Minpp1 PE=1 SV=3"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"560.30701"	"1119.60674"	"1119.60949"	"-2.45"	"-0.00137"	"6/62"	"6"	"62"	"245438.788879395"	"HCD"	"MS2"	"35.0802"	"11.1"	"100.000"	"83.6012"	"28919"	"28919"	"28901"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.1"	""	"13.4"	""	"15.8"	""	"19.3"	""	"23.5"	"20.5"	""	"760"	"31"	"35.000"	"28.000"	"0.0271508603908695"	"23"	"0.001886"	"0.0209"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNITSDEL"	"[K].vNITSDEL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35217"	"Multiple inositol polyphosphate phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Minpp1 PE=1 SV=3"	"O35217"	"Multiple inositol polyphosphate phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Minpp1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"560.30743"	"1119.60759"	"1119.60949"	"-1.69"	"-0.00095"	"5/62"	"5"	"62"	"256096.505615234"	"HCD"	"MS2"	"29.08188"	"12.5"	"100.000"	"83.6355"	"28930"	"28930"	"28910"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.9"	""	"16.0"	""	"14.7"	""	"23.1"	""	"22.7"	"27.5"	""	"752"	"24"	"35.000"	"28.000"	"0.155663877732219"	"20"	"0.006769"	"0.07671"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDASESLR"	"[K].lDASESLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"560.31329"	"1119.61931"	"1119.62072"	"-1.26"	"-0.00070"	"6/64"	"6"	"64"	"4209991.69592285"	"HCD"	"MS2"	"4.611658"	"207.3"	"100.000"	"46.1890"	"13786"	"13786"	"13769"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"181.5"	""	"171.3"	""	"202.4"	""	"392.9"	""	"492.2"	"536.9"	""	"794"	"31"	"35.000"	"28.000"	"0.0290931339656145"	"24"	"0.0008629"	"0.009674"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDASESLR"	"[K].lDASESLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"560.31348"	"1119.61968"	"1119.62072"	"-0.93"	"-0.00052"	"6/64"	"6"	"64"	"7694596.29748535"	"HCD"	"MS2"	"17.84308"	"364.1"	"100.000"	"45.8825"	"13660"	"13660"	"13642"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"323.2"	""	"323.9"	""	"360.9"	""	"692.1"	""	"893.3"	"881.7"	""	"794"	"41"	"35.000"	"28.000"	"0.0033946148501522"	"24"	"0.0002479"	"0.005569"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDASESLR"	"[K].lDASESLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"560.31360"	"1119.61992"	"1119.62072"	"-0.71"	"-0.00040"	"6/64"	"6"	"64"	"8005087.79003906"	"HCD"	"MS2"	"19.50809"	"368.9"	"100.000"	"46.0437"	"13714"	"13714"	"13693"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"355.9"	""	"312.5"	""	"364.8"	""	"725.8"	""	"862.8"	"897.7"	""	"798"	"39"	"36.000"	"29.000"	"0.00527196958040444"	"26"	"0.0001301"	"0.0048"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDASESLR"	"[K].lDASESLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.6585"	"0.0000"	"1"	"1"	"1"	"560.31384"	"1119.62041"	"1119.62072"	"-0.28"	"-0.00015"	"6/64"	"6"	"64"	"4501368.45800781"	"HCD"	"MS2"	"5.186211"	"210.7"	"100.000"	"46.3431"	"13837"	"13837"	"13821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"184.9"	""	"172.5"	""	"205.7"	""	"406.6"	""	"512.8"	"527.0"	""	"792"	"41"	"35.000"	"28.000"	"0.00330137749109375"	""	"0.0001301"	"0.00388"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTLTQNR"	"[K].tGTLTQNR.[M]"	"N-Term(TMT6plex)"	"1"	"6"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P09626; Q64541; P06687; P54708; P06685; P06686"	"Potassium-transporting ATPase alpha chain 1 OS=Rattus norvegicus OX=10116 GN=Atp4a PE=1 SV=3; Sodium/potassium-transporting ATPase subunit alpha-4 OS=Rattus norvegicus OX=10116 GN=Atp1a4 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Atp1a3 PE=1 SV=2; Potassium-transporting ATPase alpha chain 2 OS=Rattus norvegicus OX=10116 GN=Atp12a PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"560.31903"	"1119.63078"	"1119.63195"	"-1.04"	"-0.00058"	"6/68"	"6"	"68"	"7586074.75201416"	"HCD"	"MS2"	"14.52182"	"365.9"	"100.000"	"23.9782"	"4787"	"4787"	"4767"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"446.5"	""	"413.5"	""	"429.0"	""	"633.7"	""	"768.5"	"787.2"	""	"822"	"27"	"36.000"	"29.000"	"0.0820052811452209"	"23"	"0.001374"	"0.01588"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTLTQNR"	"[K].tGTLTQNR.[M]"	"N-Term(TMT6plex)"	"1"	"6"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P09626; Q64541; P06687; P54708; P06685; P06686"	"Potassium-transporting ATPase alpha chain 1 OS=Rattus norvegicus OX=10116 GN=Atp4a PE=1 SV=3; Sodium/potassium-transporting ATPase subunit alpha-4 OS=Rattus norvegicus OX=10116 GN=Atp1a4 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Atp1a3 PE=1 SV=2; Potassium-transporting ATPase alpha chain 2 OS=Rattus norvegicus OX=10116 GN=Atp12a PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"560.31927"	"1119.63127"	"1119.63195"	"-0.61"	"-0.00034"	"6/68"	"6"	"68"	"7773468.41900635"	"HCD"	"MS2"	"9.686172"	"349.4"	"100.000"	"24.0923"	"4811"	"4811"	"4789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"435.1"	""	"391.0"	""	"403.5"	""	"622.4"	""	"717.5"	"749.7"	""	"820"	"26"	"36.000"	"29.000"	"0.113183692105034"	"23"	"0.001374"	"0.01718"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPYVQR"	"[K].lDPYVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"560.32153"	"1119.63579"	"1119.63597"	"-0.17"	"-0.00009"	"5/50"	"5"	"50"	"2919622.18048096"	"HCD"	"MS2"	"36.92331"	"122.8"	"100.000"	"48.6669"	"14795"	"14795"	"14767"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"178.0"	""	"163.3"	""	"151.3"	""	"206.8"	"0.6"	"236.5"	"227.5"	""	"758"	"36"	"35.000"	"28.000"	"0.00992291360114996"	""	"0.001374"	"0.01617"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPYVQR"	"[K].lDPYVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"560.32184"	"1119.63640"	"1119.63597"	"0.38"	"0.00021"	"5/50"	"5"	"50"	"2579791.66412354"	"HCD"	"MS2"	"18.76091"	"114.2"	"100.000"	"49.0157"	"14924"	"14924"	"14904"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"163.0"	""	"148.3"	""	"157.3"	""	"183.6"	"0.1"	"215.6"	"214.4"	""	"763"	"36"	"35.000"	"28.000"	"0.0103632158106211"	""	"0.001635"	"0.01973"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPYVQR"	"[K].lDPYVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"560.32263"	"1119.63799"	"1119.63597"	"1.80"	"0.00101"	"5/50"	"5"	"50"	"1638393.56225586"	"HCD"	"MS2"	"10.49081"	"81.3"	"100.000"	"49.3882"	"15076"	"15076"	"15059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"106.5"	""	"85.8"	""	"111.0"	""	"134.1"	""	"173.1"	"162.2"	""	"741"	"36"	"35.000"	"28.000"	"0.0101809478372444"	""	"0.006189"	"0.07066"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIATSQNR"	"[K].tIATSQNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"2"	"2"	"0.2941"	"0.0000"	"1"	"1"	"1"	"560.32355"	"1119.63982"	"1119.63195"	"7.03"	"0.00393"	"7/68"	"7"	"68"	"10560941.767395"	"HCD"	"MS2"	"7.570513"	"698.8"	"100.000"	"22.4174"	"4150"	"4150"	"4126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1083.3"	""	"730.6"	""	"826.4"	""	"1217.2"	""	"1376.9"	"1405.3"	""	"744"	"17"	"35.000"	"28.000"	"0.742237581168423"	"25"	"0.007147"	"0.08215"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIATSQNR"	"[K].tIATSQNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"560.32416"	"1119.64104"	"1119.63195"	"8.12"	"0.00454"	"7/68"	"7"	"68"	"5356750.19488525"	"HCD"	"MS2"	"23.7653"	"235.4"	"100.000"	"22.4037"	"4128"	"4128"	"4104"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"343.8"	""	"241.0"	""	"274.8"	""	"420.8"	""	"487.0"	"469.6"	""	"760"	"18"	"35.000"	"28.000"	"0.661886611888813"	"22"	"0.005183"	"0.05895"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMEDLLR"	"[R].dMEDLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"560.79657"	"1120.58586"	"1120.58698"	"-0.99"	"-0.00056"	"9/54"	"9"	"54"	"1941851.34216309"	"HCD"	"MS2"	"10.97135"	"90.0"	"100.000"	"76.4817"	"26068"	"26068"	"26050"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"138.7"	""	"105.7"	""	"125.9"	""	"122.3"	"0.3"	"176.6"	"184.0"	""	"586"	"30"	"34.000"	"27.000"	"0.0309647530199602"	"23"	"0.002973"	"0.02899"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMEDLLR"	"[R].dMEDLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"560.79669"	"1120.58611"	"1120.58698"	"-0.77"	"-0.00043"	"9/54"	"9"	"54"	"818013.823242188"	"HCD"	"MS2"	"26.59896"	"43.3"	"100.000"	"76.3260"	"25996"	"25996"	"25976"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.8"	""	"52.9"	""	"60.8"	""	"55.4"	""	"80.6"	"86.0"	""	"586"	"32"	"34.000"	"27.000"	"0.0180662335545414"	"26"	"0.001211"	"0.01441"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMEDLLR"	"[R].dMEDLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"560.79694"	"1120.58660"	"1120.58698"	"-0.34"	"-0.00019"	"8/54"	"8"	"54"	"652348.532714844"	"HCD"	"MS2"	"19.75497"	"34.8"	"100.000"	"76.1955"	"25952"	"25952"	"25935"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.2"	""	"46.9"	""	"53.2"	""	"43.0"	""	"73.8"	"57.7"	""	"585"	"26"	"34.000"	"27.000"	"0.0663935469176017"	"26"	"0.001211"	"0.01525"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNDLLFR"	"[K].nNDLLFR.[ND]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355; Q62774"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2; Unconventional myosin-Ia (Fragment) OS=Rattus norvegicus OX=10116 GN=Myo1a PE=2 SV=1"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"560.81836"	"1120.62944"	"1120.63122"	"-1.59"	"-0.00089"	"5/60"	"5"	"60"	"1890805.9041748"	"HCD"	"MS2"	"0"	"83.0"	"100.000"	"59.9959"	"19387"	"19387"	"19377"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"102.7"	""	"117.8"	""	"111.4"	""	"111.2"	""	"149.4"	"196.6"	""	"631"	"25"	"34.000"	"28.000"	"0.104471868827757"	"27"	"0.007627"	"0.09131"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNDLLFR"	"[K].nNDLLFR.[ND]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355; Q62774"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2; Unconventional myosin-Ia (Fragment) OS=Rattus norvegicus OX=10116 GN=Myo1a PE=2 SV=1"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"560.81915"	"1120.63103"	"1120.63122"	"-0.17"	"-0.00010"	"5/60"	"5"	"60"	"2283280.546875"	"HCD"	"MS2"	"0"	"105.3"	"100.000"	"60.2394"	"19471"	"19471"	"19463"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"123.7"	""	"145.4"	""	"156.6"	""	"142.7"	""	"192.4"	"242.6"	""	"684"	"25"	"35.000"	"28.000"	"0.106420698729026"	"27"	"0.006254"	"0.07081"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDEVLIR"	"[R].fDEVLIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"560.83093"	"1120.65459"	"1120.65638"	"-1.59"	"-0.00089"	"5/50"	"5"	"50"	"278474.836975098"	"HCD"	"MS2"	"55.56964"	"16.5"	"100.000"	"83.6978"	"28955"	"28955"	"28935"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.4"	""	"18.9"	""	"19.1"	""	"20.7"	"0.8"	"34.7"	"38.9"	""	"618"	"12"	"34.000"	"27.000"	"1.88781085695822"	"16"	"0.009081"	"0.1172"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYHSLFSPR"	"[K].DYHSLFSPR.[C]"	""	"1"	"1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"374.51688"	"1121.53608"	"1121.53743"	"-1.21"	"-0.00045"	"6/76"	"6"	"76"	"1470064.43133545"	"HCD"	"MS2"	"11.45255"	"12.1"	"100.000"	"48.8167"	"14856"	"14856"	"14831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.9"	""	"15.5"	""	"19.6"	""	"18.6"	""	"24.7"	"22.9"	"NoQuanLabels"	"304"	"29"	"31.000"	"24.000"	"0.019808135032475"	"15"	"0.004022"	"0.04294"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYHSLFSPR"	"[K].DYHSLFSPR.[C]"	""	"1"	"1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"374.51694"	"1121.53626"	"1121.53743"	"-1.05"	"-0.00039"	"6/76"	"6"	"76"	"1423546.33361816"	"HCD"	"MS2"	"6.724687"	"11.9"	"100.000"	"49.1309"	"14971"	"14971"	"14950"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.5"	""	"14.3"	""	"17.1"	""	"21.4"	""	"21.8"	"22.9"	"NoQuanLabels"	"329"	"37"	"32.000"	"25.000"	"0.00331257639102363"	"19"	"0.001211"	"0.01555"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNLLQVCER"	"[R].TNLLQVcER.[I]"	"C7(Methylthio)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6852"	"0.0000"	"1"	"1"	"1"	"561.27527"	"1121.54326"	"1121.54418"	"-0.82"	"-0.00046"	"6/92"	"6"	"92"	"234396.274475098"	"HCD"	"MS2"	"16.53574"	"8.0"	"100.000"	"79.9404"	"27460"	"27460"	"27435"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.4"	""	"8.6"	""	"14.6"	""	"14.8"	""	"15.9"	"12.8"	"NoQuanLabels"	"359"	"54"	"32.000"	"25.000"	"6.65371895599723E-05"	""	"0.0008629"	"0.01096"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNLLQVCER"	"[R].TNLLQVcER.[I]"	"C7(Methylthio)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"561.27612"	"1121.54497"	"1121.54418"	"0.71"	"0.00040"	"6/92"	"6"	"92"	"250539.366088867"	"HCD"	"MS2"	"16.82578"	"8.8"	"100.000"	"79.9702"	"27468"	"27468"	"27441"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.1"	""	"12.8"	""	"12.1"	""	"14.7"	""	"18.3"	"19.0"	"NoQuanLabels"	"360"	"29"	"32.000"	"25.000"	"0.0237286212940153"	""	"0.004676"	"0.05038"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWEMVGR"	"[R].dWEMVGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32KJ6"	"N-acetylgalactosamine-6-sulfatase OS=Rattus norvegicus OX=10116 GN=Galns PE=1 SV=1"	"Q32KJ6"	"N-acetylgalactosamine-6-sulfatase OS=Rattus norvegicus OX=10116 GN=Galns PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"561.28339"	"1121.55950"	"1121.56110"	"-1.43"	"-0.00080"	"6/52"	"6"	"52"	"1368251.69781494"	"HCD"	"MS2"	"0"	"63.0"	"100.000"	"61.5376"	"19991"	"19991"	"19969"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"95.2"	""	"83.2"	""	"86.5"	""	"90.3"	"2.4"	"111.6"	"128.0"	""	"422"	"13"	"33.000"	"26.000"	"1.04539990259811"	"17"	"0.00736"	"0.08735"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPFGTEGR"	"[K].ePFGTEGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"561.29266"	"1121.57805"	"1121.57885"	"-0.72"	"-0.00040"	"6/66"	"6"	"66"	"4344515.15795898"	"HCD"	"MS2"	"18.35467"	"214.7"	"100.000"	"36.2911"	"9764"	"9764"	"9747"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"305.1"	""	"279.0"	""	"278.5"	""	"371.4"	"0.1"	"419.0"	"381.9"	""	"558"	"32"	"34.000"	"27.000"	"0.0159075831966329"	""	"0.0002479"	"0.00569"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPFGTEGR"	"[K].ePFGTEGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.4138"	"0.0000"	"1"	"1"	"1"	"561.29333"	"1121.57939"	"1121.57885"	"0.48"	"0.00027"	"6/66"	"6"	"66"	"5107187.63433838"	"HCD"	"MS2"	"20.86067"	"251.1"	"100.000"	"36.4897"	"9838"	"9838"	"9819"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"363.1"	""	"319.5"	""	"339.7"	""	"440.9"	"2.3"	"453.5"	"459.8"	""	"583"	"29"	"34.000"	"27.000"	"0.0383388038584038"	""	"0.0006732"	"0.008541"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTIENPR"	"[K].yTIENPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"561.31091"	"1121.61455"	"1121.61524"	"-0.61"	"-0.00034"	"5/56"	"5"	"56"	"2544555.5032959"	"HCD"	"MS2"	"0"	"145.3"	"100.000"	"38.6256"	"10701"	"10701"	"10687"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"184.4"	""	"168.3"	""	"171.2"	""	"227.0"	""	"320.6"	"311.4"	""	"752"	"28"	"35.000"	"28.000"	"0.0601433818759115"	"23"	"0.00599"	"0.06937"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTIENPR"	"[K].yTIENPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"561.31091"	"1121.61455"	"1121.61524"	"-0.61"	"-0.00034"	"5/56"	"5"	"56"	"3057515.11236572"	"HCD"	"MS2"	"0"	"170.5"	"100.000"	"38.4360"	"10632"	"10632"	"10613"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"230.9"	""	"184.3"	""	"206.8"	""	"274.7"	"0.6"	"364.1"	"358.1"	""	"752"	"26"	"35.000"	"28.000"	"0.0929368278526065"	"24"	"0.00736"	"0.08719"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTIENPR"	"[K].yTIENPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"561.31104"	"1121.61479"	"1121.61524"	"-0.40"	"-0.00022"	"5/56"	"5"	"56"	"2780455.46435547"	"HCD"	"MS2"	"22.58351"	"157.9"	"100.000"	"38.3337"	"10582"	"10582"	"10562"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"231.8"	""	"189.3"	""	"199.0"	""	"255.2"	"0.3"	"301.7"	"320.1"	""	"756"	"19"	"35.000"	"28.000"	"0.527827240479144"	"23"	"0.007339"	"0.08394"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTIENPR"	"[K].yTIENPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"561.31146"	"1121.61565"	"1121.61524"	"0.36"	"0.00020"	"5/56"	"5"	"56"	"2903324.49163818"	"HCD"	"MS2"	"28.81549"	"165.5"	"100.000"	"38.1348"	"10509"	"10509"	"10490"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"221.0"	""	"199.5"	""	"201.2"	""	"299.3"	""	"312.6"	"338.3"	""	"766"	"25"	"35.000"	"28.000"	"0.111480465621951"	"25"	"0.007339"	"0.08408"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lmDDLDR.[N]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"561.78607"	"1122.56487"	"1122.56624"	"-1.22"	"-0.00069"	"6/54"	"6"	"54"	"1769038.04736328"	"HCD"	"MS2"	"16.97535"	"82.1"	"100.000"	"55.8475"	"17720"	"17720"	"17697"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"107.3"	""	"91.1"	""	"96.8"	""	"151.1"	""	"171.9"	"167.7"	""	"547"	"20"	"34.000"	"27.000"	"0.284418165354248"	"22"	"0.007627"	"0.09245"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lmDDLDR.[N]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"561.78625"	"1122.56523"	"1122.56624"	"-0.90"	"-0.00050"	"6/54"	"6"	"54"	"4786062.57037354"	"HCD"	"MS2"	"27.50516"	"219.8"	"100.000"	"43.3101"	"12608"	"12608"	"12588"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"203.9"	""	"188.6"	""	"182.2"	""	"612.2"	""	"450.0"	"456.7"	""	"522"	"22"	"34.000"	"27.000"	"0.183924891000425"	"18"	"0.006685"	"0.07438"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lmDDLDR.[N]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"561.78638"	"1122.56548"	"1122.56624"	"-0.68"	"-0.00038"	"6/54"	"6"	"54"	"1414176.01867676"	"HCD"	"MS2"	"19.57581"	"56.2"	"100.000"	"57.6899"	"18471"	"18471"	"18453"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.4"	""	"65.7"	""	"71.6"	""	"85.0"	"0.3"	"118.4"	"118.6"	""	"522"	"15"	"34.000"	"27.000"	"0.85632871502524"	"18"	"0.009021"	"0.116"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lmDDLDR.[N]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"561.78638"	"1122.56548"	"1122.56624"	"-0.68"	"-0.00038"	"6/54"	"6"	"54"	"1911483.7230835"	"HCD"	"MS2"	"22.17592"	"78.3"	"100.000"	"50.5938"	"15579"	"15579"	"15558"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"96.1"	""	"88.5"	""	"102.8"	""	"129.8"	""	"158.2"	"169.1"	""	"522"	"20"	"34.000"	"27.000"	"0.282254261288761"	"19"	"0.00736"	"0.0875"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lmDDLDR.[N]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"561.78644"	"1122.56560"	"1122.56624"	"-0.57"	"-0.00032"	"6/54"	"6"	"54"	"1813221.64056396"	"HCD"	"MS2"	"20.7167"	"78.3"	"100.000"	"50.9260"	"15703"	"15703"	"15684"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"93.4"	""	"86.4"	""	"114.0"	""	"128.3"	""	"164.6"	"162.6"	""	"524"	"16"	"34.000"	"27.000"	"0.665734848853918"	"17"	"0.008437"	"0.1008"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lmDDLDR.[N]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"561.78650"	"1122.56572"	"1122.56624"	"-0.46"	"-0.00026"	"6/54"	"6"	"54"	"6080001.08673096"	"HCD"	"MS2"	"29.58993"	"268.0"	"100.000"	"43.2176"	"12581"	"12581"	"12562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"253.7"	""	"208.3"	""	"228.2"	""	"763.4"	""	"547.2"	"548.5"	""	"524"	"26"	"34.000"	"27.000"	"0.0671894817567641"	"19"	"0.00447"	"0.04764"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lmDDLDR.[N]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"561.78662"	"1122.56597"	"1122.56624"	"-0.24"	"-0.00014"	"6/54"	"6"	"54"	"1819370.94348145"	"HCD"	"MS2"	"12.46324"	"72.1"	"100.000"	"55.7967"	"17685"	"17685"	"17666"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.6"	""	"81.7"	""	"92.0"	""	"128.1"	""	"146.1"	"150.1"	""	"520"	"17"	"34.000"	"27.000"	"0.529630940203486"	"19"	"0.008522"	"0.1044"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lmDDLDR.[N]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"561.78662"	"1122.56597"	"1122.56624"	"-0.24"	"-0.00014"	"6/54"	"6"	"54"	"5069301.05657959"	"HCD"	"MS2"	"53.50314"	"202.5"	"100.000"	"44.0278"	"12898"	"12898"	"12875"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"229.3"	""	"214.2"	""	"240.9"	""	"414.6"	"0.3"	"414.8"	"409.1"	""	"520"	"23"	"34.000"	"27.000"	"0.124157611150999"	"17"	"0.007627"	"0.09336"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lmDDLDR.[N]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"561.78662"	"1122.56597"	"1122.56624"	"-0.24"	"-0.00014"	"6/54"	"6"	"54"	"5265904.0960083"	"HCD"	"MS2"	"27.23279"	"201.8"	"100.000"	"43.9262"	"12867"	"12867"	"12853"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"230.6"	""	"209.7"	""	"224.3"	""	"417.9"	""	"420.1"	"415.0"	""	"520"	"24"	"34.000"	"27.000"	"0.0948360262006579"	"18"	"0.00736"	"0.08647"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lmDDLDR.[N]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"561.78668"	"1122.56609"	"1122.56624"	"-0.14"	"-0.00008"	"10/54"	"10"	"54"	"1663706.80950928"	"HCD"	"MS2"	"3.324598"	"75.3"	"100.000"	"50.2868"	"15443"	"15443"	"15422"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.6"	""	"87.5"	""	"105.7"	""	"130.0"	""	"156.9"	"148.6"	""	"520"	"21"	"34.000"	"27.000"	"0.211823113845418"	"18"	"0.004069"	"0.04492"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lmDDLDR.[N]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"561.78668"	"1122.56609"	"1122.56624"	"-0.14"	"-0.00008"	"9/54"	"9"	"54"	"2160552.34411621"	"HCD"	"MS2"	"38.62053"	"77.9"	"100.000"	"51.7322"	"16032"	"16032"	"16011"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"98.6"	""	"87.9"	""	"99.3"	""	"148.5"	""	"153.6"	"151.8"	""	"520"	"15"	"34.000"	"27.000"	"0.751576769415023"	"18"	"0.007627"	"0.09187"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTNDSLMR"	"[K].gTNDSLMR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"561.79260"	"1122.57793"	"1122.57747"	"0.41"	"0.00023"	"7/72"	"7"	"72"	"3745881.16827393"	"HCD"	"MS2"	"10.20216"	"236.6"	"100.000"	"30.2420"	"7315"	"7315"	"7296"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"372.3"	""	"423.5"	""	"415.9"	""	"209.2"	"11.4"	"387.4"	"417.1"	""	"566"	"30"	"34.000"	"27.000"	"0.0297705210291972"	"24"	"0.0002479"	"0.005872"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTNDSLMR"	"[K].gTNDSLMR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"561.79291"	"1122.57854"	"1122.57747"	"0.95"	"0.00053"	"6/72"	"6"	"72"	"3405712.52618408"	"HCD"	"MS2"	"13.0797"	"218.1"	"100.000"	"30.2628"	"7312"	"7312"	"7290"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"339.8"	""	"407.4"	""	"384.0"	""	"186.7"	"9.1"	"352.9"	"382.1"	""	"572"	"28"	"34.000"	"27.000"	"0.0453279453043878"	"24"	"0.0004639"	"0.008"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDIFDR"	"[K].dLDIFDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVQ4"	"Malectin OS=Rattus norvegicus OX=10116 GN=Mlec PE=2 SV=1"	"Q5FVQ4"	"Malectin OS=Rattus norvegicus OX=10116 GN=Mlec PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"561.80261"	"1122.59795"	"1122.59925"	"-1.16"	"-0.00065"	"6/58"	"6"	"58"	"661480.901306152"	"HCD"	"MS2"	"35.14899"	"32.7"	"100.000"	"85.5483"	"29685"	"29685"	"29673"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.0"	""	"37.6"	""	"41.5"	""	"56.4"	""	"67.3"	"66.1"	""	"685"	"18"	"35.000"	"28.000"	"0.560609658589024"	"23"	"0.003507"	"0.0364"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDIFDR"	"[K].dLDIFDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVQ4"	"Malectin OS=Rattus norvegicus OX=10116 GN=Mlec PE=2 SV=1"	"Q5FVQ4"	"Malectin OS=Rattus norvegicus OX=10116 GN=Mlec PE=2 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"561.80273"	"1122.59819"	"1122.59925"	"-0.95"	"-0.00053"	"6/58"	"6"	"58"	"1429442.94354248"	"HCD"	"MS2"	"36.93175"	"60.2"	"100.000"	"85.4505"	"29647"	"29647"	"29633"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.2"	""	"64.1"	""	"65.9"	""	"108.6"	"1.6"	"126.1"	"122.3"	""	"691"	"26"	"35.000"	"28.000"	"0.0826890593838062"	"28"	"0.002056"	"0.0222"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INAADYAR"	"[K].iNAADYAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"561.80847"	"1122.60967"	"1122.61049"	"-0.73"	"-0.00041"	"5/68"	"5"	"68"	"2851466.91369629"	"HCD"	"MS2"	"100"	"138.7"	"100.000"	"43.7229"	"12776"	"12776"	"12762"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"206.4"	""	"173.6"	""	"175.8"	""	"224.7"	""	"265.4"	"271.9"	""	"620"	"21"	"34.000"	"27.000"	"0.233540224757452"	"14"	"0.0002479"	"0.005044"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INAADYAR"	"[K].iNAADYAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"561.80859"	"1122.60991"	"1122.61049"	"-0.51"	"-0.00029"	"9/68"	"9"	"68"	"4110790.36932373"	"HCD"	"MS2"	"8.94185"	"188.6"	"100.000"	"43.6189"	"12743"	"12743"	"12734"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"280.4"	""	"253.1"	""	"260.4"	""	"286.2"	""	"340.3"	"366.6"	""	"620"	"35"	"34.000"	"27.000"	"0.0105283834503027"	"19"	"0.0002479"	"0.005229"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYAEGINR"	"[R].aYAEGINR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"561.80859"	"1122.60991"	"1122.61049"	"-0.51"	"-0.00029"	"6/58"	"6"	"58"	"14864876.1394653"	"HCD"	"MS2"	"15.76275"	"691.4"	"100.000"	"33.1957"	"8505"	"8505"	"8484"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1185.8"	""	"1005.0"	""	"991.4"	""	"992.8"	""	"1171.4"	"1197.8"	""	"620"	"31"	"34.000"	"27.000"	"0.026203644199969"	"21"	"0.0005778"	"0.00808"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYAEGINR"	"[R].aYAEGINR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"561.80872"	"1122.61016"	"1122.61049"	"-0.30"	"-0.00017"	"7/58"	"7"	"58"	"12004648.7299805"	"HCD"	"MS2"	"0"	"472.5"	"87.727"	"33.4802"	"8621"	"8621"	"8606"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"797.7"	""	"638.9"	""	"692.7"	""	"669.8"	""	"806.7"	"867.4"	""	"643"	"13"	"35.000"	"28.000"	"1.60761102995099"	"19"	"0.008437"	"0.1"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYAEGINR"	"[R].aYAEGINR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"561.80920"	"1122.61113"	"1122.61049"	"0.57"	"0.00032"	"6/58"	"6"	"58"	"11905697.7845459"	"HCD"	"MS2"	"43.55074"	"573.1"	"100.000"	"33.1611"	"8498"	"8498"	"8475"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"977.9"	""	"829.4"	""	"800.0"	""	"854.9"	""	"970.2"	"993.2"	""	"645"	"27"	"35.000"	"28.000"	"0.0576142242889787"	"19"	"0.0003538"	"0.006934"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYAEGINR"	"[R].aYAEGINR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"561.80920"	"1122.61113"	"1122.61049"	"0.57"	"0.00032"	"7/58"	"7"	"58"	"12882056.4422607"	"HCD"	"MS2"	"0"	"515.1"	"90.957"	"33.4572"	"8618"	"8618"	"8607"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"890.2"	""	"702.4"	""	"741.9"	""	"731.8"	""	"896.6"	"914.5"	""	"645"	"14"	"35.000"	"28.000"	"1.22329082654013"	"22"	"0.002973"	"0.02927"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDLYDVR"	"[K].iDLYDVR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"P54290"	"Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Rattus norvegicus OX=10116 GN=Cacna2d1 PE=1 SV=1"	"P54290; Q8CFG6"	"Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Rattus norvegicus OX=10116 GN=Cacna2d1 PE=1 SV=1; Voltage-dependent calcium channel subunit alpha-2/delta-2 OS=Rattus norvegicus OX=10116 GN=Cacna2d2 PE=2 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"561.82062"	"1122.63396"	"1122.63564"	"-1.50"	"-0.00084"	"5/54"	"5"	"54"	"611169.469604492"	"HCD"	"MS2"	"3.78795"	"23.2"	"100.000"	"75.4549"	"25652"	"25652"	"25641"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.8"	""	"20.5"	""	"28.5"	""	"39.7"	""	"45.5"	"62.4"	""	"570"	"24"	"34.000"	"27.000"	"0.120183503477146"	"21"	"0.008522"	"0.1054"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDLYDVR"	"[K].iDLYDVR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"P54290"	"Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Rattus norvegicus OX=10116 GN=Cacna2d1 PE=1 SV=1"	"P54290; Q8CFG6"	"Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Rattus norvegicus OX=10116 GN=Cacna2d1 PE=1 SV=1; Voltage-dependent calcium channel subunit alpha-2/delta-2 OS=Rattus norvegicus OX=10116 GN=Cacna2d2 PE=2 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"561.82068"	"1122.63408"	"1122.63564"	"-1.39"	"-0.00078"	"5/54"	"5"	"54"	"604936.166687012"	"HCD"	"MS2"	"0"	"31.7"	"100.000"	"75.5829"	"25694"	"25694"	"25675"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.8"	""	"29.9"	""	"29.0"	""	"62.9"	""	"57.2"	"87.3"	""	"571"	"27"	"34.000"	"27.000"	"0.0617456138524065"	"15"	"0.002937"	"0.02781"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDLYDVR"	"[K].iDLYDVR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"P54290"	"Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Rattus norvegicus OX=10116 GN=Cacna2d1 PE=1 SV=1"	"P54290; Q8CFG6"	"Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Rattus norvegicus OX=10116 GN=Cacna2d1 PE=1 SV=1; Voltage-dependent calcium channel subunit alpha-2/delta-2 OS=Rattus norvegicus OX=10116 GN=Cacna2d2 PE=2 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"561.82098"	"1122.63469"	"1122.63564"	"-0.85"	"-0.00047"	"4/54"	"4"	"54"	"677297.428649902"	"HCD"	"MS2"	"8.113744"	"32.3"	"100.000"	"75.1686"	"25537"	"25537"	"25518"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.7"	""	"26.1"	""	"27.7"	""	"59.3"	"0.1"	"61.7"	"98.7"	""	"574"	"26"	"34.000"	"27.000"	"0.0763628092162259"	"15"	"0.007147"	"0.08262"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLTEVER"	"[K].fLTEVER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35217"	"Multiple inositol polyphosphate phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Minpp1 PE=1 SV=3"	"O35217"	"Multiple inositol polyphosphate phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Minpp1 PE=1 SV=3"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"561.82104"	"1122.63481"	"1122.63564"	"-0.74"	"-0.00041"	"8/54"	"8"	"54"	"703649.121459961"	"HCD"	"MS2"	"51.38051"	"38.2"	"100.000"	"64.6718"	"21277"	"21277"	"21247"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.7"	""	"43.8"	""	"44.0"	""	"68.0"	""	"73.0"	"80.5"	""	"574"	"17"	"34.000"	"27.000"	"0.524664762032968"	"16"	"0.008478"	"0.1035"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDLYDVR"	"[K].iDLYDVR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"P54290"	"Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Rattus norvegicus OX=10116 GN=Cacna2d1 PE=1 SV=1"	"P54290; Q8CFG6"	"Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Rattus norvegicus OX=10116 GN=Cacna2d1 PE=1 SV=1; Voltage-dependent calcium channel subunit alpha-2/delta-2 OS=Rattus norvegicus OX=10116 GN=Cacna2d2 PE=2 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"561.82111"	"1122.63494"	"1122.63564"	"-0.63"	"-0.00035"	"4/54"	"4"	"54"	"613240.149169922"	"HCD"	"MS2"	"41.58017"	"31.5"	"100.000"	"75.2896"	"25575"	"25575"	"25547"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.9"	""	"28.1"	""	"28.8"	""	"62.2"	""	"64.5"	"88.0"	""	"574"	"26"	"34.000"	"27.000"	"0.0799616775396745"	"15"	"0.005309"	"0.06008"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLTEVER"	"[K].fLTEVER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35217"	"Multiple inositol polyphosphate phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Minpp1 PE=1 SV=3"	"O35217"	"Multiple inositol polyphosphate phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Minpp1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"561.82111"	"1122.63494"	"1122.63564"	"-0.63"	"-0.00035"	"5/54"	"5"	"54"	"788118.233734131"	"HCD"	"MS2"	"23.22753"	"43.2"	"100.000"	"64.8005"	"21310"	"21310"	"21287"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.8"	""	"48.7"	""	"60.5"	""	"72.5"	""	"76.0"	"96.2"	""	"574"	"24"	"34.000"	"27.000"	"0.114784143181435"	"20"	"0.002973"	"0.02933"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITGDDSMR"	"[K].iTGDDSMR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"562.28363"	"1123.55998"	"1123.56149"	"-1.34"	"-0.00075"	"10/64"	"10"	"64"	"2129899.76672363"	"HCD"	"MS2"	"65.1116"	"160.2"	"100.000"	"34.8114"	"9158"	"9158"	"9135"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"216.6"	""	"199.7"	""	"217.8"	""	"229.0"	""	"328.3"	"341.5"	""	"486"	"6"	"33.000"	"26.000"	"6.67738279203883"	"18"	"0.003967"	"0.04125"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYEEALR"	"[K].nYEEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q793F9"	"Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"Q793F9"	"Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"562.30011"	"1123.59294"	"1123.59450"	"-1.39"	"-0.00078"	"5/62"	"5"	"62"	"1951770.21691895"	"HCD"	"MS2"	"30.04369"	"119.7"	"100.000"	"41.1048"	"11719"	"11719"	"11693"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"161.2"	""	"145.3"	""	"164.6"	""	"200.0"	"1.5"	"225.8"	"236.3"	""	"597"	"19"	"34.000"	"27.000"	"0.359703228200981"	"20"	"0.005829"	"0.06517"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDPVGYSR"	"[R].tDPVGYSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O35786"	"Chemokine-like receptor 1 OS=Rattus norvegicus OX=10116 GN=Cmklr1 PE=1 SV=1"	"O35786"	"Chemokine-like receptor 1 OS=Rattus norvegicus OX=10116 GN=Cmklr1 PE=1 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"562.30060"	"1123.59392"	"1123.59450"	"-0.52"	"-0.00029"	"5/68"	"5"	"68"	"6218662.32226563"	"HCD"	"MS2"	"43.95617"	"311.5"	"100.000"	"32.3961"	"8180"	"8180"	"8154"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"390.5"	""	"397.0"	""	"410.3"	""	"534.4"	""	"617.5"	"608.0"	""	"594"	"25"	"34.000"	"27.000"	"0.0882584811426194"	"25"	"0.0002479"	"0.005681"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADEGISFR"	"[K].aDEGISFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"562.30060"	"1123.59392"	"1123.59450"	"-0.52"	"-0.00029"	"9/64"	"9"	"64"	"15005476.5281982"	"HCD"	"MS2"	"8.473534"	"623.5"	"100.000"	"48.8396"	"14865"	"14865"	"14847"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"946.6"	""	"716.5"	""	"803.7"	""	"1017.8"	""	"1036.8"	"1392.2"	""	"594"	"32"	"34.000"	"27.000"	"0.0167786281519254"	"24"	"0.0006732"	"0.009006"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDPVGYSR"	"[R].tDPVGYSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O35786"	"Chemokine-like receptor 1 OS=Rattus norvegicus OX=10116 GN=Cmklr1 PE=1 SV=1"	"O35786"	"Chemokine-like receptor 1 OS=Rattus norvegicus OX=10116 GN=Cmklr1 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"562.30072"	"1123.59416"	"1123.59450"	"-0.30"	"-0.00017"	"6/68"	"6"	"68"	"5147242.88873291"	"HCD"	"MS2"	"53.99909"	"257.8"	"100.000"	"32.3244"	"8157"	"8157"	"8141"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"330.6"	""	"323.2"	""	"338.5"	""	"418.2"	""	"510.9"	"528.5"	""	"625"	"18"	"34.000"	"27.000"	"0.482892012355755"	"20"	"0.0004639"	"0.007824"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADEGISFR"	"[K].aDEGISFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"562.30078"	"1123.59429"	"1123.59450"	"-0.19"	"-0.00011"	"7/64"	"7"	"64"	"2924045.27325439"	"HCD"	"MS2"	"21.68171"	"130.9"	"100.000"	"49.4544"	"15115"	"15115"	"15095"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"190.6"	""	"159.8"	""	"179.2"	""	"211.5"	"2.2"	"241.0"	"256.3"	""	"625"	"21"	"34.000"	"27.000"	"0.229007666605908"	"24"	"0.000936"	"0.01171"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADEGISFR"	"[K].aDEGISFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"562.30084"	"1123.59441"	"1123.59450"	"-0.09"	"-0.00005"	"7/64"	"7"	"64"	"2699079.49060059"	"HCD"	"MS2"	"25.85003"	"134.9"	"100.000"	"49.8145"	"15250"	"15250"	"15232"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"207.0"	""	"145.3"	""	"186.2"	""	"229.7"	"5.3"	"242.8"	"261.9"	""	"625"	"23"	"34.000"	"27.000"	"0.170157079013257"	"25"	"0.0008629"	"0.01066"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADEGISFR"	"[K].aDEGISFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"562.30084"	"1123.59441"	"1123.59450"	"-0.09"	"-0.00005"	"12/64"	"12"	"64"	"32110861.1113281"	"HCD"	"MS2"	"0.3448027"	"391.6"	"29.468"	"49.1434"	"14989"	"14989"	"14976"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"602.4"	""	"486.7"	""	"524.4"	""	"640.2"	""	"695.7"	"763.2"	""	"625"	"37"	"34.000"	"27.000"	"0.00610731079929811"	"25"	"0.0006732"	"0.008254"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADEGISFR"	"[K].aDEGISFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"562.30090"	"1123.59453"	"1123.59450"	"0.02"	"0.00001"	"11/64"	"11"	"64"	"15913367.3399658"	"HCD"	"MS2"	"3.395377"	"672.0"	"100.000"	"49.1977"	"14999"	"14999"	"14982"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1018.1"	""	"769.8"	""	"857.7"	""	"1123.5"	""	"1134.4"	"1468.3"	""	"627"	"32"	"34.000"	"27.000"	"0.0195540870923738"	"24"	"0.0006732"	"0.008635"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYEEALR"	"[K].nYEEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q793F9"	"Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"Q793F9"	"Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"562.30096"	"1123.59465"	"1123.59450"	"0.13"	"0.00007"	"5/62"	"5"	"62"	"1949234.75421143"	"HCD"	"MS2"	"47.38663"	"117.9"	"100.000"	"41.2823"	"11781"	"11781"	"11763"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"142.9"	""	"142.8"	""	"151.9"	""	"202.8"	""	"238.4"	"240.6"	""	"627"	"28"	"34.000"	"27.000"	"0.0522682001134758"	"21"	"0.002973"	"0.02922"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADEGISFR"	"[K].aDEGISFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"562.30109"	"1123.59490"	"1123.59450"	"0.35"	"0.00020"	"11/64"	"11"	"64"	"29263458.6026611"	"HCD"	"MS2"	"0.2227564"	"417.0"	"32.628"	"49.4989"	"15122"	"15122"	"15105"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"627.3"	"2.7"	"506.0"	""	"561.0"	""	"689.9"	""	"748.9"	"822.2"	""	"627"	"33"	"34.000"	"27.000"	"0.0164527138788304"	"24"	"0.0008629"	"0.01072"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQDIYLR"	"[K].sQDIYLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"562.31842"	"1123.62956"	"1123.63089"	"-1.18"	"-0.00066"	"9/62"	"9"	"62"	"6300193.14532471"	"HCD"	"MS2"	"0"	"313.3"	"100.000"	"44.6833"	"13171"	"13171"	"13157"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"452.4"	"3.3"	"402.0"	""	"428.1"	""	"491.1"	""	"589.2"	"606.7"	""	"554"	"36"	"34.000"	"27.000"	"0.00775317825538719"	"19"	"0.003111"	"0.03154"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQDIYLR"	"[K].sQDIYLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"562.31848"	"1123.62969"	"1123.63089"	"-1.07"	"-0.00060"	"9/62"	"9"	"62"	"7764552.8807373"	"HCD"	"MS2"	"0.301358"	"336.2"	"100.000"	"44.7872"	"13202"	"13202"	"13184"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"484.6"	""	"422.3"	""	"467.7"	""	"507.9"	"2.0"	"671.6"	"631.5"	""	"554"	"36"	"34.000"	"27.000"	"0.00742129625974873"	"18"	"0.003922"	"0.03968"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQDIYLR"	"[K].sQDIYLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"562.31854"	"1123.62981"	"1123.63089"	"-0.96"	"-0.00054"	"9/62"	"9"	"62"	"7433772.51287842"	"HCD"	"MS2"	"8.972643"	"311.4"	"100.000"	"44.3834"	"13050"	"13050"	"13032"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"449.5"	""	"437.3"	""	"444.7"	""	"486.3"	""	"568.2"	"568.5"	""	"554"	"32"	"34.000"	"27.000"	"0.0169621058507762"	"17"	"0.003922"	"0.03953"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQDIYLR"	"[K].sQDIYLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"562.31915"	"1123.63103"	"1123.63089"	"0.12"	"0.00007"	"5/62"	"5"	"62"	"5474979.73468018"	"HCD"	"MS2"	"11.93658"	"240.8"	"100.000"	"44.4909"	"13082"	"13082"	"13061"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"349.2"	""	"291.7"	""	"348.6"	""	"384.2"	""	"464.3"	"447.9"	""	"564"	"32"	"34.000"	"27.000"	"0.0179163322782192"	"19"	"0.003449"	"0.03281"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVYPMER"	"[K].tVYPMER.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"Q4KM31"	"LIM domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Limd2 PE=2 SV=1"	"Q4KM31; F1LR10"	"LIM domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Limd2 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Lima1 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"562.80206"	"1124.59685"	"1124.59715"	"-0.26"	"-0.00015"	"9/58"	"9"	"58"	"2080057.10510254"	"HCD"	"MS2"	"0"	"114.7"	"100.000"	"42.4797"	"12269"	"12269"	"12245"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"176.7"	""	"157.7"	""	"144.1"	""	"145.9"	""	"229.2"	"236.9"	""	"515"	"24"	"34.000"	"27.000"	"0.105384619880478"	"16"	"0.005617"	"0.06402"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVYPMER"	"[K].tVYPMER.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"Q4KM31"	"LIM domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Limd2 PE=2 SV=1"	"Q4KM31; F1LR10"	"LIM domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Limd2 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Lima1 PE=1 SV=2"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"562.80206"	"1124.59685"	"1124.59715"	"-0.26"	"-0.00015"	"9/58"	"9"	"58"	"2136636.46459961"	"HCD"	"MS2"	"0"	"114.9"	"100.000"	"42.3461"	"12225"	"12225"	"12204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"180.4"	""	"164.2"	""	"158.4"	""	"128.2"	""	"223.2"	"235.9"	""	"515"	"24"	"34.000"	"27.000"	"0.0997188435673164"	"25"	"0.004817"	"0.05068"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSEYVR"	"[K].eLSEYVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"562.81024"	"1124.61321"	"1124.61490"	"-1.51"	"-0.00085"	"7/54"	"7"	"54"	"2912911.61633301"	"HCD"	"MS2"	"32.43497"	"131.7"	"100.000"	"52.6076"	"16401"	"16401"	"16376"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"187.7"	""	"164.5"	""	"185.1"	""	"224.1"	""	"234.1"	"253.8"	""	"488"	"29"	"33.000"	"26.000"	"0.0304361577475278"	"26"	"0.003449"	"0.03302"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSEYVR"	"[K].eLSEYVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"562.81036"	"1124.61345"	"1124.61490"	"-1.29"	"-0.00073"	"7/54"	"7"	"54"	"2573990.05908203"	"HCD"	"MS2"	"22.12043"	"127.5"	"100.000"	"52.8593"	"16492"	"16492"	"16471"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"178.2"	""	"167.6"	""	"182.1"	""	"214.4"	""	"238.8"	"226.8"	""	"490"	"29"	"33.000"	"26.000"	"0.0327465901553879"	"26"	"0.003111"	"0.03157"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILYDER"	"[K].sILYDER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"562.81049"	"1124.61370"	"1124.61490"	"-1.08"	"-0.00060"	"5/58"	"5"	"58"	"7153064.65820313"	"HCD"	"MS2"	"0"	"298.2"	"100.000"	"48.0593"	"14547"	"14547"	"14534"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"512.5"	""	"365.7"	""	"412.1"	""	"448.9"	"0.2"	"532.1"	"551.4"	""	"490"	"40"	"33.000"	"26.000"	"0.0023887246124076"	""	"0.001886"	"0.02129"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILYDER"	"[K].sILYDER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.6757"	"0.0000"	"1"	"1"	"1"	"562.81055"	"1124.61382"	"1124.61490"	"-0.97"	"-0.00054"	"5/58"	"5"	"58"	"7520713.67089844"	"HCD"	"MS2"	"0"	"321.8"	"100.000"	"48.3301"	"14645"	"14645"	"14633"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"516.0"	""	"408.3"	""	"448.3"	""	"474.5"	""	"599.7"	"603.1"	""	"490"	"37"	"33.000"	"26.000"	"0.00482132140978177"	""	"0.0023"	"0.02348"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILYDER"	"[K].sILYDER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"562.81061"	"1124.61394"	"1124.61490"	"-0.86"	"-0.00048"	"5/58"	"5"	"58"	"5554816.65332031"	"HCD"	"MS2"	"4.56896"	"249.0"	"100.000"	"47.7678"	"14428"	"14428"	"14407"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"405.6"	""	"324.4"	""	"332.2"	""	"392.7"	""	"452.7"	"451.1"	""	"491"	"40"	"33.000"	"26.000"	"0.00231766945128194"	""	"0.001374"	"0.01674"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILYDER"	"[K].sILYDER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"562.81085"	"1124.61443"	"1124.61490"	"-0.42"	"-0.00024"	"5/58"	"5"	"58"	"5061894.57330322"	"HCD"	"MS2"	"2.103079"	"225.8"	"100.000"	"48.0387"	"14526"	"14526"	"14513"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"377.1"	""	"287.8"	""	"321.1"	""	"339.5"	"0.4"	"409.3"	"402.6"	""	"487"	"44"	"33.000"	"26.000"	"0.000998846990772389"	""	"0.001211"	"0.01556"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGIDPPR"	"[K].qIGIDPPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"562.83447"	"1124.66167"	"1124.66252"	"-0.76"	"-0.00043"	"5/70"	"5"	"70"	"2673578.33660889"	"HCD"	"MS2"	"40.87794"	"111.6"	"100.000"	"49.8972"	"15284"	"15284"	"15262"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"150.4"	""	"145.3"	""	"160.4"	""	"194.6"	""	"199.7"	"207.2"	""	"301"	"24"	"31.000"	"24.000"	"0.0650933315707688"	""	"0.0008629"	"0.01076"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGIDPPR"	"[K].qIGIDPPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"562.83496"	"1124.66265"	"1124.66252"	"0.11"	"0.00006"	"5/70"	"5"	"70"	"2705492.28338623"	"HCD"	"MS2"	"40.53543"	"118.6"	"100.000"	"50.2108"	"15412"	"15412"	"15390"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"168.0"	""	"148.3"	""	"169.2"	""	"198.5"	"1.6"	"223.0"	"215.1"	""	"324"	"24"	"32.000"	"25.000"	"0.0672225549067668"	"25"	"0.002871"	"0.02672"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGIDPPR"	"[K].qIGIDPPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"562.83533"	"1124.66338"	"1124.66252"	"0.76"	"0.00043"	"5/70"	"5"	"70"	"2981844.84863281"	"HCD"	"MS2"	"29.19606"	"126.7"	"100.000"	"49.6432"	"15192"	"15192"	"15174"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"182.6"	""	"161.5"	""	"181.6"	""	"217.6"	""	"228.6"	"229.4"	""	"324"	"25"	"32.000"	"25.000"	"0.0570840811088829"	""	"0.001211"	"0.01498"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QECLDSR"	"[R].qEcLDSR.[F]"	"N-Term(TMT6plex); C3(Methylthio)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"563.26495"	"1125.52263"	"1125.52300"	"-0.32"	"-0.00018"	"5/68"	"5"	"68"	"2206658.68682861"	"HCD"	"MS2"	"37.46706"	"129.2"	"100.000"	"37.1553"	"10116"	"10116"	"10090"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"215.8"	""	"154.2"	""	"171.6"	""	"183.0"	""	"239.9"	"264.2"	""	"246"	"18"	"30.000"	"23.000"	"0.210331883756105"	"21"	"0.007339"	"0.08425"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYPYSPR"	"[K].nYPYSPR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7Q1"	"BRISC and BRCA1-A complex member 2 OS=Rattus norvegicus OX=10116 GN=Babam2 PE=1 SV=1"	"Q6P7Q1"	"BRISC and BRCA1-A complex member 2 OS=Rattus norvegicus OX=10116 GN=Babam2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"563.29645"	"1125.58562"	"1125.58902"	"-3.03"	"-0.00170"	"4/60"	"4"	"60"	"1548545.77850342"	"HCD"	"MS2"	"62.49448"	"110.3"	"100.000"	"35.5033"	"9440"	"9440"	"9410"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"161.6"	""	"158.3"	""	"156.8"	""	"186.4"	""	"192.6"	"189.5"	""	"494"	"18"	"33.000"	"26.000"	"0.410862924641432"	"14"	"0.005067"	"0.05734"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYPYSPR"	"[K].nYPYSPR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7Q1"	"BRISC and BRCA1-A complex member 2 OS=Rattus norvegicus OX=10116 GN=Babam2 PE=1 SV=1"	"Q6P7Q1"	"BRISC and BRCA1-A complex member 2 OS=Rattus norvegicus OX=10116 GN=Babam2 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"563.29773"	"1125.58818"	"1125.58902"	"-0.75"	"-0.00042"	"4/60"	"4"	"60"	"1686128.30993652"	"HCD"	"MS2"	"8.539812"	"112.7"	"100.000"	"35.7858"	"9554"	"9554"	"9537"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"185.5"	""	"158.4"	""	"144.3"	""	"182.2"	"1.2"	"209.9"	"185.5"	""	"513"	"19"	"34.000"	"27.000"	"0.360651189939323"	"18"	"0.006958"	"0.0804"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGSVDSR"	"[K].yLGSVDSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"O88588"	"Phosphofurin acidic cluster sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Pacs1 PE=1 SV=1"	"O88588"	"Phosphofurin acidic cluster sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Pacs1 PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"563.30823"	"1125.60918"	"1125.61015"	"-0.87"	"-0.00049"	"5/62"	"5"	"62"	"2361056.73583984"	"HCD"	"MS2"	"38.03273"	"124.7"	"100.000"	"41.9184"	"12050"	"12050"	"12028"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"169.3"	""	"140.1"	""	"169.7"	""	"193.1"	""	"252.6"	"260.0"	""	"494"	"23"	"33.000"	"26.000"	"0.111608418260606"	"18"	"0.002973"	"0.03037"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGSVDSR"	"[K].yLGSVDSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"O88588"	"Phosphofurin acidic cluster sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Pacs1 PE=1 SV=1"	"O88588"	"Phosphofurin acidic cluster sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Pacs1 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"563.30920"	"1125.61113"	"1125.61015"	"0.87"	"0.00049"	"5/62"	"5"	"62"	"2385999.62548828"	"HCD"	"MS2"	"36.58337"	"121.9"	"100.000"	"42.0845"	"12108"	"12108"	"12081"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"158.8"	""	"145.5"	""	"166.7"	""	"186.1"	""	"244.6"	"257.1"	""	"513"	"25"	"34.000"	"27.000"	"0.0755244149069382"	"20"	"0.001211"	"0.01417"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADVHEVR"	"[K].aADVHEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"563.31403"	"1125.62078"	"1125.62139"	"-0.54"	"-0.00031"	"10/62"	"10"	"62"	"3068622.9810791"	"HCD"	"MS2"	"20.99298"	"192.1"	"100.000"	"21.6696"	"3848"	"3848"	"3831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"255.0"	""	"201.4"	""	"242.2"	""	"372.3"	"0.3"	"381.1"	"370.4"	""	"497"	"11"	"33.000"	"26.000"	"1.85492516464902"	"15"	"0.002973"	"0.0287"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADVHEVR"	"[K].aADVHEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"563.31409"	"1125.62090"	"1125.62139"	"-0.44"	"-0.00025"	"4/62"	"4"	"62"	"3214851.15533447"	"HCD"	"MS2"	"18.74754"	"195.7"	"100.000"	"21.7225"	"3852"	"3852"	"3829"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"267.3"	""	"233.6"	""	"224.9"	""	"361.5"	"4.6"	"390.7"	"373.9"	""	"497"	"13"	"33.000"	"26.000"	"1.14110706189962"	"18"	"0.001546"	"0.01872"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVIHVTR"	"[K].gDVIHVTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O55043"	"Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"O55043"	"Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"375.89026"	"1125.65622"	"1125.65777"	"-1.38"	"-0.00052"	"5/66"	"5"	"66"	"1919104.74401855"	"HCD"	"MS2"	"36.21828"	"80.4"	"100.000"	"31.0519"	"7641"	"7641"	"7624"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"106.0"	""	"108.9"	""	"113.6"	""	"120.2"	"1.4"	"151.7"	"160.4"	""	"363"	"20"	"32.000"	"25.000"	"0.172137951089113"	""	"0.001812"	"0.0207"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SQTSMGMR"	"[R].sQTSMGMR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6Q9"	"Calcium uptake protein 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Micu1 PE=2 SV=1"	"Q6P6Q9"	"Calcium uptake protein 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Micu1 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"563.78052"	"1126.55376"	"1126.55463"	"-0.77"	"-0.00044"	"7/74"	"7"	"74"	"1060610.50158691"	"HCD"	"MS2"	"0"	"64.3"	"100.000"	"25.3350"	"5310"	"5310"	"5286"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.2"	""	"73.4"	""	"75.7"	""	"122.9"	""	"133.3"	"124.9"	""	"338"	"10"	"32.000"	"25.000"	"1.62512475046839"	"15"	"0.008668"	"0.1088"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].LHVDPENFR.[L]"	""	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"376.19235"	"1126.56250"	"1126.56398"	"-1.31"	"-0.00049"	"8/72"	"8"	"72"	"4439367.46240234"	"HCD"	"MS2"	"14.50732"	"52.3"	"100.000"	"37.3126"	"10174"	"10174"	"10157"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.5"	""	"61.5"	""	"83.3"	""	"90.1"	"0.5"	"97.0"	"104.3"	"NoQuanLabels"	"401"	"23"	"33.000"	"26.000"	"0.110436943129283"	"14"	"0.002973"	"0.02928"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].LHVDPENFR.[L]"	""	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"376.19235"	"1126.56250"	"1126.56398"	"-1.31"	"-0.00049"	"9/72"	"9"	"72"	"5437273.82006836"	"HCD"	"MS2"	"11.51851"	"47.4"	"100.000"	"37.0935"	"10091"	"10091"	"10074"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.2"	""	"65.3"	""	"71.7"	""	"71.8"	""	"93.6"	"91.4"	"NoQuanLabels"	"401"	"23"	"33.000"	"26.000"	"0.0953047128015324"	"14"	"0.003358"	"0.03236"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].LHVDPENFR.[L]"	""	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"376.19244"	"1126.56278"	"1126.56398"	"-1.07"	"-0.00040"	"8/72"	"8"	"72"	"5544227.32574463"	"HCD"	"MS2"	"17.28322"	"38.3"	"100.000"	"36.5141"	"9854"	"9854"	"9839"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.2"	""	"53.1"	""	"59.8"	""	"53.7"	"1.2"	"64.9"	"72.3"	"NoQuanLabels"	"416"	"26"	"33.000"	"26.000"	"0.0522472377753992"	"15"	"0.005829"	"0.06494"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].LHVDPENFR.[L]"	""	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"563.78528"	"1126.56328"	"1126.56398"	"-0.62"	"-0.00035"	"5/72"	"5"	"72"	"6116431.91522217"	"HCD"	"MS2"	"5.774797"	"54.0"	"100.000"	"36.9507"	"10032"	"10032"	"10013"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.7"	""	"74.1"	""	"76.1"	""	"72.3"	""	"108.2"	"102.8"	"NoQuanLabels"	"416"	"34"	"33.000"	"26.000"	"0.00875111387039644"	"16"	"0.002973"	"0.03007"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].LHVDPENFR.[L]"	""	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"376.19263"	"1126.56333"	"1126.56398"	"-0.58"	"-0.00022"	"8/72"	"8"	"72"	"43816431.6394043"	"HCD"	"MS2"	"1.579691"	"5.5"	"17.245"	"37.0093"	"10051"	"10051"	"10034"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.4"	""	"8.1"	""	"6.2"	""	"9.9"	""	"9.0"	"14.0"	"NoQuanLabels"	"415"	"24"	"33.000"	"26.000"	"0.0790711583542079"	"15"	"0.003967"	"0.04196"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].LHVDPENFR.[L]"	""	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"376.19278"	"1126.56379"	"1126.56398"	"-0.18"	"-0.00007"	"8/72"	"8"	"72"	"6224702.94549561"	"HCD"	"MS2"	"11.21081"	"40.9"	"100.000"	"36.7102"	"9928"	"9928"	"9912"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.5"	""	"52.8"	""	"69.4"	""	"63.2"	"1.8"	"77.1"	"70.0"	"NoQuanLabels"	"415"	"27"	"33.000"	"26.000"	"0.0413064717839841"	"18"	"0.004942"	"0.05452"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].LHVDPENFR.[L]"	""	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"563.78571"	"1126.56413"	"1126.56398"	"0.13"	"0.00008"	"5/72"	"5"	"72"	"6200288.10748291"	"HCD"	"MS2"	"6.584247"	"49.1"	"100.000"	"37.1197"	"10096"	"10096"	"10080"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"82.1"	""	"69.5"	""	"67.9"	""	"74.4"	""	"93.1"	"80.2"	"NoQuanLabels"	"413"	"37"	"33.000"	"26.000"	"0.00405433897166644"	"16"	"0.000936"	"0.0124"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].LHVDPENFR.[L]"	""	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"563.78571"	"1126.56413"	"1126.56398"	"0.13"	"0.00008"	"5/72"	"5"	"72"	"7321780.06091309"	"HCD"	"MS2"	"15.50357"	"47.4"	"100.000"	"36.6545"	"9911"	"9911"	"9891"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.8"	""	"62.7"	""	"66.9"	""	"63.9"	"2.2"	"85.2"	"71.6"	"NoQuanLabels"	"413"	"34"	"33.000"	"26.000"	"0.00736071590525195"	"15"	"0.001635"	"0.01986"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].LHVDPENFR.[L]"	""	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"563.78589"	"1126.56450"	"1126.56398"	"0.46"	"0.00026"	"5/72"	"5"	"72"	"6869752.54693604"	"HCD"	"MS2"	"9.80352"	"44.7"	"100.000"	"36.8299"	"9977"	"9977"	"9956"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.5"	""	"62.0"	""	"69.3"	""	"60.4"	"2.5"	"76.0"	"73.9"	"NoQuanLabels"	"411"	"34"	"33.000"	"26.000"	"0.0086260471210152"	"15"	"0.0023"	"0.02318"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYLSSER"	"[K].sGYLSSER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"564.29504"	"1127.58281"	"1127.58942"	"-5.86"	"-0.00330"	"6/68"	"6"	"68"	"11214326.0169067"	"HCD"	"MS2"	"22.85986"	"509.5"	"100.000"	"30.6093"	"7453"	"7453"	"7434"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"771.8"	""	"647.8"	""	"719.8"	""	"806.4"	""	"849.0"	"1034.5"	""	"414"	"32"	"33.000"	"26.000"	"0.0133343037961642"	"19"	"0.0008629"	"0.01086"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYLSSER"	"[K].sGYLSSER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"564.29565"	"1127.58403"	"1127.58942"	"-4.78"	"-0.00269"	"6/68"	"6"	"68"	"12644229.3202515"	"HCD"	"MS2"	"8.194412"	"581.5"	"100.000"	"30.5839"	"7455"	"7455"	"7442"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"888.0"	""	"723.8"	""	"835.6"	""	"951.5"	""	"968.0"	"1137.8"	""	"416"	"33"	"33.000"	"26.000"	"0.0101873994428637"	"19"	"0.000936"	"0.01136"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYLSSER"	"[K].sGYLSSER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"564.29645"	"1127.58562"	"1127.58942"	"-3.37"	"-0.00190"	"6/68"	"6"	"68"	"5837962.35198975"	"HCD"	"MS2"	"1.725016"	"309.5"	"100.000"	"30.9028"	"7570"	"7570"	"7552"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"415.8"	""	"344.9"	""	"418.6"	""	"504.1"	""	"581.9"	"676.9"	""	"431"	"30"	"33.000"	"26.000"	"0.0221537512246255"	"22"	"0.001211"	"0.01506"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYLSSER"	"[K].sGYLSSER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"564.29657"	"1127.58586"	"1127.58942"	"-3.15"	"-0.00178"	"6/68"	"6"	"68"	"4917530.70935059"	"HCD"	"MS2"	"3.376679"	"285.5"	"100.000"	"30.8887"	"7576"	"7576"	"7558"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"383.1"	""	"339.8"	""	"362.5"	""	"450.4"	""	"565.2"	"612.7"	""	"429"	"28"	"33.000"	"26.000"	"0.0305089524837845"	"22"	"0.000936"	"0.01334"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPYYATR"	"[R].qPYYATR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"564.30511"	"1127.60295"	"1127.60467"	"-1.53"	"-0.00086"	"4/60"	"4"	"60"	"5547698.03564453"	"HCD"	"MS2"	"20.11727"	"265.3"	"100.000"	"30.4920"	"7417"	"7417"	"7394"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"409.1"	""	"301.1"	""	"429.6"	""	"413.2"	""	"399.8"	"563.0"	""	"412"	"13"	"33.000"	"26.000"	"0.995101132201932"	"19"	"0.009021"	"0.116"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPYYATR"	"[R].qPYYATR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"564.30554"	"1127.60381"	"1127.60467"	"-0.77"	"-0.00043"	"6/60"	"6"	"60"	"5686468.42181396"	"HCD"	"MS2"	"25.30665"	"275.7"	"100.000"	"30.5360"	"7423"	"7423"	"7402"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"418.9"	""	"327.8"	""	"422.2"	""	"420.8"	""	"425.6"	"599.0"	""	"450"	"14"	"33.000"	"26.000"	"0.922959231719865"	"23"	"0.008522"	"0.1051"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GHTNQVSR"	"[K].gHTNQVSR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.30927"	"1127.61125"	"1127.61189"	"-0.56"	"-0.00032"	"3/72"	"3"	"72"	"302209.780517578"	"HCD"	"MS2"	"10.70136"	"18.4"	"100.000"	"18.5436"	"2599"	"2599"	"2579"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.4"	""	"27.0"	""	"24.9"	""	"25.2"	""	"30.8"	"35.0"	""	"507"	"10"	"34.000"	"27.000"	"2.42090620556434"	"13"	"0.008668"	"0.1092"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGAQDGVR"	"[R].vPGAQDGVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"564.32202"	"1127.63677"	"1127.63704"	"-0.24"	"-0.00014"	"10/72"	"10"	"72"	"6361801.25476074"	"HCD"	"MS2"	"2.562164"	"162.7"	"100.000"	"32.5404"	"8245"	"8245"	"8227"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"214.3"	""	"239.7"	""	"255.5"	""	"219.6"	""	"266.1"	"347.7"	""	"407"	"34"	"33.000"	"26.000"	"0.00823311939604295"	""	"0"	"0.0008191"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGAQDGVR"	"[R].vPGAQDGVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"564.32220"	"1127.63713"	"1127.63704"	"0.08"	"0.00005"	"11/72"	"11"	"72"	"6682708.51727295"	"HCD"	"MS2"	"9.428061"	"173.9"	"100.000"	"32.5753"	"8253"	"8253"	"8227"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"239.5"	""	"264.1"	""	"266.8"	""	"242.4"	""	"282.5"	"351.9"	""	"400"	"36"	"33.000"	"26.000"	"0.00473183939497152"	""	"0"	"0.0003791"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGAQDGVR"	"[R].vPGAQDGVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"564.32245"	"1127.63762"	"1127.63704"	"0.52"	"0.00029"	"12/72"	"12"	"72"	"1776284.34368896"	"HCD"	"MS2"	"4.704275"	"77.3"	"100.000"	"32.8923"	"8382"	"8382"	"8360"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"85.2"	""	"96.0"	""	"100.4"	""	"150.0"	"0.5"	"158.3"	"143.0"	""	"400"	"23"	"33.000"	"26.000"	"0.0972814411382923"	"20"	"0.003449"	"0.03505"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGAQDGVR"	"[R].vPGAQDGVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"564.32251"	"1127.63774"	"1127.63704"	"0.63"	"0.00035"	"11/72"	"11"	"72"	"2151159.53735352"	"HCD"	"MS2"	"0"	"83.3"	"100.000"	"32.8392"	"8366"	"8366"	"8350"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"106.3"	""	"94.3"	""	"112.6"	""	"155.8"	""	"144.4"	"176.9"	""	"400"	"29"	"33.000"	"26.000"	"0.0281209504825983"	"21"	"0"	"0.0007892"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNGTGGK"	"[R].hnGTGGk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"377.21655"	"1129.63510"	"1129.63659"	"-1.32"	"-0.00050"	"5/58"	"5"	"58"	"10954725.3208008"	"HCD"	"MS2"	"11.15405"	"331.5"	"39.646"	"19.5221"	"2991"	"2991"	"2979"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"417.8"	""	"369.7"	""	"421.2"	""	"668.8"	""	"649.2"	"624.1"	""	"567"	"22"	"34.000"	"27.000"	"0.180531530177394"	"14"	"0.005874"	"0.06603"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNGTGGK"	"[R].hnGTGGk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"565.32123"	"1129.63518"	"1129.63659"	"-1.25"	"-0.00071"	"6/58"	"6"	"58"	"11767188.9458008"	"HCD"	"MS2"	"0"	"732.7"	"100.000"	"19.3656"	"2934"	"2934"	"2928"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1124.8"	""	"747.9"	""	"839.4"	""	"1307.8"	""	"1468.0"	"1474.4"	""	"567"	"21"	"34.000"	"27.000"	"0.20632557458619"	"14"	"0.007872"	"0.09628"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNGTGGK"	"[R].hnGTGGk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"565.32153"	"1129.63579"	"1129.63659"	"-0.71"	"-0.00040"	"6/58"	"6"	"58"	"6826016.14575195"	"HCD"	"MS2"	"0"	"444.8"	"100.000"	"19.4603"	"2966"	"2966"	"2952"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"696.5"	""	"484.1"	""	"518.3"	""	"775.4"	""	"879.9"	"876.8"	""	"567"	"23"	"34.000"	"27.000"	"0.156153981930932"	"14"	"0.005829"	"0.06489"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNGTGGK"	"[R].hnGTGGk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"377.21686"	"1129.63602"	"1129.63659"	"-0.51"	"-0.00019"	"7/58"	"7"	"58"	"1763967.36004639"	"HCD"	"MS2"	"15.59896"	"136.2"	"100.000"	"18.9066"	"2751"	"2751"	"2738"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"155.2"	""	"135.9"	""	"189.1"	""	"362.1"	""	"224.6"	"230.7"	""	"569"	"14"	"34.000"	"27.000"	"1.07419288318281"	"13"	"0.003507"	"0.0365"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNGTGGK"	"[R].hnGTGGk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"377.21704"	"1129.63657"	"1129.63659"	"-0.02"	"-0.00001"	"4/58"	"4"	"58"	"1962046.02545166"	"HCD"	"MS2"	"11.07086"	"146.7"	"100.000"	"18.9349"	"2758"	"2758"	"2743"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"153.8"	""	"142.0"	""	"201.8"	""	"379.6"	"1.8"	"262.2"	"249.1"	""	"571"	"17"	"34.000"	"27.000"	"0.513577646269269"	"15"	"0.003922"	"0.04037"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNGTGGK"	"[R].hnGTGGk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"565.32239"	"1129.63750"	"1129.63659"	"0.80"	"0.00045"	"6/58"	"6"	"58"	"997978.408996582"	"HCD"	"MS2"	"0"	"94.2"	"100.000"	"18.8881"	"2743"	"2743"	"2728"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"121.8"	""	"108.5"	""	"109.3"	""	"165.5"	""	"194.9"	"195.3"	""	"565"	"25"	"34.000"	"27.000"	"0.0835638521800813"	"14"	"0.003449"	"0.03313"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNGTGGK"	"[R].hnGTGGk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"565.32245"	"1129.63762"	"1129.63659"	"0.91"	"0.00051"	"6/58"	"6"	"58"	"915200.03515625"	"HCD"	"MS2"	"0"	"84.5"	"100.000"	"18.9185"	"2752"	"2752"	"2727"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"108.8"	""	"89.9"	""	"112.5"	""	"142.6"	""	"176.8"	"178.6"	""	"565"	"25"	"34.000"	"27.000"	"0.0937601842586126"	"14"	"0.002711"	"0.02595"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSDDVLR"	"[K].vPSDDVLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63184"	"Interferon-induced, double-stranded RNA-activated protein kinase OS=Rattus norvegicus OX=10116 GN=Eif2ak2 PE=1 SV=1"	"Q63184"	"Interferon-induced, double-stranded RNA-activated protein kinase OS=Rattus norvegicus OX=10116 GN=Eif2ak2 PE=1 SV=1"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"565.32373"	"1129.64018"	"1129.64145"	"-1.12"	"-0.00063"	"9/60"	"9"	"60"	"2216044.63818359"	"HCD"	"MS2"	"10.201"	"78.3"	"100.000"	"52.6959"	"16425"	"16425"	"16407"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"111.6"	""	"98.7"	""	"98.0"	""	"139.4"	"1.5"	"151.2"	"141.4"	""	"552"	"31"	"34.000"	"27.000"	"0.0206019857321178"	"27"	"0.0002479"	"0.005453"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVPDSDVR"	"[R].lVPDSDVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"565.32373"	"1129.64018"	"1129.64145"	"-1.12"	"-0.00063"	"5/60"	"5"	"60"	"3172411.42529297"	"HCD"	"MS2"	"6.179532"	"117.8"	"100.000"	"47.3047"	"14227"	"14227"	"14209"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"181.3"	""	"160.0"	""	"151.2"	""	"194.8"	"1.2"	"214.6"	"212.7"	""	"552"	"29"	"34.000"	"27.000"	"0.0380109813414729"	"21"	"0.007627"	"0.09126"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPESALR"	"[K].dLPESALR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"565.32379"	"1129.64031"	"1129.64145"	"-1.02"	"-0.00057"	"6/64"	"6"	"64"	"1105022.80084229"	"HCD"	"MS2"	"26.97528"	"58.0"	"100.000"	"50.8730"	"15682"	"15682"	"15662"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.7"	""	"66.9"	""	"76.1"	""	"95.4"	"3.7"	"113.4"	"102.6"	""	"548"	"32"	"34.000"	"27.000"	"0.016624575430725"	"27"	"0"	"0.003134"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSDDVLR"	"[K].vPSDDVLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63184"	"Interferon-induced, double-stranded RNA-activated protein kinase OS=Rattus norvegicus OX=10116 GN=Eif2ak2 PE=1 SV=1"	"Q63184"	"Interferon-induced, double-stranded RNA-activated protein kinase OS=Rattus norvegicus OX=10116 GN=Eif2ak2 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"565.32397"	"1129.64067"	"1129.64145"	"-0.69"	"-0.00039"	"7/60"	"7"	"60"	"2224341.890625"	"HCD"	"MS2"	"9.00304"	"79.1"	"100.000"	"52.4008"	"16316"	"16316"	"16299"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.9"	""	"99.2"	""	"109.5"	""	"142.1"	""	"146.1"	"143.6"	""	"548"	"28"	"34.000"	"27.000"	"0.0486127917763905"	"26"	"0.0003538"	"0.007354"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVPDSDVR"	"[R].lVPDSDVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"565.32410"	"1129.64092"	"1129.64145"	"-0.48"	"-0.00027"	"5/60"	"5"	"60"	"4902282.0090332"	"HCD"	"MS2"	"17.70305"	"166.6"	"100.000"	"47.1144"	"14161"	"14161"	"14142"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"247.5"	""	"219.4"	""	"225.1"	""	"271.4"	"0.5"	"324.0"	"290.9"	""	"548"	"29"	"34.000"	"27.000"	"0.0376487501153429"	"21"	"0.005427"	"0.06248"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPESALR"	"[K].dLPESALR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"565.32416"	"1129.64104"	"1129.64145"	"-0.37"	"-0.00021"	"6/64"	"6"	"64"	"5164765.7689209"	"HCD"	"MS2"	"2.76088"	"183.4"	"100.000"	"51.1786"	"15817"	"15817"	"15799"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"295.6"	""	"235.4"	""	"252.0"	""	"299.9"	""	"314.5"	"339.2"	""	"545"	"40"	"34.000"	"27.000"	"0.00247381094473555"	""	"0"	"0.003655"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPESALR"	"[K].dLPESALR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"565.32428"	"1129.64128"	"1129.64145"	"-0.15"	"-0.00009"	"6/64"	"6"	"64"	"4958690.63745117"	"HCD"	"MS2"	"2.361205"	"189.6"	"100.000"	"51.5249"	"15948"	"15948"	"15931"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"308.5"	""	"223.0"	""	"249.3"	""	"317.7"	""	"346.2"	"353.0"	""	"543"	"36"	"34.000"	"27.000"	"0.00616268307286458"	"27"	"0.0002479"	"0.00569"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPESALR"	"[K].dLPESALR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"565.32440"	"1129.64153"	"1129.64145"	"0.06"	"0.00004"	"7/64"	"7"	"64"	"1444086.31817627"	"HCD"	"MS2"	"0"	"73.3"	"100.000"	"50.5661"	"15568"	"15568"	"15543"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"116.9"	""	"103.0"	""	"87.9"	""	"124.6"	"0.2"	"132.5"	"128.5"	""	"571"	"32"	"34.000"	"27.000"	"0.0190373332610489"	""	"0.0001301"	"0.004621"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPESALR"	"[K].dLPESALR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.5161"	"0.0000"	"1"	"1"	"1"	"565.32440"	"1129.64153"	"1129.64145"	"0.06"	"0.00004"	"9/64"	"9"	"64"	"2459561.10144043"	"HCD"	"MS2"	"30.09603"	"119.3"	"100.000"	"51.4923"	"15945"	"15945"	"15925"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"169.4"	""	"137.5"	""	"130.6"	""	"243.3"	"1.2"	"220.2"	"229.1"	""	"571"	"31"	"34.000"	"27.000"	"0.0237468556649813"	""	"0"	"0.003334"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPESALR"	"[K].dLPESALR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"565.32458"	"1129.64189"	"1129.64145"	"0.39"	"0.00022"	"11/64"	"11"	"64"	"1966256.57830811"	"HCD"	"MS2"	"29.28789"	"103.9"	"100.000"	"51.8565"	"16083"	"16083"	"16059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"132.0"	""	"116.9"	""	"130.3"	""	"215.9"	""	"176.8"	"215.0"	""	"573"	"28"	"34.000"	"27.000"	"0.0453027563250965"	""	"0.0001301"	"0.005003"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNAELQAR"	"[R].vNAELQAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"565.32971"	"1129.65215"	"1129.65269"	"-0.48"	"-0.00027"	"6/68"	"6"	"68"	"3261472.69067383"	"HCD"	"MS2"	"28.48425"	"163.0"	"100.000"	"36.0930"	"9679"	"9679"	"9669"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"228.2"	""	"192.9"	""	"201.9"	""	"259.5"	""	"326.3"	"342.2"	""	"522"	"29"	"34.000"	"27.000"	"0.0328579532478277"	"21"	"0.0003538"	"0.006225"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNAELQAR"	"[R].vNAELQAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"565.32977"	"1129.65227"	"1129.65269"	"-0.37"	"-0.00021"	"6/68"	"6"	"68"	"4037666.93035889"	"HCD"	"MS2"	"19.20092"	"198.3"	"100.000"	"35.9927"	"9643"	"9643"	"9625"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"281.0"	""	"228.4"	""	"246.3"	""	"296.5"	""	"390.6"	"443.6"	""	"522"	"29"	"34.000"	"27.000"	"0.0346449953467462"	"22"	"0.0006732"	"0.008381"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSGPPAK"	"[R].dSGPPAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9EPJ0"	"Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Rattus norvegicus OX=10116 GN=Nucks1 PE=1 SV=1"	"Q9EPJ0"	"Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Rattus norvegicus OX=10116 GN=Nucks1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"565.33362"	"1129.65996"	"1129.66174"	"-1.58"	"-0.00089"	"10/50"	"10"	"50"	"2072957.21813965"	"HCD"	"MS2"	"0"	"157.0"	"100.000"	"26.9341"	"5974"	"5974"	"5958"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"225.0"	""	"174.2"	""	"190.0"	""	"293.8"	""	"294.2"	"315.4"	""	"521"	"28"	"34.000"	"27.000"	"0.041286467663612"	"26"	"0.003967"	"0.041"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSGPPAK"	"[R].dSGPPAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9EPJ0"	"Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Rattus norvegicus OX=10116 GN=Nucks1 PE=1 SV=1"	"Q9EPJ0"	"Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Rattus norvegicus OX=10116 GN=Nucks1 PE=1 SV=1"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"565.33398"	"1129.66069"	"1129.66174"	"-0.93"	"-0.00053"	"10/50"	"10"	"50"	"1975871.2300415"	"HCD"	"MS2"	"0"	"153.2"	"100.000"	"27.0035"	"5986"	"5986"	"5968"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"205.4"	""	"165.5"	""	"174.9"	""	"297.4"	""	"315.3"	"296.1"	""	"549"	"28"	"34.000"	"27.000"	"0.0429084027904942"	""	"0.004022"	"0.04357"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLAEEIR"	"[R].iGLAEEIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"565.34216"	"1129.67705"	"1129.67784"	"-0.70"	"-0.00039"	"6/58"	"6"	"58"	"1303541.75048828"	"HCD"	"MS2"	"13.9014"	"57.7"	"100.000"	"67.4141"	"22374"	"22374"	"22354"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.3"	""	"69.3"	""	"88.1"	""	"94.6"	""	"100.1"	"114.2"	""	"545"	"28"	"34.000"	"27.000"	"0.0385803805038305"	""	"0.0004639"	"0.007969"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLAEEIR"	"[R].iGLAEEIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.1481"	"0.0000"	"1"	"1"	"1"	"565.34222"	"1129.67717"	"1129.67784"	"-0.59"	"-0.00033"	"9/58"	"9"	"58"	"1266421.02685547"	"HCD"	"MS2"	"11.06065"	"57.5"	"100.000"	"67.5439"	"22442"	"22442"	"22424"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.5"	""	"67.7"	""	"81.4"	""	"91.0"	""	"93.4"	"128.0"	""	"545"	"27"	"34.000"	"27.000"	"0.059206107124037"	""	"0.0002479"	"0.005237"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLAEEIR"	"[R].iGLAEEIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"565.34241"	"1129.67754"	"1129.67784"	"-0.27"	"-0.00015"	"6/58"	"6"	"58"	"850374.171081543"	"HCD"	"MS2"	"10.52748"	"40.5"	"100.000"	"67.7189"	"22498"	"22498"	"22478"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.0"	""	"43.3"	""	"62.8"	""	"58.7"	"0.1"	"68.8"	"89.6"	""	"540"	"28"	"34.000"	"27.000"	"0.0421079175763277"	"25"	"0.0006732"	"0.008934"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLAEEIR"	"[R].iGLAEEIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"565.34259"	"1129.67790"	"1129.67784"	"0.06"	"0.00003"	"6/58"	"6"	"58"	"770278.673706055"	"HCD"	"MS2"	"21.03022"	"36.2"	"100.000"	"67.2279"	"22314"	"22314"	"22284"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"62.0"	""	"38.9"	""	"51.4"	""	"58.7"	"0.4"	"58.7"	"72.7"	""	"611"	"23"	"34.000"	"27.000"	"0.142236551571264"	"27"	"0.0007829"	"0.009344"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVAGEDAR"	"[R].lAVAGEDAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"565.82147"	"1130.63567"	"1130.63670"	"-0.92"	"-0.00052"	"7/66"	"7"	"66"	"5223679.00817871"	"HCD"	"MS2"	"50.62062"	"267.8"	"100.000"	"38.9998"	"10862"	"10862"	"10844"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"370.8"	""	"348.2"	""	"364.0"	""	"412.9"	""	"522.3"	"528.1"	""	"570"	"40"	"34.000"	"27.000"	"0.00269677590989251"	"25"	"0"	"0.0002316"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVAGEDAR"	"[R].lAVAGEDAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"565.82147"	"1130.63567"	"1130.63670"	"-0.92"	"-0.00052"	"7/66"	"7"	"66"	"5400065.49456787"	"HCD"	"MS2"	"49.54166"	"258.4"	"100.000"	"39.1957"	"10933"	"10933"	"10915"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"389.1"	""	"329.1"	""	"324.8"	""	"414.1"	""	"480.7"	"516.3"	""	"570"	"40"	"34.000"	"27.000"	"0.00279798163760696"	"23"	"0"	"0.0002442"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANPADGK"	"[R].aNPADGk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"565.83136"	"1130.65544"	"1130.65699"	"-1.37"	"-0.00078"	"6/58"	"6"	"58"	"6756763.79125977"	"HCD"	"MS2"	"2.174458"	"420.6"	"100.000"	"26.4384"	"5772"	"5772"	"5754"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"628.4"	""	"550.7"	""	"567.5"	""	"694.8"	""	"694.7"	"852.8"	""	"750"	"33"	"35.000"	"28.000"	"0.0180730424109423"	"28"	"0.003967"	"0.04248"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANPADGK"	"[R].aNPADGk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"565.83148"	"1130.65569"	"1130.65699"	"-1.16"	"-0.00065"	"6/58"	"6"	"58"	"6368458.39910889"	"HCD"	"MS2"	"3.118193"	"401.3"	"100.000"	"26.5124"	"5786"	"5786"	"5763"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"564.0"	"3.3"	"504.9"	""	"552.3"	""	"657.7"	""	"707.5"	"815.8"	""	"750"	"36"	"35.000"	"28.000"	"0.00843395477188419"	"23"	"0.003449"	"0.03297"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASTKPLSR"	"[M].aSTkPLSR.[F]"	"N-Term(Prot)(Acetyl); K4(TMT6plex)"	"1"	"1"	"Q6AYQ8"	"Acylpyruvase FAHD1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fahd1 PE=1 SV=1"	"Q6AYQ8"	"Acylpyruvase FAHD1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fahd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"565.83978"	"1130.67229"	"1130.67309"	"-0.71"	"-0.00040"	"6/74"	"6"	"74"	"3587207.44244385"	"HCD"	"MS2"	"0"	"160.8"	"100.000"	"29.7395"	"7099"	"7099"	"7079"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"276.5"	""	"250.1"	""	"267.9"	""	"228.0"	"0.3"	"239.9"	"255.4"	""	"731"	"14"	"35.000"	"28.000"	"1.41868958769582"	"20"	"0.004867"	"0.05152"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASTKPLSR"	"[M].aSTkPLSR.[F]"	"N-Term(Prot)(Acetyl); K4(TMT6plex)"	"1"	"1"	"Q6AYQ8"	"Acylpyruvase FAHD1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fahd1 PE=1 SV=1"	"Q6AYQ8"	"Acylpyruvase FAHD1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fahd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"565.84003"	"1130.67278"	"1130.67309"	"-0.28"	"-0.00016"	"6/74"	"6"	"74"	"3583941.01556396"	"HCD"	"MS2"	"0"	"167.2"	"100.000"	"29.7046"	"7097"	"7097"	"7073"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"283.7"	""	"275.4"	""	"281.4"	""	"219.5"	""	"249.0"	"273.3"	""	"731"	"12"	"35.000"	"28.000"	"2.1226939460404"	"19"	"0.003449"	"0.03566"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGTLVAER"	"[R].rGTLVAER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"1"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"1"	"565.84509"	"1130.68291"	"1130.68432"	"-1.25"	"-0.00071"	"5/78"	"5"	"78"	"3561660.81005859"	"HCD"	"MS2"	"0"	"76.3"	"100.000"	"22.1124"	"4009"	"4009"	"3982"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"113.9"	""	"104.6"	""	"104.5"	""	"121.7"	"3.3"	"142.6"	"132.3"	""	"707"	"18"	"35.000"	"28.000"	"0.582625405404268"	""	"0.008478"	"0.1042"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADINQWR"	"[K].aDINQWR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P21588"	"5'-nucleotidase OS=Rattus norvegicus OX=10116 GN=Nt5e PE=1 SV=1"	"P21588"	"5'-nucleotidase OS=Rattus norvegicus OX=10116 GN=Nt5e PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"566.30890"	"1131.61052"	"1131.61082"	"-0.27"	"-0.00015"	"5/54"	"5"	"54"	"780691.322998047"	"HCD"	"MS2"	"25.10504"	"49.5"	"100.000"	"50.7122"	"15617"	"15617"	"15592"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.8"	""	"45.8"	""	"59.1"	""	"99.2"	"0.2"	"107.0"	"113.9"	""	"725"	"18"	"35.000"	"28.000"	"0.539893390670207"	"20"	"0.004942"	"0.05492"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VISPSEDR"	"[K].vISPSEDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05696"	"Protein kinase C alpha type OS=Rattus norvegicus OX=10116 GN=Prkca PE=1 SV=3"	"P05696"	"Protein kinase C alpha type OS=Rattus norvegicus OX=10116 GN=Prkca PE=1 SV=3"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"566.31348"	"1131.61968"	"1131.62072"	"-0.92"	"-0.00052"	"5/64"	"5"	"64"	"2662779.36029053"	"HCD"	"MS2"	"31.37781"	"139.4"	"100.000"	"32.9314"	"8398"	"8398"	"8372"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"208.5"	""	"156.0"	""	"184.9"	""	"228.7"	""	"278.3"	"266.6"	""	"710"	"25"	"35.000"	"28.000"	"0.119186853056249"	"18"	"0.003967"	"0.04205"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTGQAEAR"	"[K].gLTGQAEAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32Q05"	"Ubiquitin thioesterase OTU1 OS=Rattus norvegicus OX=10116 GN=Yod1 PE=2 SV=1"	"Q32Q05"	"Ubiquitin thioesterase OTU1 OS=Rattus norvegicus OX=10116 GN=Yod1 PE=2 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"566.32013"	"1131.63298"	"1131.63195"	"0.91"	"0.00052"	"7/80"	"7"	"80"	"2085268.26501465"	"HCD"	"MS2"	"19.2522"	"114.1"	"100.000"	"25.7092"	"5462"	"5462"	"5438"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"182.3"	""	"143.8"	""	"170.0"	""	"180.1"	"1.9"	"200.9"	"200.6"	""	"758"	"36"	"35.000"	"28.000"	"0.00947630892082947"	""	"0.0001301"	"0.004709"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTGQAEAR"	"[K].gLTGQAEAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32Q05"	"Ubiquitin thioesterase OTU1 OS=Rattus norvegicus OX=10116 GN=Yod1 PE=2 SV=1"	"Q32Q05"	"Ubiquitin thioesterase OTU1 OS=Rattus norvegicus OX=10116 GN=Yod1 PE=2 SV=1"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"566.32013"	"1131.63298"	"1131.63195"	"0.91"	"0.00052"	"7/80"	"7"	"80"	"2191195.90124512"	"HCD"	"MS2"	"27.15162"	"118.7"	"100.000"	"25.6309"	"5445"	"5445"	"5418"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"192.3"	""	"155.0"	""	"171.5"	""	"187.9"	"7.8"	"204.9"	"204.0"	""	"758"	"35"	"35.000"	"28.000"	"0.011820591523716"	"27"	"0"	"0.001449"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVDEALR"	"[R].iSVDEALR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P49186"	"Mitogen-activated protein kinase 9 OS=Rattus norvegicus OX=10116 GN=Mapk9 PE=1 SV=1"	"P49186"	"Mitogen-activated protein kinase 9 OS=Rattus norvegicus OX=10116 GN=Mapk9 PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"566.33032"	"1131.65337"	"1131.65710"	"-3.30"	"-0.00187"	"5/62"	"5"	"62"	"517260.549316406"	"HCD"	"MS2"	"100"	"29.7"	"100.000"	"62.5399"	"20394"	"20394"	"20366"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.8"	""	"36.6"	""	"37.6"	""	"50.2"	"0.2"	"58.1"	"61.5"	""	"904"	"14"	"36.000"	"29.000"	"1.77067328452718"	"23"	"0.001374"	"0.01582"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVDEAVR"	"[R].lTVDEAVR.[AK]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"566.33136"	"1131.65544"	"1131.65710"	"-1.47"	"-0.00083"	"11/62"	"11"	"62"	"10082209.5794678"	"HCD"	"MS2"	"0"	"337.8"	"79.501"	"50.9877"	"15740"	"15740"	"15726"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"528.7"	""	"541.0"	""	"578.9"	""	"385.5"	""	"542.8"	"623.7"	""	"823"	"44"	"36.000"	"29.000"	"0.00156808586326538"	""	"0.0002479"	"0.00524"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVDEAVR"	"[R].lTVDEAVR.[AK]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5682"	"0.0000"	"1"	"1"	"1"	"566.33148"	"1131.65569"	"1131.65710"	"-1.25"	"-0.00071"	"11/62"	"11"	"62"	"4698908.24810791"	"HCD"	"MS2"	"4.289244"	"209.5"	"100.000"	"50.7066"	"15625"	"15625"	"15604"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"342.9"	""	"365.8"	""	"329.7"	""	"247.3"	""	"315.9"	"382.8"	""	"822"	"44"	"36.000"	"29.000"	"0.00158431605000632"	""	"0.0001301"	"0.004554"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVDEALR"	"[R].iSVDEALR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P49186"	"Mitogen-activated protein kinase 9 OS=Rattus norvegicus OX=10116 GN=Mapk9 PE=1 SV=1"	"P49186"	"Mitogen-activated protein kinase 9 OS=Rattus norvegicus OX=10116 GN=Mapk9 PE=1 SV=1"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"566.33154"	"1131.65581"	"1131.65710"	"-1.14"	"-0.00065"	"6/62"	"6"	"62"	"1299388.35180664"	"HCD"	"MS2"	"29.5499"	"54.3"	"100.000"	"62.7985"	"20515"	"20515"	"20496"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"77.7"	""	"62.1"	""	"77.1"	""	"85.5"	""	"106.4"	"106.4"	""	"822"	"27"	"36.000"	"29.000"	"0.0888877313251805"	"27"	"0.0002479"	"0.005402"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVDEAVR"	"[R].lTVDEAVR.[AK]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"566.33154"	"1131.65581"	"1131.65710"	"-1.14"	"-0.00065"	"6/62"	"6"	"62"	"6950646.27410889"	"HCD"	"MS2"	"4.395563"	"297.3"	"100.000"	"51.3726"	"15885"	"15885"	"15869"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"427.7"	""	"460.5"	""	"510.9"	""	"361.4"	""	"478.0"	"575.3"	""	"822"	"36"	"36.000"	"29.000"	"0.0108353219957423"	""	"0.0005778"	"0.00813"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVDEALR"	"[R].iSVDEALR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P49186"	"Mitogen-activated protein kinase 9 OS=Rattus norvegicus OX=10116 GN=Mapk9 PE=1 SV=1"	"P49186"	"Mitogen-activated protein kinase 9 OS=Rattus norvegicus OX=10116 GN=Mapk9 PE=1 SV=1"	"0"	"2"	"2"	"0.4138"	"0.0000"	"1"	"1"	"1"	"566.33167"	"1131.65605"	"1131.65710"	"-0.93"	"-0.00053"	"9/62"	"9"	"62"	"1439848.95440674"	"HCD"	"MS2"	"12.9863"	"62.0"	"100.000"	"62.8599"	"20524"	"20524"	"20506"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"98.6"	""	"73.9"	""	"82.2"	""	"93.6"	""	"122.9"	"120.5"	""	"824"	"29"	"36.000"	"29.000"	"0.0495332947062374"	""	"0.0001301"	"0.004876"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEEVVGR"	"[K].tIEEVVGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"566.33167"	"1131.65605"	"1131.65710"	"-0.93"	"-0.00053"	"7/62"	"7"	"62"	"1142016.62841797"	"HCD"	"MS2"	"11.75155"	"63.1"	"100.000"	"53.8691"	"16916"	"16916"	"16892"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.4"	""	"83.5"	""	"112.5"	""	"90.7"	""	"110.2"	"119.3"	""	"824"	"12"	"36.000"	"29.000"	"2.49975367790464"	"23"	"0.00918"	"0.1193"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVEDTLR"	"[K].gLVEDTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"566.33167"	"1131.65605"	"1131.65710"	"-0.93"	"-0.00053"	"7/60"	"7"	"60"	"2955021.01757813"	"HCD"	"MS2"	"3.262559"	"118.2"	"100.000"	"54.7866"	"17287"	"17287"	"17268"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"166.3"	""	"150.7"	""	"189.9"	""	"167.4"	""	"197.8"	"248.2"	""	"824"	"27"	"36.000"	"29.000"	"0.0792313792310985"	"27"	"0.0008629"	"0.01026"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEEVVGR"	"[K].tIEEVVGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"566.33179"	"1131.65630"	"1131.65710"	"-0.71"	"-0.00040"	"6/62"	"6"	"62"	"3540747.67950439"	"HCD"	"MS2"	"0"	"163.5"	"100.000"	"53.8141"	"16882"	"16882"	"16864"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"245.6"	""	"222.0"	""	"239.5"	""	"245.2"	"0.9"	"285.8"	"309.5"	""	"824"	"22"	"36.000"	"29.000"	"0.232218714200293"	""	"0.00263"	"0.02561"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEEVVGR"	"[K].tIEEVVGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.1481"	"0.0000"	"1"	"1"	"1"	"566.33185"	"1131.65642"	"1131.65710"	"-0.60"	"-0.00034"	"7/62"	"7"	"62"	"3630346.94799805"	"HCD"	"MS2"	"0"	"157.3"	"100.000"	"53.5420"	"16782"	"16782"	"16764"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"246.5"	""	"226.6"	""	"229.7"	""	"227.5"	"0.0"	"270.4"	"288.4"	""	"824"	"27"	"36.000"	"29.000"	"0.0797805849146002"	""	"0.001374"	"0.01717"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVEDTLR"	"[K].gLVEDTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"566.33185"	"1131.65642"	"1131.65710"	"-0.60"	"-0.00034"	"12/60"	"12"	"60"	"2408917.19061279"	"HCD"	"MS2"	"9.580675"	"101.3"	"100.000"	"55.0351"	"17374"	"17374"	"17361"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"138.6"	""	"134.9"	""	"141.9"	""	"145.7"	""	"181.8"	"218.8"	""	"824"	"22"	"36.000"	"29.000"	"0.272833199525126"	"26"	"0.000936"	"0.01264"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVEDTLR"	"[K].gLVEDTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"566.33191"	"1131.65654"	"1131.65710"	"-0.50"	"-0.00028"	"6/60"	"6"	"60"	"4378015.73980713"	"HCD"	"MS2"	"9.396071"	"180.3"	"100.000"	"54.7326"	"17252"	"17252"	"17232"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"249.3"	""	"269.0"	""	"263.1"	""	"240.7"	"0.4"	"298.7"	"386.5"	""	"824"	"37"	"36.000"	"29.000"	"0.00850936624193938"	"29"	"0.0003538"	"0.006404"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEEVVGR"	"[K].tIEEVVGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"566.33191"	"1131.65654"	"1131.65710"	"-0.50"	"-0.00028"	"6/62"	"6"	"62"	"30232538.47229"	"HCD"	"MS2"	"0"	"417.6"	"34.412"	"53.5014"	"16755"	"16755"	"16738"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"593.3"	""	"578.6"	""	"657.8"	""	"630.4"	""	"712.8"	"787.2"	""	"824"	"39"	"36.000"	"29.000"	"0.00489662917704052"	""	"0.0008629"	"0.01063"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEEVVGR"	"[K].tIEEVVGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"566.33197"	"1131.65666"	"1131.65710"	"-0.39"	"-0.00022"	"6/62"	"6"	"62"	"7928322.15039063"	"HCD"	"MS2"	"5.13209"	"350.3"	"100.000"	"53.2002"	"16631"	"16631"	"16611"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"487.2"	""	"480.9"	""	"536.6"	""	"546.1"	"3.7"	"602.7"	"659.5"	""	"824"	"39"	"36.000"	"29.000"	"0.00511560750728073"	"29"	"0.0002479"	"0.005443"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVEDTLR"	"[K].gLVEDTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"566.33203"	"1131.65679"	"1131.65710"	"-0.28"	"-0.00016"	"6/60"	"6"	"60"	"4012593.46923828"	"HCD"	"MS2"	"3.368283"	"168.4"	"100.000"	"54.4813"	"17163"	"17163"	"17145"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"244.3"	""	"236.9"	""	"253.0"	""	"220.5"	"1.0"	"266.1"	"373.1"	""	"823"	"37"	"36.000"	"29.000"	"0.00855795186743171"	"29"	"0.0003538"	"0.006819"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEEVVGR"	"[K].tIEEVVGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"566.33203"	"1131.65679"	"1131.65710"	"-0.28"	"-0.00016"	"6/62"	"6"	"62"	"31294541.3128662"	"HCD"	"MS2"	"0"	"445.9"	"36.922"	"53.2269"	"16654"	"16654"	"16637"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"632.8"	""	"626.6"	""	"712.3"	""	"669.1"	""	"748.1"	"834.8"	""	"823"	"38"	"36.000"	"29.000"	"0.00711819431817015"	"28"	"0.001036"	"0.01359"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVDEAVR"	"[R].lTVDEAVR.[AK]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"566.33209"	"1131.65691"	"1131.65710"	"-0.17"	"-0.00010"	"6/62"	"6"	"62"	"6463676.72961426"	"HCD"	"MS2"	"2.452965"	"273.9"	"100.000"	"51.0778"	"15765"	"15765"	"15746"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"441.0"	""	"454.6"	""	"465.0"	""	"314.6"	""	"423.9"	"495.9"	""	"823"	"40"	"36.000"	"29.000"	"0.00399364851521519"	""	"0.0002479"	"0.005336"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEEVVGR"	"[K].tIEEVVGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"566.33209"	"1131.65691"	"1131.65710"	"-0.17"	"-0.00010"	"6/62"	"6"	"62"	"8563564.4442749"	"HCD"	"MS2"	"4.21766"	"365.6"	"100.000"	"52.9325"	"16533"	"16533"	"16513"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"509.1"	""	"501.8"	""	"544.5"	""	"591.9"	"9.3"	"632.6"	"673.2"	""	"823"	"39"	"36.000"	"29.000"	"0.00501614219957583"	"28"	"0.0002479"	"0.005182"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVDEALR"	"[R].iSVDEALR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P49186"	"Mitogen-activated protein kinase 9 OS=Rattus norvegicus OX=10116 GN=Mapk9 PE=1 SV=1"	"P49186"	"Mitogen-activated protein kinase 9 OS=Rattus norvegicus OX=10116 GN=Mapk9 PE=1 SV=1"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"566.33215"	"1131.65703"	"1131.65710"	"-0.07"	"-0.00004"	"6/62"	"6"	"62"	"908802.64276123"	"HCD"	"MS2"	"42.7059"	"47.9"	"100.000"	"62.4783"	"20385"	"20385"	"20359"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.3"	""	"50.4"	""	"65.4"	""	"78.9"	""	"98.5"	"87.1"	""	"860"	"39"	"36.000"	"29.000"	"0.00514598428462115"	"26"	"0"	"0.001232"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPVDAGK"	"[R].sPVDAGk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q7TP52"	"Carboxymethylenebutenolidase homolog OS=Rattus norvegicus OX=10116 GN=Cmbl PE=2 SV=1"	"Q7TP52"	"Carboxymethylenebutenolidase homolog OS=Rattus norvegicus OX=10116 GN=Cmbl PE=2 SV=1"	"0"	"2"	"2"	"0.4091"	"0.0000"	"1"	"1"	"1"	"566.34198"	"1131.67668"	"1131.67739"	"-0.63"	"-0.00036"	"6/54"	"6"	"54"	"2158910.03338623"	"HCD"	"MS2"	"41.95675"	"158.1"	"100.000"	"34.2423"	"8926"	"8926"	"8905"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"215.3"	""	"182.5"	""	"178.7"	""	"264.8"	""	"298.8"	"364.9"	""	"770"	"22"	"35.000"	"28.000"	"0.230919564358371"	"27"	"0.005067"	"0.05725"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAEVVK"	"[K].aGAEVVk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"566.35992"	"1131.71257"	"1131.71378"	"-1.07"	"-0.00060"	"6/48"	"6"	"48"	"2048703.78875732"	"HCD"	"MS2"	"51.45569"	"134.8"	"100.000"	"37.3195"	"10177"	"10177"	"10157"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"186.5"	""	"191.4"	""	"175.9"	""	"211.5"	""	"242.3"	"274.5"	""	"340"	"15"	"32.000"	"25.000"	"0.568131568044395"	"20"	"0.004942"	"0.05389"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAEVVK"	"[K].aGAEVVk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.1333"	"0.0000"	"1"	"1"	"1"	"566.36023"	"1131.71318"	"1131.71378"	"-0.53"	"-0.00030"	"9/48"	"9"	"48"	"2050623.60888672"	"HCD"	"MS2"	"29.95356"	"128.0"	"100.000"	"37.1531"	"10115"	"10115"	"10090"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"161.5"	""	"155.5"	""	"169.7"	""	"226.3"	""	"255.0"	"250.6"	""	"340"	"15"	"32.000"	"25.000"	"0.528991777308024"	""	"0.007602"	"0.09028"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAGGDFGNPLR"	"[M].sAGGDFGNPLR.[K]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"566.77191"	"1132.53655"	"1132.53816"	"-1.43"	"-0.00081"	"9/94"	"9"	"94"	"444406.657958984"	"HCD"	"MS2"	"0"	"18.0"	"100.000"	"66.2344"	"21908"	"21908"	"21885"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.0"	""	"18.5"	""	"25.2"	""	"28.4"	""	"33.4"	"39.0"	"NoQuanLabels"	"247"	"41"	"30.000"	"23.000"	"0.00105357864081172"	"15"	"0"	"0.0009434"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAGGDFGNPLR"	"[M].sAGGDFGNPLR.[K]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"566.77307"	"1132.53887"	"1132.53816"	"0.62"	"0.00035"	"7/94"	"7"	"94"	"432630.773498535"	"HCD"	"MS2"	"9.536783"	"16.3"	"100.000"	"66.3304"	"21932"	"21932"	"21911"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.3"	""	"20.3"	""	"19.0"	""	"30.9"	""	"30.2"	"34.3"	"NoQuanLabels"	"283"	"41"	"31.000"	"24.000"	"0.00125532575703371"	"15"	"0"	"0.0002476"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GETALSVAR"	"[R].gETALSVAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"B2RYW9"	"Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Fahd2 PE=1 SV=1"	"B2RYW9"	"Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Fahd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"566.82935"	"1132.65141"	"1132.65235"	"-0.83"	"-0.00047"	"8/72"	"8"	"72"	"4110084.42919922"	"HCD"	"MS2"	"0"	"178.8"	"100.000"	"37.4304"	"10226"	"10226"	"10209"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"268.4"	""	"248.4"	""	"250.2"	""	"286.3"	""	"312.3"	"327.2"	""	"794"	"38"	"35.000"	"28.000"	"0.00635024537360024"	"25"	"0"	"0.001265"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GETALSVAR"	"[R].gETALSVAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"B2RYW9"	"Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Fahd2 PE=1 SV=1"	"B2RYW9"	"Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Fahd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"566.82996"	"1132.65264"	"1132.65235"	"0.25"	"0.00014"	"6/72"	"6"	"72"	"4097398.30737305"	"HCD"	"MS2"	"8.773722"	"180.0"	"100.000"	"37.6151"	"10294"	"10294"	"10284"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"278.0"	""	"250.2"	""	"267.6"	""	"275.0"	"2.5"	"304.7"	"325.4"	""	"807"	"41"	"36.000"	"29.000"	"0.00342644321677153"	"25"	"0"	"0.0007829"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLR"	"[R].eFEPLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVR3"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Rattus norvegicus OX=10116 GN=Inppl1 PE=1 SV=1"	"Q9WVR3"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Rattus norvegicus OX=10116 GN=Inppl1 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"566.83124"	"1132.65520"	"1132.65638"	"-1.04"	"-0.00059"	"5/52"	"5"	"52"	"431123.988586426"	"HCD"	"MS2"	"47.49134"	"26.6"	"100.000"	"76.0411"	"25890"	"25890"	"25871"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.1"	""	"37.0"	""	"35.0"	""	"43.4"	""	"46.8"	"57.1"	""	"903"	"19"	"36.000"	"29.000"	"0.591095638234232"	"19"	"0.008837"	"0.1153"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMGTPDVR"	"[K].eMGTPDVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"567.29358"	"1133.57988"	"1133.58222"	"-2.07"	"-0.00117"	"5/66"	"5"	"66"	"5552216.33569336"	"HCD"	"MS2"	"52.28687"	"328.7"	"100.000"	"35.6073"	"9486"	"9486"	"9465"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"435.5"	""	"398.9"	""	"419.2"	""	"582.8"	"9.1"	"664.0"	"608.9"	""	"563"	"35"	"34.000"	"27.000"	"0.00840385207225405"	"26"	"0.001546"	"0.01888"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMGTPDVR"	"[K].eMGTPDVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"567.29376"	"1133.58025"	"1133.58222"	"-1.74"	"-0.00099"	"5/66"	"5"	"66"	"5360617.83056641"	"HCD"	"MS2"	"46.73721"	"336.5"	"100.000"	"35.7237"	"9529"	"9529"	"9514"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"415.7"	""	"402.7"	""	"441.5"	""	"602.3"	"6.4"	"679.2"	"645.4"	""	"563"	"38"	"34.000"	"27.000"	"0.00453396746302683"	"27"	"0.004022"	"0.04258"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVLEQER"	"[K].mVLEQER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"567.31201"	"1133.61675"	"1133.61861"	"-1.64"	"-0.00093"	"5/56"	"5"	"56"	"3280142.87969971"	"HCD"	"MS2"	"36.89197"	"184.2"	"100.000"	"42.6223"	"12327"	"12327"	"12308"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"311.8"	""	"270.5"	""	"253.3"	""	"229.2"	""	"336.3"	"344.3"	""	"820"	"27"	"36.000"	"29.000"	"0.0872537008852913"	"22"	"0.00736"	"0.08587"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVLEQER"	"[K].mVLEQER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"567.31274"	"1133.61821"	"1133.61861"	"-0.35"	"-0.00020"	"5/56"	"5"	"56"	"3182574.24536133"	"HCD"	"MS2"	"44.0302"	"179.3"	"100.000"	"42.4977"	"12287"	"12287"	"12268"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"288.6"	""	"244.3"	""	"257.9"	""	"248.8"	""	"340.9"	"319.1"	""	"829"	"29"	"36.000"	"29.000"	"0.0550205002728977"	"21"	"0.006739"	"0.07572"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APTLEAMR"	"[R].aPTLEAmR.[D]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"567.31305"	"1133.61882"	"1133.61861"	"0.19"	"0.00011"	"5/60"	"5"	"60"	"4571987.91033936"	"HCD"	"MS2"	"43.56891"	"183.7"	"100.000"	"34.7378"	"9128"	"9128"	"9106"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"218.1"	""	"186.9"	""	"230.1"	""	"434.3"	"0.6"	"345.8"	"326.2"	""	"842"	"22"	"36.000"	"29.000"	"0.278151941611198"	"15"	"0.00912"	"0.1175"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASTLDLDK"	"[M].aSTLDLDk.[G]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"P0C643"	"RAS guanyl-releasing protein 2 OS=Rattus norvegicus OX=10116 GN=Rasgrp2 PE=1 SV=1"	"P0C643"	"RAS guanyl-releasing protein 2 OS=Rattus norvegicus OX=10116 GN=Rasgrp2 PE=1 SV=1"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"567.31494"	"1133.62261"	"1133.62514"	"-2.23"	"-0.00126"	"5/66"	"5"	"66"	"753083.796875"	"HCD"	"MS2"	"24.418"	"28.6"	"100.000"	"76.8270"	"26199"	"26199"	"26184"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.9"	""	"33.8"	""	"35.6"	""	"40.1"	"0.6"	"61.7"	"65.9"	""	"823"	"31"	"36.000"	"29.000"	"0.031649717617794"	"27"	"0.00736"	"0.08713"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDSELTAR"	"[K].lDSELTAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"567.32019"	"1133.63310"	"1133.63637"	"-2.88"	"-0.00163"	"6/64"	"6"	"64"	"1056623.91705322"	"HCD"	"MS2"	"36.60243"	"72.4"	"100.000"	"50.4961"	"15529"	"15529"	"15502"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"94.2"	""	"91.6"	""	"99.0"	""	"115.1"	""	"136.8"	"155.6"	""	"857"	"15"	"36.000"	"29.000"	"1.34570797532596"	"15"	"0.00736"	"0.08648"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLTAEIDR"	"[K].sLTAEIDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"567.32141"	"1133.63555"	"1133.63637"	"-0.73"	"-0.00041"	"9/68"	"9"	"68"	"2066956.17071533"	"HCD"	"MS2"	"15.7304"	"128.3"	"100.000"	"48.0063"	"14525"	"14525"	"14502"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"167.8"	""	"148.3"	""	"150.4"	""	"217.5"	""	"261.8"	"277.7"	""	"829"	"18"	"36.000"	"29.000"	"0.72698346801341"	"17"	"0.00447"	"0.04801"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLTAEIDR"	"[K].sLTAEIDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"567.32166"	"1133.63603"	"1133.63637"	"-0.30"	"-0.00017"	"7/68"	"7"	"68"	"3733880.31530762"	"HCD"	"MS2"	"9.169947"	"178.6"	"100.000"	"47.7014"	"14401"	"14401"	"14381"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"254.0"	"3.3"	"217.6"	""	"221.8"	""	"299.1"	""	"356.2"	"344.3"	""	"829"	"31"	"36.000"	"29.000"	"0.0310116257961873"	"23"	"0.000936"	"0.01286"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLTAEIDR"	"[K].sLTAEIDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.4333"	"0.0000"	"1"	"1"	"1"	"567.32202"	"1133.63677"	"1133.63637"	"0.35"	"0.00020"	"7/68"	"7"	"68"	"3203237.80780029"	"HCD"	"MS2"	"7.651596"	"157.2"	"100.000"	"47.9722"	"14500"	"14500"	"14483"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"222.0"	""	"197.4"	""	"205.8"	""	"246.7"	"2.5"	"312.9"	"303.6"	""	"844"	"30"	"36.000"	"29.000"	"0.0382219157579041"	""	"0.001134"	"0.01387"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYADFYR"	"[K].aYADFYR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P11951"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3"	"P11951; P11950"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3; Cytochrome c oxidase subunit 6C-1 OS=Rattus norvegicus OX=10116 GN=Cox6c1 PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"567.79236"	"1134.57744"	"1134.57813"	"-0.60"	"-0.00034"	"5/48"	"5"	"48"	"1050045.97106934"	"HCD"	"MS2"	"17.49981"	"65.2"	"100.000"	"58.7261"	"18879"	"18879"	"18856"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"81.3"	""	"99.2"	""	"95.7"	""	"91.4"	"0.8"	"103.8"	"145.3"	""	"536"	"24"	"34.000"	"27.000"	"0.100031042289253"	"19"	"0.003111"	"0.03072"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYADFYR"	"[K].aYADFYR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P11951"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3"	"P11951; P11950"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3; Cytochrome c oxidase subunit 6C-1 OS=Rattus norvegicus OX=10116 GN=Cox6c1 PE=1 SV=3"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"567.79297"	"1134.57866"	"1134.57813"	"0.47"	"0.00027"	"5/48"	"5"	"48"	"1243397.41937256"	"HCD"	"MS2"	"13.70333"	"70.5"	"100.000"	"58.5447"	"18820"	"18820"	"18799"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"84.9"	""	"97.8"	""	"104.4"	""	"106.3"	"0.8"	"125.8"	"148.3"	""	"542"	"25"	"34.000"	"27.000"	"0.0943994123747592"	"23"	"0.003967"	"0.04152"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSDNDIR"	"[R].sVSDNDIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"567.80035"	"1134.59343"	"1134.59523"	"-1.59"	"-0.00090"	"5/72"	"5"	"72"	"2482964.23626709"	"HCD"	"MS2"	"10.21946"	"130.1"	"100.000"	"28.2351"	"6501"	"6501"	"6482"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"189.9"	""	"138.9"	""	"127.5"	""	"240.1"	""	"285.4"	"258.0"	""	"653"	"36"	"35.000"	"28.000"	"0.00765390708201955"	""	"0.0003538"	"0.006404"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSDNDIR"	"[R].sVSDNDIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"567.80121"	"1134.59514"	"1134.59523"	"-0.08"	"-0.00005"	"6/72"	"6"	"72"	"2808329.44769287"	"HCD"	"MS2"	"29.33032"	"147.8"	"100.000"	"28.3136"	"6519"	"6519"	"6491"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"207.5"	""	"145.2"	""	"172.4"	""	"274.4"	"0.0"	"314.5"	"289.0"	""	"643"	"34"	"35.000"	"28.000"	"0.0116998684114897"	""	"0.0002479"	"0.00563"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDMEIER"	"[K].lDMEIER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"3"	"567.80438"	"1134.60149"	"1134.60263"	"-1.00"	"-0.00057"	"5/56"	"5"	"56"	"3631352.30230713"	"HCD"	"MS2"	"8.870754"	"158.7"	"100.000"	"63.2110"	"20682"	"20682"	"20662"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"252.0"	""	"214.3"	""	"242.2"	""	"159.5"	""	"305.6"	"332.1"	""	"694"	"36"	"35.000"	"28.000"	"0.00973485472369244"	"28"	"0.002711"	"0.0262"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDMEIER"	"[K].lDMEIER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"3"	"567.80487"	"1134.60246"	"1134.60263"	"-0.14"	"-0.00008"	"5/56"	"5"	"56"	"3146235.19366455"	"HCD"	"MS2"	"8.759172"	"146.9"	"100.000"	"63.3069"	"20706"	"20706"	"20689"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"239.5"	""	"203.4"	""	"220.7"	""	"161.5"	""	"280.5"	"287.6"	""	"695"	"35"	"35.000"	"28.000"	"0.00988450234838149"	"27"	"0.0023"	"0.02323"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSFPGLNR"	"[K].dSFPGLNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"567.80780"	"1134.60832"	"1134.61049"	"-1.91"	"-0.00108"	"6/60"	"6"	"60"	"3728026.96282959"	"HCD"	"MS2"	"17.13712"	"195.4"	"100.000"	"54.8968"	"17332"	"17332"	"17314"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"238.5"	""	"299.2"	""	"265.2"	""	"326.5"	""	"347.6"	"379.5"	""	"654"	"27"	"35.000"	"28.000"	"0.0621652597534919"	"26"	"0.0008629"	"0.01057"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSFPGLNR"	"[K].dSFPGLNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"0.5135"	"0.0000"	"1"	"1"	"1"	"567.80798"	"1134.60869"	"1134.61049"	"-1.58"	"-0.00090"	"6/60"	"6"	"60"	"3364159.53723145"	"HCD"	"MS2"	"14.81009"	"174.9"	"100.000"	"55.1014"	"17401"	"17401"	"17386"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"222.3"	""	"240.7"	""	"257.3"	""	"291.2"	""	"328.6"	"319.0"	""	"654"	"37"	"35.000"	"28.000"	"0.00695901468036347"	""	"0.0001301"	"0.005021"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVWTDSR"	"[K].aAVWTDSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"567.80798"	"1134.60869"	"1134.61049"	"-1.58"	"-0.00090"	"6/60"	"6"	"60"	"8843488.87884521"	"HCD"	"MS2"	"42.55863"	"425.3"	"90.114"	"43.8216"	"12815"	"12815"	"12804"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"319.5"	""	"372.8"	""	"360.9"	""	"830.6"	""	"1088.4"	"1094.9"	""	"654"	"24"	"35.000"	"28.000"	"0.137894756621146"	"14"	"0.001812"	"0.02063"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVWTDSR"	"[K].aAVWTDSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"567.80829"	"1134.60930"	"1134.61049"	"-1.05"	"-0.00059"	"6/60"	"6"	"60"	"12631663.1616211"	"HCD"	"MS2"	"49.87175"	"358.0"	"51.732"	"43.6719"	"12764"	"12764"	"12754"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"266.6"	""	"303.7"	""	"321.3"	""	"695.1"	""	"947.1"	"889.8"	""	"729"	"23"	"35.000"	"28.000"	"0.204501987263836"	"23"	"0.0023"	"0.02421"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALAMGADR"	"[R].tALAMGADR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"567.81000"	"1134.61272"	"1134.61386"	"-1.01"	"-0.00057"	"10/78"	"10"	"78"	"5789283.61950684"	"HCD"	"MS2"	"0"	"283.4"	"100.000"	"40.0371"	"11276"	"11276"	"11257"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"528.9"	""	"441.0"	""	"472.4"	""	"282.8"	""	"454.9"	"503.5"	""	"719"	"42"	"35.000"	"28.000"	"0.0020262773726943"	"26"	"0"	"0.0004678"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALAMGADR"	"[R].tALAMGADR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"567.81006"	"1134.61284"	"1134.61386"	"-0.90"	"-0.00051"	"10/78"	"10"	"78"	"5290059.4508667"	"HCD"	"MS2"	"5.511851"	"249.1"	"100.000"	"39.8432"	"11206"	"11206"	"11188"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"453.2"	""	"413.4"	""	"432.1"	""	"237.4"	""	"407.0"	"411.2"	""	"710"	"43"	"35.000"	"28.000"	"0.00199172031491527"	"24"	"0"	"0.0005634"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLESINSR"	"[K].sLESINSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"567.81915"	"1134.63103"	"1134.63162"	"-0.52"	"-0.00029"	"6/72"	"6"	"72"	"8420986.58874512"	"HCD"	"MS2"	"2.645387"	"368.9"	"100.000"	"37.0160"	"10053"	"10053"	"10034"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"499.3"	""	"390.3"	""	"453.2"	""	"635.1"	""	"768.5"	"758.5"	""	"759"	"40"	"35.000"	"28.000"	"0.00383011470266102"	"28"	"0.001134"	"0.01382"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSNTLESR"	"[K].vSNTLESR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PCU2"	"V-type proton ATPase subunit E 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1e1 PE=1 SV=1"	"Q6PCU2"	"V-type proton ATPase subunit E 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1e1 PE=1 SV=1"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"567.81921"	"1134.63115"	"1134.63162"	"-0.41"	"-0.00023"	"6/76"	"6"	"76"	"1796571.9017334"	"HCD"	"MS2"	"11.72766"	"133.5"	"100.000"	"31.6846"	"7889"	"7889"	"7869"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"184.6"	""	"153.3"	""	"181.9"	""	"215.9"	"2.2"	"268.8"	"259.9"	""	"759"	"31"	"35.000"	"28.000"	"0.0269284762942106"	"27"	"0.000936"	"0.01132"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSNTLESR"	"[K].vSNTLESR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PCU2"	"V-type proton ATPase subunit E 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1e1 PE=1 SV=1"	"Q6PCU2"	"V-type proton ATPase subunit E 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1e1 PE=1 SV=1"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"567.81927"	"1134.63127"	"1134.63162"	"-0.30"	"-0.00017"	"6/76"	"6"	"76"	"6897471.1050415"	"HCD"	"MS2"	"15.70374"	"331.6"	"100.000"	"31.3828"	"7775"	"7775"	"7756"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"455.5"	""	"371.9"	""	"393.8"	""	"589.0"	""	"680.4"	"657.1"	""	"759"	"37"	"35.000"	"28.000"	"0.00703415251085921"	"24"	"0.0002479"	"0.005763"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLESINSR"	"[K].sLESINSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"567.81934"	"1134.63140"	"1134.63162"	"-0.20"	"-0.00011"	"6/72"	"6"	"72"	"9537847.10296631"	"HCD"	"MS2"	"0"	"396.5"	"100.000"	"36.8357"	"9985"	"9985"	"9969"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"526.0"	""	"461.2"	""	"474.1"	""	"682.7"	"3.1"	"817.3"	"799.7"	""	"763"	"38"	"35.000"	"28.000"	"0.00582766451217825"	"27"	"0.001211"	"0.01453"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSNTLESR"	"[K].vSNTLESR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PCU2"	"V-type proton ATPase subunit E 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1e1 PE=1 SV=1"	"Q6PCU2"	"V-type proton ATPase subunit E 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1e1 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"567.81946"	"1134.63164"	"1134.63162"	"0.02"	"0.00001"	"6/76"	"6"	"76"	"5482017.49304199"	"HCD"	"MS2"	"17.0233"	"289.6"	"100.000"	"31.3811"	"7765"	"7765"	"7741"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"397.7"	""	"321.6"	""	"359.1"	""	"531.2"	""	"578.6"	"560.7"	""	"770"	"36"	"35.000"	"28.000"	"0.0108507742853681"	"23"	"0.0002479"	"0.005521"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEIPYLR"	"[K].dEIPYLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"567.82092"	"1134.63457"	"1134.63564"	"-0.94"	"-0.00054"	"7/50"	"7"	"50"	"2504052.90118408"	"HCD"	"MS2"	"1.221288"	"99.5"	"100.000"	"69.1325"	"23089"	"23089"	"23070"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.2"	""	"106.8"	""	"123.8"	""	"150.6"	""	"234.6"	"220.1"	""	"783"	"28"	"35.000"	"28.000"	"0.0694595181768499"	"27"	"0.004069"	"0.04444"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEIPYLR"	"[K].dEIPYLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"567.82111"	"1134.63494"	"1134.63564"	"-0.62"	"-0.00035"	"5/50"	"5"	"50"	"692482.061523438"	"HCD"	"MS2"	"34.14384"	"36.1"	"100.000"	"68.7985"	"22953"	"22953"	"22927"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.8"	""	"35.3"	""	"46.0"	""	"65.0"	""	"74.8"	"78.9"	""	"783"	"22"	"35.000"	"28.000"	"0.255700611361485"	"23"	"0.009021"	"0.1162"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEIPYLR"	"[K].dEIPYLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"567.82117"	"1134.63506"	"1134.63564"	"-0.51"	"-0.00029"	"5/50"	"5"	"50"	"1630435.99530029"	"HCD"	"MS2"	"11.32445"	"57.4"	"100.000"	"69.5766"	"23256"	"23256"	"23235"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.4"	""	"60.6"	""	"68.2"	""	"89.1"	""	"129.8"	"136.3"	""	"783"	"16"	"35.000"	"28.000"	"1.05859969954861"	"21"	"0.006189"	"0.07029"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPLDER"	"[R].yLPLDER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P97849"	"Long-chain fatty acid transport protein 1 OS=Rattus norvegicus OX=10116 GN=Slc27a1 PE=2 SV=1"	"P97849"	"Long-chain fatty acid transport protein 1 OS=Rattus norvegicus OX=10116 GN=Slc27a1 PE=2 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"567.82135"	"1134.63542"	"1134.63564"	"-0.19"	"-0.00011"	"4/50"	"4"	"50"	"1028169.26599121"	"HCD"	"MS2"	"0"	"55.8"	"100.000"	"61.6272"	"20028"	"20028"	"20001"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"84.6"	""	"64.3"	""	"74.6"	""	"96.2"	"1.3"	"107.0"	"101.1"	""	"788"	"25"	"35.000"	"28.000"	"0.115743396287284"	"25"	"0.005427"	"0.06203"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEIPYLR"	"[K].dEIPYLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"567.82147"	"1134.63567"	"1134.63564"	"0.02"	"0.00001"	"9/50"	"9"	"50"	"2432822.12286377"	"HCD"	"MS2"	"2.031171"	"100.3"	"100.000"	"69.2585"	"23126"	"23126"	"23107"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"105.4"	""	"101.9"	""	"121.5"	""	"157.8"	""	"243.0"	"226.6"	""	"790"	"28"	"35.000"	"28.000"	"0.0627475965696122"	"27"	"0.003717"	"0.03822"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVGMSNDGR"	"[K].aVGMSNDGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JIH7"	"Serine/threonine-protein kinase WNK1 OS=Rattus norvegicus OX=10116 GN=Wnk1 PE=1 SV=2"	"Q9JIH7"	"Serine/threonine-protein kinase WNK1 OS=Rattus norvegicus OX=10116 GN=Wnk1 PE=1 SV=2"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"568.28986"	"1135.57244"	"1135.57272"	"-0.25"	"-0.00014"	"7/74"	"7"	"74"	"1044862.18249512"	"HCD"	"MS2"	"11.66952"	"89.1"	"100.000"	"26.0468"	"5599"	"5599"	"5580"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.9"	""	"107.9"	""	"122.1"	""	"132.7"	""	"183.1"	"174.1"	""	"530"	"33"	"34.000"	"27.000"	"0.0147654223466961"	"17"	"0.0001301"	"0.004156"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGFDEIR"	"[R].gLGFDEIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q7"	"Syntaxin-8 OS=Rattus norvegicus OX=10116 GN=Stx8 PE=1 SV=1"	"Q9Z2Q7"	"Syntaxin-8 OS=Rattus norvegicus OX=10116 GN=Stx8 PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"568.31830"	"1135.62932"	"1135.63089"	"-1.38"	"-0.00078"	"7/58"	"7"	"58"	"1872741.72607422"	"HCD"	"MS2"	"39.4798"	"55.1"	"100.000"	"69.9339"	"23402"	"23402"	"23385"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.2"	""	"56.8"	""	"77.3"	""	"97.0"	"0.1"	"109.8"	"113.4"	""	"732"	"11"	"35.000"	"28.000"	"2.74461280615678"	"19"	"0.004942"	"0.05519"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVQEIFR"	"[R].dVQEIFR.[ML]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"568.31848"	"1135.62969"	"1135.63089"	"-1.06"	"-0.00060"	"5/62"	"5"	"62"	"814148.30847168"	"HCD"	"MS2"	"5.296996"	"43.5"	"100.000"	"67.6493"	"22470"	"22470"	"22446"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.3"	""	"50.4"	""	"49.8"	""	"82.7"	""	"87.7"	"75.9"	""	"734"	"24"	"35.000"	"28.000"	"0.141470557263338"	"25"	"0.00736"	"0.08781"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAIDNGFR"	"[K].iAIDnGFR.[H]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"568.31848"	"1135.62969"	"1135.63089"	"-1.06"	"-0.00060"	"6/62"	"6"	"62"	"1589432.86950684"	"HCD"	"MS2"	"10.46464"	"71.9"	"100.000"	"71.1738"	"23908"	"23908"	"23893"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"117.9"	""	"85.7"	""	"103.2"	""	"110.2"	""	"129.6"	"139.0"	""	"734"	"40"	"35.000"	"28.000"	"0.00405196853504061"	""	"0"	"0.003387"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVQEIFR"	"[R].dVQEIFR.[ML]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"568.31854"	"1135.62981"	"1135.63089"	"-0.95"	"-0.00054"	"5/62"	"5"	"62"	"1876296.80480957"	"HCD"	"MS2"	"3.633336"	"87.9"	"100.000"	"67.9331"	"22586"	"22586"	"22569"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"136.6"	""	"102.2"	""	"95.7"	""	"152.8"	""	"177.2"	"176.2"	""	"734"	"34"	"35.000"	"28.000"	"0.0148821632509557"	"27"	"0.003111"	"0.0308"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGFDEIR"	"[R].gLGFDEIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q7"	"Syntaxin-8 OS=Rattus norvegicus OX=10116 GN=Stx8 PE=1 SV=1"	"Q9Z2Q7"	"Syntaxin-8 OS=Rattus norvegicus OX=10116 GN=Stx8 PE=1 SV=1"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"568.31854"	"1135.62981"	"1135.63089"	"-0.95"	"-0.00054"	"11/58"	"11"	"58"	"2113032.36450195"	"HCD"	"MS2"	"46.20832"	"60.5"	"100.000"	"69.7641"	"23346"	"23346"	"23326"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"76.6"	""	"73.7"	""	"77.4"	""	"103.5"	""	"116.5"	"126.9"	""	"734"	"10"	"35.000"	"28.000"	"3.56177157979094"	"20"	"0.006443"	"0.07224"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"568.31860"	"1135.62993"	"1135.63089"	"-0.84"	"-0.00048"	"10/62"	"10"	"62"	"606433.409912109"	"HCD"	"MS2"	"2.86971"	"36.3"	"100.000"	"75.1341"	"25523"	"25523"	"25502"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.4"	""	"40.0"	""	"50.9"	""	"58.1"	""	"66.7"	"72.6"	""	"734"	"23"	"35.000"	"28.000"	"0.191278458975565"	"21"	"0.005921"	"0.06709"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAIDNGFR"	"[K].iAIDnGFR.[H]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"2"	"2"	"0.5750"	"0.0000"	"1"	"1"	"1"	"568.31860"	"1135.62993"	"1135.63089"	"-0.84"	"-0.00048"	"6/62"	"6"	"62"	"1637840.36663818"	"HCD"	"MS2"	"0"	"76.5"	"100.000"	"71.0614"	"23875"	"23875"	"23857"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.4"	""	"90.8"	""	"109.0"	""	"119.3"	""	"139.0"	"154.9"	""	"734"	"40"	"35.000"	"28.000"	"0.00379897175171319"	""	"0"	"0.003265"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAIDNGFR"	"[K].iAIDnGFR.[H]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"568.31860"	"1135.62993"	"1135.63089"	"-0.84"	"-0.00048"	"6/62"	"6"	"62"	"1574833.79589844"	"HCD"	"MS2"	"8.306403"	"69.3"	"100.000"	"70.7556"	"23750"	"23750"	"23732"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"94.8"	""	"91.2"	""	"101.1"	""	"111.8"	""	"126.9"	"131.1"	""	"734"	"38"	"35.000"	"28.000"	"0.00646645209033068"	""	"0.0001301"	"0.00389"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVQEIFR"	"[R].dVQEIFR.[ML]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"568.31866"	"1135.63005"	"1135.63089"	"-0.74"	"-0.00042"	"5/62"	"5"	"62"	"1127853.59649658"	"HCD"	"MS2"	"10.23286"	"55.5"	"100.000"	"67.5509"	"22445"	"22445"	"22424"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"88.0"	""	"67.2"	""	"65.3"	""	"102.8"	"1.1"	"99.6"	"101.8"	""	"734"	"34"	"35.000"	"28.000"	"0.0158732575989848"	"24"	"0.003449"	"0.03411"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVQEIFR"	"[R].dVQEIFR.[ML]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"568.31873"	"1135.63017"	"1135.63089"	"-0.63"	"-0.00036"	"5/62"	"5"	"62"	"1766043.04327393"	"HCD"	"MS2"	"9.262615"	"86.0"	"100.000"	"67.8416"	"22563"	"22563"	"22546"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"132.9"	""	"103.6"	""	"102.8"	""	"144.8"	""	"167.4"	"170.3"	""	"751"	"27"	"35.000"	"28.000"	"0.0825296382230702"	"27"	"0.003449"	"0.03517"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAIDNGFR"	"[K].iAIDnGFR.[H]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"2"	"2"	"0.5135"	"0.0000"	"1"	"1"	"1"	"568.31873"	"1135.63017"	"1135.63089"	"-0.63"	"-0.00036"	"6/62"	"6"	"62"	"1622693.35974121"	"HCD"	"MS2"	"6.996391"	"73.5"	"100.000"	"70.8771"	"23786"	"23786"	"23765"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.8"	""	"86.2"	""	"102.7"	""	"121.9"	""	"133.1"	"148.3"	""	"751"	"37"	"35.000"	"28.000"	"0.00740644737411128"	""	"0.0001301"	"0.004513"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAIDNGFR"	"[K].iAIDnGFR.[H]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"568.31885"	"1135.63042"	"1135.63089"	"-0.41"	"-0.00024"	"6/62"	"6"	"62"	"929694.410644531"	"HCD"	"MS2"	"20.68771"	"51.2"	"100.000"	"71.4776"	"24031"	"24031"	"24013"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"99.9"	""	"63.8"	""	"67.6"	""	"74.7"	""	"88.7"	"92.5"	""	"751"	"35"	"35.000"	"28.000"	"0.0133232427657208"	"27"	"0"	"0.003363"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"568.31885"	"1135.63042"	"1135.63089"	"-0.41"	"-0.00024"	"10/62"	"10"	"62"	"4582780.18695068"	"HCD"	"MS2"	"0.9475099"	"207.5"	"100.000"	"74.8805"	"25410"	"25410"	"25397"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"272.7"	""	"263.1"	""	"276.2"	""	"368.7"	""	"367.8"	"419.1"	""	"751"	"33"	"35.000"	"28.000"	"0.0193023391169201"	"20"	"0.004069"	"0.04462"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"568.31891"	"1135.63054"	"1135.63089"	"-0.31"	"-0.00017"	"9/62"	"9"	"62"	"521829.75402832"	"HCD"	"MS2"	"13.18339"	"32.6"	"100.000"	"74.5129"	"25279"	"25279"	"25255"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.0"	""	"41.4"	""	"42.7"	""	"54.7"	""	"53.3"	"73.5"	""	"751"	"31"	"35.000"	"28.000"	"0.0316672201540486"	"23"	"0.001374"	"0.01678"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAIDNGFR"	"[K].iAIDnGFR.[H]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"568.31897"	"1135.63066"	"1135.63089"	"-0.20"	"-0.00011"	"6/62"	"6"	"62"	"1001499.11212158"	"HCD"	"MS2"	"10.76755"	"58.7"	"100.000"	"71.3607"	"23997"	"23997"	"23978"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"125.9"	""	"65.9"	""	"75.7"	""	"80.6"	""	"103.5"	"106.9"	""	"764"	"37"	"35.000"	"28.000"	"0.00785350207665943"	"28"	"0.0002479"	"0.005384"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"568.31903"	"1135.63078"	"1135.63089"	"-0.09"	"-0.00005"	"10/62"	"10"	"62"	"4672577.45489502"	"HCD"	"MS2"	"1.162555"	"212.6"	"100.000"	"74.8107"	"25399"	"25399"	"25384"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"289.2"	""	"253.7"	""	"285.0"	""	"384.7"	""	"358.7"	"445.2"	""	"764"	"31"	"35.000"	"28.000"	"0.028383331067654"	"20"	"0.003967"	"0.04225"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"568.31915"	"1135.63103"	"1135.63089"	"0.12"	"0.00007"	"10/62"	"10"	"62"	"1122029.84283447"	"HCD"	"MS2"	"0"	"57.1"	"100.000"	"75.1958"	"25537"	"25537"	"25520"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"74.2"	""	"69.4"	""	"78.2"	""	"100.0"	""	"105.3"	"118.3"	""	"764"	"34"	"35.000"	"28.000"	"0.0142253631789245"	"21"	"0.001886"	"0.02094"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEK"	"[KE].gAGTDEk.[VAT]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3;Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3; Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"568.32013"	"1135.63298"	"1135.63592"	"-2.59"	"-0.00147"	"6/52"	"6"	"52"	"28948593.2559814"	"HCD"	"MS2"	"25.84833"	"2186.0"	"100.000"	"22.4884"	"4179"	"4179"	"4154"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3300.2"	""	"2636.2"	""	"2905.9"	""	"3832.4"	""	"3906.4"	"4280.1"	""	"747"	"39"	"35.000"	"28.000"	"0.0045320073564867"	"25"	"0.005617"	"0.06424"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEK"	"[KE].gAGTDEk.[VAT]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3;Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3; Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"568.32098"	"1135.63469"	"1135.63592"	"-1.09"	"-0.00062"	"6/52"	"6"	"52"	"1634633.26226807"	"HCD"	"MS2"	"6.965816"	"148.5"	"100.000"	"23.0964"	"4428"	"4428"	"4405"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"215.2"	""	"167.0"	""	"188.6"	""	"239.6"	""	"284.7"	"316.0"	""	"754"	"29"	"35.000"	"28.000"	"0.0503896509738009"	"21"	"0.005921"	"0.06821"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEK"	"[KE].gAGTDEk.[VAT]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3;Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3; Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"568.32123"	"1135.63518"	"1135.63592"	"-0.66"	"-0.00037"	"6/52"	"6"	"52"	"9714952.24731445"	"HCD"	"MS2"	"0"	"674.4"	"94.591"	"22.7776"	"4297"	"4297"	"4278"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"955.0"	""	"791.9"	""	"893.9"	""	"1170.8"	""	"1220.7"	"1367.3"	""	"754"	"36"	"35.000"	"28.000"	"0.0102409760435234"	"23"	"0.005427"	"0.06269"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEK"	"[KE].gAGTDEk.[VAT]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3;Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3; Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"568.32135"	"1135.63542"	"1135.63592"	"-0.44"	"-0.00025"	"6/52"	"6"	"52"	"6654527.60870361"	"HCD"	"MS2"	"0"	"525.0"	"100.000"	"22.8649"	"4316"	"4316"	"4297"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"767.6"	""	"619.3"	""	"697.7"	""	"901.8"	""	"955.1"	"1044.6"	""	"754"	"37"	"35.000"	"28.000"	"0.00711772738609302"	"24"	"0.00447"	"0.04885"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEK"	"[KE].gAGTDEk.[VAT]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3;Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3; Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"568.32166"	"1135.63603"	"1135.63592"	"0.10"	"0.00006"	"6/52"	"6"	"52"	"57016866.0606689"	"HCD"	"MS2"	"0"	"2931.7"	"67.060"	"22.5577"	"4191"	"4191"	"4174"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4364.5"	""	"3481.1"	""	"3925.6"	""	"5090.1"	""	"5315.6"	"5810.3"	""	"754"	"36"	"35.000"	"28.000"	"0.0105278902814648"	"24"	"0.006685"	"0.07447"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEDLRR"	"[K].fAEDLRR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"1"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"1"	"379.21854"	"1135.64106"	"1135.64212"	"-0.94"	"-0.00036"	"4/52"	"4"	"52"	"7246734.50213623"	"HCD"	"MS2"	"5.112596"	"316.4"	"100.000"	"37.3473"	"10188"	"10188"	"10169"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"759.7"	""	"569.8"	""	"359.3"	""	"495.4"	"0.4"	"405.2"	"389.9"	""	"695"	"27"	"35.000"	"28.000"	"0.067757099841592"	""	"0.00912"	"0.1181"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGTPSAFDR"	"[R].gGTPSAFDR.[VI]"	"N-Term(TMT6plex)"	"2"	"3"	"P30835; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3;ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P30835; P47858; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3; ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3; ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"568.79822"	"1136.58916"	"1136.58975"	"-0.52"	"-0.00030"	"7/74"	"7"	"74"	"6894234.69384766"	"HCD"	"MS2"	"46.35116"	"408.1"	"100.000"	"32.8832"	"8378"	"8378"	"8360"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"582.7"	""	"432.1"	""	"482.2"	""	"501.2"	""	"540.4"	"1348.1"	""	"585"	"25"	"34.000"	"27.000"	"0.101654327222138"	"18"	"0.007279"	"0.08352"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGTPSAFDR"	"[R].gGTPSAFDR.[VI]"	"N-Term(TMT6plex)"	"2"	"3"	"P30835; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3;ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P30835; P47858; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3; ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3; ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"568.79822"	"1136.58916"	"1136.58975"	"-0.52"	"-0.00030"	"7/74"	"7"	"74"	"8035895.30084229"	"HCD"	"MS2"	"8.946885"	"461.9"	"100.000"	"33.1890"	"8502"	"8502"	"8484"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"671.1"	""	"594.5"	""	"624.3"	""	"717.2"	""	"826.6"	"953.7"	""	"585"	"30"	"34.000"	"27.000"	"0.0267378123130048"	"20"	"0.003922"	"0.03935"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGTPSAFDR"	"[R].gGTPSAFDR.[VI]"	"N-Term(TMT6plex)"	"2"	"3"	"P30835; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3;ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P30835; P47858; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3; ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3; ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"568.79828"	"1136.58928"	"1136.58975"	"-0.42"	"-0.00024"	"8/74"	"8"	"74"	"9236326.58032227"	"HCD"	"MS2"	"47.11222"	"499.9"	"100.000"	"32.8921"	"8388"	"8388"	"8363"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"737.4"	""	"586.5"	""	"639.5"	""	"683.5"	""	"769.9"	"1337.6"	""	"585"	"31"	"34.000"	"27.000"	"0.0252421225221839"	"20"	"0.002795"	"0.02658"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGTPSAFDR"	"[R].gGTPSAFDR.[VI]"	"N-Term(TMT6plex)"	"2"	"3"	"P30835; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3;ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P30835; P47858; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3; ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3; ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"568.79852"	"1136.58977"	"1136.58975"	"0.01"	"0.00001"	"7/74"	"7"	"74"	"7760690.03820801"	"HCD"	"MS2"	"9.658628"	"427.6"	"92.928"	"33.1886"	"8509"	"8509"	"8491"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"627.9"	""	"550.3"	""	"574.2"	""	"676.7"	""	"765.8"	"865.6"	""	"585"	"34"	"34.000"	"27.000"	"0.0125350442216251"	"25"	"0.003111"	"0.03079"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFQPDTGR"	"[R].sFQPDTGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"568.79865"	"1136.59001"	"1136.58975"	"0.23"	"0.00013"	"6/76"	"6"	"76"	"2776947.64819336"	"HCD"	"MS2"	"29.93608"	"180.3"	"100.000"	"32.2670"	"8134"	"8134"	"8119"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"274.5"	""	"215.7"	""	"238.3"	""	"296.2"	""	"331.8"	"353.3"	""	"585"	"15"	"34.000"	"27.000"	"0.912275203347476"	"22"	"0.004817"	"0.05079"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFQPDTGR"	"[R].sFQPDTGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"568.79907"	"1136.59087"	"1136.58975"	"0.98"	"0.00056"	"5/76"	"5"	"76"	"3253187.53137207"	"HCD"	"MS2"	"41.34534"	"222.0"	"100.000"	"32.2539"	"8122"	"8122"	"8100"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"355.0"	""	"260.1"	""	"292.2"	""	"326.2"	""	"424.7"	"448.9"	""	"588"	"16"	"34.000"	"27.000"	"0.725015565146896"	"21"	"0.002973"	"0.02987"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIFEDDR"	"[K].iIFEDDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"568.81036"	"1136.61345"	"1136.61490"	"-1.28"	"-0.00073"	"9/52"	"9"	"52"	"1356373.25354004"	"HCD"	"MS2"	"15.39698"	"61.1"	"100.000"	"66.3742"	"21950"	"21950"	"21927"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"99.5"	""	"83.8"	""	"75.7"	""	"97.6"	""	"112.8"	"109.5"	""	"699"	"25"	"35.000"	"28.000"	"0.113095983096905"	"24"	"0.004069"	"0.04494"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIFEDDR"	"[K].iIFEDDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"568.81042"	"1136.61357"	"1136.61490"	"-1.17"	"-0.00067"	"8/52"	"8"	"52"	"15244772.8788452"	"HCD"	"MS2"	"0"	"454.0"	"70.520"	"66.5756"	"22047"	"22047"	"22029"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"740.1"	""	"572.1"	""	"574.1"	""	"697.7"	""	"860.5"	"858.6"	""	"699"	"35"	"35.000"	"28.000"	"0.0111801384083714"	"27"	"0.003189"	"0.03198"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"568.81055"	"1136.61382"	"1136.61491"	"-0.96"	"-0.00054"	"6/62"	"6"	"62"	"782457.531555176"	"HCD"	"MS2"	"3.939497"	"39.5"	"100.000"	"80.1114"	"27528"	"27528"	"27511"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.4"	""	"59.3"	""	"77.9"	""	"55.9"	""	"56.7"	"56.7"	""	"699"	"31"	"35.000"	"28.000"	"0.0257897528430121"	"23"	"0.001374"	"0.01595"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIFEDDR"	"[K].iIFEDDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"568.81061"	"1136.61394"	"1136.61490"	"-0.85"	"-0.00048"	"6/52"	"6"	"52"	"361271.941101074"	"HCD"	"MS2"	"24.64089"	"25.6"	"100.000"	"67.2210"	"22311"	"22311"	"22284"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.5"	""	"28.9"	""	"32.1"	""	"43.1"	""	"52.1"	"45.8"	""	"699"	"23"	"35.000"	"28.000"	"0.169218242470643"	"23"	"0.005183"	"0.05893"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIFEDDR"	"[K].iIFEDDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"568.81061"	"1136.61394"	"1136.61490"	"-0.85"	"-0.00048"	"8/52"	"8"	"52"	"2892090.40325928"	"HCD"	"MS2"	"0"	"138.5"	"100.000"	"66.9800"	"22197"	"22197"	"22179"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"225.1"	""	"170.1"	""	"163.0"	""	"212.0"	""	"271.9"	"275.2"	""	"699"	"38"	"35.000"	"28.000"	"0.0049939843849963"	"28"	"0.002379"	"0.02455"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIFEDDR"	"[K].iIFEDDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"568.81067"	"1136.61406"	"1136.61490"	"-0.74"	"-0.00042"	"6/52"	"6"	"52"	"336737.517883301"	"HCD"	"MS2"	"17.69885"	"24.4"	"100.000"	"67.3171"	"22335"	"22335"	"22306"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.0"	""	"30.5"	""	"31.6"	""	"42.1"	""	"47.0"	"48.8"	""	"699"	"23"	"35.000"	"28.000"	"0.195185333060522"	"26"	"0.003581"	"0.03741"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"3"	"568.81073"	"1136.61418"	"1136.61491"	"-0.64"	"-0.00036"	"5/62"	"5"	"62"	"465194.998168945"	"HCD"	"MS2"	"39.42912"	"26.9"	"100.000"	"89.2338"	"31121"	"31121"	"31109"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.5"	""	"32.7"	""	"31.7"	""	"51.8"	"1.0"	"41.0"	"61.6"	""	"721"	"8"	"35.000"	"28.000"	"5.58348391117949"	"15"	"0.008777"	"0.1133"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIFEDDR"	"[K].iIFEDDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"568.81073"	"1136.61418"	"1136.61490"	"-0.63"	"-0.00036"	"8/52"	"8"	"52"	"2603762.70550537"	"HCD"	"MS2"	"0"	"125.6"	"100.000"	"66.8866"	"22174"	"22174"	"22156"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"183.2"	""	"153.3"	""	"157.7"	""	"181.3"	""	"253.9"	"263.5"	""	"721"	"35"	"35.000"	"28.000"	"0.0121312420759865"	"27"	"0.002056"	"0.02258"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIFEDDR"	"[K].iIFEDDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"568.81079"	"1136.61431"	"1136.61490"	"-0.53"	"-0.00030"	"7/52"	"7"	"52"	"1495406.18334961"	"HCD"	"MS2"	"29.22115"	"66.9"	"100.000"	"66.2828"	"21928"	"21928"	"21901"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"115.5"	""	"83.9"	""	"91.2"	""	"109.4"	""	"118.4"	"119.4"	""	"721"	"30"	"35.000"	"28.000"	"0.0362998866621076"	"27"	"0.003449"	"0.03408"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"568.81110"	"1136.61492"	"1136.61491"	"0.01"	"0.00001"	"10/62"	"10"	"62"	"844961.714782715"	"HCD"	"MS2"	"3.076655"	"44.0"	"100.000"	"80.1247"	"27530"	"27530"	"27514"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.2"	""	"68.6"	""	"81.3"	""	"52.3"	""	"63.2"	"65.4"	""	"740"	"35"	"35.000"	"28.000"	"0.013007736299547"	"19"	"0.000936"	"0.01276"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIFEDDR"	"[K].iIFEDDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"568.81122"	"1136.61516"	"1136.61490"	"0.22"	"0.00013"	"8/52"	"8"	"52"	"13329182.352417"	"HCD"	"MS2"	"0"	"465.7"	"83.551"	"66.6647"	"22069"	"22069"	"22052"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"722.4"	""	"601.4"	""	"586.5"	""	"695.6"	""	"935.7"	"875.6"	""	"740"	"32"	"35.000"	"28.000"	"0.0232917287657163"	"26"	"0.004069"	"0.04409"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"568.81128"	"1136.61528"	"1136.61491"	"0.33"	"0.00019"	"9/62"	"9"	"62"	"850990.348388672"	"HCD"	"MS2"	"0"	"38.0"	"100.000"	"89.5274"	"31233"	"31233"	"31226"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.0"	""	"41.0"	""	"46.8"	""	"67.1"	""	"73.5"	"80.2"	""	"740"	"28"	"35.000"	"28.000"	"0.0565199441548087"	"23"	"0.003653"	"0.03756"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"568.81165"	"1136.61601"	"1136.61491"	"0.98"	"0.00055"	"10/62"	"10"	"62"	"1071630.4331665"	"HCD"	"MS2"	"3.787665"	"49.2"	"100.000"	"89.4958"	"31222"	"31222"	"31214"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.1"	""	"63.9"	""	"59.3"	""	"84.1"	""	"97.0"	"98.3"	""	"710"	"31"	"35.000"	"28.000"	"0.0273041306301746"	"23"	"0.003449"	"0.03289"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"568.81250"	"1136.61772"	"1136.61491"	"2.48"	"0.00141"	"6/62"	"6"	"62"	"691529.842529297"	"HCD"	"MS2"	"4.225246"	"34.6"	"100.000"	"89.2609"	"31130"	"31130"	"31114"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.9"	""	"41.6"	""	"45.9"	""	"68.2"	""	"55.8"	"69.3"	""	"690"	"18"	"35.000"	"28.000"	"0.517391268248319"	"20"	"0.006769"	"0.07793"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLDYGGVAR"	"[K].gLDYGGVAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.4048"	"0.0000"	"1"	"1"	"1"	"568.81622"	"1136.62517"	"1136.62614"	"-0.85"	"-0.00048"	"7/64"	"7"	"64"	"6815718.53356934"	"HCD"	"MS2"	"10.93759"	"330.0"	"100.000"	"45.8504"	"13647"	"13647"	"13627"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"443.9"	""	"402.1"	""	"428.2"	""	"555.9"	"0.5"	"683.1"	"617.5"	""	"644"	"42"	"35.000"	"28.000"	"0.00193132726554274"	""	"0"	"0.0005523"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNDLLYR"	"[K].nNDLLYR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"568.81628"	"1136.62529"	"1136.62614"	"-0.74"	"-0.00042"	"6/60"	"6"	"60"	"2869602.28204346"	"HCD"	"MS2"	"3.634042"	"149.2"	"100.000"	"44.0944"	"12925"	"12925"	"12907"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"170.7"	""	"170.5"	""	"193.5"	""	"213.3"	"0.5"	"328.5"	"341.8"	""	"644"	"33"	"35.000"	"28.000"	"0.0167053612535125"	"25"	"0.004606"	"0.04945"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNDLLYR"	"[K].nNDLLYR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"568.81653"	"1136.62578"	"1136.62614"	"-0.32"	"-0.00018"	"6/60"	"6"	"60"	"2883520.55334473"	"HCD"	"MS2"	"0"	"145.4"	"100.000"	"43.9722"	"12886"	"12886"	"12865"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"167.9"	""	"187.9"	""	"179.6"	""	"195.9"	""	"315.7"	"337.2"	""	"653"	"34"	"35.000"	"28.000"	"0.0134240383940626"	"25"	"0.003967"	"0.04195"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLDYGGVAR"	"[K].gLDYGGVAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"1"	"568.81659"	"1136.62590"	"1136.62614"	"-0.21"	"-0.00012"	"7/64"	"7"	"64"	"6054285.18145752"	"HCD"	"MS2"	"0"	"310.6"	"100.000"	"45.9931"	"13694"	"13694"	"13677"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"432.7"	""	"398.7"	""	"414.5"	""	"503.6"	""	"617.6"	"580.5"	""	"660"	"40"	"35.000"	"28.000"	"0.00320268289191011"	""	"0"	"0.000952"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].SVSELPIVHR.[D]"	""	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.8936"	"0.0000"	"1"	"1"	"1"	"379.55161"	"1136.64026"	"1136.64223"	"-1.73"	"-0.00066"	"6/78"	"6"	"78"	"1955140.60113525"	"HCD"	"MS2"	"30.47717"	"20.4"	"100.000"	"36.0617"	"9671"	"9671"	"9656"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.7"	""	"22.3"	""	"30.4"	""	"34.5"	""	"47.0"	"37.6"	"NoQuanLabels"	"642"	"47"	"35.000"	"28.000"	"0.000597729970868781"	"21"	"0.004867"	"0.05203"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].SVSELPIVHR.[D]"	""	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"379.55197"	"1136.64136"	"1136.64223"	"-0.77"	"-0.00029"	"6/78"	"6"	"78"	"1728176.74407959"	"HCD"	"MS2"	"11.22323"	"30.4"	"100.000"	"36.4231"	"9811"	"9811"	"9792"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.5"	""	"38.5"	""	"39.4"	""	"54.0"	"1.3"	"64.3"	"60.3"	"NoQuanLabels"	"575"	"29"	"34.000"	"27.000"	"0.0358622760344846"	"19"	"0.008837"	"0.115"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSASGTK"	"[K].qSASGTk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P30835; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3;ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P30835; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3; ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"568.83691"	"1136.66655"	"1136.66756"	"-0.89"	"-0.00050"	"6/68"	"6"	"68"	"3200462.2232666"	"HCD"	"MS2"	"2.872721"	"256.2"	"100.000"	"20.6496"	"3434"	"3434"	"3413"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"359.3"	""	"290.0"	""	"318.7"	""	"452.0"	"2.8"	"487.9"	"519.0"	""	"466"	"23"	"33.000"	"26.000"	"0.129525691944004"	"17"	"0.006958"	"0.08033"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSASGTK"	"[K].qSASGTk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P30835; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3;ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P30835; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3; ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"568.83710"	"1136.66692"	"1136.66756"	"-0.56"	"-0.00032"	"6/68"	"6"	"68"	"6658098.98724365"	"HCD"	"MS2"	"5.220492"	"490.7"	"100.000"	"20.6691"	"3428"	"3428"	"3412"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"719.5"	""	"573.7"	""	"587.2"	""	"818.1"	"1.5"	"981.3"	"973.8"	""	"466"	"26"	"33.000"	"26.000"	"0.0587971019987974"	"20"	"0.006308"	"0.07183"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYEAGER"	"[R].aLYEAGER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.5135"	"0.0000"	"1"	"1"	"1"	"569.30835"	"1137.60942"	"1137.61015"	"-0.64"	"-0.00037"	"6/62"	"6"	"62"	"26214244.1491699"	"HCD"	"MS2"	"0.1992132"	"434.1"	"36.588"	"36.6842"	"9924"	"9924"	"9907"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"649.6"	""	"605.9"	""	"664.2"	""	"588.9"	""	"789.4"	"823.4"	""	"728"	"37"	"35.000"	"28.000"	"0.00677799717745284"	""	"0.0003538"	"0.006412"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTQEDLR"	"[R].fTQEDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"569.30847"	"1137.60967"	"1137.61015"	"-0.43"	"-0.00024"	"5/62"	"5"	"62"	"3065686.67346191"	"HCD"	"MS2"	"17.71271"	"168.3"	"100.000"	"47.7994"	"14429"	"14429"	"14410"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"223.6"	""	"210.7"	""	"206.3"	""	"270.0"	"0.7"	"342.5"	"343.2"	""	"728"	"34"	"35.000"	"28.000"	"0.0150349290724419"	"25"	"0.003717"	"0.03863"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTQEDLR"	"[R].fTQEDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"2"	"2"	"0.5484"	"0.0000"	"1"	"1"	"1"	"569.30859"	"1137.60991"	"1137.61015"	"-0.21"	"-0.00012"	"5/62"	"5"	"62"	"3219126.70800781"	"HCD"	"MS2"	"20.57451"	"169.9"	"100.000"	"47.5863"	"14354"	"14354"	"14333"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"215.6"	""	"219.5"	""	"224.0"	""	"256.0"	""	"360.6"	"338.4"	""	"733"	"31"	"35.000"	"28.000"	"0.0264895133020195"	""	"0.004022"	"0.04269"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYEAGER"	"[R].aLYEAGER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"1"	"569.30872"	"1137.61016"	"1137.61015"	"0.00"	"0.00000"	"6/62"	"6"	"62"	"23383572.8691406"	"HCD"	"MS2"	"0"	"313.1"	"28.801"	"36.8576"	"9989"	"9989"	"9972"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"485.5"	"3.1"	"430.9"	""	"456.6"	""	"449.7"	""	"542.7"	"597.1"	""	"736"	"36"	"35.000"	"28.000"	"0.0102765613357534"	""	"0.0003538"	"0.007413"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYEAGER"	"[R].aLYEAGER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.4571"	"0.0000"	"1"	"1"	"1"	"569.30884"	"1137.61040"	"1137.61015"	"0.22"	"0.00012"	"6/62"	"6"	"62"	"8641523.01989746"	"HCD"	"MS2"	"6.293236"	"392.6"	"100.000"	"36.3737"	"9797"	"9797"	"9783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"605.7"	""	"538.2"	""	"548.7"	""	"595.3"	""	"714.3"	"722.5"	""	"736"	"35"	"35.000"	"28.000"	"0.0104435420246649"	""	"0.0003538"	"0.006621"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYEAGER"	"[R].aLYEAGER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"1"	"569.30896"	"1137.61064"	"1137.61015"	"0.43"	"0.00024"	"6/62"	"6"	"62"	"13797265.6862793"	"HCD"	"MS2"	"1.160338"	"628.3"	"100.000"	"36.5635"	"9868"	"9868"	"9848"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"987.5"	""	"893.5"	""	"931.4"	""	"930.0"	""	"1091.3"	"1115.1"	""	"736"	"36"	"35.000"	"28.000"	"0.0101589265108909"	""	"0.0003538"	"0.007419"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGITGLYR"	"[R].eGITGLYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P97521"	"Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1"	"P97521"	"Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"569.32611"	"1137.64495"	"1137.64654"	"-1.40"	"-0.00080"	"6/62"	"6"	"62"	"681140.643676758"	"HCD"	"MS2"	"50.29333"	"37.7"	"100.000"	"56.4875"	"17967"	"17967"	"17943"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.7"	""	"56.1"	""	"53.5"	""	"58.2"	"2.2"	"72.3"	"68.7"	""	"540"	"9"	"34.000"	"27.000"	"3.77019457485103"	"16"	"0.007686"	"0.09452"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGITGLYR"	"[R].eGITGLYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P97521"	"Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1"	"P97521"	"Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"569.32660"	"1137.64592"	"1137.64654"	"-0.54"	"-0.00031"	"6/62"	"6"	"62"	"659824.983703613"	"HCD"	"MS2"	"48.49725"	"34.0"	"100.000"	"56.3358"	"17919"	"17919"	"17894"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.7"	""	"46.9"	""	"50.4"	""	"57.6"	""	"63.8"	"67.6"	""	"538"	"6"	"34.000"	"27.000"	"7.09173142787028"	"18"	"0.006379"	"0.07224"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLQIYTR"	"[R].dLQIYTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"569.32660"	"1137.64592"	"1137.64654"	"-0.54"	"-0.00031"	"5/66"	"5"	"66"	"1357975.6217041"	"HCD"	"MS2"	"28.01546"	"64.8"	"100.000"	"55.4260"	"17548"	"17548"	"17527"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"86.5"	""	"86.3"	""	"89.3"	""	"92.9"	""	"110.6"	"149.5"	""	"538"	"33"	"34.000"	"27.000"	"0.0126110799797076"	"16"	"0.002871"	"0.02681"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLQIYTR"	"[R].dLQIYTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"569.32672"	"1137.64617"	"1137.64654"	"-0.33"	"-0.00019"	"5/66"	"5"	"66"	"899573.759277344"	"HCD"	"MS2"	"7.150429"	"44.2"	"100.000"	"55.7323"	"17673"	"17673"	"17651"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.3"	""	"54.4"	""	"56.8"	""	"63.3"	""	"80.4"	"105.3"	""	"538"	"31"	"34.000"	"27.000"	"0.023321274457896"	"17"	"0.00344"	"0.03251"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLQIYTR"	"[R].dLQIYTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"569.32690"	"1137.64653"	"1137.64654"	"-0.01"	"0.00000"	"5/66"	"5"	"66"	"907205.097167969"	"HCD"	"MS2"	"6.532516"	"47.6"	"100.000"	"55.9163"	"17734"	"17734"	"17713"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.4"	""	"66.3"	""	"63.2"	""	"73.5"	""	"86.0"	"106.9"	""	"556"	"27"	"34.000"	"27.000"	"0.0543306368705559"	"18"	"0.003922"	"0.04057"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLQIYTR"	"[R].dLQIYTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"569.32751"	"1137.64775"	"1137.64654"	"1.07"	"0.00061"	"5/66"	"5"	"66"	"1351953.43011475"	"HCD"	"MS2"	"35.11725"	"66.3"	"100.000"	"55.6214"	"17614"	"17614"	"17586"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"88.6"	""	"92.1"	""	"92.1"	""	"92.5"	""	"128.1"	"136.8"	""	"533"	"27"	"34.000"	"27.000"	"0.0525650659174608"	"20"	"0.003449"	"0.03318"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DASATSK"	"[K].dASATSk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"569.32904"	"1137.65080"	"1137.65157"	"-0.68"	"-0.00038"	"6/58"	"6"	"58"	"2511438.91400146"	"HCD"	"MS2"	"13.22889"	"198.2"	"100.000"	"23.3397"	"4528"	"4528"	"4499"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"269.9"	""	"209.9"	""	"189.1"	""	"360.6"	""	"437.9"	"421.3"	""	"551"	"36"	"34.000"	"27.000"	"0.00698427937702173"	"19"	"0.0023"	"0.02296"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DASATSK"	"[K].dASATSk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"569.32947"	"1137.65166"	"1137.65157"	"0.07"	"0.00004"	"6/58"	"6"	"58"	"2293614.76379395"	"HCD"	"MS2"	"15.72988"	"190.3"	"100.000"	"23.3995"	"4535"	"4535"	"4511"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"244.0"	""	"203.7"	""	"177.6"	""	"357.6"	""	"406.3"	"424.4"	""	"554"	"26"	"34.000"	"27.000"	"0.0633110868534995"	"16"	"0.003967"	"0.04252"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYDVEIR"	"[K].dYDVEIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PEC0"	"Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] OS=Rattus norvegicus OX=10116 GN=Nudt2 PE=2 SV=3"	"Q6PEC0"	"Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] OS=Rattus norvegicus OX=10116 GN=Nudt2 PE=2 SV=3"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"569.80042"	"1138.59355"	"1138.59417"	"-0.54"	"-0.00031"	"9/56"	"9"	"56"	"1311477.23516846"	"HCD"	"MS2"	"44.63988"	"64.8"	"100.000"	"51.7841"	"16065"	"16065"	"16037"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.5"	""	"81.2"	""	"89.2"	""	"101.1"	""	"121.1"	"117.2"	""	"586"	"27"	"34.000"	"27.000"	"0.0648436749914452"	"22"	"0.0023"	"0.02338"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESFEGSVR"	"[K].eSFEGSVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"570.29846"	"1139.58965"	"1139.58942"	"0.20"	"0.00011"	"6/66"	"6"	"66"	"1520333.30810547"	"HCD"	"MS2"	"24.2872"	"101.8"	"100.000"	"35.7283"	"9531"	"9531"	"9514"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"141.3"	""	"95.4"	""	"111.7"	""	"201.3"	""	"197.8"	"222.8"	""	"557"	"20"	"34.000"	"27.000"	"0.252828017654625"	"19"	"0.002937"	"0.02725"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTYGSDR"	"[K].lVTYGSDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"570.31573"	"1139.62419"	"1139.62580"	"-1.41"	"-0.00081"	"7/64"	"7"	"64"	"840116.42364502"	"HCD"	"MS2"	"25.31429"	"60.8"	"100.000"	"43.4448"	"12674"	"12674"	"12649"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.4"	""	"75.6"	""	"81.6"	""	"92.4"	"1.8"	"112.8"	"131.5"	""	"484"	"23"	"33.000"	"26.000"	"0.120452374564902"	"22"	"0.004069"	"0.04478"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTYGSDR"	"[K].lVTYGSDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"570.31604"	"1139.62480"	"1139.62580"	"-0.88"	"-0.00050"	"6/64"	"6"	"64"	"1065147.17315674"	"HCD"	"MS2"	"0"	"73.7"	"100.000"	"43.5098"	"12690"	"12690"	"12666"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"109.4"	""	"95.3"	""	"99.1"	""	"116.9"	"6.7"	"127.4"	"143.9"	""	"482"	"29"	"33.000"	"26.000"	"0.0318432247838965"	"24"	"0.001036"	"0.01351"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTYGSDR"	"[K].lVTYGSDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"570.31976"	"1139.63225"	"1139.62580"	"5.66"	"0.00322"	"7/64"	"7"	"64"	"1608253.86804199"	"HCD"	"MS2"	"17.13751"	"125.1"	"100.000"	"43.2066"	"12566"	"12566"	"12540"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"147.2"	""	"133.4"	""	"148.8"	""	"195.1"	""	"240.9"	"325.4"	""	"487"	"20"	"33.000"	"26.000"	"0.244061325471969"	"20"	"0.006769"	"0.07948"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTYGSDR"	"[K].lVTYGSDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"570.32086"	"1139.63445"	"1139.62580"	"7.58"	"0.00432"	"6/64"	"6"	"64"	"1767393.17279053"	"HCD"	"MS2"	"0"	"131.2"	"100.000"	"43.1165"	"12540"	"12540"	"12515"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"167.5"	""	"129.4"	""	"174.9"	""	"219.2"	""	"238.7"	"316.9"	""	"487"	"30"	"33.000"	"26.000"	"0.023795726330274"	"26"	"0.005001"	"0.05696"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSTIYNTR"	"[K].gSTIYNTR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07803"	"Elongation factor G, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gfm1 PE=1 SV=2"	"Q07803"	"Elongation factor G, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gfm1 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"570.81812"	"1140.62895"	"1140.62105"	"6.93"	"0.00395"	"7/70"	"7"	"70"	"1737458.04101563"	"HCD"	"MS2"	"0"	"143.5"	"100.000"	"28.5840"	"6643"	"6643"	"6624"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"208.4"	""	"157.1"	""	"190.6"	""	"234.2"	""	"282.3"	"289.5"	""	"474"	"21"	"33.000"	"26.000"	"0.199870337590133"	"17"	"0.007627"	"0.09287"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSTIYNTR"	"[K].gSTIYNTR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07803"	"Elongation factor G, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gfm1 PE=1 SV=2"	"Q07803"	"Elongation factor G, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gfm1 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"570.81836"	"1140.62944"	"1140.62105"	"7.35"	"0.00419"	"7/70"	"7"	"70"	"1699856.8581543"	"HCD"	"MS2"	"0"	"140.2"	"100.000"	"28.5822"	"6629"	"6629"	"6601"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"213.4"	""	"171.3"	""	"171.5"	""	"219.8"	""	"269.5"	"285.4"	""	"466"	"18"	"33.000"	"26.000"	"0.383138611509079"	"18"	"0.008478"	"0.103"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGHEATVGK"	"[R].LGHEATVGk.[A]"	"K9(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"570.83197"	"1140.65666"	"1140.65744"	"-0.68"	"-0.00039"	"6/68"	"6"	"68"	"645341.291931152"	"HCD"	"MS2"	"0"	"41.5"	"100.000"	"21.6719"	"3849"	"3849"	"3831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.5"	""	"65.2"	""	"45.6"	""	"47.9"	""	"54.3"	"127.6"	""	"325"	"36"	"32.000"	"25.000"	"0.00379186935120663"	"15"	"0.000936"	"0.01282"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGHEATVGK"	"[R].LGHEATVGk.[A]"	"K9(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"570.83197"	"1140.65666"	"1140.65744"	"-0.68"	"-0.00039"	"7/68"	"7"	"68"	"601441.134338379"	"HCD"	"MS2"	"100"	"40.9"	"100.000"	"21.6950"	"3841"	"3841"	"3818"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.1"	""	"62.3"	""	"49.1"	""	"47.0"	""	"68.4"	"105.0"	""	"325"	"25"	"32.000"	"25.000"	"0.0494143816672395"	"14"	"0.000936"	"0.01141"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSDGYGSGR"	"[R].gGSDGYGSGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.27515"	"1141.54302"	"1141.54353"	"-0.45"	"-0.00026"	"6/82"	"6"	"82"	"852967.450622559"	"HCD"	"MS2"	"68.93738"	"67.4"	"100.000"	"20.5374"	"3389"	"3389"	"3366"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"84.5"	""	"67.0"	""	"62.6"	""	"155.0"	""	"149.6"	"126.0"	""	"225"	"8"	"30.000"	"23.000"	"1.90174604809867"	"13"	"0.006443"	"0.07253"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSDGYGSGR"	"[R].gGSDGYGSGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"571.27527"	"1141.54326"	"1141.54353"	"-0.24"	"-0.00014"	"8/82"	"8"	"82"	"1502469.1776123"	"HCD"	"MS2"	"19.79052"	"102.2"	"100.000"	"20.5957"	"3399"	"3399"	"3378"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.8"	""	"102.5"	""	"94.0"	""	"236.3"	"0.1"	"217.8"	"194.8"	""	"223"	"28"	"30.000"	"23.000"	"0.0197822127119253"	"15"	"0"	"0.0009067"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYTGEMGR"	"[K].vYTGEMGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"571.29675"	"1141.58623"	"1141.58731"	"-0.95"	"-0.00054"	"7/60"	"7"	"60"	"5292499.63226318"	"HCD"	"MS2"	"11.52461"	"284.8"	"100.000"	"39.9605"	"11254"	"11254"	"11236"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"422.3"	""	"410.0"	""	"378.1"	""	"301.6"	""	"588.5"	"602.9"	""	"430"	"24"	"33.000"	"26.000"	"0.0787840785492842"	"19"	"0.007752"	"0.09499"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYTGEMGR"	"[K].vYTGEMGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"571.29724"	"1141.58721"	"1141.58731"	"-0.09"	"-0.00005"	"7/60"	"7"	"60"	"5108040.32220459"	"HCD"	"MS2"	"7.512266"	"261.9"	"100.000"	"40.1520"	"11323"	"11323"	"11305"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"383.8"	""	"375.8"	""	"349.6"	""	"298.4"	"0.1"	"522.5"	"554.6"	""	"446"	"25"	"33.000"	"26.000"	"0.067811736072581"	"16"	"0.00736"	"0.08509"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YATSVSER"	"[K].yATSVSER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3B7T9"	"Rab11 family-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Rab11fip1 PE=1 SV=1"	"Q3B7T9"	"Rab11 family-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Rab11fip1 PE=1 SV=1"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"571.30560"	"1141.60393"	"1141.60507"	"-1.00"	"-0.00057"	"6/64"	"6"	"64"	"1130294.34716797"	"HCD"	"MS2"	"23.94939"	"96.4"	"100.000"	"28.4628"	"6580"	"6580"	"6553"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"119.3"	""	"120.3"	""	"110.9"	""	"170.7"	""	"197.8"	"198.1"	""	"480"	"9"	"33.000"	"26.000"	"2.71151019521471"	"20"	"0.009594"	"0.1263"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSDAHLDR"	"[R].vSDAHLDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"381.21222"	"1141.62210"	"1141.61630"	"5.08"	"0.00193"	"6/66"	"6"	"66"	"49323508.5041504"	"HCD"	"MS2"	"48.98719"	"358.8"	"17.137"	"25.3558"	"5319"	"5319"	"5302"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"385.4"	""	"420.6"	""	"317.5"	""	"554.1"	""	"634.5"	"1109.9"	""	"442"	"20"	"33.000"	"26.000"	"0.221509457615216"	"17"	"0.008052"	"0.09833"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSDAHLDR"	"[R].vSDAHLDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"381.21228"	"1141.62229"	"1141.61630"	"5.24"	"0.00200"	"7/66"	"7"	"66"	"53267486.5761719"	"HCD"	"MS2"	"50.15229"	"389.1"	"18.135"	"25.2728"	"5300"	"5300"	"5283"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"414.9"	""	"455.9"	""	"340.4"	""	"614.8"	""	"686.8"	"1191.0"	""	"442"	"22"	"33.000"	"26.000"	"0.154665081116502"	"16"	"0.005617"	"0.06365"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].VHLTDAEk.[A]"	"K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.32306"	"1141.63884"	"1141.64145"	"-2.29"	"-0.00131"	"5/62"	"5"	"62"	"735269.378356934"	"HCD"	"MS2"	"0"	"41.4"	"100.000"	"26.2802"	"5708"	"5708"	"5690"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.2"	""	"44.6"	""	"36.9"	""	"71.9"	""	"76.6"	"117.6"	""	"435"	"36"	"33.000"	"26.000"	"0.00540081450401787"	"15"	"0.005119"	"0.05851"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].VHLTDAEk.[A]"	"K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"571.32318"	"1141.63909"	"1141.64145"	"-2.07"	"-0.00118"	"6/62"	"6"	"62"	"567046.771484375"	"HCD"	"MS2"	"0"	"43.5"	"100.000"	"29.3951"	"6960"	"6960"	"6934"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.6"	""	"44.5"	""	"52.3"	""	"86.9"	"1.0"	"86.1"	"81.0"	""	"437"	"38"	"33.000"	"26.000"	"0.00315102204308184"	"26"	"0.007147"	"0.08234"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].VHLTDAEk.[A]"	"K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"571.32355"	"1141.63982"	"1141.64145"	"-1.43"	"-0.00082"	"6/62"	"6"	"62"	"1245408.23303223"	"HCD"	"MS2"	"0"	"60.2"	"100.000"	"25.6699"	"5461"	"5461"	"5434"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.4"	""	"52.8"	""	"61.5"	""	"93.8"	""	"101.6"	"191.2"	""	"405"	"51"	"33.000"	"26.000"	"0.000166121187726788"	"20"	"0.0008629"	"0.009808"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].VHLTDAEk.[A]"	"K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"571.32373"	"1141.64018"	"1141.64145"	"-1.11"	"-0.00063"	"7/62"	"7"	"62"	"19066064.0491943"	"HCD"	"MS2"	"0"	"570.5"	"100.000"	"24.8325"	"5107"	"5107"	"5089"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"588.1"	""	"557.1"	""	"282.4"	""	"893.9"	""	"729.2"	"2402.0"	""	"403"	"64"	"33.000"	"26.000"	"7.34979203055101E-06"	"21"	"0"	"0.003262"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].VHLTDAEk.[A]"	"K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"571.32379"	"1141.64031"	"1141.64145"	"-1.01"	"-0.00057"	"6/62"	"6"	"62"	"2626396.33355713"	"HCD"	"MS2"	"39.36628"	"113.9"	"100.000"	"25.3646"	"5337"	"5337"	"5313"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"130.0"	""	"117.1"	""	"104.8"	""	"188.3"	"0.0"	"202.6"	"340.6"	""	"403"	"50"	"33.000"	"26.000"	"0.000194659252116448"	"20"	"0.001211"	"0.01531"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].VHLTDAEk.[A]"	"K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.32385"	"1141.64043"	"1141.64145"	"-0.90"	"-0.00051"	"7/62"	"7"	"62"	"19102151.0979614"	"HCD"	"MS2"	"0"	"576.5"	"100.000"	"24.7541"	"5091"	"5091"	"5071"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"609.6"	""	"555.4"	""	"290.7"	""	"863.8"	""	"733.0"	"2454.0"	""	"403"	"53"	"33.000"	"26.000"	"0.000112272928409784"	"16"	"0"	"0.003261"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].VHLTDAEk.[A]"	"K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.32397"	"1141.64067"	"1141.64145"	"-0.68"	"-0.00039"	"6/62"	"6"	"62"	"729617.878417969"	"HCD"	"MS2"	"30.10479"	"50.7"	"100.000"	"27.9120"	"6356"	"6356"	"6326"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.1"	""	"50.7"	""	"65.7"	""	"97.9"	"0.1"	"93.9"	"112.3"	""	"403"	"33"	"33.000"	"26.000"	"0.00951207028146136"	"15"	"0.005001"	"0.05674"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].VHLTDAEk.[A]"	"K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"571.32397"	"1141.64067"	"1141.64145"	"-0.68"	"-0.00039"	"6/62"	"6"	"62"	"1140664.35571289"	"HCD"	"MS2"	"0"	"51.2"	"100.000"	"25.7919"	"5496"	"5496"	"5467"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.1"	""	"50.4"	""	"40.0"	""	"79.4"	""	"89.4"	"178.2"	""	"403"	"47"	"33.000"	"26.000"	"0.000376075507703186"	"20"	"0.001211"	"0.01456"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].VHLTDAEk.[A]"	"K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.2069"	"0.0000"	"1"	"1"	"1"	"571.32397"	"1141.64067"	"1141.64145"	"-0.68"	"-0.00039"	"6/62"	"6"	"62"	"1150940.8638916"	"HCD"	"MS2"	"13.11783"	"47.9"	"100.000"	"26.0878"	"5616"	"5616"	"5595"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.2"	""	"48.1"	""	"44.6"	""	"90.7"	""	"91.1"	"131.4"	""	"403"	"29"	"33.000"	"26.000"	"0.0245626404183361"	"14"	"0.001886"	"0.02188"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].VHLTDAEk.[A]"	"K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"571.32404"	"1141.64079"	"1141.64145"	"-0.58"	"-0.00033"	"6/62"	"6"	"62"	"2980336.59423828"	"HCD"	"MS2"	"39.695"	"125.6"	"100.000"	"25.4131"	"5342"	"5342"	"5318"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"142.7"	""	"144.2"	""	"111.9"	""	"202.0"	""	"217.8"	"380.2"	""	"403"	"50"	"33.000"	"26.000"	"0.000206193537944572"	"19"	"0.001465"	"0.01827"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].VHLTDAEk.[A]"	"K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.32404"	"1141.64079"	"1141.64145"	"-0.58"	"-0.00033"	"7/62"	"7"	"62"	"23706516.8486328"	"HCD"	"MS2"	"0"	"357.1"	"51.399"	"25.0337"	"5202"	"5202"	"5190"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"354.6"	""	"318.9"	""	"205.2"	""	"539.1"	""	"480.8"	"1515.0"	""	"403"	"53"	"33.000"	"26.000"	"0.000106973215512544"	"16"	"0.0002479"	"0.005612"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].VHLTDAEk.[A]"	"K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"1"	"571.32416"	"1141.64104"	"1141.64145"	"-0.36"	"-0.00021"	"5/62"	"5"	"62"	"1045814.91412354"	"HCD"	"MS2"	"0"	"44.6"	"100.000"	"25.9705"	"5584"	"5584"	"5559"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.6"	""	"51.6"	""	"37.0"	""	"74.0"	""	"72.1"	"140.0"	""	"403"	"32"	"33.000"	"26.000"	"0.0128906569349754"	"14"	"0.007602"	"0.09065"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].VHLTDAEk.[A]"	"K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.32428"	"1141.64128"	"1141.64145"	"-0.15"	"-0.00009"	"6/62"	"6"	"62"	"23315571.6762695"	"HCD"	"MS2"	"0"	"322.4"	"46.321"	"25.1123"	"5220"	"5220"	"5204"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"316.8"	""	"285.0"	""	"177.1"	""	"474.8"	""	"431.2"	"1398.4"	""	"418"	"52"	"33.000"	"26.000"	"0.000134941733868243"	"16"	"0.0002479"	"0.005788"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIEIPEVR"	"[R].gIEIPEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"571.34186"	"1141.67644"	"1141.67784"	"-1.23"	"-0.00070"	"10/62"	"10"	"62"	"2302977.27893066"	"HCD"	"MS2"	"0"	"87.8"	"100.000"	"72.1329"	"24311"	"24311"	"24293"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"151.5"	""	"125.3"	""	"127.0"	""	"137.9"	""	"150.6"	"143.3"	""	"310"	"33"	"31.000"	"24.000"	"0.00748741143161648"	""	"0.0008629"	"0.01046"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIEIPEVR"	"[R].gIEIPEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"571.34210"	"1141.67693"	"1141.67784"	"-0.80"	"-0.00046"	"6/62"	"6"	"62"	"800736.610107422"	"HCD"	"MS2"	"29.1716"	"38.3"	"100.000"	"72.8999"	"24610"	"24610"	"24591"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.0"	""	"50.7"	""	"56.2"	""	"58.4"	""	"65.5"	"80.5"	""	"310"	"16"	"31.000"	"24.000"	"0.412412384268815"	"18"	"0.002871"	"0.02689"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIEIPEVR"	"[R].gIEIPEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"571.34229"	"1141.67729"	"1141.67784"	"-0.48"	"-0.00027"	"7/62"	"7"	"62"	"690748.644348145"	"HCD"	"MS2"	"31.88322"	"31.2"	"100.000"	"71.9918"	"24240"	"24240"	"24219"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.2"	""	"43.8"	""	"49.7"	""	"53.2"	""	"53.4"	"52.4"	""	"310"	"21"	"31.000"	"24.000"	"0.131018220999845"	"19"	"0.002547"	"0.02532"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIEIPEVR"	"[R].gIEIPEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"571.34229"	"1141.67729"	"1141.67784"	"-0.48"	"-0.00027"	"10/62"	"10"	"62"	"3032460.40179443"	"HCD"	"MS2"	"11.80666"	"116.1"	"100.000"	"72.4441"	"24438"	"24438"	"24420"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"180.2"	""	"162.3"	""	"160.7"	""	"180.8"	"0.4"	"197.4"	"217.6"	""	"310"	"35"	"31.000"	"24.000"	"0.0052039330207658"	""	"0"	"0.002959"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIEIPEVR"	"[R].gIEIPEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"571.34235"	"1141.67742"	"1141.67784"	"-0.37"	"-0.00021"	"10/62"	"10"	"62"	"2509442.31359863"	"HCD"	"MS2"	"7.483355"	"98.5"	"100.000"	"72.2915"	"24363"	"24363"	"24346"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"176.8"	""	"139.8"	""	"149.5"	""	"147.5"	""	"154.6"	"168.5"	""	"310"	"32"	"31.000"	"24.000"	"0.0106495608202206"	""	"0.0003538"	"0.007233"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIEIPEVR"	"[R].gIEIPEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.5484"	"0.0000"	"1"	"1"	"1"	"571.34235"	"1141.67742"	"1141.67784"	"-0.37"	"-0.00021"	"10/62"	"10"	"62"	"2938836.62689209"	"HCD"	"MS2"	"7.266693"	"115.6"	"100.000"	"72.5889"	"24484"	"24484"	"24471"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"183.6"	""	"160.8"	""	"179.9"	""	"172.0"	""	"189.9"	"207.8"	""	"310"	"31"	"31.000"	"24.000"	"0.0111002228583"	""	"0.001036"	"0.01358"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIEIPEVR"	"[R].gIEIPEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"571.34259"	"1141.67790"	"1141.67784"	"0.06"	"0.00003"	"4/62"	"4"	"62"	"874617.172973633"	"HCD"	"MS2"	"26.53192"	"39.3"	"100.000"	"72.7532"	"24564"	"24564"	"24545"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.3"	""	"52.0"	""	"57.1"	""	"52.8"	"0.4"	"77.7"	"78.7"	""	"327"	"20"	"32.000"	"25.000"	"0.166156661284359"	"21"	"0.001374"	"0.01621"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGYGEGFR"	"[R].qGYGEGFR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"571.79272"	"1142.57817"	"1142.57919"	"-0.89"	"-0.00051"	"6/70"	"6"	"70"	"6224203.0826416"	"HCD"	"MS2"	"7.568444"	"314.3"	"100.000"	"35.3158"	"9368"	"9368"	"9350"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"510.3"	""	"425.7"	""	"479.1"	""	"496.9"	""	"549.3"	"516.1"	""	"325"	"34"	"32.000"	"25.000"	"0.00675854742052785"	"20"	"0.0002479"	"0.005462"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGYGEGFR"	"[R].qGYGEGFR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"571.79333"	"1142.57939"	"1142.57919"	"0.18"	"0.00010"	"6/70"	"6"	"70"	"5554792.68450928"	"HCD"	"MS2"	"0"	"274.5"	"100.000"	"35.4025"	"9398"	"9398"	"9378"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"478.0"	""	"367.2"	""	"400.1"	""	"439.6"	""	"471.2"	"439.8"	""	"328"	"34"	"32.000"	"25.000"	"0.0066656705983095"	"17"	"0"	"0.003335"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGSSSSSFR"	"[R].vGSSSSSFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"571.80298"	"1142.59868"	"1142.60032"	"-1.43"	"-0.00082"	"7/72"	"7"	"72"	"2406431.76190186"	"HCD"	"MS2"	"0"	"120.5"	"100.000"	"29.4800"	"6994"	"6994"	"6975"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"134.5"	""	"136.8"	""	"149.9"	""	"268.6"	""	"229.7"	"224.5"	""	"356"	"40"	"32.000"	"25.000"	"0.00189417457243928"	"24"	"0"	"0.0007155"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGSSSSSFR"	"[R].vGSSSSSFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"571.80304"	"1142.59880"	"1142.60032"	"-1.33"	"-0.00076"	"8/72"	"8"	"72"	"1313103.5581665"	"HCD"	"MS2"	"0"	"76.3"	"100.000"	"29.4106"	"6978"	"6978"	"6959"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"88.1"	""	"83.3"	""	"90.1"	""	"151.7"	""	"151.5"	"160.6"	""	"356"	"30"	"32.000"	"25.000"	"0.016881848646756"	"17"	"0"	"0.0009735"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGSSSSSFR"	"[R].vGSSSSSFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.80365"	"1142.60002"	"1142.60032"	"-0.26"	"-0.00015"	"7/72"	"7"	"72"	"2198145.97595215"	"HCD"	"MS2"	"8.828473"	"126.6"	"100.000"	"29.7322"	"7108"	"7108"	"7089"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"163.3"	""	"149.5"	""	"169.8"	""	"230.7"	"1.0"	"246.1"	"240.2"	""	"356"	"20"	"32.000"	"25.000"	"0.188547163081558"	"14"	"0.0002479"	"0.005349"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQPGAPEAP"	"[R].fQPGAPEAP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"571.80536"	"1142.60344"	"1142.60434"	"-0.79"	"-0.00045"	"8/64"	"8"	"64"	"1074776.73443604"	"HCD"	"MS2"	"38.7116"	"24.3"	"100.000"	"67.8530"	"22567"	"22567"	"22546"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.8"	""	"33.6"	""	"31.6"	""	"41.3"	"0.9"	"47.2"	"40.7"	""	"340"	"52"	"32.000"	"25.000"	"0.000107262748561633"	""	"0"	"0.0008376"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQPGAPEAP"	"[R].fQPGAPEAP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.8769"	"0.0000"	"1"	"1"	"1"	"571.80542"	"1142.60356"	"1142.60434"	"-0.68"	"-0.00039"	"8/64"	"8"	"64"	"1421325.83337402"	"HCD"	"MS2"	"19.73402"	"26.7"	"100.000"	"68.0275"	"22624"	"22624"	"22599"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.5"	""	"32.3"	""	"34.7"	""	"40.4"	"0.2"	"54.2"	"55.8"	""	"341"	"65"	"32.000"	"25.000"	"5.40411252448916E-06"	"25"	"0"	"0.0002451"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQPGAPEAP"	"[R].fQPGAPEAP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.7736"	"0.0000"	"1"	"1"	"1"	"571.80548"	"1142.60369"	"1142.60434"	"-0.57"	"-0.00033"	"8/64"	"8"	"64"	"4261626.78857422"	"HCD"	"MS2"	"18.83952"	"80.2"	"100.000"	"68.4620"	"22816"	"22816"	"22799"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"108.7"	""	"90.7"	""	"89.6"	""	"213.7"	"1.7"	"130.9"	"126.2"	""	"341"	"53"	"32.000"	"25.000"	"8.96859439196155E-05"	""	"0.0001301"	"0.004119"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQPGAPEAP"	"[R].fQPGAPEAP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"571.80548"	"1142.60369"	"1142.60434"	"-0.57"	"-0.00033"	"5/64"	"5"	"64"	"3752601.28485107"	"HCD"	"MS2"	"50.97367"	"80.2"	"100.000"	"68.4687"	"22818"	"22818"	"22799"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"108.7"	""	"90.7"	""	"89.6"	""	"213.7"	"1.7"	"130.9"	"126.2"	""	"341"	"15"	"32.000"	"25.000"	"0.579061089766647"	"21"	"0.004942"	"0.05352"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQPGAPEAP"	"[R].fQPGAPEAP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"571.80554"	"1142.60381"	"1142.60434"	"-0.47"	"-0.00027"	"7/64"	"7"	"64"	"8371730.4979248"	"HCD"	"MS2"	"2.066929"	"88.3"	"100.000"	"68.1484"	"22688"	"22688"	"22671"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"136.3"	""	"134.6"	""	"136.6"	""	"126.1"	""	"157.6"	"149.6"	""	"337"	"64"	"32.000"	"25.000"	"6.61606716148325E-06"	""	"0"	"0.0004474"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQPGAPEAP"	"[R].fQPGAPEAP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"571.80573"	"1142.60417"	"1142.60434"	"-0.15"	"-0.00008"	"7/64"	"7"	"64"	"4225579.38336182"	"HCD"	"MS2"	"25.12915"	"74.4"	"100.000"	"68.6294"	"22870"	"22870"	"22853"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"89.1"	""	"82.1"	""	"69.7"	""	"233.9"	"1.6"	"113.7"	"114.3"	""	"338"	"41"	"32.000"	"25.000"	"0.00140244779709937"	""	"0"	"0.002444"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQPGAPEAP"	"[R].fQPGAPEAP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.9077"	"0.0000"	"1"	"1"	"1"	"571.80585"	"1142.60442"	"1142.60434"	"0.07"	"0.00004"	"8/64"	"8"	"64"	"7811176.78186035"	"HCD"	"MS2"	"2.044602"	"87.8"	"100.000"	"68.3181"	"22743"	"22743"	"22726"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"139.4"	""	"128.9"	""	"128.8"	""	"136.9"	""	"147.3"	"150.1"	""	"336"	"65"	"32.000"	"25.000"	"5.06185012063269E-06"	"22"	"0"	"0.0001328"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASPPLEGSR"	"[R].aSPPLEGSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"571.82129"	"1142.63530"	"1142.63670"	"-1.23"	"-0.00070"	"7/76"	"7"	"76"	"4740847.56762695"	"HCD"	"MS2"	"12.57034"	"206.9"	"100.000"	"29.9715"	"7194"	"7194"	"7165"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"329.5"	""	"314.3"	""	"263.0"	""	"304.6"	""	"394.5"	"355.4"	""	"392"	"22"	"32.000"	"25.000"	"0.115413356449695"	"14"	"0.004676"	"0.05025"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAPEGVIDR"	"[K].gAPEGVIDR.[C]"	"N-Term(TMT6plex)"	"2"	"2"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"571.82141"	"1142.63555"	"1142.63670"	"-1.01"	"-0.00058"	"6/72"	"6"	"72"	"6010009.46832275"	"HCD"	"MS2"	"14.08238"	"269.2"	"100.000"	"36.7002"	"9930"	"9930"	"9907"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"316.4"	""	"284.5"	""	"290.5"	""	"379.3"	""	"493.2"	"800.1"	""	"392"	"33"	"32.000"	"25.000"	"0.00931657042847898"	"22"	"0"	"0.00211"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASPPLEGSR"	"[R].aSPPLEGSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.82147"	"1142.63567"	"1142.63670"	"-0.91"	"-0.00052"	"7/76"	"7"	"76"	"4465594.1272583"	"HCD"	"MS2"	"13.79782"	"199.5"	"100.000"	"29.9114"	"7181"	"7181"	"7155"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"325.9"	""	"287.4"	""	"269.7"	""	"290.9"	"0.6"	"364.7"	"349.5"	""	"392"	"22"	"32.000"	"25.000"	"0.132817735491692"	"14"	"0.005183"	"0.05878"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAPEGVIDR"	"[K].gAPEGVIDR.[C]"	"N-Term(TMT6plex)"	"2"	"2"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"571.82178"	"1142.63628"	"1142.63670"	"-0.37"	"-0.00021"	"8/72"	"8"	"72"	"5530805.89178467"	"HCD"	"MS2"	"9.746896"	"249.2"	"100.000"	"36.8736"	"9995"	"9995"	"9972"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"280.4"	""	"246.3"	""	"288.6"	""	"354.9"	""	"454.4"	"748.9"	""	"392"	"34"	"32.000"	"25.000"	"0.0070025476277778"	"23"	"0"	"0.002711"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDPQGLR"	"[K].eVDPQGLR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"571.82184"	"1142.63640"	"1142.63670"	"-0.27"	"-0.00015"	"5/66"	"5"	"66"	"3250322.15753174"	"HCD"	"MS2"	"0"	"136.0"	"100.000"	"39.8600"	"11204"	"11204"	"11181"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"209.6"	""	"181.3"	""	"177.2"	""	"224.0"	""	"259.8"	"239.6"	""	"408"	"36"	"33.000"	"26.000"	"0.00568368718400474"	"22"	"0"	"0.002761"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDPQGLR"	"[K].eVDPQGLR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"571.82196"	"1142.63664"	"1142.63670"	"-0.05"	"-0.00003"	"5/66"	"5"	"66"	"2654233.47491455"	"HCD"	"MS2"	"0"	"118.3"	"100.000"	"39.6339"	"11121"	"11121"	"11094"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"197.7"	""	"155.2"	""	"149.7"	""	"198.5"	"0.9"	"213.5"	"204.5"	""	"403"	"33"	"33.000"	"26.000"	"0.0103818571883224"	"19"	"0"	"0.002736"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDPQGLR"	"[K].eVDPQGLR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"571.82214"	"1142.63701"	"1142.63670"	"0.27"	"0.00015"	"10/66"	"10"	"66"	"4202238.31414795"	"HCD"	"MS2"	"25.1677"	"207.5"	"100.000"	"39.9284"	"11241"	"11241"	"11220"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"299.2"	""	"302.1"	""	"299.0"	""	"251.1"	""	"387.6"	"436.0"	""	"401"	"9"	"33.000"	"26.000"	"2.6309607975335"	"19"	"0.00413"	"0.04575"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYNGLQGY"	"[K].vYnGLQGY.[-]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q6TUG0"	"DnaJ homolog subfamily B member 11 OS=Rattus norvegicus OX=10116 GN=Dnajb11 PE=2 SV=1"	"Q6TUG0"	"DnaJ homolog subfamily B member 11 OS=Rattus norvegicus OX=10116 GN=Dnajb11 PE=2 SV=1"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"572.29755"	"1143.58782"	"1143.58836"	"-0.47"	"-0.00027"	"6/64"	"6"	"64"	"761485.167114258"	"HCD"	"MS2"	"9.798271"	"17.1"	"100.000"	"82.2419"	"28386"	"28386"	"28370"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.9"	""	"23.0"	""	"22.8"	""	"30.9"	""	"32.9"	"36.3"	""	"359"	"32"	"32.000"	"25.000"	"0.0122762140687017"	"14"	"0.000936"	"0.01228"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYNGLQGY"	"[K].vYnGLQGY.[-]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q6TUG0"	"DnaJ homolog subfamily B member 11 OS=Rattus norvegicus OX=10116 GN=Dnajb11 PE=2 SV=1"	"Q6TUG0"	"DnaJ homolog subfamily B member 11 OS=Rattus norvegicus OX=10116 GN=Dnajb11 PE=2 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"572.29755"	"1143.58782"	"1143.58836"	"-0.47"	"-0.00027"	"5/64"	"5"	"64"	"886926.122619629"	"HCD"	"MS2"	"5.59919"	"18.3"	"100.000"	"82.1996"	"28366"	"28366"	"28358"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.1"	""	"21.8"	""	"26.7"	""	"32.3"	""	"34.5"	"37.9"	""	"359"	"35"	"32.000"	"25.000"	"0.00535876180095774"	"15"	"0.0002479"	"0.005923"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYVTTSTR"	"[R].sYVTTSTR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"572.31335"	"1143.61943"	"1143.62072"	"-1.12"	"-0.00064"	"7/68"	"7"	"68"	"6005213.1138916"	"HCD"	"MS2"	"8.611828"	"278.8"	"100.000"	"27.1427"	"6058"	"6058"	"6039"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"192.1"	""	"338.6"	""	"249.2"	""	"577.0"	""	"688.2"	"616.3"	""	"481"	"38"	"33.000"	"26.000"	"0.00348429630777515"	"18"	"0.0003538"	"0.006282"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYVTTSTR"	"[R].sYVTTSTR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"572.31360"	"1143.61992"	"1143.62072"	"-0.70"	"-0.00040"	"7/68"	"7"	"68"	"6497575.62982178"	"HCD"	"MS2"	"7.865644"	"293.5"	"100.000"	"27.2052"	"6068"	"6068"	"6049"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"211.3"	""	"344.4"	""	"270.6"	""	"612.8"	"3.2"	"729.1"	"625.4"	""	"481"	"37"	"33.000"	"26.000"	"0.00473276652674496"	"19"	"0.0002479"	"0.005165"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYVTTSTR"	"[R].sYVTTSTR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"572.31372"	"1143.62016"	"1143.62072"	"-0.48"	"-0.00028"	"5/68"	"5"	"68"	"2201713.00878906"	"HCD"	"MS2"	"2.783694"	"114.5"	"100.000"	"27.5195"	"6195"	"6195"	"6175"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.7"	""	"147.1"	""	"106.1"	""	"231.0"	""	"268.8"	"258.3"	""	"481"	"33"	"33.000"	"26.000"	"0.0108421417442221"	"25"	"0.0003538"	"0.006645"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYVTTSTR"	"[R].sYVTTSTR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"572.31372"	"1143.62016"	"1143.62072"	"-0.48"	"-0.00028"	"5/68"	"5"	"68"	"2629113.621521"	"HCD"	"MS2"	"4.493809"	"133.5"	"100.000"	"27.4544"	"6184"	"6184"	"6163"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"98.8"	""	"148.8"	""	"126.4"	""	"263.7"	""	"332.5"	"306.6"	""	"481"	"34"	"33.000"	"26.000"	"0.0101651801730877"	"19"	"0.0002479"	"0.005239"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVSVPELR"	"[R].dVSVPELR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P56522"	"NADPH:adrenodoxin oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fdxr PE=1 SV=1"	"P56522"	"NADPH:adrenodoxin oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fdxr PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"572.33197"	"1143.65666"	"1143.65710"	"-0.38"	"-0.00022"	"4/66"	"4"	"66"	"855216.040466309"	"HCD"	"MS2"	"53.85559"	"37.3"	"100.000"	"62.8744"	"20546"	"20546"	"20526"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.7"	""	"52.3"	""	"48.9"	""	"61.7"	"1.5"	"65.3"	"70.8"	""	"502"	"13"	"33.000"	"27.000"	"1.17943421259909"	"15"	"0.002973"	"0.02958"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVGVEQLR"	"[K].nVGVEQLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C089"	"Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ptpmt1 PE=1 SV=1"	"P0C089"	"Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ptpmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"572.33728"	"1143.66728"	"1143.66834"	"-0.92"	"-0.00053"	"4/70"	"4"	"70"	"1565676.31921387"	"HCD"	"MS2"	"37.3493"	"100.3"	"100.000"	"43.0042"	"12483"	"12483"	"12460"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"153.1"	""	"143.4"	""	"154.2"	""	"132.4"	""	"186.8"	"186.8"	""	"470"	"11"	"33.000"	"26.000"	"1.73807239638686"	"17"	"0.000936"	"0.0122"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVGVEQLR"	"[K].nVGVEQLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C089"	"Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ptpmt1 PE=1 SV=1"	"P0C089"	"Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ptpmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"572.33752"	"1143.66777"	"1143.66834"	"-0.49"	"-0.00028"	"5/70"	"5"	"70"	"1691045.76550293"	"HCD"	"MS2"	"33.04081"	"108.1"	"100.000"	"42.8820"	"12444"	"12444"	"12419"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"154.3"	""	"148.3"	""	"171.7"	""	"137.2"	""	"201.4"	"214.3"	""	"469"	"18"	"33.000"	"26.000"	"0.362362166071758"	"20"	"0.0006732"	"0.0089"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RNENLLR"	"[K].rNENLLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"1"	"3"	"3"	"0.4615"	"0.0000"	"1"	"1"	"1"	"381.89746"	"1143.67783"	"1143.67957"	"-1.52"	"-0.00058"	"6/60"	"6"	"60"	"8178392.28106689"	"HCD"	"MS2"	"10.51845"	"285.6"	"92.744"	"23.3881"	"4547"	"4547"	"4529"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"295.3"	""	"278.3"	""	"293.6"	""	"640.6"	""	"566.3"	"646.7"	""	"456"	"26"	"33.000"	"26.000"	"0.0551994622655848"	""	"0.006574"	"0.0738"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RNENLLR"	"[K].rNENLLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"1"	"3"	"3"	"0.4400"	"0.0000"	"1"	"1"	"1"	"381.89771"	"1143.67856"	"1143.67957"	"-0.88"	"-0.00034"	"6/60"	"6"	"60"	"7776895.72528076"	"HCD"	"MS2"	"8.854506"	"287.7"	"100.000"	"23.4456"	"4554"	"4554"	"4542"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"304.3"	""	"292.8"	""	"296.9"	""	"665.4"	""	"565.5"	"608.5"	""	"454"	"25"	"33.000"	"26.000"	"0.0687109348178996"	""	"0.006769"	"0.0785"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ILDLSSNLLR"	"[R].ILDLSSNLLR.[R]"	""	"1"	"1"	"Q80ZD5"	"Amphoterin-induced protein 3 OS=Rattus norvegicus OX=10116 GN=Amigo3 PE=1 SV=1"	"Q80ZD5"	"Amphoterin-induced protein 3 OS=Rattus norvegicus OX=10116 GN=Amigo3 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"572.34320"	"1143.67912"	"1143.67320"	"5.18"	"0.00296"	"5/84"	"5"	"84"	"2672573.57885742"	"HCD"	"MS2"	"39.1111"	"103.8"	"100.000"	"23.5374"	"4591"	"4591"	"4569"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"118.6"	""	"110.7"	""	"127.4"	""	"195.5"	"3.3"	"207.5"	"223.0"	"NoQuanLabels"	"453"	"18"	"33.000"	"26.000"	"0.371593583629696"	""	"0.009417"	"0.1231"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IALLEEAR"	"[K].iALLEEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.5349"	"0.0000"	"1"	"1"	"1"	"572.34979"	"1143.69231"	"1143.69349"	"-1.03"	"-0.00059"	"6/58"	"6"	"58"	"826465.465942383"	"HCD"	"MS2"	"5.671892"	"38.4"	"100.000"	"79.3842"	"27236"	"27236"	"27223"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.8"	""	"42.2"	""	"57.2"	""	"71.1"	""	"64.4"	"77.4"	""	"464"	"43"	"33.000"	"26.000"	"0.0012516646442351"	""	"0"	"0.001166"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IALLEEAR"	"[K].iALLEEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"572.35010"	"1143.69292"	"1143.69349"	"-0.50"	"-0.00029"	"6/58"	"6"	"58"	"673364.968994141"	"HCD"	"MS2"	"21.42319"	"30.0"	"100.000"	"79.6661"	"27349"	"27349"	"27338"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.3"	""	"42.3"	""	"36.6"	""	"53.5"	"0.8"	"52.9"	"57.6"	""	"461"	"32"	"33.000"	"26.000"	"0.0146781367569274"	""	"0.001211"	"0.01508"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IALLEEAR"	"[K].iALLEEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"572.35022"	"1143.69316"	"1143.69349"	"-0.29"	"-0.00016"	"6/58"	"6"	"58"	"776174.607971191"	"HCD"	"MS2"	"13.20877"	"38.6"	"100.000"	"79.3727"	"27227"	"27227"	"27210"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.5"	"2.2"	"51.8"	""	"55.5"	""	"60.7"	"2.6"	"67.1"	"71.3"	""	"515"	"44"	"34.000"	"27.000"	"0.0010858684963286"	""	"0"	"0.0009059"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IALLEEAR"	"[K].iALLEEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.4054"	"0.0000"	"1"	"1"	"3"	"572.35059"	"1143.69390"	"1143.69349"	"0.35"	"0.00020"	"5/58"	"5"	"58"	"684114.848449707"	"HCD"	"MS2"	"13.63382"	"31.6"	"100.000"	"79.6495"	"27338"	"27338"	"27328"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.3"	""	"36.5"	""	"49.7"	""	"58.1"	"1.2"	"58.1"	"54.4"	""	"515"	"37"	"34.000"	"27.000"	"0.00491787214080806"	""	"0.000936"	"0.01191"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQGQNLAR"	"[K].eQGQNLAR.[Q]"	"N-Term(TMT6plex)"	"1"	"2"	"P62836"	"Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"572.81683"	"1144.62639"	"1144.62720"	"-0.71"	"-0.00041"	"6/68"	"6"	"68"	"3383695.22814941"	"HCD"	"MS2"	"0"	"181.4"	"100.000"	"22.0342"	"3994"	"3994"	"3971"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"215.3"	""	"219.0"	""	"228.7"	""	"290.3"	""	"400.6"	"372.4"	""	"508"	"27"	"34.000"	"27.000"	"0.0512665056375117"	""	"0.001134"	"0.01396"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQGQNLAR"	"[K].eQGQNLAR.[Q]"	"N-Term(TMT6plex)"	"1"	"2"	"P62836"	"Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"572.81750"	"1144.62773"	"1144.62720"	"0.46"	"0.00027"	"6/68"	"6"	"68"	"3117660.80883789"	"HCD"	"MS2"	"0"	"174.4"	"100.000"	"22.0779"	"3995"	"3995"	"3969"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"219.8"	""	"194.1"	""	"226.6"	""	"285.4"	""	"379.2"	"353.6"	""	"499"	"29"	"33.000"	"26.000"	"0.0343613762489039"	""	"0.001374"	"0.01687"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDAEIAR"	"[K].lQDAEIAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.4250"	"0.0000"	"1"	"1"	"1"	"572.82947"	"1144.65166"	"1144.65235"	"-0.61"	"-0.00035"	"11/72"	"11"	"72"	"5424752.64282227"	"HCD"	"MS2"	"0.9128157"	"229.6"	"100.000"	"45.5395"	"13520"	"13520"	"13507"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"244.2"	""	"252.6"	""	"271.0"	""	"453.3"	"5.8"	"492.2"	"462.6"	""	"556"	"40"	"34.000"	"27.000"	"0.00278"	""	"0.0004639"	"0.007701"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDAEIAR"	"[K].lQDAEIAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"572.82959"	"1144.65190"	"1144.65235"	"-0.39"	"-0.00022"	"7/72"	"7"	"72"	"8538378.24066162"	"HCD"	"MS2"	"18.49779"	"353.7"	"100.000"	"45.0980"	"13329"	"13329"	"13307"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"400.8"	""	"349.9"	""	"403.6"	""	"758.2"	""	"743.1"	"710.2"	""	"563"	"39"	"34.000"	"27.000"	"0.00382365235214283"	""	"0.0003538"	"0.007092"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDAEIAR"	"[K].lQDAEIAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"572.82959"	"1144.65190"	"1144.65235"	"-0.39"	"-0.00022"	"7/72"	"7"	"72"	"8690350.22125244"	"HCD"	"MS2"	"19.70338"	"371.2"	"100.000"	"44.9552"	"13282"	"13282"	"13257"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"446.3"	""	"389.7"	""	"405.9"	""	"782.7"	""	"738.5"	"765.3"	""	"563"	"40"	"34.000"	"27.000"	"0.00262106866944194"	""	"0.0001301"	"0.004817"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDAEIAR"	"[K].lQDAEIAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"572.82971"	"1144.65215"	"1144.65235"	"-0.18"	"-0.00010"	"11/72"	"11"	"72"	"5136785.40545654"	"HCD"	"MS2"	"0"	"230.2"	"100.000"	"45.6892"	"13569"	"13569"	"13552"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"243.9"	""	"233.1"	""	"263.0"	""	"478.3"	"7.6"	"476.0"	"485.4"	""	"595"	"38"	"34.000"	"27.000"	"0.00445130107688094"	""	"0.0006732"	"0.008186"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDAEIAR"	"[K].lQDAEIAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"572.82996"	"1144.65264"	"1144.65235"	"0.25"	"0.00014"	"7/72"	"7"	"72"	"82723041.0024414"	"HCD"	"MS2"	"0"	"408.9"	"12.426"	"45.2473"	"13401"	"13401"	"13383"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"421.9"	""	"403.8"	""	"464.1"	""	"888.7"	""	"830.2"	"882.1"	""	"595"	"39"	"34.000"	"27.000"	"0.0034394339205215"	""	"0.0003538"	"0.006722"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDAEIAR"	"[K].lQDAEIAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.5897"	"0.0000"	"1"	"1"	"1"	"572.83038"	"1144.65349"	"1144.65235"	"0.99"	"0.00057"	"7/72"	"7"	"72"	"72056863.8847656"	"HCD"	"MS2"	"0"	"414.6"	"14.981"	"45.3973"	"13452"	"13452"	"13435"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"439.1"	""	"385.7"	""	"475.4"	""	"866.3"	""	"891.9"	"888.1"	""	"602"	"39"	"34.000"	"27.000"	"0.00345594240070562"	""	"0.0008629"	"0.0099"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDYYLDD"	"[K].lDYYLDD.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68G38"	"Torsin-1A OS=Rattus norvegicus OX=10116 GN=Tor1a PE=1 SV=1"	"Q68G38"	"Torsin-1A OS=Rattus norvegicus OX=10116 GN=Tor1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"573.28137"	"1145.55547"	"1145.55639"	"-0.80"	"-0.00046"	"4/60"	"4"	"60"	"193470.710632324"	"HCD"	"MS2"	"21.91832"	"5.0"	"100.000"	"101.8443"	"35625"	"35625"	"35620"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.4"	""	"8.9"	""	"7.8"	""	"6.9"	""	"8.0"	"9.4"	""	"295"	"9"	"31.000"	"24.000"	"1.83143715369881"	"13"	"0.009853"	"0.1278"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDYYLDD"	"[K].lDYYLDD.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68G38"	"Torsin-1A OS=Rattus norvegicus OX=10116 GN=Tor1a PE=1 SV=1"	"Q68G38"	"Torsin-1A OS=Rattus norvegicus OX=10116 GN=Tor1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"573.28174"	"1145.55620"	"1145.55639"	"-0.16"	"-0.00009"	"4/60"	"4"	"60"	"192033.908508301"	"HCD"	"MS2"	"21.24055"	"4.1"	"100.000"	"101.8880"	"35593"	"35593"	"35584"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.8"	""	"5.8"	""	"7.7"	""	"5.6"	""	"5.8"	"9.2"	""	"299"	"9"	"31.000"	"24.000"	"2.00281664770177"	"13"	"0.00912"	"0.1187"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLADVDLR"	"[K].dLADVDLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P81128"	"Rho GTPase-activating protein 35 OS=Rattus norvegicus OX=10116 GN=Arhgap35 PE=1 SV=3"	"P81128"	"Rho GTPase-activating protein 35 OS=Rattus norvegicus OX=10116 GN=Arhgap35 PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"573.32001"	"1145.63274"	"1145.63637"	"-3.17"	"-0.00182"	"6/66"	"6"	"66"	"848388.165283203"	"HCD"	"MS2"	"10.7607"	"38.0"	"100.000"	"65.3739"	"21542"	"21542"	"21517"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.0"	""	"37.3"	""	"45.6"	""	"65.8"	""	"77.0"	"87.3"	""	"680"	"27"	"35.000"	"28.000"	"0.075941455576238"	""	"0.004942"	"0.05604"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGQASEVAR"	"[K].vGQASEVAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"O08837"	"Cell division cycle 5-like protein OS=Rattus norvegicus OX=10116 GN=Cdc5l PE=1 SV=2"	"O08837"	"Cell division cycle 5-like protein OS=Rattus norvegicus OX=10116 GN=Cdc5l PE=1 SV=2"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"573.32648"	"1145.64568"	"1145.64760"	"-1.68"	"-0.00096"	"8/78"	"8"	"78"	"1997710.09191895"	"HCD"	"MS2"	"0"	"97.1"	"100.000"	"28.0768"	"6437"	"6437"	"6418"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"106.7"	""	"105.1"	""	"97.4"	""	"190.4"	""	"216.0"	"207.9"	""	"743"	"28"	"35.000"	"28.000"	"0.0632351885868724"	""	"0"	"0.002847"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGQASEVAR"	"[K].vGQASEVAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"O08837"	"Cell division cycle 5-like protein OS=Rattus norvegicus OX=10116 GN=Cdc5l PE=1 SV=2"	"O08837"	"Cell division cycle 5-like protein OS=Rattus norvegicus OX=10116 GN=Cdc5l PE=1 SV=2"	"0"	"2"	"2"	"0.2917"	"0.0000"	"1"	"1"	"1"	"573.32654"	"1145.64580"	"1145.64760"	"-1.57"	"-0.00090"	"8/78"	"8"	"78"	"1558785.24450684"	"HCD"	"MS2"	"0"	"76.1"	"100.000"	"28.0772"	"6423"	"6423"	"6405"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.3"	""	"73.2"	""	"72.5"	""	"149.3"	""	"167.8"	"176.0"	""	"743"	"24"	"35.000"	"28.000"	"0.164043421191756"	""	"0.00447"	"0.04711"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLAENISR"	"[R].nLAENISR.[V]"	"N-Term(TMT6plex)"	"3"	"3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5;Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5; Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"573.32709"	"1145.64690"	"1145.64760"	"-0.61"	"-0.00035"	"6/76"	"6"	"76"	"2465505.73187256"	"HCD"	"MS2"	"3.830467"	"132.0"	"100.000"	"39.2965"	"10983"	"10983"	"10962"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"220.9"	""	"161.9"	""	"182.3"	""	"193.6"	"1.2"	"212.0"	"277.5"	""	"731"	"39"	"35.000"	"28.000"	"0.00424509468358645"	""	"0.0002479"	"0.005948"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLAENISR"	"[R].nLAENISR.[V]"	"N-Term(TMT6plex)"	"3"	"3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5;Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5; Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.5366"	"0.0000"	"1"	"1"	"1"	"573.32721"	"1145.64714"	"1145.64760"	"-0.40"	"-0.00023"	"6/76"	"6"	"76"	"9580504.62585449"	"HCD"	"MS2"	"0"	"425.4"	"100.000"	"39.1567"	"10917"	"10917"	"10899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"719.4"	"3.9"	"549.7"	""	"564.9"	""	"589.8"	"1.3"	"624.0"	"973.5"	""	"738"	"41"	"35.000"	"28.000"	"0.0029310711861326"	""	"0.0002479"	"0.005926"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLAENISR"	"[R].nLAENISR.[V]"	"N-Term(TMT6plex)"	"3"	"3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5;Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5; Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.4146"	"0.0000"	"1"	"1"	"1"	"573.32727"	"1145.64726"	"1145.64760"	"-0.29"	"-0.00017"	"6/76"	"6"	"76"	"10788407.3001709"	"HCD"	"MS2"	"0"	"434.1"	"100.000"	"38.9972"	"10861"	"10861"	"10844"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"717.4"	""	"552.1"	""	"562.4"	""	"593.3"	"7.3"	"665.3"	"1012.9"	""	"743"	"41"	"35.000"	"28.000"	"0.0029509293920007"	""	"0.0001301"	"0.004249"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLAENISR"	"[R].nLAENISR.[V]"	"N-Term(TMT6plex)"	"3"	"3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5;Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5; Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"573.32739"	"1145.64751"	"1145.64760"	"-0.08"	"-0.00005"	"6/76"	"6"	"76"	"3083679.80163574"	"HCD"	"MS2"	"8.270899"	"160.9"	"100.000"	"39.4627"	"11041"	"11041"	"11025"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"262.5"	""	"190.3"	""	"226.5"	""	"233.2"	""	"254.5"	"356.6"	""	"745"	"40"	"35.000"	"28.000"	"0.00386479334892209"	""	"0.0002479"	"0.005167"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"573.32874"	"1145.65019"	"1145.65163"	"-1.25"	"-0.00072"	"5/76"	"5"	"76"	"3932773.88360596"	"HCD"	"MS2"	"36.79372"	"146.3"	"100.000"	"68.3488"	"22769"	"22769"	"22751"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"210.0"	""	"179.3"	""	"201.1"	""	"236.8"	""	"290.4"	"269.7"	""	"873"	"28"	"36.000"	"29.000"	"0.0683886842102207"	"25"	"0.005183"	"0.05869"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.3448"	"0.0000"	"1"	"1"	"1"	"573.32886"	"1145.65044"	"1145.65163"	"-1.04"	"-0.00059"	"5/76"	"5"	"76"	"387898.407409668"	"HCD"	"MS2"	"45.61517"	"21.8"	"100.000"	"65.4828"	"21602"	"21602"	"21577"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.3"	""	"29.2"	""	"29.2"	""	"33.3"	""	"40.1"	"46.6"	""	"871"	"29"	"36.000"	"29.000"	"0.0588827601271107"	""	"0.003967"	"0.042"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.4722"	"0.0000"	"1"	"1"	"1"	"573.32886"	"1145.65044"	"1145.65163"	"-1.04"	"-0.00059"	"5/76"	"5"	"76"	"3833743.81793213"	"HCD"	"MS2"	"11.25592"	"123.5"	"100.000"	"68.2050"	"22696"	"22696"	"22678"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"132.2"	""	"148.6"	""	"155.1"	""	"220.2"	""	"278.3"	"239.2"	""	"871"	"36"	"36.000"	"29.000"	"0.0114812231852695"	""	"0.000936"	"0.01156"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6458"	"0.0000"	"1"	"1"	"1"	"573.32892"	"1145.65056"	"1145.65163"	"-0.93"	"-0.00053"	"6/76"	"6"	"76"	"1863305.98809814"	"HCD"	"MS2"	"3.466352"	"67.3"	"100.000"	"63.8759"	"20938"	"20938"	"20919"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.3"	""	"69.8"	""	"88.8"	""	"125.0"	""	"142.9"	"142.4"	""	"871"	"48"	"36.000"	"29.000"	"0.000687049707954066"	""	"0.001134"	"0.01401"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6122"	"0.0000"	"1"	"1"	"1"	"573.32898"	"1145.65068"	"1145.65163"	"-0.82"	"-0.00047"	"7/76"	"7"	"76"	"562029.606445313"	"HCD"	"MS2"	"4.881214"	"26.8"	"100.000"	"64.5428"	"21224"	"21224"	"21199"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.9"	""	"33.7"	""	"28.9"	""	"54.1"	""	"59.6"	"53.9"	""	"871"	"49"	"36.000"	"29.000"	"0.000601157347234556"	""	"0.000936"	"0.01227"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6889"	"0.0000"	"1"	"1"	"1"	"573.32898"	"1145.65068"	"1145.65163"	"-0.82"	"-0.00047"	"6/76"	"6"	"76"	"1951806.44439697"	"HCD"	"MS2"	"1.564461"	"72.3"	"100.000"	"63.7501"	"20902"	"20902"	"20885"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"73.9"	""	"76.5"	""	"91.9"	""	"137.6"	""	"154.2"	"154.0"	""	"871"	"45"	"36.000"	"29.000"	"0.00139633029082213"	""	"0.001635"	"0.01975"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"573.32898"	"1145.65068"	"1145.65163"	"-0.82"	"-0.00047"	"6/76"	"6"	"76"	"11619486.1380005"	"HCD"	"MS2"	"0"	"244.6"	"74.077"	"63.4506"	"20780"	"20780"	"20763"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"257.6"	""	"258.7"	""	"304.5"	""	"460.6"	""	"545.5"	"504.2"	""	"871"	"48"	"36.000"	"29.000"	"0.000629489020159851"	""	"0.0003538"	"0.006964"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"573.32904"	"1145.65080"	"1145.65163"	"-0.72"	"-0.00041"	"6/76"	"6"	"76"	"2362152.44995117"	"HCD"	"MS2"	"6.143504"	"83.8"	"100.000"	"63.1396"	"20653"	"20653"	"20634"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.1"	""	"92.7"	""	"103.0"	""	"170.0"	"1.4"	"165.3"	"157.4"	""	"871"	"48"	"36.000"	"29.000"	"0.000706298297399814"	""	"0.0008629"	"0.01108"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.4773"	"0.0000"	"1"	"1"	"1"	"573.32928"	"1145.65129"	"1145.65163"	"-0.29"	"-0.00017"	"7/76"	"7"	"76"	"499338.08001709"	"HCD"	"MS2"	"19.47473"	"24.2"	"100.000"	"64.8758"	"21356"	"21356"	"21326"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.4"	""	"31.7"	""	"31.0"	""	"48.8"	""	"51.6"	"43.3"	""	"875"	"44"	"36.000"	"29.000"	"0.00184067899918194"	""	"0.001211"	"0.01409"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"573.32928"	"1145.65129"	"1145.65163"	"-0.29"	"-0.00017"	"6/76"	"6"	"76"	"11036613.3964233"	"HCD"	"MS2"	"0"	"255.9"	"84.603"	"63.5650"	"20812"	"20812"	"20795"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"274.6"	""	"256.9"	""	"316.5"	""	"491.0"	"2.8"	"577.5"	"513.8"	""	"875"	"45"	"36.000"	"29.000"	"0.00127343873915414"	""	"0.0006732"	"0.008933"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"573.32935"	"1145.65141"	"1145.65163"	"-0.18"	"-0.00011"	"6/76"	"6"	"76"	"949172.908325195"	"HCD"	"MS2"	"8.867919"	"40.5"	"100.000"	"64.0517"	"21024"	"21024"	"21002"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.7"	""	"47.9"	""	"59.2"	""	"67.0"	""	"78.1"	"84.8"	""	"875"	"40"	"36.000"	"29.000"	"0.00444608803130929"	""	"0.001374"	"0.01609"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6809"	"0.0000"	"1"	"1"	"1"	"573.32941"	"1145.65154"	"1145.65163"	"-0.08"	"-0.00004"	"6/76"	"6"	"76"	"935531.466674805"	"HCD"	"MS2"	"8.1777"	"39.0"	"100.000"	"64.1776"	"21061"	"21061"	"21043"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.3"	""	"44.4"	""	"44.0"	""	"76.2"	""	"85.1"	"82.0"	""	"873"	"47"	"36.000"	"29.000"	"0.00088508350707104"	""	"0.0008629"	"0.01073"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"573.32941"	"1145.65154"	"1145.65163"	"-0.08"	"-0.00004"	"6/76"	"6"	"76"	"2665888.75744629"	"HCD"	"MS2"	"8.38928"	"93.1"	"100.000"	"63.2721"	"20692"	"20692"	"20673"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.4"	""	"97.4"	""	"105.3"	""	"200.4"	"1.2"	"205.6"	"171.5"	""	"873"	"48"	"36.000"	"29.000"	"0.000690214769141522"	""	"0.0006732"	"0.008382"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6531"	"0.0000"	"1"	"1"	"1"	"573.32965"	"1145.65203"	"1145.65163"	"0.35"	"0.00020"	"7/76"	"7"	"76"	"505551.31048584"	"HCD"	"MS2"	"9.084865"	"25.8"	"100.000"	"64.7284"	"21281"	"21281"	"21255"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.3"	""	"30.0"	""	"26.1"	""	"48.7"	""	"53.7"	"57.7"	""	"874"	"49"	"36.000"	"29.000"	"0.000613029588893576"	""	"0.000936"	"0.01289"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.2759"	"0.0000"	"1"	"1"	"1"	"573.33002"	"1145.65276"	"1145.65163"	"0.99"	"0.00057"	"5/76"	"5"	"76"	"317928.778747559"	"HCD"	"MS2"	"45.52668"	"20.2"	"100.000"	"71.4207"	"24022"	"24022"	"23994"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.4"	""	"28.9"	""	"27.1"	""	"37.0"	"0.9"	"40.5"	"33.9"	""	"869"	"29"	"36.000"	"29.000"	"0.0508147485398134"	""	"0.008437"	"0.1002"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"573.33112"	"1145.65495"	"1145.65163"	"2.91"	"0.00166"	"5/76"	"5"	"76"	"436848.9296875"	"HCD"	"MS2"	"17.23728"	"24.1"	"100.000"	"65.6573"	"21658"	"21658"	"21629"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.8"	""	"28.4"	""	"29.1"	""	"34.6"	"1.0"	"47.7"	"47.7"	""	"868"	"31"	"36.000"	"29.000"	"0.0344738453870338"	"26"	"0.004942"	"0.05277"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLTLDER"	"[K].aVLTLDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"573.33942"	"1145.67156"	"1145.67275"	"-1.05"	"-0.00060"	"12/62"	"12"	"62"	"6256933.32684326"	"HCD"	"MS2"	"4.802719"	"222.1"	"100.000"	"58.8276"	"18921"	"18921"	"18904"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"332.0"	""	"322.6"	""	"336.5"	""	"358.0"	""	"366.8"	"386.4"	""	"818"	"49"	"36.000"	"29.000"	"0.000549190869105386"	""	"0"	"0.003016"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLTLDER"	"[K].aVLTLDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"573.33954"	"1145.67180"	"1145.67275"	"-0.83"	"-0.00048"	"6/62"	"6"	"62"	"3044869.30456543"	"HCD"	"MS2"	"40.16214"	"120.4"	"100.000"	"58.2288"	"18676"	"18676"	"18655"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"192.1"	""	"178.9"	""	"164.6"	""	"195.5"	""	"195.0"	"215.7"	""	"818"	"40"	"36.000"	"29.000"	"0.00396025643210851"	""	"0"	"0.003637"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVEEAVR"	"[K].lTVEEAVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"573.33954"	"1145.67180"	"1145.67275"	"-0.83"	"-0.00048"	"11/62"	"11"	"62"	"5445823.46081543"	"HCD"	"MS2"	"24.51353"	"198.5"	"100.000"	"53.1162"	"16608"	"16608"	"16593"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"228.0"	""	"267.3"	""	"279.7"	""	"190.0"	"2.9"	"593.9"	"329.0"	""	"818"	"40"	"36.000"	"29.000"	"0.00390591967682767"	"27"	"0.0002479"	"0.005553"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLTLDER"	"[K].aVLTLDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"573.33954"	"1145.67180"	"1145.67275"	"-0.83"	"-0.00048"	"11/62"	"11"	"62"	"5154722.05651855"	"HCD"	"MS2"	"6.036851"	"184.4"	"100.000"	"58.6551"	"18865"	"18865"	"18847"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"280.2"	""	"255.8"	""	"266.7"	""	"300.6"	""	"314.7"	"329.6"	""	"818"	"43"	"36.000"	"29.000"	"0.0019396497197144"	"29"	"0"	"0.003448"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVEEAVR"	"[K].lTVEEAVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"573.33966"	"1145.67204"	"1145.67275"	"-0.62"	"-0.00035"	"11/62"	"11"	"62"	"2498871.12097168"	"HCD"	"MS2"	"39.90069"	"108.4"	"100.000"	"53.0828"	"16583"	"16583"	"16563"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"151.6"	""	"176.2"	""	"151.8"	""	"114.5"	""	"231.4"	"203.2"	""	"818"	"43"	"36.000"	"29.000"	"0.00218133972254437"	"27"	"0.0001301"	"0.004135"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVEEAVR"	"[K].lTVEEAVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"573.33966"	"1145.67204"	"1145.67275"	"-0.62"	"-0.00035"	"7/62"	"7"	"62"	"4868969.81506348"	"HCD"	"MS2"	"23.42859"	"186.0"	"100.000"	"53.3841"	"16707"	"16707"	"16690"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"208.8"	""	"256.5"	""	"271.6"	""	"201.0"	""	"523.4"	"320.3"	""	"818"	"25"	"36.000"	"29.000"	"0.126684449337958"	"22"	"0.001211"	"0.01476"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLTLDER"	"[K].aVLTLDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"573.33978"	"1145.67229"	"1145.67275"	"-0.41"	"-0.00023"	"5/62"	"5"	"62"	"931651.389953613"	"HCD"	"MS2"	"15.48634"	"45.2"	"100.000"	"59.1501"	"19052"	"19052"	"19032"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"64.9"	""	"63.4"	""	"58.2"	""	"72.1"	"0.4"	"79.2"	"90.0"	""	"818"	"35"	"36.000"	"29.000"	"0.0123800759209343"	"27"	"0.0003538"	"0.007041"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLTLDER"	"[K].aVLTLDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"573.33978"	"1145.67229"	"1145.67275"	"-0.41"	"-0.00023"	"6/62"	"6"	"62"	"3247089.98345947"	"HCD"	"MS2"	"39.67023"	"130.3"	"100.000"	"58.0380"	"18613"	"18613"	"18591"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"213.1"	""	"192.8"	""	"178.8"	""	"210.4"	""	"208.3"	"230.4"	""	"818"	"40"	"36.000"	"29.000"	"0.00387903151490067"	""	"0"	"0.001961"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLTLDER"	"[K].aVLTLDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"573.33978"	"1145.67229"	"1145.67275"	"-0.41"	"-0.00023"	"11/62"	"11"	"62"	"55000644.722168"	"HCD"	"MS2"	"0.07648398"	"361.8"	"18.922"	"58.5214"	"18796"	"18796"	"18783"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"584.7"	""	"514.2"	""	"510.2"	""	"592.8"	""	"598.4"	"624.4"	""	"818"	"43"	"36.000"	"29.000"	"0.0018609011660137"	"29"	"0"	"0.003373"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVEEAVR"	"[K].lTVEEAVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"573.33984"	"1145.67241"	"1145.67275"	"-0.30"	"-0.00017"	"10/62"	"10"	"62"	"2576042.01971436"	"HCD"	"MS2"	"46.55153"	"113.9"	"100.000"	"52.8170"	"16486"	"16486"	"16465"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"162.1"	""	"175.1"	""	"188.8"	""	"129.3"	""	"208.9"	"215.4"	""	"899"	"35"	"36.000"	"29.000"	"0.0127564460328448"	"26"	"0.0001301"	"0.003845"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEESVALR"	"[R].lEESVALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"573.33990"	"1145.67253"	"1145.67275"	"-0.19"	"-0.00011"	"6/60"	"6"	"60"	"3851565.96850586"	"HCD"	"MS2"	"8.701334"	"158.4"	"100.000"	"57.6463"	"18454"	"18454"	"18437"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"208.0"	""	"207.5"	""	"234.7"	""	"247.8"	"0.3"	"299.3"	"303.6"	""	"899"	"35"	"36.000"	"29.000"	"0.0131440649384058"	"29"	"0.0002479"	"0.005132"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEESVALR"	"[R].lEESVALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"573.34003"	"1145.67278"	"1145.67275"	"0.02"	"0.00001"	"6/60"	"6"	"60"	"3927202.28503418"	"HCD"	"MS2"	"9.294741"	"162.0"	"100.000"	"57.8326"	"18515"	"18515"	"18498"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"231.0"	""	"218.5"	""	"235.2"	""	"262.8"	""	"277.2"	"313.1"	""	"898"	"35"	"36.000"	"29.000"	"0.012979152671821"	"29"	"0.0003538"	"0.006774"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEESVALR"	"[R].lEESVALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"0.4595"	"0.0000"	"1"	"1"	"1"	"573.34021"	"1145.67314"	"1145.67275"	"0.34"	"0.00019"	"6/60"	"6"	"60"	"2453968.20330811"	"HCD"	"MS2"	"5.457695"	"113.4"	"100.000"	"57.5446"	"18397"	"18397"	"18380"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"161.1"	""	"154.1"	""	"161.2"	""	"182.2"	"1.3"	"201.8"	"212.6"	""	"892"	"37"	"36.000"	"29.000"	"0.00873644724383672"	""	"0.0001301"	"0.004735"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLTLDER"	"[K].aVLTLDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"573.34052"	"1145.67375"	"1145.67275"	"0.87"	"0.00050"	"5/62"	"5"	"62"	"888928.323486328"	"HCD"	"MS2"	"12.13668"	"46.3"	"100.000"	"58.9822"	"18999"	"18999"	"18975"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.3"	""	"64.8"	""	"65.5"	""	"77.4"	""	"81.2"	"80.0"	""	"892"	"33"	"36.000"	"29.000"	"0.0246794148710218"	"26"	"0.001211"	"0.0145"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEESVALR"	"[R].lEESVALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"573.34052"	"1145.67375"	"1145.67275"	"0.87"	"0.00050"	"6/60"	"6"	"60"	"2535545.52453613"	"HCD"	"MS2"	"8.306136"	"116.6"	"100.000"	"57.3561"	"18335"	"18335"	"18313"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"164.5"	""	"161.6"	""	"171.3"	""	"184.7"	"0.8"	"210.0"	"211.4"	""	"892"	"39"	"36.000"	"29.000"	"0.00586590275157738"	""	"0.0001301"	"0.004195"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLTLDER"	"[K].aVLTLDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"573.34058"	"1145.67388"	"1145.67275"	"0.98"	"0.00056"	"11/62"	"11"	"62"	"47818872.3806152"	"HCD"	"MS2"	"0"	"483.8"	"28.912"	"58.3375"	"18736"	"18736"	"18719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"735.3"	""	"713.5"	""	"665.2"	""	"822.3"	"3.5"	"815.1"	"822.7"	""	"892"	"43"	"36.000"	"29.000"	"0.00200601815282406"	"29"	"0.0003538"	"0.006671"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPSAVAK"	"[K].dPSAVAk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"573.34985"	"1145.69243"	"1145.69304"	"-0.54"	"-0.00031"	"6/52"	"6"	"52"	"5641439.51855469"	"HCD"	"MS2"	"19.34104"	"321.9"	"100.000"	"36.1510"	"9707"	"9707"	"9691"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"519.5"	""	"413.6"	""	"381.8"	""	"540.3"	"0.5"	"562.2"	"630.9"	""	"741"	"28"	"35.000"	"28.000"	"0.0609239723451132"	""	"0.005119"	"0.05849"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPSAVAK"	"[K].dPSAVAk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"573.35016"	"1145.69304"	"1145.69304"	"0.00"	"0.00000"	"6/52"	"6"	"52"	"4764605.33465576"	"HCD"	"MS2"	"12.22068"	"298.8"	"100.000"	"36.3175"	"9768"	"9768"	"9754"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"485.1"	""	"381.8"	""	"357.9"	""	"499.9"	"8.1"	"532.4"	"565.2"	""	"729"	"29"	"35.000"	"28.000"	"0.0477196810933284"	"28"	"0.004542"	"0.04913"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPSAVAK"	"[K].dPSAVAk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"573.35022"	"1145.69316"	"1145.69304"	"0.10"	"0.00006"	"6/52"	"6"	"52"	"4919054.61022949"	"HCD"	"MS2"	"0"	"303.9"	"100.000"	"36.4520"	"9829"	"9829"	"9810"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"451.4"	""	"350.5"	""	"375.7"	""	"492.7"	"1.7"	"581.2"	"629.2"	""	"727"	"30"	"35.000"	"28.000"	"0.0325465092277277"	""	"0.003967"	"0.04137"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPSAVAK"	"[K].dPSAVAk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"573.35028"	"1145.69328"	"1145.69304"	"0.21"	"0.00012"	"10/52"	"10"	"52"	"5065853.34375"	"HCD"	"MS2"	"0"	"313.7"	"100.000"	"36.6323"	"9897"	"9897"	"9880"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"512.2"	""	"355.8"	""	"371.5"	""	"512.5"	""	"562.1"	"659.7"	""	"727"	"34"	"35.000"	"28.000"	"0.0149452923621494"	""	"0.003449"	"0.03441"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADMLSGPR"	"[K].aADMLSGPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"573.81061"	"1146.61394"	"1146.61386"	"0.07"	"0.00004"	"7/70"	"7"	"70"	"3726223.24365234"	"HCD"	"MS2"	"39.89589"	"194.3"	"100.000"	"46.2717"	"13819"	"13819"	"13801"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"326.5"	""	"282.5"	""	"315.6"	""	"214.6"	"0.2"	"340.7"	"358.0"	""	"775"	"31"	"35.000"	"28.000"	"0.0288583639888571"	"26"	"0"	"0.001421"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADMLSGPR"	"[K].aADMLSGPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"573.81073"	"1146.61418"	"1146.61386"	"0.28"	"0.00016"	"7/70"	"7"	"70"	"3380042.14263916"	"HCD"	"MS2"	"43.29694"	"178.1"	"100.000"	"46.4349"	"13874"	"13874"	"13852"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"317.9"	""	"272.4"	""	"275.8"	""	"212.4"	"0.7"	"283.0"	"321.5"	""	"775"	"29"	"35.000"	"28.000"	"0.0440830573256579"	"21"	"0"	"0.001754"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDSLAQR"	"[R].dIDSLAQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"573.81952"	"1146.63176"	"1146.63162"	"0.13"	"0.00007"	"6/64"	"6"	"64"	"3697464.56066895"	"HCD"	"MS2"	"32.36031"	"164.0"	"100.000"	"47.2824"	"14230"	"14230"	"14206"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"222.2"	""	"174.1"	""	"192.2"	""	"308.6"	""	"334.8"	"326.4"	""	"850"	"27"	"36.000"	"29.000"	"0.0857805704564664"	"26"	"0.0005778"	"0.008086"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLEGLSQR"	"[K].dLEGLSQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.0455"	"0.0000"	"1"	"1"	"1"	"573.81970"	"1146.63213"	"1146.63162"	"0.44"	"0.00026"	"6/68"	"6"	"68"	"4021104.09655762"	"HCD"	"MS2"	"14.73349"	"216.6"	"100.000"	"45.6179"	"13552"	"13552"	"13534"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"266.4"	""	"246.3"	""	"271.2"	""	"419.6"	""	"435.8"	"418.8"	""	"850"	"22"	"36.000"	"29.000"	"0.282090804920812"	""	"0.006443"	"0.07287"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDSLAQR"	"[R].dIDSLAQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"573.81976"	"1146.63225"	"1146.63162"	"0.55"	"0.00032"	"6/64"	"6"	"64"	"3280744.08056641"	"HCD"	"MS2"	"33.90424"	"147.5"	"100.000"	"47.5511"	"14328"	"14328"	"14305"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"221.7"	""	"160.2"	""	"179.4"	""	"276.7"	""	"277.2"	"285.0"	""	"865"	"26"	"36.000"	"29.000"	"0.11939499228153"	"26"	"0.000936"	"0.0122"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEDSLAR"	"[R].dLEDSLAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.3056"	"0.0000"	"1"	"1"	"1"	"574.31067"	"1147.61406"	"1147.61563"	"-1.37"	"-0.00079"	"6/64"	"6"	"64"	"1997743.46575928"	"HCD"	"MS2"	"29.27378"	"108.6"	"100.000"	"50.8288"	"15675"	"15675"	"15651"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"98.7"	""	"95.5"	""	"88.0"	""	"195.4"	""	"276.4"	"284.5"	""	"840"	"36"	"36.000"	"29.000"	"0.0105742430965872"	""	"0"	"0.003558"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEDSLAR"	"[R].dLEDSLAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.1622"	"0.0000"	"1"	"1"	"1"	"574.31104"	"1147.61479"	"1147.61563"	"-0.73"	"-0.00042"	"6/64"	"6"	"64"	"2331035.3414917"	"HCD"	"MS2"	"29.56872"	"121.9"	"100.000"	"51.1792"	"15807"	"15807"	"15778"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"97.7"	""	"108.9"	""	"87.6"	""	"223.0"	"0.9"	"309.2"	"336.6"	""	"838"	"37"	"36.000"	"29.000"	"0.00841809888483058"	""	"0"	"0.003599"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEDSLAR"	"[R].dLEDSLAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.3462"	"0.0000"	"1"	"1"	"1"	"574.31146"	"1147.61565"	"1147.61563"	"0.01"	"0.00001"	"9/64"	"9"	"64"	"3690704.85388184"	"HCD"	"MS2"	"42.43326"	"222.9"	"100.000"	"51.1444"	"15803"	"15803"	"15783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"247.1"	""	"261.9"	""	"247.9"	""	"441.4"	""	"452.0"	"473.4"	""	"861"	"26"	"36.000"	"29.000"	"0.111679421539215"	""	"0.001812"	"0.02076"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGTLVSGGGR"	"[R].dGTLVSGGGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"574.31659"	"1147.62590"	"1147.62687"	"-0.84"	"-0.00048"	"8/82"	"8"	"82"	"6708903.99407959"	"HCD"	"MS2"	"18.61083"	"287.9"	"100.000"	"29.9578"	"7188"	"7188"	"7165"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"470.6"	""	"353.0"	""	"397.2"	""	"457.6"	""	"504.5"	"543.0"	""	"836"	"39"	"36.000"	"29.000"	"0.00496793931068673"	"22"	"0"	"9.078E-05"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGTLVSGGGR"	"[R].dGTLVSGGGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"574.31665"	"1147.62602"	"1147.62687"	"-0.73"	"-0.00042"	"8/82"	"8"	"82"	"6432701.41925049"	"HCD"	"MS2"	"27.11684"	"278.7"	"100.000"	"29.9000"	"7176"	"7176"	"7155"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"452.1"	""	"319.1"	""	"366.7"	""	"471.1"	""	"519.5"	"514.8"	""	"836"	"40"	"36.000"	"29.000"	"0.00430701398344595"	"21"	"0"	"0.000122"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDVPGVR"	"[R].fEDVPGVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P23347"	"Anion exchange protein 2 OS=Rattus norvegicus OX=10116 GN=Slc4a2 PE=1 SV=1"	"P23347"	"Anion exchange protein 2 OS=Rattus norvegicus OX=10116 GN=Slc4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"574.31818"	"1147.62908"	"1147.63089"	"-1.58"	"-0.00091"	"9/58"	"9"	"58"	"1088556.28106689"	"HCD"	"MS2"	"30.23829"	"55.9"	"100.000"	"62.3335"	"20310"	"20310"	"20293"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.6"	""	"54.8"	""	"57.8"	""	"114.0"	""	"114.1"	"139.8"	""	"870"	"31"	"36.000"	"29.000"	"0.0324705209908379"	"22"	"0.0003538"	"0.007119"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDVPGVR"	"[R].fEDVPGVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P23347"	"Anion exchange protein 2 OS=Rattus norvegicus OX=10116 GN=Slc4a2 PE=1 SV=1"	"P23347"	"Anion exchange protein 2 OS=Rattus norvegicus OX=10116 GN=Slc4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"574.31854"	"1147.62981"	"1147.63089"	"-0.94"	"-0.00054"	"6/58"	"6"	"58"	"788038.18927002"	"HCD"	"MS2"	"13.2937"	"41.1"	"100.000"	"62.2673"	"20299"	"20299"	"20285"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.6"	""	"34.4"	""	"43.8"	""	"82.2"	"1.9"	"89.9"	"97.6"	""	"849"	"28"	"36.000"	"29.000"	"0.071594175927752"	"22"	"0.001546"	"0.01893"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVTVAK"	"[K].dGVTVAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.2609"	"0.0000"	"1"	"1"	"1"	"574.35797"	"1147.70867"	"1147.70869"	"-0.03"	"-0.00001"	"5/54"	"5"	"54"	"8198883.55187988"	"HCD"	"MS2"	"26.27222"	"597.1"	"100.000"	"40.1332"	"11324"	"11324"	"11310"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"913.4"	""	"745.4"	""	"816.2"	""	"1118.5"	""	"1032.0"	"1026.1"	""	"355"	"23"	"32.000"	"25.000"	"0.0912427481558806"	""	"0.00447"	"0.04866"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMVDPNSR"	"[R].tMVDPNSR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"574.80011"	"1148.59294"	"1148.59312"	"-0.16"	"-0.00009"	"6/72"	"6"	"72"	"8914480.30535889"	"HCD"	"MS2"	"0"	"368.6"	"100.000"	"30.5703"	"7437"	"7437"	"7418"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"569.1"	"3.0"	"485.7"	""	"524.1"	""	"407.5"	""	"701.4"	"807.5"	""	"587"	"36"	"34.000"	"27.000"	"0.00732163552357757"	""	"0.001211"	"0.01556"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFSQHAR"	"[R].sSFSQHAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"574.80365"	"1148.60002"	"1148.60099"	"-0.84"	"-0.00048"	"6/68"	"6"	"68"	"1375397.79370117"	"HCD"	"MS2"	"0"	"79.8"	"100.000"	"20.0370"	"3188"	"3188"	"3174"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"94.5"	""	"75.4"	""	"81.2"	""	"138.5"	""	"181.1"	"190.5"	""	"584"	"7"	"34.000"	"27.000"	"5.30130573529756"	"19"	"0.008668"	"0.1111"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSAWATR"	"[R].eVSAWATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P37199"	"Nuclear pore complex protein Nup155 OS=Rattus norvegicus OX=10116 GN=Nup155 PE=1 SV=1"	"P37199"	"Nuclear pore complex protein Nup155 OS=Rattus norvegicus OX=10116 GN=Nup155 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"574.81531"	"1148.62334"	"1148.62614"	"-2.44"	"-0.00140"	"6/68"	"6"	"68"	"1034643.1361084"	"HCD"	"MS2"	"57.81342"	"72.6"	"100.000"	"46.6155"	"13958"	"13958"	"13942"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.4"	""	"87.0"	""	"96.7"	""	"115.5"	""	"149.0"	"150.7"	""	"607"	"14"	"34.000"	"27.000"	"1.2110405786691"	"19"	"0.00736"	"0.08586"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSAWATR"	"[R].eVSAWATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P37199"	"Nuclear pore complex protein Nup155 OS=Rattus norvegicus OX=10116 GN=Nup155 PE=1 SV=1"	"P37199"	"Nuclear pore complex protein Nup155 OS=Rattus norvegicus OX=10116 GN=Nup155 PE=1 SV=1"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"574.81537"	"1148.62346"	"1148.62614"	"-2.33"	"-0.00134"	"6/68"	"6"	"68"	"1037528.97558594"	"HCD"	"MS2"	"33.52917"	"75.9"	"100.000"	"46.5720"	"13941"	"13941"	"13923"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"97.4"	""	"85.8"	""	"106.5"	""	"129.1"	""	"144.9"	"161.6"	""	"607"	"21"	"34.000"	"27.000"	"0.229170491096459"	"24"	"0.006505"	"0.07325"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSAWATR"	"[R].eVSAWATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P37199"	"Nuclear pore complex protein Nup155 OS=Rattus norvegicus OX=10116 GN=Nup155 PE=1 SV=1"	"P37199"	"Nuclear pore complex protein Nup155 OS=Rattus norvegicus OX=10116 GN=Nup155 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"574.81549"	"1148.62370"	"1148.62614"	"-2.12"	"-0.00122"	"6/68"	"6"	"68"	"1037168.56860352"	"HCD"	"MS2"	"27.61691"	"72.9"	"100.000"	"46.7236"	"13991"	"13991"	"13974"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"97.8"	""	"86.5"	""	"87.3"	""	"119.2"	"1.3"	"144.3"	"155.4"	""	"603"	"24"	"34.000"	"27.000"	"0.109468033513186"	"25"	"0.005183"	"0.05898"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTTVTGLGR"	"[K].dTTVTGLGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"574.82880"	"1148.65032"	"1148.64727"	"2.65"	"0.00152"	"8/72"	"8"	"72"	"10316364.6459961"	"HCD"	"MS2"	"37.07554"	"590.8"	"100.000"	"38.9263"	"10832"	"10832"	"10812"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"748.4"	""	"655.3"	""	"695.0"	""	"1108.9"	""	"1200.1"	"1206.7"	""	"739"	"27"	"35.000"	"28.000"	"0.0780934200219641"	"25"	"0.0002479"	"0.005179"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTTVTGLGR"	"[K].dTTVTGLGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"574.82910"	"1148.65093"	"1148.64727"	"3.19"	"0.00183"	"8/72"	"8"	"72"	"9906950.56072998"	"HCD"	"MS2"	"39.60301"	"577.0"	"100.000"	"39.1177"	"10901"	"10901"	"10884"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"681.8"	""	"639.9"	""	"674.9"	""	"1080.0"	""	"1186.8"	"1227.1"	""	"771"	"26"	"35.000"	"28.000"	"0.0893355637562848"	"23"	"0.0004639"	"0.007489"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGGNSK"	"[K].dLGGNSk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"574.83734"	"1148.66741"	"1148.66756"	"-0.13"	"-0.00008"	"6/62"	"6"	"62"	"3432748.1272583"	"HCD"	"MS2"	"11.1668"	"266.8"	"100.000"	"31.3420"	"7749"	"7749"	"7727"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"519.0"	""	"351.8"	""	"369.9"	""	"371.4"	""	"470.1"	"443.0"	""	"659"	"26"	"35.000"	"28.000"	"0.0753104805712204"	"25"	"0.003967"	"0.04186"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISGGNDK"	"[R].iSGGNDk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"0.1739"	"0.0000"	"1"	"1"	"1"	"574.83734"	"1148.66741"	"1148.66756"	"-0.13"	"-0.00008"	"6/60"	"6"	"60"	"3388363.01965332"	"HCD"	"MS2"	"7.528472"	"257.8"	"100.000"	"28.9902"	"6807"	"6807"	"6788"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"449.1"	""	"351.3"	""	"360.9"	""	"438.1"	""	"444.2"	"395.0"	""	"659"	"23"	"35.000"	"28.000"	"0.165903450595615"	""	"0.006685"	"0.07543"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGGNSK"	"[K].dLGGNSk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"574.83777"	"1148.66826"	"1148.66756"	"0.61"	"0.00035"	"6/62"	"6"	"62"	"3994855.15484619"	"HCD"	"MS2"	"19.67643"	"314.0"	"100.000"	"31.3208"	"7750"	"7750"	"7726"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"616.7"	""	"430.6"	""	"451.6"	""	"438.4"	""	"525.2"	"512.6"	""	"666"	"19"	"35.000"	"28.000"	"0.390341056727527"	"21"	"0.007213"	"0.08301"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SCHTGVDR"	"[K].scHTGVDR.[T]"	"N-Term(TMT6plex); C2(Methylthio)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"575.27008"	"1149.53288"	"1149.53423"	"-1.17"	"-0.00067"	"7/68"	"7"	"68"	"7017435.12805176"	"HCD"	"MS2"	"16.5413"	"323.5"	"100.000"	"21.6077"	"3823"	"3823"	"3804"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"595.3"	""	"434.1"	""	"565.3"	""	"440.8"	"0.5"	"538.1"	"481.4"	""	"222"	"35"	"30.000"	"23.000"	"0.00356716319789075"	"21"	"0.0006732"	"0.008834"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SCHTGVDR"	"[K].scHTGVDR.[T]"	"N-Term(TMT6plex); C2(Methylthio)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"575.27069"	"1149.53411"	"1149.53423"	"-0.11"	"-0.00006"	"7/68"	"7"	"68"	"6457905.73828125"	"HCD"	"MS2"	"21.98515"	"316.8"	"100.000"	"21.6494"	"3822"	"3822"	"3806"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"580.6"	""	"423.9"	""	"517.1"	""	"452.6"	"4.8"	"545.6"	"468.4"	""	"255"	"35"	"31.000"	"24.000"	"0.0040974171867664"	"20"	"0"	"0.002924"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASFNNPDR"	"[R].aSFNNPDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"575.29559"	"1149.58391"	"1149.58500"	"-0.95"	"-0.00055"	"7/74"	"7"	"74"	"5417913.13464355"	"HCD"	"MS2"	"35.81564"	"300.9"	"100.000"	"29.1488"	"6872"	"6872"	"6848"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"402.2"	""	"299.5"	""	"364.7"	""	"589.8"	""	"618.8"	"581.7"	""	"518"	"31"	"34.000"	"27.000"	"0.0188061442975705"	"27"	"0.0001301"	"0.004881"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASFNNPDR"	"[R].aSFNNPDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"575.29584"	"1149.58440"	"1149.58500"	"-0.53"	"-0.00030"	"7/74"	"7"	"74"	"5564743.27148438"	"HCD"	"MS2"	"22.27757"	"285.0"	"100.000"	"29.1999"	"6880"	"6880"	"6859"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"362.7"	""	"276.4"	""	"341.0"	""	"568.7"	""	"591.9"	"568.4"	""	"521"	"30"	"34.000"	"27.000"	"0.0255157141198966"	"26"	"0.0002479"	"0.005026"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDQAFGVPR"	"[R].LFDQAFGVPR.[F]"	""	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"575.30536"	"1149.60344"	"1149.60512"	"-1.46"	"-0.00084"	"8/84"	"8"	"84"	"565372.335754395"	"HCD"	"MS2"	"15.88541"	"14.0"	"100.000"	"76.0676"	"25891"	"25891"	"25871"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.0"	""	"15.3"	""	"25.1"	""	"23.7"	""	"22.8"	"27.0"	"NoQuanLabels"	"666"	"36"	"35.000"	"28.000"	"0.00904574276523414"	"23"	"0.004069"	"0.0442"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDQAFGVPR"	"[R].LFDQAFGVPR.[F]"	""	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"575.30542"	"1149.60356"	"1149.60512"	"-1.35"	"-0.00078"	"5/84"	"5"	"84"	"434028.757873535"	"HCD"	"MS2"	"39.15212"	"11.6"	"100.000"	"75.9070"	"25836"	"25836"	"25808"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.1"	""	"16.4"	""	"16.1"	""	"20.4"	"1.8"	"19.6"	"22.5"	"NoQuanLabels"	"666"	"34"	"35.000"	"28.000"	"0.0127187442189735"	"25"	"0.004022"	"0.04312"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPYALVR"	"[K].sDPYALVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"575.32599"	"1149.64470"	"1149.64654"	"-1.60"	"-0.00092"	"7/58"	"7"	"58"	"1928974.73773193"	"HCD"	"MS2"	"0"	"83.1"	"100.000"	"55.2278"	"17453"	"17453"	"17431"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"105.9"	""	"101.0"	""	"117.9"	""	"134.1"	"0.2"	"164.4"	"164.9"	""	"681"	"29"	"35.000"	"28.000"	"0.0394563689770821"	"26"	"0.0001301"	"0.004583"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPYALVR"	"[K].sDPYALVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"575.32635"	"1149.64543"	"1149.64654"	"-0.96"	"-0.00055"	"6/58"	"6"	"58"	"1790122.01452637"	"HCD"	"MS2"	"14.80725"	"83.5"	"100.000"	"54.9979"	"17373"	"17373"	"17352"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"112.0"	""	"97.9"	""	"101.4"	""	"140.0"	""	"169.9"	"172.4"	""	"679"	"32"	"35.000"	"28.000"	"0.02370499011842"	"26"	"0"	"0.003511"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLLFEGR"	"[K].eGLLFEGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.1765"	"0.0000"	"1"	"1"	"1"	"575.32642"	"1149.64556"	"1149.64654"	"-0.86"	"-0.00049"	"6/66"	"6"	"66"	"1181111.09210205"	"HCD"	"MS2"	"28.00952"	"59.8"	"100.000"	"69.0910"	"23072"	"23072"	"23054"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.5"	""	"76.8"	""	"79.0"	""	"87.7"	""	"114.0"	"122.8"	""	"690"	"17"	"35.000"	"28.000"	"0.730834591660733"	"27"	"0.000936"	"0.01343"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPYALVR"	"[K].sDPYALVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"575.32642"	"1149.64556"	"1149.64654"	"-0.86"	"-0.00049"	"6/58"	"6"	"58"	"3801705.24633789"	"HCD"	"MS2"	"1.627551"	"147.6"	"100.000"	"55.2970"	"17496"	"17496"	"17479"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"197.5"	""	"161.8"	""	"202.5"	""	"232.8"	"2.6"	"298.2"	"305.8"	""	"690"	"30"	"35.000"	"28.000"	"0.0317555102254844"	"26"	"0.0003538"	"0.007273"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLLFEGR"	"[K].eGLLFEGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"575.32648"	"1149.64568"	"1149.64654"	"-0.75"	"-0.00043"	"5/66"	"5"	"66"	"573273.600097656"	"HCD"	"MS2"	"44.62313"	"33.1"	"100.000"	"69.6209"	"23288"	"23288"	"23262"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.7"	""	"43.1"	""	"47.6"	""	"45.2"	""	"48.8"	"82.5"	""	"690"	"8"	"35.000"	"28.000"	"5.24588897757711"	"17"	"0.007476"	"0.08953"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPYALVR"	"[K].sDPYALVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"575.32672"	"1149.64617"	"1149.64654"	"-0.32"	"-0.00019"	"7/58"	"7"	"58"	"3498189.87261963"	"HCD"	"MS2"	"1.274733"	"140.4"	"100.000"	"55.5200"	"17572"	"17572"	"17554"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"187.3"	""	"157.7"	""	"190.6"	""	"223.2"	""	"272.9"	"303.3"	""	"700"	"31"	"35.000"	"28.000"	"0.0269816214172551"	"28"	"0.0001301"	"0.0042"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLLFEGR"	"[K].eGLLFEGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"575.32703"	"1149.64678"	"1149.64654"	"0.21"	"0.00012"	"7/66"	"7"	"66"	"1466277.44573975"	"HCD"	"MS2"	"30.49175"	"68.6"	"100.000"	"69.2701"	"23131"	"23131"	"23107"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.1"	""	"90.8"	""	"92.3"	""	"115.4"	""	"119.9"	"131.7"	""	"699"	"23"	"35.000"	"28.000"	"0.191182079031443"	"26"	"0.0001301"	"0.004909"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDDK"	"[R].GLFIIDDk.[G]"	"K8(TMT6plex)"	"2"	"2"	"Q9Z0V5; Q63716"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1;Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q9Z0V5; Q63716"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1; Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"575.33972"	"1149.67217"	"1149.67169"	"0.41"	"0.00024"	"5/58"	"5"	"58"	"280305.034545898"	"HCD"	"MS2"	"60.70232"	"13.6"	"100.000"	"87.4101"	"30413"	"30413"	"30392"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.7"	""	"16.7"	""	"17.1"	""	"28.3"	""	"27.8"	"23.6"	""	"593"	"33"	"34.000"	"27.000"	"0.0156684017151341"	""	"0.00736"	"0.08768"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAIGEGMTR"	"[K].sAIGEGMTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"575.80750"	"1150.60771"	"1150.60877"	"-0.92"	"-0.00053"	"7/78"	"7"	"78"	"5654014.58654785"	"HCD"	"MS2"	"4.243244"	"292.5"	"100.000"	"33.9646"	"8813"	"8813"	"8793"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"483.0"	""	"435.1"	""	"437.4"	""	"288.2"	"0.6"	"543.4"	"583.1"	""	"636"	"51"	"35.000"	"28.000"	"0.0002508575174027"	"21"	"0"	"0.0004602"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAIGEGMTR"	"[K].sAIGEGMTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"575.80774"	"1150.60820"	"1150.60877"	"-0.50"	"-0.00029"	"7/78"	"7"	"78"	"6213394.70391846"	"HCD"	"MS2"	"0"	"280.0"	"100.000"	"33.9349"	"8811"	"8811"	"8792"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"482.4"	""	"424.8"	""	"426.1"	""	"275.3"	""	"496.6"	"553.2"	""	"608"	"51"	"34.000"	"27.000"	"0.000242590384929465"	"20"	"0"	"0.0004383"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALAMGADR"	"[R].tALAmGADR.[G]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"575.80859"	"1150.60991"	"1150.60877"	"0.99"	"0.00057"	"8/78"	"8"	"78"	"1296513.96295166"	"HCD"	"MS2"	"30.11347"	"85.5"	"100.000"	"28.0794"	"6424"	"6424"	"6405"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"123.1"	""	"96.0"	""	"122.4"	""	"157.6"	""	"153.7"	"157.9"	""	"641"	"23"	"35.000"	"28.000"	"0.153400944589406"	"19"	"0.005067"	"0.0571"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDFLER"	"[K].iEDFLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"575.81848"	"1150.62969"	"1150.63055"	"-0.75"	"-0.00043"	"10/56"	"10"	"56"	"5288480.93865967"	"HCD"	"MS2"	"0"	"213.4"	"100.000"	"88.3956"	"30797"	"30797"	"30789"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"307.9"	""	"272.4"	""	"313.8"	""	"345.9"	""	"393.5"	"388.8"	""	"712"	"29"	"35.000"	"28.000"	"0.0405928924371776"	"26"	"0.004022"	"0.0426"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDFLER"	"[K].iEDFLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"575.81860"	"1150.62993"	"1150.63055"	"-0.54"	"-0.00031"	"5/56"	"5"	"56"	"5331002.96685791"	"HCD"	"MS2"	"0.4957481"	"223.1"	"100.000"	"88.4157"	"30808"	"30808"	"30802"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"322.0"	""	"283.1"	""	"344.1"	""	"356.4"	""	"400.9"	"411.0"	""	"712"	"35"	"35.000"	"28.000"	"0.0109509046604769"	"25"	"0.003507"	"0.03705"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDFLER"	"[K].iEDFLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"575.81873"	"1150.63017"	"1150.63055"	"-0.33"	"-0.00019"	"10/56"	"10"	"56"	"1836746.55718994"	"HCD"	"MS2"	"0"	"84.8"	"100.000"	"88.6582"	"30896"	"30896"	"30889"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"102.8"	""	"117.5"	""	"129.8"	""	"143.0"	""	"162.5"	"153.5"	""	"722"	"32"	"35.000"	"28.000"	"0.0216026585816775"	"25"	"0.002973"	"0.0296"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDFLER"	"[K].iEDFLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"575.81885"	"1150.63042"	"1150.63055"	"-0.12"	"-0.00007"	"5/56"	"5"	"56"	"1923633.08081055"	"HCD"	"MS2"	"0"	"59.0"	"100.000"	"88.6721"	"30905"	"30905"	"30899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"81.9"	""	"77.6"	""	"87.9"	""	"100.1"	"0.6"	"105.5"	"106.1"	""	"722"	"35"	"35.000"	"28.000"	"0.0117627049061725"	"24"	"0.001886"	"0.02176"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFDSAQR"	"[R].vVFDSAQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"575.82385"	"1150.64043"	"1150.64179"	"-1.18"	"-0.00068"	"6/60"	"6"	"60"	"1664272.20367432"	"HCD"	"MS2"	"6.7797"	"101.7"	"100.000"	"46.0553"	"13731"	"13731"	"13705"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"187.8"	""	"121.6"	""	"144.5"	""	"140.5"	""	"174.5"	"194.4"	""	"602"	"31"	"34.000"	"27.000"	"0.0259756542877858"	"20"	"0.001036"	"0.01362"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNIAYGLR"	"[K].dNIAYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36372"	"Antigen peptide transporter 2 OS=Rattus norvegicus OX=10116 GN=Tap2 PE=1 SV=1"	"P36372"	"Antigen peptide transporter 2 OS=Rattus norvegicus OX=10116 GN=Tap2 PE=1 SV=1"	"0"	"2"	"2"	"0.2973"	"0.0000"	"1"	"1"	"1"	"575.82422"	"1150.64116"	"1150.64179"	"-0.55"	"-0.00031"	"11/68"	"11"	"68"	"2897246.46142578"	"HCD"	"MS2"	"9.76251"	"141.2"	"100.000"	"52.4834"	"16350"	"16350"	"16328"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"194.8"	""	"172.1"	""	"177.0"	""	"237.5"	"1.1"	"277.0"	"280.3"	""	"615"	"37"	"34.000"	"27.000"	"0.00567342241397688"	""	"0.000936"	"0.01158"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFDSAQR"	"[R].vVFDSAQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"575.82428"	"1150.64128"	"1150.64179"	"-0.44"	"-0.00025"	"6/60"	"6"	"60"	"1157903.64160156"	"HCD"	"MS2"	"0"	"76.2"	"100.000"	"46.1680"	"13765"	"13765"	"13741"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"141.8"	""	"99.9"	""	"96.1"	""	"108.7"	""	"132.3"	"142.6"	""	"632"	"34"	"34.000"	"28.000"	"0.0128436092016207"	"23"	"0.0004639"	"0.007668"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNIAYGLR"	"[K].dNIAYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36372"	"Antigen peptide transporter 2 OS=Rattus norvegicus OX=10116 GN=Tap2 PE=1 SV=1"	"P36372"	"Antigen peptide transporter 2 OS=Rattus norvegicus OX=10116 GN=Tap2 PE=1 SV=1"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"575.82428"	"1150.64128"	"1150.64179"	"-0.44"	"-0.00025"	"6/68"	"6"	"68"	"2987500.61566162"	"HCD"	"MS2"	"4.516748"	"145.3"	"100.000"	"52.7791"	"16459"	"16459"	"16439"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"189.2"	""	"189.4"	""	"192.8"	""	"247.9"	""	"297.4"	"263.8"	""	"632"	"32"	"34.000"	"28.000"	"0.0189970901044716"	""	"0.001728"	"0.02019"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDFVVDR"	"[K].aTDFVVDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"576.31543"	"1151.62358"	"1151.62580"	"-1.93"	"-0.00111"	"7/66"	"7"	"66"	"6264564.23272705"	"HCD"	"MS2"	"3.175835"	"278.9"	"100.000"	"52.8479"	"16488"	"16488"	"16471"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"448.7"	""	"445.9"	""	"410.2"	""	"403.3"	""	"473.4"	"457.7"	""	"652"	"32"	"35.000"	"28.000"	"0.022398431144464"	"27"	"0.0002479"	"0.005932"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDFVVDR"	"[K].aTDFVVDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"576.31549"	"1151.62370"	"1151.62580"	"-1.82"	"-0.00105"	"7/66"	"7"	"66"	"8279648.5680542"	"HCD"	"MS2"	"2.651281"	"368.1"	"100.000"	"52.5937"	"16395"	"16395"	"16376"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"599.0"	"3.4"	"554.6"	""	"575.5"	""	"520.2"	""	"599.6"	"632.6"	""	"644"	"33"	"35.000"	"28.000"	"0.0175734031271389"	"23"	"0.0002479"	"0.005755"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDFVVDR"	"[K].aTDFVVDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"576.31604"	"1151.62480"	"1151.62580"	"-0.87"	"-0.00050"	"5/66"	"5"	"66"	"449656.874145508"	"HCD"	"MS2"	"26.73978"	"31.4"	"100.000"	"53.8786"	"16909"	"16909"	"16880"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.1"	""	"38.9"	""	"42.2"	""	"44.7"	"0.9"	"62.2"	"56.9"	""	"670"	"17"	"35.000"	"28.000"	"0.676152731833322"	"14"	"0.00912"	"0.1187"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPVVSYR"	"[K].sDPVVSYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"576.31628"	"1151.62529"	"1151.62580"	"-0.44"	"-0.00026"	"6/66"	"6"	"66"	"12099711.0725708"	"HCD"	"MS2"	"3.33071"	"479.7"	"100.000"	"39.1590"	"10918"	"10918"	"10899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"684.2"	""	"600.6"	""	"665.6"	""	"793.7"	""	"897.7"	"915.6"	""	"690"	"28"	"35.000"	"28.000"	"0.0518583978301057"	"16"	"0.0008629"	"0.01013"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPVVSYR"	"[K].sDPVVSYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"576.31628"	"1151.62529"	"1151.62580"	"-0.44"	"-0.00026"	"6/66"	"6"	"66"	"15856736.3728638"	"HCD"	"MS2"	"0"	"615.6"	"100.000"	"38.9949"	"10860"	"10860"	"10844"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"923.2"	""	"758.4"	""	"880.5"	""	"980.6"	""	"1141.6"	"1157.2"	""	"690"	"29"	"35.000"	"28.000"	"0.0425421167463973"	"17"	"0.0003538"	"0.006906"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDFVVDR"	"[K].aTDFVVDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"576.31635"	"1151.62541"	"1151.62580"	"-0.34"	"-0.00020"	"7/66"	"7"	"66"	"1871973.3001709"	"HCD"	"MS2"	"10.13921"	"99.3"	"100.000"	"53.4783"	"16745"	"16745"	"16722"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"159.2"	""	"142.5"	""	"158.8"	""	"140.1"	""	"161.4"	"184.0"	""	"686"	"34"	"35.000"	"28.000"	"0.0146654069949994"	"21"	"0"	"0.003293"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDFVVDR"	"[K].aTDFVVDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"576.31641"	"1151.62554"	"1151.62580"	"-0.23"	"-0.00013"	"6/66"	"6"	"66"	"557328.643249512"	"HCD"	"MS2"	"17.32167"	"35.3"	"100.000"	"53.5282"	"16777"	"16777"	"16748"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.4"	""	"47.8"	""	"59.6"	""	"51.1"	"0.5"	"58.4"	"60.5"	""	"686"	"24"	"35.000"	"28.000"	"0.134677212842063"	"17"	"0.000936"	"0.01178"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDFVVDR"	"[K].aTDFVVDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"576.31641"	"1151.62554"	"1151.62580"	"-0.23"	"-0.00013"	"7/66"	"7"	"66"	"1961652.79864502"	"HCD"	"MS2"	"6.515517"	"99.1"	"100.000"	"53.2015"	"16643"	"16643"	"16622"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"169.9"	""	"137.2"	""	"165.5"	""	"138.8"	"0.3"	"161.0"	"163.4"	""	"686"	"30"	"35.000"	"28.000"	"0.0355872246625578"	"25"	"0.0001301"	"0.003903"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LETEFQR"	"[R].lETEFQR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62894"	"Extracellular matrix protein 1 OS=Rattus norvegicus OX=10116 GN=Ecm1 PE=1 SV=2"	"Q62894"	"Extracellular matrix protein 1 OS=Rattus norvegicus OX=10116 GN=Ecm1 PE=1 SV=2"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"576.31641"	"1151.62554"	"1151.62580"	"-0.23"	"-0.00013"	"4/54"	"4"	"54"	"2306520.95849609"	"HCD"	"MS2"	"16.73919"	"122.1"	"100.000"	"51.1948"	"15824"	"15824"	"15799"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"146.1"	""	"148.7"	""	"140.1"	""	"240.2"	""	"259.2"	"225.5"	""	"686"	"22"	"35.000"	"28.000"	"0.238942894339993"	"28"	"0.006769"	"0.0784"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPVVSYR"	"[K].sDPVVSYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"576.31641"	"1151.62554"	"1151.62580"	"-0.23"	"-0.00013"	"6/66"	"6"	"66"	"7135479.92919922"	"HCD"	"MS2"	"6.784169"	"346.6"	"100.000"	"39.2781"	"10976"	"10976"	"10962"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"486.0"	""	"405.4"	""	"464.8"	""	"520.4"	""	"704.3"	"711.4"	""	"686"	"28"	"35.000"	"28.000"	"0.0569238309251083"	"17"	"0.0006732"	"0.008969"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDFVVDR"	"[K].aTDFVVDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"576.31641"	"1151.62554"	"1151.62580"	"-0.23"	"-0.00013"	"7/66"	"7"	"66"	"32408959.123291"	"HCD"	"MS2"	"1.091296"	"416.2"	"28.769"	"53.1517"	"16612"	"16612"	"16595"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"705.2"	""	"667.8"	""	"650.8"	""	"551.3"	""	"658.2"	"706.6"	""	"686"	"34"	"35.000"	"28.000"	"0.0129507261487418"	"17"	"0.0003538"	"0.007257"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPVVSYR"	"[K].sDPVVSYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"576.31641"	"1151.62554"	"1151.62580"	"-0.23"	"-0.00013"	"6/66"	"6"	"66"	"8495475.49719238"	"HCD"	"MS2"	"0"	"395.0"	"100.000"	"39.4560"	"11039"	"11039"	"11025"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"558.1"	"2.0"	"468.0"	""	"538.8"	""	"604.4"	""	"785.3"	"798.7"	""	"686"	"30"	"35.000"	"28.000"	"0.0350182242911734"	"16"	"0.0006732"	"0.008315"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDFVVDR"	"[K].aTDFVVDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"576.31665"	"1151.62602"	"1151.62580"	"0.19"	"0.00011"	"7/66"	"7"	"66"	"30418870.1346436"	"HCD"	"MS2"	"0.761035"	"425.4"	"33.236"	"52.8839"	"16514"	"16514"	"16497"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"736.6"	""	"654.6"	""	"678.1"	""	"569.9"	""	"650.8"	"729.5"	""	"684"	"33"	"35.000"	"28.000"	"0.0153117950028316"	"18"	"0.0001301"	"0.005"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LETEFQR"	"[R].lETEFQR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62894"	"Extracellular matrix protein 1 OS=Rattus norvegicus OX=10116 GN=Ecm1 PE=1 SV=2"	"Q62894"	"Extracellular matrix protein 1 OS=Rattus norvegicus OX=10116 GN=Ecm1 PE=1 SV=2"	"0"	"2"	"2"	"0.2759"	"0.0000"	"1"	"1"	"1"	"576.31677"	"1151.62627"	"1151.62580"	"0.40"	"0.00023"	"5/54"	"5"	"54"	"2812518.01898193"	"HCD"	"MS2"	"14.52131"	"148.8"	"100.000"	"51.6100"	"15982"	"15982"	"15963"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"164.0"	""	"182.5"	""	"181.6"	""	"297.1"	""	"301.7"	"288.4"	""	"688"	"29"	"35.000"	"28.000"	"0.0395875333796886"	""	"0.00413"	"0.04506"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIIHDPGR"	"[K].dIIHDPGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"0"	"3"	"3"	"0.2381"	"0.0000"	"1"	"1"	"1"	"384.55005"	"1151.63559"	"1151.63704"	"-1.25"	"-0.00048"	"6/64"	"6"	"64"	"7323568.47906494"	"HCD"	"MS2"	"9.905958"	"104.5"	"100.000"	"31.1073"	"7653"	"7653"	"7633"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"161.3"	""	"150.4"	""	"164.1"	""	"171.0"	"1.6"	"190.1"	"149.6"	""	"691"	"21"	"35.000"	"28.000"	"0.306512402159116"	""	"0.0023"	"0.02335"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIIHDPGR"	"[K].dIIHDPGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"0"	"3"	"3"	"0.4545"	"0.0000"	"1"	"1"	"1"	"384.55011"	"1151.63578"	"1151.63704"	"-1.09"	"-0.00042"	"6/64"	"6"	"64"	"13987836.1962891"	"HCD"	"MS2"	"6.36796"	"146.1"	"71.083"	"31.2979"	"7741"	"7741"	"7726"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"201.0"	""	"210.8"	""	"228.9"	""	"238.4"	""	"260.3"	"245.5"	""	"691"	"22"	"35.000"	"28.000"	"0.206751206093341"	"25"	"0.0003538"	"0.007143"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIIHDPGR"	"[K].dIIHDPGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"384.55017"	"1151.63596"	"1151.63704"	"-0.94"	"-0.00036"	"6/64"	"6"	"64"	"2423934.26074219"	"HCD"	"MS2"	"14.32457"	"59.8"	"100.000"	"30.9898"	"7616"	"7616"	"7606"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.3"	""	"76.5"	""	"86.8"	""	"101.5"	""	"105.4"	"110.8"	""	"684"	"20"	"35.000"	"28.000"	"0.313347407621724"	"28"	"0.003449"	"0.03404"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIIHDPGR"	"[K].dIIHDPGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"0"	"3"	"3"	"0.5217"	"0.0000"	"1"	"1"	"1"	"384.55023"	"1151.63614"	"1151.63704"	"-0.78"	"-0.00030"	"4/64"	"4"	"64"	"7090836.41925049"	"HCD"	"MS2"	"20.86996"	"178.2"	"100.000"	"31.4019"	"7774"	"7774"	"7757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"238.1"	""	"268.0"	""	"263.7"	""	"263.7"	""	"349.0"	"307.2"	""	"691"	"23"	"35.000"	"28.000"	"0.186400920078977"	"25"	"0.001465"	"0.01843"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHAALEPR"	"[R].eHAALEPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"576.32172"	"1151.63616"	"1151.63704"	"-0.77"	"-0.00044"	"6/66"	"6"	"66"	"1648726.51391602"	"HCD"	"MS2"	"13.89681"	"63.5"	"100.000"	"21.8530"	"3921"	"3921"	"3903"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"94.5"	""	"82.5"	""	"80.8"	""	"110.1"	"1.6"	"110.5"	"121.8"	""	"691"	"46"	"35.000"	"28.000"	"0.000842263637746404"	"19"	"0"	"0.002768"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHAALEPR"	"[R].eHAALEPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"576.32178"	"1151.63628"	"1151.63704"	"-0.66"	"-0.00038"	"6/66"	"6"	"66"	"1610663.21264648"	"HCD"	"MS2"	"0"	"96.0"	"100.000"	"21.9039"	"3924"	"3924"	"3907"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"161.1"	""	"135.7"	""	"126.8"	""	"149.5"	""	"167.7"	"173.6"	""	"691"	"50"	"35.000"	"28.000"	"0.000382338517364284"	"20"	"0"	"0.002644"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DIIHDPGR"	"[K].dIIHDPGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"0"	"2"	"2"	"0.0385"	"0.0000"	"1"	"1"	"1"	"576.32312"	"1151.63896"	"1151.63704"	"1.67"	"0.00096"	"4/64"	"4"	"64"	"1853402.10339355"	"HCD"	"MS2"	"25.81401"	"81.3"	"100.000"	"31.1759"	"7691"	"7691"	"7673"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"116.0"	""	"122.9"	""	"115.4"	""	"135.3"	""	"150.5"	"134.1"	""	"675"	"26"	"35.000"	"28.000"	"0.0815218031625166"	""	"0.00447"	"0.04853"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATGQRPHR"	"[R].aTGQRPHR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"576.33276"	"1151.65825"	"1151.65950"	"-1.09"	"-0.00063"	"7/64"	"7"	"64"	"523807.399597168"	"HCD"	"MS2"	"0"	"23.4"	"100.000"	"18.4505"	"2567"	"2567"	"2560"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.8"	""	"30.2"	""	"42.7"	""	"31.9"	""	"39.0"	"37.3"	""	"577"	"21"	"34.000"	"27.000"	"0.233962265190833"	"18"	"0.002973"	"0.02971"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATGQRPHR"	"[R].aTGQRPHR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"576.33295"	"1151.65862"	"1151.65950"	"-0.77"	"-0.00044"	"7/64"	"7"	"64"	"500964.128295898"	"HCD"	"MS2"	"0"	"19.8"	"100.000"	"18.4533"	"2564"	"2564"	"2558"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.0"	""	"24.1"	""	"33.7"	""	"26.6"	""	"35.4"	"28.3"	""	"572"	"13"	"34.000"	"27.000"	"1.40723307204895"	"14"	"0.00736"	"0.08572"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTEASTK"	"[K].gTEASTk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JLH7"	"CDK5 regulatory subunit-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cdk5rap3 PE=1 SV=1"	"Q9JLH7"	"CDK5 regulatory subunit-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cdk5rap3 PE=1 SV=1"	"0"	"2"	"2"	"0.3929"	"0.0000"	"1"	"1"	"1"	"576.33679"	"1151.66631"	"1151.66722"	"-0.80"	"-0.00046"	"10/56"	"10"	"56"	"2627736.92205811"	"HCD"	"MS2"	"28.29282"	"209.8"	"100.000"	"22.0089"	"3984"	"3984"	"3961"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"301.0"	""	"264.9"	""	"266.2"	""	"333.5"	""	"406.7"	"421.3"	""	"524"	"28"	"34.000"	"27.000"	"0.0444939836944977"	""	"0.00413"	"0.04557"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTEASTK"	"[K].gTEASTk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JLH7"	"CDK5 regulatory subunit-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cdk5rap3 PE=1 SV=1"	"Q9JLH7"	"CDK5 regulatory subunit-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cdk5rap3 PE=1 SV=1"	"0"	"2"	"2"	"0.4138"	"0.0000"	"1"	"1"	"1"	"576.33759"	"1151.66789"	"1151.66722"	"0.58"	"0.00034"	"10/56"	"10"	"56"	"2625787.65185547"	"HCD"	"MS2"	"23.03156"	"202.6"	"100.000"	"22.0389"	"3979"	"3979"	"3957"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"281.5"	""	"250.9"	""	"253.9"	""	"347.5"	""	"384.9"	"408.2"	""	"510"	"29"	"34.000"	"27.000"	"0.0300289523247806"	""	"0.002937"	"0.02771"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPPVGGHR"	"[R].mGPPVGGHR.[R]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"384.87534"	"1152.61145"	"1152.61453"	"-2.67"	"-0.00102"	"7/66"	"7"	"66"	"10285769.2618408"	"HCD"	"MS2"	"6.780107"	"176.0"	"100.000"	"20.0344"	"3187"	"3187"	"3174"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"249.9"	""	"222.6"	""	"210.4"	""	"294.8"	"2.2"	"328.9"	"360.8"	""	"563"	"27"	"34.000"	"27.000"	"0.0504055547910935"	"14"	"0.000936"	"0.01244"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPPVGGHR"	"[R].mGPPVGGHR.[R]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"3"	"3"	"0.7917"	"0.0000"	"1"	"1"	"1"	"384.87558"	"1152.61219"	"1152.61453"	"-2.03"	"-0.00078"	"6/66"	"6"	"66"	"2109734.81854248"	"HCD"	"MS2"	"24.87279"	"106.1"	"100.000"	"20.0790"	"3210"	"3210"	"3184"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"154.1"	""	"133.1"	""	"139.5"	""	"166.1"	"2.2"	"205.3"	"205.5"	""	"565"	"24"	"34.000"	"27.000"	"0.108897636040581"	"19"	"0.003449"	"0.03548"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQAVHER"	"[R].lAQAVHER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"384.89395"	"1152.66730"	"1152.66867"	"-1.19"	"-0.00046"	"6/66"	"6"	"66"	"7376534.35534668"	"HCD"	"MS2"	"24.59616"	"154.5"	"100.000"	"25.9823"	"5573"	"5573"	"5554"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"208.0"	""	"224.5"	""	"231.2"	""	"249.2"	"0.2"	"274.6"	"275.5"	""	"399"	"40"	"32.000"	"26.000"	"0.00221790479592678"	"20"	"0.0001301"	"0.004863"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQAVHER"	"[R].lAQAVHER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"0"	"3"	"3"	"0.8780"	"0.0000"	"1"	"1"	"1"	"384.89398"	"1152.66739"	"1152.66867"	"-1.11"	"-0.00043"	"6/66"	"6"	"66"	"7374622.8034668"	"HCD"	"MS2"	"23.01879"	"158.3"	"100.000"	"25.8902"	"5551"	"5551"	"5528"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"206.9"	""	"232.5"	""	"232.6"	""	"261.3"	""	"277.3"	"289.3"	""	"399"	"41"	"32.000"	"26.000"	"0.00144524974034961"	"20"	"0.0001301"	"0.004986"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HDELTYF"	"[K].hDELTYF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.28931"	"1153.57134"	"1153.57271"	"-1.19"	"-0.00068"	"5/56"	"5"	"56"	"2510671.94836426"	"HCD"	"MS2"	"9.194392"	"43.7"	"100.000"	"68.9808"	"23027"	"23027"	"23007"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.1"	""	"47.7"	""	"56.8"	""	"71.5"	""	"89.5"	"98.6"	""	"458"	"25"	"33.000"	"26.000"	"0.0737624753203906"	"14"	"0.007213"	"0.08285"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HDELTYF"	"[K].hDELTYF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.28937"	"1153.57146"	"1153.57271"	"-1.08"	"-0.00062"	"5/56"	"5"	"56"	"1416467.84436035"	"HCD"	"MS2"	"12.94186"	"26.0"	"100.000"	"69.7541"	"23328"	"23328"	"23314"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.2"	""	"33.0"	""	"28.1"	""	"48.0"	""	"51.7"	"61.4"	""	"446"	"23"	"33.000"	"26.000"	"0.106489028025665"	"14"	"0.009021"	"0.1159"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HDELTYF"	"[K].hDELTYF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.28937"	"1153.57146"	"1153.57271"	"-1.08"	"-0.00062"	"6/56"	"6"	"56"	"12825734.9122925"	"HCD"	"MS2"	"0"	"120.1"	"75.650"	"69.2753"	"23147"	"23147"	"23129"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"127.9"	""	"95.7"	""	"147.4"	""	"225.5"	""	"259.4"	"287.5"	""	"446"	"31"	"33.000"	"26.000"	"0.0168773735589677"	"14"	"0.008052"	"0.09911"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HDELTYF"	"[K].hDELTYF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.28955"	"1153.57182"	"1153.57271"	"-0.76"	"-0.00044"	"6/56"	"6"	"56"	"3168143.58197021"	"HCD"	"MS2"	"7.581368"	"51.0"	"100.000"	"69.1436"	"23079"	"23079"	"23059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.3"	""	"52.8"	""	"61.3"	""	"94.7"	"3.2"	"105.5"	"112.0"	""	"452"	"33"	"33.000"	"26.000"	"0.0126796842583338"	"15"	"0.005254"	"0.05938"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HDELTYF"	"[K].hDELTYF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.28961"	"1153.57195"	"1153.57271"	"-0.66"	"-0.00038"	"5/56"	"5"	"56"	"12049913.0159912"	"HCD"	"MS2"	"0.1497985"	"108.5"	"78.280"	"69.4477"	"23204"	"23204"	"23187"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"118.7"	""	"96.4"	""	"138.8"	""	"192.6"	"3.9"	"221.7"	"259.9"	""	"452"	"27"	"33.000"	"26.000"	"0.0502468035287217"	"14"	"0.007627"	"0.09352"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGESSK"	"[K].sTGESSk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"577.32611"	"1153.64495"	"1153.64649"	"-1.34"	"-0.00077"	"6/58"	"6"	"58"	"2369902.87408447"	"HCD"	"MS2"	"6.950644"	"188.7"	"100.000"	"20.7642"	"3480"	"3480"	"3462"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"228.9"	""	"188.6"	""	"200.2"	""	"390.1"	""	"416.0"	"372.6"	""	"493"	"35"	"33.000"	"26.000"	"0.00799497156766146"	"23"	"0.003507"	"0.03611"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGESSK"	"[K].sTGESSk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"577.32715"	"1153.64702"	"1153.64649"	"0.46"	"0.00027"	"6/58"	"6"	"58"	"2604544.43530273"	"HCD"	"MS2"	"11.79352"	"202.4"	"100.000"	"20.7885"	"3475"	"3475"	"3461"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"243.7"	""	"193.5"	""	"226.3"	""	"448.6"	""	"426.8"	"385.1"	""	"469"	"35"	"33.000"	"26.000"	"0.00757081871541613"	"23"	"0.002547"	"0.02532"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADIAHR"	"[K].eLADIAHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"385.22195"	"1153.65131"	"1153.65269"	"-1.19"	"-0.00046"	"5/62"	"5"	"62"	"11205694.7712402"	"HCD"	"MS2"	"2.949496"	"112.9"	"48.928"	"38.6877"	"10726"	"10726"	"10715"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"179.0"	""	"125.2"	""	"145.9"	""	"165.8"	"0.0"	"193.2"	"261.0"	""	"452"	"36"	"33.000"	"26.000"	"0.00582248581482582"	"26"	"0.0003538"	"0.006146"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADIAHR"	"[K].eLADIAHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"385.22211"	"1153.65177"	"1153.65269"	"-0.80"	"-0.00031"	"5/62"	"5"	"62"	"9065219.48065186"	"HCD"	"MS2"	"2.687414"	"158.9"	"84.113"	"38.4983"	"10658"	"10658"	"10645"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"233.3"	""	"176.3"	""	"201.1"	""	"244.2"	""	"266.6"	"385.5"	""	"447"	"36"	"33.000"	"26.000"	"0.00570528741144789"	"26"	"0.0023"	"0.02401"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADIAHR"	"[K].eLADIAHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"385.22214"	"1153.65186"	"1153.65269"	"-0.72"	"-0.00028"	"7/62"	"7"	"62"	"65250140.5439453"	"HCD"	"MS2"	"1.968078"	"175.1"	"14.138"	"38.3934"	"10607"	"10607"	"10590"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"287.1"	""	"207.1"	""	"217.5"	""	"265.8"	""	"276.3"	"408.4"	""	"446"	"30"	"33.000"	"26.000"	"0.0203847252847866"	"26"	"0.003449"	"0.03536"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADIAHR"	"[K].eLADIAHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"577.32983"	"1153.65239"	"1153.65269"	"-0.26"	"-0.00015"	"6/62"	"6"	"62"	"2781013.37982178"	"HCD"	"MS2"	"7.916257"	"134.5"	"100.000"	"38.4016"	"10618"	"10618"	"10599"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"210.3"	""	"150.6"	""	"185.9"	""	"194.0"	""	"247.7"	"288.0"	""	"457"	"34"	"33.000"	"26.000"	"0.0098375330497356"	"24"	"0.0001301"	"0.004967"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADIAHR"	"[K].eLADIAHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"577.32990"	"1153.65251"	"1153.65269"	"-0.15"	"-0.00009"	"6/62"	"6"	"62"	"4139828.16955566"	"HCD"	"MS2"	"12.17596"	"182.7"	"100.000"	"38.1004"	"10495"	"10495"	"10475"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"282.7"	""	"215.8"	""	"226.7"	""	"297.3"	""	"309.7"	"398.8"	""	"457"	"38"	"33.000"	"26.000"	"0.00383606718141005"	"24"	"0"	"0.002636"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADIAHR"	"[K].eLADIAHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"577.32996"	"1153.65264"	"1153.65269"	"-0.04"	"-0.00003"	"6/62"	"6"	"62"	"3712997.90802002"	"HCD"	"MS2"	"21.66855"	"180.7"	"100.000"	"38.2989"	"10568"	"10568"	"10546"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"275.4"	""	"226.2"	""	"222.8"	""	"284.3"	"5.5"	"302.5"	"395.5"	""	"457"	"35"	"33.000"	"26.000"	"0.00669709106539699"	"23"	"0"	"0.003318"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADIAHR"	"[K].eLADIAHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.6750"	"0.0000"	"1"	"1"	"1"	"385.22247"	"1153.65287"	"1153.65269"	"0.15"	"0.00006"	"7/62"	"7"	"62"	"67450270.5087891"	"HCD"	"MS2"	"1.956598"	"181.5"	"14.244"	"38.2017"	"10537"	"10537"	"10522"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"278.0"	""	"211.5"	""	"231.8"	""	"270.5"	""	"298.2"	"432.2"	""	"456"	"40"	"33.000"	"26.000"	"0.00249997028720646"	""	"0.001886"	"0.02166"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADIAHR"	"[K].eLADIAHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"577.33014"	"1153.65300"	"1153.65269"	"0.27"	"0.00016"	"6/62"	"6"	"62"	"2558413.82568359"	"HCD"	"MS2"	"11.89246"	"122.2"	"100.000"	"38.6001"	"10690"	"10690"	"10677"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"181.7"	""	"157.5"	""	"164.1"	""	"170.6"	""	"226.1"	"260.5"	""	"456"	"30"	"33.000"	"26.000"	"0.0249997028720646"	"22"	"0.0001301"	"0.003877"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADIAHR"	"[K].eLADIAHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"385.22281"	"1153.65387"	"1153.65269"	"1.03"	"0.00040"	"5/62"	"5"	"62"	"3747884.0380249"	"HCD"	"MS2"	"7.541751"	"98.2"	"100.000"	"38.0920"	"10484"	"10484"	"10462"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"146.3"	""	"123.5"	""	"121.8"	""	"173.5"	""	"166.1"	"199.8"	""	"400"	"39"	"33.000"	"26.000"	"0.00279917464514524"	""	"0.001812"	"0.02052"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADIAHR"	"[K].eLADIAHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"385.22290"	"1153.65415"	"1153.65269"	"1.27"	"0.00049"	"4/62"	"4"	"62"	"1256352.12078857"	"HCD"	"MS2"	"21.42408"	"45.5"	"100.000"	"38.8662"	"10808"	"10808"	"10780"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.4"	""	"46.8"	""	"77.0"	""	"72.9"	""	"92.2"	"95.4"	""	"396"	"23"	"32.000"	"25.000"	"0.110832005096032"	"22"	"0.004942"	"0.05472"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADIAHR"	"[K].eLADIAHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.6579"	"0.0000"	"1"	"1"	"1"	"385.22327"	"1153.65525"	"1153.65269"	"2.22"	"0.00085"	"5/62"	"5"	"62"	"3502887.55804443"	"HCD"	"MS2"	"36.22063"	"92.6"	"100.000"	"37.8936"	"10411"	"10411"	"10388"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"135.7"	""	"109.4"	""	"124.0"	""	"140.3"	""	"172.0"	"198.8"	""	"445"	"38"	"33.000"	"26.000"	"0.0031792890576872"	""	"0.0008629"	"0.01074"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGPPPEK"	"[R].aGPPPEk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P46892"	"Cyclin-dependent kinase 11B OS=Rattus norvegicus OX=10116 GN=Cdk11b PE=1 SV=1"	"P46892"	"Cyclin-dependent kinase 11B OS=Rattus norvegicus OX=10116 GN=Cdk11b PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"577.35327"	"1153.69927"	"1153.69813"	"0.98"	"0.00057"	"6/48"	"6"	"48"	"929463.370544434"	"HCD"	"MS2"	"0"	"74.7"	"100.000"	"30.6387"	"7477"	"7477"	"7454"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.0"	""	"91.6"	""	"82.5"	""	"120.4"	"0.4"	"162.6"	"162.0"	""	"288"	"32"	"31.000"	"24.000"	"0.00865690181975921"	"23"	"0.007147"	"0.08261"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGPPPEK"	"[R].aGPPPEk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P46892"	"Cyclin-dependent kinase 11B OS=Rattus norvegicus OX=10116 GN=Cdk11b PE=1 SV=1"	"P46892"	"Cyclin-dependent kinase 11B OS=Rattus norvegicus OX=10116 GN=Cdk11b PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"577.35370"	"1153.70012"	"1153.69813"	"1.73"	"0.00100"	"6/48"	"6"	"48"	"870070.41204834"	"HCD"	"MS2"	"0"	"73.1"	"100.000"	"30.6597"	"7474"	"7474"	"7450"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"97.3"	""	"88.8"	""	"94.8"	""	"126.4"	"1.4"	"140.3"	"144.5"	""	"288"	"31"	"31.000"	"24.000"	"0.0110500054468102"	"22"	"0.006958"	"0.08098"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQGAMYR"	"[K].iAQGAmYR.[G]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.81281"	"1154.61833"	"1154.61894"	"-0.53"	"-0.00031"	"6/68"	"6"	"68"	"12616735.5351563"	"HCD"	"MS2"	"42.54847"	"347.7"	"63.271"	"32.6554"	"8292"	"8292"	"8275"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"492.2"	""	"537.9"	""	"505.5"	""	"560.8"	""	"603.7"	"599.4"	""	"427"	"9"	"33.000"	"26.000"	"2.88003575433318"	"13"	"0.00736"	"0.08528"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVSQPQPGR"	"[K].gVSQPQPGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"577.82678"	"1154.64629"	"1154.64794"	"-1.43"	"-0.00082"	"10/74"	"10"	"74"	"19452596.7296753"	"HCD"	"MS2"	"0"	"790.4"	"100.000"	"22.8258"	"4317"	"4317"	"4294"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1054.0"	""	"1056.0"	""	"1069.5"	""	"1363.8"	""	"1420.3"	"1530.8"	""	"452"	"30"	"33.000"	"26.000"	"0.0243281138280343"	"21"	"0"	"0.001407"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVSQPQPGR"	"[K].gVSQPQPGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.82751"	"1154.64775"	"1154.64794"	"-0.16"	"-0.00009"	"6/74"	"6"	"74"	"5625428.87017822"	"HCD"	"MS2"	"0"	"275.1"	"100.000"	"23.1216"	"4438"	"4438"	"4421"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"315.4"	""	"317.9"	""	"339.9"	""	"593.2"	""	"502.4"	"543.7"	""	"447"	"23"	"33.000"	"26.000"	"0.107715332769216"	"14"	"0.0008629"	"0.01073"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVSQPQPGR"	"[K].gVSQPQPGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"577.82758"	"1154.64787"	"1154.64794"	"-0.05"	"-0.00003"	"10/74"	"10"	"74"	"19078467.3707275"	"HCD"	"MS2"	"0"	"769.6"	"100.000"	"22.8742"	"4320"	"4320"	"4297"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1015.8"	""	"1025.0"	""	"1062.9"	""	"1307.5"	""	"1411.0"	"1481.1"	""	"447"	"30"	"33.000"	"26.000"	"0.0242257665283739"	"19"	"0.0002479"	"0.00526"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVSQPQPGR"	"[K].gVSQPQPGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"577.82764"	"1154.64800"	"1154.64794"	"0.05"	"0.00003"	"6/74"	"6"	"74"	"4365119.57208252"	"HCD"	"MS2"	"0"	"210.4"	"100.000"	"23.1956"	"4451"	"4451"	"4431"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"247.8"	"3.2"	"249.8"	""	"257.9"	""	"448.4"	""	"374.1"	"417.3"	""	"447"	"25"	"33.000"	"26.000"	"0.0635737057514609"	"19"	"0.0006732"	"0.008493"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.5769"	"0.0000"	"1"	"1"	"1"	"385.56189"	"1154.67112"	"1154.67309"	"-1.71"	"-0.00066"	"8/74"	"8"	"74"	"2212149.21392822"	"HCD"	"MS2"	"52.13015"	"51.5"	"100.000"	"42.1231"	"12134"	"12134"	"12108"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"73.4"	""	"76.0"	""	"74.0"	""	"81.8"	""	"95.5"	"90.5"	""	"350"	"26"	"32.000"	"25.000"	"0.0460296898581692"	"25"	"0.0008629"	"0.009634"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"577.83936"	"1154.67143"	"1154.67309"	"-1.43"	"-0.00083"	"6/74"	"6"	"74"	"2125805.87426758"	"HCD"	"MS2"	"20.88042"	"94.4"	"100.000"	"43.3583"	"12628"	"12628"	"12602"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"133.9"	""	"121.0"	""	"108.4"	""	"177.9"	""	"152.6"	"202.1"	""	"350"	"27"	"32.000"	"25.000"	"0.0353214113644273"	"17"	"0"	"0.0005621"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"385.56216"	"1154.67194"	"1154.67309"	"-0.99"	"-0.00038"	"8/74"	"8"	"74"	"3034288.53521729"	"HCD"	"MS2"	"20.43447"	"52.3"	"100.000"	"42.3257"	"12206"	"12206"	"12187"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"69.2"	""	"72.8"	""	"76.0"	""	"87.3"	"1.2"	"92.3"	"97.0"	""	"348"	"27"	"32.000"	"25.000"	"0.0327001126123769"	""	"0.0003538"	"0.006668"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"577.83972"	"1154.67217"	"1154.67309"	"-0.80"	"-0.00046"	"7/74"	"7"	"74"	"8106479.51257324"	"HCD"	"MS2"	"5.05071"	"278.8"	"100.000"	"41.9553"	"12065"	"12065"	"12044"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"431.6"	""	"399.7"	""	"382.7"	""	"489.6"	""	"442.1"	"495.0"	""	"348"	"43"	"32.000"	"25.000"	"0.000846348537903143"	"24"	"0"	"0.0002135"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"577.83990"	"1154.67253"	"1154.67309"	"-0.48"	"-0.00028"	"7/74"	"7"	"74"	"4099649.96594238"	"HCD"	"MS2"	"2.300404"	"149.4"	"100.000"	"42.9948"	"12479"	"12479"	"12460"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"219.2"	""	"205.3"	""	"217.7"	""	"235.7"	""	"256.7"	"282.0"	""	"370"	"47"	"32.000"	"25.000"	"0.000379465003082729"	"23"	"0"	"0.0003409"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"577.83990"	"1154.67253"	"1154.67309"	"-0.48"	"-0.00028"	"7/74"	"7"	"74"	"11881900.6832275"	"HCD"	"MS2"	"11.38187"	"392.2"	"100.000"	"42.1122"	"12119"	"12119"	"12097"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"602.1"	""	"569.1"	""	"563.0"	""	"647.8"	""	"615.8"	"716.8"	""	"370"	"43"	"32.000"	"25.000"	"0.000899853330529204"	"23"	"0"	"0.0002288"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"577.83997"	"1154.67266"	"1154.67309"	"-0.38"	"-0.00022"	"7/74"	"7"	"74"	"18665394.5150146"	"HCD"	"MS2"	"1.830713"	"368.8"	"61.016"	"42.6037"	"12331"	"12331"	"12314"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"556.4"	""	"484.2"	""	"516.3"	""	"591.6"	""	"637.9"	"707.9"	""	"370"	"43"	"32.000"	"25.000"	"0.000891603425606485"	"24"	"0"	"0.0005993"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"577.84003"	"1154.67278"	"1154.67309"	"-0.27"	"-0.00016"	"7/74"	"7"	"74"	"3592559.57409668"	"HCD"	"MS2"	"1.810436"	"138.0"	"100.000"	"42.9119"	"12456"	"12456"	"12435"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"192.9"	""	"208.4"	""	"190.0"	""	"207.2"	"0.4"	"240.2"	"267.9"	""	"370"	"47"	"32.000"	"25.000"	"0.000379465003082729"	"23"	"0"	"0.0003358"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"577.84039"	"1154.67351"	"1154.67309"	"0.36"	"0.00021"	"6/74"	"6"	"74"	"2250394.53826904"	"HCD"	"MS2"	"21.34632"	"102.5"	"100.000"	"43.2268"	"12585"	"12585"	"12562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"155.0"	""	"132.7"	""	"122.1"	""	"195.2"	""	"171.2"	"196.0"	""	"367"	"23"	"32.000"	"25.000"	"0.0838756827943296"	"17"	"0"	"0.002337"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"577.84039"	"1154.67351"	"1154.67309"	"0.36"	"0.00021"	"7/74"	"7"	"74"	"29418191.4663086"	"HCD"	"MS2"	"1.551847"	"266.9"	"28.432"	"42.6891"	"12355"	"12355"	"12338"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"391.7"	""	"351.9"	""	"394.6"	""	"414.8"	""	"453.5"	"524.5"	""	"367"	"43"	"32.000"	"25.000"	"0.000892557222443831"	"22"	"0"	"0.0007749"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"577.84119"	"1154.67510"	"1154.67309"	"1.74"	"0.00100"	"7/74"	"7"	"74"	"367489127.636719"	"HCD"	"MS2"	"0.5316991"	"340.2"	"2.925"	"42.2956"	"12205"	"12205"	"12188"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"506.7"	""	"467.7"	""	"498.3"	""	"540.1"	""	"585.8"	"624.3"	""	"358"	"44"	"32.000"	"25.000"	"0.000638047528832978"	"24"	"0"	"0.001929"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"577.84155"	"1154.67583"	"1154.67309"	"2.37"	"0.00137"	"7/74"	"7"	"74"	"435493477.800781"	"HCD"	"MS2"	"0.5112684"	"385.1"	"2.917"	"42.3833"	"12230"	"12230"	"12217"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"589.1"	""	"544.6"	""	"539.7"	""	"616.6"	""	"640.2"	"716.5"	""	"361"	"43"	"32.000"	"25.000"	"0.000859957931183776"	"22"	"0"	"0.00122"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQAGDPVAR"	"[R].iQAGDPVAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNE2"	"DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Rattus norvegicus OX=10116 GN=Polr2e PE=2 SV=1"	"B0BNE2"	"DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Rattus norvegicus OX=10116 GN=Polr2e PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"578.33813"	"1155.66899"	"1155.66834"	"0.57"	"0.00033"	"7/78"	"7"	"78"	"1816814.29290771"	"HCD"	"MS2"	"25.71215"	"93.0"	"100.000"	"38.9031"	"10823"	"10823"	"10796"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"116.2"	""	"104.2"	""	"113.3"	""	"174.1"	""	"191.2"	"190.9"	""	"340"	"16"	"32.000"	"25.000"	"0.397602330572091"	"15"	"0.0006732"	"0.008206"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLDPSAPR"	"[R].aTLDPSAPR.[D]"	"N-Term(TMT6plex)"	"2"	"3"	"P00176; P33272"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1;Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1"	"P00176; P33272; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"578.82922"	"1156.65117"	"1156.65235"	"-1.02"	"-0.00059"	"7/72"	"7"	"72"	"19616935.0908203"	"HCD"	"MS2"	"0"	"310.8"	"46.233"	"37.5328"	"10263"	"10263"	"10254"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"446.8"	""	"401.4"	""	"415.0"	""	"456.6"	""	"557.8"	"672.6"	""	"439"	"44"	"33.000"	"26.000"	"0.000896261053000258"	"21"	"0"	"0.00083"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLDPSAPR"	"[R].aTLDPSAPR.[D]"	"N-Term(TMT6plex)"	"2"	"3"	"P00176; P33272"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1;Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1"	"P00176; P33272; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"578.82928"	"1156.65129"	"1156.65235"	"-0.92"	"-0.00053"	"7/72"	"7"	"72"	"15507071.5029297"	"HCD"	"MS2"	"0"	"460.8"	"94.245"	"37.3411"	"10191"	"10191"	"10183"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"674.4"	""	"613.2"	""	"625.0"	""	"689.8"	""	"793.8"	"974.9"	""	"435"	"44"	"33.000"	"26.000"	"0.000962629709888713"	"21"	"0"	"0.0007734"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLDPSAPR"	"[R].aTLDPSAPR.[D]"	"N-Term(TMT6plex)"	"2"	"3"	"P00176; P33272"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1;Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1"	"P00176; P33272; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"578.82977"	"1156.65227"	"1156.65235"	"-0.07"	"-0.00004"	"8/72"	"8"	"72"	"11726969.3516846"	"HCD"	"MS2"	"5.120223"	"403.5"	"100.000"	"37.0638"	"10078"	"10078"	"10059"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"576.2"	""	"567.2"	""	"529.3"	""	"580.7"	"2.5"	"705.8"	"862.8"	""	"449"	"42"	"33.000"	"26.000"	"0.00156753174715325"	"21"	"0"	"0.0008"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLDPSAPR"	"[R].aTLDPSAPR.[D]"	"N-Term(TMT6plex)"	"2"	"3"	"P00176; P33272"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1;Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1"	"P00176; P33272; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"578.83002"	"1156.65276"	"1156.65235"	"0.35"	"0.00020"	"7/72"	"7"	"72"	"13794404.5559082"	"HCD"	"MS2"	"1.004321"	"455.3"	"100.000"	"37.2714"	"10158"	"10158"	"10141"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"666.3"	""	"632.3"	""	"612.7"	""	"659.7"	""	"802.5"	"942.1"	""	"446"	"44"	"33.000"	"26.000"	"0.000929618725138848"	"21"	"0"	"0.000303"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMDPSCSR"	"[R].sMDPScSR.[S]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"Q6VBQ5"	"Myeloid-associated differentiation marker OS=Rattus norvegicus OX=10116 GN=Myadm PE=1 SV=1"	"Q6VBQ5"	"Myeloid-associated differentiation marker OS=Rattus norvegicus OX=10116 GN=Myadm PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"579.25037"	"1157.49346"	"1157.49507"	"-1.39"	"-0.00081"	"6/68"	"6"	"68"	"2368269.07653809"	"HCD"	"MS2"	"0"	"122.6"	"100.000"	"36.8932"	"10009"	"10009"	"9983"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"160.1"	""	"162.1"	""	"149.3"	""	"154.7"	"0.2"	"263.6"	"275.2"	""	"112"	"35"	"27.000"	"20.000"	"0.00167953101063309"	"15"	"0"	"0.002055"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMDPSCSR"	"[R].sMDPScSR.[S]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"Q6VBQ5"	"Myeloid-associated differentiation marker OS=Rattus norvegicus OX=10116 GN=Myadm PE=1 SV=1"	"Q6VBQ5"	"Myeloid-associated differentiation marker OS=Rattus norvegicus OX=10116 GN=Myadm PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"579.25128"	"1157.49529"	"1157.49507"	"0.19"	"0.00011"	"6/68"	"6"	"68"	"3323860.50024414"	"HCD"	"MS2"	"6.093953"	"159.2"	"100.000"	"37.1103"	"10092"	"10092"	"10064"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"197.0"	""	"208.0"	""	"202.3"	""	"187.0"	"0.0"	"356.4"	"363.1"	""	"114"	"27"	"27.000"	"20.000"	"0.0114518290318698"	"14"	"0"	"0.002971"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYTGEMGR"	"[K].vYTGEmGR.[L]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"579.29425"	"1157.58122"	"1157.58222"	"-0.86"	"-0.00050"	"5/60"	"5"	"60"	"3733361.38366699"	"HCD"	"MS2"	"25.78452"	"189.7"	"100.000"	"27.8661"	"6337"	"6337"	"6310"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"239.3"	""	"238.3"	""	"248.5"	""	"357.9"	""	"346.3"	"371.4"	""	"351"	"19"	"32.000"	"25.000"	"0.229761427486396"	"19"	"0.004942"	"0.05488"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYTGEMGR"	"[K].vYTGEmGR.[L]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"579.29456"	"1157.58183"	"1157.58222"	"-0.34"	"-0.00020"	"6/60"	"6"	"60"	"3420346.53442383"	"HCD"	"MS2"	"14.78316"	"162.2"	"100.000"	"27.8566"	"6348"	"6348"	"6321"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"191.9"	""	"204.7"	""	"220.8"	""	"289.7"	""	"323.2"	"312.3"	""	"348"	"22"	"32.000"	"25.000"	"0.113906694287706"	"15"	"0.004542"	"0.04911"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHGNSGMVR"	"[R].aHGNSGMVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"579.30554"	"1157.60381"	"1157.60469"	"-0.76"	"-0.00044"	"9/74"	"9"	"74"	"379027.922180176"	"HCD"	"MS2"	"9.927691"	"24.0"	"100.000"	"18.9133"	"2753"	"2753"	"2738"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.2"	""	"39.3"	""	"40.6"	""	"23.3"	""	"42.5"	"48.1"	""	"393"	"23"	"32.000"	"25.000"	"0.103600667769585"	"14"	"0.005921"	"0.06722"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHGNSGMVR"	"[R].aHGNSGMVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"386.53949"	"1157.60392"	"1157.60469"	"-0.67"	"-0.00026"	"9/74"	"9"	"74"	"589415.785827637"	"HCD"	"MS2"	"8.879008"	"26.5"	"100.000"	"18.9110"	"2752"	"2752"	"2738"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.9"	""	"30.3"	""	"39.0"	""	"38.7"	""	"60.3"	"52.9"	""	"393"	"20"	"32.000"	"25.000"	"0.186364228038626"	"16"	"0.0005778"	"0.008068"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHGNSGMVR"	"[R].aHGNSGMVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"386.53964"	"1157.60437"	"1157.60469"	"-0.27"	"-0.00011"	"7/74"	"7"	"74"	"687127.539123535"	"HCD"	"MS2"	"14.50395"	"28.2"	"100.000"	"18.9370"	"2759"	"2759"	"2743"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.1"	""	"32.6"	""	"32.7"	""	"41.3"	""	"57.0"	"68.3"	""	"431"	"35"	"33.000"	"26.000"	"0.00747217912725205"	"15"	"0"	"0.001034"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHGNSGMVR"	"[R].aHGNSGMVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"579.30585"	"1157.60442"	"1157.60469"	"-0.24"	"-0.00014"	"8/74"	"8"	"74"	"390094.282287598"	"HCD"	"MS2"	"6.938512"	"25.0"	"100.000"	"18.9393"	"2760"	"2760"	"2743"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.2"	""	"46.8"	""	"36.3"	""	"21.0"	"1.5"	"45.7"	"46.9"	""	"431"	"45"	"33.000"	"26.000"	"0.000646319522841838"	"15"	"0"	"0.001347"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLPVLTR"	"[R].eTLPVLTR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32Q05"	"Ubiquitin thioesterase OTU1 OS=Rattus norvegicus OX=10116 GN=Yod1 PE=2 SV=1"	"Q32Q05"	"Ubiquitin thioesterase OTU1 OS=Rattus norvegicus OX=10116 GN=Yod1 PE=2 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"579.35748"	"1157.70769"	"1157.70914"	"-1.25"	"-0.00073"	"5/68"	"5"	"68"	"500014.40802002"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"63.4849"	"20794"	"20794"	"20763"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.9"	""	"35.8"	""	"44.0"	""	"32.0"	"3.0"	"46.1"	"53.6"	""	"394"	"21"	"32.000"	"25.000"	"0.150822531561518"	"22"	"0.00413"	"0.04543"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMMEDFR"	"[R].tMMEDFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"579.77759"	"1158.54790"	"1158.54848"	"-0.50"	"-0.00029"	"5/56"	"5"	"56"	"1022528.78588867"	"HCD"	"MS2"	"12.63195"	"60.3"	"100.000"	"58.2384"	"18695"	"18695"	"18671"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.4"	""	"62.8"	""	"80.7"	""	"77.2"	""	"113.3"	"144.3"	""	"223"	"23"	"30.000"	"23.000"	"0.0513186079543212"	"18"	"0.0023"	"0.0236"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMMEDFR"	"[R].tMMEDFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"579.77802"	"1158.54875"	"1158.54848"	"0.23"	"0.00014"	"4/56"	"4"	"56"	"949437.476257324"	"HCD"	"MS2"	"35.56198"	"54.1"	"100.000"	"58.3969"	"18745"	"18745"	"18719"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"82.9"	""	"60.4"	""	"71.7"	""	"69.6"	"3.3"	"114.3"	"111.3"	""	"222"	"21"	"30.000"	"23.000"	"0.0879676476833323"	"18"	"0.0023"	"0.02322"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SASMQYSR"	"[K].sASMQYSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63072"	"ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 2 OS=Rattus norvegicus OX=10116 GN=Bst1 PE=2 SV=1"	"Q63072"	"ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 2 OS=Rattus norvegicus OX=10116 GN=Bst1 PE=2 SV=1"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"579.79211"	"1158.57695"	"1158.57747"	"-0.45"	"-0.00026"	"6/74"	"6"	"74"	"673711.814941406"	"HCD"	"MS2"	"0"	"43.9"	"100.000"	"26.9461"	"5963"	"5963"	"5937"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.1"	""	"35.2"	""	"53.5"	""	"71.4"	""	"97.4"	"118.6"	""	"323"	"30"	"32.000"	"25.000"	"0.0144268835622927"	"15"	"0.0001301"	"0.004137"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEYDAYR"	"[R].iEYDAYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"579.80280"	"1158.59831"	"1158.59925"	"-0.81"	"-0.00047"	"9/52"	"9"	"52"	"1570908.34954834"	"HCD"	"MS2"	"23.88799"	"84.8"	"100.000"	"52.0603"	"16177"	"16177"	"16158"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"114.9"	""	"93.0"	""	"128.7"	""	"139.8"	""	"171.6"	"162.3"	""	"356"	"16"	"32.000"	"25.000"	"0.438955002027713"	"21"	"0.004942"	"0.05348"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEYDAYR"	"[R].lEYDAYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"Q6AY65"	"Arfaptin-2 OS=Rattus norvegicus OX=10116 GN=Arfip2 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"579.80280"	"1158.59831"	"1158.59925"	"-0.81"	"-0.00047"	"9/52"	"9"	"52"	"1570908.34954834"	"HCD"	"MS2"	"23.88799"	"84.8"	"100.000"	"52.0603"	"16177"	"16177"	"16158"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"114.9"	""	"93.0"	""	"128.7"	""	"139.8"	""	"171.6"	"162.3"	""	"356"	"16"	"32.000"	"25.000"	"0.438955002027713"	"21"	"0.004942"	"0.05348"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEYDAYR"	"[R].iEYDAYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"579.80292"	"1158.59856"	"1158.59925"	"-0.60"	"-0.00035"	"5/52"	"5"	"52"	"1548842.1862793"	"HCD"	"MS2"	"13.8673"	"85.5"	"100.000"	"52.3622"	"16289"	"16289"	"16272"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"116.1"	""	"88.3"	""	"141.9"	""	"142.6"	"0.6"	"150.7"	"170.1"	""	"361"	"13"	"32.000"	"25.000"	"0.854038022425473"	"17"	"0.006308"	"0.07218"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEYDAYR"	"[R].lEYDAYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"Q6AY65"	"Arfaptin-2 OS=Rattus norvegicus OX=10116 GN=Arfip2 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"579.80292"	"1158.59856"	"1158.59925"	"-0.60"	"-0.00035"	"5/52"	"5"	"52"	"1548842.1862793"	"HCD"	"MS2"	"13.8673"	"85.5"	"100.000"	"52.3622"	"16289"	"16289"	"16272"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"116.1"	""	"88.3"	""	"141.9"	""	"142.6"	"0.6"	"150.7"	"170.1"	""	"361"	"13"	"32.000"	"25.000"	"0.854038022425473"	"17"	"0.006308"	"0.07218"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEYDAYR"	"[R].iEYDAYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"579.80292"	"1158.59856"	"1158.59925"	"-0.60"	"-0.00035"	"9/52"	"9"	"52"	"2698489.72906494"	"HCD"	"MS2"	"55.59225"	"133.5"	"100.000"	"52.0635"	"16167"	"16167"	"16147"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"178.7"	""	"167.0"	""	"173.5"	""	"214.9"	""	"270.2"	"265.0"	""	"361"	"11"	"32.000"	"25.000"	"1.57571331994054"	"18"	"0.007147"	"0.08244"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEYDAYR"	"[R].lEYDAYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"Q6AY65"	"Arfaptin-2 OS=Rattus norvegicus OX=10116 GN=Arfip2 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"579.80292"	"1158.59856"	"1158.59925"	"-0.60"	"-0.00035"	"9/52"	"9"	"52"	"2698489.72906494"	"HCD"	"MS2"	"55.59225"	"133.5"	"100.000"	"52.0635"	"16167"	"16167"	"16147"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"178.7"	""	"167.0"	""	"173.5"	""	"214.9"	""	"270.2"	"265.0"	""	"361"	"11"	"32.000"	"25.000"	"1.57571331994054"	"18"	"0.007147"	"0.08244"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEYDAYR"	"[R].iEYDAYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"579.80322"	"1158.59917"	"1158.59925"	"-0.07"	"-0.00004"	"9/52"	"9"	"52"	"2695100.24108887"	"HCD"	"MS2"	"53.1877"	"135.0"	"100.000"	"51.7634"	"16056"	"16056"	"16037"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"197.9"	""	"158.5"	""	"182.0"	""	"220.7"	""	"246.8"	"277.1"	""	"360"	"11"	"32.000"	"25.000"	"1.50755270782839"	"19"	"0.006685"	"0.07518"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEYDAYR"	"[R].lEYDAYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"Q6AY65"	"Arfaptin-2 OS=Rattus norvegicus OX=10116 GN=Arfip2 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"579.80322"	"1158.59917"	"1158.59925"	"-0.07"	"-0.00004"	"9/52"	"9"	"52"	"2695100.24108887"	"HCD"	"MS2"	"53.1877"	"135.0"	"100.000"	"51.7634"	"16056"	"16056"	"16037"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"197.9"	""	"158.5"	""	"182.0"	""	"220.7"	""	"246.8"	"277.1"	""	"360"	"11"	"32.000"	"25.000"	"1.50755270782839"	"19"	"0.006685"	"0.07518"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDGSPADR"	"[R].vIDGSPADR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK71"	"Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Magi3 PE=1 SV=2"	"Q9JK71"	"Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Magi3 PE=1 SV=2"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"579.81842"	"1158.62956"	"1158.63162"	"-1.77"	"-0.00103"	"7/74"	"7"	"74"	"1935969.14813232"	"HCD"	"MS2"	"0"	"98.4"	"100.000"	"35.1109"	"9285"	"9285"	"9258"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"117.8"	""	"116.2"	""	"104.6"	""	"187.9"	"0.5"	"198.1"	"209.2"	""	"551"	"36"	"34.000"	"27.000"	"0.00660878469189869"	""	"0"	"0.0018"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSAGDVER"	"[R].vPSAGDVER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3KRD5"	"Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus OX=10116 GN=Tomm34 PE=1 SV=1"	"Q3KRD5"	"Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus OX=10116 GN=Tomm34 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"579.81909"	"1158.63091"	"1158.63162"	"-0.61"	"-0.00036"	"5/74"	"5"	"74"	"1419449.93151855"	"HCD"	"MS2"	"22.65"	"67.6"	"100.000"	"38.1187"	"10503"	"10503"	"10475"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.7"	""	"80.7"	""	"75.3"	""	"130.1"	"3.6"	"144.0"	"117.1"	""	"541"	"11"	"34.000"	"27.000"	"2.32898809965934"	"17"	"0.001134"	"0.01384"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDGSPADR"	"[R].vIDGSPADR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK71"	"Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Magi3 PE=1 SV=2"	"Q9JK71"	"Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Magi3 PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"579.81934"	"1158.63140"	"1158.63162"	"-0.19"	"-0.00011"	"7/74"	"7"	"74"	"1851815.90808105"	"HCD"	"MS2"	"0"	"102.0"	"100.000"	"35.2228"	"9325"	"9325"	"9301"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"133.2"	""	"115.3"	""	"118.4"	""	"163.3"	""	"221.9"	"220.1"	""	"552"	"33"	"34.000"	"27.000"	"0.0147539763193564"	"23"	"0.001134"	"0.01375"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQVNQDGR"	"[K].lQVNQDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"579.82416"	"1158.64104"	"1158.64285"	"-1.56"	"-0.00091"	"6/68"	"6"	"68"	"1042888.96026611"	"HCD"	"MS2"	"0"	"59.4"	"100.000"	"31.5644"	"7850"	"7850"	"7820"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"100.5"	""	"64.1"	""	"78.5"	""	"92.1"	"3.7"	"109.2"	"114.3"	""	"578"	"27"	"34.000"	"27.000"	"0.0539383730651219"	"21"	"0.0008629"	"0.009501"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQVNQDGR"	"[K].lQVNQDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"579.82458"	"1158.64189"	"1158.64285"	"-0.83"	"-0.00048"	"6/68"	"6"	"68"	"1017157.12158203"	"HCD"	"MS2"	"13.90432"	"59.0"	"100.000"	"31.5812"	"7847"	"7847"	"7821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"92.4"	""	"83.2"	""	"69.5"	""	"87.2"	"2.5"	"103.2"	"121.5"	""	"571"	"27"	"34.000"	"27.000"	"0.0611795266619777"	"27"	"0.001546"	"0.01892"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIAQLAR"	"[R].eEIAQLAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R0C9"	"Sigma non-opioid intracellular receptor 1 OS=Rattus norvegicus OX=10116 GN=Sigmar1 PE=1 SV=1"	"Q9R0C9"	"Sigma non-opioid intracellular receptor 1 OS=Rattus norvegicus OX=10116 GN=Sigmar1 PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"579.83777"	"1158.66826"	"1158.66800"	"0.22"	"0.00013"	"10/64"	"10"	"64"	"2141946.76263428"	"HCD"	"MS2"	"20.57373"	"112.0"	"100.000"	"51.8933"	"16098"	"16098"	"16075"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"127.4"	""	"130.0"	""	"150.9"	""	"186.6"	""	"240.5"	"237.2"	""	"625"	"18"	"34.000"	"27.000"	"0.50332676099321"	"25"	"0.002547"	"0.02535"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIAQLAR"	"[R].eEIAQLAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R0C9"	"Sigma non-opioid intracellular receptor 1 OS=Rattus norvegicus OX=10116 GN=Sigmar1 PE=1 SV=1"	"Q9R0C9"	"Sigma non-opioid intracellular receptor 1 OS=Rattus norvegicus OX=10116 GN=Sigmar1 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"579.83807"	"1158.66887"	"1158.66800"	"0.75"	"0.00043"	"5/64"	"5"	"64"	"2207495.41430664"	"HCD"	"MS2"	"17.65625"	"110.4"	"100.000"	"51.5335"	"15962"	"15962"	"15941"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"121.1"	""	"124.3"	""	"146.7"	""	"193.6"	""	"226.9"	"239.4"	""	"623"	"18"	"34.000"	"27.000"	"0.485800604630596"	"20"	"0.002056"	"0.02253"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVDELNR"	"[K].aLVDELNR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ79"	"Cytoplasmic dynein 2 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync2h1 PE=1 SV=1"	"Q9JJ79"	"Cytoplasmic dynein 2 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync2h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"579.83820"	"1158.66911"	"1158.66800"	"0.96"	"0.00056"	"6/60"	"6"	"60"	"474925.069274902"	"HCD"	"MS2"	"17.74816"	"30.9"	"100.000"	"59.2445"	"19106"	"19106"	"19085"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.1"	""	"36.5"	""	"41.1"	""	"54.1"	""	"60.9"	"51.6"	""	"623"	"20"	"34.000"	"27.000"	"0.323190101527311"	"15"	"0.002937"	"0.02798"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGEELIGR"	"[R].rGEELIGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"1"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"386.89713"	"1158.67682"	"1158.67924"	"-2.08"	"-0.00080"	"7/72"	"7"	"72"	"3397468.47540283"	"HCD"	"MS2"	"18.34921"	"109.0"	"100.000"	"27.0304"	"6013"	"6013"	"5991"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"144.7"	""	"140.4"	""	"145.5"	""	"171.3"	"2.3"	"209.1"	"220.1"	""	"609"	"40"	"34.000"	"27.000"	"0.00340868835515748"	"21"	"0.0008629"	"0.01046"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIAELER"	"[R].eAIAELER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5870"	"0.0000"	"1"	"1"	"1"	"580.32892"	"1159.65056"	"1159.65202"	"-1.26"	"-0.00073"	"6/68"	"6"	"68"	"1630883.71948242"	"HCD"	"MS2"	"8.044275"	"79.5"	"100.000"	"53.3633"	"16698"	"16698"	"16674"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"120.2"	""	"96.3"	""	"105.4"	""	"120.1"	"3.6"	"139.7"	"168.1"	""	"687"	"46"	"35.000"	"28.000"	"0.000893154809947271"	""	"0"	"0.00191"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIAELER"	"[R].eAIAELER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"580.32910"	"1159.65093"	"1159.65202"	"-0.94"	"-0.00055"	"6/68"	"6"	"68"	"1702442.18408203"	"HCD"	"MS2"	"7.807846"	"85.1"	"100.000"	"53.1001"	"16602"	"16602"	"16577"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"132.1"	""	"105.0"	""	"111.4"	""	"124.1"	"5.3"	"154.3"	"174.4"	""	"676"	"46"	"35.000"	"28.000"	"0.000889030581260639"	""	"0"	"0.00148"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLQQSIAR"	"[K].dLQQSIAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.3214"	"0.0000"	"1"	"1"	"1"	"580.33466"	"1159.66203"	"1159.66325"	"-1.05"	"-0.00061"	"7/74"	"7"	"74"	"2269783.29333496"	"HCD"	"MS2"	"15.81875"	"120.9"	"100.000"	"39.3952"	"11023"	"11023"	"11007"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"187.8"	""	"137.6"	""	"146.3"	""	"207.7"	"8.3"	"226.8"	"231.6"	""	"702"	"28"	"35.000"	"28.000"	"0.0522765738276531"	""	"0.0008629"	"0.009645"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGVQIAGR"	"[K].eTGVQIAGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"580.33502"	"1159.66277"	"1159.66325"	"-0.42"	"-0.00024"	"6/74"	"6"	"74"	"3699080.15270996"	"HCD"	"MS2"	"23.50078"	"186.4"	"100.000"	"34.4743"	"9027"	"9027"	"8999"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"303.7"	""	"226.1"	""	"256.4"	""	"264.2"	"2.2"	"360.2"	"353.6"	""	"713"	"40"	"35.000"	"28.000"	"0.00369878880239121"	""	"0"	"0.0008574"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLQQSIAR"	"[K].dLQQSIAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.1852"	"0.0000"	"1"	"1"	"1"	"580.33521"	"1159.66313"	"1159.66325"	"-0.10"	"-0.00006"	"7/74"	"7"	"74"	"2488241.70275879"	"HCD"	"MS2"	"11.81455"	"135.4"	"100.000"	"39.5803"	"11089"	"11089"	"11070"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"201.7"	""	"162.4"	""	"159.8"	""	"226.0"	""	"260.7"	"274.7"	""	"713"	"27"	"35.000"	"28.000"	"0.0716241587695012"	""	"0.0008629"	"0.009504"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGVQIAGR"	"[K].eTGVQIAGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"580.33533"	"1159.66338"	"1159.66325"	"0.11"	"0.00006"	"6/74"	"6"	"74"	"2620384.90863037"	"HCD"	"MS2"	"24.18104"	"140.5"	"100.000"	"34.5148"	"9037"	"9037"	"9012"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"216.7"	""	"176.3"	""	"200.1"	""	"201.6"	""	"272.0"	"266.3"	""	"713"	"40"	"35.000"	"28.000"	"0.00387310734819484"	""	"0"	"0.0006603"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSSFMSR"	"[K].sNSSFmSR.[E]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"580.78168"	"1160.55608"	"1160.55674"	"-0.57"	"-0.00033"	"5/80"	"5"	"80"	"1035199.94451904"	"HCD"	"MS2"	"16.52536"	"55.7"	"100.000"	"22.2660"	"4089"	"4089"	"4065"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"73.1"	""	"57.4"	""	"83.2"	""	"113.1"	"1.2"	"105.6"	"94.5"	""	"245"	"20"	"30.000"	"23.000"	"0.11485134584842"	"14"	"0.004817"	"0.0508"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSSFMSR"	"[K].sNSSFmSR.[E]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"580.78204"	"1160.55681"	"1160.55674"	"0.06"	"0.00004"	"7/80"	"7"	"80"	"1192811.22662354"	"HCD"	"MS2"	"19.57471"	"61.4"	"100.000"	"22.3372"	"4101"	"4101"	"4072"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"81.0"	""	"68.2"	""	"72.0"	""	"126.8"	"1.0"	"111.3"	"122.2"	""	"283"	"20"	"31.000"	"24.000"	"0.130844791612259"	"18"	"0.00447"	"0.04682"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQLEINGR"	"[K].tQLEInGR.[N]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"F2Z3T4"	"Muscleblind-like protein 2 OS=Rattus norvegicus OX=10116 GN=Mbnl2 PE=1 SV=1"	"F2Z3T4"	"Muscleblind-like protein 2 OS=Rattus norvegicus OX=10116 GN=Mbnl2 PE=1 SV=1"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"580.82635"	"1160.64543"	"1160.64727"	"-1.58"	"-0.00092"	"5/74"	"5"	"74"	"1529037.894104"	"HCD"	"MS2"	"30.28498"	"92.1"	"100.000"	"45.0657"	"13327"	"13327"	"13303"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"134.8"	""	"99.9"	""	"100.3"	""	"175.5"	""	"184.6"	"185.6"	""	"776"	"38"	"35.000"	"28.000"	"0.00688385518585384"	"27"	"0.0002479"	"0.005232"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDDVVNTR"	"[K].iDDVVNTR.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"580.82739"	"1160.64751"	"1160.64727"	"0.21"	"0.00012"	"9/70"	"9"	"70"	"1356577.3536377"	"HCD"	"MS2"	"0"	"70.1"	"100.000"	"50.5915"	"15578"	"15578"	"15558"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.2"	""	"75.7"	""	"82.5"	""	"122.1"	"1.8"	"150.2"	"138.5"	""	"801"	"27"	"36.000"	"29.000"	"0.0723773237467376"	"27"	"0.0003538"	"0.006737"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDDVVNTR"	"[K].iDDVVNTR.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"580.82739"	"1160.64751"	"1160.64727"	"0.21"	"0.00012"	"6/70"	"6"	"70"	"3012818.57757568"	"HCD"	"MS2"	"0"	"136.2"	"100.000"	"50.6571"	"15594"	"15594"	"15582"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"198.6"	""	"145.1"	""	"136.2"	""	"252.7"	""	"292.0"	"270.2"	""	"801"	"38"	"36.000"	"29.000"	"0.00592382909461367"	"22"	"0.0001301"	"0.003965"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQLEINGR"	"[K].tQLEInGR.[N]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"F2Z3T4"	"Muscleblind-like protein 2 OS=Rattus norvegicus OX=10116 GN=Mbnl2 PE=1 SV=1"	"F2Z3T4"	"Muscleblind-like protein 2 OS=Rattus norvegicus OX=10116 GN=Mbnl2 PE=1 SV=1"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"580.82770"	"1160.64812"	"1160.64727"	"0.73"	"0.00043"	"5/74"	"5"	"74"	"1465073.15112305"	"HCD"	"MS2"	"26.77483"	"86.9"	"100.000"	"45.2178"	"13378"	"13378"	"13355"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"129.6"	""	"91.9"	""	"100.0"	""	"153.0"	"3.7"	"181.8"	"164.3"	""	"806"	"33"	"36.000"	"29.000"	"0.0183782877128373"	"26"	"0.0003538"	"0.006757"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDDVVNTR"	"[K].iDDVVNTR.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"580.82800"	"1160.64873"	"1160.64727"	"1.26"	"0.00073"	"6/70"	"6"	"70"	"2874089.36120605"	"HCD"	"MS2"	"5.925285"	"124.3"	"100.000"	"50.2928"	"15457"	"15457"	"15438"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"167.9"	""	"133.1"	""	"130.8"	""	"232.6"	""	"268.0"	"248.0"	""	"806"	"42"	"36.000"	"29.000"	"0.00236213680299154"	"22"	"0.0001301"	"0.003955"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNDVAIVK"	"[-].mNDVAIVk.[E]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"P47196"	"RAC-alpha serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Akt1 PE=1 SV=1"	"P47196"	"RAC-alpha serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Akt1 PE=1 SV=1"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"580.83008"	"1160.65288"	"1160.65466"	"-1.54"	"-0.00089"	"5/68"	"5"	"68"	"306962.29675293"	"HCD"	"MS2"	"52.41356"	"13.7"	"100.000"	"88.4115"	"30803"	"30803"	"30789"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.0"	""	"16.0"	""	"18.6"	""	"21.6"	""	"28.7"	"25.4"	""	"861"	"32"	"36.000"	"29.000"	"0.0297833232980602"	"25"	"0.0003538"	"0.007261"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNDVAIVK"	"[-].mNDVAIVk.[E]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"P47196"	"RAC-alpha serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Akt1 PE=1 SV=1"	"P47196"	"RAC-alpha serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Akt1 PE=1 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"580.83063"	"1160.65398"	"1160.65466"	"-0.59"	"-0.00034"	"5/68"	"5"	"68"	"253402.748046875"	"HCD"	"MS2"	"47.75672"	"11.0"	"100.000"	"88.4292"	"30813"	"30813"	"30802"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.3"	""	"16.3"	""	"16.7"	""	"12.9"	""	"20.3"	"18.3"	""	"875"	"29"	"36.000"	"29.000"	"0.0506965093317868"	"26"	"0.0003538"	"0.006777"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQNGTSGVR"	"[K].iQNGTSGVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"580.83270"	"1160.65813"	"1160.65850"	"-0.32"	"-0.00019"	"8/80"	"8"	"80"	"1132851.95007324"	"HCD"	"MS2"	"0"	"76.3"	"100.000"	"26.0855"	"5615"	"5615"	"5595"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"106.7"	""	"109.6"	""	"99.6"	""	"120.8"	"3.3"	"139.3"	"144.0"	""	"849"	"27"	"36.000"	"29.000"	"0.0870718344911452"	"19"	"0.000936"	"0.01338"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEQAIK"	"[K].gGEQAIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63036"	"DnaJ homolog subfamily A member 1 OS=Rattus norvegicus OX=10116 GN=Dnaja1 PE=1 SV=1"	"P63036"	"DnaJ homolog subfamily A member 1 OS=Rattus norvegicus OX=10116 GN=Dnaja1 PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"580.85553"	"1160.70378"	"1160.70394"	"-0.14"	"-0.00008"	"6/54"	"6"	"54"	"2457134.39556885"	"HCD"	"MS2"	"0"	"192.7"	"100.000"	"30.5952"	"7459"	"7459"	"7442"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"256.3"	""	"203.3"	""	"219.3"	""	"384.7"	""	"354.8"	"410.8"	""	"676"	"31"	"35.000"	"28.000"	"0.0274736714463465"	"24"	"0.003967"	"0.04133"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEQAIK"	"[K].gGEQAIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63036"	"DnaJ homolog subfamily A member 1 OS=Rattus norvegicus OX=10116 GN=Dnaja1 PE=1 SV=1"	"P63036"	"DnaJ homolog subfamily A member 1 OS=Rattus norvegicus OX=10116 GN=Dnaja1 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"580.85559"	"1160.70391"	"1160.70394"	"-0.03"	"-0.00002"	"6/54"	"6"	"54"	"2268792.39379883"	"HCD"	"MS2"	"0"	"167.0"	"100.000"	"30.6370"	"7464"	"7464"	"7450"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"221.0"	""	"177.2"	""	"197.1"	""	"319.2"	""	"322.5"	"350.1"	""	"676"	"34"	"35.000"	"28.000"	"0.0149939721648824"	"24"	"0.003111"	"0.03111"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAATLSFGPER"	"[M].aAATLSFGPER.[E]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"581.29810"	"1161.58891"	"1161.58986"	"-0.82"	"-0.00047"	"7/92"	"7"	"92"	"309618.904907227"	"HCD"	"MS2"	"8.574218"	"9.2"	"100.000"	"80.8969"	"27844"	"27844"	"27827"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.5"	""	"10.0"	""	"14.2"	""	"15.2"	""	"16.6"	"20.8"	"NoQuanLabels"	"499"	"58"	"33.000"	"26.000"	"4.40626436261197E-05"	"24"	"0"	"0.0002622"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAATLSFGPER"	"[M].aAATLSFGPER.[E]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"581.29840"	"1161.58953"	"1161.58986"	"-0.29"	"-0.00017"	"7/92"	"7"	"92"	"335423.13684082"	"HCD"	"MS2"	"17.91394"	"9.1"	"100.000"	"80.9230"	"27855"	"27855"	"27839"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.7"	""	"11.6"	""	"12.2"	""	"10.2"	""	"20.7"	"18.8"	"NoQuanLabels"	"502"	"52"	"33.000"	"27.000"	"0.000154409395050177"	"24"	"0"	"0.001336"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVYSEAAR"	"[K].hVYSEAAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIG6"	"N-acetylgalactosamine kinase OS=Rattus norvegicus OX=10116 GN=Galk2 PE=2 SV=1"	"Q5XIG6"	"N-acetylgalactosamine kinase OS=Rattus norvegicus OX=10116 GN=Galk2 PE=2 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"581.31427"	"1161.62126"	"1161.62139"	"-0.11"	"-0.00006"	"5/58"	"5"	"58"	"973498.342102051"	"HCD"	"MS2"	"34.02869"	"62.5"	"100.000"	"20.5396"	"3390"	"3390"	"3366"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.5"	""	"72.5"	""	"89.9"	""	"91.4"	""	"110.9"	"117.4"	""	"860"	"21"	"36.000"	"29.000"	"0.324689657896137"	"19"	"0.0002479"	"0.006055"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVYSEAAR"	"[K].hVYSEAAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIG6"	"N-acetylgalactosamine kinase OS=Rattus norvegicus OX=10116 GN=Galk2 PE=2 SV=1"	"Q5XIG6"	"N-acetylgalactosamine kinase OS=Rattus norvegicus OX=10116 GN=Galk2 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"581.31427"	"1161.62126"	"1161.62139"	"-0.11"	"-0.00006"	"5/58"	"5"	"58"	"1048838.36999512"	"HCD"	"MS2"	"0"	"62.0"	"100.000"	"20.5797"	"3393"	"3393"	"3370"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.0"	""	"75.8"	""	"86.7"	""	"99.8"	""	"104.0"	"117.0"	""	"860"	"24"	"36.000"	"29.000"	"0.17237268857974"	"22"	"0.004069"	"0.04402"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEGEESR"	"[K].lLEGEESR.[IL]"	"N-Term(TMT6plex)"	"4"	"5"	"P48675; P31000; Q6IG12; Q10758"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2;Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1;Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"P21807; P48675; P31000; Q6IG12; Q10758"	"Peripherin OS=Rattus norvegicus OX=10116 GN=Prph PE=1 SV=1; Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2; Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"581.31824"	"1161.62920"	"1161.63128"	"-1.80"	"-0.00104"	"6/64"	"6"	"64"	"4094666.61437988"	"HCD"	"MS2"	"9.793545"	"195.3"	"100.000"	"41.1254"	"11727"	"11727"	"11709"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"307.4"	""	"281.4"	""	"288.4"	""	"258.3"	""	"331.4"	"382.7"	""	"894"	"33"	"36.000"	"29.000"	"0.0228195734989006"	""	"0.000936"	"0.01168"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEGEESR"	"[K].lLEGEESR.[IL]"	"N-Term(TMT6plex)"	"4"	"5"	"P48675; P31000; Q6IG12; Q10758"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2;Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1;Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"P21807; P48675; P31000; Q6IG12; Q10758"	"Peripherin OS=Rattus norvegicus OX=10116 GN=Prph PE=1 SV=1; Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2; Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.0882"	"0.0000"	"1"	"1"	"1"	"581.31879"	"1161.63030"	"1161.63128"	"-0.85"	"-0.00049"	"5/64"	"5"	"64"	"15722976.8800049"	"HCD"	"MS2"	"0"	"443.2"	"70.382"	"41.4215"	"11847"	"11847"	"11828"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"664.6"	""	"608.0"	""	"680.6"	""	"599.8"	""	"747.5"	"901.6"	""	"849"	"34"	"36.000"	"29.000"	"0.0158809944721486"	""	"0.0006732"	"0.008685"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEGEESR"	"[K].lLEGEESR.[IL]"	"N-Term(TMT6plex)"	"4"	"5"	"P48675; P31000; Q6IG12; Q10758"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2;Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1;Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"P21807; P48675; P31000; Q6IG12; Q10758"	"Peripherin OS=Rattus norvegicus OX=10116 GN=Prph PE=1 SV=1; Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2; Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"581.31885"	"1161.63042"	"1161.63128"	"-0.74"	"-0.00043"	"6/64"	"6"	"64"	"4130628.45916748"	"HCD"	"MS2"	"0"	"199.7"	"100.000"	"41.2777"	"11779"	"11779"	"11763"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"301.8"	""	"286.4"	""	"277.7"	""	"311.5"	""	"332.7"	"382.9"	""	"849"	"33"	"36.000"	"29.000"	"0.0223294329582855"	""	"0.0008629"	"0.01056"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEGEESR"	"[K].lLEGEESR.[IL]"	"N-Term(TMT6plex)"	"4"	"5"	"P48675; P31000; Q6IG12; Q10758"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2;Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1;Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"P21807; P48675; P31000; Q6IG12; Q10758"	"Peripherin OS=Rattus norvegicus OX=10116 GN=Prph PE=1 SV=1; Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2; Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.0882"	"0.0000"	"1"	"1"	"1"	"581.31903"	"1161.63078"	"1161.63128"	"-0.43"	"-0.00025"	"5/64"	"5"	"64"	"16626970.3778076"	"HCD"	"MS2"	"0"	"378.3"	"55.123"	"41.5693"	"11898"	"11898"	"11881"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"594.0"	""	"532.4"	""	"535.3"	""	"514.7"	"1.2"	"629.2"	"774.9"	""	"893"	"34"	"36.000"	"29.000"	"0.0166272896842665"	""	"0.000936"	"0.012"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQNGTSGVR"	"[K].iQnGTSGVR.[F]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"2"	"2"	"0.3250"	"0.0000"	"1"	"1"	"1"	"581.32330"	"1161.63933"	"1161.64252"	"-2.74"	"-0.00159"	"7/80"	"7"	"80"	"2451445.46472168"	"HCD"	"MS2"	"0"	"138.1"	"100.000"	"30.8612"	"7565"	"7565"	"7547"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"208.1"	""	"152.3"	""	"165.9"	""	"228.2"	"3.3"	"275.7"	"276.8"	""	"893"	"40"	"36.000"	"29.000"	"0.0041958645816711"	"28"	"0"	"0.003725"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQNGTSGVR"	"[K].iQnGTSGVR.[F]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"2"	"2"	"0.3023"	"0.0000"	"1"	"1"	"1"	"581.32422"	"1161.64116"	"1161.64252"	"-1.17"	"-0.00068"	"7/80"	"7"	"80"	"2043005.45611572"	"HCD"	"MS2"	"0"	"78.0"	"100.000"	"30.8799"	"7561"	"7561"	"7544"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"114.8"	""	"90.8"	""	"92.0"	""	"132.7"	"1.9"	"153.7"	"153.9"	""	"895"	"43"	"36.000"	"29.000"	"0.00206915507076169"	"29"	"0"	"0.0004781"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASALGSDGVR"	"[R].aSALGSDGVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"581.32471"	"1161.64214"	"1161.64252"	"-0.33"	"-0.00019"	"8/82"	"8"	"82"	"10293968.6383057"	"HCD"	"MS2"	"4.422866"	"440.1"	"100.000"	"33.4983"	"8634"	"8634"	"8617"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"570.3"	""	"634.8"	""	"626.3"	""	"569.9"	""	"818.3"	"959.4"	""	"881"	"66"	"36.000"	"29.000"	"1.02788827643478E-05"	"28"	"0"	"4.556E-05"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQNGTSGVR"	"[K].iQnGTSGVR.[F]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"581.32489"	"1161.64250"	"1161.64252"	"-0.01"	"-0.00001"	"7/80"	"7"	"80"	"1554928.58721924"	"HCD"	"MS2"	"23.89228"	"110.0"	"100.000"	"31.1878"	"7686"	"7686"	"7663"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"181.9"	""	"133.3"	""	"133.3"	""	"193.0"	"3.2"	"183.5"	"213.3"	""	"881"	"33"	"36.000"	"29.000"	"0.0240960531654795"	"23"	"0"	"0.003686"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASALGSDGVR"	"[R].aSALGSDGVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"581.32501"	"1161.64275"	"1161.64252"	"0.20"	"0.00012"	"8/82"	"8"	"82"	"9578266.12695313"	"HCD"	"MS2"	"3.501378"	"414.2"	"100.000"	"33.5099"	"8632"	"8632"	"8620"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"534.3"	""	"622.8"	""	"578.6"	""	"544.6"	""	"759.0"	"892.0"	""	"882"	"66"	"36.000"	"29.000"	"1.04577580419679E-05"	"28"	"0"	"3.794E-05"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTDDPAK"	"[R].gTDDPAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"581.32916"	"1161.65105"	"1161.65157"	"-0.45"	"-0.00026"	"10/52"	"10"	"52"	"20138466.8765869"	"HCD"	"MS2"	"0"	"1031.0"	"72.640"	"25.7667"	"5485"	"5485"	"5467"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1704.7"	""	"1527.8"	""	"1292.7"	""	"1212.9"	""	"2154.9"	"1890.0"	""	"910"	"29"	"36.000"	"29.000"	"0.0549555294973585"	"28"	"0.006639"	"0.07407"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTDDPAK"	"[R].gTDDPAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.5517"	"0.0000"	"1"	"1"	"1"	"581.32959"	"1161.65190"	"1161.65157"	"0.28"	"0.00016"	"10/52"	"10"	"52"	"21146732.6972046"	"HCD"	"MS2"	"0.1818177"	"1068.8"	"79.913"	"25.6860"	"5467"	"5467"	"5450"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1774.0"	""	"1583.1"	""	"1359.3"	""	"1188.9"	""	"2272.4"	"1959.3"	""	"918"	"29"	"36.000"	"29.000"	"0.05257904401235"	"27"	"0.005921"	"0.06807"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAAANDK"	"[K].nAAANDk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"581.33466"	"1161.66203"	"1161.66281"	"-0.66"	"-0.00039"	"6/60"	"6"	"60"	"4936690.16479492"	"HCD"	"MS2"	"0"	"384.4"	"100.000"	"21.5825"	"3813"	"3813"	"3790"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"539.4"	""	"495.7"	""	"497.5"	""	"677.7"	""	"725.3"	"710.0"	""	"737"	"35"	"35.000"	"28.000"	"0.011077391175185"	"24"	"0.003922"	"0.04073"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAAANDK"	"[K].nAAANDk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"581.33514"	"1161.66301"	"1161.66281"	"0.18"	"0.00010"	"6/60"	"6"	"60"	"8732712.8369751"	"HCD"	"MS2"	"0"	"663.7"	"100.000"	"21.6813"	"3835"	"3835"	"3818"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"923.0"	""	"783.8"	""	"859.3"	""	"1156.3"	""	"1322.0"	"1259.7"	""	"737"	"32"	"35.000"	"28.000"	"0.0226171298903227"	"22"	"0.00447"	"0.04797"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTVVETIR"	"[K].dTVVETIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IE52"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"Q6IE52"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"581.33771"	"1161.66814"	"1161.66767"	"0.40"	"0.00023"	"6/66"	"6"	"66"	"1979506.48406982"	"HCD"	"MS2"	"14.52338"	"114.7"	"100.000"	"45.5949"	"13543"	"13543"	"13518"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"190.9"	""	"189.8"	""	"139.2"	""	"169.9"	""	"210.7"	"185.7"	""	"690"	"36"	"35.000"	"28.000"	"0.00935016113002339"	"28"	"0.0001301"	"0.00425"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTVVETIR"	"[K].dTVVETIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IE52"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"Q6IE52"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"581.33783"	"1161.66838"	"1161.66767"	"0.61"	"0.00036"	"6/66"	"6"	"66"	"1258461.71276855"	"HCD"	"MS2"	"34.10023"	"82.4"	"100.000"	"45.6777"	"13565"	"13565"	"13541"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"123.9"	""	"134.1"	""	"106.8"	""	"126.6"	""	"165.3"	"128.7"	""	"690"	"30"	"35.000"	"28.000"	"0.0358772457211025"	"26"	"0.0003538"	"0.006505"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENISEWR"	"[R].eNISEWR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P60892"	"Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus OX=10116 GN=Prps1 PE=1 SV=2"	"P60892"	"Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus OX=10116 GN=Prps1 PE=1 SV=2"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"581.80627"	"1162.60527"	"1162.60540"	"-0.11"	"-0.00007"	"4/66"	"4"	"66"	"2492294.72784424"	"HCD"	"MS2"	"27.48115"	"117.1"	"100.000"	"49.4060"	"15096"	"15096"	"15079"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"192.1"	""	"142.9"	""	"142.6"	""	"228.4"	""	"205.4"	"204.5"	""	"708"	"19"	"35.000"	"28.000"	"0.415913734448593"	"26"	"0.007686"	"0.09454"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLMPDGTSR"	"[K].gLMPDGTSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"581.80792"	"1162.60857"	"1162.60877"	"-0.18"	"-0.00010"	"6/70"	"6"	"70"	"3752614.65008545"	"HCD"	"MS2"	"12.03116"	"207.1"	"100.000"	"40.6394"	"11521"	"11521"	"11503"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"355.9"	""	"288.3"	""	"304.0"	""	"252.8"	""	"371.7"	"390.1"	""	"714"	"35"	"35.000"	"28.000"	"0.0101547261535891"	"22"	"0"	"0.0006803"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLMPDGTSR"	"[K].gLMPDGTSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"581.80811"	"1162.60893"	"1162.60877"	"0.14"	"0.00008"	"6/70"	"6"	"70"	"5253022.31964111"	"HCD"	"MS2"	"18.34269"	"291.8"	"100.000"	"40.9524"	"11648"	"11648"	"11630"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"444.8"	""	"371.5"	""	"439.4"	""	"389.4"	""	"544.6"	"577.2"	""	"715"	"35"	"35.000"	"28.000"	"0.0105020975057625"	"23"	"0"	"0.0007293"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLMPDGTSR"	"[K].gLMPDGTSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"581.80817"	"1162.60906"	"1162.60877"	"0.24"	"0.00014"	"6/70"	"6"	"70"	"4378281.42974854"	"HCD"	"MS2"	"15.01528"	"234.4"	"100.000"	"40.4802"	"11466"	"11466"	"11445"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"378.9"	""	"311.0"	""	"342.7"	""	"311.8"	""	"431.3"	"445.1"	""	"719"	"39"	"35.000"	"28.000"	"0.00475005780490074"	"23"	"0"	"0.002189"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSTDGSPTR"	"[R].lSTDGSPTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P14272"	"Plasma kallikrein OS=Rattus norvegicus OX=10116 GN=Klkb1 PE=1 SV=1"	"P14272"	"Plasma kallikrein OS=Rattus norvegicus OX=10116 GN=Klkb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"581.81677"	"1162.62627"	"1162.62653"	"-0.23"	"-0.00013"	"8/76"	"8"	"76"	"5364370.34625244"	"HCD"	"MS2"	"0"	"229.7"	"100.000"	"29.3234"	"6943"	"6943"	"6924"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"345.3"	""	"404.8"	""	"241.3"	""	"378.4"	"1.7"	"415.3"	"387.9"	""	"764"	"30"	"35.000"	"28.000"	"0.034758687014552"	"25"	"0"	"0.001133"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSTDGSPTR"	"[R].lSTDGSPTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P14272"	"Plasma kallikrein OS=Rattus norvegicus OX=10116 GN=Klkb1 PE=1 SV=1"	"P14272"	"Plasma kallikrein OS=Rattus norvegicus OX=10116 GN=Klkb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"581.81702"	"1162.62676"	"1162.62653"	"0.19"	"0.00011"	"8/76"	"8"	"76"	"5520144.27947998"	"HCD"	"MS2"	"0"	"239.1"	"100.000"	"29.3446"	"6939"	"6939"	"6923"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"366.6"	""	"433.9"	""	"239.4"	""	"421.5"	"7.8"	"405.8"	"387.9"	""	"768"	"32"	"35.000"	"28.000"	"0.0246224477408702"	"28"	"0"	"0.001031"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SISQQSGAR"	"[K].sISQQSGAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"581.82281"	"1162.63835"	"1162.63777"	"0.51"	"0.00029"	"8/84"	"8"	"84"	"2828077.76428223"	"HCD"	"MS2"	"0"	"146.1"	"100.000"	"21.4085"	"3724"	"3724"	"3703"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"242.7"	""	"160.3"	""	"174.7"	""	"260.1"	""	"278.1"	"269.5"	""	"784"	"39"	"35.000"	"28.000"	"0.0050966647458905"	"26"	"0"	"0.001021"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SISQQSGAR"	"[K].sISQQSGAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.4848"	"0.0000"	"1"	"1"	"1"	"581.82617"	"1162.64507"	"1162.63777"	"6.28"	"0.00365"	"8/84"	"8"	"84"	"2009847.96160889"	"HCD"	"MS2"	"0"	"121.3"	"100.000"	"21.2981"	"3697"	"3697"	"3672"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"183.9"	""	"129.5"	""	"135.8"	""	"227.9"	""	"236.4"	"237.5"	""	"754"	"33"	"35.000"	"28.000"	"0.0188513019686321"	""	"0"	"0.003561"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGAGDAK"	"[K].aDGAGDAk.[-]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18437"	"Non-histone chromosomal protein HMG-17 OS=Rattus norvegicus OX=10116 GN=Hmgn2 PE=1 SV=2"	"P18437"	"Non-histone chromosomal protein HMG-17 OS=Rattus norvegicus OX=10116 GN=Hmgn2 PE=1 SV=2"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"3"	"581.82678"	"1162.64629"	"1162.64682"	"-0.46"	"-0.00027"	"6/64"	"6"	"64"	"3710402.9005127"	"HCD"	"MS2"	"15.52353"	"299.5"	"100.000"	"24.1828"	"4864"	"4864"	"4841"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"518.3"	""	"281.6"	""	"370.4"	""	"362.9"	""	"575.1"	"738.0"	""	"761"	"32"	"35.000"	"28.000"	"0.0229802453477712"	""	"0.0004639"	"0.007988"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGAGDAK"	"[K].aDGAGDAk.[-]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18437"	"Non-histone chromosomal protein HMG-17 OS=Rattus norvegicus OX=10116 GN=Hmgn2 PE=1 SV=2"	"P18437"	"Non-histone chromosomal protein HMG-17 OS=Rattus norvegicus OX=10116 GN=Hmgn2 PE=1 SV=2"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"3"	"581.82697"	"1162.64665"	"1162.64682"	"-0.15"	"-0.00008"	"6/64"	"6"	"64"	"3947832.46624756"	"HCD"	"MS2"	"8.455763"	"308.3"	"100.000"	"24.2503"	"4876"	"4876"	"4853"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"517.5"	""	"302.6"	""	"366.3"	""	"371.2"	""	"602.8"	"772.1"	""	"761"	"34"	"35.000"	"28.000"	"0.016119614858185"	""	"0.0005778"	"0.00806"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NADGTVK"	"[K].nADGTVk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"581.84454"	"1162.68181"	"1162.68321"	"-1.20"	"-0.00070"	"10/64"	"10"	"64"	"4820429.16937256"	"HCD"	"MS2"	"10.7774"	"370.2"	"100.000"	"26.4545"	"5779"	"5779"	"5754"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"558.5"	"3.3"	"501.8"	""	"545.9"	""	"597.2"	""	"664.1"	"637.7"	""	"536"	"23"	"34.000"	"27.000"	"0.127096852049746"	"23"	"0.006189"	"0.07025"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NADGTVK"	"[K].nADGTVk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"581.84460"	"1162.68193"	"1162.68321"	"-1.10"	"-0.00064"	"10/64"	"10"	"64"	"4597130.49133301"	"HCD"	"MS2"	"0"	"342.0"	"100.000"	"26.7528"	"5900"	"5900"	"5882"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"519.5"	""	"497.9"	""	"526.7"	""	"470.3"	""	"580.6"	"644.0"	""	"536"	"24"	"34.000"	"27.000"	"0.114060374719843"	"22"	"0.006739"	"0.07563"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NADGTVK"	"[K].nADGTVk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"581.84521"	"1162.68315"	"1162.68321"	"-0.05"	"-0.00003"	"10/64"	"10"	"64"	"4555207.55163574"	"HCD"	"MS2"	"0"	"357.1"	"100.000"	"26.8222"	"5912"	"5912"	"5895"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"567.9"	"3.4"	"481.1"	""	"547.4"	""	"487.8"	""	"624.8"	"672.4"	""	"540"	"24"	"34.000"	"27.000"	"0.118676236168213"	"22"	"0.005921"	"0.06818"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NADGTVK"	"[K].nADGTVk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"581.84589"	"1162.68450"	"1162.68321"	"1.11"	"0.00064"	"10/64"	"10"	"64"	"4010392.73876953"	"HCD"	"MS2"	"0"	"322.3"	"100.000"	"26.5284"	"5793"	"5793"	"5763"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"493.2"	""	"459.7"	""	"447.9"	""	"514.9"	""	"557.3"	"581.5"	""	"545"	"24"	"34.000"	"27.000"	"0.10031514531759"	"22"	"0.006129"	"0.06999"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPEVGDVR"	"[K].yPEVGDVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"582.31567"	"1163.62407"	"1163.62580"	"-1.49"	"-0.00087"	"9/62"	"9"	"62"	"2639779.1708374"	"HCD"	"MS2"	"7.98037"	"112.5"	"100.000"	"47.6644"	"14386"	"14386"	"14365"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"127.7"	""	"124.6"	""	"134.4"	""	"197.2"	""	"236.0"	"253.7"	""	"780"	"18"	"35.000"	"28.000"	"0.575525547977598"	"21"	"0.0023"	"0.02429"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPEVGDVR"	"[K].yPEVGDVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"582.31610"	"1163.62493"	"1163.62580"	"-0.75"	"-0.00044"	"10/62"	"10"	"62"	"2314624.03100586"	"HCD"	"MS2"	"11.73612"	"103.0"	"100.000"	"47.9491"	"14490"	"14490"	"14474"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"128.1"	""	"123.0"	""	"129.8"	""	"166.7"	"3.6"	"212.4"	"214.3"	""	"782"	"27"	"35.000"	"28.000"	"0.0738204617496651"	"21"	"0.000936"	"0.01197"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPEVGDVR"	"[K].yPEVGDVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"582.31622"	"1163.62517"	"1163.62580"	"-0.55"	"-0.00032"	"11/62"	"11"	"62"	"3039948.70422363"	"HCD"	"MS2"	"0"	"118.9"	"100.000"	"47.9581"	"14505"	"14505"	"14488"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"157.1"	""	"126.8"	""	"135.8"	""	"188.5"	""	"233.9"	"289.0"	""	"789"	"24"	"35.000"	"28.000"	"0.14192111271894"	"19"	"0.0008629"	"0.009504"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPEVGDVR"	"[K].yPEVGDVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"582.31622"	"1163.62517"	"1163.62580"	"-0.55"	"-0.00032"	"4/62"	"4"	"62"	"3215548.80505371"	"HCD"	"MS2"	"0"	"120.1"	"100.000"	"48.2386"	"14607"	"14607"	"14590"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"140.3"	""	"137.6"	""	"139.7"	""	"197.2"	""	"242.2"	"286.1"	""	"789"	"26"	"35.000"	"28.000"	"0.0918432001148845"	"24"	"0.001036"	"0.01349"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSDVVPFR"	"[K].dSDVVPFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"582.31696"	"1163.62663"	"1163.62580"	"0.71"	"0.00042"	"7/60"	"7"	"60"	"5117524.08154297"	"HCD"	"MS2"	"5.853918"	"223.9"	"100.000"	"57.0130"	"18196"	"18196"	"18179"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"287.4"	""	"276.3"	""	"301.9"	""	"323.4"	""	"481.1"	"462.3"	""	"788"	"19"	"35.000"	"28.000"	"0.538885157284765"	"25"	"0.001374"	"0.01653"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSDVVPFR"	"[K].dSDVVPFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"582.31732"	"1163.62737"	"1163.62580"	"1.34"	"0.00078"	"7/60"	"7"	"60"	"4084276.41552734"	"HCD"	"MS2"	"11.88079"	"172.5"	"100.000"	"57.1533"	"18239"	"18239"	"18222"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"225.2"	""	"201.1"	""	"225.9"	""	"254.9"	"2.4"	"353.9"	"374.7"	""	"775"	"18"	"35.000"	"28.000"	"0.558819698715886"	"28"	"0.001812"	"0.02059"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMTEEGLR"	"[R].vMTEEGLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG55"	"Protein ABHD16A OS=Rattus norvegicus OX=10116 GN=Abhd16a PE=2 SV=1"	"Q6MG55"	"Protein ABHD16A OS=Rattus norvegicus OX=10116 GN=Abhd16a PE=2 SV=1"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"582.31793"	"1163.62859"	"1163.62917"	"-0.50"	"-0.00029"	"6/60"	"6"	"60"	"2071474.47247314"	"HCD"	"MS2"	"25.21724"	"155.3"	"100.000"	"46.2831"	"13812"	"13812"	"13789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"197.4"	""	"198.4"	""	"187.9"	""	"237.4"	"16.3"	"316.0"	"321.1"	""	"810"	"15"	"36.000"	"29.000"	"1.38820953551312"	"22"	"0.002379"	"0.02471"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLAGEFQR"	"[R].gGLAGEFQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"582.32654"	"1163.64580"	"1163.63704"	"7.53"	"0.00438"	"8/66"	"8"	"66"	"2254901.73114014"	"HCD"	"MS2"	"0"	"155.0"	"100.000"	"47.2801"	"14229"	"14229"	"14206"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"215.7"	""	"207.5"	""	"203.6"	""	"236.2"	""	"302.7"	"304.9"	""	"793"	"16"	"35.000"	"28.000"	"1.059847041035"	"18"	"0.004817"	"0.05084"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEESITR"	"[R].sLEESITR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920Q0"	"Paralemmin-1 OS=Rattus norvegicus OX=10116 GN=Palm PE=1 SV=1"	"Q920Q0"	"Paralemmin-1 OS=Rattus norvegicus OX=10116 GN=Palm PE=1 SV=1"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"582.32733"	"1163.64739"	"1163.64693"	"0.39"	"0.00023"	"6/68"	"6"	"68"	"2128072.71844482"	"HCD"	"MS2"	"32.1841"	"111.3"	"100.000"	"44.1769"	"12970"	"12970"	"12945"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"130.8"	""	"113.8"	""	"134.1"	""	"218.6"	""	"233.3"	"226.5"	""	"795"	"42"	"35.000"	"29.000"	"0.00280761227819527"	"28"	"0"	"0.003367"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEESITR"	"[R].sLEESITR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920Q0"	"Paralemmin-1 OS=Rattus norvegicus OX=10116 GN=Palm PE=1 SV=1"	"Q920Q0"	"Paralemmin-1 OS=Rattus norvegicus OX=10116 GN=Palm PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"582.32788"	"1163.64849"	"1163.64693"	"1.33"	"0.00078"	"6/68"	"6"	"68"	"2112026.38104248"	"HCD"	"MS2"	"24.69607"	"115.7"	"100.000"	"44.3193"	"13013"	"13013"	"12987"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"143.4"	"2.6"	"114.2"	""	"136.8"	""	"214.0"	""	"238.2"	"250.7"	""	"791"	"42"	"35.000"	"28.000"	"0.00271110593562028"	""	"0"	"0.003024"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAASVDK"	"[K].dAASVDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q3SWU3"	"Heterogeneous nuclear ribonucleoprotein D-like OS=Rattus norvegicus OX=10116 GN=Hnrnpdl PE=1 SV=1"	"Q3SWU3"	"Heterogeneous nuclear ribonucleoprotein D-like OS=Rattus norvegicus OX=10116 GN=Hnrnpdl PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"582.33673"	"1163.66619"	"1163.66722"	"-0.89"	"-0.00052"	"6/58"	"6"	"58"	"3661711.23156738"	"HCD"	"MS2"	"0"	"280.7"	"100.000"	"31.5828"	"7857"	"7857"	"7836"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"405.1"	""	"247.5"	""	"234.2"	""	"583.2"	""	"635.5"	"562.8"	""	"603"	"35"	"34.000"	"27.000"	"0.00910515443701207"	""	"0.003449"	"0.03345"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAASVDK"	"[K].dAASVDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q3SWU3"	"Heterogeneous nuclear ribonucleoprotein D-like OS=Rattus norvegicus OX=10116 GN=Hnrnpdl PE=1 SV=1"	"Q3SWU3"	"Heterogeneous nuclear ribonucleoprotein D-like OS=Rattus norvegicus OX=10116 GN=Hnrnpdl PE=1 SV=1"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"582.33691"	"1163.66655"	"1163.66722"	"-0.58"	"-0.00034"	"6/58"	"6"	"58"	"3755437.03363037"	"HCD"	"MS2"	"12.26247"	"300.6"	"100.000"	"31.6134"	"7860"	"7860"	"7837"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"445.0"	""	"272.8"	""	"245.2"	""	"630.3"	""	"665.1"	"604.4"	""	"611"	"34"	"34.000"	"27.000"	"0.0118307210523554"	"27"	"0.002973"	"0.02904"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSTGEK"	"[R].aLSTGEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.2143"	"0.0000"	"1"	"1"	"1"	"582.35516"	"1163.70305"	"1163.70361"	"-0.48"	"-0.00028"	"5/54"	"5"	"54"	"6444093.23535156"	"HCD"	"MS2"	"0"	"497.8"	"100.000"	"35.0233"	"9243"	"9243"	"9227"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"657.6"	""	"602.3"	""	"683.8"	""	"826.3"	""	"943.9"	"1009.0"	""	"376"	"28"	"32.000"	"25.000"	"0.0297959920182689"	""	"0.003967"	"0.04197"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSTGEK"	"[R].aLSTGEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.2143"	"0.0000"	"1"	"1"	"1"	"582.35522"	"1163.70317"	"1163.70361"	"-0.38"	"-0.00022"	"5/54"	"5"	"54"	"6968239.19647217"	"HCD"	"MS2"	"2.205357"	"502.9"	"100.000"	"34.9410"	"9215"	"9215"	"9194"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"688.5"	""	"613.5"	""	"689.7"	""	"854.7"	"0.4"	"963.7"	"957.5"	""	"376"	"28"	"32.000"	"25.000"	"0.0293871756816499"	""	"0.00413"	"0.04533"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DCSTNPPR"	"[R].dcSTNPPR.[L]"	"N-Term(TMT6plex); C2(Methylthio)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"582.77014"	"1164.53301"	"1164.53389"	"-0.76"	"-0.00044"	"6/68"	"6"	"68"	"3085014.1640625"	"HCD"	"MS2"	"24.0503"	"222.9"	"100.000"	"31.2246"	"7701"	"7701"	"7679"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"318.6"	""	"284.7"	""	"270.2"	""	"356.5"	"0.1"	"462.4"	"422.6"	""	"185"	"9"	"29.000"	"22.000"	"1.30059395982017"	"17"	"0.001374"	"0.01771"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DCSTNPPR"	"[R].dcSTNPPR.[L]"	"N-Term(TMT6plex); C2(Methylthio)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"582.77045"	"1164.53362"	"1164.53389"	"-0.24"	"-0.00014"	"5/68"	"5"	"68"	"1560936.1887207"	"HCD"	"MS2"	"21.43113"	"108.4"	"100.000"	"30.9878"	"7615"	"7615"	"7606"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"120.4"	""	"122.7"	""	"117.4"	""	"167.0"	""	"250.8"	"255.6"	""	"202"	"19"	"30.000"	"23.000"	"0.115696807085999"	"14"	"0.002056"	"0.02245"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPLADSYR"	"[K].gGPLADSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"582.81366"	"1164.62004"	"1164.62105"	"-0.87"	"-0.00051"	"5/66"	"5"	"66"	"2320207.37786865"	"HCD"	"MS2"	"17.97247"	"132.5"	"100.000"	"40.3308"	"11405"	"11405"	"11383"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"218.1"	""	"146.4"	""	"189.2"	""	"203.2"	""	"253.0"	"246.7"	""	"666"	"30"	"35.000"	"28.000"	"0.0343118578107058"	"14"	"0.0003538"	"0.006778"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPLADSYR"	"[K].gGPLADSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"582.81396"	"1164.62065"	"1164.62105"	"-0.34"	"-0.00020"	"5/66"	"5"	"66"	"2416066.10699463"	"HCD"	"MS2"	"16.37768"	"133.8"	"100.000"	"40.4876"	"11460"	"11460"	"11442"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"221.9"	""	"168.2"	""	"187.6"	""	"201.4"	""	"245.3"	"243.9"	""	"670"	"30"	"35.000"	"28.000"	"0.0347572019299034"	"15"	"0"	"0.001898"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQVEDAFR"	"[K].aQVEDAFR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"582.81403"	"1164.62078"	"1164.62105"	"-0.24"	"-0.00014"	"7/70"	"7"	"70"	"6321271.85943604"	"HCD"	"MS2"	"2.266077"	"272.5"	"100.000"	"48.1374"	"14579"	"14579"	"14562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"447.7"	""	"276.8"	""	"357.5"	""	"475.6"	""	"454.5"	"570.8"	""	"670"	"38"	"35.000"	"28.000"	"0.00503552558640157"	"23"	"0.0001301"	"0.003944"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPLADSYR"	"[K].gGPLADSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"582.81403"	"1164.62078"	"1164.62105"	"-0.24"	"-0.00014"	"13/66"	"13"	"66"	"27719499.9030762"	"HCD"	"MS2"	"2.1921"	"318.4"	"27.025"	"40.1844"	"11337"	"11337"	"11320"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"574.3"	""	"411.1"	""	"491.0"	""	"499.9"	""	"505.9"	"530.2"	""	"670"	"41"	"35.000"	"28.000"	"0.00289764252789857"	"16"	"0"	"0.0008797"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPLADSYR"	"[K].gGPLADSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"582.81409"	"1164.62090"	"1164.62105"	"-0.13"	"-0.00008"	"13/66"	"13"	"66"	"51646222.5102539"	"HCD"	"MS2"	"31.57977"	"542.8"	"26.270"	"39.8739"	"11210"	"11210"	"11196"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1024.0"	""	"699.8"	""	"818.0"	""	"912.3"	"2.2"	"801.4"	"866.9"	""	"666"	"41"	"35.000"	"28.000"	"0.00268191020919289"	"19"	"0"	"0.002318"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQVEDAFR"	"[K].aQVEDAFR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"582.81415"	"1164.62102"	"1164.62105"	"-0.03"	"-0.00002"	"7/70"	"7"	"70"	"7361781.67034912"	"HCD"	"MS2"	"0"	"340.9"	"100.000"	"48.7761"	"14826"	"14826"	"14808"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"533.3"	""	"347.9"	""	"476.8"	""	"541.3"	""	"563.9"	"770.4"	""	"666"	"39"	"35.000"	"28.000"	"0.00458610753141684"	"24"	"0.0002479"	"0.005372"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQVEDAFR"	"[K].aQVEDAFR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"582.81415"	"1164.62102"	"1164.62105"	"-0.03"	"-0.00002"	"7/70"	"7"	"70"	"7034944.43261719"	"HCD"	"MS2"	"0"	"324.8"	"100.000"	"48.4459"	"14705"	"14705"	"14690"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"513.9"	""	"328.8"	""	"424.8"	""	"518.5"	""	"563.3"	"733.9"	""	"666"	"39"	"35.000"	"28.000"	"0.00454406184484112"	"24"	"0.0002479"	"0.005784"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPLADSYR"	"[K].gGPLADSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"582.81415"	"1164.62102"	"1164.62105"	"-0.03"	"-0.00002"	"14/66"	"14"	"66"	"46801443.4399414"	"HCD"	"MS2"	"22.48295"	"574.9"	"31.103"	"39.6824"	"11141"	"11141"	"11126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1095.7"	""	"758.7"	""	"835.1"	""	"921.7"	""	"895.0"	"931.6"	""	"666"	"38"	"35.000"	"28.000"	"0.00483553168656717"	"20"	"0"	"0.002484"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQVEDAFR"	"[K].aQVEDAFR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"582.81445"	"1164.62163"	"1164.62105"	"0.50"	"0.00029"	"12/70"	"12"	"70"	"7074754.5390625"	"HCD"	"MS2"	"3.636397"	"298.5"	"100.000"	"48.4769"	"14704"	"14704"	"14686"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"479.6"	""	"318.8"	""	"387.6"	""	"502.1"	""	"508.4"	"636.5"	""	"675"	"43"	"35.000"	"28.000"	"0.0016265738169848"	"23"	"0"	"0.002621"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPLADSYR"	"[K].gGPLADSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"582.81445"	"1164.62163"	"1164.62105"	"0.50"	"0.00029"	"13/66"	"13"	"66"	"31050217.2751465"	"HCD"	"MS2"	"1.322236"	"404.5"	"31.263"	"39.9814"	"11263"	"11263"	"11252"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"763.4"	""	"489.8"	""	"625.3"	""	"656.8"	""	"626.7"	"661.3"	""	"675"	"41"	"35.000"	"28.000"	"0.00282666132717822"	"17"	"0"	"0.001368"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QELSGISTT"	"[R].qELSGISTT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O08719"	"Ena/VASP-like protein OS=Rattus norvegicus OX=10116 GN=Evl PE=1 SV=2"	"O08719"	"Ena/VASP-like protein OS=Rattus norvegicus OX=10116 GN=Evl PE=1 SV=2"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"582.81921"	"1164.63115"	"1164.63095"	"0.17"	"0.00010"	"6/78"	"6"	"78"	"512214.38861084"	"HCD"	"MS2"	"5.467386"	"24.7"	"100.000"	"57.6945"	"18458"	"18458"	"18438"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.4"	""	"29.5"	""	"34.3"	""	"39.5"	""	"47.7"	"56.1"	""	"698"	"33"	"35.000"	"28.000"	"0.0194010585787371"	"28"	"0.0003538"	"0.007006"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QELSGISTT"	"[R].qELSGISTT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O08719"	"Ena/VASP-like protein OS=Rattus norvegicus OX=10116 GN=Evl PE=1 SV=2"	"O08719"	"Ena/VASP-like protein OS=Rattus norvegicus OX=10116 GN=Evl PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"582.81927"	"1164.63127"	"1164.63095"	"0.28"	"0.00016"	"7/78"	"7"	"78"	"581078.192077637"	"HCD"	"MS2"	"0"	"25.5"	"100.000"	"57.5080"	"18397"	"18397"	"18377"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.1"	""	"31.5"	""	"32.1"	""	"45.0"	"0.4"	"50.6"	"52.4"	""	"698"	"40"	"35.000"	"28.000"	"0.00354670793811873"	""	"0.0001301"	"0.004985"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYAQILR"	"[R].dGYAQILR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"582.83173"	"1164.65618"	"1164.65744"	"-1.08"	"-0.00063"	"6/62"	"6"	"62"	"2318364.13336182"	"HCD"	"MS2"	"3.607181"	"113.0"	"100.000"	"58.6601"	"18867"	"18867"	"18847"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"218.5"	""	"153.0"	""	"155.6"	""	"155.3"	""	"186.6"	"206.6"	""	"700"	"30"	"35.000"	"28.000"	"0.0323644360878378"	"25"	"0.0003538"	"0.006513"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYAQILR"	"[R].dGYAQILR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"582.83173"	"1164.65618"	"1164.65744"	"-1.08"	"-0.00063"	"7/62"	"7"	"62"	"2671079.44445801"	"HCD"	"MS2"	"2.517161"	"125.2"	"100.000"	"58.8343"	"18923"	"18923"	"18904"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"245.4"	""	"163.7"	""	"181.5"	""	"173.1"	""	"202.6"	"225.1"	""	"700"	"25"	"35.000"	"28.000"	"0.120245281764956"	"27"	"0.001374"	"0.01679"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYAQILR"	"[R].dGYAQILR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"582.83173"	"1164.65618"	"1164.65744"	"-1.08"	"-0.00063"	"7/62"	"7"	"62"	"3936384.57861328"	"HCD"	"MS2"	"0"	"193.9"	"100.000"	"58.5328"	"18800"	"18800"	"18783"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"384.3"	""	"269.5"	""	"278.7"	""	"281.2"	"4.3"	"302.1"	"311.5"	""	"700"	"21"	"35.000"	"28.000"	"0.251807142301295"	"25"	"0.001211"	"0.01526"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYAQILR"	"[R].dGYAQILR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"582.83209"	"1164.65691"	"1164.65744"	"-0.46"	"-0.00027"	"7/62"	"7"	"62"	"4244994.88305664"	"HCD"	"MS2"	"2.545406"	"201.6"	"100.000"	"58.3489"	"18740"	"18740"	"18719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"393.0"	""	"271.2"	""	"277.9"	""	"315.5"	""	"320.8"	"326.7"	""	"716"	"24"	"35.000"	"28.000"	"0.14121571414295"	"25"	"0.001211"	"0.01489"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQVAEHPR"	"[R].vQVAEHPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIG6"	"N-acetylgalactosamine kinase OS=Rattus norvegicus OX=10116 GN=Galk2 PE=2 SV=1"	"Q5XIG6"	"N-acetylgalactosamine kinase OS=Rattus norvegicus OX=10116 GN=Galk2 PE=2 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"582.83771"	"1164.66814"	"1164.66867"	"-0.46"	"-0.00027"	"12/68"	"12"	"68"	"1452199.28216553"	"HCD"	"MS2"	"38.04036"	"81.2"	"100.000"	"22.7342"	"4263"	"4263"	"4235"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"101.1"	""	"86.6"	""	"98.0"	""	"146.0"	"0.6"	"160.9"	"177.6"	""	"658"	"7"	"35.000"	"28.000"	"6.25454754094765"	"17"	"0.001886"	"0.02095"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVDFDVR"	"[R].dAVDFDVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"D4A631"	"Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Rattus norvegicus OX=10116 GN=Arfgef1 PE=1 SV=1"	"D4A631"	"Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Rattus norvegicus OX=10116 GN=Arfgef1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"583.30591"	"1165.60454"	"1165.60507"	"-0.45"	"-0.00026"	"6/66"	"6"	"66"	"1408591.27166748"	"HCD"	"MS2"	"41.4219"	"51.5"	"100.000"	"59.4606"	"19179"	"19179"	"19158"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"81.8"	""	"53.7"	""	"70.6"	""	"88.1"	""	"103.5"	"90.6"	""	"587"	"30"	"34.000"	"27.000"	"0.02935"	"25"	"0.007808"	"0.09533"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVDFDVR"	"[R].dAVDFDVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"D4A631"	"Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Rattus norvegicus OX=10116 GN=Arfgef1 PE=1 SV=1"	"D4A631"	"Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Rattus norvegicus OX=10116 GN=Arfgef1 PE=1 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"583.30670"	"1165.60613"	"1165.60507"	"0.91"	"0.00053"	"6/66"	"6"	"66"	"1326325.50378418"	"HCD"	"MS2"	"53.18611"	"50.6"	"100.000"	"59.1777"	"19079"	"19079"	"19053"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.4"	""	"63.5"	""	"68.1"	""	"91.1"	"1.2"	"91.5"	"95.7"	""	"583"	"34"	"34.000"	"27.000"	"0.0124347929730664"	"26"	"0.001374"	"0.01711"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITFEDVR"	"[R].gITFEDVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"583.32404"	"1165.64079"	"1165.64145"	"-0.57"	"-0.00033"	"5/62"	"5"	"62"	"1919239.69708252"	"HCD"	"MS2"	"5.51016"	"93.9"	"100.000"	"63.5382"	"20815"	"20815"	"20795"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"161.8"	""	"136.0"	""	"143.6"	""	"145.9"	""	"159.5"	"145.5"	""	"653"	"34"	"35.000"	"28.000"	"0.0118272338983052"	"21"	"0.0001301"	"0.003939"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITFEDVR"	"[R].gITFEDVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"583.32404"	"1165.64079"	"1165.64145"	"-0.57"	"-0.00033"	"5/62"	"5"	"62"	"4825887.70178223"	"HCD"	"MS2"	"0"	"208.5"	"100.000"	"63.9476"	"20968"	"20968"	"20951"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"336.3"	""	"298.2"	""	"304.2"	""	"299.7"	"1.0"	"358.2"	"375.1"	""	"653"	"37"	"35.000"	"28.000"	"0.00639562785899706"	"26"	"0.0003538"	"0.006411"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITFEDVR"	"[R].gITFEDVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"583.32404"	"1165.64079"	"1165.64145"	"-0.57"	"-0.00033"	"6/62"	"6"	"62"	"5489330.70269775"	"HCD"	"MS2"	"0"	"232.9"	"100.000"	"63.8284"	"20934"	"20934"	"20917"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"383.3"	""	"318.3"	""	"325.7"	""	"331.3"	""	"418.5"	"429.1"	""	"653"	"36"	"35.000"	"28.000"	"0.00781417594466359"	"22"	"0.0002479"	"0.005265"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITFEDVR"	"[R].gITFEDVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"583.32410"	"1165.64092"	"1165.64145"	"-0.46"	"-0.00027"	"7/62"	"7"	"62"	"1024937.48937988"	"HCD"	"MS2"	"21.21259"	"57.6"	"100.000"	"63.6293"	"20838"	"20838"	"20811"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"99.6"	""	"81.0"	""	"87.2"	""	"91.6"	""	"94.0"	"94.3"	""	"653"	"28"	"35.000"	"28.000"	"0.0560897088406952"	""	"0.003967"	"0.04092"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STEAATK"	"[R].sTEAATk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11662"	"NADH-ubiquinone oxidoreductase chain 2 OS=Rattus norvegicus OX=10116 GN=Mtnd2 PE=3 SV=3"	"P11662"	"NADH-ubiquinone oxidoreductase chain 2 OS=Rattus norvegicus OX=10116 GN=Mtnd2 PE=3 SV=3"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"583.34442"	"1165.68157"	"1165.68287"	"-1.12"	"-0.00065"	"5/58"	"5"	"58"	"1519665.75891113"	"HCD"	"MS2"	"0"	"105.9"	"100.000"	"23.5420"	"4593"	"4593"	"4569"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"121.8"	""	"125.4"	""	"147.7"	""	"181.2"	"3.4"	"197.9"	"228.1"	""	"422"	"19"	"33.000"	"26.000"	"0.245630592205614"	"19"	"0.005309"	"0.06019"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTPTSK"	"[K].sSTPTSk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"583.34491"	"1165.68254"	"1165.68287"	"-0.28"	"-0.00017"	"6/58"	"6"	"58"	"4992108.67486572"	"HCD"	"MS2"	"0"	"331.4"	"100.000"	"23.2183"	"4461"	"4461"	"4431"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"448.8"	""	"335.7"	""	"422.8"	""	"622.5"	""	"519.2"	"800.2"	""	"430"	"23"	"33.000"	"26.000"	"0.117608432022204"	"21"	"0.007279"	"0.08365"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTPTSK"	"[K].sSTPTSk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"583.34497"	"1165.68266"	"1165.68287"	"-0.18"	"-0.00010"	"6/58"	"6"	"58"	"5586200.12713623"	"HCD"	"MS2"	"0"	"374.7"	"100.000"	"23.1722"	"4459"	"4459"	"4435"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"502.0"	""	"387.4"	""	"464.9"	""	"746.1"	""	"603.5"	"854.6"	""	"430"	"22"	"33.000"	"26.000"	"0.148060243714019"	"18"	"0.00736"	"0.08715"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDEGIAYR"	"[K].nDEGIAYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"583.80365"	"1166.60002"	"1166.60032"	"-0.25"	"-0.00015"	"6/72"	"6"	"72"	"6252260.9510498"	"HCD"	"MS2"	"12.92681"	"320.6"	"100.000"	"33.1566"	"8489"	"8489"	"8468"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"541.5"	""	"400.6"	""	"415.6"	""	"544.6"	""	"608.7"	"529.3"	""	"518"	"35"	"34.000"	"27.000"	"0.00764363189706595"	"20"	"0.0001301"	"0.004266"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDEGIAYR"	"[K].nDEGIAYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"583.80389"	"1166.60051"	"1166.60032"	"0.17"	"0.00010"	"6/72"	"6"	"72"	"6837190.53466797"	"HCD"	"MS2"	"4.470661"	"353.6"	"100.000"	"33.1545"	"8495"	"8495"	"8475"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"619.8"	"2.5"	"438.7"	""	"454.4"	""	"579.6"	""	"684.1"	"572.8"	""	"527"	"35"	"34.000"	"27.000"	"0.00768742018189307"	"20"	"0.0003538"	"0.006744"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAIGEGMTR"	"[K].sAIGEGmTR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"583.80518"	"1166.60307"	"1166.60369"	"-0.53"	"-0.00031"	"6/78"	"6"	"78"	"1417564.26208496"	"HCD"	"MS2"	"27.06484"	"82.0"	"100.000"	"23.6222"	"4626"	"4626"	"4599"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"96.0"	""	"91.0"	""	"118.4"	""	"174.5"	""	"138.0"	"160.3"	""	"565"	"29"	"34.000"	"27.000"	"0.0321379708245119"	"21"	"0.003449"	"0.03496"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNYIEGTK"	"[R].LNYIEGTk.[M]"	"K8(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"583.83380"	"1166.66033"	"1166.66186"	"-1.31"	"-0.00076"	"6/72"	"6"	"72"	"571806.406738281"	"HCD"	"MS2"	"9.382794"	"35.9"	"100.000"	"44.6093"	"13130"	"13130"	"13107"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.6"	""	"46.6"	""	"51.1"	""	"51.0"	"1.3"	"77.9"	"62.5"	""	"428"	"46"	"33.000"	"26.000"	"0.000482407191400621"	"24"	"0.006769"	"0.07858"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNYIEGTK"	"[R].LNYIEGTk.[M]"	"K8(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"583.83459"	"1166.66191"	"1166.66186"	"0.05"	"0.00003"	"6/72"	"6"	"72"	"1242501.26855469"	"HCD"	"MS2"	"4.074135"	"68.1"	"100.000"	"44.3604"	"13041"	"13041"	"13016"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"97.3"	""	"105.1"	""	"90.5"	""	"100.9"	""	"129.2"	"122.7"	""	"450"	"47"	"33.000"	"26.000"	"0.000406614178352458"	"26"	"0.003358"	"0.03237"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HENVIGIR"	"[R].hENVIGIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.84546"	"1166.68364"	"1166.68432"	"-0.58"	"-0.00034"	"6/66"	"6"	"66"	"765451.185791016"	"HCD"	"MS2"	"46.96382"	"59.2"	"100.000"	"30.7606"	"7514"	"7514"	"7499"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.7"	""	"78.9"	""	"79.8"	""	"91.9"	"1.5"	"115.1"	"110.4"	""	"388"	"24"	"32.000"	"25.000"	"0.079946918704882"	"14"	"0.00447"	"0.04668"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIEPGVPR"	"[R].vAIEPGVPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"583.85785"	"1166.70842"	"1166.70947"	"-0.90"	"-0.00053"	"8/64"	"8"	"64"	"2128915.78399658"	"HCD"	"MS2"	"13.51026"	"84.7"	"100.000"	"55.3131"	"17502"	"17502"	"17479"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"150.0"	""	"127.2"	""	"126.7"	""	"130.0"	""	"128.0"	"139.3"	""	"224"	"32"	"30.000"	"23.000"	"0.00778427235699453"	"16"	"0"	"0.0005488"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIEPGVPR"	"[R].vAIEPGVPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"583.85803"	"1166.70879"	"1166.70947"	"-0.59"	"-0.00034"	"6/64"	"6"	"64"	"1886074.38946533"	"HCD"	"MS2"	"4.984376"	"77.2"	"100.000"	"55.5016"	"17565"	"17565"	"17543"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"127.1"	""	"111.2"	""	"130.5"	""	"109.9"	"3.4"	"120.6"	"127.1"	""	"240"	"38"	"30.000"	"23.000"	"0.0017872332932531"	"17"	"0"	"0.0003673"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIEPGVPR"	"[R].vAIEPGVPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.85822"	"1166.70915"	"1166.70947"	"-0.27"	"-0.00016"	"6/64"	"6"	"64"	"3066707.89324951"	"HCD"	"MS2"	"13.8958"	"124.0"	"100.000"	"55.7873"	"17682"	"17682"	"17666"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"198.1"	""	"187.9"	""	"202.1"	""	"186.2"	""	"193.9"	"204.5"	""	"240"	"36"	"30.000"	"23.000"	"0.00290523485608342"	"15"	"0"	"0.0004937"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIEPGVPR"	"[R].vAIEPGVPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.85840"	"1166.70952"	"1166.70947"	"0.04"	"0.00002"	"6/64"	"6"	"64"	"2771324.49145508"	"HCD"	"MS2"	"20.00151"	"113.1"	"100.000"	"55.6125"	"17624"	"17624"	"17605"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"182.5"	""	"166.7"	""	"179.7"	""	"183.3"	"0.5"	"183.0"	"173.3"	""	"240"	"38"	"30.000"	"23.000"	"0.00184154037935915"	"15"	"0"	"0.0004601"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGQYDNR"	"[R].sVGQYDNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"584.30084"	"1167.59441"	"1167.59557"	"-0.99"	"-0.00058"	"6/74"	"6"	"74"	"4268509.1854248"	"HCD"	"MS2"	"8.546297"	"202.7"	"100.000"	"25.9613"	"5580"	"5580"	"5559"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"340.4"	""	"284.6"	""	"286.1"	""	"304.0"	"1.3"	"356.6"	"345.3"	""	"469"	"40"	"33.000"	"26.000"	"0.00230750604300986"	"23"	"0.0001301"	"0.003908"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGQYDNR"	"[R].sVGQYDNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"584.30139"	"1167.59551"	"1167.59557"	"-0.05"	"-0.00003"	"6/74"	"6"	"74"	"4175217.203125"	"HCD"	"MS2"	"4.223209"	"213.8"	"100.000"	"26.0442"	"5598"	"5598"	"5580"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"359.6"	""	"294.2"	""	"295.5"	""	"333.4"	""	"383.4"	"358.4"	""	"459"	"36"	"33.000"	"26.000"	"0.00603646504139991"	"22"	"0"	"0.003095"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDYDSAR"	"[K].lVDYDSAR.[H]"	"N-Term(TMT6plex)"	"1"	"3"	"Q68FR2"	"Bridging integrator 2 OS=Rattus norvegicus OX=10116 GN=Bin2 PE=1 SV=1"	"O08839; Q68FR2; O08838"	"Myc box-dependent-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Bin1 PE=1 SV=1; Bridging integrator 2 OS=Rattus norvegicus OX=10116 GN=Bin2 PE=1 SV=1; Amphiphysin OS=Rattus norvegicus OX=10116 GN=Amph PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"584.31329"	"1167.61931"	"1167.62072"	"-1.21"	"-0.00070"	"6/62"	"6"	"62"	"3023097.89172363"	"HCD"	"MS2"	"0"	"146.7"	"100.000"	"48.4060"	"14675"	"14675"	"14656"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"181.0"	""	"148.1"	""	"167.8"	""	"285.2"	""	"297.4"	"316.5"	""	"496"	"30"	"33.000"	"26.000"	"0.0256124828628827"	"18"	"0.0003538"	"0.006646"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDYDSAR"	"[K].lVDYDSAR.[H]"	"N-Term(TMT6plex)"	"1"	"3"	"Q68FR2"	"Bridging integrator 2 OS=Rattus norvegicus OX=10116 GN=Bin2 PE=1 SV=1"	"O08839; Q68FR2; O08838"	"Myc box-dependent-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Bin1 PE=1 SV=1; Bridging integrator 2 OS=Rattus norvegicus OX=10116 GN=Bin2 PE=1 SV=1; Amphiphysin OS=Rattus norvegicus OX=10116 GN=Amph PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"584.31348"	"1167.61968"	"1167.62072"	"-0.89"	"-0.00052"	"6/62"	"6"	"62"	"3281326.27856445"	"HCD"	"MS2"	"2.951342"	"153.2"	"100.000"	"48.0983"	"14563"	"14563"	"14546"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"197.5"	""	"154.4"	""	"174.9"	""	"280.7"	""	"306.8"	"343.8"	""	"506"	"30"	"34.000"	"27.000"	"0.0274233509247364"	"18"	"0.0006732"	"0.008173"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSEAAELR"	"[K].ySEAAELR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"584.31348"	"1167.61968"	"1167.62072"	"-0.89"	"-0.00052"	"7/64"	"7"	"64"	"5331475.94970703"	"HCD"	"MS2"	"35.33227"	"222.9"	"100.000"	"41.0223"	"11685"	"11685"	"11667"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"231.8"	""	"218.0"	""	"234.7"	""	"412.1"	""	"510.9"	"517.0"	""	"506"	"29"	"34.000"	"27.000"	"0.0302078990429461"	"22"	"0.000936"	"0.01237"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLIDGSR"	"[R].dYLIDGSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"584.31348"	"1167.61968"	"1167.62072"	"-0.89"	"-0.00052"	"6/68"	"6"	"68"	"11972969.5407104"	"HCD"	"MS2"	"0"	"354.6"	"71.182"	"52.5914"	"16394"	"16394"	"16376"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"554.6"	""	"536.7"	""	"540.8"	""	"506.5"	""	"575.2"	"641.5"	""	"506"	"30"	"34.000"	"27.000"	"0.0248954809757567"	"22"	"0.0006732"	"0.008407"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDYSGLR"	"[K].eVDYSGLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIM5"	"Protein CDV3 homolog OS=Rattus norvegicus OX=10116 GN=Cdv3 PE=1 SV=1"	"Q5XIM5"	"Protein CDV3 homolog OS=Rattus norvegicus OX=10116 GN=Cdv3 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"584.31360"	"1167.61992"	"1167.62072"	"-0.68"	"-0.00040"	"7/64"	"7"	"64"	"1106724.01251221"	"HCD"	"MS2"	"30.43981"	"69.1"	"100.000"	"48.6992"	"14808"	"14808"	"14783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.1"	""	"71.3"	""	"85.7"	""	"130.2"	""	"122.6"	"156.3"	""	"510"	"18"	"34.000"	"27.000"	"0.405079420892434"	"17"	"0.0006732"	"0.008954"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLIDGSR"	"[R].dYLIDGSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"584.31360"	"1167.61992"	"1167.62072"	"-0.68"	"-0.00040"	"6/68"	"6"	"68"	"2487280.28448486"	"HCD"	"MS2"	"32.1867"	"121.9"	"100.000"	"52.3024"	"16265"	"16265"	"16240"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"192.0"	""	"177.4"	""	"168.3"	""	"189.6"	""	"215.6"	"219.2"	""	"510"	"30"	"34.000"	"27.000"	"0.0281540048075029"	"24"	"0.0001301"	"0.003966"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLIDGSR"	"[R].dYLIDGSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"584.31360"	"1167.61992"	"1167.62072"	"-0.68"	"-0.00040"	"6/68"	"6"	"68"	"6165452.15423584"	"HCD"	"MS2"	"0"	"289.9"	"100.000"	"52.9282"	"16520"	"16520"	"16501"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"450.9"	""	"449.1"	""	"417.1"	""	"407.3"	"0.1"	"488.5"	"530.3"	""	"510"	"27"	"34.000"	"27.000"	"0.045976952391919"	"24"	"0.0005778"	"0.008065"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSEAAELR"	"[K].ySEAAELR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"584.31366"	"1167.62004"	"1167.62072"	"-0.58"	"-0.00034"	"7/64"	"7"	"64"	"5003809.28210449"	"HCD"	"MS2"	"32.31614"	"199.8"	"100.000"	"41.2206"	"11756"	"11756"	"11743"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"200.0"	""	"201.8"	""	"208.4"	""	"364.3"	""	"458.1"	"469.6"	""	"510"	"29"	"34.000"	"27.000"	"0.0297536452350546"	"21"	"0.0008629"	"0.01053"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLIDGSR"	"[R].dYLIDGSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"584.31378"	"1167.62029"	"1167.62072"	"-0.37"	"-0.00022"	"5/68"	"5"	"68"	"1237504.35467529"	"HCD"	"MS2"	"22.08476"	"62.9"	"100.000"	"54.0990"	"17010"	"17010"	"16987"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"98.7"	""	"81.2"	""	"92.6"	""	"98.1"	"2.5"	"113.7"	"108.7"	""	"510"	"22"	"34.000"	"27.000"	"0.150848216714746"	"20"	"0.0023"	"0.02322"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEITEQR"	"[K].yEITEQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"584.31396"	"1167.62065"	"1167.62072"	"-0.06"	"-0.00003"	"5/56"	"5"	"56"	"2514375.29693604"	"HCD"	"MS2"	"0"	"127.5"	"100.000"	"37.8489"	"10386"	"10386"	"10376"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"184.5"	""	"153.4"	""	"163.5"	""	"204.9"	"2.9"	"261.6"	"238.9"	""	"510"	"31"	"34.000"	"27.000"	"0.0224667462617044"	"25"	"0.003922"	"0.04073"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEITEQR"	"[K].yEITEQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"584.31403"	"1167.62078"	"1167.62072"	"0.05"	"0.00003"	"5/56"	"5"	"56"	"2628595.3571167"	"HCD"	"MS2"	"0"	"133.4"	"100.000"	"37.6389"	"10308"	"10308"	"10296"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"184.6"	""	"154.9"	""	"178.9"	""	"208.4"	"2.2"	"283.1"	"253.4"	""	"512"	"31"	"34.000"	"27.000"	"0.0220414400559258"	"25"	"0.003653"	"0.03757"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDYSGLR"	"[K].eVDYSGLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIM5"	"Protein CDV3 homolog OS=Rattus norvegicus OX=10116 GN=Cdv3 PE=1 SV=1"	"Q5XIM5"	"Protein CDV3 homolog OS=Rattus norvegicus OX=10116 GN=Cdv3 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"584.31415"	"1167.62102"	"1167.62072"	"0.26"	"0.00015"	"7/64"	"7"	"64"	"1159782.98913574"	"HCD"	"MS2"	"17.84691"	"71.4"	"100.000"	"49.0686"	"14946"	"14946"	"14918"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.5"	""	"73.1"	""	"78.8"	""	"132.1"	""	"118.2"	"191.9"	""	"516"	"16"	"34.000"	"27.000"	"0.581593716735327"	"16"	"0.000936"	"0.01212"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLIDGSR"	"[R].dYLIDGSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"584.31421"	"1167.62114"	"1167.62072"	"0.36"	"0.00021"	"6/68"	"6"	"68"	"35268629.7506104"	"HCD"	"MS2"	"0.0928369"	"639.2"	"43.425"	"52.2810"	"16268"	"16268"	"16251"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1016.7"	""	"960.2"	""	"924.0"	""	"974.6"	""	"1028.5"	"1146.1"	""	"515"	"30"	"34.000"	"27.000"	"0.0252800095327646"	"24"	"0.0003538"	"0.006301"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLIDGSR"	"[R].dYLIDGSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"584.31458"	"1167.62187"	"1167.62072"	"0.99"	"0.00058"	"6/68"	"6"	"68"	"1674727.60498047"	"HCD"	"MS2"	"27.52586"	"95.4"	"100.000"	"51.9934"	"16150"	"16150"	"16126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"151.2"	""	"140.3"	""	"134.7"	""	"152.2"	""	"163.9"	"161.3"	""	"513"	"26"	"34.000"	"27.000"	"0.0609659533519281"	"25"	"0.0001301"	"0.004894"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLIDGSR"	"[R].dYLIDGSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5517"	"0.0000"	"1"	"1"	"1"	"584.31458"	"1167.62187"	"1167.62072"	"0.99"	"0.00058"	"6/68"	"6"	"68"	"39912814.9782715"	"HCD"	"MS2"	"0.1921099"	"691.8"	"41.519"	"52.6178"	"16394"	"16394"	"16377"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1120.8"	""	"1038.5"	""	"973.8"	""	"1051.9"	""	"1153.5"	"1209.2"	""	"513"	"29"	"34.000"	"27.000"	"0.0358994148239876"	"27"	"0.000936"	"0.01292"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSESLAR"	"[K].lYSESLAR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.0714"	"0.0000"	"1"	"1"	"1"	"584.33124"	"1167.65520"	"1167.65710"	"-1.63"	"-0.00095"	"7/60"	"7"	"60"	"1161030.15649414"	"HCD"	"MS2"	"34.08031"	"64.1"	"100.000"	"51.3105"	"15860"	"15860"	"15839"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.2"	""	"91.0"	""	"97.6"	""	"99.9"	""	"111.7"	"115.4"	""	"401"	"14"	"33.000"	"26.000"	"0.71468452251962"	"26"	"0.002973"	"0.02935"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSESLAR"	"[K].lYSESLAR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"584.33142"	"1167.65557"	"1167.65710"	"-1.32"	"-0.00077"	"11/60"	"11"	"60"	"1461653.96905518"	"HCD"	"MS2"	"18.63777"	"79.2"	"100.000"	"51.0059"	"15747"	"15747"	"15726"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"132.8"	""	"115.8"	""	"115.7"	""	"113.8"	""	"132.2"	"143.5"	""	"381"	"26"	"32.000"	"25.000"	"0.0441463680818995"	""	"0.0003538"	"0.006094"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSESLAR"	"[K].lYSESLAR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"584.33167"	"1167.65605"	"1167.65710"	"-0.90"	"-0.00053"	"7/60"	"7"	"60"	"15951912.6928101"	"HCD"	"MS2"	"0"	"439.6"	"68.810"	"51.2870"	"15862"	"15862"	"15847"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"682.1"	""	"660.7"	""	"624.4"	""	"656.8"	"5.2"	"732.6"	"797.6"	""	"387"	"38"	"32.000"	"25.000"	"0.00292874101572406"	"23"	"0.0002479"	"0.005661"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EASYSLIR"	"[K].eASYSLIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"584.33173"	"1167.65618"	"1167.65710"	"-0.80"	"-0.00046"	"6/64"	"6"	"64"	"3087521.90771484"	"HCD"	"MS2"	"49.17688"	"162.3"	"100.000"	"53.1193"	"16598"	"16598"	"16579"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"241.9"	""	"236.9"	""	"258.1"	""	"243.5"	""	"293.1"	"264.6"	""	"387"	"23"	"32.000"	"25.000"	"0.103438203543314"	"24"	"0.0001301"	"0.004813"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYSVALER"	"[R].tYSVALER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"584.33185"	"1167.65642"	"1167.65710"	"-0.59"	"-0.00034"	"7/68"	"7"	"68"	"1868640.87475586"	"HCD"	"MS2"	"16.14189"	"98.7"	"100.000"	"49.7820"	"15237"	"15237"	"15217"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"143.1"	""	"122.5"	""	"141.1"	""	"142.5"	""	"178.5"	"208.4"	""	"417"	"43"	"33.000"	"26.000"	"0.0011670945991173"	""	"0"	"0.001976"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSESLAR"	"[K].lYSESLAR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"584.33185"	"1167.65642"	"1167.65710"	"-0.59"	"-0.00034"	"7/60"	"7"	"60"	"2234586.12164307"	"HCD"	"MS2"	"5.364648"	"112.4"	"100.000"	"51.9208"	"16109"	"16109"	"16091"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"155.0"	""	"155.3"	""	"160.9"	""	"196.7"	""	"195.8"	"201.7"	""	"417"	"26"	"33.000"	"26.000"	"0.0524935639437721"	"20"	"0.0003538"	"0.006542"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EASYSLIR"	"[K].eASYSLIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"584.33185"	"1167.65642"	"1167.65710"	"-0.59"	"-0.00034"	"6/64"	"6"	"64"	"2942046.97302246"	"HCD"	"MS2"	"40.93261"	"166.2"	"100.000"	"52.8907"	"16516"	"16516"	"16497"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"238.7"	""	"248.9"	""	"251.9"	""	"260.8"	""	"317.4"	"265.2"	""	"417"	"29"	"33.000"	"26.000"	"0.0278680165199933"	"25"	"0.0001301"	"0.004919"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSESLAR"	"[K].lYSESLAR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"584.33197"	"1167.65666"	"1167.65710"	"-0.38"	"-0.00022"	"7/60"	"7"	"60"	"2220806.00378418"	"HCD"	"MS2"	"10.19767"	"104.3"	"100.000"	"51.6047"	"15991"	"15991"	"15973"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"144.7"	""	"137.3"	""	"153.7"	""	"165.4"	""	"179.1"	"208.7"	""	"417"	"29"	"33.000"	"26.000"	"0.0284515583978791"	"20"	"0.0003538"	"0.006262"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDGYLLR"	"[K].tTDGYLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"584.33197"	"1167.65666"	"1167.65710"	"-0.38"	"-0.00022"	"6/60"	"6"	"60"	"4694299.25482178"	"HCD"	"MS2"	"17.2555"	"227.8"	"100.000"	"53.4276"	"16724"	"16724"	"16706"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"320.0"	""	"343.8"	""	"368.5"	""	"371.1"	""	"390.6"	"366.0"	""	"417"	"36"	"33.000"	"26.000"	"0.00531014107663981"	""	"0.0002479"	"0.005363"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDGYLLR"	"[K].tTDGYLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"584.33197"	"1167.65666"	"1167.65710"	"-0.38"	"-0.00022"	"6/60"	"6"	"60"	"5344696.543396"	"HCD"	"MS2"	"4.363227"	"237.9"	"100.000"	"53.7315"	"16849"	"16849"	"16833"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"339.7"	""	"336.4"	""	"374.8"	""	"386.9"	""	"438.3"	"376.3"	""	"417"	"36"	"33.000"	"26.000"	"0.00523728320969747"	""	"0.0001301"	"0.004222"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDGYLLR"	"[K].tTDGYLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"584.33209"	"1167.65691"	"1167.65710"	"-0.17"	"-0.00010"	"6/60"	"6"	"60"	"5426436.12591553"	"HCD"	"MS2"	"14.03997"	"256.4"	"100.000"	"53.1945"	"16640"	"16640"	"16622"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"381.0"	""	"375.5"	""	"399.1"	""	"421.9"	""	"456.8"	"394.1"	""	"417"	"36"	"33.000"	"26.000"	"0.00502465281881155"	""	"0.0001301"	"0.004143"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDGYLLR"	"[K].tTDGYLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"584.33215"	"1167.65703"	"1167.65710"	"-0.06"	"-0.00004"	"7/60"	"7"	"60"	"4869396.394104"	"HCD"	"MS2"	"10.16577"	"213.7"	"100.000"	"53.5028"	"16766"	"16766"	"16748"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"291.4"	""	"277.1"	""	"362.8"	""	"352.4"	"0.0"	"385.6"	"352.8"	""	"416"	"24"	"33.000"	"26.000"	"0.0865094069827566"	""	"0.0003538"	"0.006093"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSESLAR"	"[K].lYSESLAR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"584.33240"	"1167.65752"	"1167.65710"	"0.35"	"0.00021"	"7/60"	"7"	"60"	"14670709.559082"	"HCD"	"MS2"	"0"	"508.4"	"85.295"	"51.6033"	"15980"	"15980"	"15963"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"797.0"	""	"754.8"	""	"743.1"	""	"758.0"	""	"827.3"	"929.1"	""	"417"	"37"	"33.000"	"26.000"	"0.00389140165539028"	"18"	"0.0001301"	"0.004114"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMGLYGER"	"[K].nMGLYGER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"584.80206"	"1168.59685"	"1168.59821"	"-1.16"	"-0.00068"	"7/70"	"7"	"70"	"5911219.08984375"	"HCD"	"MS2"	"0"	"281.6"	"100.000"	"43.8596"	"12840"	"12840"	"12825"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"438.7"	""	"393.0"	""	"448.2"	""	"399.0"	""	"452.3"	"537.1"	""	"388"	"37"	"32.000"	"25.000"	"0.00353021966570337"	"23"	"0.0002479"	"0.005876"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMGLYGER"	"[K].nMGLYGER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"584.80225"	"1168.59722"	"1168.59821"	"-0.85"	"-0.00050"	"6/70"	"6"	"70"	"3446273.41485596"	"HCD"	"MS2"	"14.48388"	"180.5"	"100.000"	"43.7183"	"12774"	"12774"	"12762"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"266.3"	""	"236.6"	""	"266.3"	""	"278.7"	"3.8"	"306.8"	"350.7"	""	"388"	"30"	"32.000"	"25.000"	"0.020691964751867"	"16"	"0.0002479"	"0.005939"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMGLYGER"	"[K].nMGLYGER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"584.80231"	"1168.59734"	"1168.59821"	"-0.75"	"-0.00044"	"7/70"	"7"	"70"	"4053791.5022583"	"HCD"	"MS2"	"2.166121"	"206.4"	"100.000"	"44.0162"	"12893"	"12893"	"12875"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"312.3"	""	"276.2"	""	"310.2"	""	"312.7"	"0.1"	"349.3"	"392.9"	""	"386"	"44"	"32.000"	"25.000"	"0.000712126765240391"	"20"	"0"	"0.003446"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMGLYGER"	"[K].nMGLYGER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"584.80249"	"1168.59770"	"1168.59821"	"-0.43"	"-0.00025"	"5/70"	"5"	"70"	"2681364.99255371"	"HCD"	"MS2"	"35.99037"	"148.6"	"100.000"	"43.5800"	"12728"	"12728"	"12716"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"226.2"	""	"200.0"	""	"200.2"	""	"252.7"	"1.3"	"253.2"	"272.9"	""	"393"	"32"	"32.000"	"25.000"	"0.0129527670415509"	"18"	"0.000936"	"0.01124"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWTDSFR"	"[R].eWTDSFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q53UA7"	"Serine/threonine-protein kinase TAO3 OS=Rattus norvegicus OX=10116 GN=Taok3 PE=1 SV=1"	"Q53UA7"	"Serine/threonine-protein kinase TAO3 OS=Rattus norvegicus OX=10116 GN=Taok3 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"585.29309"	"1169.57891"	"1169.57885"	"0.04"	"0.00003"	"6/56"	"6"	"56"	"756360.721740723"	"HCD"	"MS2"	"15.7205"	"48.3"	"100.000"	"64.1868"	"21065"	"21065"	"21043"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.0"	""	"62.9"	""	"75.2"	""	"67.2"	""	"91.0"	"83.6"	""	"383"	"20"	"32.000"	"25.000"	"0.17707970030917"	"17"	"0.002973"	"0.02928"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLSHPSVFGR"	"[M].aGLSHPSVFGR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"585.30627"	"1169.60527"	"1169.60618"	"-0.78"	"-0.00046"	"9/86"	"9"	"86"	"4337856.54180908"	"HCD"	"MS2"	"3.771806"	"22.0"	"100.000"	"55.7626"	"17685"	"17685"	"17665"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.0"	""	"26.2"	""	"29.7"	""	"36.9"	""	"40.3"	"48.9"	"NoQuanLabels"	"443"	"74"	"33.000"	"26.000"	"8.28654953022599E-07"	"25"	"0"	"4.287E-05"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLSHPSVFGR"	"[M].aGLSHPSVFGR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"2"	"2"	"0.8831"	"0.0000"	"1"	"1"	"1"	"585.30664"	"1169.60600"	"1169.60618"	"-0.15"	"-0.00009"	"9/86"	"9"	"86"	"8964400.45776367"	"HCD"	"MS2"	"0.2564985"	"21.7"	"94.707"	"56.0616"	"17807"	"17807"	"17789"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.4"	""	"28.4"	""	"24.7"	""	"44.0"	""	"44.4"	"39.5"	"NoQuanLabels"	"430"	"77"	"33.000"	"26.000"	"4.70368749149154E-07"	"26"	"0"	"1.644E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLSHPSVFGR"	"[M].aGLSHPSVFGR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"585.30664"	"1169.60600"	"1169.60618"	"-0.15"	"-0.00009"	"9/86"	"9"	"86"	"10408862.7661133"	"HCD"	"MS2"	"0.241996"	"20.0"	"88.564"	"56.2089"	"17853"	"17853"	"17835"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.2"	""	"25.7"	""	"17.5"	""	"44.8"	"1.0"	"40.7"	"35.8"	"NoQuanLabels"	"430"	"74"	"33.000"	"26.000"	"8.00642168447321E-07"	"25"	"0"	"4.815E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLSHPSVFGR"	"[M].aGLSHPSVFGR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"2"	"2"	"0.8769"	"0.0000"	"1"	"1"	"1"	"585.30682"	"1169.60637"	"1169.60618"	"0.16"	"0.00009"	"9/86"	"9"	"86"	"2925147.27197266"	"HCD"	"MS2"	"2.803527"	"24.4"	"100.000"	"55.9140"	"17733"	"17733"	"17713"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.2"	""	"37.6"	""	"33.5"	""	"40.5"	""	"47.3"	"44.0"	"NoQuanLabels"	"430"	"65"	"33.000"	"26.000"	"7.26839397842862E-06"	"25"	"0"	"4.591E-06"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HIAEEADR"	"[K].hIAEEADR.[K]"	"N-Term(TMT6plex)"	"2"	"2"	"P09495; Q63610"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"P09495; Q63610"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"0"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"585.30902"	"1169.61077"	"1169.61122"	"-0.39"	"-0.00023"	"7/62"	"7"	"62"	"928425.842102051"	"HCD"	"MS2"	"14.45634"	"58.3"	"100.000"	"20.9704"	"3563"	"3563"	"3545"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.7"	""	"58.4"	""	"78.5"	""	"96.5"	"1.0"	"109.1"	"118.2"	""	"419"	"47"	"33.000"	"26.000"	"0.000393716873120285"	"19"	"0"	"0.0007049"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HIAEEADR"	"[K].hIAEEADR.[K]"	"N-Term(TMT6plex)"	"2"	"2"	"P09495; Q63610"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"P09495; Q63610"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"585.30927"	"1169.61125"	"1169.61122"	"0.03"	"0.00002"	"7/62"	"7"	"62"	"601475.841003418"	"HCD"	"MS2"	"0"	"45.0"	"100.000"	"21.0603"	"3582"	"3582"	"3561"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.8"	""	"47.3"	""	"57.7"	""	"88.9"	""	"87.5"	"78.4"	""	"419"	"46"	"33.000"	"26.000"	"0.000544733428483124"	"19"	"0.0001301"	"0.004629"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIDMGYR"	"[K].vAIDmGYR.[H]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"585.31287"	"1169.61846"	"1169.61861"	"-0.13"	"-0.00008"	"7/56"	"7"	"56"	"4611074.99291992"	"HCD"	"MS2"	"19.93223"	"212.0"	"100.000"	"45.9932"	"13706"	"13706"	"13689"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"260.3"	""	"257.9"	""	"281.6"	""	"427.9"	""	"387.7"	"396.4"	""	"426"	"14"	"33.000"	"26.000"	"0.768032509636099"	"13"	"0.00736"	"0.08648"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIDMGYR"	"[K].vAIDmGYR.[H]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"585.31299"	"1169.61870"	"1169.61861"	"0.08"	"0.00004"	"7/56"	"7"	"56"	"5941115.72772217"	"HCD"	"MS2"	"48.39269"	"229.9"	"100.000"	"45.6228"	"13554"	"13554"	"13534"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"234.9"	""	"204.9"	"3.2"	"215.2"	""	"627.7"	""	"457.8"	"442.1"	""	"426"	"13"	"33.000"	"26.000"	"1.08737564994762"	"13"	"0.004942"	"0.05354"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIDMGYR"	"[K].vAIDmGYR.[H]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"585.31311"	"1169.61894"	"1169.61861"	"0.29"	"0.00017"	"7/56"	"7"	"56"	"4409365.98419189"	"HCD"	"MS2"	"27.63046"	"195.0"	"100.000"	"46.1497"	"13758"	"13758"	"13741"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"234.6"	""	"237.0"	""	"276.9"	""	"382.7"	""	"358.5"	"363.4"	""	"428"	"16"	"33.000"	"26.000"	"0.550064697512538"	"13"	"0.00736"	"0.08644"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESGYAGK"	"[R].eSGYAGk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V7C6"	"GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1"	"Q4V7C6"	"GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"585.33185"	"1169.65642"	"1169.65666"	"-0.20"	"-0.00012"	"6/50"	"6"	"50"	"1247312.0871582"	"HCD"	"MS2"	"0"	"114.8"	"100.000"	"30.2307"	"7299"	"7299"	"7274"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"185.4"	""	"158.2"	""	"159.2"	""	"161.9"	""	"205.2"	"219.6"	""	"428"	"22"	"33.000"	"26.000"	"0.150111433861874"	"21"	"0.003967"	"0.04212"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGYGFINR"	"[R].nGYGFINR.[N]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"2"	"Q62764"	"Y-box-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ybx3 PE=1 SV=1"	"P62961; Q62764"	"Nuclease-sensitive element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ybx1 PE=2 SV=3; Y-box-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ybx3 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"585.80817"	"1170.60906"	"1170.61049"	"-1.22"	"-0.00072"	"7/72"	"7"	"72"	"1997139.92663574"	"HCD"	"MS2"	"13.01861"	"83.6"	"100.000"	"58.5768"	"18833"	"18833"	"18815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"121.4"	""	"98.5"	""	"96.2"	""	"151.8"	""	"164.5"	"160.7"	""	"444"	"14"	"33.000"	"26.000"	"0.887877344469637"	"18"	"0.006685"	"0.07547"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGYGFINR"	"[R].nGYGFINR.[N]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"2"	"Q62764"	"Y-box-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ybx3 PE=1 SV=1"	"P62961; Q62764"	"Nuclease-sensitive element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ybx1 PE=2 SV=3; Y-box-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ybx3 PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"585.80859"	"1170.60991"	"1170.61049"	"-0.49"	"-0.00029"	"7/72"	"7"	"72"	"987985.193908691"	"HCD"	"MS2"	"14.81009"	"55.1"	"100.000"	"59.0347"	"19005"	"19005"	"18984"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.7"	""	"57.0"	""	"63.2"	""	"104.4"	"0.5"	"116.3"	"104.9"	""	"435"	"11"	"33.000"	"26.000"	"1.91628129879243"	"20"	"0.003111"	"0.03058"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGYGFINR"	"[R].nGYGFINR.[N]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"2"	"Q62764"	"Y-box-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ybx3 PE=1 SV=1"	"P62961; Q62764"	"Nuclease-sensitive element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ybx1 PE=2 SV=3; Y-box-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ybx3 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"585.80859"	"1170.60991"	"1170.61049"	"-0.49"	"-0.00029"	"7/72"	"7"	"72"	"1417256.01531982"	"HCD"	"MS2"	"20.25813"	"62.3"	"100.000"	"58.7307"	"18881"	"18881"	"18856"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.9"	""	"63.0"	""	"72.7"	""	"118.8"	""	"127.6"	"118.6"	""	"435"	"12"	"33.000"	"26.000"	"1.23725512458535"	"19"	"0.006769"	"0.07933"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TELTPAYF"	"[K].tELTPAYF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"585.81519"	"1170.62309"	"1170.62441"	"-1.12"	"-0.00066"	"4/64"	"4"	"64"	"170770.036437988"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"102.8023"	"35850"	"35850"	"35843"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.1"	""	"5.2"	""	"5.6"	""	"9.4"	"1.8"	"10.5"	"7.8"	""	"446"	"21"	"33.000"	"26.000"	"0.16761190536606"	"20"	"0.005921"	"0.06809"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TELTPAYF"	"[K].tELTPAYF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"585.81543"	"1170.62358"	"1170.62441"	"-0.70"	"-0.00041"	"4/64"	"4"	"64"	"173420.473571777"	"HCD"	"MS2"	"4.38141"	"4.7"	"100.000"	"102.7501"	"35901"	"35901"	"35896"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.8"	""	"5.2"	""	"7.4"	""	"6.3"	""	"9.0"	"8.4"	""	"453"	"22"	"33.000"	"26.000"	"0.153839622787792"	"14"	"0.005427"	"0.06248"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TELTPAYF"	"[K].tELTPAYF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"585.81561"	"1170.62395"	"1170.62441"	"-0.39"	"-0.00023"	"6/64"	"6"	"64"	"152990.583984375"	"HCD"	"MS2"	"5.719932"	"4.1"	"100.000"	"103.5879"	"36052"	"36052"	"36049"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.1"	""	"4.2"	""	"6.7"	""	"7.8"	""	"3.8"	"9.6"	""	"453"	"22"	"33.000"	"26.000"	"0.141275940236768"	"14"	"0.001374"	"0.01586"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TELTPAYF"	"[K].tELTPAYF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"585.81573"	"1170.62419"	"1170.62441"	"-0.18"	"-0.00011"	"6/64"	"6"	"64"	"1292611.45324707"	"HCD"	"MS2"	"0.4619206"	"14.4"	"100.000"	"103.3278"	"35986"	"35986"	"35983"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.9"	""	"26.5"	""	"22.5"	""	"12.8"	""	"24.2"	"29.9"	""	"453"	"36"	"33.000"	"26.000"	"0.00633969268897183"	""	"0.003449"	"0.03467"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TELTPAYF"	"[K].tELTPAYF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"585.81580"	"1170.62432"	"1170.62441"	"-0.08"	"-0.00005"	"6/64"	"6"	"64"	"1749886.9921875"	"HCD"	"MS2"	"0.5022899"	"19.6"	"100.000"	"103.0545"	"35919"	"35919"	"35917"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.0"	""	"27.0"	""	"27.2"	""	"25.6"	"2.3"	"30.6"	"40.7"	""	"469"	"33"	"33.000"	"26.000"	"0.0124492402172167"	"26"	"0.001546"	"0.01887"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TELTPAYF"	"[K].tELTPAYF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"585.81586"	"1170.62444"	"1170.62441"	"0.03"	"0.00002"	"7/64"	"7"	"64"	"1878330.61309814"	"HCD"	"MS2"	"0"	"17.5"	"100.000"	"103.0055"	"35974"	"35974"	"35970"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.1"	""	"23.3"	""	"29.7"	""	"22.2"	""	"34.0"	"28.4"	""	"468"	"46"	"33.000"	"26.000"	"0.000622609663992921"	""	"0"	"0.003791"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TELTPAYF"	"[K].tELTPAYF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"585.81616"	"1170.62505"	"1170.62441"	"0.55"	"0.00032"	"7/64"	"7"	"64"	"1161871.08435059"	"HCD"	"MS2"	"0.6321149"	"13.7"	"100.000"	"103.2634"	"36040"	"36040"	"36037"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.2"	""	"23.2"	""	"20.5"	""	"18.2"	""	"20.6"	"26.4"	""	"463"	"38"	"33.000"	"26.000"	"0.00380672053924257"	"24"	"0.0002479"	"0.005508"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QATYTTTR"	"[R].qATYTTTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"585.82526"	"1170.64324"	"1170.63162"	"9.92"	"0.00581"	"7/78"	"7"	"78"	"1548502.45593262"	"HCD"	"MS2"	"0"	"101.1"	"100.000"	"22.7709"	"4278"	"4278"	"4251"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"114.5"	""	"128.4"	""	"131.2"	""	"190.7"	""	"207.6"	"194.4"	""	"455"	"30"	"33.000"	"26.000"	"0.0247161829372882"	"21"	"0.002937"	"0.02804"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFQYVDR"	"[K].dFQYVDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O88339"	"Epsin-1 OS=Rattus norvegicus OX=10116 GN=Epn1 PE=1 SV=1"	"O88339"	"Epsin-1 OS=Rattus norvegicus OX=10116 GN=Epn1 PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"586.30048"	"1171.59368"	"1171.59450"	"-0.71"	"-0.00041"	"5/66"	"5"	"66"	"3737955.69720459"	"HCD"	"MS2"	"53.05709"	"174.5"	"100.000"	"49.8878"	"15280"	"15280"	"15262"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"286.0"	"3.2"	"207.1"	""	"217.7"	""	"281.3"	"9.4"	"327.7"	"320.9"	""	"377"	"12"	"32.000"	"25.000"	"1.30710764434123"	"20"	"0.006958"	"0.08118"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFQYVDR"	"[K].dFQYVDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O88339"	"Epsin-1 OS=Rattus norvegicus OX=10116 GN=Epn1 PE=1 SV=1"	"O88339"	"Epsin-1 OS=Rattus norvegicus OX=10116 GN=Epn1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"586.30096"	"1171.59465"	"1171.59450"	"0.13"	"0.00007"	"5/66"	"5"	"66"	"3834004.9251709"	"HCD"	"MS2"	"51.73455"	"174.6"	"100.000"	"49.5257"	"15144"	"15144"	"15126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"280.8"	""	"223.6"	""	"237.8"	""	"283.3"	"0.2"	"307.1"	"320.7"	""	"370"	"14"	"32.000"	"25.000"	"0.69850855321202"	"21"	"0.006254"	"0.07081"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPVIETIR"	"[K].dPVIETIR.[N]"	"N-Term(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"586.34747"	"1171.68767"	"1171.68840"	"-0.63"	"-0.00037"	"7/66"	"7"	"66"	"8314418.293396"	"HCD"	"MS2"	"1.835367"	"304.4"	"100.000"	"57.1857"	"18266"	"18266"	"18253"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"401.4"	""	"356.0"	""	"350.6"	""	"659.0"	""	"560.2"	"561.9"	""	"491"	"36"	"33.000"	"26.000"	"0.00666885840499995"	""	"0"	"0.003785"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPVIETIR"	"[K].dPVIETIR.[N]"	"N-Term(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.3784"	"0.0000"	"1"	"1"	"1"	"586.34747"	"1171.68767"	"1171.68840"	"-0.63"	"-0.00037"	"7/66"	"7"	"66"	"7940419.58166504"	"HCD"	"MS2"	"1.754104"	"297.5"	"100.000"	"57.3927"	"18336"	"18336"	"18323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"404.3"	""	"339.2"	""	"351.4"	""	"622.3"	""	"552.2"	"554.0"	""	"491"	"37"	"33.000"	"26.000"	"0.00498943646184842"	""	"0.0002479"	"0.005297"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPVIETIR"	"[K].dPVIETIR.[N]"	"N-Term(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.3182"	"0.0000"	"1"	"1"	"1"	"586.34772"	"1171.68816"	"1171.68840"	"-0.21"	"-0.00012"	"11/66"	"11"	"66"	"769550.415649414"	"HCD"	"MS2"	"26.24961"	"36.7"	"100.000"	"57.7312"	"18473"	"18473"	"18454"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.6"	""	"41.5"	""	"42.4"	""	"80.3"	"1.3"	"65.1"	"65.6"	""	"491"	"22"	"33.000"	"26.000"	"0.154900028069888"	""	"0.000936"	"0.01209"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIVEAAAVR"	"[R].nIVEAAAVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"0"	"2"	"2"	"0.6852"	"0.0000"	"1"	"1"	"1"	"586.35309"	"1171.69890"	"1171.69964"	"-0.63"	"-0.00037"	"7/80"	"7"	"80"	"3556888.14294434"	"HCD"	"MS2"	"7.438781"	"144.4"	"100.000"	"49.0787"	"14962"	"14962"	"14944"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"187.1"	""	"200.1"	""	"216.4"	""	"240.3"	"2.2"	"251.3"	"270.1"	""	"421"	"54"	"33.000"	"26.000"	"9.12540399005747E-05"	""	"0"	"0.0001559"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIVEAAAVR"	"[R].nIVEAAAVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"0"	"2"	"2"	"0.6275"	"0.0000"	"1"	"1"	"1"	"586.35315"	"1171.69902"	"1171.69964"	"-0.53"	"-0.00031"	"7/80"	"7"	"80"	"2304279.87677002"	"HCD"	"MS2"	"43.25537"	"108.8"	"100.000"	"48.7867"	"14844"	"14844"	"14815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"175.5"	""	"174.1"	""	"162.8"	""	"172.7"	""	"157.1"	"186.0"	""	"421"	"51"	"33.000"	"26.000"	"0.000173481073210237"	""	"0"	"0.0001748"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIVEAAAVR"	"[R].nIVEAAAVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"586.35327"	"1171.69927"	"1171.69964"	"-0.32"	"-0.00019"	"7/80"	"7"	"80"	"2732253.80743408"	"HCD"	"MS2"	"24.20684"	"124.2"	"100.000"	"49.1815"	"14992"	"14992"	"14966"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"175.0"	""	"174.7"	""	"193.8"	""	"219.0"	"1.3"	"201.1"	"209.8"	""	"419"	"54"	"33.000"	"26.000"	"8.24487408079855E-05"	""	"0"	"0.000237"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIVEAAAVR"	"[R].nIVEAAAVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"0"	"2"	"2"	"0.7547"	"0.0000"	"1"	"1"	"1"	"586.35327"	"1171.69927"	"1171.69964"	"-0.32"	"-0.00019"	"7/80"	"7"	"80"	"2445126.67156982"	"HCD"	"MS2"	"11.92159"	"107.6"	"100.000"	"49.5033"	"15123"	"15123"	"15105"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"141.6"	"2.5"	"156.7"	""	"166.1"	""	"169.2"	"2.1"	"190.6"	"190.0"	""	"419"	"53"	"33.000"	"26.000"	"9.77651401758434E-05"	""	"0"	"0.0001333"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDEYR"	"[K].lTFDEYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"586.81036"	"1172.61345"	"1172.61490"	"-1.24"	"-0.00073"	"5/54"	"5"	"54"	"4100536.34210205"	"HCD"	"MS2"	"0"	"197.6"	"100.000"	"68.5012"	"22832"	"22832"	"22815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"257.6"	""	"265.2"	""	"315.1"	""	"287.6"	""	"372.5"	"377.3"	""	"428"	"24"	"33.000"	"26.000"	"0.0806146129825566"	"18"	"0.006685"	"0.0746"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDEYR"	"[K].lTFDEYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"586.81061"	"1172.61394"	"1172.61490"	"-0.82"	"-0.00048"	"6/54"	"6"	"54"	"1831853.05407715"	"HCD"	"MS2"	"0"	"92.0"	"100.000"	"68.0598"	"22637"	"22637"	"22615"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"144.1"	""	"145.5"	""	"133.0"	""	"126.9"	"1.2"	"150.6"	"168.9"	""	"442"	"29"	"33.000"	"26.000"	"0.0277582621976567"	"19"	"0.003717"	"0.03877"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDEYR"	"[K].lTFDEYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"586.81061"	"1172.61394"	"1172.61490"	"-0.82"	"-0.00048"	"6/54"	"6"	"54"	"3198200.93414307"	"HCD"	"MS2"	"0.4265515"	"151.8"	"100.000"	"68.6686"	"22886"	"22886"	"22869"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"196.3"	""	"206.4"	""	"223.6"	""	"232.2"	""	"281.8"	"300.6"	""	"442"	"31"	"33.000"	"26.000"	"0.0185520657020787"	"20"	"0.003922"	"0.04035"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDEYR"	"[K].lTFDEYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"586.81061"	"1172.61394"	"1172.61490"	"-0.82"	"-0.00048"	"10/54"	"10"	"54"	"16357521.4733887"	"HCD"	"MS2"	"0"	"444.1"	"58.382"	"68.1876"	"22704"	"22704"	"22687"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"624.1"	""	"641.8"	""	"667.4"	""	"642.1"	""	"789.1"	"843.5"	""	"442"	"31"	"33.000"	"26.000"	"0.01743380859937"	"20"	"0.00557"	"0.06307"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDEYR"	"[K].lTFDEYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"586.81079"	"1172.61431"	"1172.61490"	"-0.51"	"-0.00030"	"5/54"	"5"	"54"	"1364332.97021484"	"HCD"	"MS2"	"0"	"72.9"	"100.000"	"67.9014"	"22587"	"22587"	"22562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"108.8"	""	"106.0"	""	"110.6"	""	"107.4"	"0.5"	"123.0"	"133.6"	""	"411"	"23"	"33.000"	"26.000"	"0.102757096937769"	"15"	"0.003449"	"0.03426"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEFSEIR"	"[K].yEFSEIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G063"	"Cysteine-rich with EGF-like domain protein 2 OS=Rattus norvegicus OX=10116 GN=Creld2 PE=1 SV=1"	"Q4G063"	"Cysteine-rich with EGF-like domain protein 2 OS=Rattus norvegicus OX=10116 GN=Creld2 PE=1 SV=1"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"586.81091"	"1172.61455"	"1172.61490"	"-0.30"	"-0.00018"	"5/54"	"5"	"54"	"2360155.85028076"	"HCD"	"MS2"	"3.553722"	"110.8"	"100.000"	"61.7263"	"20068"	"20068"	"20049"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"171.7"	""	"147.7"	""	"148.4"	""	"170.3"	""	"228.7"	"190.2"	""	"411"	"21"	"33.000"	"26.000"	"0.166269207281157"	"24"	"0.006769"	"0.07916"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEFSEIR"	"[K].yEFSEIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G063"	"Cysteine-rich with EGF-like domain protein 2 OS=Rattus norvegicus OX=10116 GN=Creld2 PE=1 SV=1"	"Q4G063"	"Cysteine-rich with EGF-like domain protein 2 OS=Rattus norvegicus OX=10116 GN=Creld2 PE=1 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"586.81116"	"1172.61504"	"1172.61490"	"0.11"	"0.00007"	"5/54"	"5"	"54"	"2844142.26751709"	"HCD"	"MS2"	"3.906048"	"135.9"	"100.000"	"61.6511"	"20053"	"20053"	"20033"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"229.3"	""	"181.0"	""	"196.7"	""	"203.2"	""	"249.5"	"226.6"	""	"453"	"34"	"33.000"	"26.000"	"0.00893445789200506"	"25"	"0.00379"	"0.03902"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDEYR"	"[K].lTFDEYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"586.81116"	"1172.61504"	"1172.61490"	"0.11"	"0.00007"	"6/54"	"6"	"54"	"15157902.5916748"	"HCD"	"MS2"	"0"	"520.8"	"75.518"	"68.3550"	"22758"	"22758"	"22742"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"751.0"	""	"777.3"	""	"758.2"	""	"770.2"	""	"897.9"	"985.6"	""	"453"	"31"	"33.000"	"26.000"	"0.0171028389566221"	"20"	"0.004942"	"0.05475"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLFYER"	"[K].tDLFYER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P83871"	"PHD finger-like domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Phf5a PE=2 SV=1"	"P83871"	"PHD finger-like domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Phf5a PE=2 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"586.81122"	"1172.61516"	"1172.61490"	"0.22"	"0.00013"	"5/58"	"5"	"58"	"1148156.26452637"	"HCD"	"MS2"	"34.74643"	"57.3"	"100.000"	"64.8471"	"21329"	"21329"	"21303"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.6"	""	"70.3"	""	"83.9"	""	"92.4"	""	"111.5"	"112.2"	""	"453"	"30"	"33.000"	"26.000"	"0.0248924822631466"	"25"	"0.003189"	"0.03219"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLFYER"	"[K].tDLFYER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P83871"	"PHD finger-like domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Phf5a PE=2 SV=1"	"P83871"	"PHD finger-like domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Phf5a PE=2 SV=1"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"586.81152"	"1172.61577"	"1172.61490"	"0.74"	"0.00043"	"5/58"	"5"	"58"	"1296564.94293213"	"HCD"	"MS2"	"29.97317"	"68.8"	"100.000"	"64.7850"	"21319"	"21319"	"21294"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"85.0"	""	"82.7"	""	"82.9"	""	"125.5"	""	"135.3"	"147.3"	""	"452"	"27"	"33.000"	"26.000"	"0.0402817601443268"	"22"	"0.0023"	"0.02302"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGQQNEVR"	"[R].iGQQNEVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K1P7"	"Transcription activator BRG1 OS=Rattus norvegicus OX=10116 GN=Smarca4 PE=1 SV=1"	"Q8K1P7"	"Transcription activator BRG1 OS=Rattus norvegicus OX=10116 GN=Smarca4 PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"586.83215"	"1172.65703"	"1172.65850"	"-1.25"	"-0.00074"	"7/66"	"7"	"66"	"853354.965270996"	"HCD"	"MS2"	"0"	"51.4"	"100.000"	"27.1748"	"6071"	"6071"	"6055"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.9"	""	"59.4"	""	"63.9"	""	"96.6"	""	"102.7"	"99.0"	""	"556"	"33"	"34.000"	"27.000"	"0.0131233525471278"	"22"	"0.001546"	"0.01889"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVAQNLDR"	"[K].qVAQNLDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"586.83295"	"1172.65862"	"1172.65850"	"0.10"	"0.00006"	"7/70"	"7"	"70"	"2619895.81738281"	"HCD"	"MS2"	"0"	"135.9"	"100.000"	"29.3303"	"6946"	"6946"	"6924"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"216.6"	""	"184.2"	""	"157.2"	""	"234.5"	"1.5"	"231.2"	"262.1"	""	"569"	"51"	"34.000"	"27.000"	"0.000240481831448103"	""	"0"	"0.001142"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVAQNLDR"	"[K].qVAQNLDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"586.83313"	"1172.65898"	"1172.65850"	"0.41"	"0.00024"	"7/70"	"7"	"70"	"2471684.56140137"	"HCD"	"MS2"	"9.45958"	"131.3"	"100.000"	"29.3239"	"6931"	"6931"	"6907"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"234.0"	""	"152.7"	""	"168.2"	""	"228.1"	"0.3"	"223.5"	"235.1"	""	"569"	"51"	"34.000"	"27.000"	"0.00025065840437078"	""	"0"	"0.001173"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HELIEFR"	"[K].hELIEFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"391.55859"	"1172.66123"	"1172.66252"	"-1.11"	"-0.00043"	"6/54"	"6"	"54"	"4527277.89013672"	"HCD"	"MS2"	"13.09359"	"75.0"	"100.000"	"49.1529"	"14992"	"14992"	"14976"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.3"	""	"82.5"	""	"84.0"	""	"132.6"	""	"163.3"	"159.6"	""	"613"	"34"	"34.000"	"27.000"	"0.0121459217499292"	"24"	"0.002711"	"0.02597"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HELIEFR"	"[K].hELIEFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"391.55859"	"1172.66123"	"1172.66252"	"-1.11"	"-0.00043"	"6/54"	"6"	"54"	"7020951.86193848"	"HCD"	"MS2"	"16.48423"	"118.3"	"100.000"	"48.8419"	"14866"	"14866"	"14847"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"144.3"	""	"134.5"	""	"131.7"	""	"199.1"	""	"252.9"	"265.3"	""	"613"	"33"	"34.000"	"27.000"	"0.0148398830664526"	"24"	"0.002379"	"0.02463"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HELIEFR"	"[K].hELIEFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"391.55862"	"1172.66132"	"1172.66252"	"-1.03"	"-0.00040"	"6/54"	"6"	"54"	"6116747.78961182"	"HCD"	"MS2"	"9.013206"	"101.9"	"100.000"	"49.4642"	"15107"	"15107"	"15089"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"120.4"	""	"114.8"	""	"107.5"	""	"177.1"	""	"219.9"	"230.5"	""	"613"	"36"	"34.000"	"27.000"	"0.00743755994142761"	"24"	"0.000936"	"0.01277"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HELIEFR"	"[K].hELIEFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"391.55872"	"1172.66159"	"1172.66252"	"-0.79"	"-0.00031"	"6/54"	"6"	"54"	"5713070.7833252"	"HCD"	"MS2"	"29.13671"	"102.1"	"100.000"	"49.1746"	"14989"	"14989"	"14966"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"113.1"	""	"112.8"	""	"118.3"	""	"173.0"	"1.9"	"221.7"	"230.3"	""	"604"	"34"	"34.000"	"27.000"	"0.011508187866492"	"24"	"0.001812"	"0.02079"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALLDQIR"	"[R].dALLDQIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"O08816"	"Neural Wiskott-Aldrich syndrome protein OS=Rattus norvegicus OX=10116 GN=Wasl PE=1 SV=2"	"O08816"	"Neural Wiskott-Aldrich syndrome protein OS=Rattus norvegicus OX=10116 GN=Wasl PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"586.84485"	"1172.68242"	"1172.68365"	"-1.05"	"-0.00062"	"7/68"	"7"	"68"	"636368.671691895"	"HCD"	"MS2"	"36.02409"	"25.0"	"100.000"	"70.9993"	"23850"	"23850"	"23825"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.3"	""	"31.4"	""	"37.2"	""	"43.1"	""	"50.7"	"43.3"	""	"556"	"27"	"34.000"	"27.000"	"0.0598473322253375"	"26"	"0.0007829"	"0.009491"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQEVAELR"	"[R].vQEVAELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"586.84491"	"1172.68254"	"1172.68365"	"-0.95"	"-0.00056"	"5/74"	"5"	"74"	"894215.410461426"	"HCD"	"MS2"	"10.79039"	"47.7"	"100.000"	"54.1819"	"17044"	"17044"	"17017"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.3"	""	"57.0"	""	"59.3"	""	"86.3"	""	"101.4"	"89.1"	""	"556"	"24"	"34.000"	"27.000"	"0.0993218490062362"	""	"0.003449"	"0.03487"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAEELLAR"	"[R].aAAEELLAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVR3"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Rattus norvegicus OX=10116 GN=Inppl1 PE=1 SV=1"	"Q9WVR3"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Rattus norvegicus OX=10116 GN=Inppl1 PE=1 SV=1"	"0"	"2"	"2"	"0.3548"	"0.0000"	"1"	"1"	"1"	"586.84491"	"1172.68254"	"1172.68365"	"-0.95"	"-0.00056"	"7/66"	"7"	"66"	"980736.156921387"	"HCD"	"MS2"	"39.93648"	"54.8"	"100.000"	"59.7046"	"19279"	"19279"	"19254"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.1"	""	"69.8"	""	"66.1"	""	"97.7"	""	"105.1"	"116.8"	""	"556"	"31"	"34.000"	"27.000"	"0.0200006815885028"	""	"0"	"0.0006652"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEELGQR"	"[R].vLEELGQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"586.84503"	"1172.68279"	"1172.68365"	"-0.74"	"-0.00043"	"7/60"	"7"	"60"	"1609464.77081299"	"HCD"	"MS2"	"3.423059"	"80.1"	"100.000"	"63.8299"	"20920"	"20920"	"20903"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"113.8"	""	"94.0"	""	"109.9"	""	"144.2"	"2.0"	"154.0"	"140.9"	""	"595"	"27"	"34.000"	"27.000"	"0.0556527936758826"	"23"	"0.0006732"	"0.009218"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEVALLER"	"[K].nEVALLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"0"	"2"	"2"	"0.6078"	"0.0000"	"1"	"1"	"1"	"586.84503"	"1172.68279"	"1172.68365"	"-0.74"	"-0.00043"	"6/80"	"6"	"80"	"4988219.12286377"	"HCD"	"MS2"	"2.868212"	"200.9"	"100.000"	"58.1026"	"18640"	"18640"	"18623"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"213.8"	""	"197.0"	""	"236.0"	""	"360.9"	""	"434.7"	"470.9"	""	"595"	"51"	"34.000"	"27.000"	"0.000260907744290232"	""	"0"	"0.001616"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEELGQR"	"[R].vLEELGQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"586.84509"	"1172.68291"	"1172.68365"	"-0.63"	"-0.00037"	"6/60"	"6"	"60"	"2231115.91693115"	"HCD"	"MS2"	"7.400473"	"93.5"	"100.000"	"63.4573"	"20782"	"20782"	"20763"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"136.3"	""	"123.4"	""	"137.0"	""	"153.5"	"3.7"	"171.6"	"160.0"	""	"593"	"24"	"34.000"	"27.000"	"0.120233280760446"	"20"	"0.0008629"	"0.009967"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEELGQR"	"[R].vLEELGQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"586.84521"	"1172.68315"	"1172.68365"	"-0.43"	"-0.00025"	"7/60"	"7"	"60"	"1372932.86761475"	"HCD"	"MS2"	"3.492336"	"68.5"	"100.000"	"63.7595"	"20905"	"20905"	"20885"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"100.9"	""	"86.4"	""	"93.0"	""	"119.3"	"1.1"	"126.1"	"121.8"	""	"592"	"29"	"34.000"	"27.000"	"0.0354235197266944"	"25"	"0.0002479"	"0.005827"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQEVAELR"	"[R].vQEVAELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"586.84534"	"1172.68340"	"1172.68365"	"-0.22"	"-0.00013"	"5/74"	"5"	"74"	"1682229.85314941"	"HCD"	"MS2"	"10.29624"	"79.8"	"100.000"	"54.0995"	"16999"	"16999"	"16976"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"102.3"	""	"101.8"	""	"112.0"	""	"123.9"	""	"153.9"	"163.7"	""	"591"	"33"	"34.000"	"27.000"	"0.0135069560031196"	""	"0.0001301"	"0.004313"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEVALLER"	"[K].nEVALLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"586.84534"	"1172.68340"	"1172.68365"	"-0.22"	"-0.00013"	"6/80"	"6"	"80"	"4798365.23895264"	"HCD"	"MS2"	"3.390792"	"192.0"	"100.000"	"58.2958"	"18704"	"18704"	"18687"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"219.2"	""	"179.5"	""	"230.4"	""	"334.7"	""	"415.3"	"452.6"	""	"591"	"51"	"34.000"	"27.000"	"0.000262758930327024"	""	"0"	"0.002311"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALLDQIR"	"[R].dALLDQIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"O08816"	"Neural Wiskott-Aldrich syndrome protein OS=Rattus norvegicus OX=10116 GN=Wasl PE=1 SV=2"	"O08816"	"Neural Wiskott-Aldrich syndrome protein OS=Rattus norvegicus OX=10116 GN=Wasl PE=1 SV=2"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"586.84552"	"1172.68376"	"1172.68365"	"0.09"	"0.00006"	"6/68"	"6"	"68"	"644646.148254395"	"HCD"	"MS2"	"27.14845"	"28.2"	"100.000"	"71.0771"	"23868"	"23868"	"23845"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.5"	""	"31.3"	""	"41.4"	""	"50.0"	"0.3"	"55.2"	"54.8"	""	"594"	"14"	"34.000"	"27.000"	"1.26402728700722"	"22"	"0.005829"	"0.06476"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQEVAELR"	"[R].vQEVAELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"0"	"2"	"2"	"0.6122"	"0.0000"	"1"	"1"	"1"	"586.84552"	"1172.68376"	"1172.68365"	"0.09"	"0.00006"	"6/74"	"6"	"74"	"1840516.91363525"	"HCD"	"MS2"	"12.44319"	"84.1"	"100.000"	"53.8759"	"16919"	"16919"	"16892"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"119.0"	""	"111.5"	""	"105.9"	""	"137.7"	"0.4"	"158.5"	"164.5"	""	"594"	"49"	"34.000"	"27.000"	"0.000350555228788564"	""	"0"	"0.001619"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEELGQR"	"[R].vLEELGQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"586.84558"	"1172.68389"	"1172.68365"	"0.20"	"0.00012"	"6/60"	"6"	"60"	"1699363.11022949"	"HCD"	"MS2"	"8.006963"	"76.5"	"100.000"	"63.5352"	"20799"	"20799"	"20779"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"127.1"	""	"80.8"	""	"103.9"	""	"142.8"	"1.1"	"134.9"	"133.3"	""	"594"	"23"	"34.000"	"27.000"	"0.160974264449282"	"20"	"0.0008629"	"0.0107"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEVALLER"	"[K].nEVALLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"0"	"2"	"2"	"0.6600"	"0.0000"	"1"	"1"	"1"	"586.84583"	"1172.68437"	"1172.68365"	"0.61"	"0.00036"	"6/80"	"6"	"80"	"2221258.51184082"	"HCD"	"MS2"	"5.135674"	"92.4"	"100.000"	"57.7986"	"18515"	"18515"	"18495"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"100.0"	""	"94.6"	""	"103.9"	""	"165.3"	""	"210.7"	"206.1"	""	"591"	"50"	"34.000"	"27.000"	"0.000286126106525199"	""	"0"	"0.001692"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEVALLER"	"[K].nEVALLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"0"	"2"	"2"	"0.6600"	"0.0000"	"1"	"1"	"1"	"586.84595"	"1172.68462"	"1172.68365"	"0.82"	"0.00048"	"6/80"	"6"	"80"	"2223818.51300049"	"HCD"	"MS2"	"0"	"97.8"	"100.000"	"57.9984"	"18582"	"18582"	"18559"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"102.2"	""	"112.4"	""	"112.0"	""	"176.1"	""	"212.5"	"217.6"	""	"591"	"50"	"34.000"	"27.000"	"0.000294820368859565"	""	"0"	"0.002701"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFGGTEDR"	"[R].yFGGTEDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"587.28979"	"1173.57231"	"1173.57377"	"-1.24"	"-0.00073"	"7/60"	"7"	"60"	"3825288.3729248"	"HCD"	"MS2"	"1.876041"	"203.4"	"100.000"	"39.2988"	"10984"	"10984"	"10962"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"359.4"	""	"258.5"	""	"321.6"	""	"307.0"	""	"318.4"	"361.2"	""	"332"	"50"	"32.000"	"25.000"	"0.000149660808842589"	"22"	"0"	"0.003802"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFGGTEDR"	"[R].yFGGTEDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"587.29010"	"1173.57292"	"1173.57377"	"-0.72"	"-0.00042"	"7/60"	"7"	"60"	"3423832.2401123"	"HCD"	"MS2"	"1.960645"	"186.2"	"100.000"	"39.4743"	"11046"	"11046"	"11025"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"316.5"	""	"228.9"	""	"294.1"	""	"269.0"	""	"308.1"	"348.6"	""	"326"	"50"	"32.000"	"25.000"	"0.000154236657302624"	"22"	"0"	"0.001127"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDEGHPFR"	"[K].sDEGHPFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"391.86609"	"1173.58371"	"1173.58500"	"-1.10"	"-0.00043"	"6/60"	"6"	"60"	"11432538.588623"	"HCD"	"MS2"	"29.11252"	"362.3"	"96.134"	"22.1581"	"4045"	"4045"	"4019"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"483.5"	""	"430.4"	""	"449.8"	""	"622.5"	""	"705.6"	"752.1"	""	"402"	"35"	"33.000"	"26.000"	"0.00700158003222384"	"20"	"0.001374"	"0.01766"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDEGHPFR"	"[K].sDEGHPFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"587.29553"	"1173.58379"	"1173.58500"	"-1.03"	"-0.00061"	"7/60"	"7"	"60"	"2221667.36730957"	"HCD"	"MS2"	"7.009498"	"102.4"	"100.000"	"22.1925"	"4059"	"4059"	"4035"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"135.6"	""	"117.3"	""	"124.4"	""	"182.5"	"2.3"	"200.9"	"208.6"	""	"402"	"27"	"33.000"	"26.000"	"0.036999517229526"	"19"	"0.0004639"	"0.00764"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDEGHPFR"	"[K].sDEGHPFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"3"	"3"	"0.8378"	"0.0000"	"1"	"1"	"1"	"391.86633"	"1173.58445"	"1173.58500"	"-0.47"	"-0.00019"	"6/60"	"6"	"60"	"11142883.3762207"	"HCD"	"MS2"	"36.80748"	"361.1"	"100.000"	"22.1881"	"4040"	"4040"	"4012"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"473.2"	""	"409.0"	""	"464.6"	""	"638.8"	""	"705.8"	"737.7"	""	"399"	"37"	"32.000"	"26.000"	"0.00445597658454691"	"21"	"0.0003538"	"0.006744"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDEGHPFR"	"[K].sDEGHPFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"587.29590"	"1173.58452"	"1173.58500"	"-0.41"	"-0.00024"	"7/60"	"7"	"60"	"2211496.25378418"	"HCD"	"MS2"	"0"	"94.1"	"100.000"	"22.2179"	"4052"	"4052"	"4028"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"124.0"	""	"114.2"	""	"121.2"	""	"160.4"	""	"178.5"	"196.9"	""	"399"	"28"	"32.000"	"26.000"	"0.0286380141954054"	"18"	"0.0002479"	"0.005947"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SESELQLVAR"	"[M].sESELQLVAR.[R]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"587.30225"	"1173.59722"	"1173.61099"	"-11.74"	"-0.00689"	"8/86"	"8"	"86"	"1034353.59759521"	"HCD"	"MS2"	"22.91878"	"37.2"	"100.000"	"76.4448"	"26053"	"26053"	"26034"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"86.9"	""	"59.6"	""	"49.7"	""	"61.6"	""	"42.8"	"51.6"	"NoQuanLabels"	"462"	"18"	"33.000"	"26.000"	"0.364428203300549"	"14"	"0.003449"	"0.0333"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SESELQLVAR"	"[M].sESELQLVAR.[R]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"587.30292"	"1173.59856"	"1173.61099"	"-10.60"	"-0.00622"	"8/86"	"8"	"86"	"927968.402282715"	"HCD"	"MS2"	"24.6446"	"30.7"	"100.000"	"76.5568"	"26090"	"26090"	"26072"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"72.4"	""	"49.1"	""	"41.8"	""	"52.8"	""	"30.6"	"43.6"	"NoQuanLabels"	"449"	"18"	"33.000"	"26.000"	"0.338233286358924"	"17"	"0.003507"	"0.03617"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDALLINPR"	"[K].DFDALLINPR.[A]"	""	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"587.31635"	"1173.62541"	"1173.62625"	"-0.71"	"-0.00042"	"8/80"	"8"	"80"	"241706.502563477"	"HCD"	"MS2"	"28.9616"	"5.6"	"100.000"	"94.0106"	"32940"	"32940"	"32930"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.8"	""	"7.1"	""	"6.3"	""	"8.7"	""	"13.2"	"10.8"	"NoQuanLabels"	"617"	"46"	"34.000"	"27.000"	"0.000767812482690117"	"22"	"0"	"0.001438"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDALLINPR"	"[K].DFDALLINPR.[A]"	""	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"587.31659"	"1173.62590"	"1173.62625"	"-0.30"	"-0.00017"	"8/80"	"8"	"80"	"403377.996154785"	"HCD"	"MS2"	"17.55107"	"6.9"	"100.000"	"93.7309"	"32840"	"32840"	"32831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.2"	""	"9.0"	""	"8.2"	""	"11.2"	""	"15.9"	"13.2"	"NoQuanLabels"	"605"	"46"	"34.000"	"27.000"	"0.00068190736167611"	"15"	"0"	"0.002513"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDALLINPR"	"[K].DFDALLINPR.[A]"	""	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"587.31659"	"1173.62590"	"1173.62625"	"-0.30"	"-0.00017"	"8/80"	"8"	"80"	"395505.684936523"	"HCD"	"MS2"	"18.40994"	"6.4"	"100.000"	"93.7372"	"32859"	"32859"	"32846"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.6"	""	"11.1"	""	"11.3"	""	"10.9"	""	"12.0"	"10.1"	"NoQuanLabels"	"605"	"53"	"34.000"	"27.000"	"0.000144120373508638"	"16"	"0"	"0.002065"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDALLINPR"	"[K].DFDALLINPR.[A]"	""	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"587.31665"	"1173.62602"	"1173.62625"	"-0.19"	"-0.00011"	"8/80"	"8"	"80"	"229055.127746582"	"HCD"	"MS2"	"18.28456"	"5.3"	"100.000"	"94.0155"	"32960"	"32960"	"32947"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.1"	""	"4.5"	""	"7.2"	""	"7.7"	""	"13.8"	"10.2"	"NoQuanLabels"	"605"	"37"	"34.000"	"27.000"	"0.00564579856477488"	"15"	"0"	"0.002649"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPAQSASR"	"[K].lDPAQSASR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"587.32458"	"1173.64189"	"1173.64252"	"-0.53"	"-0.00031"	"8/84"	"8"	"84"	"3969310.54168701"	"HCD"	"MS2"	"3.807633"	"192.6"	"100.000"	"31.5677"	"7841"	"7841"	"7821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"263.5"	""	"231.9"	""	"246.1"	""	"255.4"	"6.9"	"394.2"	"431.5"	""	"615"	"48"	"34.000"	"27.000"	"0.000507978252955423"	"20"	"0"	"0.0002966"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPAQSASR"	"[K].lDPAQSASR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"587.32495"	"1173.64263"	"1173.64252"	"0.09"	"0.00005"	"8/84"	"8"	"84"	"3963120.32946777"	"HCD"	"MS2"	"0"	"188.3"	"100.000"	"31.5461"	"7842"	"7842"	"7820"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"239.5"	""	"235.6"	""	"239.3"	""	"255.6"	"4.3"	"375.2"	"439.1"	""	"622"	"47"	"34.000"	"27.000"	"0.000648276664643256"	"20"	"0"	"0.000269"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDEEIALR"	"[R].vDEEIALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P20651"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1"	"P20651"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"587.33679"	"1173.66631"	"1173.66767"	"-1.16"	"-0.00068"	"7/60"	"7"	"60"	"1032787.13641357"	"HCD"	"MS2"	"0"	"50.5"	"100.000"	"60.3355"	"19507"	"19507"	"19501"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.6"	""	"60.5"	""	"71.7"	""	"83.2"	""	"105.2"	"102.8"	""	"667"	"28"	"35.000"	"28.000"	"0.0553472233630427"	""	"0.0003538"	"0.007088"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDEEIALR"	"[R].vDEEIALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P20651"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1"	"P20651"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"587.33698"	"1173.66667"	"1173.66767"	"-0.85"	"-0.00050"	"11/60"	"11"	"60"	"901156.772644043"	"HCD"	"MS2"	"0"	"46.1"	"100.000"	"60.1769"	"19455"	"19455"	"19441"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.9"	""	"48.0"	""	"61.1"	""	"89.8"	""	"93.3"	"91.0"	""	"754"	"28"	"35.000"	"28.000"	"0.0638765350768643"	"27"	"0.0004639"	"0.007824"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALEEVER"	"[K].vALEEVER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"587.33728"	"1173.66728"	"1173.66767"	"-0.33"	"-0.00019"	"7/62"	"7"	"62"	"1611553.72033691"	"HCD"	"MS2"	"0"	"79.3"	"100.000"	"53.4316"	"16737"	"16737"	"16716"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.4"	""	"104.9"	""	"118.7"	""	"111.8"	"4.1"	"146.4"	"152.0"	""	"758"	"33"	"35.000"	"28.000"	"0.0200280750422793"	"27"	"0.0002479"	"0.005668"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALEEVER"	"[K].vALEEVER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"587.33746"	"1173.66765"	"1173.66767"	"-0.02"	"-0.00001"	"7/62"	"7"	"62"	"1454820.32763672"	"HCD"	"MS2"	"5.938161"	"69.4"	"100.000"	"53.7429"	"16853"	"16853"	"16833"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.6"	""	"99.1"	""	"100.8"	""	"96.1"	""	"127.8"	"129.6"	""	"758"	"21"	"35.000"	"28.000"	"0.313790080046975"	"20"	"0.000936"	"0.0113"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEALELIK"	"[R].qEALELIk.[K]"	"Q1(Deamidated); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"587.34979"	"1173.69231"	"1173.69282"	"-0.44"	"-0.00026"	"5/76"	"5"	"76"	"335120.836547852"	"HCD"	"MS2"	"45.52239"	"11.4"	"100.000"	"109.5929"	"38156"	"38156"	"38148"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.8"	""	"15.0"	""	"13.5"	""	"25.5"	""	"12.6"	"21.6"	""	"818"	"31"	"36.000"	"29.000"	"0.0310973447268534"	"28"	"0.0007829"	"0.00944"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEALELIK"	"[R].qEALELIk.[K]"	"Q1(Deamidated); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.4062"	"0.0000"	"1"	"1"	"1"	"587.34979"	"1173.69231"	"1173.69282"	"-0.44"	"-0.00026"	"5/76"	"5"	"76"	"347335.114624023"	"HCD"	"MS2"	"37.11729"	"11.4"	"100.000"	"109.5382"	"38236"	"38236"	"38230"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.7"	""	"15.6"	""	"14.6"	""	"18.8"	""	"13.8"	"21.2"	""	"818"	"32"	"36.000"	"29.000"	"0.0245880058630661"	""	"0.0004639"	"0.007938"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFNSYGSR"	"[R].dFNSYGSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"587.78748"	"1174.56767"	"1174.56902"	"-1.14"	"-0.00067"	"6/78"	"6"	"78"	"3725398.49584961"	"HCD"	"MS2"	"21.26558"	"201.5"	"100.000"	"36.5851"	"9883"	"9883"	"9864"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"339.9"	""	"300.6"	""	"309.3"	""	"265.4"	"0.6"	"344.8"	"345.3"	""	"288"	"33"	"31.000"	"24.000"	"0.00658206993045421"	"16"	"0.0002479"	"0.005401"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFNSYGSR"	"[R].dFNSYGSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"587.78778"	"1174.56828"	"1174.56902"	"-0.62"	"-0.00037"	"6/78"	"6"	"78"	"2969860.57427979"	"HCD"	"MS2"	"42.94836"	"178.8"	"100.000"	"36.7195"	"9932"	"9932"	"9912"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"286.5"	""	"247.3"	""	"267.3"	""	"268.0"	""	"315.3"	"311.2"	""	"288"	"23"	"31.000"	"24.000"	"0.0698815440233455"	"21"	"0.0003538"	"0.006298"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HYEVEIR"	"[K].hYEVEIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"0"	"3"	"3"	"0.3929"	"0.0000"	"1"	"1"	"1"	"392.21863"	"1174.64133"	"1174.64179"	"-0.39"	"-0.00015"	"6/52"	"6"	"52"	"4120400.60931396"	"HCD"	"MS2"	"29.20339"	"69.1"	"100.000"	"35.3309"	"9369"	"9369"	"9346"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"92.7"	""	"88.8"	""	"97.1"	""	"109.6"	""	"132.1"	"135.8"	""	"752"	"28"	"35.000"	"28.000"	"0.0551045988199423"	""	"0.003717"	"0.03868"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNQTVAALK"	"[K].VnqTVAALk.[A]"	"N2(Deamidated); Q3(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q5XI96"	"Ribonuclease H2 subunit B OS=Rattus norvegicus OX=10116 GN=Rnaseh2b PE=2 SV=1"	"Q5XI96"	"Ribonuclease H2 subunit B OS=Rattus norvegicus OX=10116 GN=Rnaseh2b PE=2 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"587.84747"	"1174.68767"	"1174.68807"	"-0.34"	"-0.00020"	"5/78"	"5"	"78"	"288568.384521484"	"HCD"	"MS2"	"23.64057"	"11.2"	"100.000"	"95.9134"	"33626"	"33626"	"33620"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.4"	""	"16.6"	""	"15.4"	""	"18.9"	""	"19.5"	"23.2"	""	"773"	"31"	"35.000"	"28.000"	"0.0289834111906994"	"22"	"0.008052"	"0.09835"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINNPDMR"	"[K].sINNPDMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"588.30511"	"1175.60295"	"1175.60402"	"-0.91"	"-0.00053"	"5/76"	"5"	"76"	"3471063.01419067"	"HCD"	"MS2"	"15.4971"	"186.1"	"100.000"	"32.8047"	"8352"	"8352"	"8336"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"290.2"	""	"252.7"	""	"279.6"	""	"232.6"	""	"309.4"	"399.7"	""	"513"	"38"	"34.000"	"27.000"	"0.00376779590215652"	"20"	"0.000936"	"0.01285"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINNPDMR"	"[K].sINNPDMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"588.30560"	"1175.60393"	"1175.60402"	"-0.08"	"-0.00005"	"5/76"	"5"	"76"	"1828860.8269043"	"HCD"	"MS2"	"21.81857"	"108.2"	"100.000"	"32.8877"	"8380"	"8380"	"8360"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"167.6"	""	"136.6"	""	"150.3"	""	"147.0"	""	"188.7"	"234.6"	""	"544"	"32"	"34.000"	"27.000"	"0.0174409004831164"	"19"	"0.002467"	"0.02492"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINNPDMR"	"[K].sINNPDMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"588.30585"	"1175.60442"	"1175.60402"	"0.34"	"0.00020"	"7/76"	"7"	"76"	"4810084.88793945"	"HCD"	"MS2"	"32.00806"	"229.1"	"100.000"	"32.5243"	"8239"	"8239"	"8211"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"374.9"	""	"294.2"	""	"321.2"	""	"276.1"	"2.1"	"391.2"	"511.2"	""	"548"	"40"	"34.000"	"27.000"	"0.00255123557878185"	"21"	"0"	"0.002773"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINNPDMR"	"[K].sINNPDMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"588.30603"	"1175.60478"	"1175.60402"	"0.65"	"0.00038"	"5/76"	"5"	"76"	"6235802.24456787"	"HCD"	"MS2"	"19.6773"	"296.5"	"100.000"	"32.5776"	"8254"	"8254"	"8227"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"510.1"	""	"388.3"	""	"421.7"	""	"360.1"	""	"486.1"	"642.8"	""	"559"	"39"	"34.000"	"27.000"	"0.0033836217832736"	"21"	"0.0002479"	"0.005108"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVPGQESSR"	"[R].sVPGQESSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"588.31433"	"1175.62139"	"1175.62178"	"-0.34"	"-0.00020"	"7/86"	"7"	"86"	"2817772.7401123"	"HCD"	"MS2"	"0"	"131.1"	"100.000"	"22.4197"	"4151"	"4151"	"4126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"184.3"	""	"138.3"	""	"160.5"	""	"223.9"	"0.7"	"274.2"	"262.6"	""	"632"	"32"	"34.000"	"28.000"	"0.0206389254636601"	"22"	"0"	"0.001211"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVPGQESSR"	"[R].sVPGQESSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"588.31458"	"1175.62187"	"1175.62178"	"0.08"	"0.00005"	"8/86"	"8"	"86"	"3107565.33673096"	"HCD"	"MS2"	"0"	"132.9"	"100.000"	"22.4955"	"4165"	"4165"	"4142"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"193.5"	""	"155.2"	""	"162.0"	""	"233.5"	"2.7"	"253.5"	"259.8"	""	"654"	"33"	"35.000"	"28.000"	"0.0149812396955652"	"19"	"0.001036"	"0.01347"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSEIAQR"	"[K].eLSEIAqR.[I]"	"N-Term(TMT6plex); Q7(Deamidated)"	"1"	"1"	"P00884"	"Fructose-bisphosphate aldolase B OS=Rattus norvegicus OX=10116 GN=Aldob PE=1 SV=2"	"P00884"	"Fructose-bisphosphate aldolase B OS=Rattus norvegicus OX=10116 GN=Aldob PE=1 SV=2"	"0"	"2"	"2"	"0.2632"	"0.0000"	"1"	"1"	"1"	"588.32666"	"1175.64604"	"1175.64693"	"-0.76"	"-0.00044"	"4/64"	"4"	"64"	"1133541.01062012"	"HCD"	"MS2"	"15.45718"	"68.0"	"100.000"	"50.3524"	"15481"	"15481"	"15464"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.0"	""	"69.5"	""	"79.4"	""	"83.5"	"2.4"	"202.6"	"142.2"	""	"796"	"19"	"35.000"	"29.000"	"0.490775723625106"	"28"	"0.008668"	"0.1096"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEELDTR"	"[R].lAEELDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.3654"	"0.0000"	"1"	"1"	"1"	"588.32672"	"1175.64617"	"1175.64693"	"-0.65"	"-0.00038"	"6/64"	"6"	"64"	"2080233.61608887"	"HCD"	"MS2"	"8.871608"	"106.8"	"100.000"	"53.5817"	"16787"	"16787"	"16770"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"154.5"	""	"113.4"	""	"127.2"	""	"190.3"	""	"226.2"	"209.4"	""	"794"	"52"	"35.000"	"28.000"	"0.000258696472442155"	""	"0"	"0.002277"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEELDTR"	"[R].lAEELDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.3654"	"0.0000"	"1"	"1"	"1"	"588.32678"	"1175.64629"	"1175.64693"	"-0.55"	"-0.00032"	"6/64"	"6"	"64"	"2115347.14984131"	"HCD"	"MS2"	"13.1279"	"107.7"	"100.000"	"53.3121"	"16688"	"16688"	"16669"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"160.4"	""	"111.3"	""	"146.5"	""	"189.7"	""	"214.0"	"201.2"	""	"794"	"52"	"35.000"	"28.000"	"0.000252807821800443"	""	"0"	"0.002265"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDSPAAK"	"[R].eDSPAAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"588.33630"	"1175.66533"	"1175.66722"	"-1.61"	"-0.00095"	"10/52"	"10"	"52"	"2965740.20483398"	"HCD"	"MS2"	"10.035"	"202.8"	"100.000"	"26.3400"	"5716"	"5716"	"5699"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"217.8"	""	"183.0"	""	"169.4"	""	"424.4"	""	"458.3"	"478.7"	""	"824"	"26"	"36.000"	"29.000"	"0.098604609163902"	"23"	"0.005309"	"0.06021"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDSPAAK"	"[R].eDSPAAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"588.33649"	"1175.66570"	"1175.66722"	"-1.30"	"-0.00076"	"10/52"	"10"	"52"	"3417857.52478027"	"HCD"	"MS2"	"8.366515"	"227.0"	"100.000"	"26.2573"	"5699"	"5699"	"5679"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"222.8"	""	"194.1"	""	"200.9"	""	"488.0"	""	"529.7"	"531.5"	""	"801"	"26"	"36.000"	"29.000"	"0.0967392064195197"	"25"	"0.005309"	"0.06011"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGDILGK"	"[R].dGDILGk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"588.35461"	"1175.70195"	"1175.70361"	"-1.41"	"-0.00083"	"6/52"	"6"	"52"	"1904935.37304688"	"HCD"	"MS2"	"25.23673"	"144.9"	"100.000"	"58.7818"	"18917"	"18917"	"18895"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"214.3"	""	"143.4"	""	"170.2"	""	"292.8"	""	"263.2"	"291.1"	""	"515"	"25"	"34.000"	"27.000"	"0.0909446662214289"	"23"	"0.003717"	"0.03819"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEAEAK"	"[R].iGEAEAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"0"	"2"	"2"	"0.2778"	"0.0000"	"1"	"1"	"1"	"588.35468"	"1175.70207"	"1175.70361"	"-1.31"	"-0.00077"	"6/52"	"6"	"52"	"2383947.31396484"	"HCD"	"MS2"	"25.60942"	"160.4"	"100.000"	"39.4351"	"11030"	"11030"	"11011"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"191.6"	"2.5"	"174.4"	""	"183.1"	""	"273.9"	""	"348.5"	"352.9"	""	"513"	"18"	"34.000"	"27.000"	"0.440643501305921"	"26"	"0.007602"	"0.08973"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGDILGK"	"[R].dGDILGk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"588.35498"	"1175.70268"	"1175.70361"	"-0.79"	"-0.00046"	"5/52"	"5"	"52"	"979521.778625488"	"HCD"	"MS2"	"19.84599"	"80.4"	"100.000"	"59.2648"	"19099"	"19099"	"19080"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"124.5"	""	"82.0"	""	"107.1"	""	"136.0"	""	"142.4"	"170.0"	""	"528"	"23"	"34.000"	"27.000"	"0.138868558327146"	"27"	"0.004942"	"0.05491"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLVDEK"	"[R].gGLVDEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q9EQH5"	"C-terminal-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ctbp2 PE=1 SV=2"	"Q9EQH5; Q9Z2F5"	"C-terminal-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ctbp2 PE=1 SV=2; C-terminal-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ctbp1 PE=1 SV=3"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"588.35504"	"1175.70281"	"1175.70361"	"-0.68"	"-0.00040"	"6/50"	"6"	"50"	"4192072.10247803"	"HCD"	"MS2"	"14.43917"	"312.1"	"100.000"	"43.1606"	"12547"	"12547"	"12524"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"483.7"	""	"381.4"	""	"413.2"	""	"515.8"	""	"590.3"	"575.8"	""	"528"	"34"	"34.000"	"27.000"	"0.010558541393693"	"24"	"0.003922"	"0.03936"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLVDEK"	"[R].gGLVDEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q9EQH5"	"C-terminal-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ctbp2 PE=1 SV=2"	"Q9EQH5; Q9Z2F5"	"C-terminal-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ctbp2 PE=1 SV=2; C-terminal-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ctbp1 PE=1 SV=3"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"588.35504"	"1175.70281"	"1175.70361"	"-0.68"	"-0.00040"	"6/50"	"6"	"50"	"3988186.02008057"	"HCD"	"MS2"	"21.83215"	"293.7"	"100.000"	"43.0272"	"12503"	"12503"	"12483"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"448.7"	""	"364.3"	""	"390.0"	""	"481.7"	""	"532.7"	"565.5"	""	"528"	"36"	"34.000"	"27.000"	"0.00733844302688452"	"25"	"0.003111"	"0.03067"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDDIAK"	"[K].vGDDIAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P23358"	"60S ribosomal protein L12 OS=Rattus norvegicus OX=10116 GN=Rpl12 PE=2 SV=1"	"P23358"	"60S ribosomal protein L12 OS=Rattus norvegicus OX=10116 GN=Rpl12 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"588.35510"	"1175.70293"	"1175.70361"	"-0.58"	"-0.00034"	"10/50"	"10"	"50"	"5363398.70385742"	"HCD"	"MS2"	"11.0655"	"361.0"	"100.000"	"46.6568"	"13974"	"13974"	"13959"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"504.5"	""	"447.0"	""	"486.9"	""	"591.1"	""	"708.1"	"686.5"	""	"528"	"26"	"34.000"	"27.000"	"0.0705673691887114"	"27"	"0.005309"	"0.06048"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGDILGK"	"[R].dGDILGk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"588.35516"	"1175.70305"	"1175.70361"	"-0.48"	"-0.00028"	"6/52"	"6"	"52"	"1622068.18096924"	"HCD"	"MS2"	"51.94764"	"123.6"	"100.000"	"58.9587"	"18974"	"18974"	"18952"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"167.5"	""	"126.8"	""	"144.7"	""	"233.3"	""	"254.6"	"247.8"	""	"528"	"24"	"34.000"	"27.000"	"0.104136727747874"	"22"	"0.002547"	"0.02517"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAAEAIK"	"[K].dAAEAIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.4857"	"0.0000"	"1"	"1"	"1"	"588.35535"	"1175.70342"	"1175.70361"	"-0.16"	"-0.00010"	"6/54"	"6"	"54"	"7627610.86236572"	"HCD"	"MS2"	"0"	"545.3"	"100.000"	"41.3763"	"11819"	"11819"	"11802"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"776.3"	""	"560.6"	""	"651.8"	""	"849.9"	"9.1"	"1183.7"	"1148.3"	""	"528"	"35"	"34.000"	"27.000"	"0.00900749286681891"	""	"0.003449"	"0.0327"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDDIAK"	"[K].vGDDIAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P23358"	"60S ribosomal protein L12 OS=Rattus norvegicus OX=10116 GN=Rpl12 PE=2 SV=1"	"P23358"	"60S ribosomal protein L12 OS=Rattus norvegicus OX=10116 GN=Rpl12 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"588.35559"	"1175.70391"	"1175.70361"	"0.25"	"0.00015"	"10/50"	"10"	"50"	"4846741.15411377"	"HCD"	"MS2"	"8.670848"	"329.5"	"100.000"	"46.8244"	"14031"	"14031"	"14018"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"496.5"	""	"387.8"	""	"430.9"	""	"560.1"	""	"638.5"	"613.5"	""	"535"	"26"	"34.000"	"27.000"	"0.0733371090990709"	"27"	"0.005119"	"0.05789"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGDILGK"	"[R].dGDILGk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"588.35565"	"1175.70403"	"1175.70361"	"0.36"	"0.00021"	"5/52"	"5"	"52"	"789645.39050293"	"HCD"	"MS2"	"12.14027"	"67.6"	"100.000"	"59.0927"	"19044"	"19044"	"19021"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"84.8"	""	"85.3"	""	"82.6"	""	"114.6"	""	"121.4"	"153.3"	""	"535"	"22"	"34.000"	"27.000"	"0.156791959007503"	"24"	"0.003449"	"0.03335"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAAEAIK"	"[K].dAAEAIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"588.35571"	"1175.70415"	"1175.70361"	"0.46"	"0.00027"	"6/54"	"6"	"54"	"5450587.96057129"	"HCD"	"MS2"	"5.103348"	"391.9"	"100.000"	"41.2700"	"11786"	"11786"	"11769"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"479.2"	""	"372.5"	""	"391.4"	""	"530.4"	""	"1074.9"	"897.7"	""	"532"	"24"	"34.000"	"27.000"	"0.107122731130572"	"25"	"0.005617"	"0.06355"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWGPDYPR"	"[K].gWGPDYPR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"O70437"	"Mothers against decapentaplegic homolog 4 OS=Rattus norvegicus OX=10116 GN=Smad4 PE=1 SV=1"	"O70437"	"Mothers against decapentaplegic homolog 4 OS=Rattus norvegicus OX=10116 GN=Smad4 PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"588.80139"	"1176.59551"	"1176.59992"	"-3.75"	"-0.00221"	"6/56"	"6"	"56"	"1231583.88012695"	"HCD"	"MS2"	"49.5085"	"76.5"	"100.000"	"54.5739"	"17201"	"17201"	"17177"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"108.0"	""	"102.2"	""	"87.1"	""	"139.2"	"2.7"	"136.1"	"149.5"	""	"484"	"20"	"33.000"	"26.000"	"0.237583002210836"	"20"	"0.003111"	"0.03098"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVTSVDAAFR"	"[K].NPVTSVDAAFR.[G]"	""	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"588.80371"	"1176.60015"	"1176.60076"	"-0.52"	"-0.00031"	"9/106"	"9"	"106"	"1130357.75170898"	"HCD"	"MS2"	"17.48718"	"37.5"	"100.000"	"52.8654"	"16506"	"16506"	"16481"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.1"	""	"56.7"	""	"43.6"	""	"59.5"	""	"75.3"	"74.1"	"NoQuanLabels"	"509"	"45"	"34.000"	"27.000"	"0.000763286861082358"	"15"	"0"	"0.0024"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVTSVDAAFR"	"[K].NPVTSVDAAFR.[G]"	""	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"588.80402"	"1176.60076"	"1176.60076"	"-0.01"	"0.00000"	"9/106"	"9"	"106"	"1110779.13659668"	"HCD"	"MS2"	"40.30437"	"40.8"	"100.000"	"53.1378"	"16606"	"16606"	"16579"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.0"	""	"56.7"	""	"51.7"	""	"63.4"	""	"72.5"	"76.3"	"NoQuanLabels"	"509"	"40"	"34.000"	"27.000"	"0.00256264109722784"	"15"	"0"	"0.0009814"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENITEWR"	"[R].eNITEWR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P09330"	"Ribose-phosphate pyrophosphokinase 2 OS=Rattus norvegicus OX=10116 GN=Prps2 PE=1 SV=3"	"P09330"	"Ribose-phosphate pyrophosphokinase 2 OS=Rattus norvegicus OX=10116 GN=Prps2 PE=1 SV=3"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"588.81372"	"1176.62016"	"1176.62105"	"-0.75"	"-0.00044"	"6/66"	"6"	"66"	"1348518.62762451"	"HCD"	"MS2"	"0"	"71.1"	"100.000"	"54.2210"	"17060"	"17060"	"17033"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"117.4"	""	"87.4"	""	"89.1"	""	"123.2"	""	"121.4"	"134.9"	""	"754"	"23"	"35.000"	"28.000"	"0.179614482025642"	"27"	"0.007627"	"0.0936"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENITEWR"	"[R].eNITEWR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P09330"	"Ribose-phosphate pyrophosphokinase 2 OS=Rattus norvegicus OX=10116 GN=Prps2 PE=1 SV=3"	"P09330"	"Ribose-phosphate pyrophosphokinase 2 OS=Rattus norvegicus OX=10116 GN=Prps2 PE=1 SV=3"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"588.81396"	"1176.62065"	"1176.62105"	"-0.34"	"-0.00020"	"4/66"	"4"	"66"	"1848129.83520508"	"HCD"	"MS2"	"10.45298"	"93.5"	"100.000"	"54.4737"	"17148"	"17148"	"17120"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"150.2"	""	"106.8"	""	"120.7"	""	"168.5"	""	"168.7"	"177.5"	""	"745"	"21"	"35.000"	"28.000"	"0.319246597348312"	"25"	"0.00736"	"0.0856"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFPNTNR"	"[R].qAFPNTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"588.81958"	"1176.63188"	"1176.63229"	"-0.34"	"-0.00020"	"6/70"	"6"	"70"	"837852.13079834"	"HCD"	"MS2"	"0"	"76.5"	"100.000"	"30.3519"	"7360"	"7360"	"7337"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"101.9"	""	"81.1"	""	"98.0"	""	"140.6"	""	"147.7"	"156.5"	""	"777"	"30"	"35.000"	"28.000"	"0.0386715004641068"	"25"	"0.007279"	"0.0832"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFPNTNR"	"[R].qAFPNTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"588.81970"	"1176.63213"	"1176.63229"	"-0.13"	"-0.00008"	"4/70"	"4"	"70"	"3509386.4541626"	"HCD"	"MS2"	"43.42771"	"184.3"	"100.000"	"30.0633"	"7231"	"7231"	"7213"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"289.3"	""	"219.9"	""	"240.9"	""	"333.3"	""	"341.4"	"321.0"	""	"777"	"19"	"35.000"	"28.000"	"0.462797520118635"	"21"	"0.004022"	"0.04273"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFPNTNR"	"[R].qAFPNTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"588.81982"	"1176.63237"	"1176.63229"	"0.07"	"0.00004"	"6/70"	"6"	"70"	"942271.89276123"	"HCD"	"MS2"	"0"	"77.0"	"100.000"	"30.3614"	"7352"	"7352"	"7330"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"109.5"	""	"87.4"	""	"88.4"	""	"142.8"	""	"149.9"	"153.7"	""	"781"	"35"	"35.000"	"28.000"	"0.0128121211960673"	""	"0.009658"	"0.1273"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFPNTNR"	"[R].qAFPNTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"588.81989"	"1176.63249"	"1176.63229"	"0.18"	"0.00010"	"7/70"	"7"	"70"	"3845414.20507813"	"HCD"	"MS2"	"47.21435"	"194.7"	"100.000"	"30.0514"	"7238"	"7238"	"7216"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"301.2"	"2.5"	"234.4"	""	"257.2"	""	"338.4"	""	"361.8"	"353.9"	""	"781"	"22"	"35.000"	"28.000"	"0.229943447416358"	"21"	"0.004942"	"0.05276"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEISGDLAR"	"[K].sEISGDLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.4898"	"0.0000"	"1"	"1"	"1"	"588.82434"	"1176.64141"	"1176.64218"	"-0.66"	"-0.00039"	"8/74"	"8"	"74"	"4879915.57354736"	"HCD"	"MS2"	"18.7846"	"234.1"	"100.000"	"40.3399"	"11409"	"11409"	"11383"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"324.6"	""	"285.6"	""	"324.7"	""	"403.3"	"1.2"	"433.4"	"445.5"	""	"798"	"49"	"36.000"	"29.000"	"0.000479703509412348"	""	"0"	"0.0006348"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEISGDLAR"	"[K].sEISGDLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.5610"	"0.0000"	"1"	"1"	"1"	"588.82434"	"1176.64141"	"1176.64218"	"-0.66"	"-0.00039"	"8/74"	"8"	"74"	"25516716.6484375"	"HCD"	"MS2"	"7.962431"	"481.4"	"37.138"	"40.6550"	"11537"	"11537"	"11519"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"687.8"	""	"624.7"	""	"635.3"	""	"835.8"	""	"874.1"	"911.1"	""	"798"	"41"	"36.000"	"29.000"	"0.00328074817328881"	""	"0"	"0.001618"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEISGDLAR"	"[K].sEISGDLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.5098"	"0.0000"	"1"	"1"	"1"	"588.82440"	"1176.64153"	"1176.64218"	"-0.56"	"-0.00033"	"8/74"	"8"	"74"	"29710948.7393799"	"HCD"	"MS2"	"0"	"500.4"	"38.735"	"40.7684"	"11574"	"11574"	"11557"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"729.8"	""	"635.2"	""	"712.3"	""	"836.9"	""	"877.7"	"952.6"	""	"796"	"51"	"35.000"	"29.000"	"0.000328763103931717"	""	"0"	"0.0009218"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSEELSGGR"	"[K].lSEELSGGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"588.82446"	"1176.64165"	"1176.64218"	"-0.45"	"-0.00027"	"8/72"	"8"	"72"	"7313165.23907471"	"HCD"	"MS2"	"20.64113"	"396.6"	"100.000"	"46.5560"	"13934"	"13934"	"13923"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"561.3"	""	"484.4"	""	"541.6"	""	"653.3"	""	"744.6"	"781.8"	""	"791"	"33"	"35.000"	"28.000"	"0.0194154065018354"	"26"	"0"	"0.002795"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSEELSGGR"	"[K].lSEELSGGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"588.82483"	"1176.64238"	"1176.64218"	"0.17"	"0.00010"	"8/72"	"8"	"72"	"8657856.86560059"	"HCD"	"MS2"	"9.351015"	"427.8"	"100.000"	"46.7031"	"13983"	"13983"	"13974"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"625.5"	""	"546.4"	""	"567.8"	""	"684.5"	""	"813.7"	"820.4"	""	"804"	"38"	"36.000"	"29.000"	"0.0060565604060707"	"27"	"0"	"0.002002"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSEELSGGR"	"[K].lSEELSGGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"588.82507"	"1176.64287"	"1176.64218"	"0.58"	"0.00034"	"8/72"	"8"	"72"	"7106453.78564453"	"HCD"	"MS2"	"30.95789"	"371.2"	"100.000"	"46.4306"	"13872"	"13872"	"13852"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"571.0"	""	"500.9"	""	"454.6"	""	"605.3"	""	"705.1"	"686.2"	""	"802"	"38"	"36.000"	"29.000"	"0.00611145154272713"	"27"	"0"	"0.002192"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSEELSGGR"	"[K].lSEELSGGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"588.82507"	"1176.64287"	"1176.64218"	"0.58"	"0.00034"	"8/72"	"8"	"72"	"8925006.16821289"	"HCD"	"MS2"	"27.17802"	"450.9"	"100.000"	"46.2740"	"13820"	"13820"	"13801"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"692.6"	""	"594.3"	""	"575.0"	""	"729.7"	""	"825.2"	"864.9"	""	"802"	"41"	"36.000"	"29.000"	"0.00332770157773283"	"27"	"0"	"0.001921"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEISGDLAR"	"[K].sEISGDLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.5800"	"0.0000"	"1"	"1"	"1"	"588.82532"	"1176.64336"	"1176.64218"	"1.00"	"0.00059"	"8/74"	"8"	"74"	"2393949.41229248"	"HCD"	"MS2"	"22.96956"	"137.4"	"100.000"	"40.4853"	"11459"	"11459"	"11442"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"184.2"	""	"176.5"	""	"175.3"	""	"243.9"	"3.5"	"258.0"	"260.9"	""	"794"	"50"	"35.000"	"28.000"	"0.000412848305834137"	""	"0"	"0.0005243"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVNGEK"	"[K].gDVNGEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P30710; P23764"	"Epididymal secretory glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx5 PE=2 SV=1; Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"588.83514"	"1176.66301"	"1176.66247"	"0.46"	"0.00027"	"6/62"	"6"	"62"	"3600256.86358643"	"HCD"	"MS2"	"54.05233"	"271.0"	"100.000"	"25.7161"	"5465"	"5465"	"5438"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"375.5"	""	"294.2"	""	"293.0"	""	"491.2"	""	"554.8"	"566.2"	""	"822"	"25"	"36.000"	"29.000"	"0.132996992998077"	"28"	"0.004282"	"0.04616"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVNGEK"	"[K].gDVNGEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P30710; P23764"	"Epididymal secretory glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx5 PE=2 SV=1; Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"588.83514"	"1176.66301"	"1176.66247"	"0.46"	"0.00027"	"6/62"	"6"	"62"	"3908304.96942139"	"HCD"	"MS2"	"50.53779"	"293.0"	"100.000"	"25.6332"	"5446"	"5446"	"5418"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"405.3"	""	"310.8"	""	"336.5"	""	"523.3"	""	"588.5"	"620.2"	""	"822"	"23"	"36.000"	"29.000"	"0.213718354575275"	"24"	"0.004817"	"0.05066"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGSGELK"	"[K].gAGSGELk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"588.85211"	"1176.69695"	"1176.69886"	"-1.62"	"-0.00096"	"6/60"	"6"	"60"	"4758739.16607666"	"HCD"	"MS2"	"6.751735"	"329.6"	"100.000"	"32.0469"	"8045"	"8045"	"8025"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"459.8"	"3.2"	"426.5"	""	"483.7"	""	"520.7"	""	"577.9"	"651.9"	""	"590"	"25"	"34.000"	"27.000"	"0.0848832532347022"	"22"	"0.001374"	"0.01745"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGSGELK"	"[K].gAGSGELk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"588.85211"	"1176.69695"	"1176.69886"	"-1.62"	"-0.00096"	"6/60"	"6"	"60"	"4807024.45770264"	"HCD"	"MS2"	"7.211253"	"349.2"	"100.000"	"32.0634"	"8044"	"8044"	"8022"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"484.5"	""	"449.6"	""	"478.5"	""	"539.1"	""	"666.0"	"699.0"	""	"590"	"25"	"34.000"	"27.000"	"0.0860640969130343"	"22"	"0.001311"	"0.01573"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGAEGTK"	"[K].vGGAEGTk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"O35964"	"Endophilin-A2 OS=Rattus norvegicus OX=10116 GN=Sh3gl1 PE=1 SV=1"	"O35179; O35964"	"Endophilin-A1 OS=Rattus norvegicus OX=10116 GN=Sh3gl2 PE=1 SV=2; Endophilin-A2 OS=Rattus norvegicus OX=10116 GN=Sh3gl1 PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"588.85272"	"1176.69817"	"1176.69886"	"-0.59"	"-0.00035"	"11/60"	"11"	"60"	"2619456.0402832"	"HCD"	"MS2"	"0"	"186.6"	"100.000"	"29.0207"	"6807"	"6807"	"6779"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"210.3"	""	"186.0"	""	"213.5"	""	"366.5"	""	"396.3"	"403.7"	""	"568"	"41"	"34.000"	"27.000"	"0.00243398748045425"	"24"	"0"	"0.002938"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGSGELK"	"[K].gAGSGELk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"588.85291"	"1176.69853"	"1176.69886"	"-0.28"	"-0.00016"	"7/60"	"7"	"60"	"9372924.44818115"	"HCD"	"MS2"	"4.535035"	"683.1"	"100.000"	"31.7301"	"7917"	"7917"	"7897"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1029.5"	""	"925.3"	""	"933.9"	""	"1051.5"	""	"1205.7"	"1326.8"	""	"568"	"37"	"34.000"	"27.000"	"0.00521576889510931"	""	"0.0003538"	"0.006597"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGSGELK"	"[K].gAGSGELk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"588.85297"	"1176.69866"	"1176.69886"	"-0.17"	"-0.00010"	"7/60"	"7"	"60"	"12104661.543457"	"HCD"	"MS2"	"5.614854"	"866.7"	"100.000"	"31.7674"	"7923"	"7923"	"7897"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1303.3"	""	"1184.4"	""	"1175.1"	""	"1323.5"	""	"1544.1"	"1690.1"	""	"568"	"36"	"34.000"	"27.000"	"0.00659657250165418"	""	"0.0003538"	"0.006619"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGAEGTK"	"[K].vGGAEGTk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"O35964"	"Endophilin-A2 OS=Rattus norvegicus OX=10116 GN=Sh3gl1 PE=1 SV=1"	"O35179; O35964"	"Endophilin-A1 OS=Rattus norvegicus OX=10116 GN=Sh3gl2 PE=1 SV=2; Endophilin-A2 OS=Rattus norvegicus OX=10116 GN=Sh3gl1 PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"588.85315"	"1176.69902"	"1176.69886"	"0.14"	"0.00008"	"7/60"	"7"	"60"	"2129969.0760498"	"HCD"	"MS2"	"0"	"165.2"	"100.000"	"28.9373"	"6786"	"6786"	"6758"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"182.1"	""	"179.9"	""	"192.4"	""	"321.3"	"0.6"	"347.3"	"345.7"	""	"598"	"32"	"34.000"	"27.000"	"0.0196187434624569"	"21"	"0.0002479"	"0.005154"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPENAAGR"	"[R].fSPENAAGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"589.31128"	"1177.61528"	"1177.61630"	"-0.87"	"-0.00051"	"8/76"	"8"	"76"	"9614323.71417236"	"HCD"	"MS2"	"3.40213"	"457.7"	"100.000"	"37.3057"	"10171"	"10171"	"10157"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"582.4"	""	"591.1"	""	"638.4"	""	"782.0"	""	"871.6"	"877.7"	""	"661"	"35"	"35.000"	"28.000"	"0.0102605694387642"	"25"	"0.001211"	"0.01522"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPENAAGR"	"[R].fSPENAAGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"589.31146"	"1177.61565"	"1177.61630"	"-0.56"	"-0.00033"	"7/76"	"7"	"76"	"7072169.06036377"	"HCD"	"MS2"	"14.71343"	"408.9"	"100.000"	"37.4212"	"10222"	"10222"	"10209"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"533.4"	""	"533.4"	""	"512.0"	""	"718.6"	""	"743.1"	"846.5"	""	"660"	"29"	"35.000"	"28.000"	"0.0423169092276487"	"23"	"0"	"0.001974"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPENAAGR"	"[R].fSPENAAGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"589.31171"	"1177.61614"	"1177.61630"	"-0.14"	"-0.00008"	"6/76"	"6"	"76"	"9006075.45080566"	"HCD"	"MS2"	"16.78757"	"477.0"	"100.000"	"37.5716"	"10277"	"10277"	"10266"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"643.4"	""	"633.6"	""	"599.4"	""	"842.6"	""	"837.3"	"974.8"	""	"658"	"30"	"35.000"	"28.000"	"0.0329"	"24"	"0.002973"	"0.02897"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPENAAGR"	"[R].fSPENAAGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"589.31183"	"1177.61638"	"1177.61630"	"0.07"	"0.00004"	"8/76"	"8"	"76"	"11160594.196106"	"HCD"	"MS2"	"4.960602"	"545.6"	"100.000"	"37.1347"	"10107"	"10107"	"10090"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"690.6"	""	"732.7"	""	"765.8"	""	"904.1"	"0.6"	"1005.7"	"1072.5"	""	"657"	"34"	"35.000"	"28.000"	"0.0122612676835894"	"26"	"0.001211"	"0.01477"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFTPAELR"	"[R].dFTPAELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"3"	"589.32336"	"1177.63945"	"1177.64145"	"-1.70"	"-0.00100"	"6/66"	"6"	"66"	"2014530.8369751"	"HCD"	"MS2"	"12.5422"	"97.2"	"100.000"	"61.6710"	"20046"	"20046"	"20017"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"117.3"	"2.7"	"128.2"	""	"130.1"	""	"174.1"	""	"191.7"	"178.7"	""	"705"	"20"	"35.000"	"28.000"	"0.322967722768005"	"18"	"0.004431"	"0.04631"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFTPAELR"	"[R].dFTPAELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"589.32367"	"1177.64006"	"1177.64145"	"-1.18"	"-0.00070"	"6/66"	"6"	"66"	"1066876.68121338"	"HCD"	"MS2"	"24.83369"	"49.1"	"100.000"	"62.1434"	"20250"	"20250"	"20232"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.1"	""	"62.6"	""	"68.4"	""	"81.2"	""	"93.1"	"107.4"	""	"688"	"21"	"35.000"	"28.000"	"0.262759509550725"	"19"	"0.003967"	"0.0413"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFTPAELR"	"[R].dFTPAELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"589.32373"	"1177.64018"	"1177.64145"	"-1.08"	"-0.00063"	"5/66"	"5"	"66"	"3821297.4597168"	"HCD"	"MS2"	"17.1731"	"168.3"	"100.000"	"61.5750"	"20022"	"20022"	"20001"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"201.3"	""	"236.0"	""	"229.1"	""	"323.5"	""	"307.9"	"297.9"	""	"688"	"43"	"35.000"	"28.000"	"0.00187740704215397"	"25"	"0"	"0.003531"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFTPAELR"	"[R].dFTPAELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"589.32385"	"1177.64043"	"1177.64145"	"-0.87"	"-0.00051"	"8/66"	"8"	"66"	"8826510.55181885"	"HCD"	"MS2"	"0"	"364.2"	"100.000"	"61.8570"	"20136"	"20136"	"20128"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"435.1"	""	"464.0"	""	"507.3"	""	"672.3"	""	"682.4"	"697.7"	""	"697"	"42"	"35.000"	"28.000"	"0.00217371590165623"	"25"	"0.0002479"	"0.005624"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFTPAELR"	"[R].dFTPAELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"589.32404"	"1177.64079"	"1177.64145"	"-0.56"	"-0.00033"	"5/66"	"5"	"66"	"9720672.27368164"	"HCD"	"MS2"	"0"	"389.9"	"100.000"	"61.9396"	"20155"	"20155"	"20147"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"481.4"	""	"516.9"	""	"541.6"	""	"673.6"	""	"743.2"	"744.3"	""	"688"	"43"	"35.000"	"28.000"	"0.00181785166610662"	"25"	"0.0002479"	"0.005398"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVNGEK"	"[K].gDVnGEk.[E]"	"N-Term(TMT6plex); N4(Deamidated); K7(TMT6plex)"	"1"	"2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P30710; P23764"	"Epididymal secretory glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx5 PE=2 SV=1; Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.3043"	"0.0000"	"1"	"1"	"1"	"589.32672"	"1177.64617"	"1177.64649"	"-0.27"	"-0.00016"	"5/62"	"5"	"62"	"2574748.83636475"	"HCD"	"MS2"	"50.11327"	"213.3"	"100.000"	"27.9598"	"6390"	"6390"	"6365"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"265.2"	""	"196.8"	""	"179.1"	""	"377.7"	""	"501.6"	"519.2"	""	"714"	"23"	"35.000"	"28.000"	"0.196186091967172"	""	"0.00557"	"0.06291"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVNGEK"	"[K].gDVnGEk.[E]"	"N-Term(TMT6plex); N4(Deamidated); K7(TMT6plex)"	"1"	"2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P30710; P23764"	"Epididymal secretory glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx5 PE=2 SV=1; Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"589.32709"	"1177.64690"	"1177.64649"	"0.35"	"0.00020"	"5/62"	"5"	"62"	"2110412.01147461"	"HCD"	"MS2"	"30.22548"	"181.1"	"100.000"	"28.0519"	"6413"	"6413"	"6390"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"222.8"	""	"155.5"	""	"162.3"	""	"327.3"	""	"435.4"	"423.7"	""	"739"	"21"	"35.000"	"28.000"	"0.264006392484902"	""	"0.006769"	"0.0769"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TILTTEDR"	"[K].tILTTEDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4C0"	"Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Rattus norvegicus OX=10116 GN=Fmo5 PE=1 SV=3"	"Q8K4C0"	"Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Rattus norvegicus OX=10116 GN=Fmo5 PE=1 SV=3"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"589.33386"	"1177.66045"	"1177.66258"	"-1.81"	"-0.00107"	"7/68"	"7"	"68"	"1897635.60174561"	"HCD"	"MS2"	"36.54251"	"125.3"	"100.000"	"41.8976"	"12042"	"12042"	"12015"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"163.6"	""	"136.5"	""	"174.1"	""	"222.5"	""	"244.9"	"248.2"	""	"737"	"46"	"35.000"	"28.000"	"0.000951562880248848"	"27"	"0"	"0.001985"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TILTTEDR"	"[K].tILTTEDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4C0"	"Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Rattus norvegicus OX=10116 GN=Fmo5 PE=1 SV=3"	"Q8K4C0"	"Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Rattus norvegicus OX=10116 GN=Fmo5 PE=1 SV=3"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"589.33478"	"1177.66228"	"1177.66258"	"-0.26"	"-0.00015"	"7/68"	"7"	"68"	"1985513.21990967"	"HCD"	"MS2"	"46.06433"	"131.4"	"100.000"	"42.0015"	"12074"	"12074"	"12049"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"183.9"	""	"154.9"	""	"183.9"	""	"225.8"	""	"253.1"	"245.2"	""	"692"	"39"	"35.000"	"28.000"	"0.00449858673999519"	"27"	"0"	"0.002303"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTDEK"	"[K].gIGTDEk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"589.34454"	"1177.68181"	"1177.68287"	"-0.90"	"-0.00053"	"10/52"	"10"	"52"	"9843002.89801025"	"HCD"	"MS2"	"1.904173"	"695.4"	"100.000"	"34.9686"	"9227"	"9227"	"9210"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1007.1"	""	"1007.4"	""	"953.9"	""	"1115.1"	""	"1281.2"	"1225.4"	""	"657"	"28"	"35.000"	"28.000"	"0.0467235006569847"	"23"	"0.006834"	"0.07953"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTDEK"	"[K].gIGTDEk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"589.34479"	"1177.68230"	"1177.68287"	"-0.49"	"-0.00029"	"6/52"	"6"	"52"	"18786537.5992432"	"HCD"	"MS2"	"0.2601821"	"709.2"	"52.653"	"35.2720"	"9351"	"9351"	"9334"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"933.6"	""	"910.4"	""	"1012.3"	""	"1043.2"	""	"1386.0"	"1447.9"	""	"657"	"27"	"35.000"	"28.000"	"0.0617355574319874"	"23"	"0.00736"	"0.08513"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTDEK"	"[K].gIGTDEk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"589.34509"	"1177.68291"	"1177.68287"	"0.03"	"0.00002"	"6/52"	"6"	"52"	"23395455.7105713"	"HCD"	"MS2"	"0"	"848.8"	"51.657"	"35.3540"	"9379"	"9379"	"9362"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1166.8"	""	"1093.8"	""	"1180.9"	""	"1278.5"	""	"1627.7"	"1709.0"	""	"663"	"27"	"35.000"	"28.000"	"0.063457583914449"	"23"	"0.007872"	"0.09621"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTDEK"	"[K].gIGTDEk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"589.34515"	"1177.68303"	"1177.68287"	"0.13"	"0.00008"	"10/52"	"10"	"52"	"8974851.61376953"	"HCD"	"MS2"	"9.471642"	"659.6"	"100.000"	"35.0644"	"9260"	"9260"	"9239"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"957.0"	""	"919.5"	""	"897.9"	""	"1052.8"	""	"1214.3"	"1220.5"	""	"663"	"28"	"35.000"	"28.000"	"0.047477028860918"	"23"	"0.005309"	"0.06027"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDGVQDPR"	"[R].yDGVQDPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"589.80347"	"1178.59966"	"1178.60032"	"-0.56"	"-0.00033"	"5/70"	"5"	"70"	"4987612.58874512"	"HCD"	"MS2"	"35.02911"	"262.9"	"100.000"	"34.1615"	"8893"	"8893"	"8873"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"340.7"	""	"293.1"	""	"316.1"	""	"473.6"	""	"556.8"	"519.0"	""	"553"	"36"	"34.000"	"27.000"	"0.00747644487676095"	""	"0.002871"	"0.02688"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDGVQDPR"	"[R].yDGVQDPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"589.80365"	"1178.60002"	"1178.60032"	"-0.25"	"-0.00015"	"5/70"	"5"	"70"	"4325365.00976563"	"HCD"	"MS2"	"30.88323"	"230.0"	"100.000"	"34.1500"	"8895"	"8895"	"8871"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"291.0"	""	"250.9"	""	"256.0"	""	"441.2"	""	"474.9"	"476.0"	""	"552"	"33"	"34.000"	"27.000"	"0.0129690773975039"	"26"	"0.002973"	"0.02919"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLMPDGTSR"	"[K].gLmPDGTSR.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"589.80505"	"1178.60283"	"1178.60369"	"-0.73"	"-0.00043"	"7/70"	"7"	"70"	"1749256.90789795"	"HCD"	"MS2"	"100"	"84.2"	"100.000"	"27.1869"	"6061"	"6061"	"6033"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.6"	""	"100.1"	""	"100.5"	""	"205.5"	""	"143.5"	"149.9"	""	"560"	"13"	"34.000"	"27.000"	"1.34325365618273"	"22"	"0.008668"	"0.1114"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLMPDGTSR"	"[K].gLmPDGTSR.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"589.80554"	"1178.60381"	"1178.60369"	"0.10"	"0.00006"	"6/70"	"6"	"70"	"1750406.1942749"	"HCD"	"MS2"	"0"	"90.5"	"100.000"	"27.0923"	"6038"	"6038"	"6015"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"125.8"	""	"102.2"	""	"109.5"	""	"207.3"	"1.0"	"146.6"	"164.7"	""	"552"	"29"	"34.000"	"27.000"	"0.034746341365519"	"21"	"0.005067"	"0.05735"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNTVNTMR"	"[K].nNTVNTMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"589.81049"	"1178.61370"	"1178.61492"	"-1.04"	"-0.00061"	"6/76"	"6"	"76"	"5358561.02142334"	"HCD"	"MS2"	"0"	"265.8"	"100.000"	"23.1354"	"4444"	"4444"	"4421"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"489.8"	""	"382.4"	""	"388.3"	""	"293.3"	""	"453.8"	"508.7"	""	"599"	"40"	"34.000"	"27.000"	"0.00303666460028136"	""	"0.0004639"	"0.00763"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQSTAMNR"	"[R].aAQSTAMNR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"589.81061"	"1178.61394"	"1178.61492"	"-0.83"	"-0.00049"	"8/78"	"8"	"78"	"1633847.96697998"	"HCD"	"MS2"	"0"	"100.7"	"100.000"	"21.3371"	"3713"	"3713"	"3688"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"157.6"	""	"123.5"	""	"123.5"	""	"139.1"	""	"227.3"	"187.0"	""	"600"	"52"	"34.000"	"27.000"	"0.000205646467935798"	"20"	"0"	"0.0002818"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNTVNTMR"	"[K].nNTVNTMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"589.81085"	"1178.61443"	"1178.61492"	"-0.42"	"-0.00025"	"6/76"	"6"	"76"	"4939853.58935547"	"HCD"	"MS2"	"0"	"246.8"	"100.000"	"23.1677"	"4440"	"4440"	"4415"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"457.1"	""	"351.6"	""	"363.6"	""	"264.1"	""	"428.3"	"471.8"	""	"598"	"40"	"34.000"	"27.000"	"0.00299689266185292"	""	"0.0001301"	"0.004488"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQSTAMNR"	"[R].aAQSTAMNR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"589.81110"	"1178.61492"	"1178.61492"	"-0.01"	"0.00000"	"8/78"	"8"	"78"	"1392945.83770752"	"HCD"	"MS2"	"0"	"94.7"	"100.000"	"21.4154"	"3727"	"3727"	"3703"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"143.1"	""	"103.3"	""	"128.1"	""	"142.4"	""	"199.9"	"188.9"	""	"594"	"39"	"34.000"	"27.000"	"0.00397883976165503"	"19"	"0"	"0.0005892"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEFAQDAR"	"[K].lEFAQDAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZBP4"	"[F-actin]-monooxygenase MICAL1 OS=Rattus norvegicus OX=10116 GN=Mical1 PE=1 SV=1"	"D3ZBP4"	"[F-actin]-monooxygenase MICAL1 OS=Rattus norvegicus OX=10116 GN=Mical1 PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"589.82141"	"1178.63555"	"1178.63670"	"-0.98"	"-0.00058"	"6/70"	"6"	"70"	"753286.120727539"	"HCD"	"MS2"	"19.72008"	"53.0"	"100.000"	"55.2416"	"17473"	"17473"	"17447"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"83.4"	""	"67.6"	""	"73.3"	""	"78.5"	""	"103.0"	"99.6"	""	"689"	"28"	"35.000"	"28.000"	"0.0565183176867241"	"19"	"0.007686"	"0.09447"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAFEEGGR"	"[R].iAAFEEGGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"589.82159"	"1178.63591"	"1178.63670"	"-0.67"	"-0.00040"	"7/66"	"7"	"66"	"936155.992004395"	"HCD"	"MS2"	"29.43865"	"68.2"	"100.000"	"56.6742"	"18043"	"18043"	"18020"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"96.9"	""	"78.2"	""	"93.9"	""	"104.3"	""	"134.4"	"139.8"	""	"692"	"29"	"35.000"	"28.000"	"0.0421770401228004"	"20"	"0"	"0.001627"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEFAQDAR"	"[K].lEFAQDAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZBP4"	"[F-actin]-monooxygenase MICAL1 OS=Rattus norvegicus OX=10116 GN=Mical1 PE=1 SV=1"	"D3ZBP4"	"[F-actin]-monooxygenase MICAL1 OS=Rattus norvegicus OX=10116 GN=Mical1 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"3"	"589.82159"	"1178.63591"	"1178.63670"	"-0.67"	"-0.00040"	"6/70"	"6"	"70"	"946526.81060791"	"HCD"	"MS2"	"19.48358"	"64.9"	"100.000"	"55.3565"	"17506"	"17506"	"17479"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"101.7"	""	"68.6"	""	"97.7"	""	"111.9"	""	"122.9"	"115.9"	""	"692"	"30"	"35.000"	"28.000"	"0.032664506319493"	"24"	"0.005119"	"0.05807"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAFEEGGR"	"[R].iAAFEEGGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"589.82166"	"1178.63603"	"1178.63670"	"-0.57"	"-0.00033"	"8/66"	"8"	"66"	"1029510.80993652"	"HCD"	"MS2"	"6.551173"	"57.0"	"100.000"	"56.3402"	"17907"	"17907"	"17883"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"98.6"	""	"74.6"	""	"80.0"	""	"80.4"	"0.1"	"99.2"	"107.0"	""	"688"	"43"	"35.000"	"28.000"	"0.00170827758578916"	"23"	"0"	"0.002002"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAFEEGGR"	"[R].iAAFEEGGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"589.82184"	"1178.63640"	"1178.63670"	"-0.26"	"-0.00015"	"7/66"	"7"	"66"	"1195365.51702881"	"HCD"	"MS2"	"13.91739"	"72.9"	"100.000"	"56.4420"	"17962"	"17962"	"17942"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.8"	""	"87.0"	""	"103.1"	""	"104.8"	""	"148.7"	"149.9"	""	"687"	"37"	"35.000"	"28.000"	"0.00758449625791992"	"23"	"0"	"0.001431"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDENAVVR"	"[R].fDENAVVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"589.82184"	"1178.63640"	"1178.63670"	"-0.26"	"-0.00015"	"7/66"	"7"	"66"	"9023727.08135986"	"HCD"	"MS2"	"2.530344"	"362.6"	"100.000"	"51.8348"	"16086"	"16086"	"16069"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"898.2"	""	"177.0"	""	"483.9"	""	"671.3"	"0.3"	"715.3"	"480.6"	""	"687"	"38"	"35.000"	"28.000"	"0.00509244962247635"	"25"	"0.0003538"	"0.006655"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDENAVVR"	"[R].fDENAVVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"589.82196"	"1178.63664"	"1178.63670"	"-0.05"	"-0.00003"	"7/66"	"7"	"66"	"7157211.4934082"	"HCD"	"MS2"	"3.593742"	"300.3"	"100.000"	"51.8449"	"16078"	"16078"	"16059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"748.3"	""	"131.1"	""	"414.4"	""	"554.8"	""	"604.1"	"387.3"	""	"690"	"40"	"35.000"	"28.000"	"0.00331756236042364"	"25"	"0"	"0.003541"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDENAVVR"	"[R].fDENAVVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"589.82196"	"1178.63664"	"1178.63670"	"-0.05"	"-0.00003"	"7/66"	"7"	"66"	"7378827.5980835"	"HCD"	"MS2"	"3.175275"	"309.8"	"100.000"	"51.5315"	"15961"	"15961"	"15941"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"801.6"	""	"142.7"	""	"416.2"	""	"569.6"	""	"622.0"	"388.3"	""	"690"	"39"	"35.000"	"28.000"	"0.00433330337474732"	"24"	"0"	"0.003549"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAFEEGGR"	"[R].iAAFEEGGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"589.82202"	"1178.63677"	"1178.63670"	"0.05"	"0.00003"	"7/66"	"7"	"66"	"735725.513977051"	"HCD"	"MS2"	"14.95689"	"43.7"	"100.000"	"56.1192"	"17831"	"17831"	"17805"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.7"	""	"59.1"	""	"58.8"	""	"68.5"	""	"79.9"	"80.8"	""	"690"	"44"	"35.000"	"28.000"	"0.00129068152953858"	"24"	"0"	"0.0005763"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDENAVVR"	"[R].fDENAVVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"589.82214"	"1178.63701"	"1178.63670"	"0.26"	"0.00015"	"7/66"	"7"	"66"	"9587917.21728516"	"HCD"	"MS2"	"0"	"373.7"	"91.411"	"52.1299"	"16194"	"16194"	"16179"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"918.3"	""	"171.5"	""	"508.5"	""	"683.8"	"0.9"	"765.1"	"484.8"	""	"680"	"38"	"35.000"	"28.000"	"0.0051342725241581"	"25"	"0.0001301"	"0.00424"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEIAFEDR"	"[K].aEIAFEDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"590.31317"	"1179.61907"	"1179.62072"	"-1.40"	"-0.00083"	"6/66"	"6"	"66"	"1444357.19049072"	"HCD"	"MS2"	"29.23228"	"93.5"	"100.000"	"53.8234"	"16886"	"16886"	"16864"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"135.0"	""	"133.0"	""	"126.6"	""	"125.4"	""	"170.3"	"198.2"	""	"652"	"35"	"35.000"	"28.000"	"0.0106713066530501"	"18"	"0.0001301"	"0.004282"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEIAFEDR"	"[K].aEIAFEDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"590.31372"	"1179.62016"	"1179.62072"	"-0.47"	"-0.00028"	"6/66"	"6"	"66"	"1479526.98937988"	"HCD"	"MS2"	"18.40352"	"90.0"	"100.000"	"53.5167"	"16772"	"16772"	"16748"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"121.5"	""	"108.1"	""	"117.8"	""	"123.5"	"0.4"	"181.9"	"200.8"	""	"675"	"39"	"35.000"	"28.000"	"0.00434784223696432"	"26"	"0"	"0.003039"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDDVFGR"	"[K].eLDDVFGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"A2RRT9"	"Cytochrome P450 4V2 OS=Rattus norvegicus OX=10116 GN=Cyp4v2 PE=2 SV=1"	"A2RRT9"	"Cytochrome P450 4V2 OS=Rattus norvegicus OX=10116 GN=Cyp4v2 PE=2 SV=1"	"0"	"2"	"2"	"0.3043"	"0.0000"	"1"	"1"	"1"	"590.31378"	"1179.62029"	"1179.62072"	"-0.37"	"-0.00022"	"7/62"	"7"	"62"	"781973.30291748"	"HCD"	"MS2"	"10.28352"	"39.5"	"100.000"	"75.6934"	"25739"	"25739"	"25717"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.5"	""	"39.4"	""	"44.3"	""	"70.6"	""	"88.4"	"87.6"	""	"675"	"23"	"35.000"	"28.000"	"0.173489732409069"	""	"0.0003538"	"0.006508"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDDVFGR"	"[K].eLDDVFGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"A2RRT9"	"Cytochrome P450 4V2 OS=Rattus norvegicus OX=10116 GN=Cyp4v2 PE=2 SV=1"	"A2RRT9"	"Cytochrome P450 4V2 OS=Rattus norvegicus OX=10116 GN=Cyp4v2 PE=2 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"590.31390"	"1179.62053"	"1179.62072"	"-0.16"	"-0.00009"	"5/62"	"5"	"62"	"557983.326782227"	"HCD"	"MS2"	"39.14155"	"30.5"	"100.000"	"75.4641"	"25656"	"25656"	"25641"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.8"	""	"32.0"	""	"36.0"	""	"59.6"	""	"49.9"	"76.3"	""	"675"	"13"	"35.000"	"28.000"	"1.71899168981803"	"19"	"0.003111"	"0.03125"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSLEELR"	"[R].gFSLEELR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"590.33105"	"1179.65483"	"1179.65710"	"-1.93"	"-0.00114"	"7/62"	"7"	"62"	"894194.986999512"	"HCD"	"MS2"	"8.777122"	"46.4"	"100.000"	"81.9878"	"28284"	"28284"	"28270"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"72.5"	""	"65.5"	""	"63.4"	""	"84.5"	""	"75.0"	"80.6"	""	"660"	"30"	"35.000"	"28.000"	"0.0315147553387074"	"25"	"0.0001301"	"0.00477"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFDEAIR"	"[K].tVFDEAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"590.33118"	"1179.65508"	"1179.65710"	"-1.72"	"-0.00101"	"6/64"	"6"	"64"	"313979.435852051"	"HCD"	"MS2"	"48.9277"	"22.6"	"100.000"	"68.1405"	"22670"	"22670"	"22647"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.1"	""	"24.5"	""	"35.1"	""	"33.8"	"0.7"	"43.1"	"42.7"	""	"654"	"17"	"35.000"	"28.000"	"0.625961687481895"	"21"	"0.005617"	"0.06454"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFDEAIR"	"[K].tVFDEAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"590.33124"	"1179.65520"	"1179.65710"	"-1.61"	"-0.00095"	"6/64"	"6"	"64"	"349580.796813965"	"HCD"	"MS2"	"33.05395"	"23.4"	"100.000"	"68.1759"	"22699"	"22699"	"22671"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.6"	""	"34.6"	""	"38.9"	""	"33.4"	""	"36.7"	"44.7"	""	"654"	"10"	"35.000"	"28.000"	"3.15898637429669"	"18"	"0.008478"	"0.1036"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGEYLER"	"[K].aLGEYLER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"590.33148"	"1179.65569"	"1179.65710"	"-1.20"	"-0.00071"	"7/62"	"7"	"62"	"999709.735900879"	"HCD"	"MS2"	"1.840327"	"55.6"	"100.000"	"64.9917"	"21387"	"21387"	"21367"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"71.2"	""	"70.0"	""	"87.3"	""	"82.7"	"1.3"	"103.6"	"110.7"	""	"635"	"44"	"35.000"	"28.000"	"0.00123806580769802"	"22"	"0.0003538"	"0.007261"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGEYLER"	"[K].aLGEYLER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.3421"	"0.0000"	"1"	"1"	"1"	"590.33154"	"1179.65581"	"1179.65710"	"-1.10"	"-0.00065"	"7/62"	"7"	"62"	"7766816.28521729"	"HCD"	"MS2"	"0.4175071"	"327.6"	"100.000"	"64.6006"	"21248"	"21248"	"21231"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"439.8"	""	"413.8"	""	"429.5"	""	"567.3"	""	"607.6"	"650.6"	""	"635"	"38"	"35.000"	"28.000"	"0.0055429853355226"	"23"	"0.0006732"	"0.008784"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFDEAIR"	"[K].tVFDEAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"590.33167"	"1179.65605"	"1179.65710"	"-0.89"	"-0.00053"	"6/64"	"6"	"64"	"486700.283996582"	"HCD"	"MS2"	"11.40208"	"31.6"	"100.000"	"67.6539"	"22472"	"22472"	"22446"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.6"	""	"40.4"	""	"48.3"	""	"54.8"	"0.1"	"55.5"	"61.9"	""	"649"	"24"	"35.000"	"28.000"	"0.117818828772898"	"23"	"0.001374"	"0.01594"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGEYLER"	"[K].aLGEYLER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"590.33167"	"1179.65605"	"1179.65710"	"-0.89"	"-0.00053"	"7/62"	"7"	"62"	"1385728.57623291"	"HCD"	"MS2"	"1.619314"	"72.0"	"100.000"	"64.8829"	"21359"	"21359"	"21342"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"82.2"	""	"89.7"	""	"99.0"	""	"116.3"	""	"144.7"	"153.1"	""	"649"	"48"	"35.000"	"28.000"	"0.000543518963270579"	"27"	"0"	"0.002686"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELGEYIR"	"[R].aELGEYIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"590.33167"	"1179.65605"	"1179.65710"	"-0.89"	"-0.00053"	"7/62"	"7"	"62"	"5113385.94256592"	"HCD"	"MS2"	"14.20566"	"230.8"	"100.000"	"64.3074"	"21128"	"21128"	"21110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"300.2"	""	"295.5"	""	"310.4"	""	"403.1"	""	"429.6"	"451.6"	""	"649"	"40"	"35.000"	"28.000"	"0.00352545114863738"	"27"	"0"	"0.003476"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSLEELR"	"[R].gFSLEELR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"590.33173"	"1179.65618"	"1179.65710"	"-0.79"	"-0.00046"	"11/62"	"11"	"62"	"385717.825500488"	"HCD"	"MS2"	"17.81831"	"19.5"	"100.000"	"82.2664"	"28392"	"28392"	"28376"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.4"	""	"22.0"	""	"24.9"	""	"38.5"	""	"32.8"	"37.0"	""	"649"	"13"	"35.000"	"28.000"	"1.4528296720523"	"16"	"0.003449"	"0.03568"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFDEAIR"	"[K].tVFDEAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"590.33173"	"1179.65618"	"1179.65710"	"-0.79"	"-0.00046"	"6/64"	"6"	"64"	"534304.49786377"	"HCD"	"MS2"	"5.187831"	"34.1"	"100.000"	"67.5186"	"22432"	"22432"	"22408"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.2"	""	"45.2"	""	"41.1"	""	"61.1"	""	"63.3"	"62.6"	""	"649"	"24"	"35.000"	"28.000"	"0.116470167792304"	"26"	"0.005119"	"0.05783"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIYPTDSR"	"[K].vIYPTDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F795"	"Choline transporter-like protein 2 OS=Rattus norvegicus OX=10116 GN=Slc44a2 PE=2 SV=1"	"B4F795"	"Choline transporter-like protein 2 OS=Rattus norvegicus OX=10116 GN=Slc44a2 PE=2 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"590.33179"	"1179.65630"	"1179.65710"	"-0.68"	"-0.00040"	"7/60"	"7"	"60"	"2375311.19769287"	"HCD"	"MS2"	"7.136674"	"109.3"	"100.000"	"45.4499"	"13484"	"13484"	"13461"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.0"	""	"116.5"	""	"116.4"	""	"193.0"	"3.8"	"241.6"	"255.7"	""	"649"	"27"	"35.000"	"28.000"	"0.0718149233267029"	"17"	"0.0006732"	"0.008614"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFDEAIR"	"[K].tVFDEAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"590.33179"	"1179.65630"	"1179.65710"	"-0.68"	"-0.00040"	"6/64"	"6"	"64"	"11030136.6635742"	"HCD"	"MS2"	"0.4505625"	"299.5"	"63.056"	"67.0125"	"22211"	"22211"	"22195"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"413.6"	""	"408.3"	""	"419.0"	""	"470.0"	""	"566.8"	"560.9"	""	"649"	"39"	"35.000"	"28.000"	"0.00446904472656086"	""	"0.0001301"	"0.004209"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELGEYIR"	"[R].aELGEYIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"590.33185"	"1179.65642"	"1179.65710"	"-0.58"	"-0.00034"	"7/62"	"7"	"62"	"4729912.36566162"	"HCD"	"MS2"	"15.1381"	"210.2"	"100.000"	"64.3851"	"21146"	"21146"	"21131"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"284.0"	""	"262.8"	""	"296.8"	""	"347.7"	""	"397.7"	"407.1"	""	"645"	"36"	"35.000"	"28.000"	"0.0086801997426643"	"25"	"0.0002479"	"0.005164"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSLEELR"	"[R].gFSLEELR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"590.33209"	"1179.65691"	"1179.65710"	"-0.17"	"-0.00010"	"5/62"	"5"	"62"	"511551.902526855"	"HCD"	"MS2"	"12.77215"	"25.0"	"100.000"	"82.2721"	"28397"	"28397"	"28385"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.7"	""	"35.6"	""	"43.2"	""	"39.2"	""	"43.9"	"40.8"	""	"645"	"34"	"35.000"	"28.000"	"0.0143724140108195"	"20"	"0.000936"	"0.01196"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGEYLER"	"[K].aLGEYLER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.3421"	"0.0000"	"1"	"1"	"1"	"590.33209"	"1179.65691"	"1179.65710"	"-0.17"	"-0.00010"	"7/62"	"7"	"62"	"7243458.34796143"	"HCD"	"MS2"	"0.4997427"	"336.7"	"100.000"	"64.6942"	"21272"	"21272"	"21255"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"441.2"	""	"434.1"	""	"463.6"	""	"543.7"	""	"649.0"	"665.0"	""	"645"	"38"	"35.000"	"28.000"	"0.00570860139057368"	"22"	"0.0002479"	"0.005258"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFDEAIR"	"[K].tVFDEAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.6757"	"0.0000"	"1"	"1"	"1"	"590.33209"	"1179.65691"	"1179.65710"	"-0.17"	"-0.00010"	"6/64"	"6"	"64"	"14689542.4116211"	"HCD"	"MS2"	"0.4185017"	"429.3"	"69.700"	"66.8822"	"22173"	"22173"	"22156"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"636.2"	""	"584.8"	""	"592.2"	""	"673.2"	""	"775.4"	"809.6"	""	"645"	"37"	"35.000"	"28.000"	"0.00636106332397041"	"27"	"0.0003538"	"0.006314"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFDEAIR"	"[K].tVFDEAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"590.33215"	"1179.65703"	"1179.65710"	"-0.06"	"-0.00004"	"11/64"	"11"	"64"	"42891429.4458008"	"HCD"	"MS2"	"0.4196776"	"562.4"	"32.673"	"66.5711"	"22046"	"22046"	"22029"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"821.8"	""	"815.3"	""	"772.6"	""	"870.5"	""	"1001.5"	"1046.8"	""	"651"	"43"	"35.000"	"28.000"	"0.00181782048386838"	""	"0.0004639"	"0.00767"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFDEAIR"	"[K].tVFDEAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"590.33228"	"1179.65727"	"1179.65710"	"0.14"	"0.00009"	"6/64"	"6"	"64"	"2370793.65216064"	"HCD"	"MS2"	"12.63245"	"119.9"	"100.000"	"66.4065"	"21963"	"21963"	"21941"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"176.2"	""	"164.3"	""	"153.0"	""	"217.0"	"2.0"	"204.4"	"218.0"	""	"660"	"39"	"35.000"	"28.000"	"0.0044824343737376"	"27"	"0"	"0.003792"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFDEAIR"	"[K].tVFDEAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"590.33252"	"1179.65776"	"1179.65710"	"0.56"	"0.00033"	"11/64"	"11"	"64"	"49628271.1872559"	"HCD"	"MS2"	"0.2402573"	"441.6"	"20.143"	"66.7039"	"22085"	"22085"	"22068"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"630.5"	""	"609.5"	""	"627.6"	""	"701.8"	""	"792.9"	"821.9"	""	"657"	"42"	"35.000"	"28.000"	"0.00186009606449066"	""	"0.0006732"	"0.008661"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSLEELR"	"[R].gFSLEELR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"590.33258"	"1179.65788"	"1179.65710"	"0.66"	"0.00039"	"7/62"	"7"	"62"	"1008359.04901123"	"HCD"	"MS2"	"11.14896"	"51.6"	"100.000"	"81.9801"	"28278"	"28278"	"28258"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.6"	""	"65.5"	""	"75.7"	""	"91.1"	""	"90.7"	"81.8"	""	"656"	"33"	"35.000"	"28.000"	"0.0171345949991711"	"23"	"0.001374"	"0.01695"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFDEAIR"	"[K].tVFDEAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"590.33313"	"1179.65898"	"1179.65710"	"1.59"	"0.00094"	"6/64"	"6"	"64"	"1229023.89593506"	"HCD"	"MS2"	"21.6195"	"69.5"	"100.000"	"66.2896"	"21931"	"21931"	"21901"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"97.1"	""	"83.5"	""	"99.6"	""	"123.2"	"1.6"	"135.8"	"118.0"	""	"651"	"32"	"35.000"	"28.000"	"0.0197038454732399"	"24"	"0.0002479"	"0.005115"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AESEASK"	"[K].aESEASk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"590.33398"	"1179.66069"	"1179.66214"	"-1.23"	"-0.00072"	"4/56"	"4"	"56"	"569664.536437988"	"HCD"	"MS2"	"25.26455"	"56.1"	"100.000"	"23.3651"	"4538"	"4538"	"4513"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.3"	""	"61.2"	""	"88.3"	""	"88.5"	""	"97.6"	"109.4"	""	"627"	"19"	"34.000"	"27.000"	"0.359118307143175"	"24"	"0.009239"	"0.1207"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AESEASK"	"[K].aESEASk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"590.33447"	"1179.66167"	"1179.66214"	"-0.40"	"-0.00023"	"6/56"	"6"	"56"	"661443.625976563"	"HCD"	"MS2"	"29.66224"	"61.3"	"100.000"	"23.4110"	"4540"	"4540"	"4511"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.9"	""	"69.6"	""	"82.1"	""	"104.1"	"1.2"	"122.2"	"115.2"	""	"636"	"21"	"35.000"	"28.000"	"0.231967488260953"	"23"	"0.003111"	"0.03144"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADGTVK"	"[K].mADGTVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"590.34351"	"1179.67974"	"1179.68077"	"-0.87"	"-0.00052"	"10/52"	"10"	"52"	"1951654.76928711"	"HCD"	"MS2"	"28.54945"	"158.3"	"100.000"	"39.0625"	"10879"	"10879"	"10853"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"206.3"	""	"217.9"	""	"228.7"	""	"213.6"	"1.3"	"318.5"	"315.2"	""	"545"	"14"	"34.000"	"27.000"	"0.969095343100484"	"20"	"0.006769"	"0.07847"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADGTVK"	"[K].mADGTVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"590.34375"	"1179.68022"	"1179.68077"	"-0.46"	"-0.00027"	"5/52"	"5"	"52"	"5724961.1651001"	"HCD"	"MS2"	"29.89848"	"416.0"	"100.000"	"38.5465"	"10677"	"10677"	"10657"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"669.2"	""	"641.2"	""	"587.9"	""	"492.8"	""	"742.9"	"814.5"	""	"545"	"30"	"34.000"	"27.000"	"0.026385571583119"	"23"	"0.003653"	"0.03776"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADGTVK"	"[K].mADGTVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"590.34381"	"1179.68035"	"1179.68077"	"-0.36"	"-0.00021"	"8/52"	"8"	"52"	"2208061.3270874"	"HCD"	"MS2"	"26.27491"	"182.6"	"100.000"	"38.8524"	"10802"	"10802"	"10780"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"239.9"	""	"247.5"	""	"270.4"	""	"242.5"	""	"351.5"	"381.0"	""	"545"	"15"	"34.000"	"27.000"	"0.787710267944592"	"19"	"0.007808"	"0.09567"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADGTVK"	"[K].mADGTVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"590.34406"	"1179.68083"	"1179.68077"	"0.06"	"0.00003"	"10/52"	"10"	"52"	"4999367.29406738"	"HCD"	"MS2"	"25.32121"	"363.8"	"100.000"	"38.7406"	"10747"	"10747"	"10725"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"618.2"	""	"551.2"	""	"540.7"	""	"417.1"	""	"605.6"	"714.9"	""	"465"	"26"	"33.000"	"26.000"	"0.063448733450287"	"20"	"0.004069"	"0.04475"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADHGEPIGR"	"[R].aDHGEPIGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"590.81665"	"1180.62602"	"1180.62720"	"-1.00"	"-0.00059"	"9/70"	"9"	"70"	"1452134.63397217"	"HCD"	"MS2"	"0"	"75.2"	"100.000"	"20.9154"	"3541"	"3541"	"3520"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"115.2"	""	"91.3"	""	"99.3"	""	"153.1"	""	"136.4"	"120.8"	""	"629"	"28"	"34.000"	"27.000"	"0.0490479262139077"	"19"	"0.0008629"	"0.01064"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADHGEPIGR"	"[R].aDHGEPIGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"590.81714"	"1180.62700"	"1180.62720"	"-0.17"	"-0.00010"	"8/70"	"8"	"70"	"1422084.07824707"	"HCD"	"MS2"	"0"	"70.7"	"100.000"	"20.9755"	"3548"	"3548"	"3529"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"109.5"	""	"77.3"	""	"105.1"	""	"118.8"	""	"136.2"	"127.2"	""	"610"	"45"	"34.000"	"27.000"	"0.00100762710016228"	"19"	"0"	"0.0007525"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAAVSFAK"	"[M].tDAAVSFAk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"590.82275"	"1180.63823"	"1180.64112"	"-2.45"	"-0.00144"	"5/74"	"5"	"74"	"367942.840087891"	"HCD"	"MS2"	"22.43754"	"21.4"	"100.000"	"77.6052"	"26525"	"26525"	"26499"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.4"	""	"28.2"	""	"31.5"	""	"27.4"	""	"40.7"	"42.5"	""	"674"	"25"	"35.000"	"28.000"	"0.114717559929237"	"24"	"0.005119"	"0.05796"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAAVSFAK"	"[M].tDAAVSFAk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"590.82367"	"1180.64006"	"1180.64112"	"-0.90"	"-0.00053"	"5/74"	"5"	"74"	"4563621.89642334"	"HCD"	"MS2"	"14.62621"	"147.8"	"100.000"	"76.6413"	"26133"	"26133"	"26119"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"172.9"	""	"234.0"	""	"227.0"	""	"235.6"	""	"263.8"	"269.4"	""	"688"	"41"	"35.000"	"28.000"	"0.00274510172420184"	"24"	"0"	"0.001393"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAAVSFAK"	"[M].tDAAVSFAk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"590.82373"	"1180.64018"	"1180.64112"	"-0.79"	"-0.00047"	"6/74"	"6"	"74"	"10974928.0923462"	"HCD"	"MS2"	"2.199052"	"262.9"	"73.535"	"76.9387"	"26254"	"26254"	"26237"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"286.0"	""	"376.8"	""	"400.7"	""	"429.2"	""	"482.2"	"522.3"	""	"688"	"53"	"35.000"	"28.000"	"0.000180949939638403"	"25"	"0"	"0.001131"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAAVSFAK"	"[M].tDAAVSFAk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"590.82379"	"1180.64031"	"1180.64112"	"-0.69"	"-0.00041"	"5/74"	"5"	"74"	"958846.079345703"	"HCD"	"MS2"	"19.10177"	"42.0"	"100.000"	"77.2568"	"26383"	"26383"	"26364"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.3"	""	"59.2"	""	"66.0"	""	"71.0"	""	"79.4"	"74.5"	""	"688"	"44"	"35.000"	"28.000"	"0.00137898150863792"	"26"	"0.0004639"	"0.00755"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAAVSFAK"	"[M].tDAAVSFAk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"590.82397"	"1180.64067"	"1180.64112"	"-0.38"	"-0.00022"	"6/74"	"6"	"74"	"11422375.975769"	"HCD"	"MS2"	"1.898084"	"301.7"	"84.301"	"77.0256"	"26280"	"26280"	"26263"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"326.1"	""	"452.0"	""	"467.4"	""	"481.1"	""	"569.5"	"570.6"	""	"685"	"57"	"35.000"	"28.000"	"6.30464410503117E-05"	"26"	"0"	"0.001014"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAAVSFAK"	"[M].tDAAVSFAk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"590.82410"	"1180.64092"	"1180.64112"	"-0.17"	"-0.00010"	"6/74"	"6"	"74"	"3592753.02142334"	"HCD"	"MS2"	"16.07226"	"119.4"	"100.000"	"76.7253"	"26158"	"26158"	"26148"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"149.5"	""	"176.8"	""	"179.0"	""	"196.1"	""	"215.1"	"214.7"	""	"685"	"53"	"35.000"	"28.000"	"0.000176872606475684"	"24"	"0"	"0.0008268"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAAVSFAK"	"[M].tDAAVSFAk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"590.82422"	"1180.64116"	"1180.64112"	"0.03"	"0.00002"	"5/74"	"5"	"74"	"1198490.69024658"	"HCD"	"MS2"	"9.475446"	"48.8"	"100.000"	"77.3298"	"26402"	"26402"	"26384"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.5"	""	"69.3"	""	"66.2"	""	"79.7"	"0.1"	"88.8"	"101.3"	""	"685"	"40"	"35.000"	"28.000"	"0.0034328954404168"	"25"	"0.001886"	"0.02149"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTQSDK"	"[R].sGTQSDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"590.83234"	"1180.65740"	"1180.65739"	"0.01"	"0.00000"	"8/64"	"8"	"64"	"2165375.9765625"	"HCD"	"MS2"	"0"	"148.7"	"100.000"	"20.5305"	"3386"	"3386"	"3366"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"192.5"	""	"143.0"	""	"169.4"	""	"272.8"	""	"318.9"	"316.4"	""	"677"	"15"	"35.000"	"28.000"	"1.04847643278481"	"19"	"0.007627"	"0.09289"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTQSDK"	"[R].sGTQSDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"590.83270"	"1180.65813"	"1180.65739"	"0.63"	"0.00037"	"6/64"	"6"	"64"	"1983075.71136475"	"HCD"	"MS2"	"0"	"139.9"	"100.000"	"20.5937"	"3398"	"3398"	"3378"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"178.8"	""	"143.7"	""	"176.9"	""	"256.1"	""	"282.4"	"294.0"	""	"677"	"18"	"35.000"	"28.000"	"0.563065182150303"	"17"	"0.007147"	"0.08245"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGVLLEHR"	"[K].qGVLLEHR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"3"	"3"	"0.7714"	"0.0000"	"1"	"1"	"1"	"394.23773"	"1180.69864"	"1180.69997"	"-1.13"	"-0.00044"	"5/70"	"5"	"70"	"3302555.48022461"	"HCD"	"MS2"	"52.91279"	"98.7"	"100.000"	"31.2081"	"7704"	"7704"	"7683"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"104.6"	""	"123.4"	""	"137.1"	""	"164.9"	"5.1"	"193.3"	"208.3"	""	"357"	"35"	"32.000"	"25.000"	"0.00613250937001276"	"23"	"0.001374"	"0.01663"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGVLLEHR"	"[K].qGVLLEHR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"394.23807"	"1180.69965"	"1180.69997"	"-0.27"	"-0.00011"	"9/70"	"9"	"70"	"2797992.46435547"	"HCD"	"MS2"	"61.48343"	"88.6"	"100.000"	"31.2061"	"7694"	"7694"	"7663"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.1"	""	"104.0"	""	"115.6"	""	"146.5"	"4.4"	"183.0"	"183.6"	""	"353"	"31"	"32.000"	"25.000"	"0.0135439302872361"	"23"	"0.001211"	"0.01494"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELDTVCR"	"[R].aELDTVcR.[H]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P29826"	"Rano class II histocompatibility antigen, B-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Bb PE=2 SV=1"	"P29826"	"Rano class II histocompatibility antigen, B-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Bb PE=2 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"591.29572"	"1181.58415"	"1181.58560"	"-1.22"	"-0.00072"	"6/62"	"6"	"62"	"748686.463806152"	"HCD"	"MS2"	"38.90708"	"44.4"	"100.000"	"68.4503"	"22811"	"22811"	"22783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.0"	""	"66.1"	""	"73.0"	""	"61.4"	""	"77.4"	"73.2"	""	"446"	"29"	"33.000"	"26.000"	"0.0298060800189857"	"19"	"0"	"0.003283"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELDTVCR"	"[R].aELDTVcR.[H]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P29826"	"Rano class II histocompatibility antigen, B-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Bb PE=2 SV=1"	"P29826"	"Rano class II histocompatibility antigen, B-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Bb PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"591.29596"	"1181.58464"	"1181.58560"	"-0.81"	"-0.00048"	"7/62"	"7"	"62"	"707011.217346191"	"HCD"	"MS2"	"35.64837"	"41.3"	"100.000"	"68.6062"	"22860"	"22860"	"22837"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.1"	""	"62.1"	""	"65.2"	""	"66.0"	""	"66.9"	"65.8"	""	"454"	"16"	"33.000"	"26.000"	"0.514074257823625"	"17"	"0.0003538"	"0.007257"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELDTVCR"	"[R].aELDTVcR.[H]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P29826"	"Rano class II histocompatibility antigen, B-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Bb PE=2 SV=1"	"P29826"	"Rano class II histocompatibility antigen, B-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Bb PE=2 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"591.29596"	"1181.58464"	"1181.58560"	"-0.81"	"-0.00048"	"5/62"	"5"	"62"	"756996.031188965"	"HCD"	"MS2"	"31.01954"	"42.6"	"100.000"	"68.7431"	"22930"	"22930"	"22911"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.9"	""	"51.9"	""	"68.3"	""	"59.5"	"2.0"	"76.0"	"73.7"	""	"454"	"9"	"33.000"	"26.000"	"2.76074222146726"	"19"	"0.004942"	"0.0537"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELDTVCR"	"[R].aELDTVcR.[H]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P29826"	"Rano class II histocompatibility antigen, B-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Bb PE=2 SV=1"	"P29826"	"Rano class II histocompatibility antigen, B-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Bb PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"591.29645"	"1181.58562"	"1181.58560"	"0.02"	"0.00001"	"4/62"	"4"	"62"	"695707.88458252"	"HCD"	"MS2"	"40.17142"	"38.5"	"100.000"	"68.9105"	"22984"	"22984"	"22965"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.9"	""	"64.6"	""	"58.0"	""	"47.1"	"1.1"	"65.4"	"68.8"	""	"448"	"6"	"33.000"	"26.000"	"5.13154354219981"	"13"	"0.005874"	"0.06686"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTSYTLR"	"[R].dPTSYTLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P00770"	"Mast cell protease 2 OS=Rattus norvegicus OX=10116 GN=Mcpt2 PE=1 SV=1"	"P00770"	"Mast cell protease 2 OS=Rattus norvegicus OX=10116 GN=Mcpt2 PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"591.32159"	"1181.63591"	"1181.63637"	"-0.39"	"-0.00023"	"6/66"	"6"	"66"	"5177266.93469238"	"HCD"	"MS2"	"9.826913"	"218.1"	"100.000"	"47.1483"	"14163"	"14163"	"14145"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"492.9"	""	"509.5"	""	"297.0"	""	"250.5"	""	"258.4"	"244.6"	""	"532"	"23"	"34.000"	"27.000"	"0.130281165952007"	"23"	"0.0008629"	"0.01064"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGADFAK"	"[K].dGADFAk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3;Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3; Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"591.33160"	"1181.65593"	"1181.65666"	"-0.62"	"-0.00036"	"10/54"	"10"	"54"	"2761226.0144043"	"HCD"	"MS2"	"45.46043"	"236.8"	"100.000"	"44.5645"	"13124"	"13124"	"13096"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"399.6"	""	"279.9"	""	"255.9"	""	"396.2"	""	"393.0"	"525.8"	""	"510"	"26"	"34.000"	"27.000"	"0.0718687647472436"	"26"	"0.002937"	"0.02792"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGADFAK"	"[K].dGADFAk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3;Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3; Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"591.33185"	"1181.65642"	"1181.65666"	"-0.20"	"-0.00012"	"10/54"	"10"	"54"	"14260549.762207"	"HCD"	"MS2"	"0"	"854.9"	"75.805"	"45.0150"	"13295"	"13295"	"13279"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1309.3"	""	"935.7"	""	"1006.8"	""	"1353.8"	""	"1434.5"	"2079.2"	""	"506"	"25"	"34.000"	"27.000"	"0.0889447914536594"	"27"	"0.006308"	"0.0715"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGADFAK"	"[K].dGADFAk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3;Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3; Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"591.33191"	"1181.65654"	"1181.65666"	"-0.10"	"-0.00006"	"10/54"	"10"	"54"	"3233647.39111328"	"HCD"	"MS2"	"8.360961"	"274.1"	"100.000"	"44.7162"	"13173"	"13173"	"13153"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"450.3"	""	"321.6"	""	"306.9"	""	"460.2"	""	"444.2"	"619.2"	""	"510"	"26"	"34.000"	"27.000"	"0.0697493525208212"	"26"	"0.003922"	"0.03974"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGADFAK"	"[K].dGADFAk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3;Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3; Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"591.33197"	"1181.65666"	"1181.65666"	"0.00"	"0.00000"	"10/54"	"10"	"54"	"15976784.6755981"	"HCD"	"MS2"	"0"	"1013.4"	"79.630"	"44.8563"	"13242"	"13242"	"13227"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1585.6"	""	"1086.7"	""	"1152.6"	""	"1617.7"	""	"1680.5"	"2505.7"	""	"510"	"25"	"34.000"	"27.000"	"0.0890307804470395"	"26"	"0.005427"	"0.06252"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEAEVHR"	"[R].lVEAEVHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P80385"	"5'-AMP-activated protein kinase subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Prkag1 PE=1 SV=3"	"P80385"	"5'-AMP-activated protein kinase subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Prkag1 PE=1 SV=3"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"394.56555"	"1181.68210"	"1181.68399"	"-1.60"	"-0.00063"	"5/60"	"5"	"60"	"2229022.52618408"	"HCD"	"MS2"	"34.81601"	"81.2"	"100.000"	"34.1084"	"8878"	"8878"	"8855"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"132.8"	""	"129.0"	""	"131.0"	""	"116.1"	""	"142.4"	"120.4"	""	"365"	"37"	"32.000"	"25.000"	"0.00342975319066596"	"18"	"0.001211"	"0.01468"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YWTQAER"	"[R].yWTQAER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"591.80865"	"1182.61003"	"1182.61049"	"-0.38"	"-0.00023"	"6/60"	"6"	"60"	"5731072.30023193"	"HCD"	"MS2"	"44.00869"	"357.5"	"100.000"	"43.7315"	"12788"	"12788"	"12776"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"392.4"	""	"341.9"	""	"292.8"	""	"636.4"	""	"838.9"	"910.1"	""	"434"	"32"	"33.000"	"26.000"	"0.0126025878602125"	"24"	"0.003449"	"0.03354"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YWTQAER"	"[R].yWTQAER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"591.80902"	"1182.61077"	"1182.61049"	"0.23"	"0.00014"	"5/60"	"5"	"60"	"1464218.02160645"	"HCD"	"MS2"	"17.07846"	"99.8"	"100.000"	"44.0993"	"12927"	"12927"	"12907"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"99.7"	""	"94.2"	""	"86.3"	""	"182.8"	""	"234.8"	"255.3"	""	"439"	"24"	"33.000"	"26.000"	"0.0896261053000258"	"24"	"0.004867"	"0.0522"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YWTQAER"	"[R].yWTQAER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"591.80920"	"1182.61113"	"1182.61049"	"0.54"	"0.00032"	"6/60"	"6"	"60"	"5434065.9274292"	"HCD"	"MS2"	"49.45317"	"338.7"	"100.000"	"43.8056"	"12808"	"12808"	"12796"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"378.9"	""	"346.5"	""	"292.9"	""	"589.5"	""	"783.3"	"838.5"	""	"421"	"27"	"33.000"	"26.000"	"0.0402950872216938"	"22"	"0.00379"	"0.03903"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEYEPFR"	"[K].iEYEPFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62780"	"Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus OX=10116 GN=Ddx46 PE=1 SV=1"	"Q62780"	"Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus OX=10116 GN=Ddx46 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"591.82147"	"1182.63567"	"1182.63564"	"0.02"	"0.00001"	"5/52"	"5"	"52"	"753008.686462402"	"HCD"	"MS2"	"9.276397"	"38.8"	"100.000"	"71.4568"	"24023"	"24023"	"24000"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.9"	""	"58.3"	""	"45.4"	""	"62.3"	"0.0"	"71.5"	"82.6"	""	"495"	"13"	"33.000"	"26.000"	"1.301892734317"	"13"	"0.005309"	"0.05979"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IENHEGVR"	"[K].iENHEGVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"591.82422"	"1182.64116"	"1182.64285"	"-1.43"	"-0.00085"	"7/72"	"7"	"72"	"3364168.20794678"	"HCD"	"MS2"	"0"	"145.0"	"100.000"	"21.6146"	"3826"	"3826"	"3804"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"247.1"	""	"191.2"	""	"197.1"	""	"210.3"	""	"236.7"	"291.4"	""	"480"	"30"	"33.000"	"26.000"	"0.0227620431192215"	"21"	"0.0008629"	"0.009905"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IENHEGVR"	"[K].iENHEGVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"394.88531"	"1182.64139"	"1182.64285"	"-1.23"	"-0.00049"	"6/72"	"6"	"72"	"18111903.5438843"	"HCD"	"MS2"	"8.722241"	"532.2"	"100.000"	"21.6329"	"3833"	"3833"	"3815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"853.0"	""	"705.3"	""	"725.4"	""	"814.1"	"7.0"	"930.0"	"1004.6"	""	"478"	"23"	"33.000"	"26.000"	"0.114920604279485"	"16"	"0.006505"	"0.07349"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GENLDHLR"	"[R].gENLDHLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"394.88535"	"1182.64148"	"1182.64285"	"-1.16"	"-0.00046"	"8/72"	"8"	"72"	"8910707.41296387"	"HCD"	"MS2"	"33.63084"	"318.4"	"100.000"	"29.1763"	"6883"	"6883"	"6864"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"368.0"	""	"368.1"	""	"362.0"	""	"548.5"	""	"688.0"	"696.0"	""	"478"	"27"	"33.000"	"26.000"	"0.0507455426418052"	"22"	"0.003449"	"0.03431"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GENLDHLR"	"[R].gENLDHLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"394.88541"	"1182.64167"	"1182.64285"	"-1.00"	"-0.00039"	"8/72"	"8"	"72"	"9255808.2399292"	"HCD"	"MS2"	"30.80676"	"291.9"	"84.325"	"29.2389"	"6896"	"6896"	"6875"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"349.8"	""	"334.7"	""	"349.3"	""	"503.6"	"1.2"	"610.9"	"623.1"	""	"478"	"20"	"33.000"	"26.000"	"0.248540919633145"	"20"	"0.002973"	"0.02826"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IENHEGVR"	"[K].iENHEGVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"394.88565"	"1182.64240"	"1182.64285"	"-0.38"	"-0.00015"	"5/72"	"5"	"72"	"18937679.2220459"	"HCD"	"MS2"	"8.359159"	"471.5"	"73.919"	"21.6721"	"3831"	"3831"	"3818"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"756.6"	""	"613.1"	""	"625.0"	""	"743.7"	"7.8"	"805.2"	"913.2"	""	"467"	"27"	"33.000"	"26.000"	"0.0443901778362091"	"17"	"0.001812"	"0.02045"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IENHEGVR"	"[K].iENHEGVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"591.82526"	"1182.64324"	"1182.64285"	"0.33"	"0.00019"	"7/72"	"7"	"72"	"3345509.328125"	"HCD"	"MS2"	"0"	"143.7"	"100.000"	"21.6607"	"3827"	"3827"	"3806"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"241.9"	""	"189.7"	""	"196.0"	""	"216.4"	""	"244.5"	"274.7"	""	"468"	"29"	"33.000"	"26.000"	"0.0287220780091067"	"20"	"0.0004639"	"0.007993"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDTLTDSR"	"[R].fDTLTDSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"592.31128"	"1183.61528"	"1183.61563"	"-0.30"	"-0.00018"	"8/66"	"8"	"66"	"2185052.69470215"	"HCD"	"MS2"	"4.969387"	"100.0"	"100.000"	"56.5685"	"18014"	"18014"	"17990"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"159.8"	""	"126.3"	""	"146.2"	""	"159.8"	""	"175.6"	"178.5"	""	"481"	"28"	"33.000"	"26.000"	"0.0371633692708989"	"22"	"0.002973"	"0.02966"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDTLTDSR"	"[R].fDTLTDSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"3"	"592.31140"	"1183.61553"	"1183.61563"	"-0.09"	"-0.00005"	"7/66"	"7"	"66"	"2043693.56915283"	"HCD"	"MS2"	"4.756382"	"99.2"	"100.000"	"56.7479"	"18073"	"18073"	"18052"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"162.9"	""	"126.0"	""	"128.2"	""	"169.5"	""	"173.4"	"180.1"	""	"485"	"24"	"33.000"	"26.000"	"0.101323863911806"	"20"	"0.001546"	"0.01947"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFVEFR"	"[R].eQFVEFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35783"	"Calumenin OS=Rattus norvegicus OX=10116 GN=Calu PE=1 SV=1"	"O35783"	"Calumenin OS=Rattus norvegicus OX=10116 GN=Calu PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"592.31860"	"1183.62993"	"1183.63089"	"-0.81"	"-0.00048"	"6/66"	"6"	"66"	"1741982.20397949"	"HCD"	"MS2"	"10.30232"	"88.4"	"100.000"	"64.9321"	"21378"	"21378"	"21358"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"135.9"	""	"141.6"	""	"127.6"	""	"149.6"	"0.3"	"148.2"	"132.3"	""	"492"	"29"	"33.000"	"26.000"	"0.0337236914476554"	"21"	"0.003507"	"0.03632"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFVEFR"	"[R].eQFVEFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35783"	"Calumenin OS=Rattus norvegicus OX=10116 GN=Calu PE=1 SV=1"	"O35783"	"Calumenin OS=Rattus norvegicus OX=10116 GN=Calu PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"592.31873"	"1183.63017"	"1183.63089"	"-0.60"	"-0.00036"	"6/66"	"6"	"66"	"3104350.95843506"	"HCD"	"MS2"	"0"	"148.3"	"100.000"	"65.2362"	"21502"	"21502"	"21485"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"229.4"	""	"241.5"	""	"226.8"	""	"233.2"	""	"266.2"	"205.0"	""	"491"	"27"	"33.000"	"26.000"	"0.046671471772117"	"20"	"0.004676"	"0.05028"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFVEFR"	"[R].eQFVEFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35783"	"Calumenin OS=Rattus norvegicus OX=10116 GN=Calu PE=1 SV=1"	"O35783"	"Calumenin OS=Rattus norvegicus OX=10116 GN=Calu PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"592.31885"	"1183.63042"	"1183.63089"	"-0.40"	"-0.00024"	"6/66"	"6"	"66"	"1794137.18121338"	"HCD"	"MS2"	"0"	"90.6"	"100.000"	"65.0283"	"21402"	"21402"	"21383"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"154.7"	""	"139.1"	""	"149.3"	""	"135.6"	""	"151.8"	"124.9"	""	"477"	"31"	"33.000"	"26.000"	"0.0209646870264166"	"24"	"0.003111"	"0.03063"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFVEFR"	"[R].eQFVEFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35783"	"Calumenin OS=Rattus norvegicus OX=10116 GN=Calu PE=1 SV=1"	"O35783"	"Calumenin OS=Rattus norvegicus OX=10116 GN=Calu PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"592.31897"	"1183.63066"	"1183.63089"	"-0.19"	"-0.00011"	"6/66"	"6"	"66"	"3031064.49853516"	"HCD"	"MS2"	"0"	"142.1"	"100.000"	"65.3140"	"21518"	"21518"	"21502"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"230.6"	""	"214.2"	""	"217.4"	""	"227.2"	""	"243.8"	"210.7"	""	"488"	"29"	"33.000"	"26.000"	"0.030157117376046"	"23"	"0.003922"	"0.04053"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"592.32855"	"1183.64983"	"1183.65202"	"-1.85"	"-0.00110"	"6/62"	"6"	"62"	"1694663.65985107"	"HCD"	"MS2"	"34.77578"	"86.9"	"100.000"	"39.2326"	"10948"	"10948"	"10931"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"108.3"	""	"98.8"	""	"111.0"	""	"142.9"	"0.6"	"184.5"	"179.4"	""	"449"	"38"	"33.000"	"26.000"	"0.00332825310115267"	"26"	"0.008668"	"0.1111"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"592.32928"	"1183.65129"	"1183.65202"	"-0.61"	"-0.00036"	"6/62"	"6"	"62"	"12284419.5592651"	"HCD"	"MS2"	"26.09841"	"378.2"	"100.000"	"47.4574"	"14302"	"14302"	"14286"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"344.1"	""	"282.8"	""	"308.1"	""	"943.0"	""	"891.9"	"833.5"	""	"458"	"47"	"33.000"	"26.000"	"0.000440388005920426"	""	"0.0001301"	"0.004549"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"592.32941"	"1183.65154"	"1183.65202"	"-0.41"	"-0.00024"	"7/62"	"7"	"62"	"11507542.7498779"	"HCD"	"MS2"	"25.85034"	"330.6"	"89.484"	"47.7971"	"14428"	"14428"	"14410"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"301.0"	""	"237.3"	""	"247.4"	""	"810.8"	""	"822.8"	"740.9"	""	"456"	"64"	"33.000"	"26.000"	"9.57050483499495E-06"	""	"0"	"0.002804"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"592.33032"	"1183.65337"	"1183.65202"	"1.14"	"0.00067"	"7/62"	"7"	"62"	"1438249.05010986"	"HCD"	"MS2"	"11.43239"	"68.0"	"100.000"	"48.1375"	"14566"	"14566"	"14547"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"74.5"	""	"62.2"	""	"73.2"	""	"152.8"	""	"148.0"	"140.4"	""	"459"	"44"	"33.000"	"26.000"	"0.00100642795139359"	""	"0.004606"	"0.04958"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEAVADVR"	"[R].vPEAVADVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P24483"	"Adrenodoxin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fdx1 PE=2 SV=1"	"P24483"	"Adrenodoxin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fdx1 PE=2 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"592.84491"	"1184.68254"	"1184.68365"	"-0.94"	"-0.00056"	"6/72"	"6"	"72"	"1188605.69830322"	"HCD"	"MS2"	"33.69624"	"39.2"	"100.000"	"55.0484"	"17394"	"17394"	"17368"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.0"	""	"48.7"	""	"58.2"	""	"57.0"	""	"72.1"	"71.8"	""	"407"	"35"	"33.000"	"26.000"	"0.00722045247090325"	"21"	"0.0004639"	"0.00772"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEAVADVR"	"[R].vPEAVADVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P24483"	"Adrenodoxin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fdx1 PE=2 SV=1"	"P24483"	"Adrenodoxin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fdx1 PE=2 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"592.84540"	"1184.68352"	"1184.68365"	"-0.11"	"-0.00007"	"10/72"	"10"	"72"	"1141872.89666748"	"HCD"	"MS2"	"14.94646"	"37.2"	"100.000"	"55.2829"	"17476"	"17476"	"17447"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.2"	""	"45.5"	""	"51.6"	""	"60.6"	"0.6"	"63.0"	"68.9"	""	"401"	"33"	"33.000"	"26.000"	"0.00948668274217768"	"21"	"0"	"0.0006108"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFQYIDR"	"[K].dFQYIDR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"Q9Z1Z3"	"Epsin-2 OS=Rattus norvegicus OX=10116 GN=Epn2 PE=1 SV=1"	"Q4V882; Q9Z1Z3"	"Epsin-3 OS=Rattus norvegicus OX=10116 GN=Epn3 PE=1 SV=1; Epsin-2 OS=Rattus norvegicus OX=10116 GN=Epn2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.30847"	"1185.60967"	"1185.61015"	"-0.41"	"-0.00024"	"6/66"	"6"	"66"	"1882533.70471191"	"HCD"	"MS2"	"39.378"	"95.4"	"100.000"	"57.8095"	"18505"	"18505"	"18482"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"147.0"	""	"117.3"	""	"122.1"	""	"159.0"	"0.8"	"177.0"	"181.0"	""	"403"	"27"	"33.000"	"26.000"	"0.0414261955090805"	"14"	"0.001886"	"0.02104"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFQYIDR"	"[K].dFQYIDR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"Q9Z1Z3"	"Epsin-2 OS=Rattus norvegicus OX=10116 GN=Epn2 PE=1 SV=1"	"Q4V882; Q9Z1Z3"	"Epsin-3 OS=Rattus norvegicus OX=10116 GN=Epn3 PE=1 SV=1; Epsin-2 OS=Rattus norvegicus OX=10116 GN=Epn2 PE=1 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"593.30865"	"1185.61003"	"1185.61015"	"-0.10"	"-0.00006"	"4/66"	"4"	"66"	"2324872.17980957"	"HCD"	"MS2"	"40.61631"	"113.2"	"100.000"	"57.6209"	"18443"	"18443"	"18421"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"193.1"	""	"116.4"	""	"134.4"	""	"191.7"	"0.9"	"194.6"	"241.6"	""	"413"	"24"	"33.000"	"26.000"	"0.0785091103401959"	"19"	"0.002056"	"0.02252"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYSALMR"	"[K].eSYSALMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"593.30975"	"1185.61223"	"1185.61352"	"-1.09"	"-0.00065"	"6/62"	"6"	"62"	"1044578.34072876"	"HCD"	"MS2"	"48.59302"	"53.9"	"100.000"	"52.8685"	"16496"	"16496"	"16471"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.8"	""	"78.2"	""	"81.5"	""	"68.0"	""	"94.7"	"101.8"	""	"431"	"12"	"33.000"	"26.000"	"1.22305862465542"	"15"	"0.008668"	"0.1101"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHLWTDR"	"[R].eHLWTDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI43"	"Matrix remodeling-associated protein 8 OS=Rattus norvegicus OX=10116 GN=Mxra8 PE=1 SV=1"	"Q5XI43"	"Matrix remodeling-associated protein 8 OS=Rattus norvegicus OX=10116 GN=Mxra8 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"395.87741"	"1185.61768"	"1185.62139"	"-3.13"	"-0.00124"	"5/58"	"5"	"58"	"1166521.5970459"	"HCD"	"MS2"	"45.55433"	"49.0"	"100.000"	"35.5010"	"9439"	"9439"	"9410"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.9"	""	"60.0"	""	"65.7"	""	"83.7"	""	"96.2"	"89.8"	""	"427"	"16"	"33.000"	"26.000"	"0.561562216269664"	"13"	"0.009021"	"0.1162"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADNLIPGTR"	"[R].aDNLIPGTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"593.34229"	"1185.67729"	"1185.67890"	"-1.36"	"-0.00080"	"6/88"	"6"	"88"	"934830.03704834"	"HCD"	"MS2"	"37.96778"	"48.2"	"100.000"	"52.8723"	"16509"	"16509"	"16481"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.6"	""	"61.3"	""	"56.4"	""	"78.3"	"2.3"	"90.8"	"97.8"	""	"481"	"15"	"33.000"	"26.000"	"0.841618126703199"	"20"	"0.001465"	"0.01833"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADNLIPGTR"	"[R].aDNLIPGTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"593.34308"	"1185.67888"	"1185.67890"	"-0.02"	"-0.00001"	"7/88"	"7"	"88"	"952670.142944336"	"HCD"	"MS2"	"28.58332"	"47.6"	"100.000"	"53.1332"	"16604"	"16604"	"16579"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"73.5"	""	"60.3"	""	"56.0"	""	"79.4"	"1.1"	"80.9"	"100.1"	""	"476"	"20"	"33.000"	"26.000"	"0.251522567192851"	"16"	"0.002467"	"0.02489"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TELQSALLLR"	"[M].tELQSALLLR.[R]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P62255"	"Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus OX=10116 GN=Ube2g1 PE=2 SV=3"	"P62255"	"Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus OX=10116 GN=Ube2g1 PE=2 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"593.34509"	"1185.68291"	"1185.68376"	"-0.72"	"-0.00043"	"7/92"	"7"	"92"	"519993.412841797"	"HCD"	"MS2"	"59.40254"	"5.8"	"100.000"	"108.3620"	"37714"	"37714"	"37708"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.5"	""	"8.3"	""	"9.4"	""	"8.2"	""	"11.8"	"8.6"	"NoQuanLabels"	"466"	"35"	"33.000"	"26.000"	"0.00821024129528994"	"21"	"0"	"0.002192"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TELQSALLLR"	"[M].tELQSALLLR.[R]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P62255"	"Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus OX=10116 GN=Ube2g1 PE=2 SV=3"	"P62255"	"Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus OX=10116 GN=Ube2g1 PE=2 SV=3"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"593.34521"	"1185.68315"	"1185.68376"	"-0.52"	"-0.00031"	"7/92"	"7"	"92"	"583894.164794922"	"HCD"	"MS2"	"61.97539"	"5.7"	"100.000"	"108.3182"	"37785"	"37785"	"37775"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.8"	""	"6.5"	""	"6.8"	""	"9.4"	""	"9.1"	"13.2"	"NoQuanLabels"	"466"	"39"	"33.000"	"26.000"	"0.00305742576471474"	"23"	"0"	"0.001021"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVEEYDR"	"[R].fVEEYDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"593.80017"	"1186.59307"	"1186.59417"	"-0.93"	"-0.00055"	"10/54"	"10"	"54"	"4141576.55224609"	"HCD"	"MS2"	"8.339758"	"210.3"	"100.000"	"50.7387"	"15638"	"15638"	"15620"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"216.4"	""	"230.0"	""	"211.6"	""	"368.0"	""	"472.8"	"505.7"	""	"378"	"36"	"32.000"	"25.000"	"0.00460746244671694"	"24"	"0.002711"	"0.02598"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVEEYDR"	"[R].fVEEYDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"593.80078"	"1186.59429"	"1186.59417"	"0.10"	"0.00006"	"10/54"	"10"	"54"	"10730467.4423828"	"HCD"	"MS2"	"3.162183"	"453.0"	"90.012"	"51.0221"	"15754"	"15754"	"15739"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"419.1"	""	"449.4"	""	"425.3"	""	"795.5"	""	"1045.5"	"1185.3"	""	"391"	"36"	"32.000"	"25.000"	"0.00450969075394774"	"25"	"0.002973"	"0.02987"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVEEYDR"	"[R].fVEEYDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"593.80090"	"1186.59453"	"1186.59417"	"0.30"	"0.00018"	"10/54"	"10"	"54"	"5067597.86920166"	"HCD"	"MS2"	"8.133642"	"269.0"	"100.000"	"51.0805"	"15766"	"15766"	"15746"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"276.1"	""	"283.5"	""	"236.9"	""	"479.7"	"0.6"	"607.0"	"677.8"	""	"387"	"33"	"32.000"	"25.000"	"0.0108313095889304"	"24"	"0.002973"	"0.02873"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVEEYDR"	"[R].fVEEYDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"593.80103"	"1186.59477"	"1186.59417"	"0.51"	"0.00030"	"10/54"	"10"	"54"	"9702508.13592529"	"HCD"	"MS2"	"4.213337"	"443.1"	"100.000"	"51.3682"	"15884"	"15884"	"15869"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"401.6"	""	"439.3"	""	"430.0"	""	"759.0"	""	"1057.9"	"1141.4"	""	"388"	"36"	"32.000"	"25.000"	"0.00453734424299914"	"25"	"0.003111"	"0.03162"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYGAQTVR"	"[K].yYGAQTVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.82397"	"1186.64067"	"1186.64179"	"-0.94"	"-0.00056"	"6/62"	"6"	"62"	"3290100.47412109"	"HCD"	"MS2"	"9.029843"	"172.8"	"100.000"	"35.2098"	"9325"	"9325"	"9306"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"321.8"	""	"256.8"	""	"259.0"	""	"205.9"	""	"277.2"	"315.0"	""	"563"	"34"	"34.000"	"27.000"	"0.0116005451625898"	"15"	"0.0008629"	"0.009965"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVYEVIY"	"[K].aTVYEVIY.[-]"	"N-Term(TMT6plex)"	"1"	"2"	"Q9JIT3"	"Transducin-like enhancer protein 3 OS=Rattus norvegicus OX=10116 GN=Tle3 PE=1 SV=1"	"Q9JIT3; Q07141"	"Transducin-like enhancer protein 3 OS=Rattus norvegicus OX=10116 GN=Tle3 PE=1 SV=1; Transducin-like enhancer protein 4 OS=Rattus norvegicus OX=10116 GN=Tle4 PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"593.83105"	"1186.65483"	"1186.65571"	"-0.74"	"-0.00044"	"4/64"	"4"	"64"	"191111.188110352"	"HCD"	"MS2"	"53.76192"	"4.8"	"100.000"	"102.0410"	"35634"	"35634"	"35630"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.1"	""	"8.5"	""	"9.2"	""	"8.5"	""	"7.4"	"7.1"	""	"542"	"16"	"34.000"	"27.000"	"0.62225628363845"	"14"	"0.008522"	"0.1044"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEGSPADR"	"[R].iIEGSPADR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4L1J4"	"Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Magi1 PE=1 SV=1"	"Q4L1J4"	"Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Magi1 PE=1 SV=1"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"593.83447"	"1186.66167"	"1186.66292"	"-1.05"	"-0.00062"	"6/74"	"6"	"74"	"915945.703796387"	"HCD"	"MS2"	"20.0337"	"61.5"	"100.000"	"41.1713"	"11746"	"11746"	"11722"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.8"	""	"70.2"	""	"96.8"	""	"87.8"	"1.2"	"111.2"	"124.8"	""	"558"	"15"	"34.000"	"27.000"	"0.868168858052578"	"21"	"0.004606"	"0.04987"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAPESVIER"	"[K].gAPESVIER.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P18596"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2"	"P18596"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"593.83447"	"1186.66167"	"1186.66292"	"-1.05"	"-0.00062"	"6/72"	"6"	"72"	"1269934.96185303"	"HCD"	"MS2"	"37.41568"	"67.8"	"100.000"	"39.3815"	"11018"	"11018"	"10991"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.8"	""	"66.6"	""	"74.1"	""	"126.2"	""	"147.4"	"160.8"	""	"558"	"31"	"34.000"	"27.000"	"0.0211156377710852"	"17"	"0.003922"	"0.03931"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAPESVIER"	"[K].gAPESVIER.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P18596"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2"	"P18596"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"593.83459"	"1186.66191"	"1186.66292"	"-0.85"	"-0.00050"	"6/72"	"6"	"72"	"1163741.56689453"	"HCD"	"MS2"	"44.69825"	"65.5"	"100.000"	"39.5570"	"11080"	"11080"	"11054"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"82.8"	""	"60.4"	""	"73.0"	""	"120.5"	""	"141.6"	"145.0"	""	"559"	"31"	"34.000"	"27.000"	"0.0215964223534249"	"17"	"0.003111"	"0.03158"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEQDISR"	"[R].lPEQDISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P70483"	"Striatin OS=Rattus norvegicus OX=10116 GN=Strn PE=1 SV=1"	"P70483"	"Striatin OS=Rattus norvegicus OX=10116 GN=Strn PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"593.83466"	"1186.66203"	"1186.66292"	"-0.74"	"-0.00044"	"6/72"	"6"	"72"	"1677093.48815918"	"HCD"	"MS2"	"33.83772"	"76.5"	"100.000"	"45.6363"	"13560"	"13560"	"13534"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"82.8"	""	"77.1"	""	"94.9"	""	"140.9"	""	"168.7"	"169.1"	""	"559"	"20"	"34.000"	"27.000"	"0.30858997426263"	"17"	"0.005874"	"0.06679"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QENAGLLGR"	"[R].qENAGLLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"593.84027"	"1186.67327"	"1186.67415"	"-0.75"	"-0.00044"	"7/80"	"7"	"80"	"1818836.98272705"	"HCD"	"MS2"	"28.01053"	"94.8"	"100.000"	"39.0717"	"10883"	"10883"	"10853"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"144.7"	""	"120.9"	""	"128.1"	""	"161.8"	""	"171.9"	"171.4"	""	"531"	"44"	"34.000"	"27.000"	"0.000995553320961759"	"25"	"0"	"0.0002599"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQNGAQGIR"	"[K].iqNGAQGIR.[F]"	"N-Term(TMT6plex); Q2(Deamidated)"	"1"	"1"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"2"	"2"	"0.0870"	"0.0000"	"1"	"1"	"1"	"593.84070"	"1186.67412"	"1186.67415"	"-0.03"	"-0.00002"	"8/80"	"8"	"80"	"5849562.29278564"	"HCD"	"MS2"	"2.243187"	"251.2"	"100.000"	"36.9186"	"10019"	"10019"	"9999"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"322.5"	""	"256.8"	""	"260.8"	""	"465.8"	""	"548.4"	"553.2"	""	"527"	"23"	"34.000"	"27.000"	"0.144804020261484"	"26"	"0.0002479"	"0.005523"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QENAGLLGR"	"[R].qENAGLLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"593.84076"	"1186.67424"	"1186.67415"	"0.08"	"0.00005"	"7/80"	"7"	"80"	"1863556.47717285"	"HCD"	"MS2"	"16.57687"	"102.1"	"100.000"	"38.8985"	"10821"	"10821"	"10796"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"148.2"	""	"130.3"	""	"129.2"	""	"172.1"	"0.1"	"193.4"	"194.7"	""	"527"	"42"	"34.000"	"27.000"	"0.00170129889350632"	"24"	"0"	"0.0003774"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQNGAQGIR"	"[K].iQnGAQGIR.[F]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"593.84088"	"1186.67449"	"1186.67415"	"0.28"	"0.00017"	"7/80"	"7"	"80"	"5639434.59887695"	"HCD"	"MS2"	"2.733712"	"234.8"	"100.000"	"37.0943"	"10085"	"10085"	"10064"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"368.3"	""	"222.4"	""	"262.1"	""	"430.3"	"0.2"	"477.2"	"467.2"	""	"526"	"40"	"34.000"	"27.000"	"0.00271616249715248"	"27"	"0"	"0.0007202"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQNGAQGIR"	"[K].iQnGAQGIR.[F]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"593.84100"	"1186.67473"	"1186.67415"	"0.49"	"0.00029"	"6/80"	"6"	"80"	"618069.796264648"	"HCD"	"MS2"	"0"	"42.9"	"100.000"	"37.4043"	"10212"	"10212"	"10184"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.8"	""	"47.4"	""	"53.7"	""	"75.9"	"1.3"	"83.1"	"87.0"	""	"526"	"33"	"34.000"	"27.000"	"0.0121886539890644"	"23"	"0.0001301"	"0.00464"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIQDAINR"	"[K].qIQDAINR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P19511"	"ATP synthase F(0) complex subunit B1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pb PE=1 SV=1"	"P19511"	"ATP synthase F(0) complex subunit B1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pb PE=1 SV=1"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"593.84113"	"1186.67497"	"1186.67415"	"0.69"	"0.00041"	"6/70"	"6"	"70"	"3822138.58453369"	"HCD"	"MS2"	"9.156171"	"180.2"	"100.000"	"39.8163"	"11186"	"11186"	"11165"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"240.4"	""	"186.8"	""	"186.8"	""	"336.0"	""	"382.5"	"384.0"	""	"526"	"37"	"34.000"	"27.000"	"0.00487478816958096"	""	"0"	"0.003437"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIQDAINR"	"[K].qIQDAINR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P19511"	"ATP synthase F(0) complex subunit B1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pb PE=1 SV=1"	"P19511"	"ATP synthase F(0) complex subunit B1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pb PE=1 SV=1"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"593.84119"	"1186.67510"	"1186.67415"	"0.80"	"0.00047"	"6/70"	"6"	"70"	"3188012.27087402"	"HCD"	"MS2"	"13.23168"	"148.6"	"100.000"	"39.5811"	"11099"	"11099"	"11080"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"191.9"	""	"156.1"	""	"160.2"	""	"279.8"	"1.3"	"310.6"	"311.9"	""	"525"	"37"	"34.000"	"27.000"	"0.00489924668844101"	""	"0.0001301"	"0.004673"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLELQDAR"	"[R].lLELQDAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FW7"	"Threonine--tRNA ligase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tars2 PE=2 SV=1"	"Q68FW7"	"Threonine--tRNA ligase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tars2 PE=2 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"593.85272"	"1186.69817"	"1186.69930"	"-0.96"	"-0.00057"	"6/68"	"6"	"68"	"353977.490966797"	"HCD"	"MS2"	"34.01891"	"18.2"	"100.000"	"70.8084"	"23772"	"23772"	"23748"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.1"	""	"22.2"	""	"27.4"	""	"32.6"	""	"35.1"	"29.2"	""	"563"	"11"	"34.000"	"27.000"	"2.42928461196402"	"16"	"0.005829"	"0.06472"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLEEAALR"	"[R].rLEEAALR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2X6"	"Coiled-coil domain-containing protein 47 OS=Rattus norvegicus OX=10116 GN=Ccdc47 PE=2 SV=1"	"Q5U2X6"	"Coiled-coil domain-containing protein 47 OS=Rattus norvegicus OX=10116 GN=Ccdc47 PE=2 SV=1"	"1"	"3"	"3"	"0.7027"	"0.0000"	"1"	"1"	"1"	"396.24088"	"1186.70807"	"1186.71054"	"-2.08"	"-0.00082"	"6/72"	"6"	"72"	"1763280.87463379"	"HCD"	"MS2"	"33.8012"	"78.6"	"100.000"	"32.4117"	"8193"	"8193"	"8164"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"108.6"	""	"90.9"	""	"102.5"	""	"139.2"	""	"156.9"	"152.8"	""	"545"	"37"	"34.000"	"27.000"	"0.00543708980829019"	"26"	"0.002795"	"0.02642"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLEEAALR"	"[R].rLEEAALR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2X6"	"Coiled-coil domain-containing protein 47 OS=Rattus norvegicus OX=10116 GN=Ccdc47 PE=2 SV=1"	"Q5U2X6"	"Coiled-coil domain-containing protein 47 OS=Rattus norvegicus OX=10116 GN=Ccdc47 PE=2 SV=1"	"1"	"3"	"3"	"0.6279"	"0.0000"	"1"	"1"	"1"	"396.24094"	"1186.70826"	"1186.71054"	"-1.92"	"-0.00076"	"7/72"	"7"	"72"	"2653234.62854004"	"HCD"	"MS2"	"7.172686"	"87.4"	"100.000"	"32.5294"	"8234"	"8234"	"8211"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"105.4"	""	"110.7"	""	"114.7"	""	"145.6"	"0.1"	"179.5"	"173.4"	""	"545"	"43"	"34.000"	"27.000"	"0.00139433300184734"	""	"0.003449"	"0.03263"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNLDDYR"	"[R].yNLDDYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"594.29797"	"1187.58867"	"1187.58942"	"-0.63"	"-0.00037"	"4/60"	"4"	"60"	"1156699.62854004"	"HCD"	"MS2"	"38.02383"	"61.8"	"100.000"	"53.6689"	"16834"	"16834"	"16812"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"93.1"	""	"66.4"	""	"73.0"	""	"103.5"	"0.1"	"131.3"	"119.1"	""	"392"	"22"	"32.000"	"25.000"	"0.128308690117186"	"19"	"0.004069"	"0.04411"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNLDDYR"	"[R].yNLDDYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"594.29828"	"1187.58928"	"1187.58942"	"-0.12"	"-0.00007"	"4/60"	"4"	"60"	"1281006.58288574"	"HCD"	"MS2"	"29.63987"	"67.7"	"100.000"	"53.9845"	"16952"	"16952"	"16928"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"100.8"	""	"67.3"	""	"83.9"	""	"110.8"	""	"140.7"	"144.5"	""	"399"	"20"	"32.000"	"26.000"	"0.181946162451504"	"18"	"0.008641"	"0.1075"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSNAYAR"	"[R].yLSnAYAR.[E]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"594.31616"	"1187.62505"	"1187.62580"	"-0.64"	"-0.00038"	"6/64"	"6"	"64"	"1286914.8661499"	"HCD"	"MS2"	"18.31867"	"74.9"	"100.000"	"48.7753"	"14839"	"14839"	"14815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"118.8"	""	"79.0"	""	"99.0"	""	"127.2"	"0.8"	"142.1"	"142.9"	""	"561"	"34"	"34.000"	"27.000"	"0.0109630871269769"	"20"	"0.0004639"	"0.007949"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSNAYAR"	"[R].yLSnAYAR.[E]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"594.31659"	"1187.62590"	"1187.62580"	"0.08"	"0.00005"	"6/64"	"6"	"64"	"1062453.8762207"	"HCD"	"MS2"	"22.11475"	"64.4"	"100.000"	"49.1860"	"14994"	"14994"	"14966"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"85.1"	""	"83.0"	""	"81.6"	""	"118.1"	""	"118.3"	"124.8"	""	"552"	"19"	"34.000"	"27.000"	"0.319822550298815"	"16"	"0.000936"	"0.01136"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPIAASTNR"	"[K].ePIAASTNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"594.33203"	"1187.65679"	"1187.65817"	"-1.16"	"-0.00069"	"8/78"	"8"	"78"	"1314353.22302246"	"HCD"	"MS2"	"15.41884"	"59.6"	"100.000"	"27.6797"	"6276"	"6276"	"6247"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.7"	""	"63.6"	""	"62.9"	""	"85.7"	""	"125.9"	"160.6"	""	"573"	"27"	"34.000"	"27.000"	"0.0514191184087519"	"23"	"0.0002479"	"0.005263"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLENAEGAR"	"[K].vLENAEGAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"594.33295"	"1187.65862"	"1187.65817"	"0.38"	"0.00023"	"7/80"	"7"	"80"	"5203808.09082031"	"HCD"	"MS2"	"17.08514"	"264.0"	"100.000"	"35.6462"	"9502"	"9502"	"9481"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"352.1"	""	"317.6"	""	"339.5"	""	"418.6"	""	"511.3"	"572.7"	""	"588"	"43"	"34.000"	"27.000"	"0.00155362904021903"	"23"	"0"	"0.0009474"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPIAASTNR"	"[K].ePIAASTNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"594.33301"	"1187.65874"	"1187.65817"	"0.48"	"0.00029"	"6/78"	"6"	"78"	"1378598.27209473"	"HCD"	"MS2"	"20.07691"	"65.3"	"100.000"	"27.7007"	"6269"	"6269"	"6248"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.4"	""	"66.4"	""	"69.2"	""	"87.7"	""	"144.2"	"177.5"	""	"588"	"37"	"34.000"	"27.000"	"0.00612840319630602"	"18"	"0"	"0.0003934"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLENAEGAR"	"[K].vLENAEGAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"594.33301"	"1187.65874"	"1187.65817"	"0.48"	"0.00029"	"6/80"	"6"	"80"	"3568844.11663818"	"HCD"	"MS2"	"22.75485"	"185.4"	"100.000"	"35.7260"	"9530"	"9530"	"9514"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"250.8"	""	"220.6"	""	"220.0"	""	"304.8"	""	"389.2"	"375.8"	""	"588"	"27"	"34.000"	"27.000"	"0.0577227921389797"	"24"	"0"	"0.00183"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEPPVPTR"	"[K].yEPPVPTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.33411"	"1187.66094"	"1187.66219"	"-1.06"	"-0.00063"	"5/66"	"5"	"66"	"1298205.3371582"	"HCD"	"MS2"	"25.50647"	"75.0"	"100.000"	"46.6361"	"13966"	"13966"	"13949"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"114.0"	""	"96.2"	""	"105.8"	""	"115.7"	"2.6"	"146.3"	"129.8"	""	"647"	"19"	"35.000"	"28.000"	"0.418672354709071"	"14"	"0.005921"	"0.06825"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEPPVPTR"	"[K].yEPPVPTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"594.33435"	"1187.66142"	"1187.66219"	"-0.64"	"-0.00038"	"4/66"	"4"	"66"	"2005063.66168213"	"HCD"	"MS2"	"17.95135"	"117.5"	"100.000"	"46.9672"	"14101"	"14101"	"14078"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"152.7"	""	"153.0"	""	"191.3"	""	"196.1"	""	"217.7"	"209.7"	""	"647"	"15"	"35.000"	"28.000"	"0.974707448824211"	"18"	"0.009021"	"0.1161"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEPPVPTR"	"[K].yEPPVPTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.33441"	"1187.66155"	"1187.66219"	"-0.54"	"-0.00032"	"5/66"	"5"	"66"	"1967080.23126221"	"HCD"	"MS2"	"25.46246"	"105.0"	"100.000"	"47.0379"	"14118"	"14118"	"14097"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"144.6"	""	"141.0"	""	"164.9"	""	"166.4"	"0.9"	"202.1"	"174.8"	""	"647"	"20"	"35.000"	"28.000"	"0.353080948841173"	"14"	"0.003717"	"0.03832"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LVIEEAER"	"[K].lVIEEAER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"594.34491"	"1187.68254"	"1187.68332"	"-0.65"	"-0.00039"	"5/62"	"5"	"62"	"2008300.27764893"	"HCD"	"MS2"	"10.99117"	"92.4"	"100.000"	"57.2313"	"18270"	"18270"	"18254"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"133.9"	""	"111.1"	""	"120.2"	""	"160.4"	"3.4"	"173.8"	"173.4"	""	"697"	"31"	"35.000"	"28.000"	"0.0271145738037372"	"27"	"0.0001301"	"0.004727"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LVIEQAER"	"[].lVIEqAER.[]"	"N-Term(TMT6plex); Q5(Deamidated)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"594.34491"	"1187.68254"	"1187.68332"	"-0.65"	"-0.00039"	"5/68"	"5"	"68"	"2008300.27764893"	"HCD"	"MS2"	"10.99117"	"92.4"	"100.000"	"57.2313"	"18270"	"18270"	"18254"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"133.9"	""	"111.1"	""	"120.2"	""	"160.4"	"3.4"	"173.8"	"173.4"	""	"697"	"31"	"35.000"	"28.000"	"0.0271145738037372"	"27"	"0.0001301"	"0.004728"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LVIEEAER"	"[K].lVIEEAER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"594.34491"	"1187.68254"	"1187.68332"	"-0.65"	"-0.00039"	"5/62"	"5"	"62"	"2006065.14428711"	"HCD"	"MS2"	"12.7932"	"88.2"	"100.000"	"57.0519"	"18211"	"18211"	"18195"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"124.9"	""	"113.6"	""	"118.5"	""	"148.2"	"1.9"	"164.1"	"165.2"	""	"697"	"31"	"35.000"	"28.000"	"0.0274917750990066"	"26"	"0.0001301"	"0.004951"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LVIEQAER"	"[].lVIEqAER.[]"	"N-Term(TMT6plex); Q5(Deamidated)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"594.34491"	"1187.68254"	"1187.68332"	"-0.65"	"-0.00039"	"5/68"	"5"	"68"	"2006065.14428711"	"HCD"	"MS2"	"12.7932"	"88.2"	"100.000"	"57.0519"	"18211"	"18211"	"18195"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"124.9"	""	"113.6"	""	"118.5"	""	"148.2"	"1.9"	"164.1"	"165.2"	""	"697"	"31"	"35.000"	"28.000"	"0.0274917750990066"	"26"	"0.0001301"	"0.004952"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVDNLALR"	"[R].sAVDNLALR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H86"	"Olfactomedin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Olfml1 PE=2 SV=1"	"Q66H86"	"Olfactomedin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Olfml1 PE=2 SV=1"	"0"	"2"	"2"	"0.6739"	"0.0000"	"1"	"1"	"1"	"594.35028"	"1187.69328"	"1187.69455"	"-1.07"	"-0.00063"	"7/78"	"7"	"78"	"1730108.57177734"	"HCD"	"MS2"	"0"	"87.5"	"100.000"	"55.0029"	"17362"	"17362"	"17346"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"99.0"	""	"95.0"	""	"89.6"	""	"168.6"	""	"181.4"	"201.1"	""	"676"	"46"	"35.000"	"28.000"	"0.000805223980643237"	""	"0"	"0.0002616"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVDNLALR"	"[R].sAVDNLALR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H86"	"Olfactomedin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Olfml1 PE=2 SV=1"	"Q66H86"	"Olfactomedin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Olfml1 PE=2 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"594.35034"	"1187.69341"	"1187.69455"	"-0.96"	"-0.00057"	"7/78"	"7"	"78"	"1567320.39251709"	"HCD"	"MS2"	"0"	"79.1"	"100.000"	"54.7472"	"17271"	"17271"	"17255"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"80.4"	""	"76.2"	""	"87.4"	""	"150.5"	"0.7"	"175.0"	"182.2"	""	"674"	"48"	"35.000"	"28.000"	"0.000507726581304932"	""	"0"	"0.0003401"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQSVEQIR"	"[R].vQSVEQIR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q9EQH5"	"C-terminal-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ctbp2 PE=1 SV=2"	"Q9EQH5; Q9Z2F5"	"C-terminal-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ctbp2 PE=1 SV=2; C-terminal-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ctbp1 PE=1 SV=3"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"594.35107"	"1187.69487"	"1187.69455"	"0.27"	"0.00016"	"6/72"	"6"	"72"	"3870242.30883789"	"HCD"	"MS2"	"34.3558"	"162.0"	"100.000"	"43.8581"	"12829"	"12829"	"12814"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"243.5"	""	"201.5"	""	"217.3"	""	"268.7"	""	"300.0"	"306.3"	""	"671"	"25"	"35.000"	"28.000"	"0.103918417488716"	"23"	"0.000936"	"0.01322"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQSVEQIR"	"[R].vQSVEQIR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q9EQH5"	"C-terminal-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ctbp2 PE=1 SV=2"	"Q9EQH5; Q9Z2F5"	"C-terminal-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ctbp2 PE=1 SV=2; C-terminal-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ctbp1 PE=1 SV=3"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"594.35114"	"1187.69499"	"1187.69455"	"0.37"	"0.00022"	"6/72"	"6"	"72"	"3804393.93560791"	"HCD"	"MS2"	"36.79661"	"157.3"	"100.000"	"43.7358"	"12790"	"12790"	"12776"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"246.4"	""	"200.8"	""	"226.0"	""	"242.2"	"0.3"	"293.1"	"281.1"	""	"671"	"25"	"35.000"	"28.000"	"0.100621902512036"	"23"	"0.0008629"	"0.01015"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAATPGQK"	"[R].gAATPGQk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"1"	"594.36066"	"1187.71404"	"1187.71484"	"-0.68"	"-0.00040"	"4/58"	"4"	"58"	"910803.49597168"	"HCD"	"MS2"	"0"	"62.5"	"100.000"	"24.9649"	"5175"	"5175"	"5157"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.0"	""	"80.5"	""	"68.4"	""	"138.9"	""	"130.6"	"111.0"	""	"699"	"23"	"35.000"	"28.000"	"0.18299835258672"	""	"0.005874"	"0.06671"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAATPGQK"	"[R].gAATPGQk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"594.36072"	"1187.71416"	"1187.71484"	"-0.58"	"-0.00034"	"4/58"	"4"	"58"	"897435.204772949"	"HCD"	"MS2"	"42.61924"	"69.6"	"100.000"	"25.0410"	"5191"	"5191"	"5176"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"72.9"	""	"77.4"	""	"84.5"	""	"145.3"	"1.0"	"148.3"	"132.2"	""	"699"	"20"	"35.000"	"28.000"	"0.323182011791409"	"28"	"0.004069"	"0.04424"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDALGAEDR"	"[R].lDALGAEDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"0"	"2"	"2"	"0.5098"	"0.0000"	"1"	"1"	"1"	"594.82422"	"1188.64116"	"1188.64218"	"-0.86"	"-0.00051"	"7/76"	"7"	"76"	"7095317.13311768"	"HCD"	"MS2"	"22.77645"	"289.9"	"100.000"	"56.8218"	"18117"	"18117"	"18099"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"442.6"	""	"388.3"	""	"410.2"	""	"464.2"	""	"521.9"	"523.9"	""	"709"	"51"	"35.000"	"28.000"	"0.00029283045312511"	""	"0"	"0.0004264"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDALGAEDR"	"[R].lDALGAEDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"0"	"2"	"2"	"0.5102"	"0.0000"	"1"	"1"	"1"	"594.82452"	"1188.64177"	"1188.64218"	"-0.35"	"-0.00021"	"8/76"	"8"	"76"	"6608408.32208252"	"HCD"	"MS2"	"26.10931"	"289.7"	"100.000"	"57.0057"	"18178"	"18178"	"18163"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"444.2"	""	"386.2"	""	"394.7"	""	"450.4"	""	"515.6"	"560.0"	""	"702"	"49"	"35.000"	"28.000"	"0.000465915454663138"	""	"0"	"0.0004169"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDALGAEDR"	"[R].lDALGAEDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"594.82483"	"1188.64238"	"1188.64218"	"0.17"	"0.00010"	"7/76"	"7"	"76"	"1436273.52966309"	"HCD"	"MS2"	"38.73214"	"75.5"	"100.000"	"57.1260"	"18241"	"18241"	"18224"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"102.4"	""	"102.4"	""	"105.3"	""	"121.1"	"1.7"	"135.5"	"147.1"	""	"716"	"26"	"35.000"	"28.000"	"0.095473540189869"	""	"0.0002479"	"0.005661"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTVIENLR"	"[K].dTVIENLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"594.84271"	"1188.67815"	"1188.67857"	"-0.35"	"-0.00021"	"6/68"	"6"	"68"	"1653131.36157227"	"HCD"	"MS2"	"12.06322"	"78.7"	"100.000"	"55.8452"	"17719"	"17719"	"17697"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"98.0"	""	"66.5"	""	"84.0"	""	"147.9"	""	"182.7"	"170.8"	""	"844"	"34"	"36.000"	"29.000"	"0.0154636656501386"	""	"0.0003538"	"0.006358"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTVIENLR"	"[K].dTVIENLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.4054"	"0.0000"	"1"	"1"	"1"	"594.84277"	"1188.67827"	"1188.67857"	"-0.25"	"-0.00015"	"6/68"	"6"	"68"	"1606089.90704346"	"HCD"	"MS2"	"9.201237"	"75.9"	"100.000"	"56.0226"	"17777"	"17777"	"17757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"96.2"	""	"67.0"	""	"82.1"	""	"136.1"	"2.9"	"170.3"	"166.9"	""	"844"	"37"	"36.000"	"29.000"	"0.00931777997333975"	""	"0.0001301"	"0.00441"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTDALNATR"	"[R].vTDALNATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7593"	"0.0000"	"1"	"1"	"1"	"595.34009"	"1189.67290"	"1189.67382"	"-0.77"	"-0.00046"	"7/82"	"7"	"82"	"4291328.66906738"	"HCD"	"MS2"	"7.391257"	"196.7"	"100.000"	"47.0410"	"14131"	"14131"	"14110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"295.8"	""	"264.0"	""	"311.5"	""	"308.4"	""	"354.1"	"330.9"	""	"751"	"54"	"35.000"	"28.000"	"0.000164289550486924"	""	"0"	"0.0004569"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVELTATR"	"[K].nGVELTATR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P97546"	"Neuroplastin OS=Rattus norvegicus OX=10116 GN=Nptn PE=1 SV=2"	"P97546"	"Neuroplastin OS=Rattus norvegicus OX=10116 GN=Nptn PE=1 SV=2"	"0"	"2"	"2"	"0.7170"	"0.0000"	"1"	"1"	"1"	"595.34015"	"1189.67302"	"1189.67382"	"-0.67"	"-0.00040"	"7/88"	"7"	"88"	"3303397.72357178"	"HCD"	"MS2"	"0"	"147.7"	"100.000"	"36.3508"	"9788"	"9788"	"9773"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"158.6"	""	"183.8"	""	"197.1"	""	"250.2"	""	"290.6"	"324.4"	""	"751"	"53"	"35.000"	"28.000"	"0.00019706520132379"	""	"0"	"0.0006845"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTDALNATR"	"[R].vTDALNATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"595.34027"	"1189.67327"	"1189.67382"	"-0.46"	"-0.00028"	"7/82"	"7"	"82"	"3119931.30169678"	"HCD"	"MS2"	"2.639807"	"145.6"	"100.000"	"47.2657"	"14211"	"14211"	"14193"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"230.7"	""	"195.9"	""	"210.2"	""	"234.5"	""	"264.5"	"251.1"	""	"751"	"51"	"35.000"	"28.000"	"0.000300337762755139"	"28"	"0"	"0.0004706"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVELTATR"	"[K].nGVELTATR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P97546"	"Neuroplastin OS=Rattus norvegicus OX=10116 GN=Nptn PE=1 SV=2"	"P97546"	"Neuroplastin OS=Rattus norvegicus OX=10116 GN=Nptn PE=1 SV=2"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"595.34039"	"1189.67351"	"1189.67382"	"-0.26"	"-0.00015"	"8/88"	"8"	"88"	"1993745.28051758"	"HCD"	"MS2"	"0"	"120.8"	"100.000"	"36.6634"	"9915"	"9915"	"9891"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"119.8"	""	"143.1"	""	"150.8"	""	"195.7"	""	"272.6"	"267.3"	""	"743"	"29"	"35.000"	"28.000"	"0.0459154471524636"	""	"0.0002479"	"0.005556"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVELTATR"	"[K].nGVELTATR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P97546"	"Neuroplastin OS=Rattus norvegicus OX=10116 GN=Nptn PE=1 SV=2"	"P97546"	"Neuroplastin OS=Rattus norvegicus OX=10116 GN=Nptn PE=1 SV=2"	"0"	"2"	"2"	"0.7255"	"0.0000"	"1"	"1"	"1"	"595.34045"	"1189.67363"	"1189.67382"	"-0.16"	"-0.00009"	"7/88"	"7"	"88"	"3263830.07733154"	"HCD"	"MS2"	"5.904304"	"158.3"	"100.000"	"36.5244"	"9852"	"9852"	"9832"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"168.1"	""	"197.2"	""	"224.6"	""	"265.4"	""	"329.2"	"320.1"	""	"743"	"51"	"35.000"	"28.000"	"0.000314021090977048"	""	"0"	"0.0006128"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTDALNATR"	"[R].vTDALNATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"595.34064"	"1189.67400"	"1189.67382"	"0.15"	"0.00009"	"7/82"	"7"	"82"	"3491212.56152344"	"HCD"	"MS2"	"22.78769"	"201.7"	"100.000"	"47.3517"	"14258"	"14258"	"14238"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"322.2"	""	"252.8"	""	"275.8"	""	"328.4"	""	"364.2"	"367.2"	""	"743"	"39"	"35.000"	"28.000"	"0.00485242484940979"	""	"0"	"0.001175"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTDALNATR"	"[R].vTDALNATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"595.34076"	"1189.67424"	"1189.67382"	"0.36"	"0.00021"	"7/82"	"7"	"82"	"3929987.10205078"	"HCD"	"MS2"	"13.56969"	"212.9"	"100.000"	"47.5809"	"14340"	"14340"	"14321"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"350.6"	""	"284.7"	""	"308.9"	""	"344.1"	""	"363.3"	"363.6"	""	"743"	"40"	"35.000"	"28.000"	"0.00409221853494636"	"26"	"0"	"0.0007228"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGPESDK"	"[R].vGPESDk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.4242"	"0.0000"	"1"	"1"	"1"	"595.34479"	"1189.68230"	"1189.68287"	"-0.48"	"-0.00029"	"5/52"	"5"	"52"	"8530572.23699951"	"HCD"	"MS2"	"2.528317"	"553.9"	"100.000"	"32.6208"	"8278"	"8278"	"8259"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"443.2"	""	"438.4"	""	"400.7"	""	"1308.3"	""	"1569.7"	"1129.7"	""	"791"	"33"	"35.000"	"28.000"	"0.0202836677368585"	""	"0.006308"	"0.07161"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGPESDK"	"[R].vGPESDk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"595.34497"	"1189.68266"	"1189.68287"	"-0.18"	"-0.00010"	"5/52"	"5"	"52"	"7946844.72167969"	"HCD"	"MS2"	"6.857604"	"519.8"	"100.000"	"32.6398"	"8279"	"8279"	"8259"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"429.5"	""	"444.3"	""	"359.8"	""	"1240.0"	""	"1439.7"	"1054.4"	""	"800"	"33"	"36.000"	"29.000"	"0.0213333958195049"	""	"0.004942"	"0.05599"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVQAGDK"	"[K].iVqAGDk.[D]"	"N-Term(TMT6plex); Q3(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q8K3P6"	"Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Rattus norvegicus OX=10116 GN=Slc25a25 PE=1 SV=1"	"Q8K3P6"	"Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Rattus norvegicus OX=10116 GN=Slc25a25 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"595.36310"	"1189.71892"	"1189.71926"	"-0.29"	"-0.00017"	"8/56"	"8"	"56"	"1028803.1706543"	"HCD"	"MS2"	"46.72963"	"84.3"	"100.000"	"46.4300"	"13884"	"13884"	"13862"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"104.7"	""	"103.7"	""	"103.9"	""	"125.1"	""	"178.4"	"186.4"	""	"614"	"12"	"34.000"	"27.000"	"1.81191731612756"	"19"	"0.00736"	"0.08487"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEAELK"	"[K].aAEAELk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2N8"	"Intraflagellar transport protein 56 OS=Rattus norvegicus OX=10116 GN=Ttc26 PE=2 SV=1"	"Q5U2N8"	"Intraflagellar transport protein 56 OS=Rattus norvegicus OX=10116 GN=Ttc26 PE=2 SV=1"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"595.36322"	"1189.71916"	"1189.71926"	"-0.08"	"-0.00005"	"6/52"	"6"	"52"	"813233.433654785"	"HCD"	"MS2"	"0"	"72.7"	"100.000"	"41.1094"	"11721"	"11721"	"11693"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"114.5"	""	"89.6"	""	"101.9"	""	"106.6"	"2.4"	"142.2"	"131.3"	""	"616"	"29"	"34.000"	"27.000"	"0.0361868446921375"	""	"0.003111"	"0.03172"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTNPNFVR"	"[R].nTNPNFVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLT0"	"Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"Q9JLT0"	"Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"595.82727"	"1190.64726"	"1190.64794"	"-0.56"	"-0.00034"	"5/70"	"5"	"70"	"6879241.7220459"	"HCD"	"MS2"	"10.11167"	"349.2"	"100.000"	"32.9706"	"8414"	"8414"	"8401"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"393.7"	""	"476.5"	""	"479.6"	""	"647.6"	""	"671.2"	"646.2"	""	"805"	"33"	"36.000"	"29.000"	"0.0213680988802973"	"24"	"0.004022"	"0.04365"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTNPNFVR"	"[R].nTNPNFVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLT0"	"Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"Q9JLT0"	"Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"595.82739"	"1190.64751"	"1190.64794"	"-0.36"	"-0.00021"	"5/70"	"5"	"70"	"7890718.47869873"	"HCD"	"MS2"	"12.36374"	"385.6"	"100.000"	"32.9612"	"8416"	"8416"	"8395"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"447.1"	""	"513.3"	""	"550.1"	""	"729.4"	""	"727.3"	"690.2"	""	"801"	"37"	"36.000"	"29.000"	"0.00744050684264224"	"21"	"0.003111"	"0.03077"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVELTATR"	"[K].nGVELTATR.[K]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P97546"	"Neuroplastin OS=Rattus norvegicus OX=10116 GN=Nptn PE=1 SV=2"	"P97546"	"Neuroplastin OS=Rattus norvegicus OX=10116 GN=Nptn PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"595.83136"	"1190.65544"	"1190.65783"	"-2.01"	"-0.00119"	"7/88"	"7"	"88"	"1776975.60992432"	"HCD"	"MS2"	"32.62098"	"130.9"	"100.000"	"40.9214"	"11645"	"11645"	"11625"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"285.4"	""	"178.0"	""	"179.9"	""	"180.2"	"1.6"	"196.4"	"214.1"	""	"863"	"22"	"36.000"	"29.000"	"0.276045581510762"	"14"	"0.001978"	"0.02206"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVELTATR"	"[K].nGVELTATR.[K]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P97546"	"Neuroplastin OS=Rattus norvegicus OX=10116 GN=Nptn PE=1 SV=2"	"P97546"	"Neuroplastin OS=Rattus norvegicus OX=10116 GN=Nptn PE=1 SV=2"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"595.83221"	"1190.65715"	"1190.65783"	"-0.57"	"-0.00034"	"6/88"	"6"	"88"	"2158021.22460938"	"HCD"	"MS2"	"13.07343"	"108.7"	"100.000"	"42.6979"	"12369"	"12369"	"12346"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.7"	""	"111.1"	""	"115.7"	""	"203.0"	""	"238.0"	"254.0"	""	"829"	"38"	"36.000"	"29.000"	"0.0065997051736271"	"28"	"0"	"0.0006731"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAVDSVVR"	"[R].tDAVDSVVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5102"	"0.0000"	"1"	"1"	"1"	"595.83221"	"1190.65715"	"1190.65783"	"-0.57"	"-0.00034"	"7/74"	"7"	"74"	"6431086.83288574"	"HCD"	"MS2"	"12.5014"	"301.6"	"100.000"	"45.2038"	"13384"	"13384"	"13367"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"370.5"	""	"315.4"	""	"320.8"	""	"555.6"	""	"645.9"	"663.0"	""	"829"	"49"	"36.000"	"29.000"	"0.000530303550573294"	""	"0"	"0.0003708"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVELTATR"	"[K].nGVELTATR.[K]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P97546"	"Neuroplastin OS=Rattus norvegicus OX=10116 GN=Nptn PE=1 SV=2"	"P97546"	"Neuroplastin OS=Rattus norvegicus OX=10116 GN=Nptn PE=1 SV=2"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"595.83228"	"1190.65727"	"1190.65783"	"-0.47"	"-0.00028"	"7/88"	"7"	"88"	"2017558.81713867"	"HCD"	"MS2"	"6.161162"	"102.0"	"100.000"	"42.7856"	"12394"	"12394"	"12370"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"119.7"	""	"101.9"	""	"111.3"	""	"184.3"	""	"224.9"	"228.1"	""	"829"	"39"	"36.000"	"29.000"	"0.00530303550573294"	"29"	"0"	"0.00112"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSEVGSVR"	"[K].dLSEVGSVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"595.83234"	"1190.65740"	"1190.65783"	"-0.37"	"-0.00022"	"7/76"	"7"	"76"	"1905797.72515869"	"HCD"	"MS2"	"8.206036"	"112.1"	"100.000"	"49.1871"	"15006"	"15006"	"14988"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"167.4"	""	"140.7"	""	"154.2"	""	"163.8"	""	"209.0"	"228.5"	""	"831"	"41"	"36.000"	"29.000"	"0.00308014405260532"	"26"	"0"	"0.0007979"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAVDSVVR"	"[R].tDAVDSVVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.4902"	"0.0000"	"1"	"1"	"1"	"595.83234"	"1190.65740"	"1190.65783"	"-0.37"	"-0.00022"	"7/74"	"7"	"74"	"5536210.8581543"	"HCD"	"MS2"	"15.23269"	"253.9"	"100.000"	"45.3191"	"13420"	"13420"	"13403"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"336.9"	""	"263.7"	""	"278.6"	""	"454.1"	""	"545.0"	"536.8"	""	"831"	"51"	"36.000"	"29.000"	"0.000339289975299495"	""	"0"	"0.000549"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSEVGSVR"	"[K].dLSEVGSVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"595.83240"	"1190.65752"	"1190.65783"	"-0.26"	"-0.00016"	"7/76"	"7"	"76"	"2127446.68328857"	"HCD"	"MS2"	"3.897028"	"110.1"	"100.000"	"49.2435"	"15017"	"15017"	"14998"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"174.7"	""	"163.2"	""	"151.9"	""	"148.5"	""	"191.6"	"213.0"	""	"839"	"50"	"36.000"	"29.000"	"0.000379954826076795"	"27"	"0"	"0.0004366"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSEVGSVR"	"[K].dLSEVGSVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"595.83252"	"1190.65776"	"1190.65783"	"-0.06"	"-0.00003"	"7/76"	"7"	"76"	"1989976.63934326"	"HCD"	"MS2"	"5.375298"	"111.2"	"100.000"	"49.5448"	"15140"	"15140"	"15121"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"173.1"	""	"146.6"	""	"157.0"	""	"159.5"	""	"186.3"	"232.8"	""	"839"	"50"	"36.000"	"29.000"	"0.000409951014190963"	"26"	"0"	"0.0003812"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAVDSVVR"	"[R].tDAVDSVVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"595.83252"	"1190.65776"	"1190.65783"	"-0.06"	"-0.00003"	"8/74"	"8"	"74"	"3233295.12634277"	"HCD"	"MS2"	"2.226242"	"158.4"	"100.000"	"45.5994"	"13533"	"13533"	"13517"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"219.4"	""	"172.0"	""	"191.2"	""	"259.6"	""	"334.5"	"331.2"	""	"839"	"28"	"36.000"	"29.000"	"0.0697801606830287"	""	"0.0004639"	"0.007991"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSEVGSVR"	"[K].dLSEVGSVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"595.83264"	"1190.65801"	"1190.65783"	"0.15"	"0.00009"	"7/76"	"7"	"76"	"2948687.63812256"	"HCD"	"MS2"	"6.486829"	"140.3"	"100.000"	"48.8856"	"14884"	"14884"	"14863"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"216.3"	""	"195.7"	""	"192.2"	""	"203.4"	"1.2"	"244.0"	"275.6"	""	"838"	"53"	"36.000"	"29.000"	"0.000203804619184722"	"25"	"0"	"0.0002036"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGADAAAK"	"[R].eGADAAAk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"595.84192"	"1190.67656"	"1190.67812"	"-1.31"	"-0.00078"	"12/62"	"12"	"62"	"3208011.9899292"	"HCD"	"MS2"	"0"	"272.5"	"100.000"	"26.1057"	"5638"	"5638"	"5622"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"381.3"	""	"289.3"	""	"314.8"	""	"522.9"	""	"546.8"	"533.8"	""	"848"	"43"	"36.000"	"29.000"	"0.00224060786752676"	"27"	"0.0003538"	"0.00644"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGADAAAK"	"[R].eGADAAAk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"595.84271"	"1190.67815"	"1190.67812"	"0.02"	"0.00001"	"7/62"	"7"	"62"	"3623239.09130859"	"HCD"	"MS2"	"9.091746"	"305.7"	"100.000"	"26.2253"	"5670"	"5670"	"5657"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"381.6"	""	"355.3"	""	"369.7"	""	"575.1"	""	"622.6"	"600.8"	""	"870"	"34"	"36.000"	"29.000"	"0.0181338181809596"	"24"	"0.0006732"	"0.009018"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAATGAVK"	"[K].dAATGAVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"595.86029"	"1190.71330"	"1190.71451"	"-1.01"	"-0.00060"	"7/62"	"7"	"62"	"4694572.3850708"	"HCD"	"MS2"	"0"	"328.1"	"100.000"	"31.9119"	"7982"	"7982"	"7961"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"526.3"	"2.6"	"433.3"	""	"439.4"	""	"487.3"	"0.8"	"547.4"	"670.1"	""	"484"	"47"	"33.000"	"26.000"	"0.000431335661722437"	""	"0"	"0.002789"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVAADSK"	"[R].aAVAADSk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QWE9"	"Glutathione hydrolase 5 proenzyme OS=Rattus norvegicus OX=10116 GN=Ggt5 PE=2 SV=1"	"Q9QWE9"	"Glutathione hydrolase 5 proenzyme OS=Rattus norvegicus OX=10116 GN=Ggt5 PE=2 SV=1"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"595.86066"	"1190.71404"	"1190.71451"	"-0.40"	"-0.00024"	"6/58"	"6"	"58"	"838961.19128418"	"HCD"	"MS2"	"16.53917"	"67.2"	"100.000"	"31.1602"	"7675"	"7675"	"7647"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"84.1"	""	"84.4"	""	"93.8"	""	"107.2"	""	"141.1"	"131.7"	""	"484"	"23"	"33.000"	"26.000"	"0.119348060557094"	"25"	"0.0002479"	"0.005354"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAATGAVK"	"[K].dAATGAVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"595.86066"	"1190.71404"	"1190.71451"	"-0.40"	"-0.00024"	"11/62"	"11"	"62"	"5054407.90441895"	"HCD"	"MS2"	"0"	"351.3"	"100.000"	"31.8448"	"7964"	"7964"	"7941"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"560.4"	""	"477.9"	""	"476.1"	""	"516.2"	""	"570.0"	"726.3"	""	"484"	"38"	"33.000"	"26.000"	"0.00383544152575589"	"24"	"0.0001301"	"0.00471"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVAADSK"	"[R].aAVAADSk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QWE9"	"Glutathione hydrolase 5 proenzyme OS=Rattus norvegicus OX=10116 GN=Ggt5 PE=2 SV=1"	"Q9QWE9"	"Glutathione hydrolase 5 proenzyme OS=Rattus norvegicus OX=10116 GN=Ggt5 PE=2 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"595.86072"	"1190.71416"	"1190.71451"	"-0.29"	"-0.00017"	"7/58"	"7"	"58"	"937488.350219727"	"HCD"	"MS2"	"24.12956"	"72.1"	"100.000"	"31.0932"	"7658"	"7658"	"7634"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"111.0"	""	"85.8"	""	"105.0"	""	"100.0"	""	"144.9"	"136.6"	""	"490"	"36"	"33.000"	"26.000"	"0.00651877639650709"	""	"0"	"0.001857"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANGMELDGR"	"[R].aNGMELDGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62997"	"Transformer-2 protein homolog beta OS=Rattus norvegicus OX=10116 GN=Tra2b PE=1 SV=1"	"P62997"	"Transformer-2 protein homolog beta OS=Rattus norvegicus OX=10116 GN=Tra2b PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"596.30145"	"1191.59563"	"1191.59894"	"-2.78"	"-0.00165"	"7/82"	"7"	"82"	"1622395.42218018"	"HCD"	"MS2"	"23.68906"	"108.0"	"100.000"	"37.4464"	"10232"	"10232"	"10220"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"137.6"	""	"119.3"	""	"103.0"	""	"152.4"	""	"250.0"	"269.2"	""	"490"	"39"	"33.000"	"26.000"	"0.00296596542719868"	"21"	"0"	"0.0006689"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINNPDMR"	"[K].sINNPDmR.[V]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"596.30170"	"1191.59612"	"1191.59894"	"-2.37"	"-0.00141"	"5/76"	"5"	"76"	"1639912.77252197"	"HCD"	"MS2"	"0"	"77.5"	"100.000"	"24.6118"	"5034"	"5034"	"5018"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"107.9"	""	"80.6"	""	"94.5"	""	"170.3"	""	"136.3"	"150.2"	""	"488"	"31"	"33.000"	"26.000"	"0.0174738992091948"	"18"	"0.003922"	"0.04056"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANGMELDGR"	"[R].aNGMELDGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62997"	"Transformer-2 protein homolog beta OS=Rattus norvegicus OX=10116 GN=Tra2b PE=1 SV=1"	"P62997"	"Transformer-2 protein homolog beta OS=Rattus norvegicus OX=10116 GN=Tra2b PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"596.30280"	"1191.59831"	"1191.59894"	"-0.52"	"-0.00031"	"7/82"	"7"	"82"	"1478320.87774658"	"HCD"	"MS2"	"28.53193"	"101.8"	"100.000"	"37.6428"	"10305"	"10305"	"10291"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"133.9"	""	"106.0"	""	"82.7"	""	"145.6"	""	"245.1"	"259.6"	""	"497"	"34"	"33.000"	"26.000"	"0.0104791581102003"	"20"	"0"	"0.0004952"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DSGVGASLTR"	"[R].dSGVGASLTR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63744"	"Rho GTPase-activating protein 7 OS=Rattus norvegicus OX=10116 GN=Dlc1 PE=1 SV=3"	"Q63744"	"Rho GTPase-activating protein 7 OS=Rattus norvegicus OX=10116 GN=Dlc1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"596.33704"	"1191.66680"	"1191.65308"	"11.51"	"0.00686"	"6/88"	"6"	"88"	"3053268.41870117"	"HCD"	"MS2"	"49.19633"	"228.4"	"100.000"	"35.6096"	"9487"	"9487"	"9465"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"319.3"	""	"252.2"	""	"268.9"	""	"400.9"	""	"454.2"	"477.8"	""	"762"	"8"	"35.000"	"28.000"	"5.87387872573782"	"20"	"0.005427"	"0.06252"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDTAAK"	"[R].dIDTAAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"Q71S46"	"ATP synthase F(0) complex subunit C3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc3 PE=2 SV=1"	"Q71S46; Q06645; Q06646"	"ATP synthase F(0) complex subunit C3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc3 PE=2 SV=1; ATP synthase F(0) complex subunit C1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc1 PE=1 SV=1; ATP synthase F(0) complex subunit C2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc2 PE=2 SV=1"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"596.35187"	"1191.69646"	"1191.69852"	"-1.73"	"-0.00103"	"12/54"	"12"	"54"	"5457427.80004883"	"HCD"	"MS2"	"0"	"404.1"	"100.000"	"39.5145"	"11072"	"11072"	"11052"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"527.6"	""	"453.1"	""	"440.2"	""	"831.4"	"1.5"	"784.2"	"796.1"	""	"639"	"40"	"35.000"	"28.000"	"0.00294083638175138"	""	"0.002871"	"0.02703"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDTAAK"	"[R].dIDTAAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"Q71S46"	"ATP synthase F(0) complex subunit C3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc3 PE=2 SV=1"	"Q71S46; Q06645; Q06646"	"ATP synthase F(0) complex subunit C3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc3 PE=2 SV=1; ATP synthase F(0) complex subunit C1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc1 PE=1 SV=1; ATP synthase F(0) complex subunit C2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc2 PE=2 SV=1"	"0"	"2"	"2"	"0.3421"	"0.0000"	"1"	"1"	"1"	"596.35236"	"1191.69744"	"1191.69852"	"-0.91"	"-0.00054"	"12/54"	"12"	"54"	"10594807.8747559"	"HCD"	"MS2"	"0"	"649.0"	"84.186"	"40.0304"	"11274"	"11274"	"11257"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"744.8"	""	"652.7"	""	"718.4"	""	"1235.2"	""	"1391.2"	"1433.8"	""	"617"	"38"	"34.000"	"27.000"	"0.00480015397350165"	""	"0.003449"	"0.03416"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELSEGK"	"[R].aELSEGk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.1333"	"0.0000"	"1"	"1"	"1"	"596.35254"	"1191.69780"	"1191.69852"	"-0.61"	"-0.00036"	"6/54"	"6"	"54"	"958580.846740723"	"HCD"	"MS2"	"34.75355"	"78.0"	"100.000"	"38.4912"	"10655"	"10655"	"10629"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.6"	""	"86.7"	""	"93.4"	""	"153.6"	"0.4"	"146.7"	"164.2"	""	"617"	"15"	"34.000"	"27.000"	"0.887677410945953"	"27"	"0.005921"	"0.0682"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDTAAK"	"[R].dIDTAAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"Q71S46"	"ATP synthase F(0) complex subunit C3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc3 PE=2 SV=1"	"Q71S46; Q06645; Q06646"	"ATP synthase F(0) complex subunit C3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc3 PE=2 SV=1; ATP synthase F(0) complex subunit C1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc1 PE=1 SV=1; ATP synthase F(0) complex subunit C2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc2 PE=2 SV=1"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"596.35266"	"1191.69805"	"1191.69852"	"-0.40"	"-0.00024"	"12/54"	"12"	"54"	"13810450.4534302"	"HCD"	"MS2"	"0"	"767.3"	"77.370"	"39.8041"	"11190"	"11190"	"11172"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"909.4"	""	"748.8"	""	"867.1"	""	"1418.6"	""	"1617.0"	"1741.3"	""	"617"	"40"	"34.000"	"27.000"	"0.00299402324895233"	""	"0.003111"	"0.03148"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDTAAK"	"[R].dIDTAAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"Q71S46"	"ATP synthase F(0) complex subunit C3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc3 PE=2 SV=1"	"Q71S46; Q06645; Q06646"	"ATP synthase F(0) complex subunit C3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc3 PE=2 SV=1; ATP synthase F(0) complex subunit C1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc1 PE=1 SV=1; ATP synthase F(0) complex subunit C2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc2 PE=2 SV=1"	"0"	"2"	"2"	"0.3421"	"0.0000"	"1"	"1"	"1"	"596.35272"	"1191.69817"	"1191.69852"	"-0.30"	"-0.00018"	"12/54"	"12"	"54"	"7137790.93078613"	"HCD"	"MS2"	"0"	"527.1"	"100.000"	"39.7363"	"11153"	"11153"	"11133"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"712.6"	""	"574.0"	""	"556.4"	""	"1097.3"	""	"1042.3"	"1024.3"	""	"617"	"38"	"34.000"	"27.000"	"0.00451081658319897"	""	"0.002973"	"0.02967"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELSEGK"	"[R].aELSEGk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"596.35284"	"1191.69841"	"1191.69852"	"-0.09"	"-0.00006"	"6/54"	"6"	"54"	"6587089.79034424"	"HCD"	"MS2"	"18.17314"	"402.1"	"100.000"	"37.9904"	"10450"	"10450"	"10430"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"505.8"	""	"450.1"	""	"478.7"	""	"766.7"	""	"758.4"	"856.4"	""	"616"	"25"	"34.000"	"27.000"	"0.109031181053698"	""	"0.005617"	"0.06435"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVSDIK"	"[K].nGVSDIk.[T]"	"N-Term(TMT6plex); N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.1905"	"0.0000"	"1"	"1"	"1"	"596.35291"	"1191.69853"	"1191.69852"	"0.01"	"0.00000"	"5/62"	"5"	"62"	"2502626.10638428"	"HCD"	"MS2"	"1.927655"	"192.9"	"100.000"	"46.2765"	"13809"	"13809"	"13789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"263.3"	""	"189.8"	""	"212.8"	""	"342.9"	""	"420.7"	"407.8"	""	"616"	"21"	"34.000"	"27.000"	"0.222613099509468"	""	"0.005254"	"0.05946"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELSEGK"	"[R].aELSEGk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"596.35339"	"1191.69951"	"1191.69852"	"0.83"	"0.00049"	"6/54"	"6"	"54"	"5326619.74682617"	"HCD"	"MS2"	"8.892823"	"362.9"	"100.000"	"38.1794"	"10519"	"10519"	"10501"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"442.9"	""	"423.2"	""	"443.2"	""	"663.3"	""	"700.2"	"776.3"	""	"615"	"30"	"34.000"	"27.000"	"0.0319775450992436"	""	"0.004606"	"0.04963"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVSDIK"	"[K].nGVSDIk.[T]"	"N-Term(TMT6plex); N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.2632"	"0.0000"	"1"	"1"	"1"	"596.35345"	"1191.69963"	"1191.69852"	"0.93"	"0.00055"	"6/62"	"6"	"62"	"2619381.38873291"	"HCD"	"MS2"	"4.90402"	"195.6"	"100.000"	"46.1174"	"13756"	"13756"	"13737"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"246.7"	""	"206.7"	""	"200.2"	""	"371.1"	""	"416.5"	"417.5"	""	"611"	"19"	"34.000"	"27.000"	"0.411160338164092"	""	"0.007413"	"0.08905"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDTGEPMGR"	"[R].tDTGEPMGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"596.79449"	"1192.58171"	"1192.58295"	"-1.04"	"-0.00062"	"7/72"	"7"	"72"	"1960811.69134521"	"HCD"	"MS2"	"0"	"97.2"	"100.000"	"25.9663"	"5567"	"5567"	"5545"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"189.5"	""	"133.8"	""	"152.4"	""	"113.8"	"0.9"	"154.3"	"173.7"	""	"398"	"39"	"32.000"	"25.000"	"0.00225347672283876"	"25"	"0"	"0.0003319"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDTGEPMGR"	"[R].tDTGEPMGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"596.79462"	"1192.58196"	"1192.58295"	"-0.84"	"-0.00050"	"6/72"	"6"	"72"	"1870415.06158447"	"HCD"	"MS2"	"0"	"89.0"	"100.000"	"25.8673"	"5542"	"5542"	"5512"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"165.6"	""	"126.0"	""	"143.0"	""	"122.8"	"1.3"	"145.2"	"137.1"	""	"398"	"35"	"32.000"	"25.000"	"0.006336553068235"	"25"	"0"	"0.0006894"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMETLQR"	"[K].aDMETLQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"596.81293"	"1192.61858"	"1192.61934"	"-0.64"	"-0.00038"	"6/64"	"6"	"64"	"1393497.5368042"	"HCD"	"MS2"	"21.29788"	"110.4"	"100.000"	"41.0576"	"11691"	"11691"	"11670"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"190.9"	""	"142.8"	""	"141.0"	""	"164.9"	""	"223.4"	"189.6"	""	"589"	"12"	"34.000"	"27.000"	"1.87968596683117"	"18"	"0.008641"	"0.1069"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SANTQSISR"	"[K].sANTQSISR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"596.82733"	"1192.64739"	"1192.64833"	"-0.79"	"-0.00047"	"8/90"	"8"	"90"	"2234211.69329834"	"HCD"	"MS2"	"31.88087"	"164.9"	"100.000"	"22.0479"	"4000"	"4000"	"3971"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"271.2"	""	"187.9"	""	"180.2"	""	"281.4"	""	"351.5"	"294.7"	""	"711"	"22"	"35.000"	"28.000"	"0.222761228891015"	"26"	"0"	"0.00185"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SANTQSISR"	"[K].sANTQSISR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"596.82843"	"1192.64958"	"1192.64833"	"1.05"	"0.00063"	"8/90"	"8"	"90"	"2240775.00134277"	"HCD"	"MS2"	"15.75363"	"166.7"	"100.000"	"22.0756"	"3994"	"3994"	"3969"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"269.7"	""	"202.6"	""	"183.0"	""	"271.1"	""	"366.1"	"300.0"	""	"693"	"28"	"35.000"	"28.000"	"0.0534199206947022"	"25"	"0"	"0.001311"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAATLMTER"	"[R].aAATLMTER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.83118"	"1192.65508"	"1192.65572"	"-0.54"	"-0.00032"	"7/72"	"7"	"72"	"3742671.96374512"	"HCD"	"MS2"	"22.18874"	"173.1"	"100.000"	"44.6949"	"13176"	"13176"	"13157"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"281.2"	""	"247.4"	""	"192.8"	""	"225.1"	"0.8"	"355.3"	"339.1"	""	"706"	"38"	"35.000"	"28.000"	"0.00583142514774842"	"15"	"0"	"0.0008055"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAATLMTER"	"[R].aAATLMTER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"596.83154"	"1192.65581"	"1192.65572"	"0.07"	"0.00004"	"7/72"	"7"	"72"	"3934983.49945068"	"HCD"	"MS2"	"20.69229"	"176.8"	"100.000"	"44.8356"	"13222"	"13222"	"13200"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"276.0"	""	"246.4"	""	"200.8"	""	"240.7"	""	"352.9"	"360.6"	""	"715"	"38"	"35.000"	"28.000"	"0.00570526795137132"	"17"	"0"	"0.0008151"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILPEAHQR"	"[R].iLPEAHQR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"3"	"3"	"0.5789"	"0.0000"	"1"	"1"	"1"	"398.23889"	"1192.70212"	"1192.69997"	"1.80"	"0.00072"	"9/58"	"9"	"58"	"4135241.1940918"	"HCD"	"MS2"	"41.97645"	"170.8"	"100.000"	"30.5447"	"7439"	"7439"	"7410"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"251.9"	""	"246.5"	""	"267.5"	""	"205.7"	""	"299.4"	"349.3"	""	"573"	"19"	"34.000"	"27.000"	"0.350045602637236"	"22"	"0.003111"	"0.03074"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILPEAHQR"	"[R].iLPEAHQR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"398.23895"	"1192.70230"	"1192.69997"	"1.96"	"0.00078"	"9/58"	"9"	"58"	"2250446.09338379"	"HCD"	"MS2"	"57.62204"	"108.1"	"100.000"	"30.6482"	"7469"	"7469"	"7450"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"160.8"	""	"144.6"	""	"166.9"	""	"133.5"	""	"192.2"	"228.8"	""	"573"	"19"	"34.000"	"27.000"	"0.325180598690119"	"19"	"0.0023"	"0.02406"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMASGVNTR"	"[K].eMASGVNTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"0"	"2"	"2"	"0.5870"	"0.0000"	"1"	"1"	"1"	"597.31042"	"1193.61357"	"1193.61459"	"-0.85"	"-0.00051"	"6/82"	"6"	"82"	"574381.176940918"	"HCD"	"MS2"	"16.31273"	"41.1"	"100.000"	"26.8814"	"5953"	"5953"	"5926"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"62.3"	""	"52.4"	""	"56.9"	""	"57.3"	""	"84.2"	"79.1"	""	"600"	"46"	"34.000"	"27.000"	"0.000824368245930719"	""	"0"	"0.001439"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMASGVNTR"	"[K].eMASGVNTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"597.31067"	"1193.61406"	"1193.61459"	"-0.44"	"-0.00026"	"6/82"	"6"	"82"	"463564.963439941"	"HCD"	"MS2"	"0"	"37.9"	"100.000"	"26.9851"	"5979"	"5979"	"5952"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.0"	""	"57.5"	""	"49.0"	""	"58.3"	""	"70.9"	"71.6"	""	"600"	"40"	"34.000"	"27.000"	"0.00280621702244266"	""	"0"	"0.003321"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEELAAR"	"[R].fEEELAAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"597.32098"	"1193.63469"	"1193.63637"	"-1.41"	"-0.00084"	"9/60"	"9"	"60"	"726759.880432129"	"HCD"	"MS2"	"19.94974"	"48.6"	"100.000"	"58.3509"	"18726"	"18726"	"18703"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.4"	""	"57.1"	""	"69.4"	""	"76.6"	"1.8"	"100.9"	"89.5"	""	"716"	"25"	"35.000"	"28.000"	"0.114784441817296"	"24"	"0.0003538"	"0.006291"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEELAAR"	"[R].fEEELAAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"597.32129"	"1193.63530"	"1193.63637"	"-0.89"	"-0.00053"	"6/60"	"6"	"60"	"772775.347717285"	"HCD"	"MS2"	"40.91607"	"52.5"	"100.000"	"58.1578"	"18662"	"18662"	"18639"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.8"	""	"56.7"	""	"64.0"	""	"87.2"	""	"105.1"	"113.9"	""	"729"	"33"	"35.000"	"28.000"	"0.0164322688805362"	"27"	"0.0002479"	"0.005268"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEELAAR"	"[R].fEEELAAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"597.32153"	"1193.63579"	"1193.63637"	"-0.48"	"-0.00029"	"11/60"	"11"	"60"	"1050092.54040527"	"HCD"	"MS2"	"42.73896"	"49.9"	"100.000"	"58.6593"	"18852"	"18852"	"18824"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.4"	""	"57.2"	""	"63.9"	""	"70.5"	""	"120.6"	"105.2"	""	"729"	"23"	"35.000"	"28.000"	"0.18780084095005"	"23"	"0.001546"	"0.01891"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].DGGGDVAFVk.[H]"	"K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"597.32208"	"1193.63689"	"1193.63637"	"0.44"	"0.00026"	"6/80"	"6"	"80"	"1113275.57061768"	"HCD"	"MS2"	"23.09244"	"62.3"	"100.000"	"55.4283"	"17549"	"17549"	"17527"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"84.2"	""	"72.6"	""	"76.4"	""	"104.2"	"0.6"	"126.7"	"127.1"	""	"737"	"29"	"35.000"	"28.000"	"0.0495949540469617"	"24"	"0.004069"	"0.0443"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].DGGGDVAFVk.[H]"	"K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"597.32233"	"1193.63738"	"1193.63637"	"0.84"	"0.00050"	"6/80"	"6"	"80"	"1181844.15325928"	"HCD"	"MS2"	"34.09797"	"67.2"	"100.000"	"55.6425"	"17622"	"17622"	"17602"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.2"	""	"71.0"	""	"90.4"	""	"115.9"	"0.5"	"128.6"	"144.9"	""	"736"	"30"	"35.000"	"28.000"	"0.0379182092322514"	"24"	"0.005874"	"0.06618"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEMGK"	"[K].eAAEMGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"597.33319"	"1193.65911"	"1193.66003"	"-0.77"	"-0.00046"	"6/54"	"6"	"54"	"6422993.09588623"	"HCD"	"MS2"	"11.38127"	"525.7"	"100.000"	"34.5064"	"9040"	"9040"	"9015"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1071.5"	""	"819.2"	""	"766.6"	""	"556.2"	""	"903.1"	"852.4"	""	"687"	"26"	"35.000"	"28.000"	"0.0939564807486356"	"20"	"0.005369"	"0.06056"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEMGK"	"[K].eAAEMGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"597.33337"	"1193.65947"	"1193.66003"	"-0.47"	"-0.00028"	"6/54"	"6"	"54"	"41818140.3771973"	"HCD"	"MS2"	"0"	"639.4"	"20.984"	"34.8851"	"9188"	"9188"	"9173"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1166.5"	""	"976.8"	""	"1043.2"	""	"566.7"	""	"1145.7"	"1158.5"	""	"688"	"27"	"35.000"	"28.000"	"0.0728716230525484"	"21"	"0.008478"	"0.1034"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEMGK"	"[K].eAAEMGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"597.33344"	"1193.65959"	"1193.66003"	"-0.37"	"-0.00022"	"6/54"	"6"	"54"	"56946020.9006348"	"HCD"	"MS2"	"0"	"792.8"	"18.923"	"34.7665"	"9145"	"9145"	"9137"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1487.2"	""	"1190.9"	""	"1299.4"	""	"730.4"	""	"1393.1"	"1402.6"	""	"688"	"28"	"35.000"	"28.000"	"0.0576180349353094"	"22"	"0.00736"	"0.08666"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEMGK"	"[K].eAAEMGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"597.33356"	"1193.65984"	"1193.66003"	"-0.16"	"-0.00010"	"6/54"	"6"	"54"	"2283669.78039551"	"HCD"	"MS2"	"5.699581"	"191.3"	"100.000"	"35.1792"	"9307"	"9307"	"9285"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"359.6"	""	"270.7"	""	"278.8"	""	"205.4"	""	"336.0"	"361.0"	""	"694"	"27"	"35.000"	"28.000"	"0.0738464248956002"	"22"	"0.003967"	"0.04157"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEMGK"	"[K].eAAEMGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"597.33356"	"1193.65984"	"1193.66003"	"-0.16"	"-0.00010"	"10/54"	"10"	"54"	"3001909.40820313"	"HCD"	"MS2"	"3.206001"	"243.1"	"100.000"	"35.0534"	"9261"	"9261"	"9242"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"421.6"	""	"344.0"	""	"365.6"	""	"260.7"	""	"428.4"	"485.0"	""	"694"	"28"	"35.000"	"28.000"	"0.0525205753207365"	"22"	"0.004867"	"0.05181"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEMGK"	"[K].eAAEMGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"597.33362"	"1193.65996"	"1193.66003"	"-0.06"	"-0.00004"	"6/54"	"6"	"54"	"8225243.83526611"	"HCD"	"MS2"	"13.84092"	"648.0"	"100.000"	"34.5952"	"9070"	"9070"	"9044"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1300.1"	""	"1004.7"	""	"982.2"	""	"645.2"	""	"1103.3"	"1092.8"	""	"694"	"28"	"35.000"	"28.000"	"0.0598865748520601"	"21"	"0.004942"	"0.0539"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTTPYVR"	"[K].eVTTPYVR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"597.33942"	"1193.67156"	"1193.67275"	"-1.00"	"-0.00060"	"5/62"	"5"	"62"	"1442543.47589111"	"HCD"	"MS2"	"0"	"70.0"	"100.000"	"54.8762"	"17324"	"17324"	"17300"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"72.4"	""	"42.7"	""	"92.9"	""	"127.2"	""	"150.5"	"182.1"	""	"635"	"16"	"35.000"	"28.000"	"0.770448705188667"	"19"	"0.008668"	"0.1095"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTTPYVR"	"[K].eVTTPYVR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"597.33972"	"1193.67217"	"1193.67275"	"-0.49"	"-0.00029"	"6/62"	"6"	"62"	"1297744.29248047"	"HCD"	"MS2"	"17.9566"	"78.6"	"100.000"	"44.6859"	"13161"	"13161"	"13139"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"109.9"	""	"122.9"	""	"97.8"	""	"121.0"	""	"151.2"	"147.4"	""	"635"	"19"	"35.000"	"28.000"	"0.433255145866984"	"19"	"0.00447"	"0.04753"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTTPYVR"	"[K].eVTTPYVR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"597.33984"	"1193.67241"	"1193.67275"	"-0.29"	"-0.00017"	"7/62"	"7"	"62"	"12893253.9120483"	"HCD"	"MS2"	"1.100335"	"411.8"	"76.734"	"44.3703"	"13034"	"13034"	"13017"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"467.9"	""	"524.4"	""	"497.0"	""	"663.1"	""	"879.7"	"883.4"	""	"633"	"27"	"35.000"	"28.000"	"0.0632956281738764"	"28"	"0.0008629"	"0.01101"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTTPYVR"	"[K].eVTTPYVR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"597.33990"	"1193.67253"	"1193.67275"	"-0.19"	"-0.00011"	"7/62"	"7"	"62"	"14446942.1083984"	"HCD"	"MS2"	"1.649534"	"534.9"	"85.892"	"44.2253"	"12990"	"12990"	"12976"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"605.7"	""	"666.1"	""	"656.8"	""	"866.3"	""	"1147.5"	"1140.4"	""	"634"	"29"	"35.000"	"28.000"	"0.0377623716544678"	"26"	"0.000936"	"0.01289"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTTPYVR"	"[K].eVTTPYVR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"597.34009"	"1193.67290"	"1193.67275"	"0.12"	"0.00007"	"6/62"	"6"	"62"	"1442705.20007324"	"HCD"	"MS2"	"22.03994"	"80.5"	"100.000"	"44.5508"	"13118"	"13118"	"13096"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"114.7"	""	"125.3"	""	"87.2"	""	"123.7"	""	"159.5"	"158.5"	""	"646"	"18"	"35.000"	"28.000"	"0.482172594294015"	"18"	"0.001812"	"0.02031"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTTPYVR"	"[K].eVTTPYVR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"597.34186"	"1193.67644"	"1193.67275"	"3.09"	"0.00184"	"6/62"	"6"	"62"	"2941710.03753662"	"HCD"	"MS2"	"24.71972"	"145.5"	"100.000"	"43.9423"	"12874"	"12874"	"12853"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"167.8"	""	"174.9"	""	"182.8"	""	"247.0"	""	"309.4"	"300.6"	""	"613"	"23"	"34.000"	"27.000"	"0.138493846950914"	"27"	"0.005617"	"0.06446"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTTPYVR"	"[K].eVTTPYVR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"597.34253"	"1193.67778"	"1193.67275"	"4.21"	"0.00251"	"7/62"	"7"	"62"	"3208061.83648682"	"HCD"	"MS2"	"24.31789"	"155.2"	"100.000"	"44.0783"	"12919"	"12919"	"12891"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"170.0"	""	"218.1"	""	"192.5"	""	"259.3"	"0.4"	"321.4"	"311.7"	""	"616"	"28"	"34.000"	"27.000"	"0.0498368651594064"	""	"0.0008629"	"0.01104"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VREYELR"	"[K].vREYELR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"1"	"3"	"3"	"0.2083"	"0.0000"	"1"	"1"	"1"	"398.56610"	"1193.68375"	"1193.68399"	"-0.20"	"-0.00008"	"5/62"	"5"	"62"	"2641331.7980957"	"HCD"	"MS2"	"13.19814"	"102.6"	"100.000"	"33.3790"	"8586"	"8586"	"8573"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"211.9"	""	"195.5"	""	"201.0"	""	"130.9"	"0.5"	"112.0"	"112.5"	""	"530"	"24"	"34.000"	"27.000"	"0.110216311780916"	""	"0.007602"	"0.09007"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTHNMYR"	"[R].sGTHNMYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"597.79718"	"1194.58708"	"1194.58871"	"-1.36"	"-0.00081"	"7/66"	"7"	"66"	"1714815.91491699"	"HCD"	"MS2"	"0"	"97.1"	"100.000"	"19.6574"	"3046"	"3046"	"3029"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"166.5"	""	"129.4"	""	"146.4"	""	"104.4"	""	"192.9"	"187.5"	""	"422"	"27"	"33.000"	"26.000"	"0.0409526920172076"	"14"	"0.0008629"	"0.0108"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTHNMYR"	"[R].sGTHNMYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"597.79761"	"1194.58794"	"1194.58871"	"-0.64"	"-0.00038"	"7/66"	"7"	"66"	"704169.479309082"	"HCD"	"MS2"	"0"	"41.1"	"100.000"	"19.6384"	"3045"	"3045"	"3019"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.6"	""	"56.5"	""	"57.3"	""	"47.4"	""	"80.7"	"79.6"	""	"431"	"27"	"33.000"	"26.000"	"0.0426036957444106"	"14"	"0.0002479"	"0.005613"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDHYIR"	"[K].dFDHYIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08415"	"Kynurenine--oxoglutarate transaminase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Kyat1 PE=1 SV=1"	"Q08415"	"Kynurenine--oxoglutarate transaminase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Kyat1 PE=1 SV=1"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"398.87451"	"1194.60898"	"1194.61049"	"-1.26"	"-0.00050"	"8/52"	"8"	"52"	"1254433.8651123"	"HCD"	"MS2"	"15.01888"	"51.6"	"100.000"	"48.9812"	"14910"	"14910"	"14888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.0"	""	"59.2"	""	"73.2"	""	"81.5"	""	"91.8"	"109.3"	""	"592"	"27"	"34.000"	"27.000"	"0.0560133711118913"	"19"	"0.003967"	"0.04174"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDHYIR"	"[K].dFDHYIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08415"	"Kynurenine--oxoglutarate transaminase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Kyat1 PE=1 SV=1"	"Q08415"	"Kynurenine--oxoglutarate transaminase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Kyat1 PE=1 SV=1"	"0"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"398.87457"	"1194.60917"	"1194.61049"	"-1.11"	"-0.00044"	"8/52"	"8"	"52"	"1279391.12677002"	"HCD"	"MS2"	"13.72148"	"50.8"	"100.000"	"48.5863"	"14762"	"14762"	"14735"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"73.5"	""	"61.5"	""	"62.9"	""	"87.2"	"0.7"	"97.3"	"98.3"	""	"593"	"23"	"34.000"	"27.000"	"0.150669274719206"	"22"	"0.002711"	"0.02584"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPLSGSYR"	"[K].eGPLSGSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"597.81873"	"1194.63017"	"1194.63162"	"-1.21"	"-0.00072"	"8/76"	"8"	"76"	"16965445.4713745"	"HCD"	"MS2"	"6.420722"	"678.5"	"100.000"	"40.0348"	"11275"	"11275"	"11257"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1147.9"	"6.7"	"816.3"	""	"947.6"	""	"1242.4"	""	"1071.2"	"1188.0"	""	"646"	"39"	"35.000"	"28.000"	"0.00396462871664165"	"27"	"0"	"0.0008414"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPLSGSYR"	"[K].eGPLSGSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"597.81885"	"1194.63042"	"1194.63162"	"-1.00"	"-0.00060"	"8/76"	"8"	"76"	"16123714.3968506"	"HCD"	"MS2"	"9.770518"	"675.3"	"100.000"	"39.8388"	"11205"	"11205"	"11188"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1062.0"	""	"798.4"	""	"941.8"	""	"1215.2"	""	"1105.6"	"1271.0"	""	"641"	"39"	"35.000"	"28.000"	"0.00394301141045368"	"27"	"0"	"0.0008665"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEAAYGALR"	"[R].dEAAYGALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63798"	"Proteasome activator complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Psme2 PE=2 SV=3"	"Q63798"	"Proteasome activator complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Psme2 PE=2 SV=3"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"597.81940"	"1194.63152"	"1194.63162"	"-0.08"	"-0.00005"	"7/66"	"7"	"66"	"5434966.47692871"	"HCD"	"MS2"	"12.37259"	"270.0"	"100.000"	"43.3468"	"12623"	"12623"	"12602"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"389.7"	""	"315.6"	""	"345.0"	""	"437.8"	"0.8"	"541.7"	"531.2"	""	"646"	"40"	"35.000"	"28.000"	"0.00298677510182046"	""	"0"	"0.0009239"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEAAYGALR"	"[R].dEAAYGALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63798"	"Proteasome activator complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Psme2 PE=2 SV=3"	"Q63798"	"Proteasome activator complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Psme2 PE=2 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"597.81940"	"1194.63152"	"1194.63162"	"-0.08"	"-0.00005"	"7/66"	"7"	"66"	"7213536.9239502"	"HCD"	"MS2"	"13.49963"	"349.3"	"100.000"	"43.2474"	"12593"	"12593"	"12575"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"475.9"	""	"419.5"	""	"444.1"	""	"551.7"	"6.0"	"707.9"	"709.5"	""	"646"	"45"	"35.000"	"28.000"	"0.000946678518215854"	""	"0"	"0.0007417"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPLSGSYR"	"[K].eGPLSGSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"597.81946"	"1194.63164"	"1194.63162"	"0.02"	"0.00001"	"8/76"	"8"	"76"	"4432692.98266602"	"HCD"	"MS2"	"0"	"197.5"	"100.000"	"40.6302"	"11517"	"11517"	"11503"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"324.4"	""	"219.6"	""	"276.0"	""	"353.0"	"0.7"	"343.5"	"352.0"	""	"646"	"35"	"35.000"	"28.000"	"0.0105731044445865"	"26"	"0"	"0.001242"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPLSGSYR"	"[K].eGPLSGSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"597.81958"	"1194.63188"	"1194.63162"	"0.22"	"0.00013"	"7/76"	"7"	"76"	"1716141.75537109"	"HCD"	"MS2"	"25.69193"	"121.6"	"100.000"	"38.1587"	"10511"	"10511"	"10487"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"157.0"	""	"127.2"	""	"139.2"	""	"219.7"	""	"241.6"	"272.2"	""	"647"	"8"	"35.000"	"28.000"	"4.63312785414992"	"18"	"0.004867"	"0.052"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPLSGSYR"	"[K].eGPLSGSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"597.81964"	"1194.63201"	"1194.63162"	"0.32"	"0.00019"	"8/76"	"8"	"76"	"5014782.37762451"	"HCD"	"MS2"	"0"	"218.5"	"100.000"	"40.4297"	"11446"	"11446"	"11430"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"350.1"	""	"258.2"	""	"310.2"	""	"388.5"	"0.6"	"370.6"	"389.6"	""	"647"	"39"	"35.000"	"28.000"	"0.00393436171209101"	"25"	"0"	"0.0008973"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPLSGSYR"	"[K].eGPLSGSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"597.81970"	"1194.63213"	"1194.63162"	"0.43"	"0.00026"	"8/76"	"8"	"76"	"61458531.6572266"	"HCD"	"MS2"	"0"	"458.1"	"17.901"	"40.3339"	"11398"	"11398"	"11382"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"722.8"	""	"516.1"	""	"637.0"	""	"845.2"	""	"775.3"	"844.5"	""	"644"	"39"	"35.000"	"28.000"	"0.00393419490573088"	"27"	"0"	"0.002323"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPLSGSYR"	"[K].eGPLSGSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"597.81989"	"1194.63249"	"1194.63162"	"0.73"	"0.00044"	"8/76"	"8"	"76"	"916918.223571777"	"HCD"	"MS2"	"0"	"58.9"	"100.000"	"37.8513"	"10387"	"10387"	"10376"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"98.3"	""	"60.4"	""	"81.3"	""	"98.8"	"0.1"	"114.5"	"104.2"	""	"645"	"30"	"35.000"	"28.000"	"0.0360188397409231"	"27"	"0"	"0.003378"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEAAYGALR"	"[R].dEAAYGALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63798"	"Proteasome activator complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Psme2 PE=2 SV=3"	"Q63798"	"Proteasome activator complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Psme2 PE=2 SV=3"	"0"	"2"	"2"	"0.5227"	"0.0000"	"1"	"1"	"1"	"597.81995"	"1194.63262"	"1194.63162"	"0.84"	"0.00050"	"13/66"	"13"	"66"	"4117094.56329346"	"HCD"	"MS2"	"0"	"182.3"	"100.000"	"43.5227"	"12705"	"12705"	"12692"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"261.3"	""	"202.6"	""	"216.5"	""	"297.3"	"2.0"	"381.3"	"369.8"	""	"645"	"44"	"35.000"	"28.000"	"0.00131077973655781"	""	"0"	"0.001126"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPLSGSYR"	"[K].eGPLSGSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"597.81995"	"1194.63262"	"1194.63162"	"0.84"	"0.00050"	"8/76"	"8"	"76"	"77657407.9094238"	"HCD"	"MS2"	"0"	"486.6"	"15.850"	"40.1239"	"11321"	"11321"	"11310"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"780.8"	""	"568.6"	""	"704.7"	""	"868.5"	""	"780.2"	"903.4"	""	"645"	"39"	"35.000"	"28.000"	"0.00390417898070031"	"27"	"0"	"0.001484"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEAAYGALR"	"[R].dEAAYGALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63798"	"Proteasome activator complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Psme2 PE=2 SV=3"	"Q63798"	"Proteasome activator complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Psme2 PE=2 SV=3"	"0"	"2"	"2"	"0.5227"	"0.0000"	"1"	"1"	"1"	"597.82037"	"1194.63347"	"1194.63162"	"1.55"	"0.00093"	"13/66"	"13"	"66"	"5458303.21826172"	"HCD"	"MS2"	"0"	"233.6"	"100.000"	"43.6244"	"12736"	"12736"	"12721"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"311.2"	""	"260.1"	""	"298.3"	""	"386.1"	"0.8"	"479.1"	"481.4"	""	"696"	"44"	"35.000"	"28.000"	"0.00137904755920893"	""	"0"	"0.001019"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPLSGSYR"	"[K].eGPLSGSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"597.82043"	"1194.63359"	"1194.63162"	"1.65"	"0.00099"	"6/76"	"6"	"76"	"984310.796142578"	"HCD"	"MS2"	"0"	"64.3"	"100.000"	"37.6504"	"10313"	"10313"	"10296"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"97.6"	""	"66.2"	""	"82.3"	""	"114.1"	"0.1"	"121.8"	"127.3"	""	"696"	"23"	"35.000"	"28.000"	"0.193900640628311"	"23"	"0.0003538"	"0.006644"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSDGEK"	"[R].sNSDGEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"597.82196"	"1194.63664"	"1194.63665"	"-0.01"	"0.00000"	"6/68"	"6"	"68"	"862235.94732666"	"HCD"	"MS2"	"0"	"83.5"	"100.000"	"20.6771"	"3445"	"3445"	"3425"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.3"	""	"83.4"	""	"74.6"	""	"156.9"	""	"207.1"	"189.9"	""	"680"	"15"	"35.000"	"28.000"	"1.1155239965846"	"23"	"0.005921"	"0.0671"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSDGEK"	"[R].sNSDGEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"597.82269"	"1194.63811"	"1194.63665"	"1.22"	"0.00073"	"10/68"	"10"	"68"	"766562.41784668"	"HCD"	"MS2"	"0"	"72.8"	"100.000"	"20.7470"	"3459"	"3459"	"3438"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"89.5"	""	"66.8"	""	"65.8"	""	"140.6"	""	"185.2"	"150.5"	""	"681"	"18"	"35.000"	"28.000"	"0.593085240389845"	"23"	"0.004867"	"0.05197"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSSNVDK"	"[R].sSSNVDk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"597.84021"	"1194.67314"	"1194.67304"	"0.09"	"0.00005"	"6/64"	"6"	"64"	"961620.814025879"	"HCD"	"MS2"	"0"	"90.2"	"100.000"	"23.5787"	"4625"	"4625"	"4604"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"122.9"	""	"94.7"	""	"110.8"	""	"151.5"	""	"202.8"	"175.9"	""	"563"	"25"	"34.000"	"27.000"	"0.0892233240846742"	"22"	"0.005921"	"0.06833"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEMEMGLR"	"[R].tEMEMGLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"598.30194"	"1195.59661"	"1195.60125"	"-3.88"	"-0.00232"	"7/62"	"7"	"62"	"2766350.49377441"	"HCD"	"MS2"	"24.9752"	"141.0"	"100.000"	"52.4811"	"16349"	"16349"	"16328"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"210.3"	""	"176.5"	""	"175.1"	""	"201.3"	""	"269.0"	"308.1"	""	"547"	"25"	"34.000"	"27.000"	"0.0905643617254887"	"27"	"0.003449"	"0.03422"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEMEMGLR"	"[R].tEMEMGLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"598.30365"	"1195.60002"	"1195.60125"	"-1.02"	"-0.00061"	"6/62"	"6"	"62"	"1844793.22320557"	"HCD"	"MS2"	"39.07329"	"105.0"	"100.000"	"52.7075"	"16430"	"16430"	"16407"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"154.9"	""	"133.7"	""	"141.6"	""	"146.0"	"0.3"	"205.4"	"213.4"	""	"545"	"27"	"34.000"	"27.000"	"0.0575925763355486"	"20"	"0.0003538"	"0.006766"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSSSVAAMK"	"[M].sGSSSVAAMk.[K]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"0"	"2"	"2"	"0.7969"	"0.0000"	"1"	"1"	"1"	"598.31262"	"1195.61797"	"1195.61900"	"-0.87"	"-0.00052"	"7/80"	"7"	"80"	"7152223.09362793"	"HCD"	"MS2"	"5.761899"	"246.3"	"100.000"	"48.0917"	"14548"	"14548"	"14533"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"281.1"	""	"329.3"	""	"306.9"	""	"304.1"	""	"549.2"	"576.6"	""	"584"	"64"	"34.000"	"27.000"	"1.11271220430982E-05"	""	"0"	"0.0003225"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSSSVAAMK"	"[M].sGSSSVAAMk.[K]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"0"	"2"	"2"	"0.8406"	"0.0000"	"1"	"1"	"1"	"598.31299"	"1195.61870"	"1195.61900"	"-0.25"	"-0.00015"	"7/80"	"7"	"80"	"4248958.81420898"	"HCD"	"MS2"	"40.81303"	"168.5"	"100.000"	"47.8110"	"14434"	"14434"	"14410"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"203.7"	""	"227.7"	""	"202.0"	""	"239.4"	"2.3"	"370.2"	"356.3"	""	"590"	"69"	"34.000"	"27.000"	"3.7481936103652E-06"	""	"0"	"0.0002843"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSSSVAAMK"	"[M].sGSSSVAAMk.[K]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"598.31305"	"1195.61882"	"1195.61900"	"-0.15"	"-0.00009"	"7/80"	"7"	"80"	"5019176.86425781"	"HCD"	"MS2"	"29.99747"	"199.2"	"100.000"	"47.5494"	"14339"	"14339"	"14317"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"238.8"	""	"265.3"	""	"245.9"	""	"269.0"	""	"429.3"	"445.2"	""	"590"	"60"	"34.000"	"27.000"	"3.03963905530277E-05"	"27"	"0"	"0.0001263"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYADQISR"	"[K].nYADQISR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"E9PSK7"	"C-Jun-amino-terminal kinase-interacting protein 3 OS=Rattus norvegicus OX=10116 GN=Mapk8ip3 PE=1 SV=2"	"E9PSK7"	"C-Jun-amino-terminal kinase-interacting protein 3 OS=Rattus norvegicus OX=10116 GN=Mapk8ip3 PE=1 SV=2"	"0"	"2"	"2"	"0.5152"	"0.0000"	"1"	"1"	"1"	"598.31653"	"1195.62578"	"1195.62687"	"-0.91"	"-0.00054"	"6/76"	"6"	"76"	"2242674.92663574"	"HCD"	"MS2"	"12.43499"	"157.6"	"100.000"	"35.5224"	"9452"	"9452"	"9436"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"204.0"	""	"192.6"	""	"210.5"	""	"275.6"	""	"316.2"	"296.3"	""	"578"	"33"	"34.000"	"27.000"	"0.01324030052605"	""	"0.0002479"	"0.0055"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTLYEAVR"	"[R].dTLYEAVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"598.32941"	"1195.65154"	"1195.65202"	"-0.40"	"-0.00024"	"6/64"	"6"	"64"	"3368318.00823975"	"HCD"	"MS2"	"2.833026"	"153.8"	"100.000"	"53.7014"	"16836"	"16836"	"16817"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"252.4"	""	"191.4"	""	"196.2"	""	"261.2"	""	"278.4"	"277.5"	""	"571"	"38"	"34.000"	"27.000"	"0.00478196191105548"	"26"	"0.0006732"	"0.008412"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTLYEAVR"	"[R].dTLYEAVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"598.32941"	"1195.65154"	"1195.65202"	"-0.40"	"-0.00024"	"6/64"	"6"	"64"	"4504681.33496094"	"HCD"	"MS2"	"5.686163"	"203.9"	"100.000"	"53.4687"	"16752"	"16752"	"16732"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"329.2"	""	"256.3"	""	"260.0"	""	"347.4"	""	"370.4"	"369.3"	""	"571"	"50"	"34.000"	"27.000"	"0.000277080595648587"	"27"	"0.0001301"	"0.004189"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTLYEAVR"	"[R].dTLYEAVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"598.32941"	"1195.65154"	"1195.65202"	"-0.40"	"-0.00024"	"6/64"	"6"	"64"	"7978981.98010254"	"HCD"	"MS2"	"0.3264147"	"360.9"	"100.000"	"54.0053"	"16961"	"16961"	"16944"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"613.0"	""	"420.3"	""	"495.6"	""	"597.0"	""	"651.4"	"641.5"	""	"571"	"43"	"34.000"	"27.000"	"0.00136021046732946"	"26"	"0.0008629"	"0.01042"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTLYEAVR"	"[R].dTLYEAVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"598.32947"	"1195.65166"	"1195.65202"	"-0.30"	"-0.00018"	"6/64"	"6"	"64"	"7826144.31005859"	"HCD"	"MS2"	"1.440474"	"336.6"	"100.000"	"53.7724"	"16877"	"16877"	"16860"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"548.6"	""	"417.4"	""	"445.5"	""	"545.8"	""	"613.6"	"618.6"	""	"575"	"50"	"34.000"	"27.000"	"0.000265850725007239"	"27"	"0.0004639"	"0.007739"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENGMDVFR"	"[K].eNGMDVFR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"598.79962"	"1196.59197"	"1196.59312"	"-0.97"	"-0.00058"	"6/76"	"6"	"76"	"571978.921081543"	"HCD"	"MS2"	"41.11679"	"34.4"	"100.000"	"56.7962"	"18093"	"18093"	"18068"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.0"	""	"48.4"	""	"45.5"	""	"44.0"	""	"63.1"	"60.6"	""	"440"	"32"	"33.000"	"26.000"	"0.01304435714076"	"17"	"0.0004639"	"0.007955"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENGMDVFR"	"[K].eNGMDVFR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"598.80042"	"1196.59355"	"1196.59312"	"0.36"	"0.00021"	"6/76"	"6"	"76"	"683697.180786133"	"HCD"	"MS2"	"53.93784"	"38.2"	"100.000"	"56.5776"	"18018"	"18018"	"17990"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"72.2"	""	"49.0"	""	"54.8"	""	"51.3"	""	"57.7"	"76.0"	""	"437"	"25"	"33.000"	"26.000"	"0.0750674116161226"	"19"	"0.000936"	"0.01315"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNHHALYR"	"[K].gNHHALYR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"598.82813"	"1196.64897"	"1196.64861"	"0.31"	"0.00018"	"5/70"	"5"	"70"	"201911.089599609"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"18.8703"	"2732"	"2732"	"2711"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.0"	""	"12.7"	""	"12.1"	""	"31.3"	""	"28.8"	"24.3"	""	"571"	"15"	"34.000"	"27.000"	"0.985385375803871"	"20"	"0.005921"	"0.0686"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQSPVVPAR"	"[K].nQSPVVPAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63560"	"Microtubule-associated protein 6 OS=Rattus norvegicus OX=10116 GN=Map6 PE=1 SV=1"	"Q63560"	"Microtubule-associated protein 6 OS=Rattus norvegicus OX=10116 GN=Map6 PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"598.85175"	"1196.69621"	"1196.69489"	"1.11"	"0.00066"	"8/80"	"8"	"80"	"875622.130981445"	"HCD"	"MS2"	"0"	"47.8"	"100.000"	"28.8661"	"6757"	"6757"	"6735"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.9"	""	"62.4"	""	"60.8"	""	"84.7"	""	"94.0"	"102.2"	""	"418"	"25"	"33.000"	"26.000"	"0.069686120267516"	"16"	"0.0003538"	"0.00621"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQSPVVPAR"	"[K].nQSPVVPAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63560"	"Microtubule-associated protein 6 OS=Rattus norvegicus OX=10116 GN=Map6 PE=1 SV=1"	"Q63560"	"Microtubule-associated protein 6 OS=Rattus norvegicus OX=10116 GN=Map6 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"598.85217"	"1196.69707"	"1196.69489"	"1.82"	"0.00109"	"7/80"	"7"	"80"	"906342.028381348"	"HCD"	"MS2"	"0"	"50.1"	"100.000"	"28.9450"	"6776"	"6776"	"6751"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.7"	""	"56.6"	""	"58.1"	""	"103.4"	"1.0"	"105.3"	"88.0"	""	"390"	"21"	"32.000"	"25.000"	"0.141590661699855"	"14"	"0.002547"	"0.02535"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYDVDFPR"	"[R].gYDVDFPR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P82808"	"Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Rattus norvegicus OX=10116 GN=Gfpt1 PE=1 SV=3"	"P82808; Q4KMC4"	"Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Rattus norvegicus OX=10116 GN=Gfpt1 PE=1 SV=3; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 OS=Rattus norvegicus OX=10116 GN=Gfpt2 PE=1 SV=3"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"599.30798"	"1197.60869"	"1197.61015"	"-1.22"	"-0.00073"	"7/60"	"7"	"60"	"1671310.08789063"	"HCD"	"MS2"	"27.42001"	"85.4"	"100.000"	"65.8564"	"21754"	"21754"	"21733"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"124.3"	""	"111.6"	""	"128.1"	""	"134.3"	"2.5"	"149.8"	"157.7"	""	"417"	"28"	"33.000"	"26.000"	"0.0307684812188024"	"23"	"0"	"0.003448"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYDVDFPR"	"[R].gYDVDFPR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P82808"	"Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Rattus norvegicus OX=10116 GN=Gfpt1 PE=1 SV=3"	"P82808; Q4KMC4"	"Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Rattus norvegicus OX=10116 GN=Gfpt1 PE=1 SV=3; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 OS=Rattus norvegicus OX=10116 GN=Gfpt2 PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"599.30823"	"1197.60918"	"1197.61015"	"-0.81"	"-0.00049"	"7/60"	"7"	"60"	"1783973.52722168"	"HCD"	"MS2"	"19.39956"	"87.7"	"100.000"	"65.9824"	"21790"	"21790"	"21769"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"120.8"	""	"115.3"	""	"133.3"	""	"136.1"	""	"157.2"	"169.1"	""	"416"	"28"	"33.000"	"26.000"	"0.0349996204702657"	"20"	"0.0001301"	"0.003815"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYDVDFPR"	"[R].gYDVDFPR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P82808"	"Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Rattus norvegicus OX=10116 GN=Gfpt1 PE=1 SV=3"	"P82808; Q4KMC4"	"Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Rattus norvegicus OX=10116 GN=Gfpt1 PE=1 SV=3; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 OS=Rattus norvegicus OX=10116 GN=Gfpt2 PE=1 SV=3"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"599.30835"	"1197.60942"	"1197.61015"	"-0.61"	"-0.00037"	"7/60"	"7"	"60"	"1220639.06768799"	"HCD"	"MS2"	"2.570437"	"64.8"	"100.000"	"66.1536"	"21875"	"21875"	"21860"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"110.2"	""	"69.0"	""	"96.0"	""	"102.9"	""	"105.1"	"130.3"	""	"413"	"29"	"33.000"	"26.000"	"0.0280491726720247"	"20"	"0"	"0.002948"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYDVDFPR"	"[R].gYDVDFPR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P82808"	"Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Rattus norvegicus OX=10116 GN=Gfpt1 PE=1 SV=3"	"P82808; Q4KMC4"	"Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Rattus norvegicus OX=10116 GN=Gfpt1 PE=1 SV=3; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 OS=Rattus norvegicus OX=10116 GN=Gfpt2 PE=1 SV=3"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"599.30841"	"1197.60954"	"1197.61015"	"-0.51"	"-0.00030"	"7/60"	"7"	"60"	"808897.757019043"	"HCD"	"MS2"	"3.002486"	"46.3"	"100.000"	"66.2982"	"21919"	"21919"	"21896"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.0"	""	"53.3"	""	"65.8"	""	"80.6"	""	"83.3"	"92.5"	""	"423"	"30"	"33.000"	"26.000"	"0.0236761112353303"	"21"	"0"	"0.002146"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLGNDGHR"	"[K].tVLGNDGHR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.7800"	"0.0000"	"1"	"1"	"1"	"399.88898"	"1197.65238"	"1197.65375"	"-1.15"	"-0.00046"	"6/82"	"6"	"82"	"32541028.7261963"	"HCD"	"MS2"	"37.05791"	"218.6"	"51.835"	"22.6262"	"4235"	"4235"	"4218"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"261.2"	""	"285.3"	""	"212.3"	""	"488.1"	"3.6"	"477.2"	"347.7"	""	"442"	"50"	"33.000"	"26.000"	"0.000202019026364925"	""	"0"	"0.0006802"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLGNDGHR"	"[K].tVLGNDGHR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.7885"	"0.0000"	"1"	"1"	"1"	"399.88922"	"1197.65311"	"1197.65375"	"-0.53"	"-0.00021"	"7/82"	"7"	"82"	"40972387.8934326"	"HCD"	"MS2"	"19.49612"	"205.5"	"44.009"	"22.6772"	"4239"	"4239"	"4219"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"238.6"	""	"248.6"	""	"205.3"	""	"465.4"	""	"446.3"	"347.1"	""	"441"	"52"	"33.000"	"26.000"	"0.000140737098705016"	""	"0"	"0.0006788"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLGNDGHR"	"[K].tVLGNDGHR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"599.33026"	"1197.65325"	"1197.65375"	"-0.42"	"-0.00025"	"6/82"	"6"	"82"	"7236695.7755127"	"HCD"	"MS2"	"0"	"279.5"	"100.000"	"22.6743"	"4255"	"4255"	"4230"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"300.9"	""	"315.1"	""	"230.9"	""	"691.6"	""	"646.8"	"473.8"	""	"441"	"38"	"33.000"	"26.000"	"0.00335280730306015"	"25"	"0"	"0.0005137"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLGNDGHR"	"[K].tVLGNDGHR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"599.33044"	"1197.65361"	"1197.65375"	"-0.12"	"-0.00007"	"6/82"	"6"	"82"	"6601757.10546875"	"HCD"	"MS2"	"0"	"263.0"	"100.000"	"22.7135"	"4254"	"4254"	"4235"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"286.8"	""	"283.7"	""	"229.6"	""	"648.1"	""	"623.2"	"431.3"	""	"432"	"38"	"33.000"	"26.000"	"0.00346301004389049"	"20"	"0"	"0.00164"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGGPGPSVR"	"[K].eLGGPGPSVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"O08653"	"Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1"	"O08653"	"Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"599.34259"	"1197.67790"	"1197.67890"	"-0.83"	"-0.00050"	"9/86"	"9"	"86"	"1299425.03094482"	"HCD"	"MS2"	"9.239368"	"67.9"	"100.000"	"39.0133"	"10868"	"10868"	"10844"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"97.5"	""	"75.9"	""	"86.6"	""	"114.6"	"1.2"	"130.0"	"137.8"	""	"414"	"44"	"33.000"	"26.000"	"0.000760274362031035"	"26"	"0"	"0.0003369"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGGPGPSVR"	"[K].eLGGPGPSVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"O08653"	"Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1"	"O08653"	"Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"599.34277"	"1197.67827"	"1197.67890"	"-0.53"	"-0.00032"	"6/86"	"6"	"86"	"1057667.0715332"	"HCD"	"MS2"	"18.2716"	"59.5"	"100.000"	"39.1774"	"10926"	"10926"	"10899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"72.2"	""	"71.2"	""	"73.1"	""	"96.9"	""	"126.5"	"125.3"	""	"414"	"38"	"33.000"	"26.000"	"0.00293744906989642"	"25"	"0"	"0.002043"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDSSQDR"	"[K].yVDSSQDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2IBC5"	"Caveolin-2 OS=Rattus norvegicus OX=10116 GN=Cav2 PE=1 SV=2"	"Q2IBC5"	"Caveolin-2 OS=Rattus norvegicus OX=10116 GN=Cav2 PE=1 SV=2"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"599.79803"	"1198.58879"	"1198.59015"	"-1.13"	"-0.00068"	"6/68"	"6"	"68"	"663970.667358398"	"HCD"	"MS2"	"0"	"49.0"	"100.000"	"24.9603"	"5173"	"5173"	"5157"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.0"	""	"48.4"	""	"45.9"	""	"92.8"	""	"119.3"	"106.1"	""	"333"	"35"	"32.000"	"25.000"	"0.00490246202027493"	"24"	"0"	"0.003559"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDSSQDR"	"[K].yVDSSQDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2IBC5"	"Caveolin-2 OS=Rattus norvegicus OX=10116 GN=Cav2 PE=1 SV=2"	"Q2IBC5"	"Caveolin-2 OS=Rattus norvegicus OX=10116 GN=Cav2 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"599.79895"	"1198.59062"	"1198.59015"	"0.40"	"0.00024"	"6/68"	"6"	"68"	"611898.521179199"	"HCD"	"MS2"	"0"	"43.2"	"100.000"	"25.0204"	"5183"	"5183"	"5168"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.7"	""	"37.1"	""	"44.6"	""	"76.4"	""	"112.7"	"94.6"	""	"329"	"30"	"32.000"	"25.000"	"0.0151413954553397"	"23"	"0.0004639"	"0.007607"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYESIEE"	"[K].sLYESIEE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"599.80499"	"1198.60271"	"1198.60407"	"-1.13"	"-0.00068"	"7/72"	"7"	"72"	"537424.022644043"	"HCD"	"MS2"	"17.1615"	"23.4"	"100.000"	"79.0849"	"27115"	"27115"	"27097"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.1"	""	"25.9"	""	"33.3"	""	"34.5"	""	"42.3"	"47.4"	""	"329"	"37"	"32.000"	"25.000"	"0.00363216778581609"	"21"	"0.0002479"	"0.005655"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYESIEE"	"[K].sLYESIEE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"599.80505"	"1198.60283"	"1198.60407"	"-1.03"	"-0.00062"	"6/72"	"6"	"72"	"598218.921936035"	"HCD"	"MS2"	"9.818341"	"21.0"	"100.000"	"78.8243"	"27006"	"27006"	"26985"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.0"	""	"24.5"	""	"28.2"	""	"32.0"	""	"32.9"	"45.0"	""	"329"	"31"	"32.000"	"25.000"	"0.0131270126055582"	"17"	"0.001134"	"0.01394"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYESIEE"	"[K].sLYESIEE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"599.80530"	"1198.60332"	"1198.60407"	"-0.62"	"-0.00037"	"7/72"	"7"	"72"	"506367.858398438"	"HCD"	"MS2"	"19.39484"	"20.8"	"100.000"	"79.1149"	"27123"	"27123"	"27105"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.1"	""	"21.2"	""	"26.8"	""	"28.8"	"1.1"	"41.4"	"46.8"	""	"320"	"38"	"32.000"	"25.000"	"0.00249528400452312"	"22"	"0.0002479"	"0.00573"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYESIEE"	"[K].sLYESIEE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"599.80548"	"1198.60369"	"1198.60407"	"-0.32"	"-0.00019"	"6/72"	"6"	"72"	"594629.715942383"	"HCD"	"MS2"	"9.812037"	"19.4"	"100.000"	"78.7896"	"26996"	"26996"	"26989"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.5"	""	"22.9"	""	"24.8"	""	"35.5"	""	"36.1"	"36.5"	""	"327"	"47"	"32.000"	"25.000"	"0.00031660499110527"	"20"	"0"	"0.002531"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEGQVLVLDGR"	"[M].aEGQVLVLDGR.[S]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"599.82501"	"1198.64275"	"1198.64263"	"0.10"	"0.00006"	"8/108"	"8"	"108"	"421698.008117676"	"HCD"	"MS2"	"48.3783"	"14.2"	"100.000"	"82.7894"	"28604"	"28604"	"28587"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.0"	""	"19.8"	""	"18.4"	""	"18.0"	""	"28.1"	"31.8"	"NoQuanLabels"	"439"	"33"	"33.000"	"26.000"	"0.0110518383628945"	"21"	"0"	"0.0008688"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEGQVLVLDGR"	"[M].aEGQVLVLDGR.[S]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"599.82526"	"1198.64324"	"1198.64263"	"0.51"	"0.00030"	"9/108"	"9"	"108"	"462277.110839844"	"HCD"	"MS2"	"51.95025"	"15.2"	"100.000"	"82.8211"	"28614"	"28614"	"28605"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.2"	""	"25.8"	""	"22.2"	""	"15.7"	""	"24.9"	"33.3"	"NoQuanLabels"	"454"	"37"	"33.000"	"26.000"	"0.00449806634857757"	"20"	"0"	"0.0001557"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHQAEGK"	"[R].aHQAEGk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"599.85052"	"1198.69377"	"1198.69444"	"-0.56"	"-0.00033"	"12/56"	"12"	"56"	"1291575.43200684"	"HCD"	"MS2"	"0"	"104.4"	"100.000"	"18.9960"	"2787"	"2787"	"2760"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"164.8"	""	"109.0"	""	"143.5"	""	"176.7"	""	"198.5"	"198.0"	""	"419"	"42"	"33.000"	"26.000"	"0.00131881545308583"	"18"	"0.000936"	"0.01136"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHQAEGK"	"[R].aHQAEGk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"599.85059"	"1198.69390"	"1198.69444"	"-0.46"	"-0.00027"	"6/56"	"6"	"56"	"1298067.75274658"	"HCD"	"MS2"	"0"	"102.8"	"100.000"	"19.0380"	"2800"	"2800"	"2777"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"169.2"	""	"114.8"	""	"144.0"	""	"162.1"	""	"183.2"	"207.7"	""	"419"	"37"	"33.000"	"26.000"	"0.00441757597411024"	"18"	"0.001211"	"0.01496"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APDVTTLPR"	"[K].aPDVTTLPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8CGU6"	"Nicastrin OS=Rattus norvegicus OX=10116 GN=Ncstn PE=1 SV=1"	"Q8CGU6"	"Nicastrin OS=Rattus norvegicus OX=10116 GN=Ncstn PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"599.85364"	"1198.70000"	"1198.69930"	"0.58"	"0.00035"	"6/70"	"6"	"70"	"492054.444702148"	"HCD"	"MS2"	"0"	"31.7"	"100.000"	"54.1013"	"17011"	"17011"	"16987"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.3"	""	"41.7"	""	"39.1"	""	"56.1"	""	"60.7"	"58.8"	""	"383"	"30"	"32.000"	"25.000"	"0.0196412343877144"	"21"	"0.001374"	"0.01722"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGQIIPTAR"	"[R].gGGQIIPTAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"599.85858"	"1198.70989"	"1198.71054"	"-0.54"	"-0.00033"	"8/84"	"8"	"84"	"1288569.85925293"	"HCD"	"MS2"	"30.38516"	"79.7"	"100.000"	"41.8796"	"12024"	"12024"	"12001"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"136.6"	""	"92.0"	""	"102.1"	""	"116.9"	""	"153.6"	"160.2"	""	"322"	"25"	"32.000"	"25.000"	"0.0480646601645791"	"21"	"0.0001301"	"0.004599"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGTPEVLR"	"[K].vVGTPEVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"599.87073"	"1198.73418"	"1198.73569"	"-1.26"	"-0.00076"	"6/68"	"6"	"68"	"3321586.2666626"	"HCD"	"MS2"	"45.01398"	"152.8"	"100.000"	"61.3349"	"19908"	"19908"	"19889"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"218.7"	""	"207.3"	""	"191.8"	""	"249.3"	""	"287.4"	"295.5"	""	"265"	"32"	"31.000"	"24.000"	"0.00811364269035324"	"20"	"0.002937"	"0.02746"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGTPEVLR"	"[K].vVGTPEVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"599.87103"	"1198.73479"	"1198.73569"	"-0.75"	"-0.00045"	"6/68"	"6"	"68"	"2578602.03839111"	"HCD"	"MS2"	"44.44779"	"125.7"	"100.000"	"61.1766"	"19859"	"19859"	"19842"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"177.3"	""	"182.7"	""	"170.2"	""	"195.7"	""	"236.5"	"231.0"	""	"233"	"34"	"30.000"	"23.000"	"0.00421042489975149"	"20"	"0.0003538"	"0.007415"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGTPEVLR"	"[K].vVGTPEVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"599.87122"	"1198.73516"	"1198.73569"	"-0.45"	"-0.00027"	"6/68"	"6"	"68"	"2105042.71520996"	"HCD"	"MS2"	"43.97055"	"94.8"	"100.000"	"61.6549"	"20039"	"20039"	"20017"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"136.5"	""	"131.7"	""	"128.8"	""	"140.7"	""	"171.9"	"190.6"	""	"233"	"25"	"30.000"	"23.000"	"0.0335216915316705"	"19"	"0.004069"	"0.04452"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGTPEVLR"	"[K].vVGTPEVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"599.87140"	"1198.73552"	"1198.73569"	"-0.14"	"-0.00008"	"6/68"	"6"	"68"	"2001782.73596191"	"HCD"	"MS2"	"37.9207"	"92.5"	"100.000"	"61.4947"	"19989"	"19989"	"19969"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"134.4"	""	"126.9"	""	"130.8"	""	"130.9"	""	"181.8"	"172.8"	""	"233"	"27"	"30.000"	"23.000"	"0.0233520991188041"	"20"	"0.006189"	"0.07066"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGTIAGLNVLR"	"[K].DAGTIAGLNVLR.[I]"	""	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"600.34430"	"1199.68132"	"1199.67426"	"5.89"	"0.00353"	"6/100"	"6"	"100"	"1976605.42041016"	"HCD"	"MS2"	"34.89645"	"62.9"	"100.000"	"81.0355"	"27900"	"27900"	"27889"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"70.3"	""	"77.1"	""	"84.6"	""	"102.3"	"0.6"	"119.6"	"142.5"	"NoQuanLabels"	"501"	"2"	"33.000"	"26.000"	"14.2826150206327"	"13"	"0.009021"	"0.116"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGTIAGLNVLR"	"[K].DAGTIAGLNVLR.[I]"	""	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"600.34442"	"1199.68157"	"1199.67426"	"6.09"	"0.00365"	"7/100"	"7"	"100"	"2412684.56140137"	"HCD"	"MS2"	"21.91542"	"74.9"	"100.000"	"81.0916"	"27924"	"27924"	"27911"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"98.0"	""	"95.1"	"2.1"	"100.0"	""	"119.6"	""	"139.3"	"162.1"	"NoQuanLabels"	"501"	"5"	"33.000"	"26.000"	"7.65257738860487"	"13"	"0.005427"	"0.06267"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPDVLER"	"[K].eLPDVLER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"600.34479"	"1199.68230"	"1199.68332"	"-0.85"	"-0.00051"	"7/68"	"7"	"68"	"1283601.0234375"	"HCD"	"MS2"	"10.95542"	"59.4"	"100.000"	"74.7597"	"25378"	"25378"	"25360"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.8"	""	"78.9"	""	"79.8"	""	"99.5"	"0.0"	"101.5"	"106.7"	""	"483"	"33"	"33.000"	"26.000"	"0.0120203506022413"	""	"0"	"0.001962"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPDVLER"	"[K].eLPDVLER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"600.34491"	"1199.68254"	"1199.68332"	"-0.65"	"-0.00039"	"7/68"	"7"	"68"	"1190661.75799561"	"HCD"	"MS2"	"17.47927"	"52.0"	"100.000"	"74.8901"	"25413"	"25413"	"25397"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.8"	""	"67.1"	""	"75.7"	""	"78.0"	""	"90.8"	"96.9"	""	"483"	"29"	"33.000"	"26.000"	"0.0281136436102633"	""	"0"	"0.002498"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPDVLER"	"[K].eLPDVLER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"0"	"2"	"2"	"0.4194"	"0.0000"	"1"	"1"	"1"	"600.34503"	"1199.68279"	"1199.68332"	"-0.44"	"-0.00027"	"7/68"	"7"	"68"	"2383001.06591797"	"HCD"	"MS2"	"0.8452198"	"102.4"	"100.000"	"75.0457"	"25488"	"25488"	"25476"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"168.1"	""	"126.5"	""	"146.7"	""	"155.0"	"1.4"	"176.2"	"195.4"	""	"483"	"31"	"33.000"	"26.000"	"0.0190509718404881"	""	"0.0001301"	"0.004044"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPDVLER"	"[K].eLPDVLER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"600.34552"	"1199.68376"	"1199.68332"	"0.37"	"0.00022"	"7/68"	"7"	"68"	"2105022.38458252"	"HCD"	"MS2"	"0"	"88.8"	"100.000"	"75.1935"	"25536"	"25536"	"25520"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"143.4"	""	"111.5"	""	"120.1"	""	"135.2"	""	"164.8"	"167.0"	""	"476"	"32"	"33.000"	"26.000"	"0.0163146197895733"	""	"0"	"0.002877"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPHVGDYR"	"[K].qPHVGDYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"400.88205"	"1200.63160"	"1200.63229"	"-0.58"	"-0.00023"	"6/70"	"6"	"70"	"12578714.710144"	"HCD"	"MS2"	"44.00505"	"234.8"	"58.698"	"24.4953"	"4973"	"4973"	"4960"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"326.0"	""	"309.5"	""	"324.6"	""	"374.8"	"2.4"	"429.4"	"458.2"	""	"416"	"34"	"33.000"	"26.000"	"0.00899628768552817"	"22"	"0.002973"	"0.02948"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPHVGDYR"	"[K].qPHVGDYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"600.81952"	"1200.63176"	"1200.63229"	"-0.44"	"-0.00026"	"12/70"	"12"	"70"	"849641.237670898"	"HCD"	"MS2"	"0"	"38.9"	"100.000"	"24.4770"	"4966"	"4966"	"4952"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.8"	""	"38.1"	""	"43.9"	""	"64.8"	""	"91.4"	"79.3"	""	"418"	"31"	"33.000"	"26.000"	"0.0181612729720837"	"19"	"0"	"0.003794"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPHVGDYR"	"[K].qPHVGDYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"400.88217"	"1200.63196"	"1200.63229"	"-0.27"	"-0.00011"	"6/70"	"6"	"70"	"15902846.7196045"	"HCD"	"MS2"	"63.60104"	"237.8"	"44.029"	"24.3974"	"4949"	"4949"	"4939"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"307.9"	""	"303.7"	""	"333.1"	""	"389.6"	"7.4"	"454.0"	"459.0"	""	"416"	"28"	"33.000"	"26.000"	"0.0347586847776627"	"18"	"0.003449"	"0.03447"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPHVGDYR"	"[K].qPHVGDYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"600.81982"	"1200.63237"	"1200.63229"	"0.07"	"0.00004"	"7/70"	"7"	"70"	"1204070.15258789"	"HCD"	"MS2"	"0"	"51.6"	"100.000"	"24.4184"	"4958"	"4958"	"4939"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.4"	""	"53.0"	""	"60.5"	""	"91.2"	"1.1"	"103.3"	"114.2"	""	"409"	"29"	"33.000"	"26.000"	"0.0235881191224413"	"21"	"0.000936"	"0.01268"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDEINDR"	"[K].iPDEINDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6NX65"	"Programmed cell death protein 10 OS=Rattus norvegicus OX=10116 GN=Pdcd10 PE=2 SV=1"	"Q6NX65"	"Programmed cell death protein 10 OS=Rattus norvegicus OX=10116 GN=Pdcd10 PE=2 SV=1"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"600.82471"	"1200.64214"	"1200.64218"	"-0.04"	"-0.00002"	"9/68"	"9"	"68"	"2870057.82073975"	"HCD"	"MS2"	"8.296144"	"111.3"	"100.000"	"51.4944"	"15946"	"15946"	"15925"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"141.1"	""	"109.1"	""	"125.9"	""	"224.5"	""	"220.8"	"236.3"	""	"446"	"26"	"33.000"	"26.000"	"0.0514404623084575"	"25"	"0.004282"	"0.04619"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDEINDR"	"[K].iPDEINDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6NX65"	"Programmed cell death protein 10 OS=Rattus norvegicus OX=10116 GN=Pdcd10 PE=2 SV=1"	"Q6NX65"	"Programmed cell death protein 10 OS=Rattus norvegicus OX=10116 GN=Pdcd10 PE=2 SV=1"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"600.82489"	"1200.64250"	"1200.64218"	"0.27"	"0.00016"	"9/68"	"9"	"68"	"2516929.18206787"	"HCD"	"MS2"	"13.09091"	"101.2"	"100.000"	"51.8105"	"16064"	"16064"	"16043"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"138.6"	""	"95.5"	""	"111.5"	""	"182.2"	""	"205.7"	"230.3"	""	"446"	"28"	"33.000"	"26.000"	"0.0376968327756448"	"25"	"0.003922"	"0.03972"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGYSSGK"	"[R].sGGYSSGk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"600.83429"	"1200.66130"	"1200.66247"	"-0.97"	"-0.00059"	"7/66"	"7"	"66"	"1147708.82446289"	"HCD"	"MS2"	"0"	"103.9"	"100.000"	"25.5186"	"5385"	"5385"	"5365"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"161.7"	""	"121.9"	""	"148.5"	""	"154.2"	""	"183.5"	"216.2"	""	"511"	"34"	"34.000"	"27.000"	"0.00966920803952173"	"16"	"0"	"0.003061"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAIQEIQR"	"[K].nAIQEIQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"0"	"2"	"2"	"0.3947"	"0.0000"	"1"	"1"	"1"	"600.84814"	"1200.68901"	"1200.68980"	"-0.66"	"-0.00039"	"6/70"	"6"	"70"	"1659578.04797363"	"HCD"	"MS2"	"19.35494"	"92.8"	"100.000"	"38.7420"	"10757"	"10757"	"10736"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"145.5"	""	"101.5"	""	"118.0"	""	"172.1"	"0.6"	"175.4"	"166.2"	""	"488"	"38"	"33.000"	"26.000"	"0.00353500332264921"	""	"0.0002479"	"0.005978"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAIQEIQR"	"[K].nAIQEIQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"0"	"2"	"2"	"0.3947"	"0.0000"	"1"	"1"	"1"	"600.84857"	"1200.68987"	"1200.68980"	"0.05"	"0.00003"	"6/70"	"6"	"70"	"1662751.46105957"	"HCD"	"MS2"	"35.43213"	"90.1"	"100.000"	"38.9084"	"10816"	"10816"	"10789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"138.6"	""	"105.9"	""	"125.1"	""	"149.5"	"0.0"	"170.7"	"164.3"	""	"487"	"38"	"33.000"	"26.000"	"0.00376269456027604"	""	"0.0002479"	"0.005417"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTVPLEVR"	"[R].tGTVPLEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"600.86066"	"1200.71404"	"1200.71495"	"-0.76"	"-0.00046"	"7/76"	"7"	"76"	"1110686.27185059"	"HCD"	"MS2"	"18.36427"	"63.2"	"100.000"	"52.5901"	"16382"	"16382"	"16361"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.9"	""	"69.8"	""	"84.6"	""	"118.8"	"0.7"	"122.9"	"121.7"	""	"504"	"27"	"34.000"	"27.000"	"0.0536291039587643"	"23"	"0.0001301"	"0.004129"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTVPLEVR"	"[R].tGTVPLEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"600.86066"	"1200.71404"	"1200.71495"	"-0.76"	"-0.00046"	"12/76"	"12"	"76"	"7057508.84277344"	"HCD"	"MS2"	"40.14408"	"266.8"	"100.000"	"51.9807"	"16134"	"16134"	"16123"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"403.7"	""	"309.4"	""	"371.8"	""	"455.9"	""	"430.1"	"556.3"	""	"504"	"24"	"34.000"	"27.000"	"0.0940590397645215"	"20"	"0"	"0.00151"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTVPLEVR"	"[R].tGTVPLEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"600.86078"	"1200.71428"	"1200.71495"	"-0.56"	"-0.00034"	"12/76"	"12"	"76"	"6035910.25805664"	"HCD"	"MS2"	"48.27759"	"224.0"	"100.000"	"51.6438"	"16007"	"16007"	"15989"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"339.4"	""	"241.4"	""	"314.7"	""	"380.6"	""	"385.0"	"462.2"	""	"504"	"25"	"34.000"	"27.000"	"0.0871767232121827"	"22"	"0"	"0.001095"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTVPLEVR"	"[R].tGTVPLEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"600.86084"	"1200.71440"	"1200.71495"	"-0.46"	"-0.00028"	"7/76"	"7"	"76"	"1405531.68475342"	"HCD"	"MS2"	"15.0668"	"75.4"	"100.000"	"52.2512"	"16255"	"16255"	"16236"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.0"	""	"79.3"	""	"89.8"	""	"130.0"	"1.1"	"151.4"	"158.9"	""	"504"	"29"	"34.000"	"27.000"	"0.0351884826986096"	"22"	"0"	"0.00143"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTVPLEVR"	"[R].tGTVPLEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"600.86096"	"1200.71465"	"1200.71495"	"-0.25"	"-0.00015"	"12/76"	"12"	"76"	"12291285.7092896"	"HCD"	"MS2"	"0"	"321.4"	"74.084"	"52.2863"	"16258"	"16258"	"16240"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"518.3"	""	"379.7"	""	"472.5"	""	"537.8"	""	"479.9"	"656.0"	""	"505"	"39"	"34.000"	"27.000"	"0.00306380684742407"	"20"	"0"	"0.0009725"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTVPLEVR"	"[R].tGTVPLEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"600.86121"	"1200.71514"	"1200.71495"	"0.15"	"0.00009"	"12/76"	"12"	"76"	"14891398.1067505"	"HCD"	"MS2"	"0.3336864"	"426.1"	"76.418"	"51.9404"	"16128"	"16128"	"16111"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"694.3"	""	"487.5"	""	"638.4"	""	"687.8"	""	"650.6"	"878.4"	""	"505"	"40"	"34.000"	"27.000"	"0.00232949285356578"	"21"	"0"	"0.0006051"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQPFDVGPR"	"[K].gQPFDVGPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"601.32953"	"1201.65178"	"1201.65269"	"-0.75"	"-0.00045"	"7/78"	"7"	"78"	"2376433.82171631"	"HCD"	"MS2"	"46.53849"	"102.5"	"100.000"	"50.1568"	"15402"	"15402"	"15378"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"157.0"	""	"148.9"	""	"148.2"	""	"164.9"	""	"167.2"	"184.0"	""	"566"	"39"	"34.000"	"27.000"	"0.00332496008047887"	"25"	"0"	"0.000382"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQPFDVGPR"	"[K].gQPFDVGPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"601.32977"	"1201.65227"	"1201.65269"	"-0.35"	"-0.00021"	"7/78"	"7"	"78"	"3121031.13464355"	"HCD"	"MS2"	"26.70906"	"135.2"	"100.000"	"50.5261"	"15541"	"15541"	"15518"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"205.6"	""	"185.5"	""	"202.3"	""	"203.2"	"0.1"	"256.2"	"227.3"	""	"570"	"41"	"34.000"	"27.000"	"0.00219707488683362"	"27"	"0"	"0.000549"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQPFDVGPR"	"[K].gQPFDVGPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.1613"	"0.0000"	"1"	"1"	"1"	"601.32990"	"1201.65251"	"1201.65269"	"-0.14"	"-0.00009"	"8/78"	"8"	"78"	"9863689.70141602"	"HCD"	"MS2"	"25.43958"	"359.5"	"100.000"	"50.4419"	"15517"	"15517"	"15499"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"554.9"	""	"483.3"	""	"523.1"	""	"552.3"	""	"634.4"	"662.5"	""	"552"	"31"	"34.000"	"27.000"	"0.0201330272830261"	""	"0"	"0.001344"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDLAAVDVR"	"[K].nDLAAVDVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.1944"	"0.0000"	"1"	"1"	"1"	"601.33020"	"1201.65312"	"1201.67382"	"-17.22"	"-0.01035"	"7/90"	"7"	"90"	"9552355.45202637"	"HCD"	"MS2"	"40.89482"	"357.0"	"100.000"	"50.8249"	"15663"	"15663"	"15649"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"545.0"	""	"492.1"	""	"495.9"	""	"561.9"	"4.6"	"642.2"	"639.1"	""	"552"	"36"	"34.000"	"27.000"	"0.00727627462487805"	""	"0.0005778"	"0.008097"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDLAAVDVR"	"[K].nDLAAVDVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"601.33984"	"1201.67241"	"1201.67382"	"-1.17"	"-0.00070"	"7/90"	"7"	"90"	"8517969.46722412"	"HCD"	"MS2"	"49.92503"	"330.1"	"100.000"	"50.8592"	"15676"	"15676"	"15662"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"507.6"	""	"437.3"	""	"456.9"	""	"531.6"	""	"576.9"	"617.0"	""	"581"	"39"	"34.000"	"27.000"	"0.00360699995355595"	""	"0"	"0.003462"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAEENQR"	"[K].lLAEENQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"601.33997"	"1201.67266"	"1201.67382"	"-0.97"	"-0.00058"	"5/62"	"5"	"62"	"2125159.31170654"	"HCD"	"MS2"	"28.18576"	"96.9"	"100.000"	"39.6593"	"11131"	"11131"	"11110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"135.3"	""	"115.3"	""	"134.8"	""	"144.8"	""	"173.1"	"217.3"	""	"585"	"17"	"34.000"	"27.000"	"0.563801037108349"	"20"	"0.0023"	"0.02415"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILNDVQDR"	"[K].iLNDVQDR.[F]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.4848"	"0.0000"	"1"	"1"	"1"	"601.34003"	"1201.67278"	"1201.67382"	"-0.87"	"-0.00052"	"6/72"	"6"	"72"	"4174848.64672852"	"HCD"	"MS2"	"15.1164"	"210.9"	"100.000"	"51.5685"	"15965"	"15965"	"15947"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"209.2"	""	"174.7"	""	"190.0"	""	"476.7"	"1.7"	"492.1"	"463.3"	""	"578"	"33"	"34.000"	"27.000"	"0.0142855788539195"	""	"0.0003538"	"0.007234"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDLAAVDVR"	"[K].nDLAAVDVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"601.34009"	"1201.67290"	"1201.67382"	"-0.76"	"-0.00046"	"7/90"	"7"	"90"	"8129050.26934814"	"HCD"	"MS2"	"48.01461"	"307.0"	"100.000"	"50.5476"	"15560"	"15560"	"15543"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"464.5"	""	"417.5"	""	"444.4"	""	"514.5"	""	"528.5"	"541.0"	""	"578"	"36"	"34.000"	"27.000"	"0.00751446113754763"	""	"0"	"0.0007578"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EANEILQR"	"[K].eANEILQR.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"D3ZLZ7"	"Inosine-5'-monophosphate dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Impdh1 PE=3 SV=1"	"D3ZLZ7; E9PU28"	"Inosine-5'-monophosphate dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Impdh1 PE=3 SV=1; Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"601.34015"	"1201.67302"	"1201.67382"	"-0.66"	"-0.00040"	"6/72"	"6"	"72"	"1718192.33435059"	"HCD"	"MS2"	"0"	"87.7"	"100.000"	"41.6335"	"11924"	"11924"	"11897"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"151.2"	""	"102.9"	""	"114.7"	""	"159.5"	""	"161.2"	"146.1"	""	"578"	"35"	"34.000"	"27.000"	"0.00968050119166121"	""	"0.0001301"	"0.004118"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILNDVQDR"	"[K].iLNDVQDR.[F]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.5106"	"0.0000"	"1"	"1"	"1"	"601.34027"	"1201.67327"	"1201.67382"	"-0.46"	"-0.00028"	"7/72"	"7"	"72"	"6182841.61901855"	"HCD"	"MS2"	"3.402235"	"272.7"	"100.000"	"51.0958"	"15784"	"15784"	"15767"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"300.7"	""	"235.2"	""	"243.9"	""	"544.5"	"5.5"	"668.3"	"599.4"	""	"580"	"47"	"34.000"	"27.000"	"0.000596208272835401"	""	"0.0001301"	"0.003918"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAEENQR"	"[K].lLAEENQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"601.34064"	"1201.67400"	"1201.67382"	"0.15"	"0.00009"	"6/62"	"6"	"62"	"1335389.72790527"	"HCD"	"MS2"	"13.51059"	"80.0"	"100.000"	"39.6442"	"11116"	"11116"	"11085"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"129.5"	""	"103.5"	""	"101.6"	""	"121.1"	"1.7"	"146.8"	"154.2"	""	"579"	"36"	"34.000"	"27.000"	"0.00697667621604769"	""	"0.0001301"	"0.004212"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILNDVQDR"	"[K].iLNDVQDR.[F]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"1"	"601.34064"	"1201.67400"	"1201.67382"	"0.15"	"0.00009"	"12/72"	"12"	"72"	"3884693.39752197"	"HCD"	"MS2"	"12.51287"	"185.7"	"100.000"	"51.2644"	"15841"	"15841"	"15826"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"218.6"	""	"181.9"	""	"182.2"	""	"375.5"	"5.1"	"412.5"	"389.9"	""	"579"	"32"	"34.000"	"27.000"	"0.0193485564136114"	""	"0.0003538"	"0.006287"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPSPTSQR"	"[R].lSPSPTSQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"601.34088"	"1201.67449"	"1201.67382"	"0.56"	"0.00033"	"7/76"	"7"	"76"	"4056360.59741211"	"HCD"	"MS2"	"15.73327"	"219.6"	"100.000"	"29.3050"	"6936"	"6936"	"6912"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"223.1"	""	"218.8"	""	"179.4"	""	"370.1"	""	"525.3"	"585.0"	""	"579"	"20"	"34.000"	"27.000"	"0.30877957709616"	"22"	"0.00447"	"0.04666"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EANEILQR"	"[K].eANEILQR.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"D3ZLZ7"	"Inosine-5'-monophosphate dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Impdh1 PE=3 SV=1"	"D3ZLZ7; E9PU28"	"Inosine-5'-monophosphate dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Impdh1 PE=3 SV=1; Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"601.34100"	"1201.67473"	"1201.67382"	"0.76"	"0.00046"	"5/72"	"5"	"72"	"1525734.1807251"	"HCD"	"MS2"	"0"	"77.1"	"100.000"	"41.4445"	"11857"	"11857"	"11828"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"119.2"	""	"87.7"	""	"102.6"	""	"134.6"	"2.7"	"139.9"	"143.9"	""	"579"	"34"	"34.000"	"27.000"	"0.0122644638671342"	"24"	"0.0001301"	"0.004148"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLEEIER"	"[K].aLLEEIER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6042"	"0.0000"	"1"	"1"	"1"	"601.35229"	"1201.69731"	"1201.69897"	"-1.38"	"-0.00083"	"12/62"	"12"	"62"	"2631893.26428223"	"HCD"	"MS2"	"7.422095"	"113.0"	"100.000"	"80.3979"	"27644"	"27644"	"27631"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"172.4"	""	"170.1"	""	"172.2"	""	"136.5"	"1.0"	"186.7"	"230.5"	""	"705"	"48"	"35.000"	"28.000"	"0.00060556270647305"	""	"0"	"0.002342"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLEEIER"	"[K].aLLEEIER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"601.35260"	"1201.69792"	"1201.69897"	"-0.87"	"-0.00052"	"11/62"	"11"	"62"	"1471799.24017334"	"HCD"	"MS2"	"11.22244"	"64.2"	"100.000"	"80.1278"	"27535"	"27535"	"27526"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"96.7"	""	"92.4"	""	"89.7"	""	"88.2"	""	"101.6"	"140.9"	""	"733"	"42"	"35.000"	"28.000"	"0.00242144148694784"	"23"	"0"	"0.002505"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLEEIER"	"[K].aLLEEIER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"601.35266"	"1201.69805"	"1201.69897"	"-0.77"	"-0.00046"	"6/62"	"6"	"62"	"393533.481384277"	"HCD"	"MS2"	"51.61189"	"22.1"	"100.000"	"80.6902"	"27761"	"27761"	"27739"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.0"	""	"31.6"	""	"27.5"	""	"31.6"	""	"42.3"	"46.5"	""	"733"	"12"	"35.000"	"28.000"	"2.09929745356306"	"19"	"0.006505"	"0.07323"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLEEIER"	"[K].aLLEEIER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"601.35266"	"1201.69805"	"1201.69897"	"-0.77"	"-0.00046"	"11/62"	"11"	"62"	"1640176.86688232"	"HCD"	"MS2"	"5.20366"	"75.0"	"100.000"	"80.4523"	"27663"	"27663"	"27645"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"113.1"	""	"106.2"	""	"114.0"	""	"95.1"	""	"123.5"	"164.4"	""	"733"	"42"	"35.000"	"28.000"	"0.00243261835302299"	"23"	"0"	"0.003197"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLEEIER"	"[K].aLLEEIER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"601.35297"	"1201.69866"	"1201.69897"	"-0.26"	"-0.00016"	"12/62"	"12"	"62"	"1929689.80834961"	"HCD"	"MS2"	"10.07314"	"85.4"	"100.000"	"80.1366"	"27535"	"27535"	"27527"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"145.3"	""	"126.5"	""	"121.5"	""	"99.5"	""	"138.5"	"183.1"	""	"734"	"45"	"35.000"	"28.000"	"0.00112892753100984"	"24"	"0"	"0.001993"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSAEAALAR"	"[R].aLSAEAALAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O70467"	"Protein arginine N-methyltransferase 3 OS=Rattus norvegicus OX=10116 GN=Prmt3 PE=1 SV=1"	"O70467"	"Protein arginine N-methyltransferase 3 OS=Rattus norvegicus OX=10116 GN=Prmt3 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"601.35858"	"1201.70989"	"1201.71020"	"-0.26"	"-0.00016"	"8/76"	"8"	"76"	"490416.182067871"	"HCD"	"MS2"	"46.21729"	"31.4"	"100.000"	"56.2342"	"17864"	"17864"	"17835"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.6"	""	"40.7"	""	"40.7"	""	"54.7"	"0.2"	"64.9"	"55.4"	""	"652"	"22"	"35.000"	"28.000"	"0.213903356814747"	"21"	"0"	"0.003542"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTALAELVK"	"[K].QTALAELVk.[H]"	"K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"601.37067"	"1201.73406"	"1201.73535"	"-1.08"	"-0.00065"	"8/88"	"8"	"88"	"1718165.55834961"	"HCD"	"MS2"	"19.48532"	"61.3"	"100.000"	"67.6447"	"22468"	"22468"	"22446"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"94.2"	""	"83.3"	""	"80.0"	""	"88.6"	""	"124.5"	"114.6"	""	"723"	"65"	"35.000"	"28.000"	"1.11971707666679E-05"	"27"	"0"	"0.0005265"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTALAELVK"	"[K].QTALAELVk.[H]"	"K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8308"	"0.0000"	"1"	"1"	"1"	"601.37103"	"1201.73479"	"1201.73535"	"-0.47"	"-0.00028"	"8/88"	"8"	"88"	"1945139.2265625"	"HCD"	"MS2"	"17.47525"	"67.6"	"100.000"	"67.5488"	"22444"	"22444"	"22424"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"97.5"	""	"94.9"	""	"80.6"	""	"94.8"	"0.6"	"139.9"	"133.4"	""	"559"	"65"	"34.000"	"27.000"	"9.80351487697429E-06"	""	"0.0001301"	"0.004436"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLQELDLR"	"[K].sLQELDLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q03238"	"Granzyme M (Fragment) OS=Rattus norvegicus OX=10116 GN=Gzmm PE=1 SV=1"	"Q03238"	"Granzyme M (Fragment) OS=Rattus norvegicus OX=10116 GN=Gzmm PE=1 SV=1"	"0"	"2"	"2"	"0.4138"	"0.0000"	"1"	"1"	"1"	"601.85010"	"1202.69292"	"1202.69422"	"-1.08"	"-0.00065"	"5/76"	"5"	"76"	"1576212.53869629"	"HCD"	"MS2"	"41.46791"	"73.4"	"100.000"	"69.8053"	"23363"	"23363"	"23342"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"106.9"	""	"94.9"	""	"109.0"	""	"113.0"	""	"141.8"	"134.5"	""	"863"	"29"	"36.000"	"29.000"	"0.0503478349761805"	""	"0.0002479"	"0.005805"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEVATLDGR"	"[R].iEVATLDGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"601.85046"	"1202.69365"	"1202.69422"	"-0.47"	"-0.00028"	"6/74"	"6"	"74"	"441226.382385254"	"HCD"	"MS2"	"45.62624"	"25.0"	"100.000"	"64.5013"	"21207"	"21207"	"21183"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.2"	""	"30.8"	""	"33.1"	""	"42.9"	""	"48.3"	"49.0"	""	"803"	"26"	"36.000"	"29.000"	"0.0943377577570596"	"17"	"0.003449"	"0.03307"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLDAIELSR"	"[K].gLDAIELSR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"601.85052"	"1202.69377"	"1202.69422"	"-0.37"	"-0.00022"	"13/74"	"13"	"74"	"1271697.55480957"	"HCD"	"MS2"	"5.61934"	"61.2"	"100.000"	"70.1096"	"23487"	"23487"	"23469"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.4"	""	"74.6"	""	"74.4"	""	"110.1"	""	"112.3"	"118.4"	""	"804"	"31"	"36.000"	"29.000"	"0.0323017501118618"	"24"	"0"	"0.0007146"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLDAIELSR"	"[K].gLDAIELSR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"601.85083"	"1202.69438"	"1202.69422"	"0.14"	"0.00008"	"7/74"	"7"	"74"	"1258935.59301758"	"HCD"	"MS2"	"3.425056"	"61.3"	"100.000"	"70.2451"	"23528"	"23528"	"23509"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"89.2"	""	"71.9"	""	"74.8"	""	"108.2"	"0.9"	"116.6"	"120.0"	""	"804"	"28"	"36.000"	"29.000"	"0.0635661711786694"	"25"	"0"	"0.001335"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEVATLDGR"	"[R].iEVATLDGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"601.85114"	"1202.69499"	"1202.69422"	"0.65"	"0.00039"	"5/74"	"5"	"74"	"563657.670776367"	"HCD"	"MS2"	"53.48145"	"31.7"	"100.000"	"64.1761"	"21075"	"21075"	"21049"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.8"	""	"42.2"	""	"49.2"	""	"48.5"	""	"71.1"	"54.2"	""	"802"	"33"	"36.000"	"29.000"	"0.0181194233694344"	"24"	"0.001886"	"0.02173"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEVATLDGR"	"[R].iEVATLDGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"601.85120"	"1202.69512"	"1202.69422"	"0.75"	"0.00045"	"7/74"	"7"	"74"	"631528.008911133"	"HCD"	"MS2"	"41.78683"	"34.7"	"100.000"	"64.3319"	"21124"	"21124"	"21099"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.3"	""	"42.5"	""	"54.5"	""	"59.9"	""	"64.6"	"63.5"	""	"802"	"44"	"36.000"	"29.000"	"0.00153866605442404"	"27"	"0"	"0.0004305"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLQELDLR"	"[K].sLQELDLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q03238"	"Granzyme M (Fragment) OS=Rattus norvegicus OX=10116 GN=Gzmm PE=1 SV=1"	"Q03238"	"Granzyme M (Fragment) OS=Rattus norvegicus OX=10116 GN=Gzmm PE=1 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"601.85126"	"1202.69524"	"1202.69422"	"0.85"	"0.00051"	"5/76"	"5"	"76"	"1501093.9854126"	"HCD"	"MS2"	"42.60528"	"70.8"	"100.000"	"69.9407"	"23404"	"23404"	"23385"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"107.2"	""	"95.6"	""	"103.0"	""	"104.0"	""	"141.9"	"123.5"	""	"802"	"32"	"36.000"	"29.000"	"0.0232886531426046"	""	"0"	"0.003549"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESITGTLPR"	"[K].eSITGTLPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P14272"	"Plasma kallikrein OS=Rattus norvegicus OX=10116 GN=Klkb1 PE=1 SV=1"	"P14272"	"Plasma kallikrein OS=Rattus norvegicus OX=10116 GN=Klkb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"601.85199"	"1202.69670"	"1202.69422"	"2.07"	"0.00124"	"6/74"	"6"	"74"	"3132839.70849609"	"HCD"	"MS2"	"25.23253"	"147.1"	"100.000"	"50.8563"	"15686"	"15686"	"15667"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"199.7"	""	"223.2"	""	"160.2"	""	"266.0"	""	"283.1"	"264.0"	""	"883"	"38"	"36.000"	"29.000"	"0.00720992434995349"	"26"	"0"	"0.0009185"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESITGTLPR"	"[K].eSITGTLPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P14272"	"Plasma kallikrein OS=Rattus norvegicus OX=10116 GN=Klkb1 PE=1 SV=1"	"P14272"	"Plasma kallikrein OS=Rattus norvegicus OX=10116 GN=Klkb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"601.85205"	"1202.69682"	"1202.69422"	"2.17"	"0.00130"	"8/74"	"8"	"74"	"3866181.59246826"	"HCD"	"MS2"	"21.88391"	"186.0"	"100.000"	"51.2414"	"15832"	"15832"	"15810"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"226.4"	""	"266.2"	""	"204.5"	""	"335.5"	""	"380.9"	"353.3"	""	"883"	"26"	"36.000"	"29.000"	"0.106397324676513"	"21"	"0.000936"	"0.01288"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPGQVK"	"[K].sEPGQVk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"601.86090"	"1202.71453"	"1202.71451"	"0.01"	"0.00001"	"9/54"	"9"	"54"	"7892798.49127197"	"HCD"	"MS2"	"0"	"484.7"	"100.000"	"28.9742"	"6801"	"6801"	"6788"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"777.9"	""	"683.7"	""	"710.2"	""	"692.6"	""	"828.4"	"903.2"	""	"787"	"27"	"35.000"	"28.000"	"0.0816478469118508"	""	"0.009916"	"0.128"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEGFDTYR"	"[R].sEGFDTYR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P04961"	"Proliferating cell nuclear antigen OS=Rattus norvegicus OX=10116 GN=Pcna PE=1 SV=1"	"P04961"	"Proliferating cell nuclear antigen OS=Rattus norvegicus OX=10116 GN=Pcna PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"602.29529"	"1203.58330"	"1203.58433"	"-0.86"	"-0.00052"	"6/66"	"6"	"66"	"3560702.86584473"	"HCD"	"MS2"	"39.28276"	"207.7"	"100.000"	"41.1186"	"11724"	"11724"	"11709"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"344.1"	""	"260.0"	""	"288.0"	""	"306.4"	"0.2"	"378.9"	"388.9"	""	"366"	"19"	"32.000"	"25.000"	"0.208665711123694"	"14"	"0.001374"	"0.01634"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEGFDTYR"	"[R].sEGFDTYR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P04961"	"Proliferating cell nuclear antigen OS=Rattus norvegicus OX=10116 GN=Pcna PE=1 SV=1"	"P04961"	"Proliferating cell nuclear antigen OS=Rattus norvegicus OX=10116 GN=Pcna PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"602.29578"	"1203.58428"	"1203.58433"	"-0.05"	"-0.00003"	"6/66"	"6"	"66"	"4330562.31158447"	"HCD"	"MS2"	"48.54478"	"250.8"	"100.000"	"41.2734"	"11777"	"11777"	"11763"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"420.8"	""	"304.2"	""	"362.5"	""	"374.4"	""	"449.3"	"463.9"	""	"365"	"19"	"32.000"	"25.000"	"0.215905083919842"	"15"	"0.001374"	"0.01786"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGEEGLNR"	"[K].sLGEEGLNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"602.32922"	"1203.65117"	"1203.65308"	"-1.59"	"-0.00096"	"7/74"	"7"	"74"	"1911832.96032715"	"HCD"	"MS2"	"27.84658"	"116.4"	"100.000"	"39.6717"	"11127"	"11127"	"11101"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"155.6"	""	"137.5"	""	"160.5"	""	"188.6"	""	"234.6"	"228.3"	""	"720"	"39"	"35.000"	"28.000"	"0.00442896757492457"	"24"	"0.0008629"	"0.01056"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGEEGLNR"	"[K].sLGEEGLNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"602.33008"	"1203.65288"	"1203.65308"	"-0.17"	"-0.00010"	"7/74"	"7"	"74"	"2142879.05755615"	"HCD"	"MS2"	"17.51277"	"126.5"	"100.000"	"39.5834"	"11100"	"11100"	"11080"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"174.2"	""	"158.4"	""	"170.1"	""	"191.1"	""	"237.5"	"271.0"	""	"721"	"39"	"35.000"	"28.000"	"0.00504551229787429"	"28"	"0.002056"	"0.02234"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYIHEVAR"	"[K].sYIHEVAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"401.89407"	"1203.66767"	"1203.66834"	"-0.56"	"-0.00022"	"7/64"	"7"	"64"	"3965092.55059814"	"HCD"	"MS2"	"17.12426"	"103.5"	"100.000"	"29.5897"	"7050"	"7050"	"7031"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"111.7"	""	"143.9"	""	"151.5"	""	"154.7"	""	"207.1"	"213.6"	""	"850"	"33"	"36.000"	"29.000"	"0.0227189852743713"	"24"	"0.0006732"	"0.0088"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDEEISR"	"[R].lLDEEISR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91XU1"	"Protein quaking OS=Rattus norvegicus OX=10116 GN=Qki PE=1 SV=2"	"Q91XU1"	"Protein quaking OS=Rattus norvegicus OX=10116 GN=Qki PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"602.34167"	"1203.67607"	"1203.67823"	"-1.79"	"-0.00108"	"10/64"	"10"	"64"	"2784153.94573975"	"HCD"	"MS2"	"32.92287"	"136.1"	"100.000"	"63.6461"	"20859"	"20859"	"20843"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"191.2"	""	"173.7"	""	"187.2"	""	"240.4"	""	"227.2"	"273.2"	""	"841"	"30"	"36.000"	"29.000"	"0.0434276171122667"	"23"	"0.0008629"	"0.01096"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILSEVER"	"[K].eILSEVER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.3947"	"0.0000"	"1"	"1"	"1"	"602.34198"	"1203.67668"	"1203.67823"	"-1.29"	"-0.00078"	"5/68"	"5"	"68"	"1740482.6239624"	"HCD"	"MS2"	"28.09987"	"79.1"	"100.000"	"60.8451"	"19724"	"19724"	"19705"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"115.8"	""	"97.4"	""	"84.9"	""	"149.8"	""	"162.0"	"145.9"	""	"891"	"38"	"36.000"	"29.000"	"0.00779556699782285"	""	"0.0001301"	"0.004204"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDEEISR"	"[R].lLDEEISR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91XU1"	"Protein quaking OS=Rattus norvegicus OX=10116 GN=Qki PE=1 SV=2"	"Q91XU1"	"Protein quaking OS=Rattus norvegicus OX=10116 GN=Qki PE=1 SV=2"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"602.34210"	"1203.67693"	"1203.67823"	"-1.08"	"-0.00065"	"10/64"	"10"	"64"	"2415675.83856201"	"HCD"	"MS2"	"28.66837"	"128.0"	"100.000"	"63.7583"	"20890"	"20890"	"20875"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"181.5"	""	"156.8"	""	"186.1"	""	"216.6"	"1.1"	"222.8"	"247.5"	""	"891"	"31"	"36.000"	"29.000"	"0.0335619903643371"	"24"	"0.0006732"	"0.008369"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILSEVER"	"[K].eILSEVER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.3947"	"0.0000"	"1"	"1"	"1"	"602.34216"	"1203.67705"	"1203.67823"	"-0.98"	"-0.00059"	"5/68"	"5"	"68"	"2276720.10418701"	"HCD"	"MS2"	"2.453393"	"101.0"	"100.000"	"61.3282"	"19906"	"19906"	"19889"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"140.7"	""	"124.4"	""	"112.0"	""	"174.2"	"0.3"	"217.3"	"189.5"	""	"891"	"38"	"36.000"	"29.000"	"0.00739345967263434"	""	"0.0003538"	"0.00654"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILSEVER"	"[K].eILSEVER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"602.34235"	"1203.67742"	"1203.67823"	"-0.68"	"-0.00041"	"6/68"	"6"	"68"	"1591616.06335449"	"HCD"	"MS2"	"37.28505"	"72.2"	"100.000"	"61.0125"	"19777"	"19777"	"19750"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"111.0"	""	"80.2"	""	"84.6"	""	"122.2"	""	"155.7"	"136.2"	""	"822"	"39"	"36.000"	"29.000"	"0.00495269771492809"	""	"0"	"0.002743"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDEEISR"	"[R].lLDEEISR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91XU1"	"Protein quaking OS=Rattus norvegicus OX=10116 GN=Qki PE=1 SV=2"	"Q91XU1"	"Protein quaking OS=Rattus norvegicus OX=10116 GN=Qki PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"602.34247"	"1203.67766"	"1203.67823"	"-0.48"	"-0.00029"	"6/64"	"6"	"64"	"1774245.19445801"	"HCD"	"MS2"	"0"	"73.4"	"100.000"	"63.9387"	"20978"	"20978"	"20964"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"85.0"	""	"85.9"	""	"90.2"	""	"134.1"	""	"161.0"	"141.7"	""	"823"	"28"	"36.000"	"29.000"	"0.0695616443371203"	"26"	"0.001211"	"0.01492"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDEEISR"	"[R].lLDEEISR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91XU1"	"Protein quaking OS=Rattus norvegicus OX=10116 GN=Qki PE=1 SV=2"	"Q91XU1"	"Protein quaking OS=Rattus norvegicus OX=10116 GN=Qki PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"602.34247"	"1203.67766"	"1203.67823"	"-0.48"	"-0.00029"	"7/64"	"7"	"64"	"1585351.72076416"	"HCD"	"MS2"	"6.071428"	"67.2"	"100.000"	"64.0694"	"21017"	"21017"	"20999"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"84.4"	""	"84.8"	""	"81.7"	""	"120.4"	"1.6"	"135.9"	"129.0"	""	"823"	"22"	"36.000"	"29.000"	"0.249097769961235"	"23"	"0.000936"	"0.01223"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILSEVER"	"[K].eILSEVER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"602.34271"	"1203.67815"	"1203.67823"	"-0.07"	"-0.00004"	"5/68"	"5"	"68"	"2601483.46813965"	"HCD"	"MS2"	"0"	"111.3"	"100.000"	"61.1353"	"19843"	"19843"	"19826"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"161.5"	""	"124.3"	""	"131.9"	""	"200.3"	""	"220.3"	"217.5"	""	"822"	"35"	"36.000"	"29.000"	"0.0131172205844641"	""	"0.0002479"	"0.005617"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSDTVGQR"	"[K].lVSDTVGQR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.1538"	"0.0000"	"1"	"1"	"1"	"602.34741"	"1203.68755"	"1203.68947"	"-1.59"	"-0.00096"	"7/70"	"7"	"70"	"757800.43359375"	"HCD"	"MS2"	"16.79737"	"61.4"	"100.000"	"43.0547"	"12504"	"12504"	"12476"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.9"	""	"70.2"	""	"73.0"	""	"96.5"	""	"126.5"	"137.6"	""	"826"	"13"	"36.000"	"29.000"	"1.88777422310943"	"24"	"0.008437"	"0.1001"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSDTVGQR"	"[K].lVSDTVGQR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"602.34827"	"1203.68926"	"1203.68947"	"-0.17"	"-0.00011"	"8/70"	"8"	"70"	"2738137.3815918"	"HCD"	"MS2"	"33.96297"	"147.0"	"100.000"	"42.5783"	"12320"	"12320"	"12298"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"204.3"	""	"184.3"	""	"217.5"	""	"226.7"	""	"269.9"	"294.0"	""	"776"	"31"	"35.000"	"28.000"	"0.0283681964391566"	"20"	"0"	"0.001855"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLAEINASR"	"[R].tLAEINASR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"0"	"2"	"2"	"0.6591"	"0.0000"	"1"	"1"	"1"	"602.34827"	"1203.68926"	"1203.68947"	"-0.17"	"-0.00011"	"7/84"	"7"	"84"	"5574193.24902344"	"HCD"	"MS2"	"40.08025"	"308.7"	"100.000"	"45.5075"	"13508"	"13508"	"13491"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"407.9"	""	"387.6"	""	"395.0"	""	"533.9"	"0.0"	"610.6"	"592.7"	""	"776"	"44"	"35.000"	"28.000"	"0.00145154908249557"	""	"0"	"0.0003661"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLAEINASR"	"[R].tLAEINASR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"602.34857"	"1203.68987"	"1203.68947"	"0.33"	"0.00020"	"7/84"	"7"	"84"	"4029436.44744873"	"HCD"	"MS2"	"10.48694"	"192.6"	"100.000"	"45.8802"	"13647"	"13647"	"13629"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"240.2"	""	"219.1"	""	"243.5"	""	"334.3"	""	"407.5"	"389.3"	""	"773"	"50"	"35.000"	"28.000"	"0.000393685571482916"	""	"0"	"0.0004281"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSDTVGQR"	"[K].lVSDTVGQR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"602.34863"	"1203.68999"	"1203.68947"	"0.43"	"0.00026"	"8/70"	"8"	"70"	"2825445.64355469"	"HCD"	"MS2"	"35.75186"	"145.1"	"100.000"	"42.7006"	"12359"	"12359"	"12338"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"204.8"	""	"176.6"	""	"196.8"	""	"216.4"	""	"264.8"	"317.6"	""	"773"	"30"	"35.000"	"28.000"	"0.0432662741960054"	"20"	"0"	"0.001933"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLAEINASR"	"[R].tLAEINASR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"0"	"2"	"2"	"0.6222"	"0.0000"	"1"	"1"	"1"	"602.34863"	"1203.68999"	"1203.68947"	"0.43"	"0.00026"	"7/84"	"7"	"84"	"2174147.71234131"	"HCD"	"MS2"	"11.12922"	"110.0"	"100.000"	"45.8115"	"13631"	"13631"	"13611"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"144.3"	""	"134.7"	""	"150.1"	""	"189.5"	""	"212.3"	"214.0"	""	"773"	"45"	"35.000"	"28.000"	"0.00134013792699904"	""	"0"	"0.0006303"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLAEINASR"	"[R].tLAEINASR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"602.34882"	"1203.69036"	"1203.68947"	"0.74"	"0.00044"	"7/84"	"7"	"84"	"3408550.70178223"	"HCD"	"MS2"	"52.84703"	"212.5"	"100.000"	"45.5742"	"13523"	"13523"	"13505"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"280.7"	""	"255.9"	""	"256.2"	""	"365.1"	""	"440.4"	"421.9"	""	"774"	"25"	"35.000"	"28.000"	"0.130530188450982"	""	"0"	"0.001566"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNGVVDK"	"[R].nNGVVDk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"602.35840"	"1203.70952"	"1203.70976"	"-0.20"	"-0.00012"	"6/60"	"6"	"60"	"2780105.07855225"	"HCD"	"MS2"	"18.53478"	"220.6"	"100.000"	"31.6564"	"7887"	"7887"	"7868"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"372.3"	""	"292.1"	""	"313.4"	""	"320.7"	"2.8"	"382.5"	"403.5"	""	"747"	"33"	"35.000"	"28.000"	"0.018979755179637"	"23"	"0.003449"	"0.03386"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEQINK"	"[R].gGEQINk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"602.35852"	"1203.70976"	"1203.70976"	"0.01"	"0.00000"	"6/54"	"6"	"54"	"2518429.17193604"	"HCD"	"MS2"	"9.776659"	"219.7"	"100.000"	"30.5060"	"7411"	"7411"	"7386"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"334.9"	""	"209.0"	""	"226.6"	""	"419.6"	"5.6"	"442.6"	"447.1"	""	"740"	"32"	"35.000"	"28.000"	"0.0210475584412221"	"28"	"0.00413"	"0.04541"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNGVVDK"	"[R].nNGVVDk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"602.35889"	"1203.71050"	"1203.70976"	"0.61"	"0.00037"	"6/60"	"6"	"60"	"2884621.09088135"	"HCD"	"MS2"	"21.83014"	"235.5"	"100.000"	"31.6802"	"7887"	"7887"	"7869"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"396.4"	""	"305.3"	""	"340.3"	""	"338.3"	""	"398.0"	"451.4"	""	"740"	"26"	"35.000"	"28.000"	"0.0863379483043971"	"22"	"0.005001"	"0.05651"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVESVPK"	"[K].sVESVPk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"602.37030"	"1203.73332"	"1203.73491"	"-1.32"	"-0.00079"	"6/54"	"6"	"54"	"6236036.97631836"	"HCD"	"MS2"	"6.823298"	"438.5"	"100.000"	"41.0624"	"11693"	"11693"	"11685"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"668.2"	""	"567.1"	""	"598.5"	""	"737.0"	"0.8"	"790.7"	"790.4"	""	"565"	"34"	"34.000"	"27.000"	"0.0104958702219951"	"25"	"0.00387"	"0.03922"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVESVPK"	"[K].sVESVPk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"602.37042"	"1203.73357"	"1203.73491"	"-1.11"	"-0.00067"	"6/54"	"6"	"54"	"6892806.01397705"	"HCD"	"MS2"	"0"	"456.9"	"100.000"	"40.8985"	"11635"	"11635"	"11625"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"682.2"	""	"571.7"	""	"630.4"	""	"770.4"	""	"832.5"	"843.2"	""	"565"	"33"	"34.000"	"27.000"	"0.0139642769073781"	"22"	"0.004022"	"0.04367"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQAENIMR"	"[R].nQAENIMR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"602.81812"	"1204.62895"	"1204.63057"	"-1.34"	"-0.00081"	"6/70"	"6"	"70"	"8877421.01416016"	"HCD"	"MS2"	"31.66087"	"481.5"	"100.000"	"32.5496"	"8249"	"8249"	"8227"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"496.5"	""	"515.5"	""	"500.4"	""	"797.0"	""	"1153.6"	"1130.7"	""	"709"	"35"	"35.000"	"28.000"	"0.0120674703249005"	"21"	"0.0003538"	"0.006834"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQAENIMR"	"[R].nQAENIMR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"602.81854"	"1204.62981"	"1204.63057"	"-0.63"	"-0.00038"	"6/70"	"6"	"70"	"8258668.45825195"	"HCD"	"MS2"	"15.44825"	"469.5"	"100.000"	"32.5959"	"8261"	"8261"	"8243"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"457.8"	""	"437.9"	""	"459.6"	""	"792.4"	"1.7"	"1200.2"	"1127.0"	""	"702"	"34"	"35.000"	"28.000"	"0.0151812354693288"	"20"	"0.0006732"	"0.008375"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQAENIMR"	"[R].nQAENIMR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"602.81860"	"1204.62993"	"1204.63057"	"-0.53"	"-0.00032"	"6/70"	"6"	"70"	"3422186.47546387"	"HCD"	"MS2"	"11.17455"	"193.1"	"100.000"	"32.8788"	"8376"	"8376"	"8360"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"208.3"	""	"187.9"	""	"185.0"	""	"341.9"	""	"461.3"	"454.8"	""	"702"	"26"	"35.000"	"28.000"	"0.0834270940605332"	"21"	"0.001374"	"0.0181"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQAENIMR"	"[R].nQAENIMR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"602.81891"	"1204.63054"	"1204.63057"	"-0.03"	"-0.00002"	"6/70"	"6"	"70"	"3826291.54370117"	"HCD"	"MS2"	"3.174128"	"217.9"	"100.000"	"32.8418"	"8367"	"8367"	"8350"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"223.9"	""	"196.5"	""	"199.5"	""	"381.1"	""	"557.5"	"520.8"	""	"702"	"36"	"35.000"	"28.000"	"0.00904288726107904"	"22"	"0.0006732"	"0.008743"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLQTSQDAR"	"[K].gLQTSQDAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"602.82739"	"1204.64751"	"1204.64833"	"-0.68"	"-0.00041"	"6/82"	"6"	"82"	"5437372.08764648"	"HCD"	"MS2"	"0"	"239.0"	"100.000"	"23.6589"	"4658"	"4658"	"4634"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"435.4"	""	"215.1"	""	"280.1"	""	"426.5"	""	"452.3"	"456.2"	""	"803"	"44"	"36.000"	"29.000"	"0.00174054617672593"	"26"	"0"	"0.0004888"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLQTSQDAR"	"[K].gLQTSQDAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.6596"	"0.0000"	"1"	"1"	"1"	"602.82751"	"1204.64775"	"1204.64833"	"-0.48"	"-0.00029"	"6/82"	"6"	"82"	"3303096.534729"	"HCD"	"MS2"	"0"	"155.7"	"100.000"	"23.7095"	"4661"	"4661"	"4640"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"270.6"	""	"152.7"	""	"183.4"	""	"269.4"	"0.3"	"306.4"	"292.8"	""	"821"	"47"	"36.000"	"29.000"	"0.000896010628811552"	""	"0"	"0.0003272"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SSLDGDIIR"	"[K].sSLDGDIIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P97629"	"Leucyl-cystinyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lnpep PE=1 SV=1"	"P97629"	"Leucyl-cystinyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lnpep PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"602.83966"	"1204.67204"	"1204.67348"	"-1.19"	"-0.00072"	"8/74"	"8"	"74"	"784292.954345703"	"HCD"	"MS2"	"100"	"56.3"	"100.000"	"56.2710"	"17879"	"17879"	"17851"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.0"	""	"63.1"	""	"65.0"	""	"108.9"	""	"121.2"	"120.9"	""	"903"	"15"	"36.000"	"29.000"	"1.58364471089584"	"22"	"0.0005778"	"0.008074"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSLDGDIIR"	"[K].sSLDGDIIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P97629"	"Leucyl-cystinyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lnpep PE=1 SV=1"	"P97629"	"Leucyl-cystinyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lnpep PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"602.83978"	"1204.67229"	"1204.67348"	"-0.99"	"-0.00060"	"13/74"	"13"	"74"	"2209920.17468262"	"HCD"	"MS2"	"1.505106"	"107.0"	"100.000"	"56.5866"	"18007"	"18007"	"17988"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"135.9"	""	"137.5"	""	"130.1"	""	"175.3"	"0.3"	"213.7"	"222.9"	""	"903"	"30"	"36.000"	"29.000"	"0.0497344998257949"	"23"	"0"	"0.001937"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSLDGDIIR"	"[K].sSLDGDIIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P97629"	"Leucyl-cystinyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lnpep PE=1 SV=1"	"P97629"	"Leucyl-cystinyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lnpep PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"602.83984"	"1204.67241"	"1204.67348"	"-0.89"	"-0.00054"	"8/74"	"8"	"74"	"1063821.02978516"	"HCD"	"MS2"	"36.5192"	"63.9"	"100.000"	"56.1169"	"17830"	"17830"	"17805"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"77.2"	""	"76.0"	""	"87.1"	""	"101.8"	""	"129.4"	"140.5"	""	"835"	"20"	"36.000"	"29.000"	"0.402398617363008"	"24"	"0.0004639"	"0.007743"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDADVLSR"	"[R].tVDADVLSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIA1"	"Nicalin OS=Rattus norvegicus OX=10116 GN=Ncln PE=2 SV=1"	"Q5XIA1"	"Nicalin OS=Rattus norvegicus OX=10116 GN=Ncln PE=2 SV=1"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"602.83997"	"1204.67266"	"1204.67348"	"-0.69"	"-0.00041"	"7/78"	"7"	"78"	"1437736.80078125"	"HCD"	"MS2"	"35.09883"	"88.8"	"100.000"	"52.5707"	"16386"	"16386"	"16360"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.7"	""	"89.5"	""	"122.4"	""	"148.9"	""	"166.8"	"213.9"	""	"829"	"37"	"36.000"	"29.000"	"0.00750800468390825"	"29"	"0"	"0.0007106"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDADVLSR"	"[R].tVDADVLSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIA1"	"Nicalin OS=Rattus norvegicus OX=10116 GN=Ncln PE=2 SV=1"	"Q5XIA1"	"Nicalin OS=Rattus norvegicus OX=10116 GN=Ncln PE=2 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"602.84021"	"1204.67314"	"1204.67348"	"-0.28"	"-0.00017"	"7/78"	"7"	"78"	"1726404.44024658"	"HCD"	"MS2"	"4.558185"	"88.2"	"100.000"	"52.9352"	"16523"	"16523"	"16501"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.6"	""	"95.3"	""	"116.6"	""	"165.1"	""	"177.3"	"196.8"	""	"835"	"49"	"36.000"	"29.000"	"0.000551640927272896"	"29"	"0"	"0.0005325"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITSLQER"	"[R].eITSLQER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"602.84039"	"1204.67351"	"1204.67348"	"0.02"	"0.00001"	"6/72"	"6"	"72"	"1475776.77685547"	"HCD"	"MS2"	"48.90298"	"104.2"	"100.000"	"42.3074"	"12199"	"12199"	"12175"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"156.9"	""	"120.1"	""	"128.1"	""	"160.0"	""	"216.9"	"208.7"	""	"831"	"24"	"36.000"	"29.000"	"0.185170171209163"	"24"	"0.000936"	"0.01225"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITSLQER"	"[R].eITSLQER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"602.84082"	"1204.67436"	"1204.67348"	"0.73"	"0.00044"	"6/72"	"6"	"72"	"1480444.01849365"	"HCD"	"MS2"	"44.89077"	"101.9"	"100.000"	"42.1966"	"12164"	"12164"	"12140"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"148.9"	""	"126.3"	""	"124.8"	""	"167.9"	"1.5"	"193.6"	"203.5"	""	"830"	"24"	"36.000"	"29.000"	"0.179080416883523"	"23"	"0.001211"	"0.01446"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLEPSFR"	"[K].qVLEPSFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"602.84772"	"1204.68816"	"1204.68874"	"-0.48"	"-0.00029"	"6/74"	"6"	"74"	"1738509.39141846"	"HCD"	"MS2"	"42.33028"	"87.4"	"100.000"	"59.1176"	"19039"	"19039"	"19016"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.6"	""	"105.1"	""	"106.9"	""	"153.5"	"1.1"	"166.5"	"169.5"	""	"761"	"35"	"35.000"	"28.000"	"0.0122844201331166"	"21"	"0"	"0.003238"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLEPSFR"	"[K].qVLEPSFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"602.84772"	"1204.68816"	"1204.68874"	"-0.48"	"-0.00029"	"8/74"	"8"	"74"	"2720226.01483154"	"HCD"	"MS2"	"43.20826"	"126.3"	"100.000"	"59.4193"	"19162"	"19162"	"19142"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"171.7"	""	"146.6"	""	"157.8"	""	"206.2"	""	"257.0"	"262.6"	""	"761"	"20"	"35.000"	"28.000"	"0.373555092319104"	"18"	"0.001211"	"0.01452"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLEPSFR"	"[K].qVLEPSFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"602.84772"	"1204.68816"	"1204.68874"	"-0.48"	"-0.00029"	"8/74"	"8"	"74"	"2809040.13378906"	"HCD"	"MS2"	"45.92269"	"138.1"	"100.000"	"59.2007"	"19088"	"19088"	"19069"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"183.9"	""	"162.3"	""	"176.8"	""	"228.5"	""	"273.8"	"287.8"	""	"761"	"18"	"35.000"	"28.000"	"0.543694151213474"	"18"	"0.000936"	"0.01231"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLEPSFR"	"[K].qVLEPSFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"602.84821"	"1204.68913"	"1204.68874"	"0.33"	"0.00020"	"6/74"	"6"	"74"	"1921785.67523193"	"HCD"	"MS2"	"43.28905"	"96.3"	"100.000"	"58.9038"	"18967"	"18967"	"18943"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"141.3"	""	"113.2"	""	"120.4"	""	"173.8"	""	"175.0"	"190.6"	""	"750"	"35"	"35.000"	"28.000"	"0.0106421963566558"	"21"	"0"	"0.002964"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVANDAK"	"[R].eVANDAk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"602.85016"	"1204.69304"	"1204.69377"	"-0.61"	"-0.00037"	"6/62"	"6"	"62"	"2154835.6159668"	"HCD"	"MS2"	"5.352711"	"162.1"	"100.000"	"28.4123"	"6559"	"6559"	"6537"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"192.3"	""	"153.8"	""	"150.1"	""	"291.9"	""	"366.2"	"391.2"	""	"743"	"36"	"35.000"	"28.000"	"0.00835523786067993"	"22"	"0.002467"	"0.02493"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVANDAK"	"[R].eVANDAk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"602.85022"	"1204.69316"	"1204.69377"	"-0.51"	"-0.00031"	"6/62"	"6"	"62"	"1473593.90759277"	"HCD"	"MS2"	"0"	"121.4"	"100.000"	"28.3776"	"6559"	"6559"	"6534"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"144.7"	""	"112.9"	""	"117.2"	""	"207.1"	""	"281.3"	"294.9"	""	"755"	"35"	"35.000"	"28.000"	"0.0118827498857325"	"23"	"0.002547"	"0.02537"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVANDAK"	"[R].eVANDAk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"602.85040"	"1204.69353"	"1204.69377"	"-0.20"	"-0.00012"	"12/62"	"12"	"62"	"2588570.44622803"	"HCD"	"MS2"	"0"	"206.6"	"100.000"	"28.0404"	"6422"	"6422"	"6404"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"266.3"	""	"211.4"	""	"188.3"	""	"385.7"	""	"453.2"	"465.4"	""	"762"	"42"	"35.000"	"28.000"	"0.00231166541573221"	"28"	"0.001812"	"0.02057"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVANDAK"	"[R].eVANDAk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"0"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"602.85107"	"1204.69487"	"1204.69377"	"0.91"	"0.00055"	"6/62"	"6"	"62"	"2581514.10314941"	"HCD"	"MS2"	"0"	"200.2"	"100.000"	"28.1047"	"6434"	"6434"	"6417"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"253.7"	""	"192.8"	""	"186.8"	""	"370.5"	""	"442.6"	"458.3"	""	"763"	"37"	"35.000"	"28.000"	"0.00832711461368105"	""	"0.002973"	"0.02825"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATGTATPK"	"[K].aTGTATPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"1"	"602.86823"	"1204.72917"	"1204.73016"	"-0.82"	"-0.00049"	"7/64"	"7"	"64"	"1082582.0211792"	"HCD"	"MS2"	"0"	"84.5"	"100.000"	"26.3765"	"5747"	"5747"	"5729"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"99.7"	""	"110.8"	"2.4"	"136.9"	""	"140.3"	"4.5"	"168.8"	"137.6"	""	"455"	"18"	"33.000"	"26.000"	"0.34117830007679"	""	"0.001211"	"0.01501"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"402.54050"	"1205.60694"	"1205.61122"	"-3.55"	"-0.00143"	"11/74"	"11"	"74"	"2434877.51599121"	"HCD"	"MS2"	"45.85292"	"93.0"	"100.000"	"36.3841"	"9795"	"9795"	"9776"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"122.2"	""	"112.8"	""	"119.1"	""	"163.9"	""	"186.3"	"179.0"	""	"535"	"36"	"34.000"	"27.000"	"0.00668842384253795"	"23"	"0"	"0.001913"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"402.54059"	"1205.60721"	"1205.61122"	"-3.32"	"-0.00133"	"12/74"	"12"	"74"	"2754469.86297607"	"HCD"	"MS2"	"39.14245"	"101.8"	"100.000"	"36.2246"	"9737"	"9737"	"9720"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"152.4"	""	"122.2"	""	"124.9"	""	"160.3"	"0.4"	"211.1"	"194.4"	""	"520"	"40"	"34.000"	"27.000"	"0.00240421525223937"	"27"	"0"	"0.0005775"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7627"	"0.0000"	"1"	"1"	"1"	"402.54153"	"1205.61005"	"1205.61122"	"-0.97"	"-0.00039"	"7/74"	"7"	"74"	"6847405.65563965"	"HCD"	"MS2"	"35.60526"	"142.0"	"100.000"	"36.0219"	"9650"	"9650"	"9627"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"202.9"	""	"180.8"	""	"178.0"	""	"228.2"	""	"255.0"	"305.2"	""	"552"	"59"	"34.000"	"27.000"	"3.36441129303263E-05"	""	"0"	"0.0003559"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"402.54160"	"1205.61023"	"1205.61122"	"-0.82"	"-0.00033"	"8/74"	"8"	"74"	"8024031.97753906"	"HCD"	"MS2"	"19.8733"	"157.5"	"100.000"	"35.9262"	"9616"	"9616"	"9594"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"224.6"	""	"205.7"	""	"210.8"	""	"252.7"	""	"304.9"	"294.8"	""	"552"	"62"	"34.000"	"27.000"	"1.70965736721192E-05"	""	"0"	"0.000282"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"603.30890"	"1205.61052"	"1205.61122"	"-0.58"	"-0.00035"	"6/74"	"6"	"74"	"1245188.48376465"	"HCD"	"MS2"	"53.08494"	"102.1"	"100.000"	"39.2573"	"10967"	"10967"	"10946"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"120.4"	""	"106.0"	""	"119.6"	""	"162.0"	""	"246.7"	"216.9"	""	"551"	"23"	"34.000"	"27.000"	"0.141619026010958"	"20"	"0.000936"	"0.0122"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7843"	"0.0000"	"1"	"1"	"1"	"603.30914"	"1205.61101"	"1205.61122"	"-0.17"	"-0.00010"	"7/74"	"7"	"74"	"4043621.05303955"	"HCD"	"MS2"	"3.794902"	"146.2"	"100.000"	"36.7714"	"9959"	"9959"	"9939"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"204.5"	""	"180.8"	""	"184.6"	""	"215.2"	""	"310.4"	"295.5"	""	"559"	"51"	"34.000"	"27.000"	"0.000206244232321084"	"27"	"0"	"6.799E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"603.30920"	"1205.61113"	"1205.61122"	"-0.07"	"-0.00004"	"8/74"	"8"	"74"	"10747436.7592163"	"HCD"	"MS2"	"12.6912"	"453.4"	"100.000"	"36.4772"	"9840"	"9840"	"9825"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"617.3"	""	"582.4"	""	"564.9"	""	"691.3"	""	"879.7"	"970.6"	""	"559"	"50"	"34.000"	"27.000"	"0.000304355961086695"	"26"	"0"	"7.698E-05"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"603.30945"	"1205.61162"	"1205.61122"	"0.33"	"0.00020"	"8/74"	"8"	"74"	"1239437.0222168"	"HCD"	"MS2"	"30.99749"	"84.8"	"100.000"	"37.8913"	"10410"	"10410"	"10388"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.7"	""	"100.6"	""	"97.4"	""	"123.1"	""	"160.9"	"219.8"	""	"557"	"50"	"34.000"	"27.000"	"0.000304666848006778"	""	"0"	"0.0002409"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"603.30957"	"1205.61186"	"1205.61122"	"0.54"	"0.00032"	"8/74"	"8"	"74"	"12337473.3634644"	"HCD"	"MS2"	"15.5371"	"523.4"	"99.018"	"36.5932"	"9881"	"9881"	"9864"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"700.7"	""	"642.4"	""	"625.0"	""	"853.2"	""	"1009.2"	"1137.4"	""	"556"	"48"	"34.000"	"27.000"	"0.000420770027065265"	""	"0"	"9.13E-05"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"603.30969"	"1205.61211"	"1205.61122"	"0.74"	"0.00045"	"7/74"	"7"	"74"	"3931410.50909424"	"HCD"	"MS2"	"3.85411"	"203.5"	"100.000"	"36.9034"	"10007"	"10007"	"9988"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"279.6"	""	"266.9"	""	"265.4"	""	"311.5"	""	"400.3"	"407.1"	""	"555"	"49"	"34.000"	"27.000"	"0.000320821147208308"	"25"	"0"	"6.826E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"603.30994"	"1205.61260"	"1205.61122"	"1.14"	"0.00069"	"8/74"	"8"	"74"	"2899081.74530029"	"HCD"	"MS2"	"53.88041"	"177.6"	"100.000"	"37.5534"	"10270"	"10270"	"10262"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"258.8"	""	"207.3"	""	"212.1"	""	"275.6"	""	"348.7"	"385.8"	""	"575"	"37"	"34.000"	"27.000"	"0.00636264729011621"	"23"	"0"	"0.00287"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"603.30994"	"1205.61260"	"1205.61122"	"1.14"	"0.00069"	"8/74"	"8"	"74"	"2996753.89294434"	"HCD"	"MS2"	"62.38339"	"157.7"	"100.000"	"37.4006"	"10214"	"10214"	"10199"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"214.8"	""	"163.6"	""	"198.1"	""	"254.7"	"0.3"	"324.0"	"342.1"	""	"575"	"31"	"34.000"	"27.000"	"0.0246398380503731"	"24"	"0"	"0.0004169"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"603.31012"	"1205.61296"	"1205.61122"	"1.45"	"0.00087"	"9/74"	"9"	"74"	"214848650.151855"	"HCD"	"MS2"	"0.1236162"	"940.7"	"10.485"	"35.9669"	"9628"	"9628"	"9614"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1370.4"	""	"1223.1"	""	"1207.6"	""	"1442.6"	""	"1722.6"	"1957.9"	""	"571"	"52"	"34.000"	"27.000"	"0.000192134835369173"	""	"0"	"5.323E-05"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7358"	"0.0000"	"1"	"1"	"1"	"603.31018"	"1205.61308"	"1205.61122"	"1.55"	"0.00093"	"9/74"	"9"	"74"	"179698135.151367"	"HCD"	"MS2"	"0.1862401"	"352.0"	"4.624"	"36.1833"	"9721"	"9721"	"9704"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"500.8"	""	"428.3"	""	"442.2"	""	"539.9"	""	"654.9"	"779.0"	""	"577"	"53"	"34.000"	"27.000"	"0.000158908020412959"	""	"0"	"0.0002588"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEIAEMNR"	"[R].nEIAEMNR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.1714"	"0.0000"	"1"	"1"	"1"	"603.31049"	"1205.61370"	"1205.61459"	"-0.74"	"-0.00045"	"6/76"	"6"	"76"	"3028515.34039307"	"HCD"	"MS2"	"27.95802"	"175.1"	"100.000"	"35.5662"	"9469"	"9469"	"9457"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"256.9"	""	"201.4"	""	"233.1"	""	"245.4"	""	"357.3"	"370.7"	""	"569"	"35"	"34.000"	"27.000"	"0.00937739631144868"	""	"0.0003538"	"0.006838"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7358"	"0.0000"	"1"	"1"	"1"	"603.31116"	"1205.61504"	"1205.61122"	"3.17"	"0.00191"	"9/74"	"9"	"74"	"446223800.901367"	"HCD"	"MS2"	"0.0746253"	"772.6"	"4.365"	"35.8735"	"9595"	"9595"	"9578"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1105.2"	""	"978.7"	""	"982.8"	""	"1242.0"	"3.2"	"1385.1"	"1627.5"	""	"569"	"53"	"34.000"	"27.000"	"0.000152785546067337"	""	"0"	"8.72E-05"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEIAEMNR"	"[R].nEIAEMNR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"603.31122"	"1205.61516"	"1205.61459"	"0.47"	"0.00029"	"6/76"	"6"	"76"	"2477100.50170898"	"HCD"	"MS2"	"38.3844"	"147.3"	"100.000"	"35.6778"	"9511"	"9511"	"9487"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"217.5"	""	"173.7"	""	"211.9"	""	"205.8"	""	"286.7"	"301.9"	""	"569"	"36"	"34.000"	"27.000"	"0.00670011521268415"	""	"0.0002479"	"0.005885"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"603.31177"	"1205.61626"	"1205.61122"	"4.18"	"0.00252"	"7/74"	"7"	"74"	"266789706.459961"	"HCD"	"MS2"	"0"	"466.4"	"4.182"	"36.2833"	"9755"	"9755"	"9742"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"696.1"	""	"562.8"	""	"587.7"	""	"707.6"	""	"865.4"	"1005.8"	""	"603"	"52"	"34.000"	"27.000"	"0.000191993849553737"	""	"0"	"0.0001007"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLAEDELR"	"[R].mLAEDELR.[D]"	"N-Term(TMT6plex)"	"1"	"3"	"P61206"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2"	"P61206; P84079; P84082"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1"	"0"	"2"	"2"	"0.3939"	"0.0000"	"1"	"1"	"1"	"603.32086"	"1205.63445"	"1205.63974"	"-4.39"	"-0.00265"	"10/60"	"10"	"60"	"3583773.87078857"	"HCD"	"MS2"	"45.46628"	"168.9"	"100.000"	"59.3506"	"19149"	"19149"	"19126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"222.7"	""	"202.9"	""	"240.7"	""	"247.7"	""	"346.6"	"344.7"	""	"747"	"33"	"35.000"	"28.000"	"0.0172699311492624"	""	"0.0005778"	"0.00812"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLAEDELR"	"[R].mLAEDELR.[D]"	"N-Term(TMT6plex)"	"1"	"3"	"P61206"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2"	"P61206; P84079; P84082"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"603.32196"	"1205.63664"	"1205.63974"	"-2.57"	"-0.00155"	"9/60"	"9"	"60"	"5112968.77929688"	"HCD"	"MS2"	"24.17178"	"228.6"	"100.000"	"59.6196"	"19244"	"19244"	"19222"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"342.5"	""	"308.1"	""	"346.0"	""	"284.0"	""	"473.0"	"429.4"	""	"728"	"46"	"35.000"	"28.000"	"0.00095301861499171"	""	"0.0001301"	"0.004691"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLAEDELR"	"[R].mLAEDELR.[D]"	"N-Term(TMT6plex)"	"1"	"3"	"P61206"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2"	"P61206; P84079; P84082"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"603.32214"	"1205.63701"	"1205.63974"	"-2.26"	"-0.00136"	"6/60"	"6"	"60"	"1529511.28112793"	"HCD"	"MS2"	"0"	"80.2"	"100.000"	"59.8905"	"19348"	"19348"	"19338"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"107.1"	""	"111.7"	""	"106.7"	""	"106.2"	""	"176.6"	"153.2"	""	"725"	"35"	"35.000"	"28.000"	"0.0128324036142745"	""	"0.001374"	"0.01805"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLAEDELR"	"[R].mLAEDELR.[D]"	"N-Term(TMT6plex)"	"1"	"3"	"P61206"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2"	"P61206; P84079; P84082"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1"	"0"	"2"	"2"	"0.4130"	"0.0000"	"1"	"1"	"1"	"603.32257"	"1205.63786"	"1205.63974"	"-1.55"	"-0.00094"	"9/60"	"9"	"60"	"10651313.8695068"	"HCD"	"MS2"	"0"	"471.4"	"99.915"	"59.8924"	"19353"	"19353"	"19348"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"656.7"	""	"646.0"	""	"739.1"	""	"520.9"	""	"1011.0"	"901.1"	""	"727"	"46"	"35.000"	"28.000"	"0.000838502603099746"	""	"0.0004639"	"0.007809"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLAEDELR"	"[R].mLAEDELR.[D]"	"N-Term(TMT6plex)"	"1"	"3"	"P61206"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2"	"P61206; P84079; P84082"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1"	"0"	"2"	"2"	"0.4130"	"0.0000"	"1"	"1"	"1"	"603.32269"	"1205.63811"	"1205.63974"	"-1.35"	"-0.00082"	"9/60"	"9"	"60"	"13865277.7443848"	"HCD"	"MS2"	"0"	"607.9"	"100.000"	"59.6260"	"19260"	"19260"	"19249"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"833.6"	""	"861.8"	""	"997.9"	""	"641.4"	""	"1292.1"	"1145.2"	""	"746"	"46"	"35.000"	"28.000"	"0.00084471232673221"	""	"0.0006732"	"0.008193"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVAGDSK"	"[R].gNVAGDSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"603.34735"	"1205.68743"	"1205.68902"	"-1.32"	"-0.00080"	"7/70"	"7"	"70"	"1762710.11450195"	"HCD"	"MS2"	"27.49035"	"129.2"	"100.000"	"26.2848"	"5710"	"5710"	"5690"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"155.8"	""	"174.5"	""	"175.3"	""	"221.4"	""	"274.3"	"226.2"	""	"768"	"22"	"35.000"	"28.000"	"0.258423036013178"	""	"0.000936"	"0.01298"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVAGDSK"	"[R].gNVAGDSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"603.34753"	"1205.68779"	"1205.68902"	"-1.02"	"-0.00062"	"7/70"	"7"	"70"	"17257777.4440918"	"HCD"	"MS2"	"5.76419"	"1092.6"	"100.000"	"25.6585"	"5456"	"5456"	"5434"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1618.7"	""	"1200.8"	""	"1347.4"	""	"2103.9"	"4.9"	"2090.1"	"1990.8"	""	"741"	"38"	"35.000"	"28.000"	"0.00614876949205617"	"28"	"0.0004639"	"0.007613"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAESNK"	"[K].aQAESNk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.2800"	"0.0000"	"1"	"1"	"1"	"603.34778"	"1205.68828"	"1205.68902"	"-0.62"	"-0.00037"	"10/60"	"10"	"60"	"1181796.51776123"	"HCD"	"MS2"	"19.17072"	"99.0"	"100.000"	"21.6011"	"3803"	"3803"	"3774"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"146.2"	""	"101.4"	""	"111.7"	""	"189.4"	""	"197.7"	"193.0"	""	"737"	"25"	"35.000"	"28.000"	"0.109758330424466"	""	"0.003653"	"0.03772"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGDTQAK"	"[R].qGDTQAk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JJ50"	"Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Rattus norvegicus OX=10116 GN=Hgs PE=1 SV=1"	"Q9JJ50"	"Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Rattus norvegicus OX=10116 GN=Hgs PE=1 SV=1"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"1"	"603.34784"	"1205.68840"	"1205.68902"	"-0.51"	"-0.00031"	"6/62"	"6"	"62"	"973407.284545898"	"HCD"	"MS2"	"29.98628"	"80.1"	"100.000"	"21.4817"	"3772"	"3772"	"3744"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"126.6"	""	"75.0"	""	"87.1"	""	"156.1"	""	"158.9"	"156.7"	""	"761"	"16"	"35.000"	"28.000"	"0.89609625252243"	"27"	"0.008478"	"0.1026"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVAGDSK"	"[R].gNVAGDSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"603.34796"	"1205.68865"	"1205.68902"	"-0.31"	"-0.00019"	"7/70"	"7"	"70"	"25539754.3098755"	"HCD"	"MS2"	"0"	"1698.7"	"100.000"	"25.7690"	"5486"	"5486"	"5467"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2555.2"	""	"1858.3"	""	"2075.1"	""	"3199.4"	""	"3246.9"	"3177.7"	""	"763"	"39"	"35.000"	"28.000"	"0.00493735713513169"	"27"	"0.0002479"	"0.0052"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVAGDSK"	"[R].gNVAGDSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"603.34802"	"1205.68877"	"1205.68902"	"-0.21"	"-0.00013"	"7/70"	"7"	"70"	"6864007.4755249"	"HCD"	"MS2"	"0"	"481.6"	"100.000"	"26.0603"	"5604"	"5604"	"5595"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"670.7"	""	"493.0"	""	"630.5"	""	"852.3"	""	"943.3"	"982.3"	""	"763"	"39"	"35.000"	"28.000"	"0.00498304193822297"	""	"0.0002479"	"0.005665"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVAGDSK"	"[R].gNVAGDSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"603.34808"	"1205.68889"	"1205.68902"	"-0.11"	"-0.00007"	"7/70"	"7"	"70"	"744165.573669434"	"HCD"	"MS2"	"14.65127"	"62.9"	"100.000"	"26.7046"	"5881"	"5881"	"5854"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.8"	""	"61.9"	""	"83.4"	""	"120.5"	""	"112.3"	"130.7"	""	"763"	"36"	"35.000"	"28.000"	"0.009407940071549"	"28"	"0.0001301"	"0.003897"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVAGDSK"	"[R].gNVAGDSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"603.34814"	"1205.68901"	"1205.68902"	"-0.01"	"0.00000"	"10/70"	"10"	"70"	"679999.016479492"	"HCD"	"MS2"	"0"	"57.8"	"100.000"	"26.8039"	"5905"	"5905"	"5880"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"82.0"	""	"71.3"	""	"81.0"	""	"100.2"	""	"103.8"	"111.5"	""	"749"	"32"	"35.000"	"28.000"	"0.0214018749433614"	"23"	"0.0003538"	"0.007323"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVAGDSK"	"[R].gNVAGDSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"603.34814"	"1205.68901"	"1205.68902"	"-0.01"	"0.00000"	"7/70"	"7"	"70"	"9092147.87322998"	"HCD"	"MS2"	"0"	"607.7"	"100.000"	"25.9454"	"5574"	"5574"	"5559"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"850.7"	""	"631.3"	""	"761.0"	""	"1097.4"	""	"1189.4"	"1238.5"	""	"749"	"39"	"35.000"	"28.000"	"0.00481339854148885"	""	"0.0001301"	"0.004485"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"603.36011"	"1205.71294"	"1205.71417"	"-1.02"	"-0.00062"	"5/54"	"5"	"54"	"1885924.38427734"	"HCD"	"MS2"	"34.27155"	"137.0"	"100.000"	"48.9226"	"14899"	"14899"	"14879"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"134.0"	""	"136.9"	""	"151.9"	""	"260.6"	""	"322.5"	"300.7"	""	"622"	"24"	"34.000"	"27.000"	"0.132361106484594"	""	"0.005309"	"0.06015"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"402.57587"	"1205.71305"	"1205.71417"	"-0.93"	"-0.00038"	"8/54"	"8"	"54"	"10385117.000061"	"HCD"	"MS2"	"6.495315"	"515.1"	"100.000"	"46.3130"	"13836"	"13836"	"13817"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"347.3"	""	"334.7"	""	"396.1"	""	"1255.7"	""	"1329.5"	"1256.5"	""	"622"	"24"	"34.000"	"27.000"	"0.118238902255694"	"22"	"0.009658"	"0.1273"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"603.36023"	"1205.71318"	"1205.71417"	"-0.82"	"-0.00050"	"6/54"	"6"	"54"	"2075506.8996582"	"HCD"	"MS2"	"8.309253"	"142.5"	"100.000"	"48.2664"	"14631"	"14631"	"14610"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"107.0"	""	"104.4"	""	"121.7"	""	"313.1"	""	"358.0"	"358.7"	""	"612"	"35"	"34.000"	"27.000"	"0.00907238405194449"	""	"0.002547"	"0.02552"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"603.36023"	"1205.71318"	"1205.71417"	"-0.82"	"-0.00050"	"6/54"	"6"	"54"	"2436885.29681396"	"HCD"	"MS2"	"7.02134"	"185.2"	"100.000"	"48.2406"	"14608"	"14608"	"14590"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"152.6"	""	"130.0"	""	"169.4"	""	"416.7"	""	"464.6"	"437.4"	""	"612"	"35"	"34.000"	"27.000"	"0.00905151814764774"	""	"0.002795"	"0.02634"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"603.36023"	"1205.71318"	"1205.71417"	"-0.82"	"-0.00050"	"6/54"	"6"	"54"	"5026348.19378662"	"HCD"	"MS2"	"1.476434"	"335.3"	"100.000"	"47.9375"	"14485"	"14485"	"14474"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"241.7"	""	"221.1"	""	"288.0"	""	"736.5"	""	"856.9"	"862.6"	""	"612"	"36"	"34.000"	"27.000"	"0.0081044104241365"	""	"0.00344"	"0.03244"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"603.36023"	"1205.71318"	"1205.71417"	"-0.82"	"-0.00050"	"6/54"	"6"	"54"	"5364347.51953125"	"HCD"	"MS2"	"0.9261417"	"355.2"	"100.000"	"47.6530"	"14382"	"14382"	"14365"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"249.1"	""	"231.8"	""	"319.5"	""	"800.1"	""	"902.1"	"894.4"	""	"612"	"38"	"34.000"	"27.000"	"0.00542901981152391"	""	"0.003111"	"0.03179"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"603.36029"	"1205.71330"	"1205.71417"	"-0.72"	"-0.00043"	"6/54"	"6"	"54"	"2641988.92712402"	"HCD"	"MS2"	"10.60132"	"191.4"	"100.000"	"47.9628"	"14507"	"14507"	"14488"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"151.4"	""	"140.8"	""	"171.1"	""	"421.5"	""	"469.5"	"476.8"	""	"612"	"37"	"34.000"	"27.000"	"0.00607745044711356"	""	"0.002937"	"0.02758"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"1"	"603.36029"	"1205.71330"	"1205.71417"	"-0.72"	"-0.00043"	"6/54"	"6"	"54"	"1641374.46148682"	"HCD"	"MS2"	"37.72148"	"128.5"	"100.000"	"49.2940"	"15038"	"15038"	"15014"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.0"	""	"117.5"	""	"139.0"	""	"252.4"	""	"290.1"	"300.5"	""	"612"	"23"	"34.000"	"27.000"	"0.152307548003554"	""	"0.00447"	"0.04683"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.3784"	"0.0000"	"1"	"1"	"1"	"603.36041"	"1205.71355"	"1205.71417"	"-0.52"	"-0.00031"	"6/54"	"6"	"54"	"6689067.08557129"	"HCD"	"MS2"	"0.9140826"	"428.3"	"100.000"	"47.6523"	"14370"	"14370"	"14353"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"310.7"	""	"303.5"	""	"356.3"	""	"934.3"	""	"1065.1"	"1122.3"	""	"612"	"37"	"34.000"	"27.000"	"0.0061336844037374"	""	"0.003449"	"0.03449"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDEATK"	"[R].aLDEATk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.4872"	"0.0000"	"1"	"1"	"1"	"603.36041"	"1205.71355"	"1205.71417"	"-0.52"	"-0.00031"	"6/54"	"6"	"54"	"4603192.28265381"	"HCD"	"MS2"	"3.901908"	"329.6"	"100.000"	"40.5100"	"11478"	"11478"	"11459"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"517.1"	""	"442.6"	""	"475.8"	""	"479.3"	"2.4"	"597.0"	"607.2"	""	"612"	"39"	"34.000"	"27.000"	"0.00417562439796211"	""	"0.004867"	"0.0519"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSDEAVK"	"[K].vSDEAVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35815"	"Protein phosphatase 1B OS=Rattus norvegicus OX=10116 GN=Ppm1b PE=2 SV=1"	"P35815"	"Protein phosphatase 1B OS=Rattus norvegicus OX=10116 GN=Ppm1b PE=2 SV=1"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"603.36047"	"1205.71367"	"1205.71417"	"-0.42"	"-0.00025"	"6/52"	"6"	"52"	"2988651.17596436"	"HCD"	"MS2"	"29.47877"	"219.8"	"100.000"	"38.8233"	"10781"	"10781"	"10757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"248.8"	""	"231.0"	""	"259.6"	""	"367.7"	"1.7"	"514.7"	"467.4"	""	"612"	"26"	"34.000"	"27.000"	"0.0725640353932467"	""	"0.00447"	"0.04888"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"603.36060"	"1205.71391"	"1205.71417"	"-0.22"	"-0.00013"	"6/54"	"6"	"54"	"9575747.52154541"	"HCD"	"MS2"	"7.947318"	"628.8"	"100.000"	"46.1543"	"13771"	"13771"	"13753"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"467.4"	""	"434.6"	""	"492.9"	""	"1561.5"	""	"1590.6"	"1463.9"	""	"612"	"37"	"34.000"	"27.000"	"0.00569798663818838"	""	"0.003111"	"0.03142"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"603.36060"	"1205.71391"	"1205.71417"	"-0.22"	"-0.00013"	"6/54"	"6"	"54"	"23492446.0495605"	"HCD"	"MS2"	"0"	"678.0"	"46.380"	"47.0295"	"14127"	"14127"	"14110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"421.4"	""	"404.0"	""	"532.3"	""	"1550.3"	""	"1807.7"	"1763.8"	""	"612"	"37"	"34.000"	"27.000"	"0.0055554779280858"	""	"0.00447"	"0.04787"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5676"	"0.0000"	"1"	"1"	"1"	"603.36066"	"1205.71404"	"1205.71417"	"-0.11"	"-0.00007"	"6/54"	"6"	"54"	"1889698.02996826"	"HCD"	"MS2"	"6.127255"	"140.4"	"100.000"	"48.5505"	"14734"	"14734"	"14717"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.8"	""	"102.6"	""	"122.4"	""	"325.5"	""	"356.3"	"329.3"	""	"612"	"37"	"34.000"	"27.000"	"0.00619043868675552"	""	"0.001374"	"0.01692"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"603.36066"	"1205.71404"	"1205.71417"	"-0.11"	"-0.00007"	"6/54"	"6"	"54"	"1726480.22229004"	"HCD"	"MS2"	"21.75055"	"117.4"	"100.000"	"48.8615"	"14861"	"14861"	"14840"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"95.0"	""	"79.6"	""	"115.7"	""	"248.9"	"0.7"	"299.0"	"280.5"	""	"612"	"36"	"34.000"	"27.000"	"0.00692981158123476"	""	"0.001374"	"0.0161"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSDEAVK"	"[K].vSDEAVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35815"	"Protein phosphatase 1B OS=Rattus norvegicus OX=10116 GN=Ppm1b PE=2 SV=1"	"P35815"	"Protein phosphatase 1B OS=Rattus norvegicus OX=10116 GN=Ppm1b PE=2 SV=1"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"603.36066"	"1205.71404"	"1205.71417"	"-0.11"	"-0.00007"	"10/52"	"10"	"52"	"2949132.74255371"	"HCD"	"MS2"	"23.6376"	"208.9"	"100.000"	"38.6316"	"10712"	"10712"	"10688"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"242.1"	""	"217.0"	""	"250.6"	""	"356.4"	"7.8"	"481.7"	"431.1"	""	"612"	"27"	"34.000"	"27.000"	"0.0629102522371147"	""	"0.004069"	"0.04417"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDEATK"	"[R].aLDEATk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"603.36066"	"1205.71404"	"1205.71417"	"-0.11"	"-0.00007"	"12/54"	"12"	"54"	"3846069.89343262"	"HCD"	"MS2"	"23.02159"	"277.4"	"100.000"	"40.3865"	"11419"	"11419"	"11397"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"460.4"	""	"381.1"	""	"379.3"	""	"407.9"	"0.2"	"491.7"	"505.2"	""	"612"	"42"	"34.000"	"27.000"	"0.00197570194084605"	"24"	"0.003111"	"0.03046"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGITEK"	"[R].eAGITEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"3"	"603.36066"	"1205.71404"	"1205.71417"	"-0.11"	"-0.00007"	"6/58"	"6"	"58"	"3787810.10516357"	"HCD"	"MS2"	"30.39804"	"263.6"	"100.000"	"37.4822"	"10243"	"10243"	"10225"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"384.5"	""	"275.8"	""	"331.7"	""	"427.1"	""	"509.1"	"576.8"	""	"612"	"24"	"34.000"	"27.000"	"0.128446249101248"	""	"0.007018"	"0.08186"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGITEK"	"[R].eAGITEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"3"	"603.36066"	"1205.71404"	"1205.71417"	"-0.11"	"-0.00007"	"6/58"	"6"	"58"	"13867608.0870972"	"HCD"	"MS2"	"34.41509"	"855.9"	"100.000"	"36.9785"	"10044"	"10044"	"10029"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1373.3"	""	"968.9"	""	"1099.3"	""	"1405.8"	""	"1524.9"	"1739.5"	""	"612"	"24"	"34.000"	"27.000"	"0.120982185740847"	""	"0.00736"	"0.08535"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"603.36072"	"1205.71416"	"1205.71417"	"-0.01"	"-0.00001"	"6/54"	"6"	"54"	"1834596.28167725"	"HCD"	"MS2"	"3.579613"	"125.7"	"100.000"	"48.5749"	"14757"	"14757"	"14735"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"96.9"	""	"103.3"	""	"118.9"	""	"275.3"	""	"299.0"	"305.5"	""	"612"	"35"	"34.000"	"27.000"	"0.00913527081388896"	""	"0.001812"	"0.02023"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDEATK"	"[R].aLDEATk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"603.36072"	"1205.71416"	"1205.71417"	"-0.01"	"-0.00001"	"12/54"	"12"	"54"	"4927895.54956055"	"HCD"	"MS2"	"21.20488"	"355.6"	"100.000"	"40.2158"	"11358"	"11358"	"11336"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"587.8"	""	"487.6"	""	"477.3"	""	"541.1"	""	"619.4"	"655.8"	""	"612"	"42"	"34.000"	"27.000"	"0.0019130284398936"	""	"0.003449"	"0.03296"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.3784"	"0.0000"	"1"	"1"	"1"	"603.36072"	"1205.71416"	"1205.71417"	"-0.01"	"-0.00001"	"6/54"	"6"	"54"	"7811855.30157471"	"HCD"	"MS2"	"0"	"521.8"	"100.000"	"47.3424"	"14255"	"14255"	"14238"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"371.7"	""	"340.4"	""	"408.9"	""	"1157.0"	""	"1335.2"	"1376.5"	""	"612"	"37"	"34.000"	"27.000"	"0.00599406470092833"	""	"0.003449"	"0.03458"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEELSK"	"[R].aAEELSk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"603.36078"	"1205.71428"	"1205.71417"	"0.09"	"0.00005"	"6/54"	"6"	"54"	"8231289.77368164"	"HCD"	"MS2"	"2.794986"	"597.3"	"100.000"	"40.9820"	"11660"	"11660"	"11644"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"890.5"	""	"769.2"	""	"837.2"	""	"905.2"	""	"1098.5"	"1167.3"	""	"611"	"33"	"34.000"	"27.000"	"0.0147574464023151"	""	"0.006685"	"0.07474"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEELSK"	"[R].aAEELSk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"603.36078"	"1205.71428"	"1205.71417"	"0.09"	"0.00005"	"6/54"	"6"	"54"	"8850474.04144287"	"HCD"	"MS2"	"5.943367"	"635.4"	"100.000"	"40.7864"	"11591"	"11591"	"11578"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1002.2"	""	"809.0"	""	"884.4"	""	"977.3"	""	"1147.0"	"1201.2"	""	"611"	"33"	"34.000"	"27.000"	"0.0143222488245379"	""	"0.006129"	"0.0698"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDEATK"	"[R].aLDEATk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.5135"	"0.0000"	"1"	"1"	"1"	"603.36084"	"1205.71440"	"1205.71417"	"0.19"	"0.00011"	"6/54"	"6"	"54"	"4723392.39605713"	"HCD"	"MS2"	"4.875277"	"339.8"	"100.000"	"40.6902"	"11542"	"11542"	"11528"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"525.0"	""	"446.2"	""	"479.4"	""	"487.8"	"0.6"	"611.2"	"668.5"	""	"610"	"37"	"34.000"	"27.000"	"0.00612773307845662"	""	"0.004942"	"0.05391"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"603.36096"	"1205.71465"	"1205.71417"	"0.39"	"0.00024"	"6/54"	"6"	"54"	"1177004.91308594"	"HCD"	"MS2"	"45.09969"	"96.2"	"100.000"	"50.0142"	"15344"	"15344"	"15318"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"82.4"	""	"88.4"	""	"86.1"	""	"176.4"	"0.6"	"261.3"	"223.2"	""	"610"	"27"	"34.000"	"27.000"	"0.062849212354735"	""	"0.001812"	"0.02052"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGITEK"	"[R].eAGITEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"3"	"603.36096"	"1205.71465"	"1205.71417"	"0.39"	"0.00024"	"6/58"	"6"	"58"	"16805501.6355591"	"HCD"	"MS2"	"34.0306"	"1041.1"	"100.000"	"37.1978"	"10127"	"10127"	"10109"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1680.4"	""	"1149.1"	""	"1348.2"	""	"1728.5"	""	"1827.8"	"2135.2"	""	"610"	"36"	"34.000"	"27.000"	"0.00828513976995921"	""	"0.003967"	"0.04179"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"603.36102"	"1205.71477"	"1205.71417"	"0.49"	"0.00030"	"6/54"	"6"	"54"	"11616993.4442749"	"HCD"	"MS2"	"0"	"770.6"	"100.000"	"47.3394"	"14242"	"14242"	"14225"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"506.6"	""	"452.7"	""	"608.1"	""	"1742.4"	""	"2053.9"	"2004.9"	""	"610"	"36"	"34.000"	"27.000"	"0.00820918115197709"	""	"0.003449"	"0.03325"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5588"	"0.0000"	"1"	"1"	"1"	"603.36108"	"1205.71489"	"1205.71417"	"0.59"	"0.00036"	"6/54"	"6"	"54"	"7810073.69921875"	"HCD"	"MS2"	"11.11589"	"508.5"	"100.000"	"46.3200"	"13827"	"13827"	"13805"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"386.2"	""	"356.4"	""	"425.1"	""	"1256.0"	""	"1242.0"	"1189.2"	""	"612"	"34"	"34.000"	"27.000"	"0.0115537090423177"	""	"0.003449"	"0.03492"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"603.36127"	"1205.71526"	"1205.71417"	"0.90"	"0.00054"	"6/54"	"6"	"54"	"416056236.357422"	"HCD"	"MS2"	"0"	"747.7"	"2.718"	"46.7166"	"13999"	"13999"	"13983"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"443.3"	""	"419.4"	""	"585.9"	""	"1708.4"	""	"2022.7"	"1980.6"	""	"612"	"37"	"34.000"	"27.000"	"0.00563276232449501"	""	"0.005829"	"0.06468"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"603.36133"	"1205.71538"	"1205.71417"	"1.00"	"0.00060"	"6/54"	"6"	"54"	"877581019.625"	"HCD"	"MS2"	"0"	"861.8"	"1.486"	"46.6023"	"13943"	"13943"	"13927"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"566.1"	""	"512.5"	""	"661.4"	""	"2061.2"	""	"2265.9"	"2170.2"	""	"610"	"37"	"34.000"	"27.000"	"0.00557570565923536"	""	"0.006505"	"0.07324"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.4595"	"0.0000"	"1"	"1"	"1"	"603.36182"	"1205.71636"	"1205.71417"	"1.81"	"0.00109"	"6/54"	"6"	"54"	"195133913.21875"	"HCD"	"MS2"	"0.06047872"	"658.4"	"5.100"	"47.0265"	"14114"	"14114"	"14097"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"400.1"	""	"362.6"	""	"524.0"	""	"1471.0"	""	"1801.3"	"1744.9"	""	"604"	"37"	"34.000"	"27.000"	"0.00559766550271273"	""	"0.005874"	"0.06644"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYPFHAEV"	"[K].dYPFHAEV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"603.80280"	"1206.59831"	"1206.59925"	"-0.78"	"-0.00047"	"11/70"	"11"	"70"	"12278148.0630493"	"HCD"	"MS2"	"0.8321795"	"114.1"	"88.952"	"68.1092"	"22672"	"22672"	"22658"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"159.2"	""	"152.4"	""	"156.0"	""	"160.5"	""	"222.3"	"232.5"	""	"538"	"21"	"34.000"	"27.000"	"0.234289205698186"	"17"	"0.003507"	"0.03643"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYPFHAEV"	"[K].dYPFHAEV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.80292"	"1206.59856"	"1206.59925"	"-0.58"	"-0.00035"	"9/70"	"9"	"70"	"10429207.9746704"	"HCD"	"MS2"	"0.7026"	"116.0"	"100.000"	"68.2006"	"22695"	"22695"	"22678"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"154.8"	""	"149.3"	""	"167.1"	""	"173.0"	"0.7"	"220.9"	"234.2"	""	"549"	"19"	"34.000"	"27.000"	"0.341619260931245"	"14"	"0.004942"	"0.05521"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVFEGQNR"	"[R].qVFEGQNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"0"	"2"	"2"	"0.0625"	"0.0000"	"1"	"1"	"1"	"603.82477"	"1206.64226"	"1206.64285"	"-0.49"	"-0.00030"	"4/70"	"4"	"70"	"2139579.31732178"	"HCD"	"MS2"	"13.27963"	"132.2"	"100.000"	"30.9530"	"7602"	"7602"	"7585"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"183.4"	""	"128.2"	""	"154.6"	""	"240.8"	"1.9"	"280.9"	"265.5"	""	"788"	"16"	"35.000"	"28.000"	"1.09017500829214"	"28"	"0.007279"	"0.08322"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFLEDVR"	"[K].qAFLEDVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"603.83691"	"1206.66655"	"1206.66800"	"-1.20"	"-0.00073"	"6/72"	"6"	"72"	"1849416.67755127"	"HCD"	"MS2"	"0"	"91.3"	"100.000"	"62.1640"	"20258"	"20258"	"20242"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"122.5"	""	"103.5"	""	"126.2"	""	"161.7"	""	"178.7"	"174.5"	""	"791"	"31"	"35.000"	"28.000"	"0.0290500234856139"	"25"	"0.003449"	"0.03311"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFLEDVR"	"[K].qAFLEDVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"603.83710"	"1206.66692"	"1206.66800"	"-0.90"	"-0.00054"	"6/72"	"6"	"72"	"5902201.21661377"	"HCD"	"MS2"	"0"	"231.2"	"100.000"	"62.4599"	"20377"	"20377"	"20359"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"312.0"	""	"248.4"	""	"286.8"	""	"407.1"	""	"458.3"	"482.4"	""	"791"	"57"	"35.000"	"28.000"	"8.22520039749511E-05"	"23"	"0"	"0.002648"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFLEDVR"	"[K].qAFLEDVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"603.83722"	"1206.66716"	"1206.66800"	"-0.70"	"-0.00042"	"6/72"	"6"	"72"	"5404444.85235596"	"HCD"	"MS2"	"0"	"217.6"	"100.000"	"62.5838"	"20412"	"20412"	"20395"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"300.3"	""	"222.3"	""	"258.5"	""	"396.2"	""	"427.3"	"464.3"	""	"776"	"57"	"35.000"	"28.000"	"8.10646898771367E-05"	"25"	"0"	"0.001395"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFLEDVR"	"[K].qAFLEDVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"603.83740"	"1206.66753"	"1206.66800"	"-0.39"	"-0.00024"	"5/72"	"5"	"72"	"1825758.66021729"	"HCD"	"MS2"	"0"	"92.3"	"100.000"	"62.2854"	"20291"	"20291"	"20274"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"119.6"	""	"109.2"	""	"123.4"	""	"159.2"	""	"182.3"	"188.3"	""	"779"	"35"	"35.000"	"28.000"	"0.0133508052859842"	"22"	"0.0002479"	"0.005562"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFLEDVR"	"[K].qAFLEDVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"603.83759"	"1206.66789"	"1206.66800"	"-0.09"	"-0.00005"	"6/72"	"6"	"72"	"648636.926879883"	"HCD"	"MS2"	"33.31902"	"41.4"	"100.000"	"62.9083"	"20544"	"20544"	"20522"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.2"	""	"49.1"	""	"49.7"	""	"60.8"	""	"89.9"	"93.0"	""	"777"	"31"	"35.000"	"28.000"	"0.0339931196675859"	"22"	"0.001546"	"0.01914"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFLEDVR"	"[K].qAFLEDVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"603.83765"	"1206.66802"	"1206.66800"	"0.01"	"0.00001"	"6/72"	"6"	"72"	"776095.74987793"	"HCD"	"MS2"	"12.47174"	"45.4"	"100.000"	"62.7640"	"20501"	"20501"	"20481"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.5"	""	"47.0"	""	"58.9"	""	"75.0"	"0.1"	"93.4"	"98.6"	""	"776"	"29"	"35.000"	"28.000"	"0.0481761095345855"	"21"	"0.001374"	"0.01605"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGTDADAK"	"[R].aGTDADAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"603.83966"	"1206.67204"	"1206.67304"	"-0.82"	"-0.00050"	"7/62"	"7"	"62"	"2566946.24108887"	"HCD"	"MS2"	"0"	"211.0"	"100.000"	"25.1718"	"5258"	"5258"	"5238"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"223.4"	""	"160.6"	""	"206.5"	""	"402.6"	"3.8"	"496.3"	"517.0"	""	"773"	"55"	"35.000"	"28.000"	"0.000113540159048313"	""	"0"	"0.003342"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGTDADAK"	"[R].aGTDADAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"603.84265"	"1206.67803"	"1206.67304"	"4.13"	"0.00249"	"5/62"	"5"	"62"	"1965443.96881104"	"HCD"	"MS2"	"0"	"148.7"	"100.000"	"24.8755"	"5140"	"5140"	"5124"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"200.5"	""	"142.4"	""	"157.5"	""	"286.4"	"3.5"	"294.5"	"327.7"	""	"701"	"20"	"35.000"	"28.000"	"0.384315607748186"	"27"	"0.004069"	"0.0447"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGTDADAK"	"[R].aGTDADAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.1875"	"0.0000"	"1"	"1"	"1"	"603.84308"	"1206.67888"	"1206.67304"	"4.84"	"0.00292"	"12/62"	"12"	"62"	"2662015.82232666"	"HCD"	"MS2"	"14.49373"	"200.8"	"100.000"	"24.9998"	"5175"	"5175"	"5152"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"250.8"	""	"167.8"	""	"188.5"	""	"444.5"	"6.5"	"438.5"	"411.8"	""	"703"	"32"	"35.000"	"28.000"	"0.0203669186794049"	""	"0.000936"	"0.01299"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVSQAK"	"[R].sEVSQAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"603.85876"	"1206.71025"	"1206.70942"	"0.69"	"0.00041"	"12/58"	"12"	"58"	"2123795.91241455"	"HCD"	"MS2"	"0"	"155.7"	"100.000"	"26.5882"	"5817"	"5817"	"5794"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"241.7"	""	"199.2"	""	"211.3"	""	"225.7"	""	"287.8"	"313.1"	""	"584"	"39"	"34.000"	"27.000"	"0.00376168869094395"	""	"0.002973"	"0.02989"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVSQAK"	"[R].sEVSQAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"603.85999"	"1206.71269"	"1206.70942"	"2.71"	"0.00164"	"6/58"	"6"	"58"	"1970355.41210938"	"HCD"	"MS2"	"0"	"156.0"	"100.000"	"26.4017"	"5757"	"5757"	"5741"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"230.0"	""	"197.8"	""	"209.3"	""	"234.9"	""	"306.1"	"304.1"	""	"570"	"35"	"34.000"	"27.000"	"0.00812540206238614"	""	"0.003967"	"0.04143"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENIFGENR"	"[K].eNIFGENR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"604.31708"	"1207.62688"	"1207.62687"	"0.01"	"0.00001"	"6/78"	"6"	"78"	"2137181.27490234"	"HCD"	"MS2"	"12.96564"	"129.2"	"100.000"	"48.7637"	"14834"	"14834"	"14815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"200.0"	""	"142.9"	""	"162.1"	""	"209.3"	""	"258.3"	"256.1"	""	"677"	"31"	"35.000"	"28.000"	"0.029686477795712"	"27"	"0.002973"	"0.02849"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENIFGENR"	"[K].eNIFGENR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"604.31732"	"1207.62737"	"1207.62687"	"0.41"	"0.00025"	"6/78"	"6"	"78"	"1968349.00396729"	"HCD"	"MS2"	"13.00066"	"118.8"	"100.000"	"49.0526"	"14939"	"14939"	"14918"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"155.4"	""	"132.9"	""	"147.3"	""	"205.4"	""	"242.3"	"245.0"	""	"678"	"31"	"35.000"	"28.000"	"0.0278740258332057"	"27"	"0.001812"	"0.0204"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSAEQIAR"	"[R].gFSAEQIAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O35777"	"Magnesium transporter protein 1 OS=Rattus norvegicus OX=10116 GN=Magt1 PE=2 SV=2"	"O35777"	"Magnesium transporter protein 1 OS=Rattus norvegicus OX=10116 GN=Magt1 PE=2 SV=2"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"604.33484"	"1207.66240"	"1207.66325"	"-0.70"	"-0.00043"	"8/74"	"8"	"74"	"1460146.42053223"	"HCD"	"MS2"	"24.90707"	"88.7"	"100.000"	"49.7152"	"15210"	"15210"	"15185"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"88.2"	""	"101.4"	""	"96.1"	""	"180.8"	"0.2"	"195.6"	"181.3"	""	"725"	"18"	"35.000"	"28.000"	"0.587906160292612"	"25"	"0.0004639"	"0.00805"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSAEQIAR"	"[R].gFSAEQIAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O35777"	"Magnesium transporter protein 1 OS=Rattus norvegicus OX=10116 GN=Magt1 PE=2 SV=2"	"O35777"	"Magnesium transporter protein 1 OS=Rattus norvegicus OX=10116 GN=Magt1 PE=2 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"604.33521"	"1207.66313"	"1207.66325"	"-0.10"	"-0.00006"	"14/74"	"14"	"74"	"1580251.0980835"	"HCD"	"MS2"	"30.50046"	"93.7"	"100.000"	"49.3345"	"15066"	"15066"	"15047"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"99.1"	""	"98.2"	""	"111.5"	""	"182.9"	"1.6"	"198.3"	"198.7"	""	"733"	"20"	"35.000"	"28.000"	"0.328907653184524"	"24"	"0"	"0.003557"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEISEMNR"	"[K].tEISEMNR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.1304"	"0.0000"	"1"	"1"	"1"	"604.81171"	"1208.61614"	"1208.61425"	"1.56"	"0.00094"	"6/66"	"6"	"66"	"8043560.20904541"	"HCD"	"MS2"	"3.421854"	"438.8"	"100.000"	"35.0511"	"9260"	"9260"	"9242"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"864.4"	""	"572.5"	""	"540.0"	""	"632.8"	"0.5"	"729.8"	"810.3"	""	"622"	"23"	"34.000"	"27.000"	"0.144131992037985"	""	"0.002056"	"0.02263"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEISEMNR"	"[K].tEISEMNR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"604.81244"	"1208.61760"	"1208.61425"	"2.77"	"0.00167"	"6/66"	"6"	"66"	"7181211.69604492"	"HCD"	"MS2"	"5.102542"	"374.5"	"100.000"	"35.1264"	"9286"	"9286"	"9271"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"718.0"	""	"496.4"	""	"451.8"	""	"572.2"	"4.1"	"605.4"	"693.9"	""	"618"	"22"	"34.000"	"27.000"	"0.175775555630747"	""	"0.0023"	"0.0234"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQVDNSNR"	"[K].fQVDNSNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"604.81372"	"1208.62016"	"1208.62212"	"-1.61"	"-0.00098"	"6/72"	"6"	"72"	"4222038.03527832"	"HCD"	"MS2"	"1.517794"	"232.2"	"100.000"	"35.4366"	"9412"	"9412"	"9394"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"490.3"	""	"308.4"	""	"279.4"	""	"367.6"	""	"344.9"	"404.0"	""	"610"	"35"	"34.000"	"27.000"	"0.00962276410129262"	"25"	"0.004817"	"0.05099"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQVDNSNR"	"[K].fQVDNSNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"604.81403"	"1208.62078"	"1208.62212"	"-1.11"	"-0.00067"	"6/72"	"6"	"72"	"4265035.34289551"	"HCD"	"MS2"	"0"	"227.7"	"100.000"	"35.3455"	"9381"	"9381"	"9364"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"473.0"	""	"302.6"	""	"260.0"	""	"365.3"	""	"351.9"	"401.4"	""	"598"	"34"	"34.000"	"27.000"	"0.0124357272537712"	"23"	"0.00413"	"0.04581"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEELTPI"	"[K].yDEELTPI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"604.81549"	"1208.62370"	"1208.62480"	"-0.91"	"-0.00055"	"6/66"	"6"	"66"	"323533.94921875"	"HCD"	"MS2"	"0"	"10.1"	"100.000"	"92.3345"	"32323"	"32323"	"32306"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.5"	""	"12.4"	""	"14.1"	""	"14.3"	""	"24.6"	"17.5"	""	"641"	"23"	"35.000"	"28.000"	"0.176127850071369"	"19"	"0.002871"	"0.02717"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEELTPI"	"[K].yDEELTPI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"604.81604"	"1208.62480"	"1208.62480"	"0.00"	"0.00000"	"4/66"	"4"	"66"	"308915.208312988"	"HCD"	"MS2"	"14.79423"	"9.3"	"100.000"	"92.2980"	"32299"	"32299"	"32283"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.4"	""	"7.2"	""	"17.6"	""	"18.8"	""	"16.3"	"17.7"	""	"642"	"27"	"35.000"	"28.000"	"0.071204105075587"	"20"	"0.001886"	"0.02141"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEELTPI"	"[K].yDEELTPI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"604.81610"	"1208.62493"	"1208.62480"	"0.10"	"0.00006"	"5/66"	"5"	"66"	"792585.851989746"	"HCD"	"MS2"	"0"	"19.4"	"100.000"	"93.1328"	"32618"	"32618"	"32607"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.9"	""	"20.8"	""	"28.4"	""	"30.7"	""	"42.1"	"42.9"	""	"642"	"38"	"35.000"	"28.000"	"0.00501770393287746"	"20"	"0.0001301"	"0.004933"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEELTPI"	"[K].yDEELTPI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"604.81610"	"1208.62493"	"1208.62480"	"0.10"	"0.00006"	"5/66"	"5"	"66"	"769513.679138184"	"HCD"	"MS2"	"0"	"20.2"	"100.000"	"93.1857"	"32652"	"32652"	"32642"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.2"	""	"18.2"	""	"26.5"	""	"30.3"	""	"47.0"	"51.5"	""	"642"	"41"	"35.000"	"28.000"	"0.00253807839587944"	"21"	"0.0006732"	"0.008818"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEELTPI"	"[K].yDEELTPI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"604.81622"	"1208.62517"	"1208.62480"	"0.31"	"0.00018"	"5/66"	"5"	"66"	"6667195.94903564"	"HCD"	"MS2"	"0"	"143.1"	"100.000"	"92.9039"	"32546"	"32546"	"32535"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"151.8"	""	"155.6"	""	"174.8"	""	"215.9"	""	"326.5"	"337.4"	""	"642"	"41"	"35.000"	"28.000"	"0.00240716041195718"	"21"	"0.001374"	"0.01607"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEELTPI"	"[K].yDEELTPI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"604.81641"	"1208.62554"	"1208.62480"	"0.61"	"0.00037"	"5/66"	"5"	"66"	"10053263.4475708"	"HCD"	"MS2"	"0.07497737"	"150.6"	"82.956"	"92.5788"	"32408"	"32408"	"32402"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"162.4"	""	"174.7"	""	"180.0"	""	"238.9"	""	"332.8"	"345.9"	""	"642"	"41"	"35.000"	"28.000"	"0.00239610051449631"	"21"	"0.001546"	"0.0194"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEELTPI"	"[K].yDEELTPI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"604.81653"	"1208.62578"	"1208.62480"	"0.81"	"0.00049"	"5/66"	"5"	"66"	"11461058.0941162"	"HCD"	"MS2"	"0"	"178.9"	"77.212"	"92.6379"	"32443"	"32443"	"32428"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"186.2"	""	"202.4"	""	"221.4"	""	"289.7"	""	"409.1"	"394.7"	""	"642"	"41"	"35.000"	"28.000"	"0.00240716041195718"	"22"	"0.001635"	"0.01961"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEELTPI"	"[K].yDEELTPI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"604.81665"	"1208.62602"	"1208.62480"	"1.01"	"0.00061"	"5/66"	"5"	"66"	"8691260.68890381"	"HCD"	"MS2"	"0.08437328"	"152.5"	"89.700"	"92.8499"	"32511"	"32511"	"32503"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"148.0"	""	"166.2"	""	"199.0"	""	"247.2"	""	"344.4"	"350.3"	""	"629"	"38"	"34.000"	"27.000"	"0.00474920208484625"	"20"	"0.001812"	"0.02085"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAATLMTER"	"[R].aAATLmTER.[V]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"604.82849"	"1208.64971"	"1208.65064"	"-0.77"	"-0.00047"	"7/72"	"7"	"72"	"4408166.89379883"	"HCD"	"MS2"	"13.09198"	"173.2"	"100.000"	"30.2880"	"7322"	"7322"	"7306"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"177.1"	""	"146.6"	""	"160.6"	""	"494.7"	"1.3"	"327.3"	"336.3"	""	"697"	"30"	"35.000"	"28.000"	"0.0383003535042234"	"14"	"0.001635"	"0.01976"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAATLMTER"	"[R].aAATLmTER.[V]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"604.82892"	"1208.65056"	"1208.65064"	"-0.06"	"-0.00004"	"7/72"	"7"	"72"	"5084273.16784668"	"HCD"	"MS2"	"11.04374"	"203.8"	"100.000"	"30.2696"	"7326"	"7326"	"7311"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"192.1"	""	"184.0"	""	"189.7"	""	"564.1"	"4.1"	"396.9"	"405.2"	""	"714"	"31"	"35.000"	"28.000"	"0.0255663197446006"	"14"	"0.002056"	"0.02226"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGSDSAK"	"[K].dAGSDSAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"604.82947"	"1208.65166"	"1208.65230"	"-0.53"	"-0.00032"	"7/66"	"7"	"66"	"12698081.1774902"	"HCD"	"MS2"	"0"	"903.1"	"100.000"	"22.5552"	"4206"	"4206"	"4186"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1703.1"	""	"1035.2"	""	"1213.5"	""	"1506.9"	""	"1560.4"	"1531.2"	""	"690"	"42"	"35.000"	"28.000"	"0.00210290229547858"	"25"	"0.0003538"	"0.006243"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGSDSAK"	"[K].dAGSDSAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"604.82990"	"1208.65251"	"1208.65230"	"0.17"	"0.00011"	"7/66"	"7"	"66"	"11193565.230896"	"HCD"	"MS2"	"0"	"834.8"	"100.000"	"22.5783"	"4199"	"4199"	"4174"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1610.3"	""	"1011.8"	""	"1116.1"	""	"1368.6"	""	"1367.7"	"1420.2"	""	"687"	"42"	"35.000"	"28.000"	"0.00210827248774107"	"26"	"0"	"0.003764"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMADTGK"	"[K].qMADTGk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"604.83972"	"1208.67217"	"1208.67093"	"1.02"	"0.00062"	"10/62"	"10"	"62"	"2811446.98565674"	"HCD"	"MS2"	"0"	"229.1"	"100.000"	"30.6914"	"7498"	"7498"	"7478"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"382.4"	""	"253.5"	""	"235.0"	""	"300.1"	"2.7"	"496.0"	"506.8"	""	"711"	"26"	"35.000"	"28.000"	"0.0999630745206823"	"17"	"0.006254"	"0.07096"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMADTGK"	"[K].qMADTGk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"604.84009"	"1208.67290"	"1208.67093"	"1.63"	"0.00099"	"10/62"	"10"	"62"	"2444986.81207275"	"HCD"	"MS2"	"13.50582"	"198.6"	"100.000"	"30.7078"	"7493"	"7493"	"7476"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"308.0"	""	"221.0"	""	"218.4"	""	"266.7"	"2.6"	"430.8"	"439.1"	""	"706"	"28"	"35.000"	"28.000"	"0.0550522033497915"	"18"	"0.004942"	"0.05397"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVVYTGDR"	"[R].gIVVYTGDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"604.84509"	"1208.68291"	"1208.68365"	"-0.62"	"-0.00037"	"8/68"	"8"	"68"	"686738.208557129"	"HCD"	"MS2"	"0"	"49.8"	"100.000"	"53.6803"	"16839"	"16839"	"16812"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.4"	""	"59.9"	""	"72.6"	""	"76.2"	""	"110.4"	"100.6"	""	"576"	"30"	"34.000"	"27.000"	"0.028999632062932"	"15"	"0"	"0.003532"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVVYTGDR"	"[R].gIVVYTGDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"604.84546"	"1208.68364"	"1208.68365"	"-0.01"	"-0.00001"	"6/68"	"6"	"68"	"565566.635925293"	"HCD"	"MS2"	"22.50465"	"46.9"	"100.000"	"53.9154"	"16924"	"16924"	"16896"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.6"	""	"61.4"	""	"59.7"	""	"74.7"	""	"114.4"	"87.6"	""	"598"	"14"	"34.000"	"27.000"	"1.27547276121676"	"21"	"0.003717"	"0.03866"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGSVDFGR"	"[R].qDGSVDFGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.9038"	"0.0000"	"1"	"1"	"1"	"605.30621"	"1209.60515"	"1209.60613"	"-0.81"	"-0.00049"	"7/88"	"7"	"88"	"7421762.16113281"	"HCD"	"MS2"	"1.780422"	"344.7"	"100.000"	"38.2865"	"10571"	"10571"	"10552"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"472.4"	""	"384.1"	""	"331.8"	""	"735.7"	"2.4"	"743.6"	"602.1"	""	"491"	"52"	"33.000"	"26.000"	"0.000167128877559314"	"21"	"0"	"0.0003879"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGSVDFGR"	"[R].qDGSVDFGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"605.30634"	"1209.60539"	"1209.60613"	"-0.61"	"-0.00037"	"7/88"	"7"	"88"	"3522259.80883789"	"HCD"	"MS2"	"7.592724"	"183.5"	"100.000"	"37.9993"	"10454"	"10454"	"10430"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"252.4"	""	"204.0"	""	"167.2"	""	"376.5"	""	"416.5"	"327.8"	""	"494"	"51"	"33.000"	"26.000"	"0.000178113547358176"	"20"	"0"	"0.0002593"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGSVDFGR"	"[R].qDGSVDFGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"605.30664"	"1209.60600"	"1209.60613"	"-0.10"	"-0.00006"	"7/88"	"7"	"88"	"2489650.92547607"	"HCD"	"MS2"	"18.02187"	"146.2"	"100.000"	"38.1633"	"10513"	"10513"	"10487"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"199.2"	""	"164.4"	""	"145.2"	""	"302.5"	"1.1"	"330.6"	"244.9"	""	"507"	"45"	"34.000"	"27.000"	"0.000776207730440586"	"25"	"0"	"0.0002999"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGSVDFGR"	"[R].qDGSVDFGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"605.30676"	"1209.60625"	"1209.60613"	"0.10"	"0.00006"	"7/88"	"7"	"88"	"7852796.82617188"	"HCD"	"MS2"	"0"	"363.2"	"100.000"	"38.4599"	"10633"	"10633"	"10622"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"497.3"	""	"413.1"	""	"327.2"	""	"796.7"	""	"799.6"	"616.1"	""	"502"	"52"	"33.000"	"27.000"	"0.000169696826823387"	"21"	"0"	"0.0001884"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDAQTGADR"	"[R].fDAQTGADR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"605.30695"	"1209.60661"	"1209.60613"	"0.40"	"0.00024"	"13/86"	"13"	"86"	"2773373.12255859"	"HCD"	"MS2"	"23.81885"	"146.8"	"100.000"	"33.5214"	"8637"	"8637"	"8620"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"232.7"	"3.0"	"199.4"	""	"207.4"	""	"222.9"	"1.4"	"265.3"	"258.3"	""	"502"	"40"	"33.000"	"27.000"	"0.00272065655419322"	"24"	"0"	"0.0005574"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLSGMSGSR"	"[K].aDLSGMSGSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"605.30713"	"1209.60698"	"1209.60950"	"-2.08"	"-0.00126"	"8/86"	"8"	"86"	"2108059.2454834"	"HCD"	"MS2"	"17.25162"	"137.7"	"100.000"	"38.5948"	"10697"	"10697"	"10672"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"205.5"	""	"184.0"	""	"168.8"	""	"213.3"	""	"284.4"	"252.2"	""	"498"	"26"	"33.000"	"26.000"	"0.0608414207620799"	"24"	"0"	"0.001319"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLSGMSGSR"	"[K].aDLSGMSGSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"605.30756"	"1209.60784"	"1209.60950"	"-1.38"	"-0.00083"	"8/86"	"8"	"86"	"2028452.57019043"	"HCD"	"MS2"	"15.57917"	"132.3"	"100.000"	"38.7865"	"10766"	"10766"	"10741"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"188.3"	""	"164.7"	""	"166.8"	""	"215.2"	""	"278.5"	"241.8"	""	"521"	"25"	"34.000"	"27.000"	"0.0897031569638497"	"22"	"0"	"0.001507"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVNWIER"	"[R].yVnWIER.[E]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"605.32574"	"1209.64421"	"1209.64654"	"-1.92"	"-0.00116"	"5/56"	"5"	"56"	"534812.395324707"	"HCD"	"MS2"	"25.74281"	"31.6"	"100.000"	"74.4438"	"25251"	"25251"	"25228"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.3"	""	"41.6"	""	"36.9"	""	"50.0"	""	"64.5"	"61.5"	""	"635"	"22"	"35.000"	"28.000"	"0.21416264879409"	"19"	"0.00557"	"0.0629"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVNWIER"	"[R].yVnWIER.[E]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"605.32629"	"1209.64531"	"1209.64654"	"-1.02"	"-0.00061"	"5/56"	"5"	"56"	"471844.80859375"	"HCD"	"MS2"	"21.22231"	"27.6"	"100.000"	"74.5557"	"25283"	"25283"	"25261"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.4"	""	"38.0"	""	"37.6"	""	"47.2"	""	"49.4"	"49.2"	""	"635"	"22"	"35.000"	"28.000"	"0.206892015114318"	"20"	"0.003717"	"0.03859"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGPPAAGPGNR"	"[R].sGPPAAGPGNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.9273"	"0.0000"	"1"	"1"	"1"	"605.33008"	"1209.65288"	"1209.65375"	"-0.72"	"-0.00044"	"9/82"	"9"	"82"	"2821630.9263916"	"HCD"	"MS2"	"0"	"127.7"	"100.000"	"22.1055"	"4006"	"4006"	"3982"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"193.1"	""	"154.9"	""	"166.1"	""	"219.3"	""	"247.8"	"228.9"	""	"635"	"55"	"35.000"	"28.000"	"0.000107583019574197"	"20"	"0"	"0.0001034"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGPPAAGPGNR"	"[R].sGPPAAGPGNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"605.33038"	"1209.65349"	"1209.65375"	"-0.21"	"-0.00013"	"10/82"	"10"	"82"	"3078637.6194458"	"HCD"	"MS2"	"9.066792"	"135.5"	"100.000"	"21.9721"	"3969"	"3969"	"3951"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"190.5"	""	"164.2"	""	"175.1"	""	"235.9"	"2.0"	"260.1"	"257.2"	""	"632"	"54"	"34.000"	"28.000"	"0.00011289821685601"	"20"	"0"	"0.0001785"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEMGK"	"[K].eAAEmGk.[G]"	"N-Term(TMT6plex); M5(Oxidation); K7(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"605.33093"	"1209.65459"	"1209.65495"	"-0.29"	"-0.00018"	"6/54"	"6"	"54"	"13541113.0922852"	"HCD"	"MS2"	"0"	"693.5"	"100.000"	"23.8932"	"4736"	"4736"	"4711"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"869.2"	""	"730.3"	""	"797.0"	""	"1861.6"	""	"1276.4"	"1038.7"	""	"621"	"17"	"34.000"	"27.000"	"0.659267405451068"	"24"	"0.009916"	"0.128"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYSTGSPGSR"	"[R].aYSTGSPGSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU8"	"Rho family-interacting cell polarization regulator 1 OS=Rattus norvegicus OX=10116 GN=Ripor1 PE=1 SV=2"	"Q4FZU8"	"Rho family-interacting cell polarization regulator 1 OS=Rattus norvegicus OX=10116 GN=Ripor1 PE=1 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"606.31317"	"1211.61907"	"1211.62178"	"-2.24"	"-0.00136"	"8/84"	"8"	"84"	"847277.382324219"	"HCD"	"MS2"	"21.52238"	"68.8"	"100.000"	"23.3628"	"4537"	"4537"	"4513"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"97.7"	""	"99.5"	""	"99.2"	""	"94.6"	""	"132.6"	"133.7"	""	"473"	"22"	"33.000"	"26.000"	"0.162491686063366"	"15"	"0.0008629"	"0.01012"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYSTGSPGSR"	"[R].aYSTGSPGSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU8"	"Rho family-interacting cell polarization regulator 1 OS=Rattus norvegicus OX=10116 GN=Ripor1 PE=1 SV=2"	"Q4FZU8"	"Rho family-interacting cell polarization regulator 1 OS=Rattus norvegicus OX=10116 GN=Ripor1 PE=1 SV=2"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"606.31531"	"1211.62334"	"1211.62178"	"1.29"	"0.00078"	"9/84"	"9"	"84"	"1231180.17053223"	"HCD"	"MS2"	"13.32638"	"87.4"	"100.000"	"23.3926"	"4532"	"4532"	"4511"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"116.3"	""	"125.7"	""	"110.7"	""	"123.2"	""	"185.0"	"169.9"	""	"488"	"33"	"33.000"	"26.000"	"0.0111529518266029"	"15"	"0"	"0.0004218"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEMATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"606.31665"	"1211.62602"	"1211.62917"	"-2.60"	"-0.00158"	"6/68"	"6"	"68"	"581710.231872559"	"HCD"	"MS2"	"47.46362"	"28.4"	"100.000"	"63.4599"	"20783"	"20783"	"20763"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.2"	""	"39.9"	""	"39.2"	""	"39.9"	""	"43.7"	"59.6"	""	"481"	"17"	"33.000"	"26.000"	"0.504795042011458"	"17"	"0.004069"	"0.04437"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEMATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"606.31769"	"1211.62810"	"1211.62917"	"-0.89"	"-0.00054"	"6/68"	"6"	"68"	"702796.720092773"	"HCD"	"MS2"	"44.83823"	"32.0"	"100.000"	"63.5395"	"20801"	"20801"	"20779"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.0"	""	"49.4"	""	"49.4"	""	"41.3"	"0.5"	"50.1"	"67.5"	""	"501"	"14"	"33.000"	"26.000"	"0.892910089232743"	"16"	"0.004867"	"0.05247"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEMATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"606.31793"	"1211.62859"	"1211.62917"	"-0.48"	"-0.00029"	"6/68"	"6"	"68"	"5565547.3067627"	"HCD"	"MS2"	"0.8947527"	"263.1"	"100.000"	"62.8555"	"20523"	"20523"	"20506"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"441.5"	""	"424.1"	""	"407.1"	""	"281.7"	""	"470.9"	"464.6"	""	"502"	"39"	"33.000"	"27.000"	"0.00284232491172125"	"20"	"0.0001301"	"0.00492"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEMATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"606.31799"	"1211.62871"	"1211.62917"	"-0.38"	"-0.00023"	"6/68"	"6"	"68"	"9293990.0847168"	"HCD"	"MS2"	"0.6356851"	"424.7"	"100.000"	"63.1479"	"20642"	"20642"	"20625"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"677.2"	""	"688.5"	""	"667.4"	""	"431.7"	""	"769.6"	"790.0"	""	"508"	"39"	"34.000"	"27.000"	"0.00355495179933445"	"24"	"0.0002479"	"0.005916"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEMATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"606.31824"	"1211.62920"	"1211.62917"	"0.02"	"0.00001"	"6/68"	"6"	"68"	"9556411.32073975"	"HCD"	"MS2"	"1.285418"	"330.8"	"77.140"	"63.0543"	"20619"	"20619"	"20605"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"519.3"	""	"530.8"	""	"549.4"	""	"323.1"	""	"612.7"	"604.0"	""	"512"	"38"	"34.000"	"27.000"	"0.00384804343319046"	"24"	"0.0002479"	"0.005688"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEMATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"606.31842"	"1211.62956"	"1211.62917"	"0.32"	"0.00019"	"6/68"	"6"	"68"	"5989639.52862549"	"HCD"	"MS2"	"0"	"284.5"	"100.000"	"62.7569"	"20498"	"20498"	"20481"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"479.4"	""	"468.6"	""	"436.4"	""	"323.2"	""	"501.2"	"487.4"	""	"512"	"39"	"34.000"	"27.000"	"0.00296647003175712"	"21"	"0.0003538"	"0.00667"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTSEFLNK"	"[K].SGTSEFLNk.[M]"	"K9(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"606.32440"	"1211.64153"	"1211.64693"	"-4.46"	"-0.00270"	"6/74"	"6"	"74"	"891627.309020996"	"HCD"	"MS2"	"14.99848"	"56.8"	"100.000"	"47.0862"	"14138"	"14138"	"14113"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"77.4"	""	"65.4"	""	"77.9"	""	"92.5"	""	"113.3"	"112.5"	""	"502"	"38"	"33.000"	"27.000"	"0.00367006470788636"	"20"	"0.006639"	"0.07416"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"606.33038"	"1211.65349"	"1211.65433"	"-0.69"	"-0.00042"	"6/58"	"6"	"58"	"488807.393615723"	"HCD"	"MS2"	"0"	"20.8"	"100.000"	"102.1820"	"35731"	"35731"	"35726"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.9"	""	"19.2"	""	"21.6"	""	"58.9"	"1.2"	"36.3"	"37.7"	""	"496"	"49"	"33.000"	"26.000"	"0.000315102378091719"	""	"0.001134"	"0.01389"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7843"	"0.0000"	"1"	"1"	"1"	"606.33044"	"1211.65361"	"1211.65433"	"-0.59"	"-0.00036"	"6/58"	"6"	"58"	"258017.938537598"	"HCD"	"MS2"	"20.47628"	"9.5"	"100.000"	"100.9429"	"35282"	"35282"	"35274"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.8"	""	"10.3"	""	"13.3"	""	"25.4"	""	"14.3"	"18.3"	""	"496"	"51"	"33.000"	"26.000"	"0.000184693529528685"	""	"0.001211"	"0.01403"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"606.33057"	"1211.65386"	"1211.65433"	"-0.39"	"-0.00024"	"6/58"	"6"	"58"	"521223.31842041"	"HCD"	"MS2"	"2.043318"	"22.3"	"100.000"	"102.2274"	"35685"	"35685"	"35682"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.1"	""	"23.9"	""	"19.3"	""	"72.8"	""	"38.8"	"33.4"	""	"496"	"49"	"33.000"	"26.000"	"0.000303006315720888"	""	"0.0008629"	"0.01095"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7925"	"0.0000"	"1"	"1"	"1"	"606.33057"	"1211.65386"	"1211.65433"	"-0.39"	"-0.00024"	"6/58"	"6"	"58"	"2163176.93835449"	"HCD"	"MS2"	"0.3368443"	"80.1"	"100.000"	"101.4575"	"35448"	"35448"	"35443"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.2"	""	"84.4"	""	"81.3"	""	"240.7"	"0.9"	"148.7"	"135.4"	""	"496"	"53"	"33.000"	"26.000"	"0.000123154895719683"	""	"0"	"0.003561"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"606.33069"	"1211.65410"	"1211.65433"	"-0.19"	"-0.00011"	"6/58"	"6"	"58"	"1621440.11206055"	"HCD"	"MS2"	"0"	"63.6"	"100.000"	"101.6564"	"35561"	"35561"	"35555"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.4"	""	"61.1"	""	"70.9"	""	"203.2"	"0.9"	"111.3"	"96.9"	""	"503"	"50"	"34.000"	"27.000"	"0.000270731001227903"	"26"	"0.0001301"	"0.004918"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7925"	"0.0000"	"1"	"1"	"1"	"606.33069"	"1211.65410"	"1211.65433"	"-0.19"	"-0.00011"	"6/58"	"6"	"58"	"3491239.63092041"	"HCD"	"MS2"	"0"	"129.6"	"100.000"	"101.9731"	"35617"	"35617"	"35612"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"115.4"	""	"142.5"	""	"137.2"	""	"421.1"	""	"214.6"	"198.1"	""	"503"	"53"	"34.000"	"27.000"	"0.000122613415261002"	"27"	"0"	"0.002079"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"606.33075"	"1211.65422"	"1211.65433"	"-0.09"	"-0.00005"	"6/58"	"6"	"58"	"152162.821105957"	"HCD"	"MS2"	"42.04229"	"7.2"	"100.000"	"100.8853"	"35308"	"35308"	"35303"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.5"	""	"9.2"	""	"8.5"	""	"16.9"	""	"13.8"	"14.0"	""	"503"	"30"	"34.000"	"27.000"	"0.0237978646083497"	"26"	"0.003111"	"0.03147"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"606.33081"	"1211.65434"	"1211.65433"	"0.01"	"0.00001"	"6/58"	"6"	"58"	"2347078.3260498"	"HCD"	"MS2"	"0.6160182"	"89.4"	"100.000"	"101.3980"	"35474"	"35474"	"35470"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"71.9"	""	"92.9"	""	"97.0"	""	"287.6"	""	"158.1"	"145.1"	""	"503"	"50"	"34.000"	"27.000"	"0.000277675772905371"	"26"	"0.0003538"	"0.007013"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7925"	"0.0000"	"1"	"1"	"1"	"606.33081"	"1211.65434"	"1211.65433"	"0.01"	"0.00001"	"6/58"	"6"	"58"	"3176110.86688232"	"HCD"	"MS2"	"0.2578263"	"120.9"	"100.000"	"101.1989"	"35363"	"35363"	"35356"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"111.5"	""	"126.7"	""	"136.6"	""	"377.6"	"0.1"	"193.4"	"199.4"	""	"503"	"53"	"34.000"	"27.000"	"0.00012489296884476"	"27"	"0.0003538"	"0.007349"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7719"	"0.0000"	"1"	"1"	"1"	"606.33087"	"1211.65447"	"1211.65433"	"0.11"	"0.00007"	"6/58"	"6"	"58"	"1827420.19134521"	"HCD"	"MS2"	"0"	"70.5"	"100.000"	"101.7203"	"35535"	"35535"	"35532"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.9"	""	"74.6"	""	"74.9"	""	"224.4"	"0.7"	"115.3"	"112.4"	""	"503"	"57"	"34.000"	"27.000"	"4.74829824297717E-05"	""	"0.0001301"	"0.004723"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7925"	"0.0000"	"1"	"1"	"1"	"606.33093"	"1211.65459"	"1211.65433"	"0.22"	"0.00013"	"6/58"	"6"	"58"	"3003440.30615234"	"HCD"	"MS2"	"0.5972455"	"106.4"	"100.000"	"101.1415"	"35390"	"35390"	"35387"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.7"	""	"114.7"	""	"103.0"	""	"332.9"	""	"188.6"	"170.8"	""	"503"	"53"	"34.000"	"27.000"	"0.000125469448596193"	"27"	"0.0003538"	"0.006762"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7925"	"0.0000"	"1"	"1"	"1"	"606.33105"	"1211.65483"	"1211.65433"	"0.42"	"0.00025"	"6/58"	"6"	"58"	"3513722.60491943"	"HCD"	"MS2"	"0"	"131.6"	"100.000"	"101.9174"	"35646"	"35646"	"35639"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"118.4"	""	"131.0"	"3.2"	"156.9"	""	"401.8"	""	"225.8"	"210.4"	""	"502"	"53"	"33.000"	"27.000"	"0.000124357997892002"	"27"	"0"	"0.00184"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLDVDLDR"	"[R].hLDVDLDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TSU1"	"Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Rattus norvegicus OX=10116 GN=Arfgef2 PE=1 SV=1"	"Q7TSU1"	"Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Rattus norvegicus OX=10116 GN=Arfgef2 PE=1 SV=1"	"0"	"3"	"3"	"0.7556"	"0.0000"	"1"	"1"	"1"	"404.55698"	"1211.65638"	"1211.65817"	"-1.48"	"-0.00060"	"6/64"	"6"	"64"	"1502956.32012939"	"HCD"	"MS2"	"15.41417"	"43.1"	"100.000"	"44.9898"	"13285"	"13285"	"13263"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.8"	""	"56.9"	""	"60.0"	""	"74.8"	""	"78.6"	"79.1"	""	"504"	"45"	"34.000"	"27.000"	"0.000743704725119929"	"27"	"0.0003538"	"0.006397"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLDVDLDR"	"[R].hLDVDLDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TSU1"	"Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Rattus norvegicus OX=10116 GN=Arfgef2 PE=1 SV=1"	"Q7TSU1"	"Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Rattus norvegicus OX=10116 GN=Arfgef2 PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"404.55740"	"1211.65766"	"1211.65817"	"-0.42"	"-0.00017"	"9/64"	"9"	"64"	"1325778.39813232"	"HCD"	"MS2"	"23.65825"	"40.7"	"100.000"	"44.9206"	"13268"	"13268"	"13241"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.6"	""	"44.5"	""	"58.5"	""	"68.0"	""	"82.0"	"80.0"	""	"497"	"26"	"33.000"	"26.000"	"0.0600242017359568"	"19"	"0.001374"	"0.01782"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WASEATYR"	"[R].wASEATYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"606.81415"	"1212.62102"	"1212.62105"	"-0.03"	"-0.00002"	"6/62"	"6"	"62"	"1946820.65063477"	"HCD"	"MS2"	"19.64174"	"103.7"	"100.000"	"48.1859"	"14598"	"14598"	"14578"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"153.2"	""	"167.6"	""	"120.1"	""	"169.8"	""	"187.4"	"191.0"	""	"473"	"34"	"33.000"	"26.000"	"0.00965675348676816"	"24"	"0.0001301"	"0.003987"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAIPAGEQAR"	"[R].aAIPAGEQAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIS8"	"Mitochondrial dynamics protein MID51 OS=Rattus norvegicus OX=10116 GN=Mief1 PE=1 SV=1"	"Q5XIS8"	"Mitochondrial dynamics protein MID51 OS=Rattus norvegicus OX=10116 GN=Mief1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"606.84875"	"1212.69023"	"1212.68980"	"0.36"	"0.00022"	"5/76"	"5"	"76"	"792307.406616211"	"HCD"	"MS2"	"25.33591"	"82.3"	"100.000"	"31.2820"	"7725"	"7725"	"7695"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"84.4"	""	"70.2"	""	"71.9"	""	"147.7"	""	"215.9"	"197.5"	""	"410"	"15"	"33.000"	"26.000"	"0.724025498073512"	"19"	"0.007686"	"0.0947"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFFSEVER"	"[R].aFFSEVER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"607.32343"	"1213.63957"	"1213.64145"	"-1.55"	"-0.00094"	"6/62"	"6"	"62"	"1220968.890625"	"HCD"	"MS2"	"0"	"68.9"	"100.000"	"70.9464"	"23828"	"23828"	"23809"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"98.2"	""	"83.6"	""	"87.4"	""	"117.0"	"0.7"	"124.9"	"141.5"	""	"427"	"33"	"33.000"	"26.000"	"0.0111788693211058"	"17"	"0"	"0.003365"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFFSEVER"	"[R].aFFSEVER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"607.32391"	"1213.64055"	"1213.64145"	"-0.74"	"-0.00045"	"6/62"	"6"	"62"	"1011828.625"	"HCD"	"MS2"	"30.95785"	"57.1"	"100.000"	"70.6453"	"23705"	"23705"	"23685"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.3"	""	"68.4"	""	"77.7"	""	"97.3"	"0.2"	"107.0"	"116.2"	""	"441"	"35"	"33.000"	"26.000"	"0.00769854395630282"	""	"0"	"0.002559"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFFSEVER"	"[R].aFFSEVER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"607.32391"	"1213.64055"	"1213.64145"	"-0.74"	"-0.00045"	"6/62"	"6"	"62"	"1237931.79553223"	"HCD"	"MS2"	"18.68886"	"66.3"	"100.000"	"70.8333"	"23768"	"23768"	"23749"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"89.8"	"1.7"	"78.5"	""	"89.3"	""	"114.3"	""	"125.4"	"134.1"	""	"441"	"35"	"33.000"	"26.000"	"0.00700500732578275"	""	"0"	"0.002597"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFFSEVER"	"[R].aFFSEVER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"607.32428"	"1213.64128"	"1213.64145"	"-0.14"	"-0.00009"	"6/62"	"6"	"62"	"912251.950256348"	"HCD"	"MS2"	"4.94886"	"47.0"	"100.000"	"71.1486"	"23897"	"23897"	"23877"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.8"	""	"54.9"	""	"60.1"	""	"76.5"	""	"96.7"	"91.8"	""	"438"	"21"	"33.000"	"26.000"	"0.185116067090103"	"21"	"0.001374"	"0.01677"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDTPHYPR"	"[R].vDTPHYPR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"405.22198"	"1213.65140"	"1213.65269"	"-1.06"	"-0.00043"	"7/58"	"7"	"58"	"2619618.1282959"	"HCD"	"MS2"	"13.15695"	"81.8"	"100.000"	"32.0444"	"8044"	"8044"	"8025"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.4"	""	"100.7"	""	"142.0"	""	"122.4"	""	"153.7"	"153.0"	""	"442"	"51"	"33.000"	"26.000"	"0.000195610549772615"	"19"	"0"	"0.001561"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDTPHYPR"	"[R].vDTPHYPR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"0"	"3"	"3"	"0.9464"	"0.0000"	"1"	"1"	"1"	"405.22214"	"1213.65186"	"1213.65269"	"-0.68"	"-0.00028"	"7/58"	"7"	"58"	"3076745.52307129"	"HCD"	"MS2"	"10.6163"	"95.7"	"100.000"	"31.7370"	"7920"	"7920"	"7897"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"137.0"	""	"121.9"	""	"133.0"	""	"156.8"	"3.2"	"172.9"	"182.0"	""	"457"	"56"	"33.000"	"26.000"	"6.17854486198871E-05"	"19"	"0"	"0.001726"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDTPHYPR"	"[R].vDTPHYPR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"405.22220"	"1213.65204"	"1213.65269"	"-0.53"	"-0.00022"	"7/58"	"7"	"58"	"3155840.7880249"	"HCD"	"MS2"	"10.08283"	"91.6"	"100.000"	"31.7697"	"7924"	"7924"	"7897"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"132.2"	""	"112.0"	""	"135.4"	""	"143.3"	""	"177.1"	"169.1"	""	"457"	"48"	"33.000"	"26.000"	"0.00033257239991298"	"18"	"0"	"0.001622"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDTPHYPR"	"[R].vDTPHYPR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"405.22244"	"1213.65277"	"1213.65269"	"0.07"	"0.00003"	"7/58"	"7"	"58"	"2635111.40460205"	"HCD"	"MS2"	"13.17303"	"88.1"	"100.000"	"32.0611"	"8043"	"8043"	"8022"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"115.7"	""	"112.3"	""	"139.8"	""	"127.9"	""	"173.7"	"172.5"	""	"448"	"51"	"33.000"	"26.000"	"0.000175488239979631"	"22"	"0"	"0.0007078"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLPVEEAGR"	"[K].nLPVEEAGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"607.33997"	"1213.67266"	"1213.67382"	"-0.96"	"-0.00058"	"7/82"	"7"	"82"	"7618125.7946167"	"HCD"	"MS2"	"6.920348"	"281.1"	"100.000"	"41.3112"	"11802"	"11802"	"11785"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"442.6"	""	"348.1"	""	"376.8"	""	"494.4"	""	"512.9"	"488.5"	""	"490"	"40"	"33.000"	"26.000"	"0.00221394121061964"	"24"	"0"	"0.0008473"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLPVEEAGR"	"[K].nLPVEEAGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"607.34027"	"1213.67327"	"1213.67382"	"-0.45"	"-0.00028"	"7/82"	"7"	"82"	"7379020.06365967"	"HCD"	"MS2"	"8.327674"	"276.1"	"100.000"	"41.4795"	"11861"	"11861"	"11848"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"475.2"	""	"354.6"	""	"362.6"	""	"496.6"	""	"464.4"	"460.9"	""	"484"	"40"	"33.000"	"26.000"	"0.00247067355057259"	"24"	"0"	"0.000805"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLPVEEAGR"	"[K].nLPVEEAGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"607.34039"	"1213.67351"	"1213.67382"	"-0.25"	"-0.00015"	"7/82"	"7"	"82"	"12733826.8850708"	"HCD"	"MS2"	"0"	"396.8"	"82.518"	"41.6077"	"11923"	"11923"	"11905"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"637.6"	""	"468.5"	""	"531.3"	""	"657.7"	""	"725.8"	"739.6"	""	"484"	"40"	"33.000"	"26.000"	"0.00218683172640797"	"23"	"0"	"0.000518"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLPVEEAGR"	"[K].nLPVEEAGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"607.34052"	"1213.67375"	"1213.67382"	"-0.05"	"-0.00003"	"7/82"	"7"	"82"	"10690975.3847046"	"HCD"	"MS2"	"3.621335"	"457.5"	"100.000"	"41.7877"	"11987"	"11987"	"11970"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"728.2"	""	"569.7"	""	"597.7"	""	"771.7"	"0.9"	"821.8"	"842.7"	""	"485"	"40"	"33.000"	"26.000"	"0.00227358786679526"	"23"	"0"	"0.0008201"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAGGQLASPR"	"[R].qAGGQLASPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P35248"	"Pulmonary surfactant-associated protein D OS=Rattus norvegicus OX=10116 GN=Sftpd PE=1 SV=1"	"P35248"	"Pulmonary surfactant-associated protein D OS=Rattus norvegicus OX=10116 GN=Sftpd PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"607.34540"	"1213.68352"	"1213.68505"	"-1.26"	"-0.00077"	"7/90"	"7"	"90"	"2815519.9309082"	"HCD"	"MS2"	"42.03725"	"127.7"	"100.000"	"25.8928"	"5537"	"5537"	"5513"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"146.4"	""	"121.8"	""	"299.9"	""	"178.3"	"1.2"	"223.1"	"237.6"	""	"490"	"45"	"33.000"	"26.000"	"0.000778334147309194"	"21"	"0"	"0.000106"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAGGQLASPR"	"[R].qAGGQLASPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P35248"	"Pulmonary surfactant-associated protein D OS=Rattus norvegicus OX=10116 GN=Sftpd PE=1 SV=1"	"P35248"	"Pulmonary surfactant-associated protein D OS=Rattus norvegicus OX=10116 GN=Sftpd PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"607.34570"	"1213.68413"	"1213.68505"	"-0.76"	"-0.00046"	"8/90"	"8"	"90"	"4722134.36315918"	"HCD"	"MS2"	"19.71089"	"192.0"	"100.000"	"25.8581"	"5538"	"5538"	"5512"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"234.8"	""	"210.4"	""	"313.1"	""	"327.2"	""	"357.1"	"380.4"	""	"490"	"39"	"33.000"	"26.000"	"0.00302110684141083"	"18"	"0"	"0.0002273"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNVQPELVS"	"[R].vNVQPELVS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08603"	"Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus OX=10116 GN=Rabggtb PE=1 SV=1"	"Q08603"	"Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus OX=10116 GN=Rabggtb PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"607.35327"	"1213.69927"	"1213.69897"	"0.25"	"0.00015"	"5/74"	"5"	"74"	"1023941.80212402"	"HCD"	"MS2"	"24.25139"	"21.2"	"100.000"	"80.1346"	"27537"	"27537"	"27526"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.0"	""	"22.3"	""	"29.7"	""	"34.0"	"1.2"	"38.8"	"34.4"	""	"479"	"27"	"33.000"	"26.000"	"0.0487871577610519"	"17"	"0.001374"	"0.01615"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNVQPELVS"	"[R].vNVQPELVS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08603"	"Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus OX=10116 GN=Rabggtb PE=1 SV=1"	"Q08603"	"Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus OX=10116 GN=Rabggtb PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"607.35364"	"1213.70000"	"1213.69897"	"0.85"	"0.00051"	"5/74"	"5"	"74"	"1037521.15332031"	"HCD"	"MS2"	"20.3044"	"21.7"	"100.000"	"80.1224"	"27529"	"27529"	"27514"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.8"	""	"29.4"	""	"29.9"	""	"36.7"	"1.2"	"36.0"	"42.5"	""	"479"	"29"	"33.000"	"26.000"	"0.0300819176304922"	"22"	"0.001211"	"0.0145"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAVDVSPLR"	"[R].qAVDVSPLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"607.35846"	"1213.70964"	"1213.71020"	"-0.46"	"-0.00028"	"6/84"	"6"	"84"	"5310785.92791748"	"HCD"	"MS2"	"11.76156"	"218.7"	"100.000"	"50.2189"	"15427"	"15427"	"15408"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"318.6"	""	"270.7"	""	"308.0"	""	"391.1"	""	"414.7"	"373.6"	""	"396"	"42"	"32.000"	"25.000"	"0.00117669847405883"	""	"0"	"0.000309"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAVDVSPLR"	"[R].qAVDVSPLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"607.35883"	"1213.71037"	"1213.71020"	"0.14"	"0.00009"	"6/84"	"6"	"84"	"3603886.68896484"	"HCD"	"MS2"	"47.63697"	"160.7"	"100.000"	"49.9245"	"15307"	"15307"	"15286"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"259.3"	""	"229.3"	""	"220.3"	""	"274.2"	""	"282.9"	"255.3"	""	"395"	"42"	"32.000"	"25.000"	"0.00139819292415867"	""	"0"	"0.0002551"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAVDVSPLR"	"[R].qAVDVSPLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"607.35919"	"1213.71111"	"1213.71020"	"0.75"	"0.00045"	"6/84"	"6"	"84"	"3842645.03344727"	"HCD"	"MS2"	"41.92266"	"168.8"	"100.000"	"50.2914"	"15445"	"15445"	"15422"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"276.5"	""	"245.3"	""	"223.7"	""	"281.5"	"0.1"	"299.6"	"270.8"	""	"422"	"38"	"33.000"	"26.000"	"0.00364991251794387"	"26"	"0"	"0.0004732"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAVDVSPLR"	"[R].qAVDVSPLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"607.35931"	"1213.71135"	"1213.71020"	"0.95"	"0.00057"	"6/84"	"6"	"84"	"4393305.71063232"	"HCD"	"MS2"	"9.827067"	"181.5"	"100.000"	"50.5950"	"15569"	"15569"	"15550"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"241.0"	""	"235.2"	""	"290.1"	""	"303.6"	""	"348.2"	"304.4"	""	"424"	"42"	"33.000"	"26.000"	"0.001371942345387"	""	"0"	"0.0003495"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDVGEAEPR"	"[K].iDVGEAEPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"607.83228"	"1214.65727"	"1214.65783"	"-0.46"	"-0.00028"	"7/74"	"7"	"74"	"1847951.54968262"	"HCD"	"MS2"	"12.80211"	"80.8"	"100.000"	"47.9696"	"14510"	"14510"	"14488"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"120.5"	""	"107.8"	""	"107.9"	""	"116.3"	"0.4"	"154.2"	"158.9"	""	"542"	"63"	"34.000"	"27.000"	"1.34576519113041E-05"	"25"	"0"	"9.027E-05"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDVGEAEPR"	"[K].iDVGEAEPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"607.83289"	"1214.65849"	"1214.65783"	"0.55"	"0.00033"	"7/74"	"7"	"74"	"1751662.68237305"	"HCD"	"MS2"	"0"	"73.5"	"100.000"	"48.3139"	"14638"	"14638"	"14619"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"107.8"	""	"94.1"	""	"103.7"	""	"118.9"	"0.7"	"135.8"	"135.5"	""	"540"	"49"	"34.000"	"27.000"	"0.000335246123049951"	"24"	"0"	"0.0007391"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGWPLDIR"	"[K].eGWPLDIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"607.83972"	"1214.67217"	"1214.67309"	"-0.76"	"-0.00046"	"4/66"	"4"	"66"	"264886.365539551"	"HCD"	"MS2"	"62.13646"	"15.8"	"100.000"	"88.9249"	"31002"	"31002"	"30983"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.1"	""	"19.8"	""	"25.6"	""	"21.2"	""	"27.3"	"29.5"	""	"576"	"21"	"34.000"	"27.000"	"0.21398951171425"	"19"	"0.009658"	"0.1272"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGWPLDIR"	"[K].eGWPLDIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"607.83978"	"1214.67229"	"1214.67309"	"-0.66"	"-0.00040"	"5/66"	"5"	"66"	"205487.146911621"	"HCD"	"MS2"	"36.71958"	"13.4"	"100.000"	"89.1681"	"31094"	"31094"	"31080"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.9"	""	"18.8"	""	"16.9"	""	"18.5"	""	"21.6"	"24.0"	""	"569"	"12"	"34.000"	"27.000"	"1.93233433479589"	"19"	"0.009363"	"0.122"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGPELELTR"	"[R].aGPELELTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3T1G7"	"Conserved oligomeric Golgi complex subunit 7 OS=Rattus norvegicus OX=10116 GN=Cog7 PE=2 SV=1"	"Q3T1G7"	"Conserved oligomeric Golgi complex subunit 7 OS=Rattus norvegicus OX=10116 GN=Cog7 PE=2 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"607.85046"	"1214.69365"	"1214.69422"	"-0.47"	"-0.00028"	"8/72"	"8"	"72"	"1333160.7277832"	"HCD"	"MS2"	"44.20902"	"62.5"	"100.000"	"55.3683"	"17525"	"17525"	"17495"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"83.6"	""	"77.2"	""	"80.9"	""	"102.5"	"2.1"	"121.4"	"125.2"	""	"504"	"27"	"34.000"	"27.000"	"0.0462807662523783"	"26"	"0.0006732"	"0.00882"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGPELELTR"	"[R].aGPELELTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3T1G7"	"Conserved oligomeric Golgi complex subunit 7 OS=Rattus norvegicus OX=10116 GN=Cog7 PE=2 SV=1"	"Q3T1G7"	"Conserved oligomeric Golgi complex subunit 7 OS=Rattus norvegicus OX=10116 GN=Cog7 PE=2 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"607.85120"	"1214.69512"	"1214.69422"	"0.74"	"0.00045"	"8/72"	"8"	"72"	"1464133.01928711"	"HCD"	"MS2"	"27.15102"	"77.0"	"100.000"	"55.6122"	"17610"	"17610"	"17586"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"99.3"	""	"93.2"	""	"111.7"	""	"132.0"	"0.7"	"140.1"	"152.5"	""	"512"	"24"	"34.000"	"27.000"	"0.0973284854580636"	""	"0.000936"	"0.01304"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPVMVAGGR"	"[R].sPPVmVAGGR.[V]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"608.33771"	"1215.66814"	"1215.67171"	"-2.94"	"-0.00179"	"8/72"	"8"	"72"	"1837251.41967773"	"HCD"	"MS2"	"9.389851"	"82.4"	"100.000"	"34.1357"	"8883"	"8883"	"8857"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.8"	""	"85.4"	""	"96.9"	""	"176.6"	"2.6"	"192.1"	"169.1"	""	"631"	"36"	"34.000"	"28.000"	"0.00822241445024651"	"22"	"0.008052"	"0.09768"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPEFSHR"	"[R].lTPEFSHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"0"	"3"	"3"	"0.4667"	"0.0000"	"1"	"1"	"1"	"405.89438"	"1215.66858"	"1215.66834"	"0.20"	"0.00008"	"8/64"	"8"	"64"	"1103905.15118408"	"HCD"	"MS2"	"65.07462"	"47.0"	"100.000"	"39.3107"	"10980"	"10980"	"10956"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.0"	""	"56.9"	""	"66.4"	""	"78.0"	"0.1"	"83.1"	"95.7"	""	"592"	"15"	"34.000"	"27.000"	"0.859590705721478"	"21"	"0.008668"	"0.1109"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPEEIER"	"[R].lTPEEIER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"608.34277"	"1215.67827"	"1215.67823"	"0.03"	"0.00002"	"7/66"	"7"	"66"	"3867964.99780273"	"HCD"	"MS2"	"9.408565"	"176.2"	"100.000"	"53.6209"	"16803"	"16803"	"16785"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"216.4"	"1.7"	"171.5"	""	"219.9"	""	"351.0"	""	"346.3"	"370.8"	""	"590"	"26"	"34.000"	"27.000"	"0.0775929057609137"	""	"0.008668"	"0.1083"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPEEIER"	"[R].lTPEEIER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"608.34283"	"1215.67839"	"1215.67823"	"0.13"	"0.00008"	"10/66"	"10"	"66"	"4379967.2902832"	"HCD"	"MS2"	"10.00823"	"203.7"	"100.000"	"53.3419"	"16701"	"16701"	"16684"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"271.0"	""	"199.2"	""	"250.4"	""	"390.6"	""	"399.7"	"425.1"	""	"590"	"28"	"34.000"	"27.000"	"0.0423469382839328"	""	"0.007413"	"0.08895"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLADQAEAR"	"[K].lLADQAEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"608.34784"	"1215.68840"	"1215.68947"	"-0.88"	"-0.00053"	"7/78"	"7"	"78"	"2732461.57366943"	"HCD"	"MS2"	"0"	"125.4"	"100.000"	"44.9855"	"13283"	"13283"	"13263"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"172.0"	""	"140.9"	""	"165.6"	""	"230.7"	""	"253.4"	"235.4"	""	"586"	"49"	"34.000"	"27.000"	"0.000399822859020555"	"26"	"0"	"0.000481"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLADQAEAR"	"[K].lLADQAEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"608.34790"	"1215.68852"	"1215.68947"	"-0.78"	"-0.00047"	"7/78"	"7"	"78"	"8545762.13354492"	"HCD"	"MS2"	"0"	"330.1"	"100.000"	"44.5435"	"13115"	"13115"	"13096"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"429.7"	""	"376.3"	""	"415.4"	""	"610.0"	""	"684.6"	"618.1"	""	"586"	"51"	"34.000"	"27.000"	"0.0002127490455285"	"26"	"0"	"0.0004522"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLADQAEAR"	"[K].lLADQAEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"608.34821"	"1215.68913"	"1215.68947"	"-0.27"	"-0.00017"	"7/78"	"7"	"78"	"8255449.94366455"	"HCD"	"MS2"	"0"	"316.8"	"100.000"	"44.6742"	"13156"	"13156"	"13139"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"423.9"	""	"355.8"	""	"394.7"	""	"581.9"	""	"654.5"	"600.1"	""	"574"	"51"	"34.000"	"27.000"	"0.000203648819405493"	"26"	"0"	"0.0004329"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLADQAEAR"	"[K].lLADQAEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"608.34839"	"1215.68950"	"1215.68947"	"0.03"	"0.00002"	"7/78"	"7"	"78"	"3689679.94885254"	"HCD"	"MS2"	"0"	"166.1"	"100.000"	"44.8217"	"13228"	"13228"	"13214"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"206.2"	""	"180.9"	""	"210.4"	""	"300.6"	""	"349.0"	"331.9"	""	"573"	"49"	"34.000"	"27.000"	"0.000341290835299843"	"24"	"0"	"0.000379"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVELPLR"	"[K].eMVELPLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"608.35126"	"1215.69524"	"1215.69686"	"-1.33"	"-0.00081"	"8/62"	"8"	"62"	"2254936.65765381"	"HCD"	"MS2"	"5.711515"	"84.1"	"100.000"	"81.1692"	"27954"	"27954"	"27940"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"127.7"	""	"119.6"	""	"131.0"	""	"114.8"	"3.7"	"146.4"	"153.3"	""	"599"	"27"	"34.000"	"27.000"	"0.0668954880737744"	"22"	"0.002379"	"0.02483"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVELPLR"	"[K].eMVELPLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"608.35168"	"1215.69609"	"1215.69686"	"-0.63"	"-0.00038"	"6/62"	"6"	"62"	"2135273.70245361"	"HCD"	"MS2"	"7.480839"	"81.9"	"100.000"	"81.2461"	"27986"	"27986"	"27974"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"117.4"	""	"104.6"	""	"134.6"	""	"117.7"	"2.4"	"152.4"	"146.6"	""	"578"	"19"	"34.000"	"27.000"	"0.366351389232917"	"21"	"0.002937"	"0.02753"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVELPLR"	"[K].eMVELPLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"608.35242"	"1215.69756"	"1215.69686"	"0.57"	"0.00035"	"6/62"	"6"	"62"	"1268978.56982422"	"HCD"	"MS2"	"27.5526"	"55.0"	"100.000"	"80.8946"	"27843"	"27843"	"27827"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.3"	""	"81.3"	""	"78.9"	""	"80.8"	""	"104.0"	"99.8"	""	"569"	"38"	"34.000"	"27.000"	"0.00479824335723097"	"24"	"0"	"0.002526"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVELPLR"	"[K].eMVELPLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"608.35260"	"1215.69792"	"1215.69686"	"0.87"	"0.00053"	"6/62"	"6"	"62"	"1402021.00610352"	"HCD"	"MS2"	"16.28246"	"57.7"	"100.000"	"80.9531"	"27868"	"27868"	"27852"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"83.5"	""	"70.4"	""	"89.8"	""	"88.0"	""	"112.6"	"106.3"	""	"567"	"34"	"34.000"	"27.000"	"0.0107041716127356"	"25"	"0.0002479"	"0.00542"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLANQTVGR"	"[KR].qLANQTVGR.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"Q99N37"	"Rho GTPase-activating protein 17 OS=Rattus norvegicus OX=10116 GN=Arhgap17 PE=1 SV=1"	"Q99N37; F1LQX4"	"Rho GTPase-activating protein 17 OS=Rattus norvegicus OX=10116 GN=Arhgap17 PE=1 SV=1; Rho GTPase-activating protein 44 OS=Rattus norvegicus OX=10116 GN=Arhgap44 PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"608.35352"	"1215.69975"	"1215.70070"	"-0.78"	"-0.00047"	"7/80"	"7"	"80"	"1610704.75396729"	"HCD"	"MS2"	"36.65699"	"92.7"	"100.000"	"29.7855"	"7118"	"7118"	"7091"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.8"	""	"103.8"	""	"104.6"	""	"157.0"	""	"204.3"	"208.0"	""	"565"	"34"	"34.000"	"27.000"	"0.0102805997705936"	"22"	"0"	"0.0006851"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSEVHTK"	"[R].gSEVHTk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"608.35828"	"1215.70928"	"1215.70976"	"-0.40"	"-0.00024"	"6/56"	"6"	"56"	"410164.673095703"	"HCD"	"MS2"	"0"	"34.5"	"100.000"	"20.8778"	"3511"	"3511"	"3499"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.1"	""	"59.6"	""	"51.5"	""	"34.2"	""	"66.8"	"76.0"	""	"626"	"27"	"34.000"	"27.000"	"0.0634664691210161"	"16"	"0.003967"	"0.04169"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPIDGK"	"[K].dIPIDGk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"0"	"2"	"2"	"0.6053"	"0.0000"	"1"	"1"	"1"	"608.37048"	"1215.73369"	"1215.73491"	"-1.00"	"-0.00061"	"6/56"	"6"	"56"	"1839272.85162354"	"HCD"	"MS2"	"0"	"123.0"	"100.000"	"59.6075"	"19252"	"19252"	"19243"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"205.8"	""	"186.7"	""	"142.4"	""	"196.1"	""	"242.8"	"198.4"	""	"654"	"38"	"35.000"	"28.000"	"0.00475935119350303"	""	"0.001886"	"0.02183"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPIDGK"	"[K].dIPIDGk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"608.37061"	"1215.73393"	"1215.73491"	"-0.80"	"-0.00049"	"6/56"	"6"	"56"	"1952241.47021484"	"HCD"	"MS2"	"0"	"130.7"	"100.000"	"59.8214"	"19326"	"19326"	"19313"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"210.2"	""	"193.8"	""	"137.9"	""	"205.4"	"1.7"	"264.8"	"224.8"	""	"650"	"35"	"35.000"	"28.000"	"0.0108114354820551"	""	"0.002467"	"0.02499"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDPIGK"	"[K].dLDPIGk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"608.37073"	"1215.73418"	"1215.73491"	"-0.60"	"-0.00037"	"6/52"	"6"	"52"	"657308.708251953"	"HCD"	"MS2"	"0"	"44.7"	"100.000"	"65.0098"	"21395"	"21395"	"21367"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.2"	""	"55.3"	""	"55.5"	""	"76.6"	"1.9"	"85.6"	"86.2"	""	"641"	"28"	"35.000"	"28.000"	"0.0467549970418249"	""	"0.003449"	"0.03347"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDPIGK"	"[K].dLDPIGk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"608.37085"	"1215.73442"	"1215.73491"	"-0.40"	"-0.00024"	"6/52"	"6"	"52"	"545003.890319824"	"HCD"	"MS2"	"20.90958"	"38.8"	"100.000"	"65.3693"	"21540"	"21540"	"21517"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.3"	""	"44.0"	""	"55.6"	""	"67.7"	""	"79.3"	"71.0"	""	"641"	"34"	"35.000"	"28.000"	"0.0133299350663334"	"28"	"0.001374"	"0.01718"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPLAVDK"	"[K].dPLAVDk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"608.37085"	"1215.73442"	"1215.73491"	"-0.40"	"-0.00024"	"6/58"	"6"	"58"	"2451633.05328369"	"HCD"	"MS2"	"31.6744"	"146.1"	"100.000"	"58.8558"	"18947"	"18947"	"18927"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"104.9"	""	"98.2"	""	"122.9"	""	"350.7"	""	"345.3"	"374.3"	""	"641"	"38"	"35.000"	"28.000"	"0.00506789996586158"	"23"	"0.001635"	"0.01966"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPELGVK"	"[R].dPELGVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"608.37085"	"1215.73442"	"1215.73491"	"-0.40"	"-0.00024"	"10/52"	"10"	"52"	"5559446.09503174"	"HCD"	"MS2"	"11.98913"	"355.6"	"100.000"	"52.9606"	"16534"	"16534"	"16517"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"462.0"	""	"418.4"	""	"416.2"	""	"665.9"	""	"753.8"	"666.2"	""	"641"	"26"	"35.000"	"28.000"	"0.0754793295488671"	""	"0.005067"	"0.05742"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDPIGK"	"[K].dLDPIGk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"608.37097"	"1215.73467"	"1215.73491"	"-0.20"	"-0.00012"	"6/52"	"6"	"52"	"741582.264465332"	"HCD"	"MS2"	"19.36724"	"53.1"	"100.000"	"64.9364"	"21380"	"21380"	"21358"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"76.2"	""	"65.5"	""	"67.1"	""	"90.9"	""	"95.1"	"109.2"	""	"640"	"28"	"35.000"	"28.000"	"0.0468975309105891"	""	"0.002973"	"0.03017"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPLAVDK"	"[K].dPLAVDk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"608.37097"	"1215.73467"	"1215.73491"	"-0.20"	"-0.00012"	"6/58"	"6"	"58"	"3708402.95007324"	"HCD"	"MS2"	"2.035484"	"232.0"	"100.000"	"59.3709"	"19143"	"19143"	"19126"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"120.4"	""	"139.7"	""	"188.4"	""	"543.9"	""	"588.9"	"641.1"	""	"640"	"38"	"35.000"	"28.000"	"0.00459356618673169"	"23"	"0.001728"	"0.02005"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDPIGK"	"[K].dLDPIGk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"608.37103"	"1215.73479"	"1215.73491"	"-0.10"	"-0.00006"	"9/52"	"9"	"52"	"579124.67791748"	"HCD"	"MS2"	"10.12104"	"43.6"	"100.000"	"65.2546"	"21509"	"21509"	"21485"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.4"	""	"42.6"	""	"58.9"	""	"74.8"	""	"89.6"	"87.7"	""	"640"	"28"	"35.000"	"28.000"	"0.0535981720328459"	"25"	"0.004205"	"0.04609"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDPEGK"	"[K].vLDPEGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04466"	"Myosin regulatory light chain 2, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Mylpf PE=1 SV=2"	"P04466"	"Myosin regulatory light chain 2, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Mylpf PE=1 SV=2"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"608.37103"	"1215.73479"	"1215.73491"	"-0.10"	"-0.00006"	"6/52"	"6"	"52"	"1435145.97540283"	"HCD"	"MS2"	"0"	"97.6"	"100.000"	"54.6848"	"17246"	"17246"	"17224"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.2"	""	"50.4"	""	"44.3"	""	"75.8"	""	"89.2"	"624.7"	""	"640"	"26"	"35.000"	"28.000"	"0.0776515230426373"	""	"0.003449"	"0.03545"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPELGVK"	"[R].dPELGVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"608.37103"	"1215.73479"	"1215.73491"	"-0.10"	"-0.00006"	"10/52"	"10"	"52"	"4834194.86218262"	"HCD"	"MS2"	"17.07109"	"322.1"	"100.000"	"52.6606"	"16423"	"16423"	"16408"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"417.0"	""	"365.6"	""	"397.9"	""	"624.4"	""	"639.9"	"613.8"	""	"640"	"26"	"35.000"	"28.000"	"0.0719697473867449"	""	"0.00447"	"0.04666"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPLAVDK"	"[K].dPLAVDk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"608.37109"	"1215.73491"	"1215.73491"	"0.00"	"0.00000"	"6/58"	"6"	"58"	"2281235.04382324"	"HCD"	"MS2"	"32.51997"	"141.1"	"100.000"	"59.0762"	"19022"	"19022"	"19000"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"102.6"	""	"94.7"	""	"122.1"	""	"328.0"	"0.1"	"342.9"	"355.3"	""	"640"	"38"	"35.000"	"28.000"	"0.00513038525020813"	"23"	"0.001374"	"0.01792"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPLAVDK"	"[K].dPLAVDk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"608.37115"	"1215.73503"	"1215.73491"	"0.10"	"0.00006"	"6/58"	"6"	"58"	"3625688.03063965"	"HCD"	"MS2"	"0.9390355"	"224.0"	"100.000"	"59.1593"	"19071"	"19071"	"19053"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"135.7"	""	"132.0"	""	"187.8"	""	"510.9"	""	"555.7"	"621.7"	""	"640"	"38"	"35.000"	"28.000"	"0.00470056408846037"	"23"	"0.002056"	"0.02256"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHLELFWSR"	"[R].EHLELFWSR.[V]"	""	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"406.20761"	"1216.60828"	"1216.61093"	"-2.18"	"-0.00088"	"7/78"	"7"	"78"	"715761.605529785"	"HCD"	"MS2"	"11.08114"	"11.8"	"100.000"	"70.2274"	"23535"	"23535"	"23512"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.7"	""	"13.7"	""	"21.3"	""	"19.4"	""	"21.7"	"19.5"	"NoQuanLabels"	"364"	"30"	"32.000"	"25.000"	"0.017950286638488"	"20"	"0.004942"	"0.05495"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGGAHLDFR"	"[R].nGGAHLDFR.[T]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"406.21335"	"1216.62549"	"1216.62720"	"-1.41"	"-0.00057"	"11/80"	"11"	"80"	"2302044.71478271"	"HCD"	"MS2"	"27.88526"	"60.8"	"100.000"	"40.4555"	"11447"	"11447"	"11426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"88.3"	""	"77.4"	""	"88.4"	""	"90.3"	""	"118.1"	"114.4"	""	"451"	"30"	"33.000"	"26.000"	"0.0222406024009838"	""	"0"	"0.002522"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGGAHLDFR"	"[R].nGGAHLDFR.[T]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"406.21378"	"1216.62677"	"1216.62720"	"-0.35"	"-0.00014"	"7/80"	"7"	"80"	"2267656.22045898"	"HCD"	"MS2"	"32.5827"	"60.9"	"100.000"	"40.2272"	"11363"	"11363"	"11336"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.6"	""	"70.4"	""	"73.6"	""	"102.2"	""	"114.4"	"129.7"	""	"457"	"46"	"33.000"	"26.000"	"0.000539369276281762"	"25"	"0"	"0.0004884"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEGQLGAAER"	"[K].gEGQLGAAER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"608.82770"	"1216.64812"	"1216.64833"	"-0.17"	"-0.00011"	"8/98"	"8"	"98"	"1904270.91571045"	"HCD"	"MS2"	"0"	"98.6"	"100.000"	"26.8493"	"5940"	"5940"	"5910"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"172.5"	""	"115.3"	""	"141.2"	""	"145.6"	"1.6"	"186.4"	"171.4"	""	"593"	"47"	"34.000"	"27.000"	"0.00055465725461846"	"23"	"0"	"3.495E-05"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEGDAAALNR"	"[K].aEGDAAALNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"608.82782"	"1216.64836"	"1216.64833"	"0.03"	"0.00002"	"8/78"	"8"	"78"	"1736506.67010498"	"HCD"	"MS2"	"44.90954"	"109.2"	"100.000"	"30.3542"	"7361"	"7361"	"7337"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"152.1"	""	"115.1"	""	"117.5"	""	"199.5"	"0.9"	"213.5"	"237.7"	""	"592"	"42"	"34.000"	"27.000"	"0.00208109406685615"	"21"	"0"	"0.0001134"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEGDAAALNR"	"[K].aEGDAAALNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"608.82788"	"1216.64849"	"1216.64833"	"0.13"	"0.00008"	"9/78"	"9"	"78"	"1269775.65447998"	"HCD"	"MS2"	"26.63907"	"79.3"	"100.000"	"30.4302"	"7380"	"7380"	"7357"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"106.5"	""	"88.4"	""	"89.0"	""	"148.3"	""	"151.2"	"169.5"	""	"591"	"35"	"34.000"	"27.000"	"0.00932303866207203"	"22"	"0"	"0.0001167"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEGQLGAAER"	"[K].gEGQLGAAER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"608.82800"	"1216.64873"	"1216.64833"	"0.33"	"0.00020"	"8/98"	"8"	"98"	"1827959.58959961"	"HCD"	"MS2"	"0"	"100.4"	"100.000"	"26.9095"	"5948"	"5948"	"5921"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"165.0"	""	"108.6"	""	"150.1"	""	"158.2"	""	"181.9"	"193.4"	""	"583"	"46"	"34.000"	"27.000"	"0.000733902824441706"	"20"	"0"	"7.271E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELEQER"	"[R].aLELEQER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"608.83862"	"1216.66997"	"1216.67348"	"-2.89"	"-0.00176"	"11/68"	"11"	"68"	"2807103.22991943"	"HCD"	"MS2"	"21.30453"	"141.6"	"100.000"	"47.1299"	"14156"	"14156"	"14129"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"184.1"	"2.7"	"152.7"	""	"154.1"	""	"271.1"	""	"304.2"	"277.5"	""	"653"	"20"	"35.000"	"28.000"	"0.338753027764581"	""	"0.00447"	"0.04725"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELEQER"	"[R].aLELEQER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"608.83899"	"1216.67070"	"1216.67348"	"-2.29"	"-0.00139"	"7/68"	"7"	"68"	"5264824.11791992"	"HCD"	"MS2"	"11.66036"	"228.2"	"100.000"	"46.9214"	"14082"	"14082"	"14062"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"336.7"	"3.3"	"238.8"	""	"251.7"	""	"424.0"	""	"478.1"	"437.1"	""	"650"	"33"	"35.000"	"28.000"	"0.0172537444375071"	""	"0.0008629"	"0.009989"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELEQER"	"[R].aLELEQER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.2647"	"0.0000"	"1"	"1"	"1"	"608.83978"	"1216.67229"	"1216.67348"	"-0.98"	"-0.00060"	"6/68"	"6"	"68"	"27346078.9853516"	"HCD"	"MS2"	"0.6646834"	"405.0"	"34.907"	"47.2250"	"14207"	"14207"	"14190"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"565.4"	""	"384.8"	""	"426.2"	""	"747.5"	""	"856.2"	"870.3"	""	"713"	"34"	"35.000"	"28.000"	"0.0127074829066456"	""	"0.001211"	"0.01509"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELEQER"	"[R].aLELEQER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"608.84052"	"1216.67375"	"1216.67348"	"0.22"	"0.00014"	"6/68"	"6"	"68"	"3061102.10455322"	"HCD"	"MS2"	"4.399281"	"160.2"	"100.000"	"47.7145"	"14395"	"14395"	"14381"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"214.3"	""	"168.0"	""	"183.0"	""	"284.1"	""	"322.7"	"350.6"	""	"716"	"24"	"35.000"	"28.000"	"0.131184651723924"	""	"0.001374"	"0.01717"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELEQER"	"[R].aLELEQER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.2812"	"0.0000"	"1"	"1"	"1"	"608.84082"	"1216.67436"	"1216.67348"	"0.72"	"0.00044"	"7/68"	"7"	"68"	"30245718.6334229"	"HCD"	"MS2"	"0.4383808"	"427.4"	"35.261"	"47.4176"	"14274"	"14274"	"14257"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"583.4"	""	"402.2"	""	"459.2"	""	"777.0"	""	"909.1"	"938.2"	""	"762"	"32"	"35.000"	"28.000"	"0.0236551102041654"	""	"0.000936"	"0.01184"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAAVDELR"	"[R].lTAAVDELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"2"	"2"	"0.4035"	"0.0000"	"1"	"1"	"1"	"608.85809"	"1216.70891"	"1216.70987"	"-0.79"	"-0.00048"	"8/74"	"8"	"74"	"1511212.34521484"	"HCD"	"MS2"	"3.843587"	"66.1"	"100.000"	"73.8627"	"25015"	"25015"	"25000"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"112.4"	""	"97.4"	""	"108.9"	""	"78.9"	""	"117.4"	"114.3"	""	"909"	"57"	"36.000"	"29.000"	"9.45222144288629E-05"	""	"0"	"0.0001587"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAAVDELR"	"[R].lTAAVDELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"2"	"2"	"0.5893"	"0.0000"	"1"	"1"	"1"	"608.85834"	"1216.70940"	"1216.70987"	"-0.39"	"-0.00023"	"13/74"	"13"	"74"	"1562980.0512085"	"HCD"	"MS2"	"5.231566"	"68.6"	"100.000"	"73.5696"	"24895"	"24895"	"24882"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"125.0"	""	"109.4"	""	"100.0"	""	"97.8"	""	"106.2"	"113.8"	""	"828"	"56"	"36.000"	"29.000"	"9.84011878662698E-05"	""	"0"	"0.0002145"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAAVDELR"	"[R].lTAAVDELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"2"	"2"	"0.5893"	"0.0000"	"1"	"1"	"1"	"608.85834"	"1216.70940"	"1216.70987"	"-0.39"	"-0.00023"	"13/74"	"13"	"74"	"1247126.21081543"	"HCD"	"MS2"	"0"	"56.4"	"100.000"	"73.6725"	"24924"	"24924"	"24905"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"114.4"	""	"84.3"	""	"76.4"	""	"68.6"	""	"104.0"	"88.6"	""	"828"	"56"	"36.000"	"29.000"	"0.00010162494910936"	""	"0"	"0.0002729"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAAVDELR"	"[R].lTAAVDELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"2"	"2"	"0.5893"	"0.0000"	"1"	"1"	"1"	"608.85834"	"1216.70940"	"1216.70987"	"-0.39"	"-0.00023"	"13/74"	"13"	"74"	"1889780.48809814"	"HCD"	"MS2"	"0.8488798"	"83.6"	"100.000"	"73.9586"	"25041"	"25041"	"25024"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"157.7"	""	"120.9"	""	"124.3"	""	"107.8"	""	"147.0"	"137.0"	""	"828"	"56"	"36.000"	"29.000"	"9.77237988536758E-05"	""	"0"	"0.0003756"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGSGMNMGR"	"[R].fGSGmNmGR.[I]"	"N-Term(TMT6plex); M5(Oxidation); M7(Oxidation)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"609.28302"	"1217.55876"	"1217.56044"	"-1.38"	"-0.00084"	"8/70"	"8"	"70"	"1244659.78283691"	"HCD"	"MS2"	"0"	"49.9"	"100.000"	"25.3668"	"5338"	"5338"	"5313"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.8"	""	"50.5"	""	"64.4"	""	"123.7"	""	"94.1"	"87.8"	""	"180"	"20"	"29.000"	"22.000"	"0.0847700636870557"	"15"	"0.008522"	"0.1055"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGSGMNMGR"	"[R].fGSGmNmGR.[I]"	"N-Term(TMT6plex); M5(Oxidation); M7(Oxidation)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"609.28326"	"1217.55925"	"1217.56044"	"-0.98"	"-0.00060"	"8/70"	"8"	"70"	"1277472.44598389"	"HCD"	"MS2"	"0"	"49.9"	"100.000"	"25.4223"	"5346"	"5346"	"5318"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.3"	""	"52.9"	""	"58.5"	""	"122.5"	"1.7"	"99.0"	"78.5"	""	"180"	"22"	"29.000"	"22.000"	"0.0634223762070432"	"15"	"0.005921"	"0.06764"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTNAYSR"	"[R].yLTnAYSR.[D]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"609.32123"	"1217.63518"	"1217.63637"	"-0.98"	"-0.00059"	"6/72"	"6"	"72"	"1858039.50695801"	"HCD"	"MS2"	"18.23973"	"103.2"	"100.000"	"48.6532"	"14789"	"14789"	"14767"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"151.8"	""	"120.7"	""	"125.6"	""	"159.4"	""	"219.9"	"203.1"	""	"588"	"35"	"34.000"	"27.000"	"0.0096682379477539"	"19"	"0.0001301"	"0.003912"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTNAYSR"	"[R].yLTnAYSR.[D]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"609.32129"	"1217.63530"	"1217.63637"	"-0.88"	"-0.00053"	"6/72"	"6"	"72"	"1566434.5680542"	"HCD"	"MS2"	"9.973069"	"90.7"	"100.000"	"48.9834"	"14911"	"14911"	"14888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"120.2"	""	"113.8"	""	"115.5"	""	"142.4"	""	"183.0"	"187.5"	""	"591"	"35"	"34.000"	"27.000"	"0.00890343280146999"	"23"	"0"	"0.003583"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIEVDDER"	"[K].lIEVDDER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"609.33209"	"1217.65691"	"1217.65750"	"-0.48"	"-0.00029"	"5/64"	"5"	"64"	"3455678.50415039"	"HCD"	"MS2"	"39.3885"	"176.5"	"100.000"	"56.9853"	"18184"	"18184"	"18163"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"291.1"	""	"207.4"	""	"242.9"	""	"311.6"	"3.3"	"314.1"	"300.3"	""	"723"	"39"	"35.000"	"28.000"	"0.00471094790410506"	"27"	"0.0001301"	"0.00482"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIEVDDER"	"[K].lIEVDDER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"609.33228"	"1217.65727"	"1217.65750"	"-0.18"	"-0.00011"	"5/64"	"5"	"64"	"3201754.86065674"	"HCD"	"MS2"	"38.96874"	"178.0"	"100.000"	"57.1646"	"18243"	"18243"	"18222"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"310.0"	""	"221.5"	""	"229.9"	""	"333.1"	""	"291.2"	"299.7"	""	"723"	"36"	"35.000"	"28.000"	"0.00988799644559876"	"26"	"0.0001301"	"0.004516"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVSPTSQR"	"[R].vDVSPTSQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"609.33698"	"1217.66667"	"1217.66873"	"-1.69"	"-0.00103"	"6/76"	"6"	"76"	"7769059.84008789"	"HCD"	"MS2"	"0"	"323.7"	"100.000"	"33.0048"	"8434"	"8434"	"8411"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"675.9"	""	"504.3"	""	"520.8"	""	"394.4"	""	"460.4"	"499.7"	""	"738"	"35"	"35.000"	"28.000"	"0.0112208657447455"	"20"	"0"	"0.001264"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVSPTSQR"	"[R].vDVSPTSQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"609.33722"	"1217.66716"	"1217.66873"	"-1.29"	"-0.00078"	"6/76"	"6"	"76"	"6711442.43682861"	"HCD"	"MS2"	"0"	"267.0"	"100.000"	"33.0118"	"8430"	"8430"	"8413"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"545.7"	""	"425.0"	""	"418.8"	""	"333.8"	""	"400.1"	"397.7"	""	"751"	"39"	"35.000"	"28.000"	"0.00425216336394952"	"24"	"0"	"0.0008341"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVSPTSQR"	"[R].vDVSPTSQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"609.33752"	"1217.66777"	"1217.66873"	"-0.79"	"-0.00048"	"6/76"	"6"	"76"	"6547721.26776123"	"HCD"	"MS2"	"0"	"273.7"	"100.000"	"33.2964"	"8553"	"8553"	"8536"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"526.5"	""	"400.4"	""	"418.6"	""	"350.2"	""	"442.9"	"450.3"	""	"751"	"37"	"35.000"	"28.000"	"0.00697605572886932"	"22"	"0"	"0.0014"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVSPTSQR"	"[R].vDVSPTSQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"609.33771"	"1217.66814"	"1217.66873"	"-0.49"	"-0.00030"	"6/76"	"6"	"76"	"7923847.934021"	"HCD"	"MS2"	"0"	"275.4"	"83.287"	"33.2966"	"8546"	"8546"	"8528"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"532.3"	""	"417.4"	""	"459.0"	""	"339.9"	""	"414.1"	"439.5"	""	"733"	"36"	"35.000"	"28.000"	"0.00988721501991064"	"27"	"0"	"0.0008606"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEALDANSR"	"[R].lEALDANSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"0"	"2"	"2"	"0.7547"	"0.0000"	"1"	"1"	"1"	"609.33789"	"1217.66850"	"1217.66873"	"-0.19"	"-0.00011"	"7/80"	"7"	"80"	"3609965.82775879"	"HCD"	"MS2"	"2.087673"	"172.8"	"100.000"	"51.4504"	"15928"	"15928"	"15909"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"244.5"	""	"178.3"	""	"201.6"	""	"324.0"	"3.6"	"340.8"	"346.6"	""	"733"	"53"	"35.000"	"28.000"	"0.000165605203613409"	""	"0"	"0.000381"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEALDANSR"	"[R].lEALDANSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"609.33795"	"1217.66863"	"1217.66873"	"-0.09"	"-0.00005"	"7/80"	"7"	"80"	"4144964.6585083"	"HCD"	"MS2"	"0"	"196.8"	"100.000"	"51.7990"	"16060"	"16060"	"16043"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"257.6"	""	"194.4"	""	"230.6"	""	"378.6"	"9.3"	"401.7"	"395.9"	""	"733"	"51"	"35.000"	"28.000"	"0.000281886306365042"	""	"0"	"0.0007451"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEDPAK"	"[K].aEEDPAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"609.34320"	"1217.67912"	"1217.67779"	"1.10"	"0.00067"	"6/52"	"6"	"52"	"1691042.28063965"	"HCD"	"MS2"	"20.32614"	"136.5"	"100.000"	"28.5087"	"6599"	"6599"	"6569"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"156.1"	""	"126.8"	""	"156.5"	""	"250.1"	""	"311.7"	"299.9"	""	"801"	"28"	"36.000"	"29.000"	"0.0672361009258085"	""	"0.004069"	"0.04457"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEDPAK"	"[K].aEEDPAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"609.34546"	"1217.68364"	"1217.67779"	"4.81"	"0.00293"	"10/52"	"10"	"52"	"1745879.98278809"	"HCD"	"MS2"	"32.16243"	"140.2"	"100.000"	"28.4189"	"6576"	"6576"	"6550"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"181.5"	""	"138.3"	""	"166.0"	""	"261.0"	""	"288.1"	"298.0"	""	"883"	"25"	"36.000"	"29.000"	"0.13929345412199"	"26"	"0.006769"	"0.07688"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEALDANSR"	"[R].lEALDANSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"0"	"2"	"2"	"0.1154"	"0.0000"	"1"	"1"	"1"	"609.34552"	"1217.68376"	"1217.66873"	"12.34"	"0.00752"	"8/80"	"8"	"80"	"1506196.79663086"	"HCD"	"MS2"	"55.727"	"84.1"	"100.000"	"51.8484"	"16091"	"16091"	"16069"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"110.0"	""	"83.8"	""	"101.6"	""	"160.5"	"1.8"	"161.4"	"179.1"	""	"883"	"26"	"36.000"	"29.000"	"0.124145421662113"	""	"0.002379"	"0.0247"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILEESLR"	"[R].eILEESLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.5745"	"0.0000"	"1"	"1"	"1"	"609.35028"	"1217.69328"	"1217.69388"	"-0.49"	"-0.00030"	"12/66"	"12"	"66"	"1509744.48828125"	"HCD"	"MS2"	"5.426118"	"71.6"	"100.000"	"66.7024"	"22099"	"22099"	"22077"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.3"	""	"88.8"	""	"100.0"	""	"122.1"	"2.6"	"134.1"	"127.9"	""	"867"	"47"	"36.000"	"29.000"	"0.00082411743434675"	""	"0"	"0.002417"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILEESLR"	"[R].eILEESLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.5526"	"0.0000"	"1"	"1"	"1"	"609.35040"	"1217.69353"	"1217.69388"	"-0.29"	"-0.00018"	"6/66"	"6"	"66"	"1533134.10754395"	"HCD"	"MS2"	"0"	"72.1"	"100.000"	"66.7982"	"22123"	"22123"	"22100"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"111.6"	""	"87.7"	""	"98.0"	""	"125.6"	"0.5"	"128.0"	"131.1"	""	"867"	"38"	"36.000"	"29.000"	"0.00756813903291038"	""	"0.0002479"	"0.005816"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILEESLR"	"[R].eILEESLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.6739"	"0.0000"	"1"	"1"	"1"	"609.35052"	"1217.69377"	"1217.69388"	"-0.09"	"-0.00006"	"6/66"	"6"	"66"	"5156538.73565674"	"HCD"	"MS2"	"11.01304"	"204.0"	"100.000"	"66.9997"	"22221"	"22221"	"22204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"295.5"	""	"267.9"	""	"270.0"	""	"342.8"	""	"390.9"	"367.9"	""	"867"	"46"	"36.000"	"29.000"	"0.00115608323107006"	""	"0"	"0.003312"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILEESLR"	"[R].eILEESLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.6809"	"0.0000"	"1"	"1"	"1"	"609.35059"	"1217.69390"	"1217.69388"	"0.01"	"0.00001"	"12/66"	"12"	"66"	"4725405.12109375"	"HCD"	"MS2"	"8.906697"	"193.2"	"100.000"	"67.0978"	"22245"	"22245"	"22226"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"293.9"	""	"240.5"	""	"271.6"	""	"315.3"	""	"358.8"	"350.5"	""	"867"	"47"	"36.000"	"29.000"	"0.000839438921370853"	""	"0"	"0.003303"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAINEVVTR"	"[R].sAINEVVTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"609.35492"	"1217.70256"	"1217.70512"	"-2.10"	"-0.00128"	"7/88"	"7"	"88"	"9750321.25860596"	"HCD"	"MS2"	"14.58117"	"423.1"	"100.000"	"43.8621"	"12841"	"12841"	"12825"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"526.9"	""	"555.8"	""	"633.3"	""	"764.1"	"1.7"	"836.9"	"691.6"	""	"846"	"45"	"36.000"	"29.000"	"0.00124262580277973"	"23"	"0"	"0.001087"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAINEVVTR"	"[R].sAINEVVTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"609.35516"	"1217.70305"	"1217.70512"	"-1.70"	"-0.00103"	"7/88"	"7"	"88"	"9270464.19274902"	"HCD"	"MS2"	"17.27861"	"384.0"	"100.000"	"43.9821"	"12879"	"12879"	"12865"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"492.2"	""	"549.6"	""	"586.4"	""	"666.0"	""	"745.5"	"600.0"	""	"841"	"46"	"36.000"	"29.000"	"0.000969987192856789"	"26"	"0"	"0.0005313"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAINEVVTR"	"[R].sAINEVVTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"609.35529"	"1217.70329"	"1217.70512"	"-1.50"	"-0.00091"	"7/88"	"7"	"88"	"4921063.53674316"	"HCD"	"MS2"	"34.38333"	"255.0"	"100.000"	"44.1608"	"12963"	"12963"	"12945"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"366.3"	""	"336.3"	""	"361.0"	""	"419.2"	"0.9"	"480.7"	"451.6"	""	"854"	"20"	"36.000"	"29.000"	"0.440989120260117"	"28"	"0.0001301"	"0.004745"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAINEVVTR"	"[R].sAINEVVTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"0"	"2"	"2"	"0.1333"	"0.0000"	"1"	"1"	"1"	"609.35565"	"1217.70403"	"1217.70512"	"-0.89"	"-0.00054"	"7/88"	"7"	"88"	"4777309.28289795"	"HCD"	"MS2"	"42.27356"	"239.8"	"100.000"	"44.3078"	"13008"	"13008"	"12987"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"321.5"	""	"320.5"	""	"335.6"	""	"402.9"	""	"466.3"	"429.3"	""	"856"	"15"	"36.000"	"29.000"	"1.29551894722736"	"26"	"0.001211"	"0.01521"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVNDIK"	"[K].nGVNDIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"609.36627"	"1217.72527"	"1217.72541"	"-0.12"	"-0.00007"	"6/60"	"6"	"60"	"1066002.6295166"	"HCD"	"MS2"	"0"	"96.5"	"100.000"	"38.5189"	"10666"	"10666"	"10645"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"137.5"	""	"124.5"	""	"133.4"	""	"162.6"	"2.8"	"171.3"	"181.8"	""	"779"	"32"	"35.000"	"28.000"	"0.0221058623806629"	""	"0.002973"	"0.03"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVNDIK"	"[K].nGVNDIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"609.36646"	"1217.72563"	"1217.72541"	"0.19"	"0.00011"	"6/60"	"6"	"60"	"727227.432250977"	"HCD"	"MS2"	"15.72378"	"67.6"	"100.000"	"38.7566"	"10754"	"10754"	"10725"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.0"	""	"86.2"	""	"85.7"	""	"115.6"	"0.4"	"122.0"	"127.9"	""	"779"	"28"	"35.000"	"28.000"	"0.0659944573274233"	""	"0.00447"	"0.04712"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLSADQWR"	"[R].nLSADQWR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"609.82501"	"1218.64275"	"1218.64285"	"-0.08"	"-0.00005"	"6/74"	"6"	"74"	"1261986.71710205"	"HCD"	"MS2"	"8.389533"	"72.2"	"100.000"	"51.3035"	"15857"	"15857"	"15839"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"108.3"	""	"87.5"	""	"86.0"	""	"120.6"	""	"142.6"	"140.0"	""	"684"	"36"	"35.000"	"28.000"	"0.00776293779344267"	"26"	"0.0001301"	"0.004908"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIFTPTNQIR"	"[M].sIFTPTNQIR.[L]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"609.82684"	"1218.64641"	"1218.64771"	"-1.07"	"-0.00065"	"6/88"	"6"	"88"	"419614.361450195"	"HCD"	"MS2"	"22.97524"	"9.0"	"100.000"	"85.5017"	"29667"	"29667"	"29654"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.4"	""	"10.4"	""	"15.7"	""	"14.7"	""	"15.1"	"16.6"	"NoQuanLabels"	"705"	"32"	"35.000"	"28.000"	"0.0231291206371774"	"19"	"0.001546"	"0.01889"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIFTPTNQIR"	"[M].sIFTPTNQIR.[L]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"609.82715"	"1218.64702"	"1218.64771"	"-0.57"	"-0.00035"	"7/88"	"7"	"88"	"1754595.14953613"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"85.7955"	"29779"	"29779"	"29768"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.4"	""	"6.9"	""	"8.3"	""	"11.0"	""	"10.2"	"12.3"	"NoQuanLabels"	"716"	"60"	"35.000"	"28.000"	"3.28006935463676E-05"	"24"	"0"	"0.002999"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIFTPTNQIR"	"[M].sIFTPTNQIR.[L]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"609.82721"	"1218.64714"	"1218.64771"	"-0.47"	"-0.00029"	"7/88"	"7"	"88"	"1748425.91790771"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"85.8422"	"29798"	"29798"	"29788"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.8"	""	"7.0"	""	"6.0"	""	"11.5"	""	"9.1"	"13.0"	"NoQuanLabels"	"716"	"57"	"35.000"	"28.000"	"6.62038165594152E-05"	"25"	"0"	"0.001885"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIFTPTNQIR"	"[M].sIFTPTNQIR.[L]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"609.82733"	"1218.64739"	"1218.64771"	"-0.27"	"-0.00016"	"7/88"	"7"	"88"	"548771.875244141"	"HCD"	"MS2"	"6.941648"	"8.4"	"100.000"	"85.5743"	"29694"	"29694"	"29685"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.3"	""	"10.1"	""	"8.4"	"2.0"	"15.3"	""	"12.7"	"17.9"	"NoQuanLabels"	"716"	"45"	"35.000"	"28.000"	"0.00115846529180807"	"23"	"0.0001301"	"0.003964"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAWISDIR"	"[R].eAWISDIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"2"	"2"	"0.4634"	"0.0000"	"1"	"1"	"1"	"609.83661"	"1218.66594"	"1218.66800"	"-1.69"	"-0.00103"	"6/66"	"6"	"66"	"942177.516357422"	"HCD"	"MS2"	"43.38288"	"34.2"	"100.000"	"76.2647"	"25980"	"25980"	"25961"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"64.9"	""	"42.7"	""	"44.5"	""	"53.5"	""	"60.4"	"60.1"	""	"843"	"41"	"36.000"	"29.000"	"0.0034657527695269"	""	"0.0001301"	"0.004341"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAWISDIR"	"[R].eAWISDIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"2"	"2"	"0.1071"	"0.0000"	"1"	"1"	"1"	"609.83734"	"1218.66741"	"1218.66800"	"-0.49"	"-0.00030"	"5/66"	"5"	"66"	"761219.327758789"	"HCD"	"MS2"	"47.32977"	"31.2"	"100.000"	"76.3997"	"26026"	"26026"	"26008"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.6"	""	"43.7"	""	"40.0"	""	"50.2"	"0.2"	"55.4"	"52.8"	""	"843"	"28"	"36.000"	"29.000"	"0.0603667199543798"	""	"0.001374"	"0.01795"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLETTER"	"[R].lQLETTER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4848"	"0.0000"	"1"	"1"	"1"	"609.84760"	"1218.68791"	"1218.68913"	"-1.00"	"-0.00061"	"6/74"	"6"	"74"	"3237142.53131104"	"HCD"	"MS2"	"19.88359"	"163.1"	"100.000"	"47.5885"	"14355"	"14355"	"14333"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"245.0"	""	"192.5"	""	"223.4"	""	"229.5"	"2.7"	"322.5"	"331.5"	""	"839"	"33"	"36.000"	"29.000"	"0.0192633566385066"	""	"0.0008629"	"0.01072"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLETTER"	"[R].lQLETTER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"609.84778"	"1218.68828"	"1218.68913"	"-0.70"	"-0.00043"	"6/74"	"6"	"74"	"2807920.49273682"	"HCD"	"MS2"	"15.40005"	"152.2"	"100.000"	"47.8319"	"14443"	"14443"	"14426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"218.4"	""	"203.2"	""	"210.3"	""	"221.0"	"2.9"	"279.5"	"307.8"	""	"841"	"32"	"36.000"	"29.000"	"0.0286923420886572"	"26"	"0.0008629"	"0.01057"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDGPSGK"	"[K].tVDGPSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.1600"	"0.0000"	"1"	"1"	"1"	"609.85706"	"1218.70683"	"1218.70942"	"-2.12"	"-0.00129"	"6/66"	"6"	"66"	"1494750.7734375"	"HCD"	"MS2"	"30.9838"	"108.1"	"100.000"	"31.2383"	"7707"	"7707"	"7679"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"181.3"	""	"126.9"	""	"131.4"	""	"179.3"	""	"180.7"	"227.2"	""	"787"	"25"	"35.000"	"28.000"	"0.113748253371081"	""	"0.004542"	"0.04926"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDGPSGK"	"[K].tVDGPSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.4865"	"0.0000"	"1"	"1"	"1"	"609.85742"	"1218.70757"	"1218.70942"	"-1.52"	"-0.00093"	"6/66"	"6"	"66"	"3164498.03369141"	"HCD"	"MS2"	"27.28185"	"215.0"	"100.000"	"31.9802"	"8018"	"8018"	"7999"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"352.8"	""	"287.8"	""	"295.8"	""	"298.1"	""	"357.6"	"443.9"	""	"792"	"37"	"35.000"	"28.000"	"0.00838871009558406"	""	"0.0003538"	"0.006531"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDGPSGK"	"[K].tVDGPSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.4722"	"0.0000"	"1"	"1"	"1"	"609.85760"	"1218.70793"	"1218.70942"	"-1.22"	"-0.00074"	"6/66"	"6"	"66"	"10666881.5027466"	"HCD"	"MS2"	"2.595264"	"644.3"	"100.000"	"31.3437"	"7759"	"7759"	"7740"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1194.4"	""	"882.8"	""	"870.4"	""	"935.8"	""	"991.8"	"1222.0"	""	"791"	"36"	"35.000"	"28.000"	"0.00944379362392162"	""	"0.0003538"	"0.007127"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDGPSGK"	"[K].tVDGPSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.4750"	"0.0000"	"1"	"1"	"1"	"609.85779"	"1218.70830"	"1218.70942"	"-0.92"	"-0.00056"	"6/66"	"6"	"66"	"60202658.8588867"	"HCD"	"MS2"	"0.0978796"	"535.8"	"14.137"	"31.6428"	"7882"	"7882"	"7868"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"874.7"	""	"666.1"	""	"774.4"	""	"736.4"	""	"884.5"	"1140.9"	""	"791"	"40"	"35.000"	"28.000"	"0.00407517710634659"	""	"0.001374"	"0.01595"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDGPSGK"	"[K].tVDGPSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"406.90765"	"1218.70841"	"1218.70942"	"-0.83"	"-0.00034"	"9/66"	"9"	"66"	"5626787.11791992"	"HCD"	"MS2"	"13.89384"	"338.8"	"100.000"	"31.4795"	"7815"	"7815"	"7788"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"580.6"	""	"446.8"	""	"464.3"	""	"500.4"	""	"548.9"	"665.9"	""	"791"	"32"	"35.000"	"28.000"	"0.0272989842418816"	"24"	"0.001374"	"0.01603"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDGPSGK"	"[K].tVDGPSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.4474"	"0.0000"	"1"	"1"	"1"	"609.85785"	"1218.70842"	"1218.70942"	"-0.82"	"-0.00050"	"6/66"	"6"	"66"	"7046144.49285889"	"HCD"	"MS2"	"0.9915456"	"465.0"	"100.000"	"31.8294"	"7948"	"7948"	"7929"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"767.7"	""	"600.7"	""	"659.1"	""	"632.9"	""	"779.2"	"964.5"	""	"790"	"38"	"35.000"	"28.000"	"0.00695980538332593"	""	"0.0006732"	"0.008818"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDGPSGK"	"[K].tVDGPSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"406.90771"	"1218.70859"	"1218.70942"	"-0.68"	"-0.00028"	"8/66"	"8"	"66"	"5116715.70489502"	"HCD"	"MS2"	"17.80259"	"321.2"	"100.000"	"31.5076"	"7817"	"7817"	"7789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"533.8"	""	"434.3"	""	"447.5"	""	"484.1"	""	"527.0"	"616.5"	""	"786"	"28"	"35.000"	"28.000"	"0.0686108106097758"	"22"	"0.002379"	"0.02445"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDGPSGK"	"[K].tVDGPSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"609.85846"	"1218.70964"	"1218.70942"	"0.18"	"0.00011"	"6/66"	"6"	"66"	"110127045.405762"	"HCD"	"MS2"	"0.0655672"	"975.8"	"14.198"	"31.5193"	"7822"	"7822"	"7805"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1726.0"	""	"1319.4"	""	"1364.4"	""	"1406.6"	""	"1527.3"	"1890.2"	""	"784"	"38"	"35.000"	"28.000"	"0.00605739740299058"	""	"0.001374"	"0.01661"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAQSQK"	"[K].aQAQSQk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11250"	"60S ribosomal protein L34 OS=Rattus norvegicus OX=10116 GN=Rpl34 PE=1 SV=3"	"P11250"	"60S ribosomal protein L34 OS=Rattus norvegicus OX=10116 GN=Rpl34 PE=1 SV=3"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"609.86249"	"1218.71770"	"1218.72066"	"-2.43"	"-0.00148"	"6/58"	"6"	"58"	"1495920.25634766"	"HCD"	"MS2"	"41.4853"	"128.5"	"100.000"	"21.0163"	"3582"	"3582"	"3555"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"221.9"	""	"153.5"	""	"161.6"	""	"208.3"	""	"242.4"	"231.7"	""	"651"	"22"	"35.000"	"28.000"	"0.211617214206676"	"24"	"0.005874"	"0.06605"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAQSQK"	"[K].aQAQSQk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11250"	"60S ribosomal protein L34 OS=Rattus norvegicus OX=10116 GN=Rpl34 PE=1 SV=3"	"P11250"	"60S ribosomal protein L34 OS=Rattus norvegicus OX=10116 GN=Rpl34 PE=1 SV=3"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"609.86267"	"1218.71807"	"1218.72066"	"-2.13"	"-0.00130"	"6/58"	"6"	"58"	"1336032.71350098"	"HCD"	"MS2"	"44.88408"	"113.2"	"100.000"	"21.0969"	"3597"	"3597"	"3573"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"198.6"	""	"130.5"	""	"138.1"	""	"177.0"	""	"206.9"	"221.6"	""	"651"	"24"	"35.000"	"28.000"	"0.130182016047237"	"25"	"0.004867"	"0.05179"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAETAK"	"[R].vAAAETAk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"609.87561"	"1218.74394"	"1218.74581"	"-1.53"	"-0.00093"	"7/58"	"7"	"58"	"1175062.31176758"	"HCD"	"MS2"	"0"	"91.5"	"100.000"	"36.0196"	"9649"	"9649"	"9627"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"116.8"	""	"100.3"	""	"126.2"	""	"142.3"	""	"189.2"	"195.3"	""	"580"	"45"	"34.000"	"27.000"	"0.000863769764534465"	"24"	"0"	"0.002579"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAETAK"	"[R].vAAAETAk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"609.87573"	"1218.74419"	"1218.74581"	"-1.33"	"-0.00081"	"7/58"	"7"	"58"	"3660796.52819824"	"HCD"	"MS2"	"16.83433"	"267.6"	"100.000"	"35.6694"	"9511"	"9511"	"9496"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"369.4"	""	"314.9"	""	"340.8"	""	"447.4"	"0.9"	"528.2"	"537.3"	""	"578"	"49"	"34.000"	"27.000"	"0.000376615198972714"	""	"0"	"0.002157"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAQAIK"	"[R].eTAQAIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"0.1750"	"0.0000"	"1"	"1"	"1"	"609.87573"	"1218.74419"	"1218.74581"	"-1.33"	"-0.00081"	"12/56"	"12"	"56"	"4982379.25579834"	"HCD"	"MS2"	"31.90388"	"351.1"	"100.000"	"35.3362"	"9377"	"9377"	"9350"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"559.8"	""	"468.5"	""	"493.4"	""	"632.4"	""	"634.5"	"533.9"	""	"578"	"40"	"34.000"	"27.000"	"0.0029234646228111"	""	"0.001546"	"0.0188"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAETLAK"	"[K].qAETLAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.6098"	"0.0000"	"1"	"1"	"1"	"609.87573"	"1218.74419"	"1218.74581"	"-1.33"	"-0.00081"	"12/62"	"12"	"62"	"5403444.07348633"	"HCD"	"MS2"	"8.091856"	"440.9"	"100.000"	"37.2059"	"10137"	"10137"	"10120"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"635.3"	""	"532.8"	""	"593.5"	""	"757.2"	""	"823.6"	"844.3"	""	"578"	"41"	"34.000"	"27.000"	"0.00217219016371261"	""	"0.003189"	"0.03222"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAETLAK"	"[K].qAETLAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.4231"	"0.0000"	"1"	"1"	"1"	"406.91977"	"1218.74475"	"1218.74581"	"-0.86"	"-0.00035"	"5/62"	"5"	"62"	"3594726.68725586"	"HCD"	"MS2"	"10.54639"	"198.4"	"100.000"	"37.0451"	"10071"	"10071"	"10043"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"254.2"	""	"252.6"	""	"269.7"	""	"329.9"	"1.6"	"362.8"	"410.6"	""	"578"	"26"	"34.000"	"27.000"	"0.0722599809530268"	""	"0.005369"	"0.06121"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ETAQAIK"	"[R].eTAQAIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"609.87604"	"1218.74480"	"1218.74581"	"-0.83"	"-0.00050"	"6/56"	"6"	"56"	"3335117.98565674"	"HCD"	"MS2"	"0"	"242.0"	"100.000"	"35.7148"	"9525"	"9525"	"9514"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"354.1"	""	"301.1"	""	"322.9"	""	"398.7"	"4.5"	"463.3"	"448.7"	""	"575"	"35"	"34.000"	"27.000"	"0.0095200197426245"	""	"0.003967"	"0.04212"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"VAAAETAK"	"[R].vAAAETAk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"609.87604"	"1218.74480"	"1218.74581"	"-0.83"	"-0.00050"	"7/58"	"7"	"58"	"3335117.98565674"	"HCD"	"MS2"	"0"	"242.0"	"100.000"	"35.7148"	"9525"	"9525"	"9514"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"354.1"	""	"301.1"	""	"322.9"	""	"398.7"	"4.5"	"463.3"	"448.7"	""	"575"	"35"	"34.000"	"27.000"	"0.00974176948900207"	""	"0.0004639"	"0.008"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAETLAK"	"[K].qAETLAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.4138"	"0.0000"	"1"	"1"	"1"	"406.91989"	"1218.74512"	"1218.74581"	"-0.56"	"-0.00023"	"5/62"	"5"	"62"	"3674747.24621582"	"HCD"	"MS2"	"18.57035"	"204.4"	"100.000"	"37.2162"	"10135"	"10135"	"10109"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"263.8"	""	"248.6"	""	"270.7"	""	"359.7"	"0.2"	"386.7"	"408.8"	""	"540"	"29"	"34.000"	"27.000"	"0.0343055008406306"	""	"0.003922"	"0.03989"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAETLAK"	"[K].qAETLAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.4878"	"0.0000"	"1"	"1"	"1"	"609.87622"	"1218.74516"	"1218.74581"	"-0.53"	"-0.00032"	"12/62"	"12"	"62"	"6011808.07940674"	"HCD"	"MS2"	"3.21412"	"486.0"	"100.000"	"37.3814"	"10202"	"10202"	"10184"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"651.6"	""	"574.0"	""	"640.8"	""	"831.7"	""	"940.5"	"981.8"	""	"540"	"41"	"34.000"	"27.000"	"0.00195597709220247"	""	"0.002379"	"0.02466"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAQAIK"	"[R].eTAQAIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"609.87628"	"1218.74529"	"1218.74581"	"-0.43"	"-0.00026"	"12/56"	"12"	"56"	"3386802.52996826"	"HCD"	"MS2"	"53.87674"	"261.4"	"100.000"	"35.4228"	"9407"	"9407"	"9378"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"405.7"	""	"356.2"	""	"377.3"	""	"456.7"	""	"474.9"	"403.7"	""	"540"	"40"	"34.000"	"27.000"	"0.00278845579555577"	""	"0.001134"	"0.01379"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAETLAK"	"[K].qAETLAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.5476"	"0.0000"	"1"	"1"	"1"	"609.87659"	"1218.74590"	"1218.74581"	"0.07"	"0.00004"	"12/62"	"12"	"62"	"15725632.3146362"	"HCD"	"MS2"	"5.647768"	"1050.3"	"100.000"	"36.9142"	"10017"	"10017"	"9999"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1496.9"	""	"1385.5"	""	"1357.2"	""	"1825.0"	""	"1870.2"	"2031.1"	""	"539"	"42"	"34.000"	"27.000"	"0.00164270193806226"	""	"0.002379"	"0.02449"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAETLAK"	"[K].qAETLAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"609.87683"	"1218.74639"	"1218.74581"	"0.47"	"0.00029"	"12/62"	"12"	"62"	"12948626.3339233"	"HCD"	"MS2"	"5.238104"	"849.5"	"100.000"	"37.0923"	"10084"	"10084"	"10064"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1206.0"	""	"1084.2"	""	"1085.9"	""	"1481.6"	""	"1595.3"	"1611.1"	""	"539"	"42"	"34.000"	"27.000"	"0.00163515440824102"	""	"0.0023"	"0.023"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDFVAGGY"	"[R].dFDFVAGGY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.29456"	"1219.58183"	"1219.58327"	"-1.18"	"-0.00072"	"7/70"	"7"	"70"	"492309.463623047"	"HCD"	"MS2"	"38.85139"	"7.1"	"100.000"	"108.7587"	"37862"	"37862"	"37855"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.5"	""	"7.8"	""	"12.5"	""	"8.5"	""	"16.4"	"11.4"	""	"296"	"41"	"31.000"	"24.000"	"0.0011729019691111"	"15"	"0"	"0.0008026"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDFVAGGY"	"[R].dFDFVAGGY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.29498"	"1219.58269"	"1219.58327"	"-0.48"	"-0.00029"	"7/70"	"7"	"70"	"475404.383300781"	"HCD"	"MS2"	"44.10825"	"7.8"	"100.000"	"108.7051"	"37931"	"37931"	"37924"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.3"	""	"7.6"	""	"14.4"	""	"10.5"	""	"11.9"	"14.9"	""	"307"	"37"	"31.000"	"24.000"	"0.00328933707271929"	"15"	"0"	"0.001494"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAWEVDSGR"	"[R].aAWEVDSGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"610.31500"	"1219.62273"	"1219.62687"	"-3.39"	"-0.00207"	"7/70"	"7"	"70"	"3736098.34802246"	"HCD"	"MS2"	"0"	"167.4"	"100.000"	"46.5748"	"13931"	"13931"	"13914"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"276.7"	""	"186.2"	""	"212.2"	""	"263.4"	"3.5"	"313.4"	"331.0"	""	"592"	"43"	"34.000"	"27.000"	"0.00133134837048413"	"20"	"0"	"0.0005575"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAWEVDSGR"	"[R].aAWEVDSGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"610.31537"	"1219.62346"	"1219.62687"	"-2.79"	"-0.00170"	"7/70"	"7"	"70"	"1542973.28131104"	"HCD"	"MS2"	"0"	"82.5"	"100.000"	"46.8564"	"14044"	"14044"	"14028"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"120.6"	""	"101.1"	""	"103.9"	""	"136.4"	"1.8"	"158.4"	"159.9"	""	"575"	"41"	"34.000"	"27.000"	"0.00222657766868224"	"22"	"0"	"0.0007941"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAWEVDSGR"	"[R].aAWEVDSGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"610.31537"	"1219.62346"	"1219.62687"	"-2.79"	"-0.00170"	"7/70"	"7"	"70"	"4225096.99450684"	"HCD"	"MS2"	"0"	"194.8"	"100.000"	"46.4231"	"13881"	"13881"	"13862"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"297.5"	""	"242.2"	""	"226.7"	""	"331.3"	"7.0"	"370.5"	"371.9"	""	"575"	"42"	"34.000"	"27.000"	"0.00181818407270663"	"21"	"0"	"0.0006009"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAWEVDSGR"	"[R].aAWEVDSGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"610.31549"	"1219.62370"	"1219.62687"	"-2.59"	"-0.00158"	"7/70"	"7"	"70"	"1217318.92230225"	"HCD"	"MS2"	"0"	"69.6"	"100.000"	"46.7280"	"14003"	"14003"	"13983"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"99.8"	""	"80.7"	""	"86.5"	""	"114.6"	""	"149.4"	"134.8"	""	"652"	"36"	"35.000"	"28.000"	"0.00871400089224239"	"21"	"0"	"0.001077"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MELHILEHR"	"[-].mELHILEHR.[V]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q5BJZ0"	"Cytosolic arginine sensor for mTORC1 subunit 1 OS=Rattus norvegicus OX=10116 GN=Castor1 PE=2 SV=1"	"Q5BJZ0"	"Cytosolic arginine sensor for mTORC1 subunit 1 OS=Rattus norvegicus OX=10116 GN=Castor1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"407.21289"	"1219.62412"	"1219.62520"	"-0.89"	"-0.00036"	"6/74"	"6"	"74"	"413554.464233398"	"HCD"	"MS2"	"15.07606"	"8.6"	"100.000"	"62.9911"	"20578"	"20578"	"20553"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.5"	""	"12.4"	""	"11.9"	""	"12.7"	""	"20.5"	"12.8"	"NoQuanLabels"	"649"	"26"	"35.000"	"28.000"	"0.0836016215447336"	"14"	"0.00557"	"0.06297"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLDMAGAR"	"[R].eQLDMAGAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"610.31860"	"1219.62993"	"1219.63024"	"-0.25"	"-0.00015"	"6/84"	"6"	"84"	"1428498.9119873"	"HCD"	"MS2"	"29.75603"	"95.1"	"100.000"	"40.8602"	"11611"	"11611"	"11586"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"150.6"	""	"129.9"	""	"142.6"	""	"125.9"	""	"164.4"	"188.7"	""	"666"	"31"	"35.000"	"28.000"	"0.025318865022108"	"27"	"0"	"0.0008567"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLDMAGAR"	"[R].eQLDMAGAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"610.31873"	"1219.63017"	"1219.63024"	"-0.05"	"-0.00003"	"6/84"	"6"	"84"	"1218652.76037598"	"HCD"	"MS2"	"28.73259"	"81.3"	"100.000"	"40.7333"	"11569"	"11569"	"11546"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"127.1"	""	"109.3"	""	"121.9"	""	"106.7"	""	"144.9"	"160.4"	""	"666"	"31"	"35.000"	"28.000"	"0.0283428966721391"	"26"	"0"	"0.0006071"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITSADTVR"	"[K].qITSADTVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"610.34625"	"1219.68523"	"1219.68438"	"0.69"	"0.00042"	"7/88"	"7"	"88"	"5523273.35723877"	"HCD"	"MS2"	"2.499695"	"261.6"	"100.000"	"32.7545"	"8326"	"8326"	"8305"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"414.1"	""	"301.2"	""	"347.9"	""	"425.0"	""	"489.4"	"502.0"	""	"877"	"50"	"36.000"	"29.000"	"0.000462348654067567"	"27"	"0"	"0.0006101"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITSADTVR"	"[K].qITSADTVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"610.34625"	"1219.68523"	"1219.68438"	"0.69"	"0.00042"	"7/88"	"7"	"88"	"5694652.83215332"	"HCD"	"MS2"	"2.989756"	"282.5"	"100.000"	"32.7220"	"8319"	"8319"	"8302"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"406.0"	""	"338.2"	""	"382.6"	""	"476.5"	"2.2"	"537.7"	"534.9"	""	"877"	"47"	"36.000"	"29.000"	"0.000816525209426668"	"27"	"0"	"0.001324"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INYGGEIPK"	"[K].INYGGEIPk.[S]"	"K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"610.34741"	"1219.68755"	"1219.68840"	"-0.70"	"-0.00043"	"6/78"	"6"	"78"	"2375222.18499756"	"HCD"	"MS2"	"32.23306"	"86.7"	"100.000"	"51.4672"	"15924"	"15924"	"15899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"116.7"	""	"122.8"	""	"121.7"	""	"145.0"	""	"158.9"	"161.9"	""	"887"	"45"	"36.000"	"29.000"	"0.00145175598178765"	"25"	"0.006769"	"0.07748"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INYGGEIPK"	"[K].INYGGEIPk.[S]"	"K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"610.34772"	"1219.68816"	"1219.68840"	"-0.20"	"-0.00012"	"6/78"	"6"	"78"	"2694966.05072021"	"HCD"	"MS2"	"14.79724"	"87.0"	"100.000"	"51.1808"	"15818"	"15818"	"15799"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"121.5"	""	"121.4"	""	"131.6"	""	"127.1"	"1.2"	"164.4"	"156.5"	""	"867"	"45"	"36.000"	"29.000"	"0.00133964306999464"	"25"	"0.001812"	"0.02071"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QATENAK"	"[K].qATENAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"610.35541"	"1219.70354"	"1219.70467"	"-0.93"	"-0.00057"	"6/62"	"6"	"62"	"2625869.84863281"	"HCD"	"MS2"	"0"	"216.1"	"100.000"	"22.2270"	"4073"	"4073"	"4051"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"301.7"	""	"189.5"	""	"206.7"	""	"411.9"	""	"482.6"	"464.7"	""	"739"	"38"	"35.000"	"28.000"	"0.00621748065565537"	"26"	"0.003449"	"0.03462"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QATENAK"	"[K].qATENAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"610.35577"	"1219.70427"	"1219.70467"	"-0.33"	"-0.00020"	"12/62"	"12"	"62"	"2018309.90588379"	"HCD"	"MS2"	"3.611792"	"166.7"	"100.000"	"22.2914"	"4082"	"4082"	"4056"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"230.2"	""	"164.1"	""	"163.2"	""	"304.5"	""	"387.0"	"338.6"	""	"722"	"39"	"35.000"	"28.000"	"0.00474796164421398"	"24"	"0.0023"	"0.02378"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDGTVK"	"[K].iEDGTVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457; P51652"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1; Aldo-keto reductase family 1 member C18 OS=Rattus norvegicus OX=10116 GN=Akr1c18 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"610.36804"	"1219.72881"	"1219.72982"	"-0.83"	"-0.00051"	"6/54"	"6"	"54"	"6472328.16931152"	"HCD"	"MS2"	"26.12686"	"415.9"	"100.000"	"44.3536"	"13038"	"13038"	"13016"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"561.3"	""	"508.1"	""	"529.4"	""	"691.1"	""	"783.4"	"875.3"	""	"654"	"25"	"35.000"	"28.000"	"0.0978470536170878"	"20"	"0.005369"	"0.06066"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDGTVK"	"[K].iEDGTVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457; P51652"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1; Aldo-keto reductase family 1 member C18 OS=Rattus norvegicus OX=10116 GN=Akr1c18 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"610.36847"	"1219.72966"	"1219.72982"	"-0.13"	"-0.00008"	"6/54"	"6"	"54"	"6293051.31799316"	"HCD"	"MS2"	"25.83154"	"421.7"	"100.000"	"44.4859"	"13080"	"13080"	"13061"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"550.2"	""	"508.3"	""	"562.6"	""	"661.6"	"1.3"	"842.8"	"875.0"	""	"617"	"24"	"34.000"	"27.000"	"0.111494942624321"	"20"	"0.005309"	"0.06024"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQSEAEK"	"[R].aQSEAEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3056"	"0.0000"	"1"	"1"	"1"	"610.84723"	"1220.68718"	"1220.68869"	"-1.23"	"-0.00075"	"6/64"	"6"	"64"	"19217120.7717896"	"HCD"	"MS2"	"0"	"1278.6"	"100.000"	"23.0138"	"4394"	"4394"	"4373"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1923.9"	""	"1258.7"	""	"1266.3"	""	"2254.3"	""	"2729.9"	"2712.9"	""	"743"	"36"	"35.000"	"28.000"	"0.0100915718837372"	""	"0.005067"	"0.05756"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQSEAEK"	"[R].aQSEAEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3611"	"0.0000"	"1"	"1"	"1"	"610.84735"	"1220.68743"	"1220.68869"	"-1.03"	"-0.00063"	"12/64"	"12"	"64"	"1912887.65039063"	"HCD"	"MS2"	"4.856788"	"149.1"	"100.000"	"23.3283"	"4523"	"4523"	"4499"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"218.0"	"2.7"	"153.9"	""	"163.5"	""	"252.3"	""	"299.7"	"329.2"	""	"743"	"36"	"35.000"	"28.000"	"0.00939634205679743"	""	"0.003449"	"0.03341"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQSEAEK"	"[R].aQSEAEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"610.84747"	"1220.68767"	"1220.68869"	"-0.83"	"-0.00051"	"12/64"	"12"	"64"	"1914527.31695557"	"HCD"	"MS2"	"0"	"157.6"	"100.000"	"23.3651"	"4521"	"4521"	"4495"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"216.8"	""	"170.2"	""	"173.6"	""	"262.1"	""	"349.8"	"326.2"	""	"743"	"36"	"35.000"	"28.000"	"0.00860912112463289"	""	"0.002973"	"0.02857"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQSEAEK"	"[R].aQSEAEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.2941"	"0.0000"	"1"	"1"	"1"	"610.84766"	"1220.68804"	"1220.68869"	"-0.53"	"-0.00033"	"6/64"	"6"	"64"	"15971468.2508545"	"HCD"	"MS2"	"0"	"1039.0"	"100.000"	"23.0554"	"4394"	"4394"	"4367"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1570.8"	""	"1025.1"	""	"1020.7"	""	"1847.9"	""	"2248.1"	"2158.3"	""	"728"	"34"	"35.000"	"28.000"	"0.0141286733220596"	""	"0.004942"	"0.05598"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNSVVK"	"[R].eSNSVVk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"610.86530"	"1220.72331"	"1220.72507"	"-1.44"	"-0.00088"	"9/62"	"9"	"62"	"2450117.20495605"	"HCD"	"MS2"	"26.51727"	"198.1"	"100.000"	"30.6685"	"7489"	"7489"	"7466"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"297.0"	""	"230.2"	""	"247.9"	""	"340.7"	""	"380.5"	"385.9"	""	"553"	"23"	"34.000"	"27.000"	"0.135112377358293"	"24"	"0.004942"	"0.05435"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTASVAEK"	"[R].gTASVAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q499V8"	"Specifically androgen-regulated gene protein OS=Rattus norvegicus OX=10116 GN=Sarg PE=1 SV=2"	"Q499V8"	"Specifically androgen-regulated gene protein OS=Rattus norvegicus OX=10116 GN=Sarg PE=1 SV=2"	"0"	"2"	"2"	"0.0952"	"0.0000"	"1"	"1"	"1"	"610.86584"	"1220.72441"	"1220.72507"	"-0.54"	"-0.00033"	"7/66"	"7"	"66"	"2539149.30047607"	"HCD"	"MS2"	"9.705013"	"191.4"	"100.000"	"30.9438"	"7598"	"7598"	"7585"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"250.3"	""	"198.5"	""	"208.5"	""	"368.0"	""	"390.0"	"404.0"	""	"517"	"21"	"34.000"	"27.000"	"0.192513215254698"	""	"0.0023"	"0.02435"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNSVVK"	"[R].eSNSVVk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"610.86597"	"1220.72466"	"1220.72507"	"-0.34"	"-0.00021"	"6/62"	"6"	"62"	"1940965.10113525"	"HCD"	"MS2"	"24.66559"	"160.1"	"100.000"	"30.6734"	"7479"	"7479"	"7460"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"254.0"	""	"180.3"	""	"183.7"	""	"265.7"	"1.0"	"327.5"	"306.1"	""	"517"	"30"	"34.000"	"27.000"	"0.0246297808400114"	"24"	"0.003449"	"0.03338"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTASVAEK"	"[R].gTASVAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q499V8"	"Specifically androgen-regulated gene protein OS=Rattus norvegicus OX=10116 GN=Sarg PE=1 SV=2"	"Q499V8"	"Specifically androgen-regulated gene protein OS=Rattus norvegicus OX=10116 GN=Sarg PE=1 SV=2"	"0"	"2"	"2"	"0.0952"	"0.0000"	"1"	"1"	"1"	"610.86627"	"1220.72527"	"1220.72507"	"0.16"	"0.00010"	"7/66"	"7"	"66"	"2662719.34765625"	"HCD"	"MS2"	"11.51056"	"203.7"	"100.000"	"30.9672"	"7596"	"7596"	"7578"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"268.2"	""	"223.0"	""	"226.2"	""	"388.2"	"0.5"	"419.8"	"407.7"	""	"517"	"21"	"34.000"	"27.000"	"0.186835994231161"	""	"0.001465"	"0.01826"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLAEDELR"	"[R].mLAEDELR.[D]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"3"	"P61206"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2"	"P61206; P84079; P84082"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"611.32007"	"1221.63286"	"1221.63465"	"-1.47"	"-0.00090"	"7/60"	"7"	"60"	"1264531.54962158"	"HCD"	"MS2"	"40.30865"	"60.0"	"100.000"	"49.9433"	"15303"	"15303"	"15278"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"95.8"	""	"69.9"	""	"77.3"	""	"87.0"	"1.7"	"117.0"	"119.9"	""	"698"	"15"	"35.000"	"28.000"	"1.21569722947568"	"19"	"0.00447"	"0.04677"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLAEDELR"	"[R].mLAEDELR.[D]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"3"	"P61206"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2"	"P61206; P84079; P84082"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"611.32050"	"1221.63371"	"1221.63465"	"-0.77"	"-0.00047"	"12/60"	"12"	"60"	"1394208.45904541"	"HCD"	"MS2"	"0"	"62.7"	"100.000"	"45.9286"	"13667"	"13667"	"13645"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.4"	""	"66.7"	""	"63.1"	"3.4"	"151.5"	"0.3"	"137.1"	"117.5"	""	"710"	"21"	"35.000"	"28.000"	"0.29189614073121"	"17"	"0.002056"	"0.02249"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLAEDELR"	"[R].mLAEDELR.[D]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"3"	"P61206"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2"	"P61206; P84079; P84082"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"611.32056"	"1221.63384"	"1221.63465"	"-0.67"	"-0.00041"	"7/60"	"7"	"60"	"3131888.42736816"	"HCD"	"MS2"	"0"	"118.3"	"100.000"	"45.4406"	"13480"	"13480"	"13461"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"117.4"	""	"116.2"	""	"128.5"	""	"277.8"	"5.5"	"257.2"	"221.3"	""	"710"	"30"	"35.000"	"28.000"	"0.0350936348603213"	"23"	"0.001374"	"0.01737"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLAEDELR"	"[R].mLAEDELR.[D]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"3"	"P61206"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2"	"P61206; P84079; P84082"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"611.32074"	"1221.63420"	"1221.63465"	"-0.37"	"-0.00023"	"7/60"	"7"	"60"	"2876354.08013916"	"HCD"	"MS2"	"5.201635"	"113.2"	"100.000"	"45.5649"	"13519"	"13519"	"13505"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"115.7"	""	"110.5"	""	"126.6"	""	"264.2"	"1.8"	"248.5"	"208.3"	""	"719"	"21"	"35.000"	"28.000"	"0.304578255383544"	"22"	"0.001546"	"0.01934"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFADAVQR"	"[K].dAFADAVQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.1538"	"0.0000"	"1"	"1"	"1"	"611.32220"	"1221.63713"	"1221.64252"	"-4.41"	"-0.00269"	"8/74"	"8"	"74"	"2938441.18713379"	"HCD"	"MS2"	"41.28951"	"122.8"	"100.000"	"49.0836"	"14964"	"14964"	"14944"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"161.3"	""	"135.0"	""	"153.1"	""	"189.5"	""	"264.7"	"263.7"	""	"726"	"13"	"35.000"	"28.000"	"1.94046862461101"	"24"	"0.002711"	"0.02596"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFADAVQR"	"[K].dAFADAVQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"611.32330"	"1221.63933"	"1221.64252"	"-2.61"	"-0.00159"	"7/74"	"7"	"74"	"3287829.35113525"	"HCD"	"MS2"	"30.84693"	"132.3"	"100.000"	"48.7707"	"14837"	"14837"	"14815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"184.5"	""	"134.5"	""	"145.3"	""	"234.4"	""	"295.0"	"264.6"	""	"736"	"30"	"35.000"	"28.000"	"0.0380932317337998"	"25"	"0"	"0.001636"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFVQVDDGR"	"[K].gFVQVDDGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"611.32379"	"1221.64031"	"1221.64252"	"-1.81"	"-0.00111"	"7/76"	"7"	"76"	"4028001.2232666"	"HCD"	"MS2"	"39.26452"	"187.2"	"100.000"	"47.7701"	"14429"	"14429"	"14407"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"255.9"	""	"268.9"	""	"246.7"	""	"285.0"	"1.4"	"377.9"	"339.3"	""	"746"	"6"	"35.000"	"28.000"	"8.68378039109047"	"14"	"0.00413"	"0.04569"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFVQVDDGR"	"[K].gFVQVDDGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"611.32385"	"1221.64043"	"1221.64252"	"-1.71"	"-0.00104"	"7/76"	"7"	"76"	"3560359.87774658"	"HCD"	"MS2"	"28.67088"	"184.7"	"100.000"	"48.0410"	"14527"	"14527"	"14513"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"254.2"	""	"256.4"	""	"230.7"	""	"284.9"	""	"371.4"	"355.8"	""	"726"	"8"	"35.000"	"28.000"	"5.5068928338774"	"17"	"0.002937"	"0.02792"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFADAVQR"	"[K].dAFADAVQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"611.32404"	"1221.64079"	"1221.64252"	"-1.41"	"-0.00086"	"8/74"	"8"	"74"	"3905980.23095703"	"HCD"	"MS2"	"39.48427"	"162.3"	"100.000"	"49.1769"	"14990"	"14990"	"14966"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"216.0"	""	"155.4"	""	"166.4"	""	"296.4"	""	"356.0"	"356.0"	""	"710"	"23"	"35.000"	"28.000"	"0.166428750661569"	"24"	"0"	"0.001787"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLEEEFR"	"[R].aVLEEEFR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7D2"	"Protein rogdi homolog OS=Rattus norvegicus OX=10116 GN=Rogdi PE=1 SV=1"	"Q4V7D2"	"Protein rogdi homolog OS=Rattus norvegicus OX=10116 GN=Rogdi PE=1 SV=1"	"0"	"2"	"2"	"0.2083"	"0.0000"	"1"	"1"	"1"	"611.33594"	"1221.66460"	"1221.66767"	"-2.51"	"-0.00154"	"7/60"	"7"	"60"	"686814.777893066"	"HCD"	"MS2"	"46.33542"	"40.6"	"100.000"	"66.6485"	"22062"	"22062"	"22036"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.4"	""	"52.4"	""	"56.9"	""	"65.2"	""	"81.4"	"72.0"	""	"755"	"24"	"35.000"	"28.000"	"0.163650356591292"	""	"0.000936"	"0.01283"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLEEEFR"	"[K].iGLEEEFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"B2GV87"	"Receptor-type tyrosine-protein phosphatase epsilon OS=Rattus norvegicus OX=10116 GN=Ptpre PE=2 SV=1"	"B2GV87"	"Receptor-type tyrosine-protein phosphatase epsilon OS=Rattus norvegicus OX=10116 GN=Ptpre PE=2 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"611.33636"	"1221.66545"	"1221.66767"	"-1.81"	"-0.00111"	"4/60"	"4"	"60"	"635685.990722656"	"HCD"	"MS2"	"55.95359"	"32.5"	"100.000"	"74.7263"	"25352"	"25352"	"25331"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.6"	""	"37.4"	""	"37.2"	""	"63.4"	"0.2"	"59.4"	"68.4"	""	"760"	"8"	"35.000"	"28.000"	"5.81813235439171"	"19"	"0.006189"	"0.0702"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPSLDLER"	"[K].yPSLDLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"611.33716"	"1221.66704"	"1221.66767"	"-0.51"	"-0.00031"	"5/64"	"5"	"64"	"1353790.49755859"	"HCD"	"MS2"	"31.41503"	"56.5"	"100.000"	"69.8424"	"23378"	"23378"	"23358"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.2"	""	"77.2"	""	"90.2"	""	"87.7"	"1.3"	"111.6"	"98.6"	""	"765"	"38"	"35.000"	"28.000"	"0.00569680612224425"	"19"	"0"	"0.002629"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPSLDLER"	"[K].yPSLDLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"611.33740"	"1221.66753"	"1221.66767"	"-0.12"	"-0.00007"	"7/64"	"7"	"64"	"1348958.48516846"	"HCD"	"MS2"	"40.85609"	"57.3"	"100.000"	"69.9845"	"23422"	"23422"	"23401"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"74.1"	""	"77.6"	""	"94.2"	""	"90.1"	""	"108.7"	"101.7"	""	"765"	"30"	"35.000"	"28.000"	"0.0427200192276065"	"17"	"0.002973"	"0.02885"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLEEEFR"	"[R].aVLEEEFR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7D2"	"Protein rogdi homolog OS=Rattus norvegicus OX=10116 GN=Rogdi PE=1 SV=1"	"Q4V7D2"	"Protein rogdi homolog OS=Rattus norvegicus OX=10116 GN=Rogdi PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"611.33789"	"1221.66850"	"1221.66767"	"0.68"	"0.00042"	"5/60"	"5"	"60"	"731940.219726563"	"HCD"	"MS2"	"64.96266"	"44.3"	"100.000"	"66.5203"	"22025"	"22025"	"21997"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.0"	""	"61.7"	""	"59.8"	""	"65.0"	""	"82.3"	"95.6"	""	"770"	"21"	"35.000"	"28.000"	"0.305113012234981"	""	"0.000936"	"0.01305"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NASNTEK"	"[K].nASNTEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"611.34479"	"1221.68230"	"1221.68394"	"-1.34"	"-0.00082"	"6/66"	"6"	"66"	"1958159.95404053"	"HCD"	"MS2"	"0"	"163.6"	"100.000"	"21.1240"	"3626"	"3626"	"3601"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"222.8"	""	"173.1"	""	"196.7"	""	"325.5"	"0.3"	"337.2"	"296.6"	""	"757"	"35"	"35.000"	"28.000"	"0.012447034228656"	""	"0.003449"	"0.03542"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NASNTEK"	"[K].nASNTEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"611.34583"	"1221.68437"	"1221.68394"	"0.36"	"0.00022"	"5/66"	"5"	"66"	"1939072.29144287"	"HCD"	"MS2"	"0"	"168.5"	"100.000"	"21.2046"	"3641"	"3641"	"3613"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"247.8"	""	"181.0"	""	"204.7"	""	"319.3"	""	"349.3"	"295.6"	""	"738"	"22"	"35.000"	"28.000"	"0.241005173926917"	"22"	"0.005829"	"0.06509"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANTFVAELK"	"[R].ANTFVAELk.[G]"	"K9(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"611.35577"	"1221.70427"	"1221.70405"	"0.18"	"0.00011"	"7/86"	"7"	"86"	"984148.281555176"	"HCD"	"MS2"	"34.75702"	"42.8"	"100.000"	"64.3918"	"21148"	"21148"	"21131"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.5"	""	"42.7"	""	"53.3"	""	"76.1"	"2.0"	"86.4"	"100.0"	""	"668"	"26"	"35.000"	"28.000"	"0.0866455906947685"	"20"	"0.004431"	"0.04641"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMAAVVK"	"[K].emAAVVk.[K]"	"N-Term(TMT6plex); M2(Oxidation); K7(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"611.36713"	"1221.72698"	"1221.72772"	"-0.61"	"-0.00037"	"6/48"	"6"	"48"	"2296084.55511475"	"HCD"	"MS2"	"47.41909"	"134.3"	"100.000"	"36.3025"	"9769"	"9769"	"9747"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"192.8"	""	"179.2"	""	"166.0"	""	"231.6"	""	"239.9"	"266.4"	""	"547"	"12"	"34.000"	"27.000"	"1.84059115493761"	"19"	"0.008641"	"0.1067"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLFLDDR"	"[K].nTLFLDDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"611.83447"	"1222.66167"	"1222.66292"	"-1.02"	"-0.00062"	"6/80"	"6"	"80"	"925078.27545166"	"HCD"	"MS2"	"19.74209"	"49.4"	"100.000"	"65.2838"	"21505"	"21505"	"21486"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.7"	""	"55.9"	""	"70.0"	""	"93.8"	""	"89.2"	"103.7"	""	"751"	"35"	"35.000"	"28.000"	"0.0132010945418376"	"23"	"0"	"0.002449"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLFLDDR"	"[K].nTLFLDDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"611.83447"	"1222.66167"	"1222.66292"	"-1.02"	"-0.00062"	"6/80"	"6"	"80"	"1842963.00152588"	"HCD"	"MS2"	"4.687455"	"93.7"	"100.000"	"65.5883"	"21630"	"21630"	"21613"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"111.0"	""	"99.8"	""	"130.3"	""	"170.6"	""	"184.6"	"199.8"	""	"751"	"54"	"35.000"	"28.000"	"0.000136650096065766"	"25"	"0"	"0.0009188"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEGEATLR"	"[K].fAEGEATLR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"611.83478"	"1222.66228"	"1222.66292"	"-0.52"	"-0.00032"	"7/72"	"7"	"72"	"2266223.37591553"	"HCD"	"MS2"	"10.93445"	"111.5"	"100.000"	"52.3943"	"16302"	"16302"	"16284"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"154.9"	""	"156.7"	"2.6"	"158.0"	""	"166.4"	""	"207.9"	"212.9"	""	"733"	"45"	"35.000"	"28.000"	"0.00116969862389443"	"21"	"0"	"0.0007606"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEGEATLR"	"[K].fAEGEATLR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"611.83484"	"1222.66240"	"1222.66292"	"-0.42"	"-0.00026"	"7/72"	"7"	"72"	"3062089.30718994"	"HCD"	"MS2"	"10.24143"	"147.3"	"100.000"	"52.0554"	"16175"	"16175"	"16158"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"199.8"	""	"201.8"	""	"216.3"	""	"228.0"	""	"270.4"	"282.3"	""	"732"	"45"	"35.000"	"28.000"	"0.00113365546351327"	"21"	"0"	"0.0006898"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLFLDDR"	"[K].nTLFLDDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"611.83496"	"1222.66265"	"1222.66292"	"-0.22"	"-0.00014"	"6/80"	"6"	"80"	"1885299.79962158"	"HCD"	"MS2"	"1.199538"	"91.3"	"100.000"	"65.5014"	"21610"	"21610"	"21593"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"110.9"	""	"105.1"	""	"125.7"	""	"158.1"	""	"185.6"	"181.6"	""	"732"	"54"	"35.000"	"28.000"	"0.000130461114834005"	"25"	"0"	"0.001369"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEGEATLR"	"[K].fAEGEATLR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"611.83496"	"1222.66265"	"1222.66292"	"-0.22"	"-0.00014"	"7/72"	"7"	"72"	"2138165.07617188"	"HCD"	"MS2"	"32.31236"	"115.8"	"100.000"	"51.7680"	"16058"	"16058"	"16037"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"154.5"	""	"158.7"	""	"169.1"	""	"177.4"	""	"212.1"	"227.4"	""	"732"	"32"	"35.000"	"28.000"	"0.0225673770681302"	"17"	"0"	"0.001079"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLFLDDR"	"[K].nTLFLDDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"611.83527"	"1222.66326"	"1222.66292"	"0.28"	"0.00017"	"5/80"	"5"	"80"	"845486.49597168"	"HCD"	"MS2"	"30.45827"	"43.9"	"100.000"	"65.1830"	"21480"	"21480"	"21453"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.0"	""	"48.6"	""	"63.7"	""	"69.2"	""	"91.6"	"91.7"	""	"728"	"32"	"35.000"	"28.000"	"0.0242717663993758"	"21"	"0"	"0.00212"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEGEATLR"	"[K].fAEGEATLR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"611.83527"	"1222.66326"	"1222.66292"	"0.28"	"0.00017"	"7/72"	"7"	"72"	"2472738.94573975"	"HCD"	"MS2"	"22.86188"	"125.7"	"100.000"	"52.0976"	"16181"	"16181"	"16163"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"166.4"	""	"179.7"	""	"172.2"	""	"187.6"	""	"236.4"	"251.4"	""	"728"	"37"	"35.000"	"28.000"	"0.00765775352074996"	"20"	"0"	"0.002235"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDSISSK"	"[K].qDSISSk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"611.85516"	"1222.70305"	"1222.70434"	"-1.05"	"-0.00064"	"10/68"	"10"	"68"	"2687533.04260254"	"HCD"	"MS2"	"0"	"208.8"	"100.000"	"31.3097"	"7736"	"7736"	"7711"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"428.5"	""	"285.9"	""	"227.2"	""	"320.5"	""	"368.2"	"345.3"	""	"664"	"32"	"35.000"	"28.000"	"0.0208515375126022"	"26"	"0.004069"	"0.04482"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDSISSK"	"[K].qDSISSk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"611.85547"	"1222.70366"	"1222.70434"	"-0.55"	"-0.00034"	"10/68"	"10"	"68"	"3580142.28320313"	"HCD"	"MS2"	"0"	"268.9"	"100.000"	"31.3185"	"7749"	"7749"	"7726"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"548.0"	""	"370.1"	""	"295.2"	""	"426.4"	""	"476.4"	"429.7"	""	"640"	"34"	"35.000"	"28.000"	"0.0134942881097146"	"27"	"0.004867"	"0.0522"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEGEECR"	"[K].lLEGEEcR.[ILM]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"6"	"Q6P6Q2"	"Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1"	"P16884; Q6IG05; Q6P6Q2; Q6IG00; Q6IG02; Q6IG03"	"Neurofilament heavy polypeptide OS=Rattus norvegicus OX=10116 GN=Nefh PE=1 SV=4; Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1; Keratin, type II cytoskeletal 4 OS=Rattus norvegicus OX=10116 GN=Krt4 PE=3 SV=1; Keratin, type II cytoskeletal 2 epidermal OS=Rattus norvegicus OX=10116 GN=Krt2 PE=3 SV=1; Keratin, type II cytoskeletal 73 OS=Rattus norvegicus OX=10116 GN=Krt73 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"612.30054"	"1223.59380"	"1223.59616"	"-1.93"	"-0.00118"	"7/62"	"7"	"62"	"479675.950683594"	"HCD"	"MS2"	"52.40735"	"26.5"	"100.000"	"64.8947"	"21363"	"21363"	"21342"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.7"	""	"27.1"	""	"49.1"	""	"41.0"	""	"48.5"	"46.8"	""	"460"	"10"	"33.000"	"26.000"	"2.41951230979341"	"17"	"0.003717"	"0.03865"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEGEECR"	"[K].lLEGEEcR.[ILM]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"6"	"Q6P6Q2"	"Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1"	"P16884; Q6IG05; Q6P6Q2; Q6IG00; Q6IG02; Q6IG03"	"Neurofilament heavy polypeptide OS=Rattus norvegicus OX=10116 GN=Nefh PE=1 SV=4; Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1; Keratin, type II cytoskeletal 4 OS=Rattus norvegicus OX=10116 GN=Krt4 PE=3 SV=1; Keratin, type II cytoskeletal 2 epidermal OS=Rattus norvegicus OX=10116 GN=Krt2 PE=3 SV=1; Keratin, type II cytoskeletal 73 OS=Rattus norvegicus OX=10116 GN=Krt73 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"612.30280"	"1223.59831"	"1223.59616"	"1.76"	"0.00108"	"6/62"	"6"	"62"	"579288.674621582"	"HCD"	"MS2"	"51.22742"	"31.1"	"100.000"	"64.9285"	"21362"	"21362"	"21335"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.0"	""	"41.7"	""	"59.2"	""	"41.8"	"0.9"	"50.4"	"53.7"	""	"490"	"18"	"33.000"	"26.000"	"0.429700722951232"	"17"	"0.003507"	"0.03671"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASFNHFDR"	"[R].aSFnHFDR.[D]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"408.53793"	"1223.59925"	"1223.60065"	"-1.15"	"-0.00047"	"7/74"	"7"	"74"	"1081040.94158936"	"HCD"	"MS2"	"30.25985"	"54.5"	"100.000"	"40.5358"	"11480"	"11480"	"11457"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.4"	""	"66.3"	""	"61.5"	""	"87.0"	"0.0"	"108.6"	"139.9"	""	"494"	"14"	"33.000"	"26.000"	"0.987863531909911"	"14"	"0.008478"	"0.1041"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSMQTPMR"	"[R].sGSMQTPMR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"612.30676"	"1223.60625"	"1223.60739"	"-0.94"	"-0.00057"	"7/82"	"7"	"82"	"2042288.39697266"	"HCD"	"MS2"	"0"	"114.5"	"100.000"	"30.1890"	"7294"	"7294"	"7269"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"176.4"	""	"161.5"	""	"163.5"	""	"159.0"	""	"198.6"	"226.3"	""	"504"	"25"	"34.000"	"27.000"	"0.0741994251717288"	"22"	"0"	"0.001491"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSMQTPMR"	"[R].sGSMQTPMR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"612.30750"	"1223.60771"	"1223.60739"	"0.26"	"0.00016"	"4/82"	"4"	"82"	"712558.005432129"	"HCD"	"MS2"	"0"	"55.1"	"100.000"	"30.5197"	"7417"	"7417"	"7386"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"77.2"	""	"67.9"	""	"73.9"	""	"72.2"	"1.2"	"122.4"	"108.0"	""	"514"	"6"	"34.000"	"27.000"	"6.56044234783941"	"14"	"0.005829"	"0.06516"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSMQTPMR"	"[R].sGSMQTPMR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"612.30750"	"1223.60771"	"1223.60739"	"0.26"	"0.00016"	"7/82"	"7"	"82"	"1614201.34313965"	"HCD"	"MS2"	"0"	"93.9"	"100.000"	"30.1986"	"7286"	"7286"	"7263"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"138.0"	""	"133.8"	""	"125.0"	""	"131.0"	""	"175.2"	"193.7"	""	"514"	"27"	"34.000"	"27.000"	"0.0466587525332696"	"21"	"0"	"0.001638"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDYEER"	"[R].lGLDYEER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"612.32574"	"1223.64421"	"1223.64693"	"-2.22"	"-0.00136"	"11/62"	"11"	"62"	"1602877.28338623"	"HCD"	"MS2"	"0"	"76.5"	"100.000"	"60.1379"	"19440"	"19440"	"19425"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.3"	""	"105.4"	""	"102.3"	""	"132.1"	"1.8"	"147.8"	"144.9"	""	"592"	"18"	"34.000"	"27.000"	"0.503838918484905"	"21"	"0.008052"	"0.09906"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDYEER"	"[R].lGLDYEER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"612.32623"	"1223.64519"	"1223.64693"	"-1.43"	"-0.00087"	"7/62"	"7"	"62"	"3135330.5369873"	"HCD"	"MS2"	"0"	"146.3"	"100.000"	"60.6518"	"19631"	"19631"	"19623"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"178.3"	""	"194.7"	""	"208.8"	""	"229.7"	"1.6"	"270.1"	"304.0"	""	"624"	"37"	"34.000"	"27.000"	"0.00567746667886315"	"23"	"0.0004639"	"0.008049"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDYEER"	"[R].lGLDYEER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"612.32635"	"1223.64543"	"1223.64693"	"-1.23"	"-0.00075"	"8/62"	"8"	"62"	"3334172.40631104"	"HCD"	"MS2"	"0"	"152.6"	"100.000"	"60.4220"	"19553"	"19553"	"19535"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"189.2"	""	"199.3"	""	"212.1"	""	"241.8"	"0.8"	"283.7"	"320.5"	""	"624"	"34"	"34.000"	"27.000"	"0.0120824385215545"	"23"	"0.0006732"	"0.009033"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEEEFAR"	"[K].tLEEEFAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"0"	"2"	"2"	"0.3243"	"0.0000"	"1"	"1"	"1"	"612.32684"	"1223.64641"	"1223.64693"	"-0.43"	"-0.00026"	"6/64"	"6"	"64"	"2008178.30718994"	"HCD"	"MS2"	"0"	"106.6"	"100.000"	"58.2637"	"18705"	"18705"	"18687"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"123.2"	""	"134.7"	""	"144.4"	""	"199.4"	""	"216.1"	"193.7"	""	"616"	"37"	"34.000"	"27.000"	"0.00563054866571964"	""	"0.0001301"	"0.004553"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDYEER"	"[R].lGLDYEER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"612.32703"	"1223.64678"	"1223.64693"	"-0.13"	"-0.00008"	"7/62"	"7"	"62"	"1573866.70220947"	"HCD"	"MS2"	"0"	"81.1"	"100.000"	"60.3655"	"19518"	"19518"	"19508"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"105.3"	""	"105.6"	""	"107.4"	""	"141.1"	"1.7"	"147.9"	"159.4"	""	"616"	"16"	"34.000"	"27.000"	"0.808259311362407"	"20"	"0.004817"	"0.05111"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEEEFAR"	"[K].tLEEEFAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"612.32727"	"1223.64726"	"1223.64693"	"0.27"	"0.00017"	"6/64"	"6"	"64"	"1876444.04589844"	"HCD"	"MS2"	"2.718062"	"95.9"	"100.000"	"58.4590"	"18770"	"18770"	"18751"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"118.4"	""	"125.3"	""	"136.1"	""	"180.9"	"1.2"	"180.9"	"166.5"	""	"610"	"39"	"34.000"	"27.000"	"0.00350994118628053"	""	"0.0001301"	"0.00395"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDGMLSK"	"[K].dDGMLSk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"612.33813"	"1223.66899"	"1223.67059"	"-1.31"	"-0.00080"	"12/58"	"12"	"58"	"2357647.72808838"	"HCD"	"MS2"	"6.523215"	"178.0"	"100.000"	"50.7158"	"15629"	"15629"	"15604"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"284.2"	""	"218.9"	""	"186.2"	""	"213.6"	""	"420.6"	"369.8"	""	"686"	"25"	"35.000"	"28.000"	"0.118112026251825"	"18"	"0.005427"	"0.06243"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMSGDVK"	"[K].eMSGDVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"612.33826"	"1223.66924"	"1223.67059"	"-1.11"	"-0.00068"	"10/56"	"10"	"56"	"16265599.3411255"	"HCD"	"MS2"	"0"	"787.8"	"70.942"	"36.8313"	"9984"	"9984"	"9969"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1398.6"	""	"1064.6"	""	"1105.7"	""	"1035.1"	""	"1394.5"	"1465.5"	""	"686"	"25"	"35.000"	"28.000"	"0.0991503199651357"	""	"0.008668"	"0.1092"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMSGDVK"	"[K].eMSGDVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"612.33856"	"1223.66985"	"1223.67059"	"-0.61"	"-0.00037"	"10/56"	"10"	"56"	"15370798.6565552"	"HCD"	"MS2"	"0.2231613"	"898.5"	"82.351"	"37.0482"	"10066"	"10066"	"10050"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1521.5"	""	"1186.3"	""	"1294.4"	""	"1182.7"	""	"1627.1"	"1704.6"	""	"672"	"27"	"35.000"	"28.000"	"0.0628549199162908"	""	"0.007147"	"0.08212"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDGMLSK"	"[K].dDGMLSk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"612.33881"	"1223.67034"	"1223.67059"	"-0.21"	"-0.00013"	"6/58"	"6"	"58"	"952720.300415039"	"HCD"	"MS2"	"25.13255"	"70.2"	"100.000"	"51.3911"	"15893"	"15893"	"15869"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"95.7"	""	"84.7"	""	"79.4"	""	"94.7"	""	"157.3"	"156.2"	""	"736"	"14"	"35.000"	"28.000"	"1.62497924626019"	"16"	"0.009724"	"0.1275"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDGMLSK"	"[K].dDGMLSk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"612.33911"	"1223.67095"	"1223.67059"	"0.29"	"0.00018"	"6/58"	"6"	"58"	"2229839.6605835"	"HCD"	"MS2"	"18.36787"	"172.1"	"100.000"	"51.0572"	"15757"	"15757"	"15730"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"267.7"	""	"213.4"	""	"168.4"	""	"219.9"	""	"399.4"	"368.0"	""	"735"	"23"	"35.000"	"28.000"	"0.199644496823469"	"14"	"0.005427"	"0.06163"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEATITEFA"	"[K].lEATITEFA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"612.33929"	"1223.67131"	"1223.67209"	"-0.63"	"-0.00039"	"7/76"	"7"	"76"	"837614.225585938"	"HCD"	"MS2"	"9.530612"	"9.2"	"100.000"	"109.5624"	"38146"	"38146"	"38139"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.8"	""	"10.4"	""	"15.6"	""	"15.6"	""	"15.4"	"17.6"	""	"735"	"49"	"35.000"	"28.000"	"0.000451083917450715"	"18"	"0.0002479"	"0.005075"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEATITEFA"	"[K].lEATITEFA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"612.33942"	"1223.67156"	"1223.67209"	"-0.43"	"-0.00026"	"6/76"	"6"	"76"	"648807.757080078"	"HCD"	"MS2"	"19.75537"	"7.0"	"100.000"	"109.5029"	"38224"	"38224"	"38214"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.4"	""	"11.9"	""	"10.6"	""	"9.6"	""	"14.7"	"11.1"	""	"698"	"54"	"35.000"	"28.000"	"0.000125263755191107"	"23"	"0"	"0.002352"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSSEK"	"[R].dLSSSEk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"612.34711"	"1223.68694"	"1223.68835"	"-1.16"	"-0.00071"	"10/58"	"10"	"58"	"1457851.54602051"	"HCD"	"MS2"	"12.54254"	"125.2"	"100.000"	"33.9319"	"8800"	"8800"	"8777"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"165.0"	""	"129.1"	""	"129.2"	""	"230.5"	""	"285.8"	"252.0"	""	"622"	"29"	"34.000"	"27.000"	"0.0401569194093809"	""	"0.003449"	"0.03322"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TETTGEK"	"[R].tETTGEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"612.34735"	"1223.68743"	"1223.68835"	"-0.76"	"-0.00046"	"10/58"	"10"	"58"	"5124943.51281738"	"HCD"	"MS2"	"0"	"364.4"	"100.000"	"23.7853"	"4709"	"4709"	"4691"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"600.3"	""	"459.9"	""	"482.9"	""	"596.8"	""	"620.0"	"694.9"	""	"622"	"25"	"34.000"	"27.000"	"0.0924188135870526"	"22"	"0.006739"	"0.07611"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TETTGEK"	"[R].tETTGEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"612.34772"	"1223.68816"	"1223.68835"	"-0.16"	"-0.00010"	"10/58"	"10"	"58"	"5078714.01885986"	"HCD"	"MS2"	"0"	"374.7"	"100.000"	"23.8797"	"4730"	"4730"	"4711"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"610.3"	""	"466.6"	""	"528.8"	""	"568.3"	""	"659.0"	"723.7"	""	"604"	"27"	"34.000"	"27.000"	"0.0638273690030668"	"22"	"0.006769"	"0.07921"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSSEK"	"[R].dLSSSEk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"612.34802"	"1223.68877"	"1223.68835"	"0.34"	"0.00021"	"6/58"	"6"	"58"	"1485794.06933594"	"HCD"	"MS2"	"27.44339"	"124.2"	"100.000"	"33.8821"	"8790"	"8790"	"8763"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"175.1"	""	"111.4"	""	"134.3"	""	"231.6"	""	"274.6"	"254.7"	""	"613"	"36"	"34.000"	"27.000"	"0.00771667978358089"	""	"0.001886"	"0.02102"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFEEDSR"	"[K].vNFEEDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"612.80585"	"1224.60442"	"1224.60580"	"-1.13"	"-0.00069"	"6/74"	"6"	"74"	"1463799.7598877"	"HCD"	"MS2"	"21.78415"	"94.3"	"100.000"	"42.7258"	"12380"	"12380"	"12360"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"158.7"	""	"107.7"	""	"117.7"	""	"151.4"	""	"173.7"	"184.3"	""	"481"	"19"	"33.000"	"26.000"	"0.335826590833953"	"20"	"0.002973"	"0.03029"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFEEDSR"	"[K].vNFEEDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"612.80615"	"1224.60503"	"1224.60580"	"-0.63"	"-0.00038"	"6/74"	"6"	"74"	"1539616.6751709"	"HCD"	"MS2"	"11.37173"	"104.7"	"100.000"	"42.5510"	"12298"	"12298"	"12277"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"169.1"	""	"129.7"	""	"132.8"	""	"165.0"	""	"203.3"	"199.8"	""	"483"	"32"	"33.000"	"26.000"	"0.016140505609282"	""	"0.0004639"	"0.007619"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFEEDSR"	"[K].vNFEEDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"612.80646"	"1224.60564"	"1224.60580"	"-0.13"	"-0.00008"	"5/74"	"5"	"74"	"1553908.48718262"	"HCD"	"MS2"	"28.34149"	"101.0"	"100.000"	"42.8569"	"12423"	"12423"	"12402"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"166.9"	""	"113.7"	""	"139.0"	""	"155.0"	"2.3"	"189.4"	"190.1"	""	"481"	"15"	"33.000"	"26.000"	"0.814920195514782"	"21"	"0.002795"	"0.02649"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFEEDSR"	"[K].vNFEEDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.4194"	"0.0000"	"1"	"1"	"1"	"612.80664"	"1224.60600"	"1224.60580"	"0.17"	"0.00010"	"6/74"	"6"	"74"	"1574102.90808105"	"HCD"	"MS2"	"27.77831"	"103.0"	"100.000"	"42.4242"	"12257"	"12257"	"12236"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"170.8"	""	"125.1"	""	"130.0"	""	"159.5"	"1.0"	"198.9"	"190.3"	""	"480"	"31"	"33.000"	"26.000"	"0.0182898962406099"	""	"0.0003538"	"0.007076"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITQSEFDR"	"[R].iTQSEFDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"612.82385"	"1224.64043"	"1224.64218"	"-1.43"	"-0.00088"	"6/76"	"6"	"76"	"5313514.37921143"	"HCD"	"MS2"	"0"	"267.3"	"100.000"	"46.4603"	"13885"	"13885"	"13868"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"383.0"	""	"326.0"	""	"360.2"	""	"439.9"	"1.3"	"538.6"	"485.1"	""	"558"	"33"	"34.000"	"27.000"	"0.0128411584029198"	"19"	"0.0006732"	"0.008305"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITQSEFDR"	"[R].iTQSEFDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"612.82458"	"1224.64189"	"1224.64218"	"-0.24"	"-0.00014"	"6/76"	"6"	"76"	"4669555.54205322"	"HCD"	"MS2"	"12.1783"	"245.1"	"100.000"	"46.2375"	"13805"	"13805"	"13785"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"339.3"	""	"298.2"	""	"337.8"	""	"405.5"	""	"479.3"	"466.0"	""	"544"	"32"	"34.000"	"27.000"	"0.0186452797595124"	"18"	"0.0003538"	"0.006863"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APSIHGGSGGR"	"[R].aPSIHGGSGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"612.83557"	"1224.66387"	"1224.66465"	"-0.64"	"-0.00039"	"9/90"	"9"	"90"	"343045.931030273"	"HCD"	"MS2"	"0"	"20.4"	"100.000"	"20.9773"	"3566"	"3566"	"3545"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.2"	""	"24.5"	""	"22.6"	""	"50.5"	""	"40.5"	"35.4"	""	"653"	"12"	"35.000"	"28.000"	"1.9137411071383"	"13"	"0.009594"	"0.1263"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APSIHGGSGGR"	"[R].aPSIHGGSGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"612.83575"	"1224.66423"	"1224.66465"	"-0.34"	"-0.00021"	"7/90"	"7"	"90"	"489012.538513184"	"HCD"	"MS2"	"0"	"24.7"	"100.000"	"20.9734"	"3547"	"3547"	"3529"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.3"	""	"26.8"	""	"24.9"	""	"66.6"	"0.7"	"51.5"	"38.7"	""	"653"	"22"	"35.000"	"28.000"	"0.194483689862222"	"23"	"0.002711"	"0.0261"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAGPASVPLR"	"[K].qAGPASVPLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9556"	"0.0000"	"1"	"1"	"1"	"612.86578"	"1224.72429"	"1224.72619"	"-1.55"	"-0.00095"	"8/90"	"8"	"90"	"3508694.88824463"	"HCD"	"MS2"	"24.32955"	"145.8"	"100.000"	"41.4612"	"11854"	"11854"	"11832"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"190.0"	""	"177.0"	""	"177.3"	""	"262.0"	"3.2"	"284.2"	"289.7"	""	"362"	"45"	"32.000"	"25.000"	"0.000532940315717576"	"18"	"0"	"6.119E-05"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAGPASVPLR"	"[K].qAGPASVPLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"612.86621"	"1224.72515"	"1224.72619"	"-0.85"	"-0.00052"	"6/90"	"6"	"90"	"3194936.215271"	"HCD"	"MS2"	"12.02789"	"143.0"	"100.000"	"41.2745"	"11787"	"11787"	"11769"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"185.1"	""	"177.3"	""	"178.5"	""	"255.8"	"3.8"	"279.5"	"277.0"	""	"360"	"33"	"32.000"	"25.000"	"0.00883634177074684"	"18"	"0"	"8.607E-05"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAGPASVPLR"	"[K].qAGPASVPLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"612.86633"	"1224.72539"	"1224.72619"	"-0.65"	"-0.00040"	"9/90"	"9"	"90"	"10437961.7091675"	"HCD"	"MS2"	"0.6225801"	"352.1"	"100.000"	"41.5641"	"11906"	"11906"	"11889"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"430.3"	""	"387.9"	""	"435.7"	""	"647.4"	""	"715.5"	"727.7"	""	"361"	"40"	"32.000"	"25.000"	"0.00166141147701448"	"18"	"0"	"5.979E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAGPASVPLR"	"[K].qAGPASVPLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"612.86658"	"1224.72588"	"1224.72619"	"-0.25"	"-0.00015"	"8/90"	"8"	"90"	"8592570.80963135"	"HCD"	"MS2"	"0"	"302.9"	"100.000"	"41.7486"	"11971"	"11971"	"11954"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"367.5"	""	"336.0"	""	"363.8"	""	"568.1"	""	"612.9"	"631.7"	""	"339"	"47"	"32.000"	"25.000"	"0.000369121806413861"	"19"	"0"	"9.224E-05"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLSGMSGSR"	"[K].aDLSGmSGSR.[D]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"613.30530"	"1225.60332"	"1225.60442"	"-0.90"	"-0.00055"	"9/86"	"9"	"86"	"663399.457946777"	"HCD"	"MS2"	"21.10241"	"37.4"	"100.000"	"25.0456"	"5193"	"5193"	"5176"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.5"	""	"38.7"	""	"43.4"	""	"82.3"	"1.4"	"77.3"	"68.5"	""	"418"	"40"	"33.000"	"26.000"	"0.00200976966182186"	"16"	"0"	"0.002411"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLSGMSGSR"	"[K].aDLSGmSGSR.[D]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"613.30615"	"1225.60503"	"1225.60442"	"0.50"	"0.00031"	"9/86"	"9"	"86"	"727539.734436035"	"HCD"	"MS2"	"23.27118"	"43.5"	"100.000"	"24.9488"	"5169"	"5169"	"5153"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.0"	""	"44.2"	""	"48.7"	""	"104.9"	"0.5"	"76.1"	"79.9"	""	"432"	"36"	"33.000"	"26.000"	"0.00564226852550229"	"15"	"0.0004639"	"0.00773"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FELDTSER"	"[K].fELDTSER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"613.31738"	"1225.62749"	"1225.62620"	"1.05"	"0.00065"	"6/66"	"6"	"66"	"2281677.00744629"	"HCD"	"MS2"	"27.63089"	"117.9"	"100.000"	"58.0357"	"18612"	"18612"	"18591"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"160.8"	""	"118.4"	""	"110.1"	""	"222.0"	""	"253.9"	"258.2"	""	"497"	"31"	"33.000"	"26.000"	"0.0183791910851972"	"22"	"0.0002479"	"0.005657"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FELDTSER"	"[K].fELDTSER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"613.31750"	"1225.62773"	"1225.62620"	"1.25"	"0.00077"	"6/66"	"6"	"66"	"1924185.85351563"	"HCD"	"MS2"	"33.82133"	"97.8"	"100.000"	"58.1782"	"18656"	"18656"	"18639"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.6"	""	"116.7"	""	"105.5"	""	"187.0"	""	"203.8"	"197.1"	""	"501"	"29"	"33.000"	"26.000"	"0.0297035071415874"	"20"	"0.0003538"	"0.006166"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDIHEVR"	"[K].dIDIHEVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"613.33984"	"1225.67241"	"1225.67382"	"-1.15"	"-0.00070"	"5/66"	"5"	"66"	"859335.190917969"	"HCD"	"MS2"	"21.45234"	"62.6"	"100.000"	"42.2839"	"12200"	"12200"	"12172"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"92.6"	""	"69.3"	""	"64.3"	""	"115.4"	"0.5"	"128.4"	"123.9"	""	"499"	"24"	"33.000"	"26.000"	"0.107664009668527"	"15"	"0.0008629"	"0.009601"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDIHEVR"	"[K].dIDIHEVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"409.22903"	"1225.67255"	"1225.67382"	"-1.03"	"-0.00042"	"7/66"	"7"	"66"	"7754153.43414307"	"HCD"	"MS2"	"26.53076"	"233.5"	"100.000"	"42.1070"	"12127"	"12127"	"12108"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"328.2"	""	"195.4"	""	"211.1"	""	"408.5"	""	"445.3"	"636.4"	""	"499"	"44"	"33.000"	"26.000"	"0.00106186804076869"	"23"	"0"	"0.002616"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDIHEVR"	"[K].dIDIHEVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"409.22916"	"1225.67292"	"1225.67382"	"-0.73"	"-0.00030"	"6/66"	"6"	"66"	"2716265.62530518"	"HCD"	"MS2"	"15.7807"	"88.6"	"100.000"	"42.5463"	"12296"	"12296"	"12277"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"134.7"	""	"83.7"	""	"83.8"	""	"163.9"	""	"191.3"	"190.9"	""	"498"	"45"	"33.000"	"26.000"	"0.000843721948786614"	"21"	"0.000936"	"0.0117"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDIHEVR"	"[K].dIDIHEVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"409.22925"	"1225.67319"	"1225.67382"	"-0.51"	"-0.00021"	"9/66"	"9"	"66"	"3120424.35412598"	"HCD"	"MS2"	"11.47787"	"99.9"	"100.000"	"42.4128"	"12253"	"12253"	"12236"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"137.4"	""	"99.7"	""	"103.0"	""	"170.9"	""	"211.3"	"227.3"	""	"486"	"32"	"33.000"	"26.000"	"0.014408085387294"	"15"	"0.001211"	"0.0149"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDIHEVR"	"[K].dIDIHEVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"409.22931"	"1225.67337"	"1225.67382"	"-0.36"	"-0.00015"	"7/66"	"7"	"66"	"6685685.47454834"	"HCD"	"MS2"	"30.7737"	"211.6"	"100.000"	"42.2225"	"12164"	"12164"	"12145"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"300.0"	""	"189.2"	""	"181.6"	""	"376.3"	""	"399.2"	"571.7"	""	"484"	"46"	"33.000"	"26.000"	"0.000655866374917584"	"24"	"0"	"0.001685"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITINDLPVGR"	"[R].QITINDLPVGR.[S]"	""	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"613.34796"	"1225.68865"	"1225.68991"	"-1.03"	"-0.00063"	"6/106"	"6"	"106"	"422653.68371582"	"HCD"	"MS2"	"21.97438"	"1.3"	"100.000"	"104.3561"	"36342"	"36342"	"36338"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	"2.3"	""	""	""	"3.2"	""	"4.2"	"3.1"	"NoQuanLabels"	"466"	"46"	"33.000"	"26.000"	"0.000525237736431516"	"21"	"0"	"0.003492"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITLNDLPVGR"	"[R].QITLNDLPVGR.[S]"	""	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"613.34796"	"1225.68865"	"1225.68991"	"-1.03"	"-0.00063"	"6/106"	"6"	"106"	"422653.68371582"	"HCD"	"MS2"	"21.97438"	"1.3"	"100.000"	"104.3561"	"36342"	"36342"	"36338"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	"2.3"	""	""	""	"3.2"	""	"4.2"	"3.1"	"NoQuanLabels"	"466"	"46"	"33.000"	"26.000"	"0.000525237736431516"	"21"	"0"	"0.003492"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITINDLPVGR"	"[R].QITINDLPVGR.[S]"	""	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"613.34808"	"1225.68889"	"1225.68991"	"-0.83"	"-0.00051"	"7/106"	"7"	"106"	"504354.347900391"	"HCD"	"MS2"	"42.40329"	"3.5"	"100.000"	"103.8688"	"36127"	"36127"	"36123"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.9"	""	"4.3"	""	"5.2"	""	"3.9"	""	"7.9"	"6.2"	"NoQuanLabels"	"466"	"36"	"33.000"	"26.000"	"0.00532544521186475"	"15"	"0.0006732"	"0.008919"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITLNDLPVGR"	"[R].QITLNDLPVGR.[S]"	""	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"613.34808"	"1225.68889"	"1225.68991"	"-0.83"	"-0.00051"	"7/106"	"7"	"106"	"504354.347900391"	"HCD"	"MS2"	"42.40329"	"3.5"	"100.000"	"103.8688"	"36127"	"36127"	"36123"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.9"	""	"4.3"	""	"5.2"	""	"3.9"	""	"7.9"	"6.2"	"NoQuanLabels"	"466"	"36"	"33.000"	"26.000"	"0.00532544521186475"	"15"	"0.0006732"	"0.008919"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITINDLPVGR"	"[R].QITINDLPVGR.[S]"	""	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"613.34814"	"1225.68901"	"1225.68991"	"-0.73"	"-0.00045"	"7/106"	"7"	"106"	"289401.743530273"	"HCD"	"MS2"	"15.97018"	"1.7"	"100.000"	"104.4163"	"36297"	"36297"	"36291"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.6"	""	"1.5"	""	"3.0"	""	"3.5"	""	"3.1"	""	"NoQuanLabels"	"466"	"37"	"33.000"	"26.000"	"0.00513281865891455"	"23"	"0.001546"	"0.01886"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITLNDLPVGR"	"[R].QITLNDLPVGR.[S]"	""	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"613.34814"	"1225.68901"	"1225.68991"	"-0.73"	"-0.00045"	"7/106"	"7"	"106"	"289401.743530273"	"HCD"	"MS2"	"15.97018"	"1.7"	"100.000"	"104.4163"	"36297"	"36297"	"36291"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.6"	""	"1.5"	""	"3.0"	""	"3.5"	""	"3.1"	""	"NoQuanLabels"	"466"	"37"	"33.000"	"26.000"	"0.00513281865891455"	"23"	"0.001546"	"0.01886"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITINDLPVGR"	"[R].QITINDLPVGR.[S]"	""	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"613.34827"	"1225.68926"	"1225.68991"	"-0.53"	"-0.00033"	"8/106"	"8"	"106"	"575897.624145508"	"HCD"	"MS2"	"28.00399"	"21.2"	"100.000"	"69.1071"	"23079"	"23079"	"23054"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.5"	""	"23.6"	""	"30.3"	""	"34.1"	"1.1"	"38.3"	"41.6"	"NoQuanLabels"	"451"	"24"	"33.000"	"26.000"	"0.0979820555506893"	"14"	"0.001374"	"0.01739"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITLNDLPVGR"	"[R].QITLNDLPVGR.[S]"	""	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"613.34827"	"1225.68926"	"1225.68991"	"-0.53"	"-0.00033"	"8/106"	"8"	"106"	"575897.624145508"	"HCD"	"MS2"	"28.00399"	"21.2"	"100.000"	"69.1071"	"23079"	"23079"	"23054"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.5"	""	"23.6"	""	"30.3"	""	"34.1"	"1.1"	"38.3"	"41.6"	"NoQuanLabels"	"451"	"24"	"33.000"	"26.000"	"0.0979820555506893"	"14"	"0.001374"	"0.01739"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITINDLPVGR"	"[R].QITINDLPVGR.[S]"	""	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"613.34827"	"1225.68926"	"1225.68991"	"-0.53"	"-0.00033"	"7/106"	"7"	"106"	"2404990.06060791"	"HCD"	"MS2"	"5.197014"	"2.3"	"100.000"	"104.0962"	"36265"	"36265"	"36261"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.5"	""	"2.8"	""	"3.1"	""	"3.1"	""	"3.6"	"4.5"	"NoQuanLabels"	"451"	"63"	"33.000"	"26.000"	"1.11467059915531E-05"	"24"	"0"	"0.001734"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITLNDLPVGR"	"[R].QITLNDLPVGR.[S]"	""	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"613.34827"	"1225.68926"	"1225.68991"	"-0.53"	"-0.00033"	"7/106"	"7"	"106"	"2404990.06060791"	"HCD"	"MS2"	"5.197014"	"2.3"	"100.000"	"104.0962"	"36265"	"36265"	"36261"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.5"	""	"2.8"	""	"3.1"	""	"3.1"	""	"3.6"	"4.5"	"NoQuanLabels"	"451"	"63"	"33.000"	"26.000"	"1.11467059915531E-05"	"24"	"0"	"0.001734"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITINDLPVGR"	"[R].QITINDLPVGR.[S]"	""	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"613.34833"	"1225.68938"	"1225.68991"	"-0.43"	"-0.00027"	"7/106"	"7"	"106"	"2191703.95880127"	"HCD"	"MS2"	"6.212637"	"1.8"	"100.000"	"104.1267"	"36204"	"36204"	"36201"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.2"	""	"2.4"	""	"1.9"	""	"4.4"	""	"2.2"	"3.6"	"NoQuanLabels"	"451"	"59"	"33.000"	"26.000"	"3.09846465365322E-05"	"20"	"0"	"0.001454"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITLNDLPVGR"	"[R].QITLNDLPVGR.[S]"	""	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"613.34833"	"1225.68938"	"1225.68991"	"-0.43"	"-0.00027"	"7/106"	"7"	"106"	"2191703.95880127"	"HCD"	"MS2"	"6.212637"	"1.8"	"100.000"	"104.1267"	"36204"	"36204"	"36201"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.2"	""	"2.4"	""	"1.9"	""	"4.4"	""	"2.2"	"3.6"	"NoQuanLabels"	"451"	"59"	"33.000"	"26.000"	"3.09846465365322E-05"	"20"	"0"	"0.001454"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITINDLPVGR"	"[R].QITINDLPVGR.[S]"	""	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"613.34839"	"1225.68950"	"1225.68991"	"-0.34"	"-0.00021"	"6/106"	"6"	"106"	"624011.931274414"	"HCD"	"MS2"	"39.55431"	"18.8"	"100.000"	"69.3462"	"23162"	"23162"	"23139"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.7"	""	"17.1"	""	"24.4"	""	"34.9"	""	"43.6"	"38.8"	"NoQuanLabels"	"451"	"21"	"33.000"	"26.000"	"0.171453575450011"	"20"	"0.001886"	"0.02151"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITLNDLPVGR"	"[R].QITLNDLPVGR.[S]"	""	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"613.34839"	"1225.68950"	"1225.68991"	"-0.34"	"-0.00021"	"6/106"	"6"	"106"	"624011.931274414"	"HCD"	"MS2"	"39.55431"	"18.8"	"100.000"	"69.3462"	"23162"	"23162"	"23139"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.7"	""	"17.1"	""	"24.4"	""	"34.9"	""	"43.6"	"38.8"	"NoQuanLabels"	"451"	"21"	"33.000"	"26.000"	"0.171453575450011"	"20"	"0.001886"	"0.02151"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITINDLPVGR"	"[R].QITINDLPVGR.[S]"	""	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"613.34857"	"1225.68987"	"1225.68991"	"-0.04"	"-0.00002"	"7/106"	"7"	"106"	"583604.424499512"	"HCD"	"MS2"	"40.01733"	"4.0"	"100.000"	"103.8361"	"36190"	"36190"	"36187"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.0"	""	"4.7"	""	"4.1"	""	"4.0"	""	"8.8"	"9.6"	"NoQuanLabels"	"456"	"44"	"33.000"	"26.000"	"0.00093742136411831"	"16"	"0.0002479"	"0.005931"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITLNDLPVGR"	"[R].QITLNDLPVGR.[S]"	""	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"613.34857"	"1225.68987"	"1225.68991"	"-0.04"	"-0.00002"	"7/106"	"7"	"106"	"583604.424499512"	"HCD"	"MS2"	"40.01733"	"4.0"	"100.000"	"103.8361"	"36190"	"36190"	"36187"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.0"	""	"4.7"	""	"4.1"	""	"4.0"	""	"8.8"	"9.6"	"NoQuanLabels"	"456"	"44"	"33.000"	"26.000"	"0.00093742136411831"	"16"	"0.0002479"	"0.005931"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGDLMAYDR"	"[R].gGDLMAYDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"613.80536"	"1226.60344"	"1226.60369"	"-0.20"	"-0.00012"	"8/74"	"8"	"74"	"3307761.49609375"	"HCD"	"MS2"	"6.007521"	"182.5"	"100.000"	"51.5343"	"15951"	"15951"	"15931"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"303.6"	""	"238.1"	""	"207.3"	""	"241.6"	""	"379.8"	"363.1"	""	"422"	"54"	"33.000"	"26.000"	"7.64332726659235E-05"	"20"	"0"	"0.0001916"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGDLMAYDR"	"[R].gGDLMAYDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"613.80548"	"1226.60369"	"1226.60369"	"0.00"	"0.00000"	"8/74"	"8"	"74"	"1951695.17510986"	"HCD"	"MS2"	"11.42007"	"108.1"	"100.000"	"51.1533"	"15807"	"15807"	"15783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"180.9"	""	"136.9"	""	"117.7"	""	"166.9"	""	"214.1"	"210.8"	""	"422"	"44"	"33.000"	"26.000"	"0.000929570761998827"	"19"	"0"	"0.0001825"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGDLMAYDR"	"[R].gGDLMAYDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.80554"	"1226.60381"	"1226.60369"	"0.10"	"0.00006"	"8/74"	"8"	"74"	"1481204.20123291"	"HCD"	"MS2"	"6.031391"	"91.8"	"100.000"	"51.8519"	"16081"	"16081"	"16059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"138.5"	""	"115.0"	""	"109.0"	""	"127.4"	"0.5"	"196.1"	"184.8"	""	"422"	"32"	"33.000"	"26.000"	"0.0126264846557728"	"15"	"0"	"0.0006092"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGDLMAYDR"	"[R].gGDLMAYDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"613.80554"	"1226.60381"	"1226.60369"	"0.10"	"0.00006"	"8/74"	"8"	"74"	"3081955.25128174"	"HCD"	"MS2"	"0"	"163.8"	"100.000"	"51.4437"	"15926"	"15926"	"15909"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"265.5"	""	"215.3"	""	"192.1"	""	"222.6"	""	"333.1"	"326.5"	""	"422"	"43"	"33.000"	"26.000"	"0.00110479692119593"	"21"	"0"	"0.0002045"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYQSITER"	"[R].tYQSITER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62824"	"Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1"	"Q62824"	"Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"613.83191"	"1226.65654"	"1226.65783"	"-1.05"	"-0.00065"	"6/78"	"6"	"78"	"1359530.76391602"	"HCD"	"MS2"	"20.27682"	"90.2"	"100.000"	"36.4265"	"9819"	"9819"	"9795"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"118.2"	""	"120.0"	""	"119.6"	""	"158.5"	""	"185.5"	"159.1"	""	"541"	"29"	"34.000"	"27.000"	"0.0320750446379216"	"16"	"0.001211"	"0.01448"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYQSITER"	"[R].tYQSITER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62824"	"Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1"	"Q62824"	"Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"613.83246"	"1226.65764"	"1226.65783"	"-0.16"	"-0.00010"	"6/78"	"6"	"78"	"1112837.57971191"	"HCD"	"MS2"	"23.38187"	"80.4"	"100.000"	"36.5862"	"9878"	"9878"	"9848"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"124.2"	""	"102.8"	""	"101.9"	""	"138.7"	"0.4"	"150.2"	"143.9"	""	"522"	"33"	"34.000"	"27.000"	"0.0120681446585207"	"17"	"0"	"0.002645"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSSQHQAR"	"[R].aLSSQHQAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"613.84351"	"1226.67974"	"1226.68030"	"-0.46"	"-0.00028"	"8/74"	"8"	"74"	"449317.804260254"	"HCD"	"MS2"	"0"	"27.7"	"100.000"	"19.0515"	"2809"	"2809"	"2789"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.5"	""	"32.1"	""	"32.1"	""	"59.0"	""	"46.7"	"49.3"	""	"556"	"28"	"34.000"	"27.000"	"0.0433555595785893"	"24"	"0"	"0.000792"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSSQHQAR"	"[R].aLSSQHQAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"613.84369"	"1226.68010"	"1226.68030"	"-0.16"	"-0.00010"	"8/74"	"8"	"74"	"603749.769287109"	"HCD"	"MS2"	"0"	"37.2"	"100.000"	"19.0725"	"2814"	"2814"	"2793"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"70.2"	""	"39.9"	""	"51.8"	""	"67.6"	"0.1"	"65.0"	"56.7"	""	"557"	"30"	"34.000"	"27.000"	"0.0304666848006778"	"26"	"0"	"0.002771"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSSQHQAR"	"[R].aLSSQHQAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"409.56491"	"1226.68018"	"1226.68030"	"-0.10"	"-0.00004"	"11/74"	"11"	"74"	"2658062.77038574"	"HCD"	"MS2"	"9.786689"	"124.4"	"100.000"	"19.0489"	"2808"	"2808"	"2789"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"183.5"	""	"168.4"	""	"193.1"	""	"178.7"	"3.0"	"240.1"	"211.2"	""	"557"	"30"	"34.000"	"27.000"	"0.0254580537749465"	"18"	"0.0008629"	"0.009629"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSSQHQAR"	"[R].aLSSQHQAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"409.56747"	"1226.68787"	"1226.68030"	"6.17"	"0.00252"	"8/74"	"8"	"74"	"5251624.43908691"	"HCD"	"MS2"	"46.779"	"171.2"	"100.000"	"19.0288"	"2796"	"2796"	"2777"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"292.2"	""	"214.1"	""	"247.5"	""	"267.3"	"0.5"	"302.3"	"295.6"	""	"595"	"44"	"34.000"	"27.000"	"0.00107272146298939"	"22"	"0"	"0.003116"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGEAQVK"	"[K].hGEAQVk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"613.86572"	"1226.72417"	"1226.72574"	"-1.28"	"-0.00079"	"12/52"	"12"	"52"	"4513085.49981689"	"HCD"	"MS2"	"0"	"342.7"	"100.000"	"20.6612"	"3439"	"3439"	"3425"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"525.6"	""	"372.7"	""	"436.9"	""	"628.7"	""	"639.2"	"648.8"	""	"349"	"38"	"32.000"	"25.000"	"0.00248196373352932"	"22"	"0.002467"	"0.02494"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGEAQVK"	"[K].hGEAQVk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"613.86627"	"1226.72527"	"1226.72574"	"-0.39"	"-0.00024"	"12/52"	"12"	"52"	"4893544.17706299"	"HCD"	"MS2"	"0"	"366.5"	"100.000"	"20.7081"	"3443"	"3443"	"3433"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"561.4"	""	"372.5"	""	"466.2"	""	"642.9"	""	"711.5"	"723.2"	""	"342"	"39"	"32.000"	"25.000"	"0.00236045709247093"	"20"	"0.001812"	"0.02081"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLPELGIK"	"[K].EVLPELGIk.[K]"	"K9(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"613.88104"	"1226.75481"	"1226.75576"	"-0.77"	"-0.00047"	"6/72"	"6"	"72"	"146383.524963379"	"HCD"	"MS2"	"20.545"	"9.1"	"100.000"	"83.4947"	"28877"	"28877"	"28862"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.4"	""	"6.8"	""	"15.2"	""	"12.0"	""	"19.1"	"18.2"	""	"252"	"42"	"31.000"	"24.000"	"0.000800516974133197"	"23"	"0.0006732"	"0.008714"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVEDMFSR"	"[K].dVEDMFSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"614.29645"	"1227.58562"	"1227.58770"	"-1.70"	"-0.00104"	"6/68"	"6"	"68"	"744188.779418945"	"HCD"	"MS2"	"22.14029"	"42.7"	"100.000"	"71.9533"	"24238"	"24238"	"24214"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"76.3"	""	"38.0"	""	"43.8"	""	"66.7"	"3.9"	"85.0"	"91.3"	""	"282"	"35"	"31.000"	"24.000"	"0.00495700221144901"	"19"	"0"	"0.001841"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVEDMFSR"	"[K].dVEDMFSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"614.29688"	"1227.58647"	"1227.58770"	"-1.00"	"-0.00062"	"6/68"	"6"	"68"	"787812.867431641"	"HCD"	"MS2"	"0"	"41.4"	"100.000"	"72.4134"	"24412"	"24412"	"24393"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.7"	""	"32.6"	""	"44.6"	""	"63.5"	""	"92.2"	"96.3"	""	"288"	"34"	"31.000"	"24.000"	"0.005437039549326"	"19"	"0"	"0.002446"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVEDMFSR"	"[K].dVEDMFSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.29706"	"1227.58684"	"1227.58770"	"-0.70"	"-0.00043"	"5/68"	"5"	"68"	"1031029.54833984"	"HCD"	"MS2"	"0"	"54.8"	"100.000"	"72.2459"	"24358"	"24358"	"24341"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"93.6"	""	"44.3"	""	"51.3"	""	"77.7"	"0.2"	"119.6"	"134.4"	""	"288"	"27"	"31.000"	"24.000"	"0.0275652853203037"	"14"	"0.0002479"	"0.005153"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVEDMFSR"	"[K].dVEDMFSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"614.29742"	"1227.58757"	"1227.58770"	"-0.11"	"-0.00007"	"6/68"	"6"	"68"	"884544.00390625"	"HCD"	"MS2"	"9.830437"	"50.2"	"100.000"	"72.1052"	"24286"	"24286"	"24266"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.6"	""	"42.5"	""	"53.0"	""	"75.6"	""	"112.6"	"109.1"	""	"296"	"34"	"31.000"	"24.000"	"0.0056268030655443"	"19"	"0"	"0.002833"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEmATR.[A]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"614.31403"	"1227.62078"	"1227.62409"	"-2.70"	"-0.00166"	"5/68"	"5"	"68"	"528135.56854248"	"HCD"	"MS2"	"22.60213"	"34.1"	"100.000"	"52.7571"	"16462"	"16462"	"16434"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.8"	""	"41.3"	""	"44.1"	""	"57.0"	"0.1"	"69.8"	"64.4"	""	"423"	"21"	"33.000"	"26.000"	"0.154635916156743"	"18"	"0.008437"	"0.1021"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEmATR.[A]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"614.31451"	"1227.62175"	"1227.62409"	"-1.90"	"-0.00117"	"12/68"	"12"	"68"	"8145748.8861084"	"HCD"	"MS2"	"7.005605"	"305.3"	"100.000"	"43.7016"	"12777"	"12777"	"12760"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"321.3"	""	"318.8"	""	"345.6"	""	"845.7"	"1.6"	"565.1"	"495.9"	""	"419"	"26"	"33.000"	"26.000"	"0.0563876541422689"	"22"	"0.004867"	"0.05167"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEmATR.[A]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"614.31488"	"1227.62248"	"1227.62409"	"-1.31"	"-0.00080"	"12/68"	"12"	"68"	"8663195.43786621"	"HCD"	"MS2"	"6.856329"	"350.1"	"100.000"	"43.8008"	"12806"	"12806"	"12796"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"337.2"	""	"370.3"	""	"417.1"	""	"961.9"	""	"643.8"	"591.8"	""	"418"	"26"	"33.000"	"26.000"	"0.0557373460884989"	"22"	"0.004938"	"0.0526"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEmATR.[A]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"614.31488"	"1227.62248"	"1227.62409"	"-1.31"	"-0.00080"	"6/68"	"6"	"68"	"10045564.0405273"	"HCD"	"MS2"	"31.93459"	"465.4"	"100.000"	"43.4173"	"12662"	"12662"	"12649"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"430.6"	""	"430.7"	""	"476.3"	""	"1105.9"	""	"1068.6"	"922.7"	""	"418"	"20"	"33.000"	"26.000"	"0.197763566725451"	"21"	"0.003717"	"0.03864"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEmATR.[A]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"614.31537"	"1227.62346"	"1227.62409"	"-0.51"	"-0.00031"	"12/68"	"12"	"68"	"863330.287536621"	"HCD"	"MS2"	"0"	"45.5"	"100.000"	"53.4484"	"16733"	"16733"	"16706"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.5"	""	"60.0"	""	"67.1"	""	"76.7"	""	"88.8"	"78.5"	""	"423"	"14"	"33.000"	"26.000"	"0.77145459774766"	"15"	"0.00912"	"0.1188"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEmATR.[A]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"614.31537"	"1227.62346"	"1227.62409"	"-0.51"	"-0.00031"	"5/68"	"5"	"68"	"9618644.1184082"	"HCD"	"MS2"	"39.78994"	"474.6"	"100.000"	"43.5237"	"12696"	"12696"	"12682"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"448.1"	""	"422.9"	""	"503.0"	""	"1084.5"	""	"1060.6"	"997.8"	""	"423"	"21"	"33.000"	"26.000"	"0.155707801120137"	"22"	"0.005001"	"0.0562"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEmATR.[A]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"614.31604"	"1227.62480"	"1227.62409"	"0.58"	"0.00036"	"11/68"	"11"	"68"	"731526.450866699"	"HCD"	"MS2"	"51.86887"	"37.9"	"100.000"	"54.0787"	"16991"	"16991"	"16960"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.5"	""	"56.2"	""	"40.0"	""	"63.6"	"2.0"	"75.5"	"74.7"	""	"468"	"20"	"33.000"	"26.000"	"0.24900946626449"	"19"	"0.006769"	"0.07668"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLMk.[I]"	"K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.32770"	"1227.64812"	"1227.64924"	"-0.91"	"-0.00056"	"6/62"	"6"	"62"	"245428.796936035"	"HCD"	"MS2"	"16.76518"	"10.1"	"100.000"	"99.7042"	"34916"	"34916"	"34909"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.8"	""	"21.5"	""	"14.9"	""	"12.8"	""	"14.2"	"17.1"	""	"518"	"46"	"34.000"	"27.000"	"0.000697107514217071"	"15"	"0.00447"	"0.0485"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLMk.[I]"	"K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"614.32825"	"1227.64922"	"1227.64924"	"-0.02"	"-0.00001"	"5/62"	"5"	"62"	"218665.519836426"	"HCD"	"MS2"	"17.11423"	"9.8"	"100.000"	"99.7139"	"34884"	"34884"	"34881"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.6"	""	"14.1"	""	"15.9"	""	"9.1"	""	"16.4"	"23.2"	""	"506"	"30"	"34.000"	"27.000"	"0.0244974297634096"	"22"	"0.003922"	"0.03948"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLMk.[I]"	"K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.32831"	"1227.64934"	"1227.64924"	"0.08"	"0.00005"	"6/62"	"6"	"62"	"509016.846252441"	"HCD"	"MS2"	"5.839398"	"19.4"	"100.000"	"99.9567"	"34997"	"34997"	"34993"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.9"	""	"25.9"	""	"31.8"	""	"21.6"	""	"36.8"	"41.0"	""	"506"	"43"	"34.000"	"27.000"	"0.00121932792799157"	"15"	"0.001546"	"0.01905"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLMk.[I]"	"K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"614.32861"	"1227.64995"	"1227.64924"	"0.58"	"0.00035"	"5/62"	"5"	"62"	"404850.787658691"	"HCD"	"MS2"	"7.857474"	"16.8"	"100.000"	"99.9745"	"34960"	"34960"	"34958"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.7"	""	"26.4"	""	"31.3"	""	"11.4"	""	"36.3"	"35.3"	""	"506"	"38"	"34.000"	"27.000"	"0.0036569626199872"	"20"	"0.003189"	"0.03193"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGMGTSVER"	"[R].yGMGTSVER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"614.81274"	"1228.61821"	"1228.61934"	"-0.92"	"-0.00056"	"6/70"	"6"	"70"	"1674725.55950928"	"HCD"	"MS2"	"7.181337"	"109.6"	"100.000"	"38.9306"	"10834"	"10834"	"10812"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"152.3"	""	"124.8"	""	"149.6"	""	"149.7"	""	"227.3"	"237.9"	""	"492"	"26"	"33.000"	"26.000"	"0.0669784521787167"	"17"	"0"	"0.001267"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGMGTSVER"	"[R].yGMGTSVER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"614.81281"	"1228.61833"	"1228.61934"	"-0.82"	"-0.00050"	"7/70"	"7"	"70"	"3149581.29815674"	"HCD"	"MS2"	"19.28691"	"166.3"	"100.000"	"38.8165"	"10778"	"10778"	"10757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"272.0"	""	"208.7"	""	"233.7"	""	"171.9"	"1.2"	"317.3"	"371.8"	""	"477"	"47"	"33.000"	"26.000"	"0.000457602494649864"	"20"	"0"	"0.0004621"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGMGTSVER"	"[R].yGMGTSVER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"614.81299"	"1228.61870"	"1228.61934"	"-0.52"	"-0.00032"	"7/70"	"7"	"70"	"2984242.48638916"	"HCD"	"MS2"	"36.16598"	"163.9"	"100.000"	"38.5994"	"10699"	"10699"	"10672"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"265.0"	""	"218.2"	""	"219.4"	""	"174.2"	"0.6"	"319.3"	"357.5"	""	"483"	"47"	"33.000"	"26.000"	"0.000474151506855905"	"21"	"0"	"0.0003778"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGMGTSVER"	"[R].yGMGTSVER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"614.81348"	"1228.61968"	"1228.61934"	"0.28"	"0.00017"	"8/70"	"8"	"70"	"1686922.49725342"	"HCD"	"MS2"	"7.832932"	"113.7"	"100.000"	"39.1246"	"10904"	"10904"	"10884"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"153.6"	""	"131.6"	""	"147.6"	""	"155.1"	"1.0"	"248.3"	"242.5"	""	"487"	"28"	"33.000"	"26.000"	"0.038770282503696"	"20"	"0.0001301"	"0.003849"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLEEPSLR"	"[K].rLEEPSLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"1"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"410.24490"	"1228.72016"	"1228.72110"	"-0.77"	"-0.00031"	"7/76"	"7"	"76"	"2737764.16040039"	"HCD"	"MS2"	"7.969153"	"95.2"	"100.000"	"36.3829"	"9801"	"9801"	"9783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"131.3"	""	"125.2"	""	"139.4"	""	"146.4"	""	"180.9"	"180.1"	""	"467"	"35"	"33.000"	"26.000"	"0.00676529727728259"	"25"	"0.003653"	"0.03758"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLEEPSLR"	"[K].rLEEPSLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"1"	"3"	"3"	"0.7317"	"0.0000"	"1"	"1"	"1"	"410.24509"	"1228.72071"	"1228.72110"	"-0.32"	"-0.00013"	"7/76"	"7"	"76"	"2792860.6027832"	"HCD"	"MS2"	"11.60637"	"94.8"	"100.000"	"36.5747"	"9873"	"9873"	"9848"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"144.8"	""	"127.7"	""	"129.1"	""	"152.4"	"0.3"	"162.8"	"180.3"	""	"439"	"41"	"33.000"	"26.000"	"0.00188553467970434"	"26"	"0.000936"	"0.01166"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLADDWAR"	"[R].gPLADDWAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2N3"	"Membrane-associated phosphatidylinositol transfer protein 1 OS=Rattus norvegicus OX=10116 GN=Pitpnm1 PE=1 SV=1"	"Q5U2N3"	"Membrane-associated phosphatidylinositol transfer protein 1 OS=Rattus norvegicus OX=10116 GN=Pitpnm1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"615.32648"	"1229.64568"	"1229.64760"	"-1.57"	"-0.00096"	"6/66"	"6"	"66"	"489172.847473145"	"HCD"	"MS2"	"0"	"28.7"	"100.000"	"64.6927"	"21285"	"21285"	"21263"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.3"	""	"39.1"	""	"46.4"	""	"47.4"	""	"41.9"	"57.6"	""	"469"	"30"	"33.000"	"26.000"	"0.0217341593582457"	"14"	"0.001886"	"0.02156"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLADDWAR"	"[R].gPLADDWAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2N3"	"Membrane-associated phosphatidylinositol transfer protein 1 OS=Rattus norvegicus OX=10116 GN=Pitpnm1 PE=1 SV=1"	"Q5U2N3"	"Membrane-associated phosphatidylinositol transfer protein 1 OS=Rattus norvegicus OX=10116 GN=Pitpnm1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"615.32654"	"1229.64580"	"1229.64760"	"-1.47"	"-0.00090"	"6/66"	"6"	"66"	"458938.660217285"	"HCD"	"MS2"	"17.48082"	"30.9"	"100.000"	"64.8516"	"21331"	"21331"	"21303"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.4"	""	"38.4"	""	"43.5"	""	"52.3"	"0.2"	"53.6"	"59.7"	""	"469"	"23"	"33.000"	"26.000"	"0.12976060061109"	"14"	"0.001134"	"0.01369"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AENLGEVLR"	"[K].aENLGEVLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLL4"	"Transmembrane 9 superfamily member 4 OS=Rattus norvegicus OX=10116 GN=Tm9sf4 PE=2 SV=1"	"Q4KLL4"	"Transmembrane 9 superfamily member 4 OS=Rattus norvegicus OX=10116 GN=Tm9sf4 PE=2 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"615.35522"	"1229.70317"	"1229.70512"	"-1.58"	"-0.00097"	"7/84"	"7"	"84"	"915658.758605957"	"HCD"	"MS2"	"27.40763"	"44.1"	"100.000"	"63.3973"	"20758"	"20758"	"20731"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.9"	""	"54.2"	""	"57.1"	""	"72.0"	""	"81.8"	"83.8"	""	"602"	"29"	"34.000"	"27.000"	"0.0398626802093594"	"24"	"0"	"0.001283"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AENLGEVLR"	"[K].aENLGEVLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLL4"	"Transmembrane 9 superfamily member 4 OS=Rattus norvegicus OX=10116 GN=Tm9sf4 PE=2 SV=1"	"Q4KLL4"	"Transmembrane 9 superfamily member 4 OS=Rattus norvegicus OX=10116 GN=Tm9sf4 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"615.35547"	"1229.70366"	"1229.70512"	"-1.18"	"-0.00073"	"8/84"	"8"	"84"	"1006794.47235107"	"HCD"	"MS2"	"7.015194"	"51.3"	"100.000"	"63.6853"	"20875"	"20875"	"20856"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.9"	""	"58.6"	""	"66.3"	""	"92.5"	""	"101.6"	"96.1"	""	"598"	"27"	"34.000"	"27.000"	"0.0532931251466979"	"24"	"0"	"0.001507"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AENLGEVLR"	"[K].aENLGEVLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLL4"	"Transmembrane 9 superfamily member 4 OS=Rattus norvegicus OX=10116 GN=Tm9sf4 PE=2 SV=1"	"Q4KLL4"	"Transmembrane 9 superfamily member 4 OS=Rattus norvegicus OX=10116 GN=Tm9sf4 PE=2 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"615.35565"	"1229.70403"	"1229.70512"	"-0.89"	"-0.00054"	"11/84"	"11"	"84"	"893939.954467773"	"HCD"	"MS2"	"25.90204"	"45.7"	"100.000"	"63.5118"	"20790"	"20790"	"20763"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.4"	""	"55.8"	""	"69.7"	""	"72.5"	"0.6"	"80.9"	"93.0"	""	"602"	"27"	"34.000"	"27.000"	"0.0653983054837987"	"21"	"0"	"0.003312"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAEAELALR"	"[R].qAEAELALR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"615.35565"	"1229.70403"	"1229.70512"	"-0.89"	"-0.00054"	"7/84"	"7"	"84"	"2112983.42205811"	"HCD"	"MS2"	"3.52827"	"96.4"	"100.000"	"50.0304"	"15351"	"15351"	"15334"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"135.5"	""	"117.7"	""	"128.1"	""	"139.7"	"0.4"	"179.2"	"213.4"	""	"602"	"55"	"34.000"	"27.000"	"0.000105819692599018"	"24"	"0"	"0.0003424"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AENLGEVLR"	"[K].aENLGEVLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLL4"	"Transmembrane 9 superfamily member 4 OS=Rattus norvegicus OX=10116 GN=Tm9sf4 PE=2 SV=1"	"Q4KLL4"	"Transmembrane 9 superfamily member 4 OS=Rattus norvegicus OX=10116 GN=Tm9sf4 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"615.35583"	"1229.70439"	"1229.70512"	"-0.59"	"-0.00036"	"8/84"	"8"	"84"	"849633.72076416"	"HCD"	"MS2"	"14.73384"	"43.1"	"100.000"	"63.8022"	"20908"	"20908"	"20888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.3"	""	"48.5"	""	"55.3"	""	"79.0"	"0.0"	"88.4"	"82.4"	""	"603"	"28"	"34.000"	"27.000"	"0.0473464385506566"	""	"0"	"0.003464"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAEAELALR"	"[R].qAEAELALR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"615.35596"	"1229.70464"	"1229.70512"	"-0.39"	"-0.00024"	"7/84"	"7"	"84"	"2016314.42224121"	"HCD"	"MS2"	"3.314345"	"102.0"	"100.000"	"50.3580"	"15472"	"15472"	"15454"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"135.5"	""	"126.7"	""	"146.9"	""	"137.8"	"1.9"	"195.8"	"223.7"	""	"572"	"49"	"34.000"	"27.000"	"0.000336795308426951"	"25"	"0"	"0.0003325"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GESFYQDR"	"[R].gESFYQDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"615.80035"	"1230.59343"	"1230.59523"	"-1.46"	"-0.00090"	"6/70"	"6"	"70"	"1317081.81207275"	"HCD"	"MS2"	"0"	"87.4"	"100.000"	"37.5816"	"10285"	"10285"	"10276"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"148.2"	""	"96.4"	""	"101.3"	""	"152.7"	""	"161.9"	"167.9"	""	"288"	"35"	"31.000"	"24.000"	"0.00451193144301445"	"20"	"0"	"0.002302"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GESFYQDR"	"[R].gESFYQDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"615.80109"	"1230.59490"	"1230.59523"	"-0.27"	"-0.00017"	"11/70"	"11"	"70"	"1337482.95941162"	"HCD"	"MS2"	"0"	"84.4"	"100.000"	"37.7892"	"10363"	"10363"	"10348"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"132.8"	""	"86.7"	""	"104.8"	""	"146.8"	""	"172.0"	"162.6"	""	"307"	"29"	"31.000"	"24.000"	"0.019638503018818"	"19"	"0"	"0.002949"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSDQFYR"	"[R].sVSDQFYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"615.81970"	"1230.63213"	"1230.63162"	"0.41"	"0.00026"	"6/68"	"6"	"68"	"3365856.64093018"	"HCD"	"MS2"	"27.87451"	"158.8"	"100.000"	"48.2429"	"14609"	"14609"	"14590"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"225.0"	""	"207.3"	""	"198.0"	""	"285.7"	""	"299.3"	"289.7"	""	"461"	"18"	"33.000"	"26.000"	"0.402412006248176"	"17"	"0.001546"	"0.01867"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSDQFYR"	"[R].sVSDQFYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"615.81989"	"1230.63249"	"1230.63162"	"0.71"	"0.00044"	"6/68"	"6"	"68"	"3479359.05908203"	"HCD"	"MS2"	"22.79612"	"165.6"	"100.000"	"47.9607"	"14506"	"14506"	"14488"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"237.0"	""	"215.7"	""	"229.8"	""	"290.9"	""	"307.9"	"287.5"	""	"477"	"20"	"33.000"	"26.000"	"0.248592706910303"	"16"	"0.001812"	"0.02025"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFNAEVHR"	"[K].eFNAEVHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"615.82471"	"1230.64214"	"1230.64285"	"-0.58"	"-0.00036"	"6/74"	"6"	"74"	"990652.692077637"	"HCD"	"MS2"	"0"	"60.9"	"100.000"	"29.7413"	"7112"	"7112"	"7089"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.5"	""	"76.8"	""	"78.5"	""	"100.8"	""	"111.5"	"124.5"	""	"529"	"29"	"34.000"	"27.000"	"0.0323910984705605"	"16"	"0.001374"	"0.01621"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFNAEVHR"	"[K].eFNAEVHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"615.82513"	"1230.64299"	"1230.64285"	"0.11"	"0.00007"	"6/74"	"6"	"74"	"818750.02935791"	"HCD"	"MS2"	"11.52425"	"48.7"	"100.000"	"29.8268"	"7135"	"7135"	"7106"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"64.6"	""	"58.6"	""	"59.7"	""	"88.3"	"1.0"	"90.9"	"98.7"	""	"528"	"9"	"34.000"	"27.000"	"3.05213631938714"	"13"	"0.007018"	"0.08156"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFNAEVHR"	"[K].eFNAEVHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"410.88596"	"1230.64331"	"1230.64285"	"0.38"	"0.00015"	"8/74"	"8"	"74"	"7456181.53588867"	"HCD"	"MS2"	"15.99708"	"164.8"	"100.000"	"29.6616"	"7067"	"7067"	"7052"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"253.2"	""	"186.0"	""	"210.7"	""	"275.4"	""	"319.2"	"319.2"	""	"508"	"28"	"34.000"	"27.000"	"0.0372249151602802"	"17"	"0"	"0.003395"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFNAEVHR"	"[K].eFNAEVHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"410.88617"	"1230.64396"	"1230.64285"	"0.90"	"0.00037"	"8/74"	"8"	"74"	"8645714.3102417"	"HCD"	"MS2"	"19.46268"	"189.6"	"100.000"	"29.6541"	"7076"	"7076"	"7058"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"287.9"	""	"223.6"	""	"236.4"	""	"316.4"	""	"372.3"	"363.5"	""	"537"	"31"	"34.000"	"27.000"	"0.0198127285789664"	"19"	"0.0001301"	"0.003843"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNAADIENR"	"[R].vNAADIENR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"615.83539"	"1230.66350"	"1230.66398"	"-0.39"	"-0.00024"	"8/82"	"8"	"82"	"2336432.14093018"	"HCD"	"MS2"	"0"	"116.7"	"100.000"	"40.5538"	"11496"	"11496"	"11475"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"216.6"	""	"136.7"	""	"147.5"	""	"186.7"	"6.2"	"205.0"	"206.0"	""	"661"	"30"	"35.000"	"28.000"	"0.0314174884303401"	"26"	"0"	"0.001581"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNAADIENR"	"[R].vNAADIENR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"615.83594"	"1230.66460"	"1230.66398"	"0.50"	"0.00031"	"8/82"	"8"	"82"	"1864285.51977539"	"HCD"	"MS2"	"6.095437"	"96.4"	"100.000"	"40.7062"	"11548"	"11548"	"11528"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"172.5"	""	"101.9"	""	"126.5"	""	"157.8"	"3.6"	"183.3"	"167.0"	""	"699"	"33"	"35.000"	"28.000"	"0.0161602166979041"	""	"0"	"0.001181"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLAVDAPR"	"[K].eMLAVDAPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"615.83917"	"1230.67107"	"1230.67137"	"-0.25"	"-0.00015"	"7/74"	"7"	"74"	"1258818.16217041"	"HCD"	"MS2"	"46.71818"	"77.7"	"100.000"	"57.9200"	"18550"	"18550"	"18530"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"148.0"	""	"105.7"	""	"113.2"	""	"129.2"	"1.3"	"105.0"	"131.0"	""	"692"	"31"	"35.000"	"28.000"	"0.0276742652232432"	"25"	"0"	"0.0009846"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLAVDAPR"	"[K].eMLAVDAPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"615.83984"	"1230.67241"	"1230.67137"	"0.84"	"0.00052"	"7/74"	"7"	"74"	"1411584.57019043"	"HCD"	"MS2"	"48.80073"	"84.4"	"100.000"	"57.7361"	"18490"	"18490"	"18468"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"175.2"	""	"125.8"	""	"105.4"	""	"133.2"	""	"111.6"	"150.5"	""	"678"	"39"	"35.000"	"28.000"	"0.00414190084795891"	"25"	"0"	"0.0009921"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGTEEISPR"	"[R].lGTEEISPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"615.84772"	"1230.68816"	"1230.68913"	"-0.79"	"-0.00049"	"6/72"	"6"	"72"	"5366513.60272217"	"HCD"	"MS2"	"0.494792"	"223.4"	"100.000"	"48.6785"	"14800"	"14800"	"14783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"299.7"	""	"306.5"	""	"299.3"	""	"302.2"	""	"415.4"	"496.1"	""	"781"	"34"	"35.000"	"28.000"	"0.0159448720362916"	"28"	"0"	"0.002108"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDILDQER"	"[K].lDILDQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"615.84784"	"1230.68840"	"1230.68913"	"-0.59"	"-0.00037"	"6/70"	"6"	"70"	"882874.379760742"	"HCD"	"MS2"	"3.27415"	"40.3"	"100.000"	"79.4626"	"27268"	"27268"	"27249"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.7"	""	"34.4"	""	"42.7"	""	"59.9"	""	"86.1"	"108.3"	""	"781"	"37"	"35.000"	"28.000"	"0.00806530950844012"	""	"0"	"0.00374"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDILDQER"	"[K].lDILDQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"615.84796"	"1230.68865"	"1230.68913"	"-0.40"	"-0.00024"	"6/70"	"6"	"70"	"839039.222167969"	"HCD"	"MS2"	"4.397226"	"39.8"	"100.000"	"79.4902"	"27274"	"27274"	"27258"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.7"	""	"32.3"	""	"45.9"	""	"59.4"	""	"87.6"	"106.2"	""	"751"	"37"	"35.000"	"28.000"	"0.00832932755634982"	"28"	"0"	"0.002319"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGTEEISPR"	"[R].lGTEEISPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"615.84802"	"1230.68877"	"1230.68913"	"-0.30"	"-0.00018"	"7/72"	"7"	"72"	"6678831.34039307"	"HCD"	"MS2"	"0"	"283.1"	"100.000"	"48.7326"	"14809"	"14809"	"14796"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"360.2"	""	"407.2"	""	"379.2"	""	"379.9"	""	"530.8"	"636.1"	""	"751"	"35"	"35.000"	"28.000"	"0.010656385951798"	"24"	"0"	"0.001865"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGTEEISPR"	"[R].lGTEEISPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"615.84808"	"1230.68889"	"1230.68913"	"-0.20"	"-0.00012"	"7/72"	"7"	"72"	"7366930.2064209"	"HCD"	"MS2"	"3.996052"	"304.3"	"100.000"	"48.3790"	"14677"	"14677"	"14658"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"399.4"	""	"411.6"	""	"429.6"	""	"419.1"	"2.1"	"565.6"	"658.4"	""	"751"	"33"	"35.000"	"28.000"	"0.0171241861939712"	"26"	"0"	"0.001953"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGTEEISPR"	"[R].lGTEEISPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"615.84814"	"1230.68901"	"1230.68913"	"-0.10"	"-0.00006"	"6/72"	"6"	"72"	"5098586.96020508"	"HCD"	"MS2"	"0"	"206.2"	"100.000"	"49.0456"	"14936"	"14936"	"14918"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"260.7"	""	"280.1"	""	"270.1"	""	"269.6"	""	"409.1"	"470.2"	""	"751"	"34"	"35.000"	"28.000"	"0.0154742618421047"	"28"	"0"	"0.001734"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDILDQER"	"[K].lDILDQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"615.84827"	"1230.68926"	"1230.68913"	"0.10"	"0.00006"	"6/70"	"6"	"70"	"534654.698364258"	"HCD"	"MS2"	"0"	"28.9"	"100.000"	"79.1932"	"27155"	"27155"	"27136"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.9"	""	"29.6"	""	"34.6"	""	"43.5"	""	"54.1"	"76.6"	""	"751"	"34"	"35.000"	"28.000"	"0.0134775186459199"	"26"	"0"	"0.001995"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDILDQER"	"[K].lDILDQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"615.84827"	"1230.68926"	"1230.68913"	"0.10"	"0.00006"	"7/70"	"7"	"70"	"476280.144348145"	"HCD"	"MS2"	"14.94606"	"24.8"	"100.000"	"79.1518"	"27142"	"27142"	"27125"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.7"	""	"25.0"	""	"30.5"	""	"36.4"	"2.3"	"46.3"	"59.0"	""	"751"	"30"	"35.000"	"28.000"	"0.0344833889979585"	"25"	"0"	"0.002016"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QALNEISAR"	"[R].qALNEISAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08850"	"Syntaxin-4 OS=Rattus norvegicus OX=10116 GN=Stx4 PE=1 SV=1"	"Q08850"	"Syntaxin-4 OS=Rattus norvegicus OX=10116 GN=Stx4 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"615.85315"	"1230.69902"	"1230.70037"	"-1.09"	"-0.00067"	"5/84"	"5"	"84"	"1165443.05303955"	"HCD"	"MS2"	"12.78507"	"81.3"	"100.000"	"43.1743"	"12553"	"12553"	"12524"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"107.5"	""	"90.6"	""	"92.0"	""	"139.2"	""	"167.9"	"175.4"	""	"711"	"30"	"35.000"	"28.000"	"0.0319771390233927"	""	"0"	"0.001199"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLNTNIDGR"	"[R].vLNTNIDGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"615.85345"	"1230.69963"	"1230.70037"	"-0.60"	"-0.00037"	"7/82"	"7"	"82"	"4102945.92523193"	"HCD"	"MS2"	"12.40384"	"178.0"	"100.000"	"50.5872"	"15576"	"15576"	"15558"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"251.5"	""	"209.8"	""	"261.4"	""	"345.0"	""	"336.5"	"282.0"	""	"717"	"44"	"35.000"	"28.000"	"0.00151178196479147"	""	"0"	"0.001328"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLNTNIDGR"	"[R].vLNTNIDGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.5581"	"0.0000"	"1"	"1"	"1"	"615.85364"	"1230.70000"	"1230.70037"	"-0.30"	"-0.00018"	"7/82"	"7"	"82"	"3538477.45318604"	"HCD"	"MS2"	"19.50717"	"154.3"	"100.000"	"50.9537"	"15715"	"15715"	"15698"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"214.8"	""	"202.0"	""	"194.1"	""	"312.3"	""	"289.8"	"250.6"	""	"691"	"43"	"35.000"	"28.000"	"0.00163850605907415"	""	"0"	"0.001887"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTDSTFR"	"[R].eFTDSTFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"616.31085"	"1231.61443"	"1231.61563"	"-0.98"	"-0.00060"	"6/66"	"6"	"66"	"1862348.77935791"	"HCD"	"MS2"	"11.63389"	"101.2"	"100.000"	"55.0323"	"17387"	"17387"	"17368"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"159.4"	""	"123.6"	""	"102.9"	""	"176.3"	"2.5"	"205.8"	"189.8"	""	"448"	"27"	"33.000"	"26.000"	"0.0401095711303906"	"26"	"0.000936"	"0.01189"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTDSTFR"	"[R].eFTDSTFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"616.31091"	"1231.61455"	"1231.61563"	"-0.88"	"-0.00054"	"6/66"	"6"	"66"	"1742074.93505859"	"HCD"	"MS2"	"18.20614"	"97.7"	"100.000"	"55.2692"	"17470"	"17470"	"17447"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"158.6"	""	"130.7"	""	"103.1"	""	"174.3"	"1.1"	"192.6"	"165.5"	""	"452"	"26"	"33.000"	"26.000"	"0.0568994985673502"	"22"	"0.0008629"	"0.009858"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTDSTFR"	"[R].eFTDSTFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"616.31104"	"1231.61479"	"1231.61563"	"-0.68"	"-0.00042"	"6/66"	"6"	"66"	"16263997.5339355"	"HCD"	"MS2"	"0"	"752.0"	"100.000"	"54.7404"	"17269"	"17269"	"17255"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1209.9"	""	"1017.8"	""	"751.0"	""	"1417.4"	"1.7"	"1436.8"	"1290.3"	""	"444"	"34"	"33.000"	"26.000"	"0.00821018559112191"	"18"	"0.000936"	"0.01331"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSFDEVR"	"[K].sYSFDEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"616.31116"	"1231.61504"	"1231.61563"	"-0.48"	"-0.00030"	"5/66"	"5"	"66"	"1529905.52313232"	"HCD"	"MS2"	"42.2846"	"85.5"	"100.000"	"54.3856"	"17112"	"17112"	"17088"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"118.8"	""	"106.8"	""	"108.8"	""	"133.5"	""	"171.8"	"177.7"	""	"444"	"30"	"33.000"	"26.000"	"0.019877097795201"	""	"0"	"0.003384"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTDSTFR"	"[R].eFTDSTFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"1"	"616.31122"	"1231.61516"	"1231.61563"	"-0.38"	"-0.00024"	"6/66"	"6"	"66"	"3762669.1394043"	"HCD"	"MS2"	"4.033882"	"191.3"	"100.000"	"54.4374"	"17146"	"17146"	"17129"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"297.7"	""	"241.0"	""	"211.6"	""	"344.6"	""	"381.2"	"339.5"	""	"446"	"23"	"33.000"	"26.000"	"0.113058927945259"	""	"0.000936"	"0.01252"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTDSTFR"	"[R].eFTDSTFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"616.31128"	"1231.61528"	"1231.61563"	"-0.29"	"-0.00018"	"6/66"	"6"	"66"	"4165322.36999512"	"HCD"	"MS2"	"1.253155"	"211.3"	"100.000"	"54.6826"	"17233"	"17233"	"17216"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"333.0"	""	"275.6"	""	"228.5"	""	"409.6"	"3.7"	"392.4"	"358.9"	""	"446"	"25"	"33.000"	"26.000"	"0.0634314826960885"	"26"	"0.001211"	"0.01539"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTDSTFR"	"[R].eFTDSTFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"616.31128"	"1231.61528"	"1231.61563"	"-0.29"	"-0.00018"	"6/66"	"6"	"66"	"18446451.0465088"	"HCD"	"MS2"	"0"	"588.0"	"68.663"	"54.9641"	"17347"	"17347"	"17337"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"955.2"	""	"826.1"	""	"572.7"	""	"1112.5"	"2.1"	"1103.9"	"997.2"	""	"446"	"36"	"33.000"	"26.000"	"0.00566636913337494"	"18"	"0.0006732"	"0.009208"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANWEAQQR"	"[K].aNWEAQQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"616.32135"	"1231.63542"	"1231.63810"	"-2.17"	"-0.00134"	"6/68"	"6"	"68"	"2563300.89117432"	"HCD"	"MS2"	"40.85924"	"155.5"	"100.000"	"31.2863"	"7736"	"7736"	"7710"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"250.2"	""	"175.1"	""	"171.7"	""	"267.8"	""	"304.9"	"306.8"	""	"552"	"24"	"34.000"	"27.000"	"0.112436956673935"	"20"	"0.000936"	"0.01342"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANWEAQQR"	"[K].aNWEAQQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"616.32166"	"1231.63603"	"1231.63810"	"-1.68"	"-0.00103"	"5/68"	"5"	"68"	"760873.23449707"	"HCD"	"MS2"	"20.97324"	"60.6"	"100.000"	"31.6294"	"7867"	"7867"	"7837"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"84.3"	""	"68.4"	""	"84.6"	""	"100.9"	"5.4"	"111.7"	"119.2"	""	"559"	"14"	"34.000"	"27.000"	"1.06753423699793"	"19"	"0.008437"	"0.1003"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANWEAQQR"	"[K].aNWEAQQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"616.32220"	"1231.63713"	"1231.63810"	"-0.79"	"-0.00048"	"6/68"	"6"	"68"	"2483619.37127686"	"HCD"	"MS2"	"32.34143"	"142.1"	"100.000"	"31.3120"	"7737"	"7737"	"7711"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"238.3"	""	"156.7"	""	"170.5"	""	"258.6"	"0.8"	"266.4"	"254.2"	""	"553"	"25"	"34.000"	"27.000"	"0.0874369773036556"	"24"	"0.0008629"	"0.01065"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANWEAQQR"	"[K].aNWEAQQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"616.32227"	"1231.63725"	"1231.63810"	"-0.69"	"-0.00042"	"6/68"	"6"	"68"	"857188.35144043"	"HCD"	"MS2"	"0"	"62.1"	"100.000"	"31.5943"	"7862"	"7862"	"7836"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.4"	""	"68.9"	""	"75.9"	""	"103.0"	"3.5"	"120.8"	"136.4"	""	"553"	"12"	"34.000"	"27.000"	"1.60212034562033"	"18"	"0.006958"	"0.08121"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVEAHYR"	"[R].dIVEAHYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P09606"	"Glutamine synthetase OS=Rattus norvegicus OX=10116 GN=Glul PE=1 SV=3"	"P09606"	"Glutamine synthetase OS=Rattus norvegicus OX=10116 GN=Glul PE=1 SV=3"	"0"	"3"	"3"	"0.6400"	"0.0000"	"1"	"1"	"1"	"411.22559"	"1231.66220"	"1231.66325"	"-0.85"	"-0.00035"	"7/62"	"7"	"62"	"4983790.96618652"	"HCD"	"MS2"	"9.124437"	"97.9"	"100.000"	"34.5446"	"9049"	"9049"	"9028"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"153.1"	""	"134.9"	""	"126.8"	""	"163.6"	""	"180.5"	"174.9"	""	"764"	"50"	"35.000"	"28.000"	"0.000384647897501389"	""	"0"	"0.003664"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVEAHYR"	"[R].dIVEAHYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P09606"	"Glutamine synthetase OS=Rattus norvegicus OX=10116 GN=Glul PE=1 SV=3"	"P09606"	"Glutamine synthetase OS=Rattus norvegicus OX=10116 GN=Glul PE=1 SV=3"	"0"	"3"	"3"	"0.6458"	"0.0000"	"1"	"1"	"1"	"411.22559"	"1231.66220"	"1231.66325"	"-0.85"	"-0.00035"	"7/62"	"7"	"62"	"5738347.36169434"	"HCD"	"MS2"	"10.68367"	"110.7"	"100.000"	"34.4536"	"9018"	"9018"	"8999"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"175.7"	""	"153.6"	""	"152.2"	""	"174.1"	""	"205.6"	"188.8"	""	"764"	"48"	"35.000"	"28.000"	"0.000576850618890705"	""	"0"	"0.003689"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQLQLDER"	"[K].tQLQLDER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P32089"	"Tricarboxylate transport protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a1 PE=1 SV=1"	"P32089"	"Tricarboxylate transport protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a1 PE=1 SV=1"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"616.34369"	"1231.68010"	"1231.68438"	"-3.47"	"-0.00214"	"6/80"	"6"	"80"	"2578693.31524658"	"HCD"	"MS2"	"38.71437"	"147.4"	"100.000"	"43.1946"	"12572"	"12572"	"12546"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"186.9"	""	"179.8"	""	"192.7"	""	"245.5"	""	"282.9"	"311.7"	""	"787"	"34"	"35.000"	"28.000"	"0.0142871214552035"	""	"0.0006732"	"0.008893"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQLQLDER"	"[K].tQLQLDER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P32089"	"Tricarboxylate transport protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a1 PE=1 SV=1"	"P32089"	"Tricarboxylate transport protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a1 PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"616.34442"	"1231.68157"	"1231.68438"	"-2.29"	"-0.00141"	"7/80"	"7"	"80"	"1704627.85803223"	"HCD"	"MS2"	"54.54478"	"97.9"	"100.000"	"43.2779"	"12595"	"12595"	"12572"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"119.6"	""	"101.7"	""	"120.1"	""	"176.1"	""	"207.9"	"212.8"	""	"783"	"11"	"35.000"	"28.000"	"3.05303488269856"	"18"	"0.003717"	"0.03869"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADVDAATLAR"	"[R].aDVDAATLAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"616.34521"	"1231.68315"	"1231.68438"	"-1.00"	"-0.00061"	"8/82"	"8"	"82"	"3814852.01470947"	"HCD"	"MS2"	"29.49225"	"167.4"	"100.000"	"48.0660"	"14549"	"14549"	"14534"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"233.3"	""	"307.1"	""	"282.2"	""	"180.6"	""	"285.5"	"296.0"	""	"788"	"52"	"35.000"	"28.000"	"0.000266376692304441"	""	"0"	"6.771E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVIPETSSR"	"[R].nVIPETSSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"0"	"2"	"2"	"0.4074"	"0.0000"	"1"	"1"	"1"	"616.34534"	"1231.68340"	"1231.68438"	"-0.80"	"-0.00049"	"6/86"	"6"	"86"	"2126970.46380615"	"HCD"	"MS2"	"0"	"108.4"	"100.000"	"36.4197"	"9816"	"9816"	"9795"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"116.0"	""	"103.5"	""	"124.2"	""	"202.9"	"8.2"	"229.9"	"246.0"	""	"793"	"27"	"35.000"	"28.000"	"0.0750314244792733"	""	"0.003922"	"0.03979"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALADTENLR"	"[R].aLADTENLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P97576"	"GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Grpel1 PE=1 SV=2"	"P97576"	"GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Grpel1 PE=1 SV=2"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"616.34546"	"1231.68364"	"1231.68438"	"-0.60"	"-0.00037"	"7/72"	"7"	"72"	"1025562.45275879"	"HCD"	"MS2"	"42.92543"	"74.4"	"100.000"	"46.2854"	"13813"	"13813"	"13789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"101.1"	""	"73.4"	""	"101.1"	""	"132.4"	"1.3"	"150.9"	"145.6"	""	"793"	"15"	"35.000"	"28.000"	"1.32203572660623"	"24"	"0.001211"	"0.01547"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALADTENLR"	"[R].aLADTENLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P97576"	"GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Grpel1 PE=1 SV=2"	"P97576"	"GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Grpel1 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"616.34552"	"1231.68376"	"1231.68438"	"-0.50"	"-0.00031"	"7/72"	"7"	"72"	"2011152.92871094"	"HCD"	"MS2"	"30.69396"	"121.6"	"100.000"	"45.8987"	"13667"	"13667"	"13642"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"165.5"	""	"141.3"	""	"158.2"	""	"209.4"	""	"230.7"	"251.5"	""	"793"	"42"	"35.000"	"28.000"	"0.0024731086226878"	"22"	"0"	"0.0004073"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INAAEIESR"	"[R].iNAAEIESR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"616.34558"	"1231.68389"	"1231.68438"	"-0.40"	"-0.00025"	"7/84"	"7"	"84"	"1805798.92138672"	"HCD"	"MS2"	"13.55603"	"98.9"	"100.000"	"49.7107"	"15208"	"15208"	"15185"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"143.0"	""	"122.5"	""	"126.8"	""	"157.3"	""	"188.0"	"201.2"	""	"764"	"36"	"35.000"	"28.000"	"0.00893435825167874"	"26"	"0"	"0.0009332"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADVDAATLAR"	"[R].aDVDAATLAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"0.7544"	"0.0000"	"1"	"1"	"1"	"616.34564"	"1231.68401"	"1231.68438"	"-0.30"	"-0.00019"	"8/82"	"8"	"82"	"3595317.18145752"	"HCD"	"MS2"	"30.84916"	"179.9"	"100.000"	"48.4011"	"14673"	"14673"	"14656"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"263.1"	""	"321.6"	""	"303.0"	""	"194.8"	""	"305.1"	"317.3"	""	"764"	"57"	"35.000"	"28.000"	"7.04795890126558E-05"	""	"0"	"4.809E-05"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INAAEIESR"	"[R].iNAAEIESR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"616.34595"	"1231.68462"	"1231.68438"	"0.19"	"0.00012"	"7/84"	"7"	"84"	"1995350.24688721"	"HCD"	"MS2"	"13.17834"	"106.2"	"100.000"	"49.3371"	"15067"	"15067"	"15047"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"144.4"	""	"135.5"	""	"127.5"	""	"169.0"	"3.2"	"209.4"	"218.6"	""	"762"	"35"	"35.000"	"28.000"	"0.0118011675300152"	"25"	"0"	"0.0006024"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALADTENLR"	"[R].aLADTENLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P97576"	"GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Grpel1 PE=1 SV=2"	"P97576"	"GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Grpel1 PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"616.34674"	"1231.68620"	"1231.68438"	"1.48"	"0.00091"	"7/72"	"7"	"72"	"1166928.84301758"	"HCD"	"MS2"	"43.7066"	"87.3"	"100.000"	"45.9792"	"13688"	"13688"	"13661"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"106.9"	""	"90.9"	""	"101.7"	""	"168.2"	""	"176.5"	"187.2"	""	"861"	"34"	"36.000"	"29.000"	"0.0162170985462573"	"22"	"0"	"0.001372"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVELPLR"	"[K].emVELPLR.[H]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"616.34894"	"1231.69060"	"1231.69178"	"-0.95"	"-0.00059"	"7/62"	"7"	"62"	"3195784.3036499"	"HCD"	"MS2"	"32.52719"	"153.0"	"100.000"	"65.9754"	"21787"	"21787"	"21769"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"218.4"	""	"218.9"	""	"219.0"	""	"274.6"	""	"272.3"	"253.6"	""	"852"	"27"	"36.000"	"29.000"	"0.0942778346292002"	"23"	"0.003717"	"0.03831"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVELPLR"	"[K].emVELPLR.[H]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"616.34900"	"1231.69072"	"1231.69178"	"-0.86"	"-0.00053"	"7/62"	"7"	"62"	"3773940.9855957"	"HCD"	"MS2"	"27.43109"	"177.6"	"100.000"	"65.8516"	"21752"	"21752"	"21733"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"245.1"	""	"253.6"	""	"242.0"	""	"343.2"	""	"332.6"	"268.2"	""	"852"	"25"	"36.000"	"29.000"	"0.148733774393878"	"22"	"0.00379"	"0.03905"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVELPLR"	"[K].emVELPLR.[H]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"616.34961"	"1231.69194"	"1231.69178"	"0.14"	"0.00008"	"7/62"	"7"	"62"	"1902443.14465332"	"HCD"	"MS2"	"30.99573"	"86.9"	"100.000"	"65.5450"	"21627"	"21627"	"21609"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"118.9"	""	"119.6"	""	"118.3"	""	"173.7"	""	"159.6"	"137.2"	""	"829"	"25"	"36.000"	"29.000"	"0.132594202296708"	"23"	"0.007686"	"0.09415"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDPDGK"	"[R].lEDPDGk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZTX0"	"Transmembrane emp24 domain-containing protein 7 OS=Rattus norvegicus OX=10116 GN=Tmed7 PE=1 SV=1"	"D3ZTX0"	"Transmembrane emp24 domain-containing protein 7 OS=Rattus norvegicus OX=10116 GN=Tmed7 PE=1 SV=1"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"1"	"616.34961"	"1231.69194"	"1231.69344"	"-1.21"	"-0.00075"	"6/54"	"6"	"54"	"3216316.06140137"	"HCD"	"MS2"	"20.65799"	"225.9"	"100.000"	"44.7597"	"13202"	"13202"	"13185"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"310.8"	""	"225.2"	""	"214.1"	""	"404.3"	""	"491.3"	"502.6"	""	"829"	"18"	"36.000"	"29.000"	"0.694263822112958"	"29"	"0.007935"	"0.09744"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGASTQAAQR"	"[K].iGASTQAAQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"616.35034"	"1231.69341"	"1231.69561"	"-1.79"	"-0.00110"	"8/82"	"8"	"82"	"3000433.39678955"	"HCD"	"MS2"	"28.52273"	"139.5"	"100.000"	"26.1886"	"5656"	"5656"	"5640"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"203.1"	""	"182.4"	""	"202.4"	""	"246.4"	""	"225.0"	"264.0"	""	"803"	"44"	"36.000"	"29.000"	"0.00155842371945245"	"20"	"0"	"7.176E-05"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVELPLR"	"[K].emVELPLR.[H]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"616.35040"	"1231.69353"	"1231.69178"	"1.42"	"0.00088"	"7/62"	"7"	"62"	"2186210.65551758"	"HCD"	"MS2"	"19.56718"	"97.1"	"100.000"	"65.6759"	"21665"	"21665"	"21644"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"128.3"	""	"131.5"	""	"131.7"	""	"196.7"	""	"182.0"	"155.1"	""	"804"	"25"	"36.000"	"29.000"	"0.142306931115541"	"22"	"0.003449"	"0.03452"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGASTQAAQR"	"[K].iGASTQAAQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"616.35083"	"1231.69438"	"1231.69561"	"-1.00"	"-0.00062"	"8/82"	"8"	"82"	"14198841.7597656"	"HCD"	"MS2"	"0"	"219.1"	"52.177"	"26.3950"	"5755"	"5755"	"5741"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"294.1"	""	"245.3"	""	"285.0"	""	"390.1"	""	"404.7"	"459.5"	""	"800"	"49"	"36.000"	"29.000"	"0.00054583325463557"	"25"	"0"	"0.0001567"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGASTQAAQR"	"[K].iGASTQAAQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"616.35089"	"1231.69451"	"1231.69561"	"-0.90"	"-0.00055"	"8/82"	"8"	"82"	"3985597.04229736"	"HCD"	"MS2"	"35.98366"	"172.3"	"100.000"	"26.1126"	"5641"	"5641"	"5622"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"254.3"	""	"233.6"	""	"251.3"	""	"298.3"	""	"290.1"	"306.1"	""	"809"	"42"	"36.000"	"29.000"	"0.00248266731089159"	"21"	"0"	"0.0001321"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGASTQAAQR"	"[K].iGASTQAAQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"616.35114"	"1231.69499"	"1231.69561"	"-0.50"	"-0.00031"	"8/82"	"8"	"82"	"10574934.6893311"	"HCD"	"MS2"	"0"	"249.4"	"57.719"	"26.4985"	"5780"	"5780"	"5763"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"356.3"	""	"301.1"	""	"377.5"	""	"418.6"	""	"426.4"	"484.8"	""	"809"	"42"	"36.000"	"29.000"	"0.00249987633855989"	"21"	"0"	"0.0002475"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIAEAK"	"[R].eLIAEAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"616.38635"	"1231.76543"	"1231.76621"	"-0.63"	"-0.00039"	"6/56"	"6"	"56"	"853569.620422363"	"HCD"	"MS2"	"41.09183"	"59.8"	"100.000"	"57.0932"	"18214"	"18214"	"18192"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.7"	""	"73.2"	""	"78.7"	""	"101.9"	""	"126.7"	"115.7"	""	"563"	"18"	"34.000"	"27.000"	"0.425087563397207"	"23"	"0.003449"	"0.03311"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIAEAK"	"[R].eLIAEAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"616.38641"	"1231.76555"	"1231.76621"	"-0.54"	"-0.00033"	"5/56"	"5"	"56"	"875896.886535645"	"HCD"	"MS2"	"36.0293"	"58.6"	"100.000"	"56.9139"	"18155"	"18155"	"18131"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"73.8"	""	"68.6"	""	"72.7"	""	"108.6"	""	"119.9"	"116.5"	""	"556"	"20"	"34.000"	"27.000"	"0.267944468567463"	"23"	"0.004022"	"0.04348"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNPVFGVMS"	"[R].hNPVFGVmS.[-]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"616.81726"	"1232.62724"	"1232.62951"	"-1.84"	"-0.00113"	"7/64"	"7"	"64"	"1690131.35723877"	"HCD"	"MS2"	"29.41299"	"72.2"	"100.000"	"46.7325"	"14005"	"14005"	"13983"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"99.6"	""	"68.3"	""	"79.4"	""	"146.0"	"2.5"	"136.7"	"152.3"	""	"546"	"32"	"34.000"	"27.000"	"0.0181201858219721"	"17"	"0.001211"	"0.01443"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNPVFGVMS"	"[R].hNPVFGVmS.[-]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"616.81799"	"1232.62871"	"1232.62951"	"-0.65"	"-0.00040"	"7/64"	"7"	"64"	"1602445.82489014"	"HCD"	"MS2"	"47.1354"	"61.1"	"100.000"	"47.2749"	"14215"	"14215"	"14193"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"72.1"	""	"64.4"	""	"67.5"	""	"117.0"	""	"133.3"	"127.1"	""	"570"	"31"	"34.000"	"27.000"	"0.022638354689642"	"14"	"0.0003538"	"0.007162"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNPVFGVMS"	"[R].hNPVFGVmS.[-]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"616.81799"	"1232.62871"	"1232.62951"	"-0.65"	"-0.00040"	"7/64"	"7"	"64"	"1827628.04187012"	"HCD"	"MS2"	"40.38629"	"67.2"	"100.000"	"47.0547"	"14137"	"14137"	"14110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"88.7"	""	"62.8"	""	"73.4"	""	"141.0"	"4.5"	"138.6"	"129.2"	""	"570"	"34"	"34.000"	"27.000"	"0.0115569932602789"	"15"	"0.0008629"	"0.01114"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNPVFGVMS"	"[R].hNPVFGVmS.[-]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"616.81805"	"1232.62883"	"1232.62951"	"-0.55"	"-0.00034"	"7/64"	"7"	"64"	"1531700.4331665"	"HCD"	"MS2"	"29.17083"	"65.0"	"100.000"	"46.9667"	"14089"	"14089"	"14067"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"74.0"	""	"78.3"	""	"82.5"	""	"133.4"	"1.0"	"126.8"	"120.8"	""	"573"	"41"	"34.000"	"27.000"	"0.00215339959136216"	"17"	"0.0001301"	"0.004057"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVDDVWR"	"[R].dVVDDVWR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ79"	"Cytoplasmic dynein 2 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync2h1 PE=1 SV=1"	"Q9JJ79"	"Cytoplasmic dynein 2 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync2h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"616.82684"	"1232.64641"	"1232.64727"	"-0.70"	"-0.00043"	"6/64"	"6"	"64"	"420406.143798828"	"HCD"	"MS2"	"25.11843"	"25.9"	"100.000"	"75.8388"	"25798"	"25798"	"25778"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.9"	""	"30.2"	""	"37.6"	""	"42.7"	"1.2"	"43.5"	"44.6"	""	"770"	"16"	"35.000"	"28.000"	"0.960418969873036"	"20"	"0.0023"	"0.02415"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVDDVWR"	"[R].dVVDDVWR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ79"	"Cytoplasmic dynein 2 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync2h1 PE=1 SV=1"	"Q9JJ79"	"Cytoplasmic dynein 2 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync2h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"616.82709"	"1232.64690"	"1232.64727"	"-0.30"	"-0.00018"	"12/64"	"12"	"64"	"373195.829467773"	"HCD"	"MS2"	"39.76121"	"22.5"	"100.000"	"75.6718"	"25740"	"25740"	"25719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.3"	""	"32.7"	""	"34.7"	""	"37.1"	""	"37.4"	"31.5"	""	"763"	"16"	"35.000"	"28.000"	"0.936471451333838"	"18"	"0.001374"	"0.01745"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEPATDLTR"	"[K].tEPATDLTR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P48450"	"Lanosterol synthase OS=Rattus norvegicus OX=10116 GN=Lss PE=1 SV=2"	"P48450"	"Lanosterol synthase OS=Rattus norvegicus OX=10116 GN=Lss PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"616.83771"	"1232.66814"	"1232.66840"	"-0.21"	"-0.00013"	"6/78"	"6"	"78"	"700827.417541504"	"HCD"	"MS2"	"52.24586"	"51.0"	"100.000"	"35.1607"	"9300"	"9300"	"9271"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"72.2"	""	"57.9"	""	"79.9"	""	"74.0"	"4.2"	"97.7"	"97.7"	""	"819"	"22"	"36.000"	"29.000"	"0.233482269498966"	"19"	"0.006739"	"0.07618"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGNDAIMAR"	"[R].rGNDAIMAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"411.56107"	"1232.66864"	"1232.67311"	"-3.62"	"-0.00149"	"7/80"	"7"	"80"	"4239202.39593506"	"HCD"	"MS2"	"39.33415"	"274.6"	"100.000"	"22.5251"	"4194"	"4194"	"4170"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"381.7"	""	"354.6"	""	"390.0"	""	"403.8"	"7.4"	"542.2"	"524.2"	""	"822"	"22"	"36.000"	"29.000"	"0.283036093797497"	"14"	"0.007213"	"0.08264"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGNDAIMAR"	"[R].rGNDAIMAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"1"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"411.56165"	"1232.67038"	"1232.67311"	"-2.21"	"-0.00091"	"7/80"	"7"	"80"	"4539552.2255249"	"HCD"	"MS2"	"34.19271"	"284.7"	"100.000"	"22.5415"	"4184"	"4184"	"4158"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"373.4"	""	"395.4"	""	"383.9"	""	"448.0"	""	"558.0"	"541.2"	""	"903"	"24"	"36.000"	"29.000"	"0.20167764185616"	"17"	"0.007602"	"0.09006"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGNDAIMAR"	"[R].rGNDAIMAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"1"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"616.83936"	"1232.67143"	"1232.67311"	"-1.36"	"-0.00084"	"7/80"	"7"	"80"	"1047746.36322021"	"HCD"	"MS2"	"0"	"52.0"	"100.000"	"22.4976"	"4183"	"4183"	"4154"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"92.4"	""	"61.5"	""	"79.1"	""	"80.7"	"6.3"	"80.1"	"91.8"	""	"908"	"24"	"36.000"	"29.000"	"0.189694986457566"	"19"	"0.003507"	"0.03701"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGNDAIMAR"	"[R].rGNDAIMAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"1"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"616.83954"	"1232.67180"	"1232.67311"	"-1.06"	"-0.00065"	"8/80"	"8"	"80"	"1316886.05834961"	"HCD"	"MS2"	"0"	"49.9"	"100.000"	"22.4679"	"4154"	"4154"	"4133"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.2"	""	"69.8"	""	"67.3"	""	"75.6"	"3.7"	"85.7"	"87.0"	""	"908"	"32"	"36.000"	"29.000"	"0.0309781767140318"	"20"	"0.0001301"	"0.004852"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSLEAELR"	"[R].vSSLEAELR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U4E6"	"Golgin subfamily A member 4 OS=Rattus norvegicus OX=10116 GN=Golga4 PE=1 SV=2"	"Q5U4E6"	"Golgin subfamily A member 4 OS=Rattus norvegicus OX=10116 GN=Golga4 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"616.85577"	"1232.70427"	"1232.70478"	"-0.41"	"-0.00026"	"7/74"	"7"	"74"	"525244.128112793"	"HCD"	"MS2"	"23.72001"	"28.0"	"100.000"	"72.3195"	"24388"	"24388"	"24357"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.6"	""	"31.1"	""	"37.7"	""	"50.3"	""	"51.6"	"60.5"	""	"828"	"20"	"36.000"	"29.000"	"0.453941973203278"	"18"	"0.001374"	"0.01673"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEVTELRR"	"[K].tEVTELRR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"0.2121"	"0.0000"	"1"	"1"	"1"	"411.57626"	"1232.71424"	"1232.71602"	"-1.44"	"-0.00059"	"6/66"	"6"	"66"	"13976092.3258057"	"HCD"	"MS2"	"19.14904"	"401.4"	"77.593"	"28.4785"	"6600"	"6600"	"6582"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"922.7"	""	"727.6"	""	"754.4"	""	"484.5"	""	"374.6"	"511.4"	""	"815"	"33"	"36.000"	"29.000"	"0.0204233797703114"	""	"0.0004639"	"0.007694"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEVTELRR"	"[K].tEVTELRR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"0.2258"	"0.0000"	"1"	"1"	"1"	"411.57629"	"1232.71433"	"1232.71602"	"-1.37"	"-0.00056"	"6/66"	"6"	"66"	"13877812.7537231"	"HCD"	"MS2"	"17.71567"	"436.2"	"83.460"	"28.5592"	"6619"	"6619"	"6601"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"977.5"	""	"775.4"	""	"839.9"	""	"535.7"	""	"409.2"	"564.8"	""	"815"	"31"	"36.000"	"29.000"	"0.0326683810830479"	""	"0.001465"	"0.01844"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEITELRR"	"[K].sEITELRR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"1"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"411.57635"	"1232.71451"	"1232.71602"	"-1.22"	"-0.00050"	"5/66"	"5"	"66"	"4012629.21691895"	"HCD"	"MS2"	"56.12159"	"164.9"	"100.000"	"32.4994"	"8222"	"8222"	"8200"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"306.0"	""	"219.1"	""	"262.7"	""	"245.7"	""	"243.1"	"283.2"	""	"810"	"25"	"36.000"	"29.000"	"0.135973733768397"	"24"	"0.003507"	"0.03643"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEITELRR"	"[K].sEITELRR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"1"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"411.57669"	"1232.71552"	"1232.71602"	"-0.40"	"-0.00017"	"5/66"	"5"	"66"	"6970681.2265625"	"HCD"	"MS2"	"24.45034"	"261.5"	"100.000"	"32.5474"	"8248"	"8248"	"8227"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"576.1"	""	"344.0"	""	"395.1"	""	"390.8"	""	"331.7"	"429.4"	""	"783"	"25"	"35.000"	"28.000"	"0.113431001458507"	"22"	"0.004867"	"0.05219"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEQAAK"	"[K].vEEQAAk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08650"	"Complement C5 (Fragment) OS=Rattus norvegicus OX=10116 GN=C5 PE=1 SV=2"	"P08650"	"Complement C5 (Fragment) OS=Rattus norvegicus OX=10116 GN=C5 PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"616.86548"	"1232.72368"	"1232.72507"	"-1.13"	"-0.00070"	"6/56"	"6"	"56"	"1800119.49493408"	"HCD"	"MS2"	"0"	"135.6"	"100.000"	"30.9576"	"7604"	"7604"	"7585"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"252.3"	""	"200.9"	""	"142.5"	""	"204.7"	"0.2"	"249.1"	"233.9"	""	"721"	"29"	"35.000"	"28.000"	"0.0481842683714993"	"22"	"0.003967"	"0.0413"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEQAAK"	"[K].vEEQAAk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08650"	"Complement C5 (Fragment) OS=Rattus norvegicus OX=10116 GN=C5 PE=1 SV=2"	"P08650"	"Complement C5 (Fragment) OS=Rattus norvegicus OX=10116 GN=C5 PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"616.86603"	"1232.72478"	"1232.72507"	"-0.24"	"-0.00015"	"6/56"	"6"	"56"	"2224319.61505127"	"HCD"	"MS2"	"18.53397"	"159.1"	"100.000"	"31.0108"	"7614"	"7614"	"7590"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"290.5"	""	"241.3"	""	"154.6"	""	"242.5"	""	"306.9"	"272.2"	""	"717"	"32"	"35.000"	"28.000"	"0.0234687068403118"	"24"	"0.003189"	"0.03202"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAEAEVK"	"[K].qAEAEVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5HZY0"	"UBX domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Ubxn4 PE=1 SV=1"	"Q5HZY0"	"UBX domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Ubxn4 PE=1 SV=1"	"0"	"2"	"2"	"0.1538"	"0.0000"	"1"	"1"	"1"	"616.86609"	"1232.72490"	"1232.72507"	"-0.14"	"-0.00009"	"10/64"	"10"	"64"	"846874.794128418"	"HCD"	"MS2"	"0"	"76.3"	"100.000"	"30.2188"	"7306"	"7306"	"7284"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"101.2"	""	"68.7"	""	"83.9"	""	"145.3"	"0.3"	"167.3"	"158.0"	""	"717"	"26"	"35.000"	"28.000"	"0.0923611134785424"	""	"0.003717"	"0.03814"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAEAEVK"	"[K].qAEAEVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5HZY0"	"UBX domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Ubxn4 PE=1 SV=1"	"Q5HZY0"	"UBX domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Ubxn4 PE=1 SV=1"	"0"	"2"	"2"	"0.1538"	"0.0000"	"1"	"1"	"1"	"616.86615"	"1232.72502"	"1232.72507"	"-0.04"	"-0.00002"	"10/64"	"10"	"64"	"789504.071105957"	"HCD"	"MS2"	"18.53724"	"67.6"	"100.000"	"30.2352"	"7301"	"7301"	"7274"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"85.1"	""	"57.0"	""	"70.9"	""	"142.0"	"0.2"	"144.8"	"142.1"	""	"717"	"26"	"35.000"	"28.000"	"0.0942951075094495"	""	"0.002937"	"0.02777"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALQDEK"	"[K].aALQDEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"616.86627"	"1232.72527"	"1232.72507"	"0.16"	"0.00010"	"6/56"	"6"	"56"	"1770103.87463379"	"HCD"	"MS2"	"0"	"145.1"	"100.000"	"37.4924"	"10250"	"10250"	"10238"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"149.6"	""	"110.1"	""	"143.9"	""	"256.7"	""	"394.1"	"331.1"	""	"718"	"32"	"35.000"	"28.000"	"0.0209456792434274"	""	"0.003449"	"0.0337"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALQDEK"	"[K].aALQDEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.4242"	"0.0000"	"1"	"1"	"1"	"616.86694"	"1232.72661"	"1232.72507"	"1.25"	"0.00077"	"6/56"	"6"	"56"	"1888888.61358643"	"HCD"	"MS2"	"20.53936"	"154.4"	"100.000"	"37.6197"	"10296"	"10296"	"10284"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"128.3"	""	"133.6"	""	"141.8"	""	"286.7"	""	"398.3"	"384.8"	""	"716"	"33"	"35.000"	"28.000"	"0.0174535199457012"	""	"0.0023"	"0.02406"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SANSPDGK"	"[K].sANSPDGk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"617.34509"	"1233.68291"	"1233.68394"	"-0.83"	"-0.00051"	"10/76"	"10"	"76"	"8436759.36108398"	"HCD"	"MS2"	"17.06968"	"568.6"	"100.000"	"23.5098"	"4597"	"4597"	"4572"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"921.2"	""	"652.0"	""	"752.5"	""	"950.4"	""	"1054.5"	"1061.3"	""	"869"	"26"	"36.000"	"29.000"	"0.114285144247854"	"25"	"0.001036"	"0.01363"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SANSPDGK"	"[K].sANSPDGk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"617.34528"	"1233.68328"	"1233.68394"	"-0.54"	"-0.00033"	"10/76"	"10"	"76"	"6610603.91040039"	"HCD"	"MS2"	"22.49459"	"455.5"	"100.000"	"23.5786"	"4608"	"4608"	"4585"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"728.2"	""	"517.5"	""	"615.9"	""	"767.5"	""	"846.3"	"848.3"	""	"842"	"24"	"36.000"	"29.000"	"0.151803608712111"	"21"	"0.000936"	"0.01306"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SANSPDGK"	"[K].sANSPDGk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"617.34552"	"1233.68376"	"1233.68394"	"-0.14"	"-0.00009"	"10/76"	"10"	"76"	"3177962.89245605"	"HCD"	"MS2"	"27.84049"	"151.2"	"100.000"	"23.8909"	"4735"	"4735"	"4711"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"230.2"	""	"172.3"	""	"191.4"	""	"252.8"	""	"307.6"	"281.5"	""	"839"	"18"	"36.000"	"29.000"	"0.619058890709238"	"18"	"0.006958"	"0.08124"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPVDEK"	"[K].tSPVDEk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"3"	"617.35675"	"1233.70622"	"1233.70909"	"-2.32"	"-0.00143"	"6/58"	"6"	"58"	"3971053.53295898"	"HCD"	"MS2"	"0"	"300.9"	"100.000"	"33.6248"	"8685"	"8685"	"8669"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"509.1"	""	"435.6"	""	"361.6"	""	"499.5"	"11.4"	"547.2"	"483.9"	""	"813"	"33"	"36.000"	"29.000"	"0.019322376934575"	"23"	"0.005617"	"0.06341"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVGEEK"	"[K].vDVGEEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"617.35742"	"1233.70757"	"1233.70909"	"-1.23"	"-0.00076"	"6/56"	"6"	"56"	"9151040.63763428"	"HCD"	"MS2"	"3.43826"	"543.2"	"83.373"	"43.7574"	"12790"	"12790"	"12783"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"866.0"	""	"549.8"	""	"757.1"	""	"888.9"	""	"1012.8"	"1078.2"	""	"804"	"34"	"36.000"	"29.000"	"0.0176695729406005"	"28"	"0.005617"	"0.06326"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVGEEK"	"[K].vDVGEEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"617.35748"	"1233.70769"	"1233.70909"	"-1.13"	"-0.00070"	"12/56"	"12"	"56"	"7626875.62786865"	"HCD"	"MS2"	"13.40238"	"496.6"	"100.000"	"43.6694"	"12763"	"12763"	"12754"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"777.2"	""	"491.7"	""	"675.9"	""	"842.8"	""	"912.8"	"1017.1"	""	"794"	"37"	"35.000"	"28.000"	"0.00880623978660688"	"28"	"0.004069"	"0.04399"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVGEEK"	"[K].vDVGEEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"617.35773"	"1233.70818"	"1233.70909"	"-0.74"	"-0.00046"	"6/56"	"6"	"56"	"8255287.07702637"	"HCD"	"MS2"	"0"	"544.9"	"100.000"	"43.3898"	"12651"	"12651"	"12637"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"956.9"	""	"597.1"	""	"733.2"	""	"899.9"	""	"964.1"	"1016.2"	""	"797"	"35"	"36.000"	"29.000"	"0.0114137492100777"	"29"	"0.004867"	"0.05244"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVGEEK"	"[K].vDVGEEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"617.35791"	"1233.70854"	"1233.70909"	"-0.44"	"-0.00027"	"6/56"	"6"	"56"	"7022551.94445801"	"HCD"	"MS2"	"14.14084"	"462.7"	"100.000"	"43.4960"	"12684"	"12684"	"12666"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"845.2"	""	"487.5"	""	"621.9"	""	"768.2"	""	"795.2"	"870.8"	""	"782"	"35"	"35.000"	"28.000"	"0.0110962634012065"	"26"	"0.003967"	"0.04112"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINNAEK"	"[K].sINNAEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"617.36310"	"1233.71892"	"1233.72032"	"-1.14"	"-0.00070"	"6/66"	"6"	"66"	"1416370.28100586"	"HCD"	"MS2"	"0"	"110.6"	"100.000"	"30.7493"	"7509"	"7509"	"7499"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"184.0"	""	"150.4"	""	"182.8"	""	"177.5"	""	"178.0"	"178.8"	""	"689"	"34"	"35.000"	"28.000"	"0.0142951667687538"	""	"0.003449"	"0.03318"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINNAEK"	"[K].sINNAEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"2"	"2"	"0.4062"	"0.0000"	"1"	"1"	"1"	"617.36322"	"1233.71916"	"1233.72032"	"-0.94"	"-0.00058"	"6/66"	"6"	"66"	"1757795.23693848"	"HCD"	"MS2"	"0"	"142.7"	"100.000"	"30.6871"	"7496"	"7496"	"7478"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"229.1"	""	"212.4"	""	"221.8"	""	"225.2"	""	"240.0"	"221.8"	""	"734"	"32"	"35.000"	"28.000"	"0.0217103119742399"	""	"0.003581"	"0.03743"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINNAEK"	"[K].sINNAEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"1"	"617.36365"	"1233.72002"	"1233.72032"	"-0.25"	"-0.00015"	"6/66"	"6"	"66"	"3361183.04217529"	"HCD"	"MS2"	"6.552636"	"261.2"	"100.000"	"30.4647"	"7394"	"7394"	"7372"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"447.6"	""	"375.8"	""	"376.9"	""	"438.9"	""	"443.8"	"388.7"	""	"707"	"34"	"35.000"	"28.000"	"0.0147703034609581"	""	"0.003922"	"0.03962"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SINNAEK"	"[K].sINNAEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"2"	"2"	"0.0435"	"0.0000"	"1"	"1"	"1"	"617.36456"	"1233.72185"	"1233.72032"	"1.24"	"0.00076"	"12/66"	"12"	"66"	"2043783.65490723"	"HCD"	"MS2"	"0"	"168.0"	"100.000"	"30.3795"	"7371"	"7371"	"7348"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"251.2"	""	"213.9"	""	"238.5"	""	"303.7"	""	"298.1"	"285.1"	""	"774"	"23"	"35.000"	"28.000"	"0.19085826213056"	""	"0.005617"	"0.06335"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYVPPK"	"[K].dGYVPPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"617.36591"	"1233.72453"	"1233.72434"	"0.15"	"0.00010"	"4/48"	"4"	"48"	"1219261.72265625"	"HCD"	"MS2"	"29.72344"	"83.0"	"100.000"	"45.1026"	"13342"	"13342"	"13319"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"142.1"	""	"92.1"	""	"105.4"	""	"128.4"	"0.5"	"152.0"	"166.2"	""	"759"	"23"	"35.000"	"28.000"	"0.195529270618777"	"22"	"0.00736"	"0.0859"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGVIEK"	"[R].eTGVIEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"617.37549"	"1233.74370"	"1233.74547"	"-1.44"	"-0.00089"	"9/58"	"9"	"58"	"1198635.00073242"	"HCD"	"MS2"	"56.79398"	"104.6"	"100.000"	"44.0665"	"12925"	"12925"	"12897"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"151.7"	""	"118.3"	""	"124.3"	""	"188.2"	""	"202.1"	"208.3"	""	"572"	"23"	"34.000"	"27.000"	"0.128933577498858"	""	"0.002937"	"0.02746"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIEESLK"	"[K].gIEESLk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"617.37579"	"1233.74431"	"1233.74547"	"-0.94"	"-0.00058"	"12/52"	"12"	"52"	"1867827.03448486"	"HCD"	"MS2"	"36.61358"	"134.1"	"100.000"	"54.9932"	"17371"	"17371"	"17352"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"157.9"	""	"163.2"	""	"168.8"	""	"221.5"	"0.5"	"279.3"	"282.9"	""	"568"	"23"	"34.000"	"27.000"	"0.155352533461888"	"27"	"0.004606"	"0.05007"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIEGVTK"	"[K].eIEGVTk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62824"	"Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1"	"Q62824"	"Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"617.37585"	"1233.74443"	"1233.74547"	"-0.84"	"-0.00052"	"6/58"	"6"	"58"	"2075131.23516846"	"HCD"	"MS2"	"10.72567"	"149.2"	"100.000"	"48.8879"	"14885"	"14885"	"14863"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"244.8"	""	"182.9"	""	"202.5"	""	"241.2"	"0.8"	"272.4"	"268.3"	""	"568"	"19"	"34.000"	"27.000"	"0.347791000591274"	"25"	"0.007627"	"0.09203"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGVIEK"	"[R].eTGVIEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"0"	"2"	"2"	"0.3810"	"0.0000"	"1"	"1"	"1"	"617.37592"	"1233.74455"	"1233.74547"	"-0.75"	"-0.00046"	"9/58"	"9"	"58"	"1087238.8369751"	"HCD"	"MS2"	"31.7698"	"96.9"	"100.000"	"44.1957"	"12967"	"12967"	"12939"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"140.1"	""	"114.3"	""	"118.0"	""	"175.8"	""	"172.4"	"199.7"	""	"568"	"21"	"34.000"	"27.000"	"0.244522225620427"	"27"	"0.003449"	"0.0343"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIEGVTK"	"[K].eIEGVTk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62824"	"Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1"	"Q62824"	"Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"617.37598"	"1233.74468"	"1233.74547"	"-0.65"	"-0.00040"	"6/58"	"6"	"58"	"1896300.65197754"	"HCD"	"MS2"	"0"	"130.9"	"100.000"	"49.2918"	"15037"	"15037"	"15014"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"186.6"	"2.2"	"170.3"	""	"174.2"	""	"222.7"	""	"233.3"	"251.2"	""	"568"	"21"	"34.000"	"27.000"	"0.230312940430491"	"25"	"0.005369"	"0.0614"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVSELK"	"[R].aEVSELk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"617.37598"	"1233.74468"	"1233.74547"	"-0.65"	"-0.00040"	"6/54"	"6"	"54"	"11038974.5100708"	"HCD"	"MS2"	"1.091143"	"702.5"	"94.546"	"50.7651"	"15638"	"15638"	"15621"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"968.9"	""	"913.7"	""	"1043.5"	""	"1189.9"	""	"1244.5"	"1302.4"	""	"568"	"35"	"34.000"	"27.000"	"0.00819064946887957"	""	"0.003922"	"0.03952"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVSELK"	"[R].aEVSELk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.2941"	"0.0000"	"1"	"1"	"1"	"617.37604"	"1233.74480"	"1233.74547"	"-0.55"	"-0.00034"	"6/54"	"6"	"54"	"2840294.38195801"	"HCD"	"MS2"	"22.82013"	"203.3"	"100.000"	"50.4803"	"15522"	"15522"	"15502"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"322.7"	""	"275.2"	""	"284.1"	""	"341.1"	""	"350.5"	"350.3"	""	"554"	"34"	"34.000"	"27.000"	"0.0111296054605156"	""	"0.003449"	"0.03371"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVSELK"	"[R].aEVSELk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.2941"	"0.0000"	"1"	"1"	"1"	"617.37604"	"1233.74480"	"1233.74547"	"-0.55"	"-0.00034"	"6/54"	"6"	"54"	"2514795.28613281"	"HCD"	"MS2"	"9.609832"	"190.3"	"100.000"	"50.1132"	"15384"	"15384"	"15366"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"296.6"	""	"252.9"	""	"243.7"	""	"336.5"	"0.7"	"328.1"	"342.8"	""	"554"	"34"	"34.000"	"27.000"	"0.0106777505073419"	""	"0.003507"	"0.03577"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVSELK"	"[R].aEVSELk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"617.37640"	"1233.74553"	"1233.74547"	"0.05"	"0.00003"	"6/54"	"6"	"54"	"11073013.7229004"	"HCD"	"MS2"	"0.8742521"	"774.4"	"100.000"	"50.4029"	"15501"	"15501"	"15490"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1052.6"	""	"989.0"	""	"1086.2"	""	"1306.0"	""	"1419.6"	"1495.4"	""	"529"	"35"	"34.000"	"27.000"	"0.00764584828885667"	""	"0.003449"	"0.03498"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAADGEAK"	"[K].dAADGEAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q05175"	"Brain acid soluble protein 1 OS=Rattus norvegicus OX=10116 GN=Basp1 PE=1 SV=2"	"Q05175"	"Brain acid soluble protein 1 OS=Rattus norvegicus OX=10116 GN=Basp1 PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"617.83771"	"1234.66814"	"1234.66795"	"0.15"	"0.00009"	"11/66"	"11"	"66"	"1145902.4822998"	"HCD"	"MS2"	"0"	"103.9"	"100.000"	"25.6400"	"5449"	"5449"	"5418"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"133.1"	""	"86.5"	""	"96.4"	""	"228.1"	"0.1"	"226.9"	"216.6"	""	"816"	"35"	"36.000"	"29.000"	"0.0127544038178658"	""	"0"	"0.003627"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAADGEAK"	"[K].dAADGEAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q05175"	"Brain acid soluble protein 1 OS=Rattus norvegicus OX=10116 GN=Basp1 PE=1 SV=2"	"Q05175"	"Brain acid soluble protein 1 OS=Rattus norvegicus OX=10116 GN=Basp1 PE=1 SV=2"	"0"	"2"	"2"	"0.4857"	"0.0000"	"1"	"1"	"1"	"617.83789"	"1234.66850"	"1234.66795"	"0.45"	"0.00028"	"7/66"	"7"	"66"	"777872.313293457"	"HCD"	"MS2"	"0"	"70.8"	"100.000"	"25.6748"	"5448"	"5448"	"5425"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.6"	""	"53.4"	""	"68.4"	""	"161.4"	""	"152.7"	"136.4"	""	"816"	"35"	"36.000"	"29.000"	"0.0119856105800031"	""	"0"	"0.002325"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETASQLK"	"[K].eTASQLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"617.87347"	"1234.73967"	"1234.74072"	"-0.85"	"-0.00053"	"6/58"	"6"	"58"	"2075809.60455322"	"HCD"	"MS2"	"11.59302"	"171.8"	"100.000"	"35.4971"	"9442"	"9442"	"9425"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"182.3"	""	"181.1"	""	"187.3"	""	"322.3"	""	"396.2"	"365.9"	""	"545"	"34"	"34.000"	"27.000"	"0.0104319742553834"	""	"0.005921"	"0.06902"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLETQTK"	"[R].gLETQTk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"617.87354"	"1234.73979"	"1234.74072"	"-0.75"	"-0.00046"	"12/58"	"12"	"58"	"4678198.57702637"	"HCD"	"MS2"	"18.77443"	"372.6"	"100.000"	"34.6252"	"9082"	"9082"	"9060"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"670.9"	""	"507.8"	""	"387.6"	""	"659.9"	""	"683.6"	"625.7"	""	"545"	"28"	"34.000"	"27.000"	"0.0475736536670837"	"22"	"0.004942"	"0.05317"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLETQTK"	"[R].gLETQTk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"617.87360"	"1234.73992"	"1234.74072"	"-0.65"	"-0.00040"	"12/58"	"12"	"58"	"4690808.0289917"	"HCD"	"MS2"	"21.59465"	"384.4"	"100.000"	"34.5386"	"9053"	"9053"	"9031"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"677.7"	""	"546.5"	""	"373.1"	""	"705.5"	""	"703.5"	"634.1"	""	"545"	"27"	"34.000"	"27.000"	"0.0605851945202507"	""	"0.004942"	"0.05566"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETASQLK"	"[K].eTASQLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"617.87402"	"1234.74077"	"1234.74072"	"0.04"	"0.00002"	"6/58"	"6"	"58"	"2007769.40136719"	"HCD"	"MS2"	"0"	"164.9"	"100.000"	"35.6640"	"9505"	"9505"	"9487"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"171.5"	""	"169.5"	""	"171.4"	""	"299.3"	""	"381.3"	"379.1"	""	"506"	"34"	"34.000"	"27.000"	"0.00944322899223172"	""	"0.005119"	"0.05825"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTTAWTVGR"	"[R].dTTAWTVGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"618.33234"	"1235.65740"	"1235.65817"	"-0.62"	"-0.00039"	"6/74"	"6"	"74"	"3571738.13110352"	"HCD"	"MS2"	"10.62237"	"185.1"	"100.000"	"50.8954"	"15702"	"15702"	"15683"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"276.0"	""	"255.9"	""	"251.1"	""	"270.2"	"2.2"	"388.6"	"310.4"	""	"756"	"31"	"35.000"	"28.000"	"0.0270079611256544"	"27"	"0"	"0.001622"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTTAWTVGR"	"[R].dTTAWTVGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"618.33295"	"1235.65862"	"1235.65817"	"0.36"	"0.00023"	"6/74"	"6"	"74"	"3134167.26837158"	"HCD"	"MS2"	"13.98946"	"169.2"	"100.000"	"51.1930"	"15812"	"15812"	"15794"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"235.9"	""	"231.8"	""	"222.7"	""	"242.5"	""	"404.6"	"278.9"	""	"780"	"31"	"35.000"	"28.000"	"0.029721081390991"	"27"	"0"	"0.001445"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EADPMSK"	"[R].eADPMSk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"3"	"618.33722"	"1235.66716"	"1235.67059"	"-2.78"	"-0.00172"	"4/58"	"4"	"58"	"1600318.16204834"	"HCD"	"MS2"	"18.40801"	"129.6"	"100.000"	"39.5446"	"11084"	"11084"	"11064"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"191.6"	""	"147.1"	""	"156.5"	""	"167.8"	""	"278.1"	"292.7"	""	"836"	"23"	"36.000"	"29.000"	"0.20472754649601"	"24"	"0.004942"	"0.05377"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPGPSGPQPR"	"[R].nPGPSGPQPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V7P1"	"Syntaxin-12 OS=Rattus norvegicus OX=10116 GN=Stx12 PE=1 SV=1"	"G3V7P1"	"Syntaxin-12 OS=Rattus norvegicus OX=10116 GN=Stx12 PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"618.33734"	"1235.66741"	"1235.66940"	"-1.61"	"-0.00100"	"7/90"	"7"	"90"	"4484382.32757568"	"HCD"	"MS2"	"12.59861"	"193.0"	"100.000"	"22.8350"	"4321"	"4321"	"4294"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"290.1"	""	"237.5"	""	"231.6"	""	"323.5"	"1.1"	"367.7"	"378.9"	""	"835"	"33"	"36.000"	"29.000"	"0.0221644255466438"	"22"	"0"	"0.001303"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPGPSGPQPR"	"[R].nPGPSGPQPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V7P1"	"Syntaxin-12 OS=Rattus norvegicus OX=10116 GN=Stx12 PE=1 SV=1"	"G3V7P1"	"Syntaxin-12 OS=Rattus norvegicus OX=10116 GN=Stx12 PE=1 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"618.33759"	"1235.66789"	"1235.66940"	"-1.22"	"-0.00075"	"8/90"	"8"	"90"	"4518902.3270874"	"HCD"	"MS2"	"18.07564"	"186.8"	"100.000"	"22.8788"	"4322"	"4322"	"4297"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"276.6"	""	"225.3"	""	"231.2"	""	"323.6"	"2.4"	"363.9"	"348.0"	""	"818"	"26"	"36.000"	"29.000"	"0.102499868449013"	"22"	"0"	"0.001139"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDPTDAK"	"[K].mDPTDAk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63692"	"Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus OX=10116 GN=Cdc37 PE=1 SV=2"	"Q63692"	"Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus OX=10116 GN=Cdc37 PE=1 SV=2"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"618.33783"	"1235.66838"	"1235.67059"	"-1.79"	"-0.00111"	"6/54"	"6"	"54"	"2701913.19714355"	"HCD"	"MS2"	"13.92088"	"226.9"	"100.000"	"42.0727"	"12113"	"12113"	"12092"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"366.2"	""	"276.1"	""	"267.0"	""	"253.3"	""	"549.4"	"447.1"	""	"828"	"31"	"36.000"	"29.000"	"0.0310456202663637"	"26"	"0.00447"	"0.04824"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EADPMSK"	"[R].eADPMSk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"0"	"2"	"2"	"0.0455"	"0.0000"	"1"	"1"	"3"	"618.33820"	"1235.66911"	"1235.67059"	"-1.20"	"-0.00074"	"5/58"	"5"	"58"	"2187140.23950195"	"HCD"	"MS2"	"45.3673"	"189.0"	"100.000"	"39.6695"	"11126"	"11126"	"11101"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"284.2"	""	"191.1"	""	"227.0"	""	"272.9"	""	"406.9"	"416.5"	""	"802"	"22"	"36.000"	"29.000"	"0.243862135512766"	"28"	"0.003507"	"0.03596"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDPTDAK"	"[K].mDPTDAk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63692"	"Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus OX=10116 GN=Cdc37 PE=1 SV=2"	"Q63692"	"Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus OX=10116 GN=Cdc37 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"618.33838"	"1235.66948"	"1235.67059"	"-0.90"	"-0.00056"	"6/54"	"6"	"54"	"2455480.50140381"	"HCD"	"MS2"	"15.52825"	"201.3"	"100.000"	"42.2271"	"12166"	"12166"	"12145"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"331.2"	""	"229.7"	""	"251.3"	""	"217.7"	"1.7"	"495.8"	"385.5"	""	"802"	"33"	"36.000"	"29.000"	"0.0190609425603065"	"26"	"0.002871"	"0.02714"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSGDSAVK"	"[K].gGSGDSAVk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"618.35315"	"1235.69902"	"1235.69959"	"-0.46"	"-0.00028"	"8/70"	"8"	"70"	"2298240.51757813"	"HCD"	"MS2"	"0"	"188.4"	"100.000"	"24.7976"	"5109"	"5109"	"5086"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"289.2"	""	"189.3"	""	"204.5"	""	"345.2"	""	"364.6"	"394.9"	""	"753"	"48"	"35.000"	"28.000"	"0.00053797857537943"	""	"0"	"0.0003842"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSGDSAVK"	"[K].gGSGDSAVk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"618.35358"	"1235.69988"	"1235.69959"	"0.23"	"0.00015"	"8/70"	"8"	"70"	"2128342.42755127"	"HCD"	"MS2"	"0"	"176.3"	"100.000"	"24.8990"	"5134"	"5134"	"5116"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"239.4"	""	"191.0"	""	"196.3"	""	"329.2"	""	"365.5"	"356.0"	""	"756"	"47"	"35.000"	"28.000"	"0.000754209155058237"	"27"	"0"	"0.0003293"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMDAALK"	"[K].eMDAALk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"618.35663"	"1235.70598"	"1235.70698"	"-0.81"	"-0.00050"	"6/52"	"6"	"52"	"2666494.19677734"	"HCD"	"MS2"	"63.2565"	"178.7"	"100.000"	"53.4438"	"16731"	"16731"	"16706"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"308.6"	""	"265.6"	""	"188.7"	""	"255.3"	""	"342.7"	"336.8"	""	"749"	"30"	"35.000"	"28.000"	"0.041157768686748"	"26"	"0.002973"	"0.02828"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMDAALK"	"[K].eMDAALk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"618.35681"	"1235.70635"	"1235.70698"	"-0.51"	"-0.00032"	"12/52"	"12"	"52"	"3042513.43231201"	"HCD"	"MS2"	"4.365108"	"221.3"	"100.000"	"53.4660"	"16751"	"16751"	"16732"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"352.0"	""	"324.1"	""	"249.3"	""	"270.6"	""	"411.0"	"496.3"	""	"806"	"39"	"36.000"	"29.000"	"0.00472394732315897"	"25"	"0.00263"	"0.02559"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMDAALK"	"[K].eMDAALk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.5750"	"0.0000"	"1"	"1"	"1"	"618.35687"	"1235.70647"	"1235.70698"	"-0.41"	"-0.00026"	"12/52"	"12"	"52"	"2872213.38818359"	"HCD"	"MS2"	"3.347873"	"213.9"	"100.000"	"53.7359"	"16850"	"16850"	"16833"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"346.5"	""	"342.9"	""	"226.4"	""	"251.9"	""	"404.5"	"458.4"	""	"803"	"40"	"36.000"	"29.000"	"0.00438213295084176"	""	"0.0023"	"0.02297"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMDAALK"	"[K].eMDAALk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"618.35712"	"1235.70696"	"1235.70698"	"-0.02"	"-0.00001"	"6/52"	"6"	"52"	"2464758.82562256"	"HCD"	"MS2"	"61.86379"	"167.6"	"100.000"	"53.1624"	"16627"	"16627"	"16606"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"275.7"	""	"260.9"	""	"181.2"	""	"230.7"	""	"326.3"	"314.7"	""	"799"	"31"	"36.000"	"29.000"	"0.0326224657357758"	"26"	"0.0023"	"0.02302"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSDDVK"	"[K].lTSDDVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.2778"	"0.0000"	"1"	"1"	"1"	"618.36481"	"1235.72234"	"1235.72474"	"-1.94"	"-0.00120"	"6/54"	"6"	"54"	"3641933.04217529"	"HCD"	"MS2"	"0"	"287.4"	"100.000"	"46.6115"	"13946"	"13946"	"13927"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"369.4"	""	"325.8"	""	"406.5"	""	"496.3"	""	"607.3"	"525.4"	""	"646"	"36"	"35.000"	"28.000"	"0.00875391897100741"	""	"0.003922"	"0.03932"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSDDVK"	"[K].lTSDDVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.2778"	"0.0000"	"1"	"1"	"1"	"618.36481"	"1235.72234"	"1235.72474"	"-1.94"	"-0.00120"	"6/54"	"6"	"54"	"3335872.2355957"	"HCD"	"MS2"	"0"	"259.6"	"100.000"	"46.4553"	"13894"	"13894"	"13874"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"335.2"	""	"295.4"	""	"356.2"	""	"440.0"	""	"553.1"	"485.8"	""	"646"	"36"	"35.000"	"28.000"	"0.00889615871178227"	""	"0.003967"	"0.04108"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAETTDK"	"[K].lAETTDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"618.36536"	"1235.72344"	"1235.72474"	"-1.05"	"-0.00065"	"10/54"	"10"	"54"	"2437042.84381104"	"HCD"	"MS2"	"0"	"189.6"	"100.000"	"39.8962"	"11228"	"11228"	"11204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"257.3"	""	"233.6"	""	"236.0"	""	"330.7"	""	"377.5"	"364.6"	""	"596"	"29"	"34.000"	"27.000"	"0.0385670360752096"	"26"	"0.004942"	"0.05558"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ESTAIEK"	"[K].eSTAIEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"618.36536"	"1235.72344"	"1235.72474"	"-1.05"	"-0.00065"	"10/58"	"10"	"58"	"2144632.1652832"	"HCD"	"MS2"	"25.61525"	"175.7"	"100.000"	"37.0690"	"10075"	"10075"	"10050"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"178.7"	""	"180.9"	""	"190.5"	""	"328.5"	"1.2"	"418.5"	"374.5"	""	"596"	"23"	"34.000"	"27.000"	"0.138425552016379"	"20"	"0.009788"	"0.1276"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"QSTAIQK"	"[K].qSTAIqk.[Q]"	"N-Term(TMT6plex); Q1(Deamidated); Q6(Deamidated); K7(TMT6plex)"	"1"	"1"	"D4A770"	"Protein C12orf4 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"D4A770"	"Protein C12orf4 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"618.36536"	"1235.72344"	"1235.72474"	"-1.05"	"-0.00065"	"10/62"	"10"	"62"	"2144632.1652832"	"HCD"	"MS2"	"25.61525"	"175.7"	"100.000"	"37.0690"	"10075"	"10075"	"10050"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"178.7"	""	"180.9"	""	"190.5"	""	"328.5"	"1.2"	"418.5"	"374.5"	""	"596"	"23"	"34.000"	"27.000"	"0.138425552016379"	"20"	"0.009788"	"0.1276"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAETTDK"	"[K].lAETTDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"618.36572"	"1235.72417"	"1235.72474"	"-0.46"	"-0.00029"	"12/54"	"12"	"54"	"2439321.15667725"	"HCD"	"MS2"	"0"	"197.8"	"100.000"	"40.0900"	"11298"	"11298"	"11273"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"263.1"	""	"241.7"	""	"262.8"	""	"349.6"	""	"379.8"	"381.9"	""	"574"	"25"	"34.000"	"27.000"	"0.0858779950706552"	"25"	"0.004942"	"0.05388"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSDDVK"	"[K].lTSDDVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.2941"	"0.0000"	"1"	"1"	"1"	"618.36597"	"1235.72466"	"1235.72474"	"-0.07"	"-0.00004"	"6/54"	"6"	"54"	"3804183.03692627"	"HCD"	"MS2"	"27.09139"	"295.8"	"100.000"	"46.1614"	"13774"	"13774"	"13753"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"402.2"	""	"356.5"	""	"405.2"	""	"510.4"	""	"634.3"	"499.1"	""	"566"	"34"	"34.000"	"27.000"	"0.0118245993760994"	""	"0.002711"	"0.02593"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSDDVK"	"[K].lTSDDVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"618.36621"	"1235.72515"	"1235.72474"	"0.33"	"0.00020"	"6/54"	"6"	"54"	"2982959.98205566"	"HCD"	"MS2"	"30.25968"	"237.0"	"100.000"	"46.3245"	"13829"	"13829"	"13805"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"316.2"	""	"285.8"	""	"305.8"	""	"425.0"	""	"531.0"	"400.2"	""	"564"	"35"	"34.000"	"27.000"	"0.00847713517341161"	""	"0.002379"	"0.02467"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFISAAER"	"[K].dVFISAAER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"618.84149"	"1236.67571"	"1236.67857"	"-2.31"	"-0.00143"	"6/78"	"6"	"78"	"602455.854370117"	"HCD"	"MS2"	"0"	"39.4"	"100.000"	"62.1456"	"20251"	"20251"	"20232"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.5"	""	"48.6"	""	"55.7"	""	"61.5"	""	"74.3"	"80.0"	""	"797"	"39"	"36.000"	"29.000"	"0.00489134533616625"	"27"	"0"	"0.001775"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFISAAER"	"[K].dVFISAAER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"618.84155"	"1236.67583"	"1236.67857"	"-2.21"	"-0.00137"	"7/78"	"7"	"78"	"5188375.52020264"	"HCD"	"MS2"	"0"	"215.8"	"100.000"	"61.8365"	"20129"	"20129"	"20112"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"352.1"	""	"265.6"	""	"282.9"	""	"349.1"	"1.0"	"409.2"	"383.8"	""	"820"	"50"	"36.000"	"29.000"	"0.000417622469102188"	"27"	"0"	"0.0005822"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADEAYLIGR"	"[K].aDEAYLIGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"0.3659"	"0.0000"	"1"	"1"	"1"	"618.84235"	"1236.67742"	"1236.67857"	"-0.93"	"-0.00058"	"8/66"	"8"	"66"	"1018110.84796143"	"HCD"	"MS2"	"0"	"52.4"	"100.000"	"61.5496"	"20012"	"20012"	"19985"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"84.2"	""	"63.8"	""	"72.8"	""	"77.1"	""	"102.4"	"96.3"	""	"816"	"41"	"36.000"	"29.000"	"0.0034726431958657"	""	"0"	"0.0007741"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFISAAER"	"[K].dVFISAAER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"618.84241"	"1236.67754"	"1236.67857"	"-0.83"	"-0.00051"	"7/78"	"7"	"78"	"4638615.50146484"	"HCD"	"MS2"	"0"	"199.7"	"100.000"	"61.9922"	"20175"	"20175"	"20165"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"316.7"	""	"239.6"	""	"275.2"	""	"314.6"	""	"365.3"	"381.8"	""	"834"	"50"	"36.000"	"29.000"	"0.000378561161084303"	"25"	"0"	"0.0003048"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFISAAER"	"[K].dVFISAAER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"618.84290"	"1236.67851"	"1236.67857"	"-0.04"	"-0.00003"	"7/78"	"7"	"78"	"623371.07232666"	"HCD"	"MS2"	"0"	"37.5"	"100.000"	"62.2579"	"20280"	"20280"	"20270"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.0"	""	"44.9"	""	"51.0"	""	"59.8"	""	"72.8"	"71.4"	""	"810"	"43"	"36.000"	"29.000"	"0.00223077117044188"	"24"	"0"	"0.001002"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADEAYLIGR"	"[K].aDEAYLIGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"618.84302"	"1236.67876"	"1236.67857"	"0.15"	"0.00010"	"8/66"	"8"	"66"	"1274265.66400146"	"HCD"	"MS2"	"0"	"65.1"	"100.000"	"61.7056"	"20060"	"20060"	"20033"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"106.2"	""	"77.2"	""	"81.8"	""	"94.9"	""	"129.2"	"132.2"	""	"811"	"35"	"36.000"	"29.000"	"0.0116142416679712"	""	"0"	"0.0008064"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EGSEAASK"	"[K].eGSEAASk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"618.84473"	"1236.68218"	"1236.68360"	"-1.15"	"-0.00071"	"7/68"	"7"	"68"	"1891142.20330811"	"HCD"	"MS2"	"24.35929"	"135.1"	"100.000"	"23.4708"	"4581"	"4581"	"4561"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"181.3"	""	"146.4"	""	"165.9"	""	"218.2"	""	"280.6"	"293.4"	""	"847"	"14"	"36.000"	"29.000"	"1.54829394248159"	"22"	"0.002547"	"0.02533"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGSEAASK"	"[K].eGSEAASk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.0625"	"0.0000"	"1"	"1"	"1"	"618.84521"	"1236.68315"	"1236.68360"	"-0.36"	"-0.00022"	"7/68"	"7"	"68"	"1685217.89202881"	"HCD"	"MS2"	"39.70691"	"129.9"	"100.000"	"23.5397"	"4592"	"4592"	"4569"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"177.8"	""	"137.6"	""	"149.1"	""	"213.0"	""	"296.1"	"270.5"	""	"825"	"16"	"36.000"	"29.000"	"0.991799655002859"	"28"	"0.001374"	"0.01654"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASANMDLMR"	"[K].aSANMDLMR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"619.31476"	"1237.62224"	"1237.62304"	"-0.65"	"-0.00040"	"7/82"	"7"	"82"	"2576459.93499756"	"HCD"	"MS2"	"13.13269"	"145.4"	"100.000"	"51.2247"	"15836"	"15836"	"15815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"227.3"	""	"209.1"	""	"221.7"	""	"160.4"	""	"275.6"	"288.3"	""	"565"	"36"	"34.000"	"27.000"	"0.0073117014853075"	"21"	"0"	"0.0008968"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASANMDLMR"	"[K].aSANMDLMR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"619.31512"	"1237.62297"	"1237.62304"	"-0.06"	"-0.00004"	"7/82"	"7"	"82"	"2444751.77740479"	"HCD"	"MS2"	"9.92346"	"137.5"	"100.000"	"51.5317"	"15950"	"15950"	"15931"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"215.4"	""	"210.2"	""	"197.3"	""	"136.0"	""	"268.6"	"277.6"	""	"561"	"46"	"34.000"	"27.000"	"0.000668240611155114"	"24"	"0"	"0.0005965"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSSMAAGLER"	"[R].sSSMAAGLER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6GMN2"	"Brain-specific angiogenesis inhibitor 1-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Baiap2 PE=1 SV=1"	"Q6GMN2"	"Brain-specific angiogenesis inhibitor 1-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Baiap2 PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"619.32410"	"1237.64092"	"1237.64080"	"0.09"	"0.00006"	"6/88"	"6"	"88"	"509938.875793457"	"HCD"	"MS2"	"0"	"41.9"	"100.000"	"37.4120"	"10219"	"10219"	"10199"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.7"	""	"47.1"	""	"51.2"	""	"60.8"	""	"90.6"	"86.9"	""	"660"	"22"	"35.000"	"28.000"	"0.211112495709274"	"15"	"0.0008629"	"0.01012"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSSMAAGLER"	"[R].sSSMAAGLER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6GMN2"	"Brain-specific angiogenesis inhibitor 1-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Baiap2 PE=1 SV=1"	"Q6GMN2"	"Brain-specific angiogenesis inhibitor 1-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Baiap2 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"619.32416"	"1237.64104"	"1237.64080"	"0.19"	"0.00012"	"7/88"	"7"	"88"	"506259.666992188"	"HCD"	"MS2"	"0"	"41.9"	"100.000"	"37.5784"	"10280"	"10280"	"10266"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.1"	""	"48.3"	""	"59.2"	""	"63.1"	""	"86.7"	"84.8"	""	"657"	"28"	"35.000"	"28.000"	"0.0473734892975919"	"18"	"0.0006732"	"0.008598"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGPDSEK"	"[K].fGPDSEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K3K4"	"Serpin B10 OS=Rattus norvegicus OX=10116 GN=Serpinb10 PE=2 SV=1"	"Q8K3K4"	"Serpin B10 OS=Rattus norvegicus OX=10116 GN=Serpinb10 PE=2 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"619.34442"	"1237.68157"	"1237.68287"	"-1.06"	"-0.00065"	"9/52"	"9"	"52"	"1730823.92352295"	"HCD"	"MS2"	"17.08104"	"145.1"	"100.000"	"45.4751"	"13494"	"13494"	"13477"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"211.3"	""	"180.0"	""	"188.7"	""	"260.2"	"1.8"	"263.0"	"269.7"	""	"799"	"23"	"36.000"	"29.000"	"0.216529355715449"	"20"	"0.007808"	"0.09607"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGEVYPK"	"[K].sGEVYPk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"0"	"2"	"2"	"0.4091"	"0.0000"	"1"	"1"	"1"	"619.36279"	"1237.71831"	"1237.71926"	"-0.77"	"-0.00048"	"6/52"	"6"	"52"	"2071350.2824707"	"HCD"	"MS2"	"10.21376"	"166.8"	"100.000"	"39.8094"	"11183"	"11183"	"11165"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"266.4"	""	"209.4"	""	"246.0"	""	"234.5"	""	"315.5"	"312.1"	""	"533"	"22"	"34.000"	"27.000"	"0.181425034091882"	"27"	"0.004022"	"0.04323"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGEVYPK"	"[K].sGEVYPk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"619.36285"	"1237.71843"	"1237.71926"	"-0.67"	"-0.00041"	"9/52"	"9"	"52"	"2158044.53100586"	"HCD"	"MS2"	"23.2365"	"174.6"	"100.000"	"39.6316"	"11120"	"11120"	"11094"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"283.0"	""	"237.9"	""	"237.2"	""	"254.3"	""	"317.3"	"325.8"	""	"533"	"25"	"34.000"	"27.000"	"0.0924053706455996"	""	"0.003449"	"0.0342"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPDWPSDR"	"[R].hPDWPSDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q3"	"Hyaluronidase-2 OS=Rattus norvegicus OX=10116 GN=Hyal2 PE=2 SV=1"	"Q9Z2Q3"	"Hyaluronidase-2 OS=Rattus norvegicus OX=10116 GN=Hyal2 PE=2 SV=1"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"413.54147"	"1238.60987"	"1238.61155"	"-1.36"	"-0.00056"	"7/64"	"7"	"64"	"3158625.50238037"	"HCD"	"MS2"	"59.3318"	"106.1"	"100.000"	"30.3083"	"7342"	"7342"	"7322"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"131.6"	""	"129.0"	""	"141.4"	""	"160.2"	"0.3"	"228.1"	"216.7"	""	"484"	"37"	"33.000"	"26.000"	"0.00512643394730137"	"24"	"0.002973"	"0.02861"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAYGDQYR"	"[R].hAYGDQYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"413.54150"	"1238.60996"	"1238.61155"	"-1.29"	"-0.00053"	"7/60"	"7"	"60"	"3332037.98791504"	"HCD"	"MS2"	"26.81035"	"121.5"	"100.000"	"21.2637"	"3683"	"3683"	"3656"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"172.8"	""	"153.5"	""	"168.2"	""	"185.5"	"3.7"	"239.2"	"229.2"	""	"484"	"27"	"33.000"	"26.000"	"0.0432329993114196"	"14"	"0.003449"	"0.03404"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAYGDQYR"	"[R].hAYGDQYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"619.80884"	"1238.61040"	"1238.61155"	"-0.93"	"-0.00058"	"7/60"	"7"	"60"	"864819.752563477"	"HCD"	"MS2"	"0"	"40.8"	"100.000"	"21.2660"	"3684"	"3684"	"3656"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.2"	""	"53.9"	""	"52.4"	""	"58.5"	""	"66.8"	"90.3"	""	"485"	"15"	"33.000"	"26.000"	"0.75633072414278"	"15"	"0.006685"	"0.07482"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAYGDQYR"	"[R].hAYGDQYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"413.54169"	"1238.61051"	"1238.61155"	"-0.84"	"-0.00035"	"7/60"	"7"	"60"	"4443854.20544434"	"HCD"	"MS2"	"19.25078"	"143.5"	"100.000"	"21.3100"	"3684"	"3684"	"3658"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"211.8"	""	"172.4"	""	"196.7"	""	"215.5"	""	"296.9"	"269.7"	""	"485"	"28"	"33.000"	"26.000"	"0.0387892821939057"	"14"	"0.0007829"	"0.009409"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPDWPSDR"	"[R].hPDWPSDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q3"	"Hyaluronidase-2 OS=Rattus norvegicus OX=10116 GN=Hyal2 PE=2 SV=1"	"Q9Z2Q3"	"Hyaluronidase-2 OS=Rattus norvegicus OX=10116 GN=Hyal2 PE=2 SV=1"	"0"	"3"	"3"	"0.6538"	"0.0000"	"1"	"1"	"1"	"413.54175"	"1238.61069"	"1238.61155"	"-0.69"	"-0.00029"	"6/64"	"6"	"64"	"2997345.12957764"	"HCD"	"MS2"	"32.7217"	"106.0"	"100.000"	"30.3270"	"7338"	"7338"	"7317"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"155.6"	""	"134.7"	""	"120.6"	""	"168.9"	""	"204.2"	"222.0"	""	"483"	"26"	"33.000"	"26.000"	"0.0606620573209563"	"23"	"0.000936"	"0.01305"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAYGDQYR"	"[R].hAYGDQYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.80939"	"1238.61150"	"1238.61155"	"-0.04"	"-0.00003"	"6/60"	"6"	"60"	"1163417.32202148"	"HCD"	"MS2"	"0"	"51.9"	"100.000"	"21.3214"	"3689"	"3689"	"3658"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"88.1"	""	"63.4"	""	"69.4"	""	"78.8"	""	"100.0"	"95.5"	""	"484"	"22"	"33.000"	"26.000"	"0.159520082649126"	"14"	"0.005874"	"0.06605"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVYTGDALR"	"[R].dVYTGDALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.6731"	"0.0000"	"1"	"1"	"1"	"619.83179"	"1238.65630"	"1238.65783"	"-1.24"	"-0.00077"	"7/74"	"7"	"74"	"2016947.11187744"	"HCD"	"MS2"	"6.268634"	"109.9"	"100.000"	"49.2676"	"15039"	"15039"	"15020"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"173.4"	""	"141.9"	""	"146.7"	""	"175.5"	"2.8"	"198.4"	"202.3"	""	"691"	"52"	"35.000"	"28.000"	"0.000194736810087867"	""	"0"	"0.0002047"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVYTGDALR"	"[R].dVYTGDALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"619.83191"	"1238.65654"	"1238.65783"	"-1.04"	"-0.00065"	"7/74"	"7"	"74"	"3092657.30236816"	"HCD"	"MS2"	"3.868319"	"156.8"	"100.000"	"49.6599"	"15187"	"15187"	"15169"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"246.6"	""	"216.1"	"2.2"	"209.5"	""	"235.5"	""	"292.3"	"283.8"	""	"691"	"51"	"35.000"	"28.000"	"0.000305104105594614"	""	"0"	"0.000272"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVYTGDALR"	"[R].dVYTGDALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"619.83240"	"1238.65752"	"1238.65783"	"-0.25"	"-0.00016"	"7/74"	"7"	"74"	"13157620.3101807"	"HCD"	"MS2"	"5.357213"	"393.6"	"54.841"	"49.5604"	"15159"	"15159"	"15142"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"622.2"	""	"531.0"	""	"554.5"	""	"562.0"	""	"745.9"	"715.9"	""	"661"	"45"	"35.000"	"28.000"	"0.00116458572879542"	"25"	"0"	"0.0006174"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVYTGDALR"	"[R].dVYTGDALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"619.83270"	"1238.65813"	"1238.65783"	"0.24"	"0.00015"	"7/74"	"7"	"74"	"10358913.6931152"	"HCD"	"MS2"	"8.890711"	"383.4"	"68.821"	"49.9663"	"15312"	"15312"	"15294"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"598.4"	""	"505.7"	""	"528.4"	""	"542.0"	""	"738.1"	"730.2"	""	"661"	"43"	"35.000"	"28.000"	"0.00156016835137617"	"25"	"0"	"0.0007925"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVLAGHDNR"	"[R].aGVLAGHDNR.[V]"	"N-Term(TMT6plex)"	"1"	"3"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; O35353; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein subunit beta-4 OS=Rattus norvegicus OX=10116 GN=Gnb4 PE=2 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.84283"	"1238.67839"	"1238.68030"	"-1.54"	"-0.00095"	"7/74"	"7"	"74"	"721460.094848633"	"HCD"	"MS2"	"0"	"48.4"	"100.000"	"24.3788"	"4942"	"4942"	"4927"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.0"	""	"50.3"	""	"57.6"	""	"92.8"	""	"98.4"	"109.3"	""	"694"	"41"	"35.000"	"28.000"	"0.00254876312250519"	"15"	"0"	"0.0001179"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAENFDK"	"[K].gAENFDk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05696"	"Protein kinase C alpha type OS=Rattus norvegicus OX=10116 GN=Prkca PE=1 SV=3"	"P05696"	"Protein kinase C alpha type OS=Rattus norvegicus OX=10116 GN=Prkca PE=1 SV=3"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"619.84296"	"1238.67864"	"1238.67812"	"0.41"	"0.00026"	"12/60"	"12"	"60"	"2785481.19165039"	"HCD"	"MS2"	"5.096269"	"244.5"	"100.000"	"40.5491"	"11494"	"11494"	"11475"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"287.3"	""	"288.7"	""	"315.0"	""	"410.0"	""	"518.5"	"508.8"	""	"693"	"24"	"35.000"	"28.000"	"0.154419890069735"	"27"	"0.008052"	"0.09943"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVLAGHDNR"	"[R].aGVLAGHDNR.[V]"	"N-Term(TMT6plex)"	"1"	"3"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; O35353; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein subunit beta-4 OS=Rattus norvegicus OX=10116 GN=Gnb4 PE=2 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"619.84332"	"1238.67937"	"1238.68030"	"-0.75"	"-0.00047"	"8/74"	"8"	"74"	"529888.918945313"	"HCD"	"MS2"	"0"	"35.5"	"100.000"	"24.4726"	"4964"	"4964"	"4952"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.7"	""	"37.0"	""	"42.1"	""	"67.3"	""	"83.7"	"70.3"	""	"695"	"36"	"35.000"	"28.000"	"0.00820266186030249"	"20"	"0"	"0.00348"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVLAGHDNR"	"[R].aGVLAGHDNR.[V]"	"N-Term(TMT6plex)"	"1"	"3"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; O35353; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein subunit beta-4 OS=Rattus norvegicus OX=10116 GN=Gnb4 PE=2 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"3"	"3"	"0.9155"	"0.0000"	"1"	"1"	"1"	"413.56467"	"1238.67945"	"1238.68030"	"-0.69"	"-0.00028"	"9/74"	"9"	"74"	"63440882.2266846"	"HCD"	"MS2"	"6.670002"	"296.2"	"37.765"	"24.0956"	"4828"	"4828"	"4813"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"278.4"	""	"371.1"	""	"344.7"	""	"556.2"	"4.1"	"621.1"	"639.7"	""	"685"	"71"	"35.000"	"28.000"	"2.79036217277137E-06"	"23"	"0"	"0.0001562"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVLAGHDNR"	"[R].aGVLAGHDNR.[V]"	"N-Term(TMT6plex)"	"1"	"3"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; O35353; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein subunit beta-4 OS=Rattus norvegicus OX=10116 GN=Gnb4 PE=2 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"3"	"3"	"0.8923"	"0.0000"	"1"	"1"	"1"	"413.56470"	"1238.67954"	"1238.68030"	"-0.61"	"-0.00025"	"8/74"	"8"	"74"	"57715753.3544922"	"HCD"	"MS2"	"7.664941"	"310.9"	"42.317"	"24.1663"	"4841"	"4841"	"4821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"301.5"	""	"379.6"	""	"369.7"	""	"571.4"	"3.1"	"660.8"	"668.8"	""	"685"	"65"	"35.000"	"28.000"	"1.09310171537201E-05"	"23"	"0"	"0.0001765"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVLAGHDNR"	"[R].aGVLAGHDNR.[V]"	"N-Term(TMT6plex)"	"1"	"3"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; O35353; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein subunit beta-4 OS=Rattus norvegicus OX=10116 GN=Gnb4 PE=2 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.84363"	"1238.67998"	"1238.68030"	"-0.26"	"-0.00016"	"9/74"	"9"	"74"	"7480148.64672852"	"HCD"	"MS2"	"0"	"273.4"	"100.000"	"24.0818"	"4823"	"4823"	"4797"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"276.9"	""	"341.6"	""	"312.2"	""	"494.7"	""	"580.1"	"600.0"	""	"685"	"48"	"35.000"	"28.000"	"0.000486027201178514"	"16"	"0"	"0.0001016"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVLAGHDNR"	"[R].aGVLAGHDNR.[V]"	"N-Term(TMT6plex)"	"1"	"3"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; O35353; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein subunit beta-4 OS=Rattus norvegicus OX=10116 GN=Gnb4 PE=2 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.84363"	"1238.67998"	"1238.68030"	"-0.26"	"-0.00016"	"13/74"	"13"	"74"	"7537738.41375732"	"HCD"	"MS2"	"0"	"284.6"	"100.000"	"24.1770"	"4846"	"4846"	"4821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"273.7"	""	"357.7"	""	"341.9"	""	"493.1"	""	"622.8"	"621.8"	""	"685"	"47"	"35.000"	"28.000"	"0.000661699148578296"	"16"	"0"	"0.0001915"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAENFDK"	"[K].gAENFDk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05696"	"Protein kinase C alpha type OS=Rattus norvegicus OX=10116 GN=Prkca PE=1 SV=3"	"P05696"	"Protein kinase C alpha type OS=Rattus norvegicus OX=10116 GN=Prkca PE=1 SV=3"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"619.84406"	"1238.68083"	"1238.67812"	"2.19"	"0.00136"	"12/60"	"12"	"60"	"2539573.26251221"	"HCD"	"MS2"	"4.150113"	"224.6"	"100.000"	"40.7016"	"11546"	"11546"	"11528"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"287.8"	""	"259.3"	""	"274.8"	""	"395.2"	""	"458.3"	"462.2"	""	"715"	"23"	"35.000"	"28.000"	"0.163409027787318"	"27"	"0.009021"	"0.1158"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVHDLSVPR"	"[K].sVHDLSVPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P97521"	"Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1"	"P97521"	"Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"413.57281"	"1238.70389"	"1238.70545"	"-1.26"	"-0.00052"	"7/74"	"7"	"74"	"1288454.1237793"	"HCD"	"MS2"	"37.00444"	"38.0"	"100.000"	"38.7834"	"10774"	"10774"	"10752"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.8"	""	"45.9"	""	"55.8"	""	"61.5"	""	"79.1"	"80.6"	""	"573"	"25"	"34.000"	"27.000"	"0.099111631747184"	"20"	"0"	"0.001899"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVHDLSVPR"	"[K].sVHDLSVPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P97521"	"Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1"	"P97521"	"Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"413.57324"	"1238.70517"	"1238.70545"	"-0.22"	"-0.00009"	"7/74"	"7"	"74"	"1345396.40014648"	"HCD"	"MS2"	"44.72736"	"35.9"	"100.000"	"38.9890"	"10849"	"10849"	"10821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.5"	""	"45.2"	""	"51.9"	""	"61.5"	""	"73.4"	"68.3"	""	"542"	"23"	"34.000"	"27.000"	"0.123301764300663"	"18"	"0"	"0.002207"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSYMNPER"	"[K].nSYMNPER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"620.30200"	"1239.59673"	"1239.59894"	"-1.78"	"-0.00110"	"10/80"	"10"	"80"	"1069765.84875488"	"HCD"	"MS2"	"54.56162"	"67.1"	"100.000"	"31.2127"	"7706"	"7706"	"7683"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"84.7"	""	"81.9"	""	"91.1"	""	"100.6"	""	"138.0"	"145.8"	""	"359"	"6"	"32.000"	"25.000"	"4.5088361445597"	"16"	"0.007627"	"0.09384"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSYMNPER"	"[K].nSYMNPER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"620.30261"	"1239.59795"	"1239.59894"	"-0.80"	"-0.00049"	"5/80"	"5"	"80"	"1363316.32263184"	"HCD"	"MS2"	"43.04208"	"88.4"	"100.000"	"31.3166"	"7739"	"7739"	"7711"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"117.0"	""	"89.9"	""	"111.7"	""	"124.3"	""	"195.4"	"209.6"	""	"371"	"17"	"32.000"	"25.000"	"0.404896398646877"	"18"	"0.001886"	"0.0218"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSMQTPMR"	"[R].sGSMQTPmR.[T]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"620.30475"	"1239.60222"	"1239.60231"	"-0.07"	"-0.00004"	"7/82"	"7"	"82"	"878144.415222168"	"HCD"	"MS2"	"17.59272"	"46.5"	"100.000"	"23.1492"	"4450"	"4450"	"4421"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.6"	""	"58.3"	""	"65.8"	""	"77.5"	"1.6"	"86.4"	"80.4"	""	"381"	"15"	"32.000"	"25.000"	"0.551943953457102"	"15"	"0.003111"	"0.03184"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSMQTPMR"	"[R].sGSMQTPmR.[T]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"620.30518"	"1239.60307"	"1239.60231"	"0.62"	"0.00038"	"11/82"	"11"	"82"	"629975.524902344"	"HCD"	"MS2"	"30.81196"	"34.6"	"100.000"	"23.2596"	"4478"	"4478"	"4447"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.9"	""	"50.0"	""	"48.2"	""	"56.1"	"0.8"	"63.3"	"61.6"	""	"397"	"11"	"32.000"	"25.000"	"1.56588733347283"	"15"	"0.003189"	"0.0319"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDYGSLSGR"	"[R].vGDYGSLSGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"620.32965"	"1239.65203"	"1239.65308"	"-0.85"	"-0.00053"	"9/82"	"9"	"82"	"1049151.20324707"	"HCD"	"MS2"	"0"	"57.1"	"100.000"	"48.9293"	"14902"	"14902"	"14879"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"93.5"	""	"79.1"	""	"81.0"	""	"79.5"	""	"99.4"	"108.6"	""	"583"	"29"	"34.000"	"27.000"	"0.0391415986171688"	"16"	"0"	"0.0008492"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDYGSLSGR"	"[R].vGDYGSLSGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"620.32965"	"1239.65203"	"1239.65308"	"-0.85"	"-0.00053"	"9/82"	"9"	"82"	"1064096.24194336"	"HCD"	"MS2"	"0"	"59.2"	"100.000"	"49.2872"	"15035"	"15035"	"15014"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.1"	""	"81.1"	""	"95.2"	""	"83.0"	"2.5"	"109.8"	"103.2"	""	"583"	"29"	"34.000"	"27.000"	"0.0374661061373564"	"17"	"0"	"0.0001136"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDYGSLSGR"	"[R].vGDYGSLSGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"620.33032"	"1239.65337"	"1239.65308"	"0.23"	"0.00014"	"8/82"	"8"	"82"	"4127723.26580811"	"HCD"	"MS2"	"21.73038"	"220.2"	"100.000"	"48.8176"	"14843"	"14843"	"14824"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"381.2"	""	"302.9"	""	"332.7"	""	"330.0"	""	"380.7"	"356.1"	""	"563"	"44"	"34.000"	"27.000"	"0.0011415065272872"	"20"	"0"	"5.126E-05"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDYGSLSGR"	"[R].vGDYGSLSGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"620.33051"	"1239.65373"	"1239.65308"	"0.53"	"0.00033"	"9/82"	"9"	"82"	"4102158.87689209"	"HCD"	"MS2"	"17.1094"	"215.8"	"100.000"	"48.4503"	"14706"	"14706"	"14690"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"378.1"	""	"301.9"	""	"324.3"	""	"318.7"	""	"356.6"	"364.5"	""	"585"	"44"	"34.000"	"27.000"	"0.0013035445265627"	"19"	"0"	"9.052E-05"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSTGTSTTR"	"[K].vTSTGTSTTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"620.33990"	"1239.67253"	"1239.67421"	"-1.35"	"-0.00084"	"8/86"	"8"	"86"	"7938060.30523682"	"HCD"	"MS2"	"6.419045"	"310.8"	"100.000"	"21.7705"	"3888"	"3888"	"3873"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"336.8"	""	"397.2"	""	"265.1"	""	"745.3"	"0.8"	"682.8"	"524.4"	""	"570"	"48"	"34.000"	"27.000"	"0.000430372843936782"	"21"	"0"	"0.0001876"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSTGTSTTR"	"[K].vTSTGTSTTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.9057"	"0.0000"	"1"	"1"	"1"	"620.34009"	"1239.67290"	"1239.67421"	"-1.06"	"-0.00066"	"8/86"	"8"	"86"	"2369703.5567627"	"HCD"	"MS2"	"0"	"107.9"	"100.000"	"22.0778"	"4012"	"4012"	"3987"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"122.5"	""	"129.5"	""	"94.7"	""	"249.8"	""	"240.7"	"189.4"	""	"561"	"53"	"34.000"	"27.000"	"0.000146532131014253"	"20"	"0"	"0.0001176"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSTGTSTTR"	"[K].vTSTGTSTTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"620.34021"	"1239.67314"	"1239.67421"	"-0.86"	"-0.00053"	"8/86"	"8"	"86"	"2427565.52941895"	"HCD"	"MS2"	"0"	"116.9"	"100.000"	"22.1858"	"4039"	"4039"	"4012"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"133.6"	""	"133.8"	""	"98.4"	""	"275.0"	"0.0"	"264.0"	"206.3"	""	"561"	"51"	"34.000"	"27.000"	"0.000216238423072573"	"22"	"0"	"0.0001068"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSTGTSTTR"	"[K].vTSTGTSTTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"620.34064"	"1239.67400"	"1239.67421"	"-0.17"	"-0.00011"	"16/86"	"16"	"86"	"16574674.0283203"	"HCD"	"MS2"	"0"	"669.3"	"100.000"	"21.8511"	"3903"	"3903"	"3886"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"697.9"	""	"795.8"	""	"562.7"	""	"1636.0"	"1.8"	"1553.9"	"1114.3"	""	"575"	"51"	"34.000"	"27.000"	"0.000239683340578145"	"25"	"0"	"0.0001296"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDVPPPK"	"[R].eDVPPPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9R066"	"Coxsackievirus and adenovirus receptor homolog OS=Rattus norvegicus OX=10116 GN=Cxadr PE=1 SV=2"	"Q9R066"	"Coxsackievirus and adenovirus receptor homolog OS=Rattus norvegicus OX=10116 GN=Cxadr PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"620.37085"	"1239.73442"	"1239.73491"	"-0.39"	"-0.00024"	"5/50"	"5"	"50"	"685379.391967773"	"HCD"	"MS2"	"53.12067"	"53.1"	"100.000"	"38.9076"	"10825"	"10825"	"10796"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.7"	""	"57.3"	""	"71.1"	""	"87.1"	"1.1"	"110.1"	"111.1"	""	"351"	"20"	"32.000"	"25.000"	"0.159322503046271"	"18"	"0.005874"	"0.06552"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDVPPPK"	"[R].eDVPPPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9R066"	"Coxsackievirus and adenovirus receptor homolog OS=Rattus norvegicus OX=10116 GN=Cxadr PE=1 SV=2"	"Q9R066"	"Coxsackievirus and adenovirus receptor homolog OS=Rattus norvegicus OX=10116 GN=Cxadr PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"620.37103"	"1239.73479"	"1239.73491"	"-0.10"	"-0.00006"	"5/50"	"5"	"50"	"567840.338745117"	"HCD"	"MS2"	"14.40897"	"52.8"	"100.000"	"39.5202"	"11065"	"11065"	"11038"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.2"	""	"55.9"	""	"63.0"	""	"88.8"	"0.7"	"122.9"	"106.0"	""	"350"	"18"	"32.000"	"25.000"	"0.266095817703187"	"14"	"0.007602"	"0.09022"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDETTADGR"	"[K].fDETTADGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55053"	"Fatty acid-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Fabp5 PE=1 SV=3"	"P55053"	"Fatty acid-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Fabp5 PE=1 SV=3"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"620.80383"	"1240.60039"	"1240.60071"	"-0.26"	"-0.00016"	"8/74"	"8"	"74"	"2132262.58099365"	"HCD"	"MS2"	"21.92338"	"131.3"	"100.000"	"36.2337"	"9741"	"9741"	"9720"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"136.5"	""	"139.9"	""	"161.6"	""	"259.9"	""	"249.8"	"303.3"	""	"380"	"29"	"32.000"	"25.000"	"0.0219156118986008"	"18"	"0"	"0.001334"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDETTADGR"	"[K].fDETTADGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55053"	"Fatty acid-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Fabp5 PE=1 SV=3"	"P55053"	"Fatty acid-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Fabp5 PE=1 SV=3"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"620.80383"	"1240.60039"	"1240.60071"	"-0.26"	"-0.00016"	"11/74"	"11"	"74"	"4913602.92651367"	"HCD"	"MS2"	"16.37078"	"264.8"	"100.000"	"36.5048"	"9851"	"9851"	"9839"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"272.8"	""	"246.6"	""	"328.2"	""	"522.4"	""	"529.6"	"621.1"	""	"380"	"27"	"32.000"	"25.000"	"0.0340215112266706"	"17"	"0"	"0.001599"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDETTADGR"	"[K].fDETTADGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55053"	"Fatty acid-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Fabp5 PE=1 SV=3"	"P55053"	"Fatty acid-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Fabp5 PE=1 SV=3"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"620.80420"	"1240.60112"	"1240.60071"	"0.33"	"0.00021"	"6/74"	"6"	"74"	"3139104.91485596"	"HCD"	"MS2"	"14.25681"	"180.4"	"100.000"	"36.7079"	"9927"	"9927"	"9912"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"187.9"	""	"185.1"	""	"209.3"	""	"348.0"	""	"372.8"	"415.1"	""	"401"	"27"	"33.000"	"26.000"	"0.0426691878719534"	"21"	"0"	"0.00123"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDETTADGR"	"[K].fDETTADGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55053"	"Fatty acid-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Fabp5 PE=1 SV=3"	"P55053"	"Fatty acid-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Fabp5 PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"620.80426"	"1240.60124"	"1240.60071"	"0.43"	"0.00027"	"11/74"	"11"	"74"	"2626929.77435303"	"HCD"	"MS2"	"8.388553"	"142.9"	"100.000"	"36.4185"	"9809"	"9809"	"9792"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"152.7"	""	"156.0"	""	"181.6"	""	"261.0"	""	"281.4"	"327.7"	""	"399"	"30"	"32.000"	"26.000"	"0.0201345950772299"	"17"	"0"	"0.001703"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDEWFATR"	"[K].sDEWFATR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"620.81085"	"1240.61443"	"1240.61597"	"-1.24"	"-0.00077"	"6/68"	"6"	"68"	"1432163.50891113"	"HCD"	"MS2"	"0"	"73.9"	"100.000"	"63.6438"	"20858"	"20858"	"20843"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"93.1"	""	"68.2"	""	"87.6"	""	"128.7"	"0.5"	"154.1"	"170.5"	""	"425"	"34"	"33.000"	"26.000"	"0.00794985000078114"	"23"	"0.0001301"	"0.004042"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDEWFATR"	"[K].sDEWFATR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"620.81122"	"1240.61516"	"1240.61597"	"-0.65"	"-0.00040"	"6/68"	"6"	"68"	"2773174.04730225"	"HCD"	"MS2"	"0"	"131.6"	"100.000"	"63.4933"	"20782"	"20782"	"20763"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"148.3"	""	"137.2"	""	"148.7"	""	"253.5"	""	"283.4"	"281.1"	""	"431"	"42"	"33.000"	"26.000"	"0.00133182534229828"	"25"	"0"	"0.002742"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDEWFATR"	"[K].sDEWFATR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"620.81140"	"1240.61553"	"1240.61597"	"-0.36"	"-0.00022"	"7/68"	"7"	"68"	"2434297.81054688"	"HCD"	"MS2"	"0"	"114.0"	"100.000"	"63.3424"	"20735"	"20735"	"20719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"131.8"	""	"125.6"	""	"146.2"	""	"208.7"	""	"228.6"	"250.8"	""	"432"	"30"	"33.000"	"26.000"	"0.0196994341300877"	"24"	"0.0006732"	"0.008618"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDEWFATR"	"[K].sDEWFATR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"620.81152"	"1240.61577"	"1240.61597"	"-0.16"	"-0.00010"	"5/68"	"5"	"68"	"990685.186401367"	"HCD"	"MS2"	"5.452278"	"55.5"	"100.000"	"63.7975"	"20906"	"20906"	"20888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.7"	""	"63.1"	""	"60.8"	""	"103.6"	""	"123.7"	"113.1"	""	"437"	"31"	"33.000"	"26.000"	"0.0192952958241456"	"22"	"0.0001301"	"0.004119"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHPDAWTR"	"[K].eHPDAWTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"414.21310"	"1240.62476"	"1240.62720"	"-1.97"	"-0.00081"	"6/68"	"6"	"68"	"4422479.16497803"	"HCD"	"MS2"	"5.14884"	"106.7"	"100.000"	"26.9845"	"5994"	"5994"	"5979"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"157.8"	""	"131.0"	""	"146.6"	""	"168.2"	"0.2"	"211.5"	"196.4"	""	"489"	"29"	"33.000"	"26.000"	"0.0332107637690559"	"21"	"0.004942"	"0.05303"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHPDAWTR"	"[K].eHPDAWTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"414.21335"	"1240.62549"	"1240.62720"	"-1.38"	"-0.00057"	"6/68"	"6"	"68"	"4555959.4911499"	"HCD"	"MS2"	"9.284392"	"109.7"	"100.000"	"27.0676"	"6012"	"6012"	"5993"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"166.4"	""	"142.8"	""	"147.1"	""	"171.8"	"0.0"	"213.7"	"197.9"	""	"482"	"27"	"33.000"	"26.000"	"0.0517627144265459"	"20"	"0.005874"	"0.06564"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAFAEFVR"	"[R].dGAFAEFVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8CG09"	"Multidrug resistance-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Abcc1 PE=1 SV=2"	"Q8CG09"	"Multidrug resistance-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Abcc1 PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"620.82959"	"1240.65190"	"1240.65235"	"-0.36"	"-0.00022"	"6/74"	"6"	"74"	"243517.544677734"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"79.7282"	"27374"	"27374"	"27360"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.2"	""	"23.7"	""	"20.7"	""	"28.3"	""	"35.4"	"33.4"	""	"567"	"24"	"34.000"	"27.000"	"0.108530814730319"	"19"	"0.004069"	"0.04473"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAFAEFVR"	"[R].dGAFAEFVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8CG09"	"Multidrug resistance-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Abcc1 PE=1 SV=2"	"Q8CG09"	"Multidrug resistance-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Abcc1 PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"620.82990"	"1240.65251"	"1240.65235"	"0.13"	"0.00008"	"6/74"	"6"	"74"	"242673.020629883"	"HCD"	"MS2"	"23.63667"	"16.9"	"100.000"	"79.6610"	"27343"	"27343"	"27328"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.3"	""	"19.8"	""	"22.8"	""	"29.3"	""	"32.8"	"35.9"	""	"563"	"32"	"34.000"	"27.000"	"0.0172376635270523"	"18"	"0"	"0.001318"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQTSEFIR"	"[K].mQTSEFIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"620.83093"	"1240.65459"	"1240.65572"	"-0.92"	"-0.00057"	"6/72"	"6"	"72"	"898281.014709473"	"HCD"	"MS2"	"31.74351"	"53.7"	"100.000"	"58.0309"	"18595"	"18595"	"18575"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.3"	""	"64.0"	""	"60.5"	""	"76.6"	""	"129.2"	"128.9"	""	"578"	"25"	"34.000"	"27.000"	"0.0930888880680912"	"19"	"0.003189"	"0.03203"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQTSEFIR"	"[K].mQTSEFIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"620.83142"	"1240.65557"	"1240.65572"	"-0.13"	"-0.00008"	"7/72"	"7"	"72"	"928543.132324219"	"HCD"	"MS2"	"43.40111"	"57.1"	"100.000"	"57.8444"	"18534"	"18534"	"18511"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.1"	""	"69.9"	""	"65.8"	""	"89.5"	""	"128.8"	"123.4"	""	"570"	"21"	"34.000"	"27.000"	"0.227952762677003"	"20"	"0.0002479"	"0.00584"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGQYTDK"	"[K].aGQYTDk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"620.84985"	"1240.69243"	"1240.69377"	"-1.08"	"-0.00067"	"6/58"	"6"	"58"	"8120778.612854"	"HCD"	"MS2"	"0"	"640.7"	"100.000"	"32.3890"	"8183"	"8183"	"8164"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1375.8"	""	"850.8"	""	"588.8"	""	"1109.6"	""	"1051.6"	"1081.3"	""	"518"	"30"	"34.000"	"27.000"	"0.028138423651682"	"21"	"0.006769"	"0.07865"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGQYTDK"	"[K].aGQYTDk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"620.84998"	"1240.69267"	"1240.69377"	"-0.89"	"-0.00055"	"6/58"	"6"	"58"	"8010236.55480957"	"HCD"	"MS2"	"2.927304"	"609.5"	"100.000"	"32.4168"	"8188"	"8188"	"8170"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1322.8"	""	"795.9"	""	"581.8"	""	"1024.2"	""	"998.4"	"1042.6"	""	"536"	"30"	"34.000"	"27.000"	"0.0291162067129373"	"21"	"0.006254"	"0.07089"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASGGDYWR"	"[K].tASGGDYWR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"621.30890"	"1241.61052"	"1241.61122"	"-0.56"	"-0.00035"	"7/74"	"7"	"74"	"1876226.79144287"	"HCD"	"MS2"	"19.04349"	"121.3"	"100.000"	"42.4317"	"12249"	"12249"	"12229"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"188.4"	""	"152.3"	""	"144.8"	""	"197.0"	""	"229.3"	"241.6"	""	"367"	"25"	"32.000"	"25.000"	"0.0599288672036236"	"20"	"0"	"0.0008985"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASGGDYWR"	"[K].tASGGDYWR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"621.30902"	"1241.61077"	"1241.61122"	"-0.36"	"-0.00023"	"7/74"	"7"	"74"	"1933207.67303467"	"HCD"	"MS2"	"26.58881"	"130.4"	"100.000"	"42.3116"	"12211"	"12211"	"12188"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"204.3"	""	"155.1"	""	"159.2"	""	"199.7"	""	"255.7"	"265.0"	""	"368"	"25"	"32.000"	"25.000"	"0.0580520850700931"	"20"	"0"	"0.001465"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGDPGDDPR"	"[R].lAGDPGDDPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VD52"	"Pyridoxal phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pdxp PE=1 SV=2"	"Q8VD52"	"Pyridoxal phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pdxp PE=1 SV=2"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"621.31995"	"1241.63262"	"1241.63235"	"0.22"	"0.00014"	"5/80"	"5"	"80"	"858046.612182617"	"HCD"	"MS2"	"0"	"47.1"	"100.000"	"34.9639"	"9225"	"9225"	"9194"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.8"	""	"56.5"	""	"78.3"	""	"76.5"	""	"93.3"	"72.9"	""	"429"	"39"	"33.000"	"26.000"	"0.0024970503330855"	"25"	"0.0008629"	"0.009869"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGDPGDDPR"	"[R].lAGDPGDDPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VD52"	"Pyridoxal phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pdxp PE=1 SV=2"	"Q8VD52"	"Pyridoxal phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pdxp PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"621.31995"	"1241.63262"	"1241.63235"	"0.22"	"0.00014"	"5/80"	"5"	"80"	"830953.71862793"	"HCD"	"MS2"	"0"	"45.9"	"100.000"	"35.0482"	"9254"	"9254"	"9227"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.0"	""	"57.8"	""	"66.5"	""	"82.4"	""	"89.1"	"80.2"	""	"429"	"35"	"33.000"	"26.000"	"0.00627230685047395"	"24"	"0.0008629"	"0.01083"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YETELAMR"	"[K].yETELAMR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"621.32349"	"1241.63970"	"1241.63974"	"-0.03"	"-0.00002"	"10/60"	"10"	"60"	"2681967.05065918"	"HCD"	"MS2"	"52.81217"	"129.2"	"100.000"	"55.3500"	"17517"	"17517"	"17495"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"166.6"	""	"144.5"	""	"165.8"	""	"197.8"	""	"271.1"	"283.6"	""	"476"	"22"	"33.000"	"26.000"	"0.168103577914585"	""	"0.000936"	"0.01178"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YETELAMR"	"[K].yETELAMR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"621.32373"	"1241.64018"	"1241.63974"	"0.36"	"0.00022"	"6/60"	"6"	"60"	"3138149.57635498"	"HCD"	"MS2"	"33.79079"	"153.6"	"100.000"	"55.6006"	"17605"	"17605"	"17586"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"208.6"	""	"166.1"	""	"201.0"	""	"235.4"	""	"313.1"	"336.4"	""	"485"	"30"	"33.000"	"26.000"	"0.0245308017658026"	""	"0.0004639"	"0.00748"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIDEHDAII"	"[R].sIDEHDAII.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZB0"	"Porimin OS=Rattus norvegicus OX=10116 GN=Tmem123 PE=2 SV=1"	"Q5HZB0"	"Porimin OS=Rattus norvegicus OX=10116 GN=Tmem123 PE=2 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"621.33179"	"1241.65630"	"1241.65750"	"-0.97"	"-0.00060"	"4/76"	"4"	"76"	"492500.085021973"	"HCD"	"MS2"	"13.49066"	"14.5"	"100.000"	"65.9892"	"21793"	"21793"	"21769"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.6"	""	"14.4"	""	"13.3"	""	"27.3"	""	"25.3"	"35.5"	""	"505"	"23"	"34.000"	"27.000"	"0.121972347515043"	"17"	"0.002379"	"0.02469"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISNAEPEPR"	"[R].iSNAEPEPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNF1"	"Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B0BNF1"	"Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"621.33698"	"1241.66667"	"1241.66873"	"-1.66"	"-0.00103"	"7/86"	"7"	"86"	"1247129.63873291"	"HCD"	"MS2"	"0"	"72.0"	"100.000"	"32.2217"	"8109"	"8109"	"8084"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"84.5"	""	"68.2"	""	"187.0"	""	"101.9"	""	"125.2"	"118.0"	""	"523"	"43"	"34.000"	"27.000"	"0.00125739489619604"	"21"	"0"	"0.001562"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEGYSEK"	"[K].aEGYSEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q923V4"	"F-box only protein 6 OS=Rattus norvegicus OX=10116 GN=Fbxo6 PE=1 SV=1"	"Q923V4"	"F-box only protein 6 OS=Rattus norvegicus OX=10116 GN=Fbxo6 PE=1 SV=1"	"0"	"2"	"2"	"0.2308"	"0.0000"	"1"	"1"	"1"	"621.34131"	"1241.67534"	"1241.67779"	"-1.97"	"-0.00122"	"10/56"	"10"	"56"	"2500555.18841553"	"HCD"	"MS2"	"7.460934"	"192.9"	"100.000"	"31.5140"	"7829"	"7829"	"7804"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"253.0"	""	"174.1"	""	"561.0"	""	"230.5"	""	"302.0"	"302.2"	""	"531"	"26"	"34.000"	"27.000"	"0.0605430820116111"	""	"0.006685"	"0.07457"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEGYSEK"	"[K].aEGYSEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q923V4"	"F-box only protein 6 OS=Rattus norvegicus OX=10116 GN=Fbxo6 PE=1 SV=1"	"Q923V4"	"F-box only protein 6 OS=Rattus norvegicus OX=10116 GN=Fbxo6 PE=1 SV=1"	"0"	"2"	"2"	"0.2400"	"0.0000"	"1"	"1"	"1"	"621.34180"	"1241.67632"	"1241.67779"	"-1.19"	"-0.00074"	"10/56"	"10"	"56"	"2390255.85528564"	"HCD"	"MS2"	"24.23946"	"189.5"	"100.000"	"31.5421"	"7831"	"7831"	"7805"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"249.8"	""	"180.5"	""	"540.2"	""	"225.0"	"1.1"	"312.7"	"279.9"	""	"523"	"25"	"34.000"	"27.000"	"0.0804399317054695"	""	"0.004606"	"0.04977"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPGNPVNSAR"	"[K].tPGNPVNSAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99JD4"	"CLIP-associating protein 2 OS=Rattus norvegicus OX=10116 GN=Clasp2 PE=1 SV=1"	"Q99JD4"	"CLIP-associating protein 2 OS=Rattus norvegicus OX=10116 GN=Clasp2 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"621.34320"	"1241.67912"	"1241.67996"	"-0.68"	"-0.00042"	"4/98"	"4"	"98"	"429847.701965332"	"HCD"	"MS2"	"14.16567"	"31.1"	"100.000"	"27.6366"	"6243"	"6243"	"6217"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.4"	""	"35.0"	""	"44.6"	""	"52.7"	""	"68.0"	"56.4"	""	"511"	"22"	"34.000"	"27.000"	"0.180049079121106"	"18"	"0.008837"	"0.1148"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPGNPVNSAR"	"[K].tPGNPVNSAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99JD4"	"CLIP-associating protein 2 OS=Rattus norvegicus OX=10116 GN=Clasp2 PE=1 SV=1"	"Q99JD4"	"CLIP-associating protein 2 OS=Rattus norvegicus OX=10116 GN=Clasp2 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"621.34424"	"1241.68120"	"1241.67996"	"0.99"	"0.00062"	"8/98"	"8"	"98"	"1026759.56768799"	"HCD"	"MS2"	"0"	"51.8"	"100.000"	"27.3260"	"6132"	"6132"	"6107"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"73.5"	""	"57.3"	""	"76.1"	""	"96.1"	""	"91.3"	"99.8"	""	"532"	"30"	"34.000"	"27.000"	"0.027661876411053"	"17"	"0"	"0.001703"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGDLMAYDR"	"[R].gGDLmAYDR.[R]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"621.80225"	"1242.59722"	"1242.59860"	"-1.12"	"-0.00069"	"8/74"	"8"	"74"	"1755221.41107178"	"HCD"	"MS2"	"4.750343"	"81.9"	"100.000"	"38.2544"	"10558"	"10558"	"10536"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"115.4"	""	"89.6"	""	"98.8"	""	"186.4"	""	"152.5"	"132.9"	""	"312"	"50"	"31.000"	"24.000"	"0.000143921142636143"	"21"	"0"	"0.002387"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGDLMAYDR"	"[R].gGDLmAYDR.[R]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"621.80243"	"1242.59758"	"1242.59860"	"-0.82"	"-0.00051"	"7/74"	"7"	"74"	"2064853.00048828"	"HCD"	"MS2"	"9.479051"	"94.5"	"100.000"	"38.5488"	"10678"	"10678"	"10657"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"122.3"	""	"109.6"	""	"120.5"	""	"199.5"	""	"183.5"	"160.3"	""	"318"	"29"	"32.000"	"25.000"	"0.0196968657258329"	"21"	"0.001211"	"0.0147"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGDLMAYDR"	"[R].gGDLmAYDR.[R]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"621.80261"	"1242.59795"	"1242.59860"	"-0.53"	"-0.00033"	"8/74"	"8"	"74"	"2380322.86138916"	"HCD"	"MS2"	"12.24333"	"113.1"	"100.000"	"38.6971"	"10729"	"10729"	"10715"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"158.6"	""	"133.2"	""	"139.6"	""	"236.2"	"0.8"	"217.4"	"186.0"	""	"328"	"33"	"32.000"	"25.000"	"0.00878706518321881"	"18"	"0.0004639"	"0.007567"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGDLMAYDR"	"[R].gGDLmAYDR.[R]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.5143"	"0.0000"	"1"	"1"	"1"	"621.80347"	"1242.59966"	"1242.59860"	"0.85"	"0.00053"	"6/74"	"6"	"74"	"1086222.20123291"	"HCD"	"MS2"	"17.7561"	"59.6"	"100.000"	"38.3863"	"10604"	"10604"	"10578"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.6"	""	"65.4"	""	"77.3"	""	"129.0"	"1.3"	"109.9"	"105.6"	""	"349"	"35"	"32.000"	"25.000"	"0.00531857675690084"	""	"0.0005778"	"0.008076"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNFGFGDSR"	"[R].gGNFGFGDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"621.80658"	"1242.60588"	"1242.60647"	"-0.47"	"-0.00029"	"9/88"	"9"	"88"	"3529651.34667969"	"HCD"	"MS2"	"0"	"180.7"	"100.000"	"49.8049"	"15258"	"15258"	"15238"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"266.6"	""	"165.0"	""	"139.7"	""	"369.1"	"1.6"	"381.5"	"394.0"	""	"361"	"41"	"32.000"	"25.000"	"0.00128078787117392"	"23"	"0"	"5.669E-05"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNFGFGDSR"	"[R].gGNFGFGDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"621.80688"	"1242.60649"	"1242.60647"	"0.02"	"0.00001"	"8/88"	"8"	"88"	"3747490.85058594"	"HCD"	"MS2"	"0"	"184.7"	"100.000"	"50.1578"	"15391"	"15391"	"15374"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"259.6"	""	"160.5"	""	"162.9"	""	"376.7"	""	"394.8"	"405.0"	""	"361"	"45"	"32.000"	"25.000"	"0.000543847587365595"	"22"	"0"	"9.614E-05"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGPGFYTTR"	"[K].dGPGFYTTR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"621.81927"	"1242.63127"	"1242.63162"	"-0.28"	"-0.00017"	"7/78"	"7"	"78"	"2248028.93994141"	"HCD"	"MS2"	"15.30976"	"115.9"	"100.000"	"43.3439"	"12633"	"12633"	"12607"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"195.0"	""	"160.1"	""	"142.3"	""	"189.1"	"0.7"	"207.9"	"202.5"	""	"429"	"33"	"33.000"	"26.000"	"0.0109755753723396"	"21"	"0"	"0.0008183"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGPGFYTTR"	"[K].dGPGFYTTR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"621.82001"	"1242.63274"	"1242.63162"	"0.90"	"0.00056"	"6/78"	"6"	"78"	"2365922.19128418"	"HCD"	"MS2"	"13.52204"	"120.4"	"100.000"	"43.4685"	"12673"	"12673"	"12650"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"197.6"	""	"150.5"	""	"168.1"	""	"195.2"	"0.9"	"212.4"	"215.0"	""	"432"	"32"	"33.000"	"26.000"	"0.0133799272216585"	"21"	"0"	"0.0006502"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILDEAPLR"	"[R].sILDEAPLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62835"	"Rab GTPase-binding effector protein 2 OS=Rattus norvegicus OX=10116 GN=Rabep2 PE=1 SV=1"	"Q62835"	"Rab GTPase-binding effector protein 2 OS=Rattus norvegicus OX=10116 GN=Rabep2 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"621.86597"	"1242.72466"	"1242.72552"	"-0.69"	"-0.00043"	"11/72"	"11"	"72"	"1796430.67706299"	"HCD"	"MS2"	"45.94414"	"68.0"	"100.000"	"75.7389"	"25767"	"25767"	"25748"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"138.7"	""	"113.2"	""	"84.3"	""	"100.2"	""	"92.6"	"113.5"	""	"482"	"17"	"33.000"	"26.000"	"0.527250551371842"	"17"	"0.0003538"	"0.007114"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNFGFGDSR"	"[R].gGnFGFGDSR.[G]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.29810"	"1243.58891"	"1243.59048"	"-1.26"	"-0.00078"	"8/88"	"8"	"88"	"1002700.47296143"	"HCD"	"MS2"	"47.14008"	"58.5"	"100.000"	"59.5850"	"19230"	"19230"	"19206"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"70.0"	""	"55.8"	""	"55.6"	""	"115.4"	""	"131.1"	"133.6"	""	"252"	"20"	"31.000"	"24.000"	"0.115178268425252"	"14"	"0"	"0.001416"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNFGFGDSR"	"[R].gGnFGFGDSR.[G]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"622.29840"	"1243.58953"	"1243.59048"	"-0.77"	"-0.00048"	"8/88"	"8"	"88"	"1155608.7522583"	"HCD"	"MS2"	"48.14063"	"67.7"	"100.000"	"59.3852"	"19163"	"19163"	"19142"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"84.9"	""	"71.3"	""	"77.6"	""	"126.1"	""	"142.1"	"145.9"	""	"253"	"20"	"31.000"	"24.000"	"0.122769510856554"	"16"	"0"	"0.001142"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNYDEGFGR"	"[K].gNYDEGFGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM31"	"LIM domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Limd2 PE=2 SV=1"	"Q4KM31"	"LIM domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Limd2 PE=2 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"622.29840"	"1243.58953"	"1243.59048"	"-0.77"	"-0.00048"	"7/80"	"7"	"80"	"1493634.80914307"	"HCD"	"MS2"	"44.17623"	"108.9"	"100.000"	"40.5906"	"11511"	"11511"	"11491"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"170.0"	""	"138.6"	""	"135.3"	""	"169.9"	"8.9"	"214.5"	"195.4"	""	"253"	"12"	"31.000"	"24.000"	"0.81113011438023"	"19"	"0"	"0.00219"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNYDEGFGR"	"[K].gNYDEGFGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM31"	"LIM domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Limd2 PE=2 SV=1"	"Q4KM31"	"LIM domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Limd2 PE=2 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"622.29871"	"1243.59014"	"1243.59048"	"-0.28"	"-0.00017"	"6/80"	"6"	"80"	"1395694.10888672"	"HCD"	"MS2"	"48.29551"	"106.1"	"100.000"	"40.7797"	"11578"	"11578"	"11557"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"164.3"	""	"137.5"	""	"135.4"	""	"158.1"	"3.6"	"203.9"	"203.3"	""	"254"	"16"	"31.000"	"24.000"	"0.334044034970713"	"19"	"0"	"0.003047"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLmk.[I]"	"M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"622.32495"	"1243.64263"	"1243.64416"	"-1.23"	"-0.00077"	"6/62"	"6"	"62"	"371500.817749023"	"HCD"	"MS2"	"27.56105"	"12.5"	"100.000"	"86.3855"	"30017"	"30017"	"29993"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.9"	""	"12.6"	""	"16.5"	""	"27.7"	""	"22.3"	"25.3"	""	"489"	"42"	"33.000"	"26.000"	"0.00146986978814661"	"17"	"0.002937"	"0.02802"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLmk.[I]"	"M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"622.32544"	"1243.64360"	"1243.64416"	"-0.45"	"-0.00028"	"6/62"	"6"	"62"	"662689.362731934"	"HCD"	"MS2"	"0"	"16.5"	"100.000"	"86.9120"	"30220"	"30220"	"30205"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.3"	""	"15.3"	""	"16.3"	""	"43.7"	""	"31.6"	"31.6"	""	"505"	"46"	"34.000"	"27.000"	"0.000674934118187487"	"23"	"0.00263"	"0.0257"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLmk.[I]"	"M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"622.32550"	"1243.64372"	"1243.64416"	"-0.35"	"-0.00022"	"6/62"	"6"	"62"	"511334.945739746"	"HCD"	"MS2"	"6.397002"	"14.8"	"100.000"	"86.6272"	"30107"	"30107"	"30095"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.1"	""	"17.9"	""	"13.3"	""	"36.3"	""	"23.4"	"31.2"	""	"505"	"43"	"34.000"	"27.000"	"0.00134977500747735"	"18"	"0.001886"	"0.02174"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLmk.[I]"	"M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"622.32568"	"1243.64409"	"1243.64416"	"-0.05"	"-0.00003"	"6/62"	"6"	"62"	"557911.325683594"	"HCD"	"MS2"	"0"	"14.6"	"100.000"	"86.6593"	"30122"	"30122"	"30113"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.7"	""	"15.9"	""	"13.0"	""	"39.5"	""	"26.3"	"29.2"	""	"501"	"49"	"33.000"	"26.000"	"0.000314635505905567"	"21"	"0.003581"	"0.03735"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLmk.[I]"	"M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"622.32581"	"1243.64433"	"1243.64416"	"0.14"	"0.00009"	"6/62"	"6"	"62"	"622607.998291016"	"HCD"	"MS2"	"3.057133"	"15.8"	"100.000"	"86.9327"	"30232"	"30232"	"30218"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.7"	""	"13.7"	""	"19.2"	""	"45.6"	""	"28.0"	"26.5"	""	"501"	"43"	"33.000"	"26.000"	"0.00136084208038855"	"21"	"0.001978"	"0.02202"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLmk.[I]"	"M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"622.32593"	"1243.64458"	"1243.64416"	"0.34"	"0.00021"	"5/62"	"5"	"62"	"310961.148620605"	"HCD"	"MS2"	"40.42878"	"11.2"	"100.000"	"86.3462"	"29998"	"29998"	"29977"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.3"	""	"11.7"	""	"15.0"	""	"26.6"	""	"17.6"	"24.9"	""	"501"	"37"	"33.000"	"26.000"	"0.00506766304258908"	"25"	"0.006834"	"0.0796"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDTDGSK"	"[K].yDTDGSk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"622.33142"	"1243.65557"	"1243.65705"	"-1.20"	"-0.00074"	"6/56"	"6"	"56"	"5587884.8182373"	"HCD"	"MS2"	"53.30436"	"409.5"	"100.000"	"31.7347"	"7919"	"7919"	"7897"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"637.4"	""	"440.1"	""	"544.8"	""	"631.0"	""	"818.4"	"816.2"	""	"529"	"14"	"34.000"	"27.000"	"1.05057164834667"	"18"	"0.008052"	"0.09807"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDTDGSK"	"[K].yDTDGSk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"622.33191"	"1243.65654"	"1243.65705"	"-0.41"	"-0.00026"	"10/56"	"10"	"56"	"5711706.69238281"	"HCD"	"MS2"	"44.67594"	"452.9"	"100.000"	"31.7973"	"7935"	"7935"	"7913"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"686.6"	""	"493.6"	""	"593.6"	""	"672.4"	""	"957.8"	"901.2"	""	"528"	"16"	"34.000"	"27.000"	"0.718793145332569"	"18"	"0.005921"	"0.06754"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMPDPITAR"	"[K].nMPDPITAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O88350"	"Putative hydrolase RBBP9 OS=Rattus norvegicus OX=10116 GN=Rbbp9 PE=1 SV=2"	"O88350"	"Putative hydrolase RBBP9 OS=Rattus norvegicus OX=10116 GN=Rbbp9 PE=1 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"622.33636"	"1243.66545"	"1243.66662"	"-0.94"	"-0.00058"	"11/86"	"11"	"86"	"3058515.04486084"	"HCD"	"MS2"	"0"	"115.3"	"100.000"	"53.3543"	"16694"	"16694"	"16674"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"189.4"	""	"179.4"	""	"182.9"	""	"115.4"	""	"215.1"	"210.3"	""	"585"	"33"	"34.000"	"27.000"	"0.0141620417518349"	"20"	"0"	"0.0006303"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMPDPITAR"	"[K].nMPDPITAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O88350"	"Putative hydrolase RBBP9 OS=Rattus norvegicus OX=10116 GN=Rbbp9 PE=1 SV=2"	"O88350"	"Putative hydrolase RBBP9 OS=Rattus norvegicus OX=10116 GN=Rbbp9 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"622.33667"	"1243.66606"	"1243.66662"	"-0.45"	"-0.00028"	"6/86"	"6"	"86"	"2957632.83538818"	"HCD"	"MS2"	"0"	"112.2"	"100.000"	"53.0863"	"16596"	"16596"	"16577"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"178.3"	""	"179.1"	""	"177.8"	""	"128.3"	""	"202.7"	"202.6"	""	"587"	"36"	"34.000"	"27.000"	"0.00752676064717951"	"21"	"0"	"0.000996"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGYTTSK"	"[K].eGYTTSk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"622.34943"	"1243.69158"	"1243.69344"	"-1.50"	"-0.00093"	"6/58"	"6"	"58"	"2318721.94152832"	"HCD"	"MS2"	"38.71311"	"191.6"	"100.000"	"31.5851"	"7858"	"7858"	"7836"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"288.0"	""	"194.7"	""	"359.6"	""	"315.6"	""	"322.4"	"334.2"	""	"538"	"19"	"34.000"	"27.000"	"0.358717265251934"	"17"	"0.006129"	"0.06984"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQIDEQLR"	"[R].lQIDEQLR.[Q]"	"N-Term(TMT6plex)"	"1"	"2"	"Q80WE1"	"Synaptic functional regulator FMR1 OS=Rattus norvegicus OX=10116 GN=Fmr1 PE=1 SV=2"	"Q80WE1; Q5XI81"	"Synaptic functional regulator FMR1 OS=Rattus norvegicus OX=10116 GN=Fmr1 PE=1 SV=2; Fragile X mental retardation syndrome-related protein 1 OS=Rattus norvegicus OX=10116 GN=Fxr1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"622.36365"	"1243.72002"	"1243.72077"	"-0.60"	"-0.00037"	"6/70"	"6"	"70"	"999754.115661621"	"HCD"	"MS2"	"39.51919"	"52.2"	"100.000"	"64.8689"	"21353"	"21353"	"21326"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.7"	""	"52.7"	""	"60.7"	""	"99.8"	""	"98.3"	"105.0"	""	"561"	"28"	"34.000"	"27.000"	"0.0412033820879105"	"27"	"0.0002479"	"0.005578"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGMGTSVER"	"[R].yGmGTSVER.[A]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"622.80981"	"1244.61235"	"1244.61425"	"-1.53"	"-0.00095"	"10/70"	"10"	"70"	"1176428.75830078"	"HCD"	"MS2"	"0"	"65.5"	"100.000"	"27.0258"	"6011"	"6011"	"5991"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"82.4"	""	"74.6"	""	"86.2"	""	"138.0"	"1.4"	"121.8"	"115.9"	""	"378"	"34"	"32.000"	"25.000"	"0.00736990354818666"	"19"	"0.003581"	"0.0372"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVNTPNNR"	"[K].lSVNTPnNR.[Q]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"622.84357"	"1244.67986"	"1244.67963"	"0.18"	"0.00011"	"5/80"	"5"	"80"	"947095.798339844"	"HCD"	"MS2"	"12.58692"	"54.8"	"100.000"	"39.9059"	"11223"	"11223"	"11196"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"96.4"	""	"65.2"	""	"60.2"	""	"100.4"	""	"97.0"	"100.1"	""	"583"	"33"	"34.000"	"27.000"	"0.0159088416508105"	"20"	"0.001134"	"0.01387"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVNTPNNR"	"[K].lSVNTPnNR.[Q]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"622.84357"	"1244.67986"	"1244.67963"	"0.18"	"0.00011"	"6/80"	"6"	"80"	"889595.682495117"	"HCD"	"MS2"	"15.28488"	"53.8"	"100.000"	"39.7352"	"11162"	"11162"	"11140"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"88.6"	""	"68.7"	""	"59.9"	""	"99.2"	"0.1"	"92.9"	"100.1"	""	"583"	"44"	"34.000"	"27.000"	"0.00114192757176919"	"20"	"0.0003538"	"0.007316"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLSEPWR"	"[K].eVLSEPWR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"622.84418"	"1244.68108"	"1244.68365"	"-2.07"	"-0.00129"	"5/64"	"5"	"64"	"1192285.90905762"	"HCD"	"MS2"	"9.113335"	"63.4"	"100.000"	"70.0361"	"23457"	"23457"	"23437"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.7"	""	"96.1"	""	"85.8"	""	"103.6"	"0.8"	"119.3"	"119.8"	""	"642"	"30"	"35.000"	"28.000"	"0.033458389483525"	""	"0.000936"	"0.01329"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLSEPWR"	"[K].eVLSEPWR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"0"	"2"	"2"	"0.2571"	"0.0000"	"1"	"1"	"1"	"622.84430"	"1244.68132"	"1244.68365"	"-1.87"	"-0.00117"	"6/64"	"6"	"64"	"1020425.4586792"	"HCD"	"MS2"	"8.479694"	"52.7"	"100.000"	"70.2036"	"23511"	"23511"	"23493"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.2"	""	"77.1"	""	"75.4"	""	"85.9"	"2.3"	"100.7"	"89.5"	""	"648"	"35"	"35.000"	"28.000"	"0.00945246352536378"	""	"0.0008629"	"0.01033"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPEAPPSVR"	"[K].yPEAPPSVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"622.84515"	"1244.68303"	"1244.68365"	"-0.50"	"-0.00031"	"7/72"	"7"	"72"	"10903379.9859619"	"HCD"	"MS2"	"16.11241"	"331.1"	"100.000"	"45.9193"	"13663"	"13663"	"13645"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"525.8"	""	"451.6"	""	"487.8"	""	"493.1"	"1.2"	"527.3"	"646.2"	""	"645"	"28"	"35.000"	"28.000"	"0.0492640053781779"	"16"	"0.004022"	"0.04299"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPEAPPSVR"	"[K].yPEAPPSVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.84521"	"1244.68315"	"1244.68365"	"-0.40"	"-0.00025"	"6/72"	"6"	"72"	"12199479.6174316"	"HCD"	"MS2"	"14.74246"	"381.8"	"100.000"	"45.7697"	"13614"	"13614"	"13596"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"634.6"	""	"518.3"	""	"578.2"	""	"538.8"	"6.6"	"606.7"	"728.2"	""	"645"	"25"	"35.000"	"28.000"	"0.0978429906902653"	"14"	"0.005427"	"0.06188"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPEAPPSVR"	"[K].yPEAPPSVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.84528"	"1244.68328"	"1244.68365"	"-0.30"	"-0.00019"	"9/72"	"9"	"72"	"8682311.2456665"	"HCD"	"MS2"	"0"	"269.3"	"100.000"	"46.0715"	"13738"	"13738"	"13721"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"426.6"	""	"371.6"	""	"408.9"	""	"390.9"	"0.5"	"449.7"	"499.8"	""	"645"	"30"	"35.000"	"28.000"	"0.0349566429771839"	"14"	"0.001374"	"0.01649"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPEAPPSVR"	"[K].yPEAPPSVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.84534"	"1244.68340"	"1244.68365"	"-0.21"	"-0.00013"	"7/72"	"7"	"72"	"8218971.07641602"	"HCD"	"MS2"	"0"	"265.2"	"100.000"	"46.2324"	"13791"	"13791"	"13773"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"407.1"	""	"374.7"	""	"395.6"	""	"367.6"	"0.3"	"453.6"	"511.5"	""	"633"	"31"	"35.000"	"28.000"	"0.0250249785761945"	"14"	"0.000936"	"0.01185"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPEAPPSVR"	"[K].yPEAPPSVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.84546"	"1244.68364"	"1244.68365"	"-0.01"	"-0.00001"	"7/72"	"7"	"72"	"1533738.82269287"	"HCD"	"MS2"	"0"	"76.1"	"100.000"	"46.5403"	"13917"	"13917"	"13898"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"98.5"	""	"85.8"	""	"105.1"	""	"124.9"	"4.6"	"159.7"	"143.5"	""	"633"	"18"	"35.000"	"28.000"	"0.473558585153888"	"14"	"0.003967"	"0.04186"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPGSGPDK"	"[R].ePGSGPDk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q920H8"	"Hephaestin OS=Rattus norvegicus OX=10116 GN=Heph PE=1 SV=1"	"Q920H8"	"Hephaestin OS=Rattus norvegicus OX=10116 GN=Heph PE=1 SV=1"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"622.84796"	"1244.68865"	"1244.68869"	"-0.03"	"-0.00002"	"6/68"	"6"	"68"	"785216.223266602"	"HCD"	"MS2"	"18.79204"	"56.9"	"100.000"	"27.9097"	"6355"	"6355"	"6326"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.4"	""	"76.4"	""	"79.6"	""	"86.7"	""	"130.0"	"117.2"	""	"614"	"24"	"34.000"	"27.000"	"0.135250343096512"	"27"	"0.003922"	"0.03959"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVNSATGVPTV"	"[K].aVNSATGVPTV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"622.85529"	"1244.70329"	"1244.70478"	"-1.20"	"-0.00074"	"8/92"	"8"	"92"	"1731624.45300293"	"HCD"	"MS2"	"0"	"29.7"	"100.000"	"68.0461"	"22632"	"22632"	"22615"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.0"	""	"34.7"	""	"41.5"	""	"51.5"	""	"60.8"	"57.9"	""	"723"	"65"	"35.000"	"28.000"	"1.13529389283625E-05"	"22"	"0"	"0.0001914"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVNSATGVPTV"	"[K].aVNSATGVPTV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.9833"	"0.0000"	"1"	"1"	"1"	"622.85535"	"1244.70342"	"1244.70478"	"-1.10"	"-0.00068"	"8/92"	"8"	"92"	"1670422.059021"	"HCD"	"MS2"	"0"	"30.4"	"100.000"	"67.9244"	"22596"	"22596"	"22578"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.0"	""	"34.0"	""	"37.6"	""	"56.5"	"0.6"	"57.7"	"58.9"	""	"724"	"60"	"35.000"	"28.000"	"3.32436399927057E-05"	"17"	"0"	"0.0003966"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVNSATGVPTV"	"[K].aVNSATGVPTV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.85553"	"1244.70378"	"1244.70478"	"-0.80"	"-0.00050"	"8/92"	"8"	"92"	"3591963.3873291"	"HCD"	"MS2"	"0"	"50.8"	"100.000"	"67.6179"	"22473"	"22473"	"22456"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.0"	""	"65.4"	""	"71.4"	""	"88.1"	"0.1"	"97.8"	"95.8"	""	"721"	"60"	"35.000"	"28.000"	"3.22778997980629E-05"	"16"	"0"	"0.0001458"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEALGQEK"	"[R].QLEALGQEk.[L]"	"K9(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"622.85571"	"1244.70415"	"1244.70478"	"-0.51"	"-0.00032"	"6/90"	"6"	"90"	"1161612.77655029"	"HCD"	"MS2"	"33.66444"	"34.8"	"100.000"	"80.2748"	"27591"	"27591"	"27566"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.4"	""	"40.7"	""	"51.1"	""	"54.3"	""	"61.9"	"68.5"	""	"721"	"29"	"35.000"	"28.000"	"0.0434415456504033"	"18"	"0.00447"	"0.04761"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVNSATGVPTV"	"[K].aVNSATGVPTV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"622.85583"	"1244.70439"	"1244.70478"	"-0.31"	"-0.00019"	"8/92"	"8"	"92"	"3498906.03723145"	"HCD"	"MS2"	"0.585515"	"48.3"	"100.000"	"67.7487"	"22511"	"22511"	"22494"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.2"	""	"56.0"	""	"71.7"	""	"81.8"	""	"92.2"	"91.1"	""	"720"	"60"	"35.000"	"28.000"	"3.26815390864147E-05"	"20"	"0"	"0.0001407"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVNSATGVPTV"	"[K].aVNSATGVPTV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.9792"	"0.0000"	"1"	"1"	"1"	"622.85614"	"1244.70500"	"1244.70478"	"0.18"	"0.00011"	"8/92"	"8"	"92"	"225688.157714844"	"HCD"	"MS2"	"38.23251"	"14.5"	"100.000"	"68.2543"	"22731"	"22731"	"22703"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.3"	""	"19.9"	""	"24.3"	""	"24.9"	""	"21.0"	"30.5"	""	"695"	"48"	"35.000"	"28.000"	"0.000549483693646458"	"17"	"0"	"0.0004205"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVAAQEAAR"	"[R].lSVAAQEAAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"622.86066"	"1244.71404"	"1244.71602"	"-1.59"	"-0.00099"	"8/90"	"8"	"90"	"3296328.30474854"	"HCD"	"MS2"	"37.61532"	"164.7"	"100.000"	"44.0182"	"12905"	"12905"	"12881"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"259.5"	""	"235.4"	""	"254.0"	""	"221.4"	""	"287.6"	"305.3"	""	"716"	"55"	"35.000"	"28.000"	"0.00011800027695953"	"21"	"0"	"5.826E-05"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTGVQNLR"	"[R].dLTGVQNLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"622.86108"	"1244.71489"	"1244.71602"	"-0.90"	"-0.00056"	"6/74"	"6"	"74"	"1606685.34509277"	"HCD"	"MS2"	"0"	"77.4"	"100.000"	"55.6471"	"17638"	"17638"	"17621"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"109.0"	""	"98.7"	""	"93.5"	""	"113.3"	""	"129.9"	"191.6"	""	"719"	"41"	"35.000"	"28.000"	"0.00316737069846381"	"27"	"0"	"0.0007783"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVAAQEAAR"	"[R].lSVAAQEAAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9455"	"0.0000"	"1"	"1"	"1"	"622.86108"	"1244.71489"	"1244.71602"	"-0.90"	"-0.00056"	"8/90"	"8"	"90"	"3205658.8604126"	"HCD"	"MS2"	"40.60722"	"154.9"	"100.000"	"44.1520"	"12949"	"12949"	"12923"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"228.8"	""	"224.3"	""	"248.1"	""	"208.0"	""	"268.4"	"293.1"	""	"719"	"55"	"35.000"	"28.000"	"0.000116064363675569"	"19"	"0"	"4.689E-05"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.7551"	"0.0000"	"1"	"1"	"1"	"415.57648"	"1244.71488"	"1244.71602"	"-0.91"	"-0.00038"	"13/82"	"13"	"82"	"2908031.8381958"	"HCD"	"MS2"	"8.589232"	"54.9"	"100.000"	"48.5264"	"14737"	"14737"	"14719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.2"	""	"79.2"	""	"80.4"	""	"84.1"	""	"108.6"	"105.7"	""	"719"	"49"	"35.000"	"28.000"	"0.000468488456853601"	"27"	"0"	"0.0004554"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.6957"	"0.0000"	"1"	"1"	"1"	"415.57654"	"1244.71506"	"1244.71602"	"-0.77"	"-0.00032"	"7/82"	"7"	"82"	"2280310.0357666"	"HCD"	"MS2"	"34.35353"	"50.3"	"100.000"	"48.2318"	"14617"	"14617"	"14594"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.8"	""	"62.0"	""	"78.3"	""	"79.9"	""	"94.6"	"103.0"	""	"719"	"46"	"35.000"	"28.000"	"0.00081978297488415"	""	"0"	"0.0004101"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"622.86121"	"1244.71514"	"1244.71602"	"-0.71"	"-0.00044"	"8/82"	"8"	"82"	"18742370.6584473"	"HCD"	"MS2"	"0"	"333.7"	"48.433"	"48.4828"	"14720"	"14720"	"14704"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"470.7"	""	"408.2"	""	"422.5"	""	"581.2"	"0.3"	"605.8"	"674.2"	""	"719"	"64"	"35.000"	"28.000"	"1.30827455487731E-05"	""	"0"	"5.034E-05"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"622.86139"	"1244.71550"	"1244.71602"	"-0.41"	"-0.00026"	"8/82"	"8"	"82"	"1375476.77496338"	"HCD"	"MS2"	"28.52978"	"65.8"	"100.000"	"48.8075"	"14852"	"14852"	"14831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.3"	""	"72.3"	""	"83.2"	""	"121.6"	"0.2"	"125.8"	"125.7"	""	"722"	"35"	"35.000"	"28.000"	"0.011028265218708"	"25"	"0"	"0.0005165"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.7551"	"0.0000"	"1"	"1"	"1"	"415.57669"	"1244.71552"	"1244.71602"	"-0.40"	"-0.00017"	"12/82"	"12"	"82"	"2749288.2154541"	"HCD"	"MS2"	"16.19476"	"48.4"	"100.000"	"48.8986"	"14876"	"14876"	"14856"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.6"	""	"64.3"	""	"62.4"	""	"82.5"	""	"96.6"	"89.7"	""	"722"	"49"	"35.000"	"28.000"	"0.000489223377858724"	"28"	"0"	"0.0005423"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"415.57672"	"1244.71561"	"1244.71602"	"-0.33"	"-0.00014"	"7/82"	"7"	"82"	"1983402.66864014"	"HCD"	"MS2"	"39.2549"	"48.5"	"100.000"	"48.5759"	"14745"	"14745"	"14717"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.7"	""	"58.9"	""	"73.7"	""	"81.4"	"0.6"	"86.4"	"100.7"	""	"722"	"48"	"35.000"	"28.000"	"0.000566900972364412"	""	"0"	"0.0003188"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"622.86157"	"1244.71587"	"1244.71602"	"-0.12"	"-0.00007"	"8/82"	"8"	"82"	"6364241.83392334"	"HCD"	"MS2"	"0"	"261.5"	"100.000"	"48.1833"	"14597"	"14597"	"14578"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"376.7"	""	"324.8"	""	"320.9"	""	"459.1"	""	"479.3"	"522.5"	""	"684"	"64"	"35.000"	"28.000"	"1.26772806849641E-05"	""	"0"	"4.515E-05"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTGVQNLR"	"[R].dLTGVQNLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"622.86163"	"1244.71599"	"1244.71602"	"-0.02"	"-0.00001"	"6/74"	"6"	"74"	"1560079.51434326"	"HCD"	"MS2"	"7.896079"	"78.2"	"100.000"	"55.8379"	"17702"	"17702"	"17681"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"116.8"	""	"94.2"	""	"87.4"	""	"120.9"	""	"139.1"	"186.2"	""	"674"	"41"	"35.000"	"28.000"	"0.00286173820087238"	"28"	"0"	"0.0003281"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"622.86163"	"1244.71599"	"1244.71602"	"-0.02"	"-0.00001"	"8/82"	"8"	"82"	"2334545.45050049"	"HCD"	"MS2"	"8.61047"	"107.5"	"100.000"	"49.0803"	"14951"	"14951"	"14934"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"142.2"	""	"131.7"	""	"149.5"	""	"181.9"	""	"205.9"	"208.3"	""	"674"	"50"	"35.000"	"28.000"	"0.000317416794028198"	""	"0"	"7.028E-05"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"622.86163"	"1244.71599"	"1244.71602"	"-0.02"	"-0.00001"	"8/82"	"8"	"82"	"20025526.8709106"	"HCD"	"MS2"	"0.1117885"	"535.6"	"68.887"	"48.7717"	"14825"	"14825"	"14808"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"747.5"	""	"647.7"	""	"659.2"	""	"947.7"	""	"990.4"	"1091.2"	""	"674"	"64"	"35.000"	"28.000"	"1.23774135267855E-05"	""	"0"	"4.44E-05"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7656"	"0.0000"	"1"	"1"	"1"	"622.86188"	"1244.71648"	"1244.71602"	"0.37"	"0.00023"	"8/82"	"8"	"82"	"2950484.21185303"	"HCD"	"MS2"	"0"	"128.8"	"100.000"	"48.4862"	"14708"	"14708"	"14686"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"189.2"	""	"147.2"	""	"154.8"	""	"235.3"	"0.8"	"236.4"	"257.1"	""	"815"	"64"	"36.000"	"29.000"	"1.57807490305559E-05"	""	"0"	"3.781E-05"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ARPDAEK"	"[R].aRPDAEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"622.87225"	"1244.73723"	"1244.73631"	"0.74"	"0.00046"	"5/62"	"5"	"62"	"2317945.65368652"	"HCD"	"MS2"	"0"	"123.6"	"100.000"	"21.6561"	"3825"	"3825"	"3806"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"163.0"	"2.2"	"116.8"	""	"128.0"	""	"217.7"	""	"280.1"	"271.0"	""	"785"	"21"	"35.000"	"28.000"	"0.301189384574514"	"22"	"0.008478"	"0.1037"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSMTEEYR"	"[R].tSMTEEYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.30231"	"1245.59734"	"1245.59827"	"-0.75"	"-0.00047"	"6/66"	"6"	"66"	"1557402.0012207"	"HCD"	"MS2"	"25.97421"	"99.6"	"100.000"	"33.8339"	"8770"	"8770"	"8747"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"132.8"	""	"96.1"	""	"113.2"	""	"148.5"	"0.5"	"224.8"	"231.3"	""	"350"	"19"	"32.000"	"25.000"	"0.225443671546298"	"14"	"0.0008629"	"0.009675"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSMTEEYR"	"[R].tSMTEEYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.30231"	"1245.59734"	"1245.59827"	"-0.75"	"-0.00047"	"6/66"	"6"	"66"	"1435496.10150146"	"HCD"	"MS2"	"18.2664"	"97.0"	"100.000"	"33.8640"	"8776"	"8776"	"8753"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"130.2"	""	"93.0"	""	"119.6"	""	"150.4"	""	"217.1"	"212.9"	""	"350"	"22"	"32.000"	"25.000"	"0.10163377306623"	"14"	"0.0004639"	"0.00767"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEGFFDR"	"[K].mVEGFFDR.[G]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"623.30981"	"1245.61235"	"1245.61353"	"-0.94"	"-0.00059"	"6/64"	"6"	"64"	"2522345.48303223"	"HCD"	"MS2"	"24.42143"	"108.9"	"100.000"	"69.3629"	"23183"	"23183"	"23161"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"112.2"	""	"108.3"	""	"125.3"	""	"295.0"	"4.9"	"196.3"	"190.6"	""	"409"	"24"	"33.000"	"26.000"	"0.0817887013261444"	"20"	"0.004606"	"0.04972"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEGFFDR"	"[K].mVEGFFDR.[G]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"623.31006"	"1245.61284"	"1245.61353"	"-0.55"	"-0.00034"	"6/64"	"6"	"64"	"2355942.2232666"	"HCD"	"MS2"	"21.70875"	"110.6"	"100.000"	"69.4962"	"23223"	"23223"	"23203"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"117.3"	""	"111.3"	""	"124.7"	""	"301.8"	"1.4"	"193.2"	"198.4"	""	"407"	"24"	"33.000"	"26.000"	"0.0743985400932708"	"20"	"0.003922"	"0.04006"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQITAGNAAR"	"[K].dQITAGNAAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"623.33984"	"1245.67241"	"1245.67488"	"-1.98"	"-0.00123"	"8/94"	"8"	"94"	"1441854.93225098"	"HCD"	"MS2"	"30.49435"	"79.1"	"100.000"	"27.0533"	"6022"	"6022"	"6002"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"117.1"	""	"85.2"	""	"96.8"	""	"138.0"	""	"160.9"	"158.6"	""	"690"	"48"	"35.000"	"28.000"	"0.000518583978301058"	"23"	"0"	"0.0003434"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQITAGNAAR"	"[K].dQITAGNAAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"623.34082"	"1245.67436"	"1245.67488"	"-0.41"	"-0.00026"	"7/94"	"7"	"94"	"1490266.96246338"	"HCD"	"MS2"	"68.24754"	"80.2"	"100.000"	"27.0172"	"5992"	"5992"	"5968"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"108.1"	""	"91.9"	""	"102.9"	""	"143.1"	""	"158.6"	"162.3"	""	"713"	"34"	"35.000"	"28.000"	"0.0149989043019054"	"22"	"0"	"0.0001386"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVAEEWVR"	"[R].qVAEEWVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H59"	"N-acetylneuraminate lyase OS=Rattus norvegicus OX=10116 GN=Npl PE=2 SV=1"	"Q66H59"	"N-acetylneuraminate lyase OS=Rattus norvegicus OX=10116 GN=Npl PE=2 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"623.34271"	"1245.67815"	"1245.67890"	"-0.61"	"-0.00038"	"6/72"	"6"	"72"	"747204.056640625"	"HCD"	"MS2"	"0"	"42.5"	"100.000"	"56.4049"	"17947"	"17947"	"17926"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.7"	""	"50.4"	""	"58.2"	""	"71.4"	""	"86.6"	"77.4"	""	"820"	"37"	"36.000"	"29.000"	"0.00799436285900799"	"18"	"0.0001301"	"0.004354"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVAEEWVR"	"[R].qVAEEWVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H59"	"N-acetylneuraminate lyase OS=Rattus norvegicus OX=10116 GN=Npl PE=2 SV=1"	"Q66H59"	"N-acetylneuraminate lyase OS=Rattus norvegicus OX=10116 GN=Npl PE=2 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"623.34277"	"1245.67827"	"1245.67890"	"-0.51"	"-0.00032"	"6/72"	"6"	"72"	"662059.247375488"	"HCD"	"MS2"	"9.233308"	"40.3"	"100.000"	"56.5936"	"18010"	"18010"	"17988"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.5"	""	"51.0"	""	"59.0"	""	"65.4"	""	"82.1"	"64.8"	""	"816"	"34"	"36.000"	"29.000"	"0.0154760513869262"	"18"	"0"	"0.003567"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAqAR.[K]"	"N-Term(TMT6plex); Q8(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"3"	"623.35284"	"1245.69841"	"1245.70003"	"-1.30"	"-0.00081"	"8/82"	"8"	"82"	"1916500.66064453"	"HCD"	"MS2"	"17.85474"	"101.4"	"100.000"	"53.5128"	"16759"	"16759"	"16738"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"131.9"	""	"111.9"	""	"129.7"	""	"179.3"	"3.2"	"204.3"	"202.5"	""	"865"	"18"	"36.000"	"29.000"	"0.756808692830165"	"25"	"0.0008629"	"0.01008"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SAAEVIAQAR"	"[K].sAAEVIAqAR.[K]"	"N-Term(TMT6plex); Q8(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"4"	"623.35315"	"1245.69902"	"1245.70003"	"-0.81"	"-0.00050"	"9/82"	"9"	"82"	"1911473.39642334"	"HCD"	"MS2"	"12.62931"	"96.8"	"100.000"	"53.2451"	"16661"	"16661"	"16637"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"131.3"	""	"118.1"	""	"123.8"	""	"160.5"	"5.1"	"198.7"	"181.1"	""	"861"	"11"	"36.000"	"29.000"	"3.68954792371675"	"22"	"0.001374"	"0.01608"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGIVLGADTR"	"[K].dGIVLGADTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"0"	"2"	"2"	"0.2373"	"0.0000"	"1"	"1"	"1"	"623.35339"	"1245.69951"	"1245.70003"	"-0.42"	"-0.00026"	"8/88"	"8"	"88"	"1785564.1317749"	"HCD"	"MS2"	"0"	"75.8"	"100.000"	"53.6066"	"16809"	"16809"	"16780"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"115.4"	""	"105.0"	""	"111.7"	""	"124.3"	""	"125.0"	"136.6"	""	"861"	"59"	"36.000"	"29.000"	"4.88622156146932E-05"	""	"0"	"2.332E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGIVLGADTR"	"[K].dGIVLGADTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"0"	"2"	"2"	"0.2821"	"0.0000"	"1"	"1"	"1"	"623.35345"	"1245.69963"	"1245.70003"	"-0.32"	"-0.00020"	"8/88"	"8"	"88"	"589168.508422852"	"HCD"	"MS2"	"7.901496"	"37.8"	"100.000"	"54.2511"	"17072"	"17072"	"17049"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.3"	""	"49.0"	""	"55.6"	"2.0"	"56.6"	"1.8"	"62.0"	"68.7"	""	"861"	"39"	"36.000"	"29.000"	"0.00484142441292762"	""	"0"	"0.0006926"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGIVLGADTR"	"[K].dGIVLGADTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"0"	"2"	"2"	"0.2381"	"0.0000"	"1"	"1"	"1"	"623.35345"	"1245.69963"	"1245.70003"	"-0.32"	"-0.00020"	"8/88"	"8"	"88"	"2075289.95440674"	"HCD"	"MS2"	"0"	"85.7"	"100.000"	"53.8671"	"16904"	"16904"	"16880"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"132.3"	""	"130.7"	""	"125.5"	""	"134.7"	""	"141.0"	"146.9"	""	"861"	"63"	"36.000"	"29.000"	"2.37122713302526E-05"	""	"0"	"8.531E-06"	"0.918"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVNSATGVPTV"	"[K].aVnSATGVPTV.[-]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"623.35364"	"1245.70000"	"1245.68880"	"8.99"	"0.00560"	"8/92"	"8"	"92"	"1016884.96893311"	"HCD"	"MS2"	"19.44558"	"47.0"	"100.000"	"72.9768"	"24655"	"24655"	"24637"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.7"	""	"59.6"	""	"66.9"	""	"74.4"	""	"89.8"	"91.1"	""	"804"	"24"	"36.000"	"29.000"	"0.157843264030639"	"24"	"0.001978"	"0.02203"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGIVLGADTR"	"[K].dGIVLGADTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"0"	"2"	"2"	"0.2456"	"0.0000"	"1"	"1"	"1"	"623.35364"	"1245.70000"	"1245.70003"	"-0.03"	"-0.00002"	"8/88"	"8"	"88"	"7767544.39874268"	"HCD"	"MS2"	"0"	"266.7"	"100.000"	"53.8876"	"16924"	"16924"	"16907"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"399.4"	""	"353.3"	""	"413.8"	""	"427.2"	""	"444.5"	"486.8"	""	"804"	"57"	"36.000"	"29.000"	"8.73425873903224E-05"	""	"0"	"6.131E-05"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGIVLGADTR"	"[K].dGIVLGADTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"0"	"2"	"2"	"0.2381"	"0.0000"	"1"	"1"	"1"	"623.35388"	"1245.70049"	"1245.70003"	"0.37"	"0.00023"	"8/88"	"8"	"88"	"6957155.1675415"	"HCD"	"MS2"	"0"	"254.6"	"100.000"	"54.1663"	"17026"	"17026"	"17008"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"385.2"	""	"352.7"	""	"384.8"	""	"394.6"	""	"435.8"	"459.7"	""	"876"	"63"	"36.000"	"29.000"	"2.31992588424546E-05"	""	"0"	"5.393E-05"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGIVLGADTR"	"[K].dGIVLGADTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"0"	"2"	"2"	"0.2364"	"0.0000"	"1"	"1"	"1"	"623.35400"	"1245.70073"	"1245.70003"	"0.56"	"0.00035"	"8/88"	"8"	"88"	"693259.092468262"	"HCD"	"MS2"	"9.714783"	"42.0"	"100.000"	"54.4760"	"17149"	"17149"	"17120"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.5"	""	"52.5"	""	"65.0"	""	"72.0"	""	"70.3"	"76.9"	""	"873"	"55"	"36.000"	"29.000"	"0.000124733827218316"	""	"0"	"0.0001503"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVNSATGVPTV"	"[K].aVnSATGVPTV.[-]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"623.35419"	"1245.70110"	"1245.68880"	"9.87"	"0.00615"	"8/92"	"8"	"92"	"875328.139221191"	"HCD"	"MS2"	"29.44883"	"38.2"	"100.000"	"73.0683"	"24679"	"24679"	"24654"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.7"	""	"49.4"	""	"52.6"	""	"71.5"	""	"68.7"	"75.3"	""	"869"	"25"	"36.000"	"29.000"	"0.12560004088878"	"20"	"0.0002479"	"0.005992"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVNSATGVPTV"	"[K].aVnSATGVPTV.[-]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"623.35571"	"1245.70415"	"1245.68880"	"12.32"	"0.00768"	"7/92"	"7"	"92"	"1405330.54589844"	"HCD"	"MS2"	"0"	"47.9"	"100.000"	"72.4665"	"24434"	"24434"	"24409"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.9"	""	"59.7"	""	"78.0"	""	"76.4"	""	"91.5"	"91.4"	""	"866"	"17"	"36.000"	"29.000"	"0.913035988921114"	"20"	"0.008777"	"0.1144"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPEEAK"	"[R].iTPEEAk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.1739"	"0.0000"	"1"	"1"	"1"	"623.37573"	"1245.74419"	"1245.74547"	"-1.03"	"-0.00064"	"6/54"	"6"	"54"	"10075052.498291"	"HCD"	"MS2"	"2.006648"	"645.2"	"100.000"	"43.6145"	"12742"	"12742"	"12734"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"909.0"	""	"916.6"	""	"980.1"	""	"1047.7"	""	"1186.9"	"1071.5"	""	"746"	"23"	"35.000"	"28.000"	"0.185655932697143"	""	"0.008478"	"0.1034"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPEEAK"	"[R].iTPEEAk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.2273"	"0.0000"	"1"	"1"	"1"	"623.37579"	"1245.74431"	"1245.74547"	"-0.93"	"-0.00058"	"6/54"	"6"	"54"	"10007566.8853149"	"HCD"	"MS2"	"0"	"623.2"	"100.000"	"43.7414"	"12784"	"12784"	"12768"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"872.3"	""	"861.5"	""	"961.9"	""	"1005.8"	""	"1166.2"	"1033.5"	""	"746"	"22"	"35.000"	"28.000"	"0.261642826310649"	""	"0.008478"	"0.104"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDVYDK"	"[K].NYTDVYDk.[N]"	"K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"623.81073"	"1246.61418"	"1246.61530"	"-0.89"	"-0.00056"	"6/78"	"6"	"78"	"1176359.2432251"	"HCD"	"MS2"	"51.21848"	"83.7"	"100.000"	"44.6695"	"13166"	"13166"	"13141"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"116.6"	""	"101.8"	""	"95.1"	""	"147.0"	"1.7"	"169.5"	"163.0"	""	"405"	"25"	"33.000"	"26.000"	"0.0598997524476688"	"17"	"0.008641"	"0.1074"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDVYDK"	"[K].NYTDVYDk.[N]"	"K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"623.81128"	"1246.61528"	"1246.61530"	"-0.01"	"-0.00001"	"6/78"	"6"	"78"	"1090693.74584961"	"HCD"	"MS2"	"60.61966"	"78.4"	"100.000"	"44.7711"	"13196"	"13196"	"13169"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"115.6"	""	"89.0"	""	"90.3"	""	"131.7"	""	"153.2"	"170.6"	""	"413"	"41"	"33.000"	"26.000"	"0.00180684149584466"	"17"	"0.002871"	"0.0271"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLEPPSFGR"	"[R].dLEPPSFGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3B8N7"	"TSC22 domain family protein 4 OS=Rattus norvegicus OX=10116 GN=Tsc22d4 PE=1 SV=1"	"Q3B8N7"	"TSC22 domain family protein 4 OS=Rattus norvegicus OX=10116 GN=Tsc22d4 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"8"	"623.83398"	"1246.66069"	"1246.66292"	"-1.79"	"-0.00111"	"3/74"	"3"	"74"	"338716.093688965"	"HCD"	"MS2"	"31.07474"	"24.9"	"100.000"	"68.7699"	"22927"	"22927"	"22901"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.0"	""	"29.7"	""	"30.9"	""	"45.8"	""	"53.6"	"42.0"	""	"851"	"8"	"36.000"	"29.000"	"6.529795261811"	"18"	"0.009542"	"0.1253"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLEPPSFGR"	"[R].dLEPPSFGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3B8N7"	"TSC22 domain family protein 4 OS=Rattus norvegicus OX=10116 GN=Tsc22d4 PE=1 SV=1"	"Q3B8N7"	"TSC22 domain family protein 4 OS=Rattus norvegicus OX=10116 GN=Tsc22d4 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"623.83478"	"1246.66228"	"1246.66292"	"-0.51"	"-0.00032"	"8/74"	"8"	"74"	"347573.295593262"	"HCD"	"MS2"	"22.36819"	"24.8"	"100.000"	"68.5701"	"22860"	"22860"	"22831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.0"	""	"32.2"	""	"33.2"	""	"36.1"	""	"54.9"	"48.4"	""	"839"	"8"	"36.000"	"29.000"	"6.74111855638902"	"18"	"0.008777"	"0.1141"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGSLDEVR"	"[R].eLGSLDEVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.6222"	"0.0000"	"1"	"1"	"1"	"623.84515"	"1246.68303"	"1246.68405"	"-0.81"	"-0.00051"	"7/76"	"7"	"76"	"2902962.91711426"	"HCD"	"MS2"	"0"	"141.2"	"100.000"	"59.5848"	"19244"	"19244"	"19240"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"242.7"	""	"195.8"	""	"198.8"	""	"208.7"	"2.1"	"235.6"	"251.4"	""	"931"	"45"	"36.000"	"29.000"	"0.00145854450466891"	""	"0"	"0.0004207"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGSLDEVR"	"[R].eLGSLDEVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.5208"	"0.0000"	"1"	"1"	"1"	"623.84540"	"1246.68352"	"1246.68405"	"-0.42"	"-0.00026"	"7/76"	"7"	"76"	"3702169.35943604"	"HCD"	"MS2"	"0"	"178.3"	"100.000"	"59.8513"	"19338"	"19338"	"19328"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"304.6"	""	"232.9"	""	"249.9"	""	"281.6"	"1.6"	"316.9"	"299.8"	""	"931"	"48"	"36.000"	"29.000"	"0.000737767781090648"	""	"0"	"0.0005736"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGSLDEVR"	"[R].eLGSLDEVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"623.84558"	"1246.68389"	"1246.68405"	"-0.13"	"-0.00008"	"7/76"	"7"	"76"	"1329560.51855469"	"HCD"	"MS2"	"0"	"79.1"	"100.000"	"59.8791"	"19344"	"19344"	"19334"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"109.5"	""	"95.1"	""	"100.8"	""	"113.8"	"0.4"	"166.2"	"164.9"	""	"874"	"33"	"36.000"	"29.000"	"0.0223090684989253"	"25"	"0.0004639"	"0.008052"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEGMDVVR"	"[K].vLEGMDVVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"623.85431"	"1246.70134"	"1246.70267"	"-1.07"	"-0.00067"	"7/70"	"7"	"70"	"1800234.16992188"	"HCD"	"MS2"	"27.91124"	"94.5"	"100.000"	"76.6898"	"26152"	"26152"	"26132"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"147.9"	""	"120.2"	""	"151.4"	""	"137.9"	""	"161.0"	"182.3"	""	"931"	"34"	"36.000"	"29.000"	"0.0198116061313757"	"19"	"0"	"0.0009658"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEGMDVVR"	"[K].vLEGMDVVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"623.85437"	"1246.70146"	"1246.70267"	"-0.97"	"-0.00061"	"6/70"	"6"	"70"	"564512.16217041"	"HCD"	"MS2"	"5.862"	"36.5"	"100.000"	"76.9894"	"26274"	"26274"	"26253"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.6"	""	"42.3"	""	"56.7"	""	"50.6"	"0.0"	"62.7"	"79.2"	""	"931"	"33"	"36.000"	"29.000"	"0.0219745345708202"	"20"	"0"	"0.002354"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEGMDVVR"	"[K].vLEGMDVVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"623.85455"	"1246.70183"	"1246.70267"	"-0.68"	"-0.00042"	"7/70"	"7"	"70"	"1828936.62072754"	"HCD"	"MS2"	"20.04419"	"89.2"	"100.000"	"76.7901"	"26185"	"26185"	"26172"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"122.2"	""	"123.2"	""	"129.9"	""	"122.7"	"0.4"	"166.3"	"180.4"	""	"947"	"36"	"36.000"	"29.000"	"0.0115963144501349"	"20"	"0"	"0.0008898"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEGMDVVR"	"[K].vLEGMDVVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"623.85498"	"1246.70268"	"1246.70267"	"0.01"	"0.00001"	"7/70"	"7"	"70"	"543631.181518555"	"HCD"	"MS2"	"17.81356"	"36.0"	"100.000"	"77.0971"	"26308"	"26308"	"26291"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.7"	""	"48.3"	""	"52.9"	""	"46.1"	""	"62.4"	"85.0"	""	"935"	"31"	"36.000"	"29.000"	"0.0346562537808179"	"16"	"0"	"0.002722"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQEEALK"	"[K].aQEEALk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"623.87323"	"1246.73918"	"1246.74072"	"-1.24"	"-0.00077"	"12/60"	"12"	"60"	"6200627.41387939"	"HCD"	"MS2"	"22.26373"	"434.0"	"100.000"	"37.3700"	"10198"	"10198"	"10169"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"526.1"	""	"528.4"	""	"495.1"	""	"791.9"	""	"893.2"	"892.6"	""	"741"	"37"	"35.000"	"28.000"	"0.00763463382866536"	"25"	"0.003717"	"0.03805"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NADELVK"	"[K].nADELVk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"623.87335"	"1246.73943"	"1246.74072"	"-1.04"	"-0.00065"	"6/62"	"6"	"62"	"4387311.89709473"	"HCD"	"MS2"	"0"	"311.8"	"100.000"	"47.8276"	"14452"	"14452"	"14436"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"450.8"	""	"352.0"	""	"349.4"	""	"615.2"	""	"601.2"	"592.1"	""	"745"	"36"	"35.000"	"28.000"	"0.0104502403013701"	""	"0.004022"	"0.04363"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEEALAK"	"[K].qEEALAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"3"	"623.87347"	"1246.73967"	"1246.74072"	"-0.84"	"-0.00053"	"6/62"	"6"	"62"	"2243855.64154053"	"HCD"	"MS2"	"3.117557"	"164.0"	"100.000"	"38.5794"	"10682"	"10682"	"10661"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"255.7"	""	"194.8"	""	"189.1"	""	"258.4"	"0.9"	"333.3"	"323.9"	""	"742"	"32"	"35.000"	"28.000"	"0.0218964600743754"	""	"0.00447"	"0.04663"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQEEALK"	"[K].aQEEALk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"623.87347"	"1246.73967"	"1246.74072"	"-0.84"	"-0.00053"	"12/60"	"12"	"60"	"10416998.4651489"	"HCD"	"MS2"	"0"	"672.5"	"100.000"	"37.2127"	"10139"	"10139"	"10120"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"760.6"	""	"802.9"	""	"803.5"	""	"1209.6"	""	"1383.4"	"1434.1"	""	"742"	"37"	"35.000"	"28.000"	"0.00733455736481501"	"25"	"0.004069"	"0.04495"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NADELVK"	"[K].nADELVk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"623.87378"	"1246.74028"	"1246.74072"	"-0.35"	"-0.00022"	"6/62"	"6"	"62"	"3721474.25598145"	"HCD"	"MS2"	"18.44447"	"283.6"	"100.000"	"48.1352"	"14565"	"14565"	"14547"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"402.6"	""	"324.3"	""	"325.0"	""	"523.3"	""	"591.8"	"528.9"	""	"740"	"35"	"35.000"	"28.000"	"0.0106709165615684"	""	"0.003653"	"0.03752"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEEALAK"	"[K].qEEALAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"0"	"2"	"2"	"0.3235"	"0.0000"	"1"	"1"	"3"	"623.87433"	"1246.74138"	"1246.74072"	"0.53"	"0.00033"	"6/62"	"6"	"62"	"2122326.65289307"	"HCD"	"MS2"	"0"	"164.4"	"100.000"	"38.3740"	"10607"	"10607"	"10584"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"240.9"	""	"186.1"	""	"200.9"	""	"262.8"	"3.3"	"337.4"	"328.7"	""	"719"	"34"	"35.000"	"28.000"	"0.0135113546841696"	""	"0.00379"	"0.03908"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NADELVK"	"[K].nADELVk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"623.87433"	"1246.74138"	"1246.74072"	"0.53"	"0.00033"	"6/62"	"6"	"62"	"1566647.95153809"	"HCD"	"MS2"	"0"	"117.4"	"100.000"	"48.4378"	"14688"	"14688"	"14671"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"163.1"	""	"129.4"	""	"147.6"	""	"210.6"	"0.1"	"222.1"	"240.7"	""	"719"	"32"	"35.000"	"28.000"	"0.0219633657953553"	"24"	"0.003922"	"0.03975"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQEEALK"	"[K].aQEEALk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"623.87439"	"1246.74150"	"1246.74072"	"0.63"	"0.00039"	"12/60"	"12"	"60"	"1662732.01135254"	"HCD"	"MS2"	"0"	"134.6"	"100.000"	"37.7720"	"10361"	"10361"	"10346"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"153.1"	""	"158.1"	""	"173.7"	""	"225.6"	"1.9"	"273.5"	"292.6"	""	"719"	"40"	"35.000"	"28.000"	"0.00333963416047387"	"26"	"0.001728"	"0.02009"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQEEALK"	"[K].aQEEALk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"623.87463"	"1246.74199"	"1246.74072"	"1.02"	"0.00063"	"12/60"	"12"	"60"	"7465108.68157959"	"HCD"	"MS2"	"5.595403"	"532.9"	"100.000"	"37.4832"	"10247"	"10247"	"10238"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"605.7"	""	"598.9"	""	"634.5"	""	"891.8"	""	"1144.1"	"1200.0"	""	"717"	"37"	"35.000"	"28.000"	"0.0072692425494838"	"25"	"0.003967"	"0.04133"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQEEALK"	"[K].aQEEALk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"623.87512"	"1246.74297"	"1246.74072"	"1.80"	"0.00112"	"12/60"	"12"	"60"	"8062363.76068115"	"HCD"	"MS2"	"5.457267"	"545.3"	"100.000"	"37.6609"	"10312"	"10312"	"10301"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"612.6"	""	"637.1"	""	"629.2"	""	"916.7"	""	"1151.5"	"1242.0"	""	"708"	"41"	"35.000"	"28.000"	"0.00289736534999716"	"27"	"0.003449"	"0.03362"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQEEALK"	"[K].aQEEALk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"623.87518"	"1246.74309"	"1246.74072"	"1.90"	"0.00118"	"12/60"	"12"	"60"	"1682064.64941406"	"HCD"	"MS2"	"4.412088"	"129.0"	"100.000"	"37.9566"	"10429"	"10429"	"10413"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"148.2"	""	"157.9"	""	"160.2"	""	"211.3"	""	"252.2"	"297.4"	""	"712"	"38"	"35.000"	"28.000"	"0.00521735031380304"	"25"	"0.002547"	"0.02511"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIANGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"624.33191"	"1247.65654"	"1247.65817"	"-1.30"	"-0.00081"	"7/84"	"7"	"84"	"4516215.32385254"	"HCD"	"MS2"	"41.74964"	"211.3"	"100.000"	"51.9851"	"16135"	"16135"	"16123"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"377.2"	""	"214.8"	""	"254.5"	""	"386.2"	""	"366.7"	"401.6"	""	"828"	"27"	"36.000"	"29.000"	"0.0809096534691013"	"23"	"0"	"0.001972"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIANGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"624.33203"	"1247.65679"	"1247.65817"	"-1.11"	"-0.00069"	"14/84"	"14"	"84"	"4208141.06115723"	"HCD"	"MS2"	"43.38405"	"189.7"	"100.000"	"51.6784"	"16022"	"16022"	"16005"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"311.4"	""	"200.2"	""	"212.8"	""	"336.6"	"0.2"	"359.1"	"378.0"	""	"808"	"22"	"36.000"	"29.000"	"0.282736166384919"	"23"	"0"	"0.002731"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIANGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"624.33234"	"1247.65740"	"1247.65817"	"-0.62"	"-0.00039"	"8/84"	"8"	"84"	"18933998.1680908"	"HCD"	"MS2"	"20.45864"	"358.7"	"42.787"	"52.2819"	"16257"	"16257"	"16240"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"619.3"	""	"371.4"	""	"467.2"	""	"629.7"	""	"629.2"	"683.2"	""	"810"	"31"	"36.000"	"29.000"	"0.0340765032366304"	"24"	"0"	"0.001894"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIANGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"624.33264"	"1247.65801"	"1247.65817"	"-0.13"	"-0.00008"	"8/84"	"8"	"84"	"19837497.4857178"	"HCD"	"MS2"	"19.74458"	"384.3"	"42.847"	"51.9751"	"16143"	"16143"	"16126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"677.6"	""	"395.8"	""	"475.9"	""	"719.3"	"1.9"	"662.9"	"704.1"	""	"802"	"31"	"36.000"	"29.000"	"0.0332004807648646"	"23"	"0"	"0.001647"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLQSVAEER"	"[R].sLQSVAEER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"624.34235"	"1247.67742"	"1247.67930"	"-1.51"	"-0.00094"	"7/90"	"7"	"90"	"4711139.06848145"	"HCD"	"MS2"	"10.52442"	"229.5"	"100.000"	"40.9649"	"11662"	"11662"	"11646"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"311.1"	""	"239.0"	""	"298.9"	""	"415.4"	""	"465.6"	"452.2"	""	"807"	"53"	"36.000"	"29.000"	"0.000225862192203277"	"26"	"0"	"0.0002686"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLQSVAEER"	"[R].sLQSVAEER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"2"	"2"	"0.7679"	"0.0000"	"1"	"1"	"1"	"624.34290"	"1247.67851"	"1247.67930"	"-0.63"	"-0.00039"	"7/90"	"7"	"90"	"5111293.63214111"	"HCD"	"MS2"	"8.526352"	"244.2"	"100.000"	"41.1562"	"11730"	"11730"	"11713"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"357.6"	""	"264.2"	""	"297.5"	""	"436.6"	""	"487.4"	"475.7"	""	"810"	"56"	"36.000"	"29.000"	"0.000100566890764471"	"29"	"0"	"0.0002116"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAIVYGQPR"	"[K].dAIVYGQPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3B7D2"	"Serine palmitoyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Sptlc2 PE=1 SV=1"	"Q3B7D2"	"Serine palmitoyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Sptlc2 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"624.35071"	"1247.69414"	"1247.69455"	"-0.33"	"-0.00021"	"7/68"	"7"	"68"	"1100711.87451172"	"HCD"	"MS2"	"39.06267"	"78.2"	"100.000"	"44.7410"	"13195"	"13195"	"13169"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"100.4"	""	"99.3"	""	"90.8"	""	"153.6"	""	"147.3"	"150.8"	""	"920"	"42"	"36.000"	"29.000"	"0.00265312573160435"	"22"	"0"	"0.0007531"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAIVYGQPR"	"[K].dAIVYGQPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3B7D2"	"Serine palmitoyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Sptlc2 PE=1 SV=1"	"Q3B7D2"	"Serine palmitoyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Sptlc2 PE=1 SV=1"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"624.35120"	"1247.69512"	"1247.69455"	"0.45"	"0.00028"	"7/68"	"7"	"68"	"1003861.07086182"	"HCD"	"MS2"	"28.67562"	"71.4"	"100.000"	"44.9507"	"13269"	"13269"	"13247"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.4"	""	"76.1"	""	"96.0"	""	"133.1"	""	"137.9"	"142.9"	""	"921"	"43"	"36.000"	"29.000"	"0.00228154812865606"	"22"	"0"	"0.002242"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPYQAPVR"	"[R].sTPYQAPVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P49791"	"Nuclear pore complex protein Nup153 OS=Rattus norvegicus OX=10116 GN=Nup153 PE=1 SV=1"	"P49791"	"Nuclear pore complex protein Nup153 OS=Rattus norvegicus OX=10116 GN=Nup153 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"624.35138"	"1247.69548"	"1247.69455"	"0.75"	"0.00046"	"6/74"	"6"	"74"	"654056.22467041"	"HCD"	"MS2"	"17.5778"	"47.6"	"100.000"	"34.8620"	"9178"	"9178"	"9159"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.2"	""	"54.8"	""	"59.9"	""	"89.2"	"1.2"	"98.0"	"95.4"	""	"909"	"21"	"36.000"	"29.000"	"0.347963657841166"	"14"	"0.0002479"	"0.005986"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GQIMDAVIR"	"[K].gQImDAVIR.[E]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"0"	"2"	"2"	"0.0417"	"0.0000"	"1"	"1"	"1"	"624.35223"	"1247.69719"	"1247.69792"	"-0.59"	"-0.00037"	"6/78"	"6"	"78"	"825133.167663574"	"HCD"	"MS2"	"0"	"41.8"	"100.000"	"47.3945"	"14264"	"14264"	"14241"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.4"	""	"49.2"	""	"50.1"	""	"97.1"	"0.5"	"68.7"	"72.4"	""	"927"	"24"	"36.000"	"29.000"	"0.185801723620255"	"21"	"0.006834"	"0.07999"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQIMDAVIR"	"[K].gQImDAVIR.[E]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"0"	"2"	"2"	"0.0769"	"0.0000"	"1"	"1"	"1"	"624.35236"	"1247.69744"	"1247.69792"	"-0.39"	"-0.00024"	"8/78"	"8"	"78"	"1098080.08959961"	"HCD"	"MS2"	"0"	"54.4"	"100.000"	"47.1214"	"14164"	"14164"	"14142"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.0"	""	"59.6"	""	"63.3"	""	"124.8"	"1.8"	"91.8"	"94.9"	""	"927"	"39"	"36.000"	"29.000"	"0.0064424304456739"	""	"0.005183"	"0.05886"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGDTASPK"	"[K].nGDTASPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"624.35254"	"1247.69780"	"1247.69959"	"-1.43"	"-0.00089"	"7/76"	"7"	"76"	"3707873.46405029"	"HCD"	"MS2"	"0"	"261.4"	"100.000"	"23.6934"	"4672"	"4672"	"4649"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"421.1"	""	"326.4"	""	"354.8"	""	"439.5"	""	"448.1"	"485.9"	""	"911"	"26"	"36.000"	"29.000"	"0.103154548210864"	"19"	"0.000936"	"0.0133"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGDTASPK"	"[K].nGDTASPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"624.35303"	"1247.69878"	"1247.69959"	"-0.65"	"-0.00040"	"7/76"	"7"	"76"	"3767129.0758667"	"HCD"	"MS2"	"0"	"283.7"	"100.000"	"23.7876"	"4693"	"4693"	"4669"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"451.5"	"3.4"	"354.1"	""	"391.4"	""	"470.4"	""	"504.5"	"514.8"	""	"945"	"31"	"36.000"	"29.000"	"0.0400314953181432"	"21"	"0.0008629"	"0.009823"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVSVETTR"	"[K].qVVSVETTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"624.35486"	"1247.70244"	"1247.71568"	"-10.61"	"-0.00662"	"7/88"	"7"	"88"	"3295782.99365234"	"HCD"	"MS2"	"0"	"184.9"	"100.000"	"36.3209"	"9776"	"9776"	"9759"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"220.5"	""	"201.2"	""	"199.2"	""	"359.7"	""	"412.8"	"367.9"	""	"998"	"27"	"36.000"	"29.000"	"0.0993345996154605"	"21"	"0.000936"	"0.01233"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSTTIEAVK"	"[M].aGSTTIEAVk.[R]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"624.35504"	"1247.70281"	"1247.70445"	"-1.32"	"-0.00082"	"6/80"	"6"	"80"	"4799135.55310059"	"HCD"	"MS2"	"2.422786"	"150.0"	"100.000"	"63.8829"	"20941"	"20941"	"20919"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"185.4"	""	"199.9"	""	"213.2"	""	"268.9"	"3.4"	"254.0"	"296.1"	""	"974"	"42"	"36.000"	"29.000"	"0.00296844468955963"	"29"	"0"	"0.002065"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSTTIEAVK"	"[M].aGSTTIEAVk.[R]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"624.35516"	"1247.70305"	"1247.70445"	"-1.12"	"-0.00070"	"6/80"	"6"	"80"	"4663849.77258301"	"HCD"	"MS2"	"1.336095"	"145.9"	"100.000"	"63.7545"	"20903"	"20903"	"20885"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"188.9"	""	"210.0"	""	"200.3"	""	"257.3"	"1.3"	"247.5"	"276.4"	""	"977"	"42"	"36.000"	"29.000"	"0.00286988548710796"	"29"	"0"	"0.001079"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVSVETTR"	"[K].qVVSVETTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"624.35529"	"1247.70329"	"1247.71568"	"-9.93"	"-0.00619"	"7/88"	"7"	"88"	"2727489.66418457"	"HCD"	"MS2"	"0"	"153.5"	"100.000"	"36.5265"	"9853"	"9853"	"9832"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"188.1"	"2.6"	"167.7"	""	"174.8"	""	"311.6"	""	"304.8"	"309.6"	""	"977"	"45"	"36.000"	"29.000"	"0.00157349210454196"	"25"	"0"	"0.002443"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSTTIEAVK"	"[M].aGSTTIEAVk.[R]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"624.35559"	"1247.70391"	"1247.70445"	"-0.44"	"-0.00027"	"7/80"	"7"	"80"	"2287119.8682251"	"HCD"	"MS2"	"10.72577"	"86.4"	"100.000"	"64.4634"	"21178"	"21178"	"21161"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"98.1"	""	"109.5"	""	"110.8"	""	"144.2"	""	"172.0"	"189.2"	""	"977"	"43"	"36.000"	"29.000"	"0.00236518201564833"	"29"	"0"	"0.0006693"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSTTIEAVK"	"[M].aGSTTIEAVk.[R]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"0"	"2"	"2"	"0.7069"	"0.0000"	"1"	"1"	"1"	"624.35583"	"1247.70439"	"1247.70445"	"-0.04"	"-0.00003"	"7/80"	"7"	"80"	"19529873.9355469"	"HCD"	"MS2"	"0"	"249.6"	"46.373"	"64.1616"	"21055"	"21055"	"21043"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"284.2"	""	"303.1"	""	"335.2"	""	"458.7"	""	"483.8"	"503.7"	""	"854"	"58"	"36.000"	"29.000"	"7.16849315738334E-05"	""	"0"	"0.0005672"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSTTIEAVK"	"[M].aGSTTIEAVk.[R]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"0"	"2"	"2"	"0.8448"	"0.0000"	"1"	"1"	"1"	"624.35590"	"1247.70452"	"1247.70445"	"0.05"	"0.00003"	"7/80"	"7"	"80"	"20573293.2932129"	"HCD"	"MS2"	"0"	"253.6"	"46.010"	"64.0380"	"21019"	"21019"	"21002"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"277.1"	""	"326.6"	""	"366.1"	""	"470.2"	""	"447.3"	"518.0"	""	"854"	"58"	"36.000"	"29.000"	"7.08643609475839E-05"	"25"	"0"	"0.0008357"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSTTIEAVK"	"[M].aGSTTIEAVk.[R]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"624.35596"	"1247.70464"	"1247.70445"	"0.15"	"0.00009"	"7/80"	"7"	"80"	"2520790.59588623"	"HCD"	"MS2"	"8.67686"	"89.7"	"100.000"	"64.3328"	"21138"	"21138"	"21126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"104.8"	""	"109.2"	""	"115.9"	""	"157.0"	""	"171.9"	"199.7"	""	"854"	"42"	"36.000"	"29.000"	"0.0024234154650945"	""	"0"	"0.002591"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVSVETTR"	"[K].qVVSVETTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"624.36200"	"1247.71672"	"1247.71568"	"0.83"	"0.00052"	"7/88"	"7"	"88"	"2955223.41833496"	"HCD"	"MS2"	"0"	"155.1"	"100.000"	"36.6000"	"9883"	"9883"	"9864"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"183.4"	""	"190.6"	""	"188.0"	""	"313.9"	""	"292.0"	"306.3"	""	"876"	"40"	"36.000"	"29.000"	"0.00463953131627653"	"23"	"0"	"0.001146"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAVETK"	"[K].eLAVETk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"624.38379"	"1247.76030"	"1247.76112"	"-0.66"	"-0.00041"	"12/58"	"12"	"58"	"1672643.14001465"	"HCD"	"MS2"	"5.486223"	"127.6"	"100.000"	"50.8041"	"15654"	"15654"	"15636"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"181.1"	""	"154.6"	""	"164.6"	""	"236.4"	"0.9"	"246.1"	"225.4"	""	"600"	"40"	"34.000"	"27.000"	"0.00275499778945075"	""	"0.001211"	"0.01412"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAVETK"	"[K].eLAVETk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.6757"	"0.0000"	"1"	"1"	"1"	"624.38403"	"1247.76079"	"1247.76112"	"-0.27"	"-0.00017"	"6/58"	"6"	"58"	"1819945.99603271"	"HCD"	"MS2"	"7.469678"	"133.5"	"100.000"	"50.4078"	"15503"	"15503"	"15490"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"185.3"	""	"168.4"	""	"189.3"	""	"225.1"	""	"271.2"	"226.6"	""	"591"	"37"	"34.000"	"27.000"	"0.00600561496731654"	"27"	"0.001374"	"0.01725"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIAnGDR.[Q]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"624.82330"	"1248.63933"	"1248.64218"	"-2.28"	"-0.00143"	"11/84"	"11"	"84"	"420046.196228027"	"HCD"	"MS2"	"17.45846"	"28.5"	"100.000"	"56.2756"	"17881"	"17881"	"17851"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.4"	""	"29.4"	""	"35.2"	""	"54.5"	""	"51.2"	"55.6"	""	"713"	"30"	"35.000"	"28.000"	"0.0385531203637715"	"21"	"0.000936"	"0.01279"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIAnGDR.[Q]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"624.82361"	"1248.63994"	"1248.64218"	"-1.80"	"-0.00112"	"10/84"	"10"	"84"	"542876.620422363"	"HCD"	"MS2"	"0"	"35.7"	"100.000"	"56.1237"	"17833"	"17833"	"17805"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.4"	""	"36.2"	""	"46.8"	""	"66.5"	""	"63.8"	"74.1"	""	"724"	"30"	"35.000"	"28.000"	"0.0367882026819192"	"22"	"0.001311"	"0.01568"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIAnGDR.[Q]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"624.82410"	"1248.64092"	"1248.64218"	"-1.01"	"-0.00063"	"11/84"	"11"	"84"	"2033001.17358398"	"HCD"	"MS2"	"58.8338"	"98.6"	"100.000"	"58.5907"	"18839"	"18839"	"18815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"155.5"	""	"119.0"	""	"122.3"	""	"170.4"	""	"174.9"	"193.7"	""	"709"	"24"	"35.000"	"28.000"	"0.135087834393092"	"21"	"0.002711"	"0.0261"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIAnGDR.[Q]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"624.82440"	"1248.64153"	"1248.64218"	"-0.53"	"-0.00033"	"7/84"	"7"	"84"	"915679.073974609"	"HCD"	"MS2"	"35.20078"	"52.7"	"100.000"	"59.1244"	"19042"	"19042"	"19016"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.0"	""	"64.7"	""	"70.2"	""	"78.3"	"1.6"	"96.9"	"104.6"	""	"711"	"23"	"35.000"	"28.000"	"0.199452555479543"	"19"	"0.001211"	"0.01473"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIAnGDR.[Q]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"624.82446"	"1248.64165"	"1248.64218"	"-0.43"	"-0.00027"	"8/84"	"8"	"84"	"2211592.28076172"	"HCD"	"MS2"	"28.4535"	"103.1"	"100.000"	"57.0889"	"18212"	"18212"	"18192"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"192.0"	""	"113.9"	""	"114.5"	""	"188.2"	""	"174.8"	"194.2"	""	"711"	"40"	"35.000"	"28.000"	"0.00380049009563655"	"24"	"0"	"0.0008657"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIAnGDR.[Q]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"624.82458"	"1248.64189"	"1248.64218"	"-0.23"	"-0.00014"	"8/84"	"8"	"84"	"1895708.65423584"	"HCD"	"MS2"	"39.69595"	"89.5"	"100.000"	"58.8090"	"18913"	"18913"	"18888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"144.4"	""	"94.1"	""	"110.8"	""	"166.4"	""	"158.7"	"174.1"	""	"711"	"27"	"35.000"	"28.000"	"0.0693169755213985"	"25"	"0"	"0.00203"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIAnGDR.[Q]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"624.82458"	"1248.64189"	"1248.64218"	"-0.23"	"-0.00014"	"8/84"	"8"	"84"	"6215510.39837646"	"HCD"	"MS2"	"25.42915"	"293.4"	"100.000"	"57.3628"	"18324"	"18324"	"18312"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"492.8"	""	"320.1"	""	"347.6"	""	"516.9"	""	"536.9"	"566.2"	""	"711"	"18"	"35.000"	"28.000"	"0.506803499525578"	"21"	"0"	"0.002679"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIAnGDR.[Q]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"624.82465"	"1248.64202"	"1248.64218"	"-0.13"	"-0.00008"	"7/84"	"7"	"84"	"1977577.21289063"	"HCD"	"MS2"	"39.9945"	"95.9"	"100.000"	"56.8702"	"18137"	"18137"	"18115"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"174.0"	""	"107.9"	""	"114.4"	""	"163.3"	"1.8"	"176.0"	"170.6"	""	"707"	"25"	"35.000"	"28.000"	"0.116785632756514"	"22"	"0.0003538"	"0.007392"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIAnGDR.[Q]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"624.82477"	"1248.64226"	"1248.64218"	"0.06"	"0.00004"	"7/84"	"7"	"84"	"6012515.98840332"	"HCD"	"MS2"	"13.37629"	"283.6"	"100.000"	"57.1558"	"18254"	"18254"	"18237"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"493.0"	""	"285.8"	""	"342.4"	""	"503.8"	""	"507.8"	"556.1"	""	"708"	"28"	"35.000"	"28.000"	"0.0503504390641478"	"24"	"0"	"0.001457"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIAnGDR.[Q]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"624.82526"	"1248.64324"	"1248.64218"	"0.84"	"0.00053"	"6/84"	"6"	"84"	"986257.314331055"	"HCD"	"MS2"	"38.50988"	"56.6"	"100.000"	"58.9107"	"18970"	"18970"	"18943"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"85.4"	""	"75.6"	""	"69.9"	""	"84.2"	"4.7"	"102.9"	"114.4"	""	"722"	"16"	"35.000"	"28.000"	"0.844320243156027"	"20"	"0.001886"	"0.02175"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGADMEDLR"	"[R].lGADMEDLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"624.82538"	"1248.64348"	"1248.64555"	"-1.66"	"-0.00104"	"7/70"	"7"	"70"	"1422186.88330078"	"HCD"	"MS2"	"0"	"75.4"	"100.000"	"68.6717"	"22901"	"22901"	"22879"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"102.1"	""	"110.2"	""	"98.0"	""	"111.7"	""	"142.5"	"151.5"	""	"722"	"38"	"35.000"	"28.000"	"0.00548917658233431"	"23"	"0.0001301"	"0.004722"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGADMEDLR"	"[R].lGADMEDLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"624.82574"	"1248.64421"	"1248.64555"	"-1.07"	"-0.00067"	"5/70"	"5"	"70"	"2177069.40655518"	"HCD"	"MS2"	"11.99835"	"103.2"	"100.000"	"69.2802"	"23149"	"23149"	"23129"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"138.4"	""	"150.8"	""	"128.2"	""	"153.2"	""	"179.1"	"230.7"	""	"720"	"38"	"35.000"	"28.000"	"0.00612777063022182"	"24"	"0"	"0.001007"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGADMEDLR"	"[R].lGADMEDLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"624.82587"	"1248.64446"	"1248.64555"	"-0.88"	"-0.00055"	"9/70"	"9"	"70"	"11472589.6838989"	"HCD"	"MS2"	"0"	"495.6"	"100.000"	"68.9759"	"23025"	"23025"	"23007"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"634.7"	""	"813.1"	""	"651.6"	""	"687.3"	"1.0"	"949.0"	"962.5"	""	"720"	"43"	"35.000"	"28.000"	"0.00198747878141073"	"28"	"0"	"0.00111"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGADMEDLR"	"[R].lGADMEDLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.6304"	"0.0000"	"1"	"1"	"1"	"624.82599"	"1248.64470"	"1248.64555"	"-0.68"	"-0.00043"	"6/70"	"6"	"70"	"1110508.51794434"	"HCD"	"MS2"	"23.49558"	"57.9"	"100.000"	"68.8091"	"22943"	"22943"	"22917"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.3"	""	"87.8"	""	"68.7"	""	"89.0"	""	"110.7"	"117.6"	""	"745"	"46"	"35.000"	"28.000"	"0.000885373006767766"	""	"0"	"0.001128"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGADMEDLR"	"[R].lGADMEDLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"624.82605"	"1248.64482"	"1248.64555"	"-0.58"	"-0.00037"	"5/70"	"5"	"70"	"2362383.92352295"	"HCD"	"MS2"	"8.599239"	"114.9"	"100.000"	"69.4152"	"23190"	"23190"	"23171"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"153.0"	""	"164.4"	""	"155.1"	""	"168.8"	""	"212.9"	"235.6"	""	"745"	"35"	"35.000"	"28.000"	"0.0121374171123248"	"28"	"0"	"0.001417"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIAnGDR.[Q]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"624.82623"	"1248.64519"	"1248.64218"	"2.41"	"0.00150"	"12/84"	"12"	"84"	"18635277.6732178"	"HCD"	"MS2"	"33.18279"	"332.3"	"44.408"	"57.7892"	"18512"	"18512"	"18495"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"570.2"	""	"324.0"	""	"403.0"	""	"609.9"	""	"613.1"	"632.0"	""	"745"	"29"	"35.000"	"28.000"	"0.0475473456282225"	"25"	"0"	"0.00243"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGADMEDLR"	"[R].lGADMEDLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"624.82648"	"1248.64568"	"1248.64555"	"0.10"	"0.00006"	"9/70"	"9"	"70"	"11180177.5623779"	"HCD"	"MS2"	"0"	"490.3"	"100.000"	"69.0995"	"23061"	"23061"	"23044"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"644.5"	""	"750.3"	""	"640.2"	""	"700.5"	""	"945.6"	"976.8"	""	"745"	"43"	"35.000"	"28.000"	"0.00205175866911012"	"28"	"0"	"0.0008615"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIAnGDR.[Q]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"624.82648"	"1248.64568"	"1248.64218"	"2.80"	"0.00175"	"8/84"	"8"	"84"	"18261943.6069336"	"HCD"	"MS2"	"48.89609"	"391.9"	"51.906"	"57.9431"	"18560"	"18560"	"18543"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"669.0"	""	"403.6"	""	"479.1"	""	"691.8"	""	"695.6"	"778.1"	""	"745"	"23"	"35.000"	"28.000"	"0.172633977601767"	"27"	"0"	"0.003613"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAGFTPQER"	"[K].nAGFTPQER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P43138"	"DNA-(apurinic or apyrimidinic site) lyase OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2"	"P43138"	"DNA-(apurinic or apyrimidinic site) lyase OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"624.82983"	"1248.65239"	"1248.65342"	"-0.82"	"-0.00051"	"6/86"	"6"	"86"	"6037188.2086792"	"HCD"	"MS2"	"14.69345"	"276.4"	"100.000"	"31.8036"	"7947"	"7947"	"7925"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"466.9"	""	"371.1"	""	"359.4"	""	"443.5"	"1.1"	"481.7"	"492.4"	""	"724"	"31"	"35.000"	"28.000"	"0.0267121331306735"	"20"	"0"	"0.002389"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAGFTPQER"	"[K].nAGFTPQER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P43138"	"DNA-(apurinic or apyrimidinic site) lyase OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2"	"P43138"	"DNA-(apurinic or apyrimidinic site) lyase OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"624.83008"	"1248.65288"	"1248.65342"	"-0.43"	"-0.00027"	"6/86"	"6"	"86"	"5305640.60070801"	"HCD"	"MS2"	"3.337934"	"250.7"	"100.000"	"31.8684"	"7964"	"7964"	"7945"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"430.6"	""	"344.5"	""	"339.1"	""	"376.8"	""	"431.7"	"449.4"	""	"718"	"30"	"35.000"	"28.000"	"0.0365674308311428"	"20"	"0"	"0.002645"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDYPLEAVR"	"[K].gDYPLEAVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"624.84204"	"1248.67681"	"1248.67857"	"-1.41"	"-0.00088"	"8/72"	"8"	"72"	"8805376.82684326"	"HCD"	"MS2"	"48.2226"	"406.2"	"100.000"	"57.2249"	"18282"	"18282"	"18265"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"658.4"	""	"490.8"	""	"523.8"	""	"624.9"	""	"728.7"	"824.2"	""	"875"	"31"	"36.000"	"29.000"	"0.0326571331804404"	"21"	"0"	"0.001562"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNIELDPR"	"[K].yNIELDPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P19139"	"Casein kinase II subunit alpha OS=Rattus norvegicus OX=10116 GN=Csnk2a1 PE=1 SV=2"	"P19139"	"Casein kinase II subunit alpha OS=Rattus norvegicus OX=10116 GN=Csnk2a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"624.84229"	"1248.67729"	"1248.67857"	"-1.02"	"-0.00064"	"5/72"	"5"	"72"	"535290.075927734"	"HCD"	"MS2"	"11.18768"	"25.5"	"100.000"	"66.3590"	"21959"	"21959"	"21933"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.5"	""	"24.8"	""	"30.5"	""	"44.7"	"0.1"	"61.5"	"53.5"	""	"837"	"31"	"36.000"	"29.000"	"0.0332426366232112"	"23"	"0.001374"	"0.01627"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDYPLEAVR"	"[K].gDYPLEAVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"624.84229"	"1248.67729"	"1248.67857"	"-1.02"	"-0.00064"	"11/72"	"11"	"72"	"9923541.65545654"	"HCD"	"MS2"	"38.12806"	"420.3"	"100.000"	"57.4320"	"18352"	"18352"	"18335"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"708.6"	""	"528.5"	""	"555.7"	""	"652.2"	""	"721.5"	"820.7"	""	"837"	"37"	"36.000"	"29.000"	"0.00924049980768409"	"20"	"0"	"0.0006397"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDYPLEAVR"	"[K].gDYPLEAVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"624.84302"	"1248.67876"	"1248.67857"	"0.15"	"0.00010"	"8/72"	"8"	"72"	"38523632.4943848"	"HCD"	"MS2"	"0.05173244"	"399.1"	"25.131"	"57.7152"	"18467"	"18467"	"18454"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"661.0"	""	"507.8"	""	"514.2"	""	"574.1"	""	"713.7"	"815.5"	""	"837"	"41"	"36.000"	"29.000"	"0.00358670338228909"	"22"	"0"	"0.00129"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDYPLEAVR"	"[K].gDYPLEAVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"624.84332"	"1248.67937"	"1248.67857"	"0.64"	"0.00040"	"12/72"	"12"	"72"	"40386039.0046387"	"HCD"	"MS2"	"0"	"386.2"	"22.456"	"57.5357"	"18409"	"18409"	"18392"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"645.0"	""	"465.1"	""	"521.5"	""	"523.7"	""	"710.1"	"798.2"	""	"830"	"47"	"36.000"	"29.000"	"0.00079624752737817"	"23"	"0"	"0.000568"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNIELDPR"	"[K].yNIELDPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P19139"	"Casein kinase II subunit alpha OS=Rattus norvegicus OX=10116 GN=Csnk2a1 PE=1 SV=2"	"P19139"	"Casein kinase II subunit alpha OS=Rattus norvegicus OX=10116 GN=Csnk2a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"624.84344"	"1248.67961"	"1248.67857"	"0.84"	"0.00052"	"5/72"	"5"	"72"	"506894.768615723"	"HCD"	"MS2"	"19.85036"	"22.7"	"100.000"	"66.3258"	"21930"	"21930"	"21911"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.1"	""	"20.0"	""	"28.0"	""	"38.5"	""	"51.0"	"55.7"	""	"847"	"39"	"36.000"	"29.000"	"0.00588644939318855"	"26"	"0.001374"	"0.01741"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGDTASPK"	"[K].nGDTASPk.[E]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.1786"	"0.0000"	"1"	"1"	"1"	"624.84497"	"1248.68266"	"1248.68360"	"-0.75"	"-0.00047"	"10/76"	"10"	"76"	"3818539.89221191"	"HCD"	"MS2"	"0"	"260.6"	"100.000"	"27.2625"	"6091"	"6091"	"6078"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"410.6"	""	"279.4"	""	"304.9"	""	"464.0"	"1.8"	"497.2"	"512.6"	""	"866"	"28"	"36.000"	"29.000"	"0.0673733118484998"	""	"0.0008629"	"0.01019"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NGDTASPK"	"[K].nGDTASPk.[E]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	""	"0.0417"	"2"	"2"	"2"	"624.84534"	"1248.68340"	"1248.68360"	"-0.16"	"-0.00010"	"5/76"	"5"	"76"	"2753102.2822876"	"HCD"	"MS2"	"0"	"185.3"	"100.000"	"25.8217"	"5508"	"5508"	"5483"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"266.6"	""	"196.5"	""	"237.0"	""	"326.6"	""	"351.3"	"383.0"	""	"831"	"23"	"36.000"	"29.000"	"0.204913715543276"	"26"	"0.0006732"	"0.009024"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGDTASPK"	"[K].nGDTASPk.[E]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.0714"	"0.0000"	"1"	"1"	"1"	"624.84552"	"1248.68376"	"1248.68360"	"0.13"	"0.00008"	"7/76"	"7"	"76"	"735057.470397949"	"HCD"	"MS2"	"0"	"64.3"	"100.000"	"27.4200"	"6170"	"6170"	"6149"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"100.5"	""	"67.4"	"1.7"	"80.8"	""	"112.2"	""	"116.4"	"131.9"	""	"838"	"28"	"36.000"	"29.000"	"0.0659498820211346"	""	"0.00557"	"0.0629"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDGISAAK"	"[K].eDGISAAk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P59215"	"Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"P59215"	"Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"624.86194"	"1248.71660"	"1248.71999"	"-2.71"	"-0.00169"	"7/64"	"7"	"64"	"1413353.37475586"	"HCD"	"MS2"	"0"	"121.3"	"100.000"	"39.5558"	"11089"	"11089"	"11064"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"132.4"	""	"121.6"	""	"117.4"	""	"225.4"	""	"278.5"	"282.0"	""	"807"	"34"	"36.000"	"29.000"	"0.0151650392630387"	"28"	"0.0003538"	"0.007424"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDGISAAK"	"[K].eDGISAAk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P59215"	"Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"P59215"	"Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"624.86249"	"1248.71770"	"1248.71999"	"-1.83"	"-0.00114"	"7/64"	"7"	"64"	"1019830.63592529"	"HCD"	"MS2"	"25.86537"	"81.3"	"100.000"	"39.6672"	"11125"	"11125"	"11101"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.0"	""	"108.3"	""	"64.3"	""	"158.4"	""	"174.4"	"190.1"	""	"813"	"31"	"36.000"	"29.000"	"0.032289442741542"	"26"	"0.0003538"	"0.006773"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGQETDK"	"[K].iGQETDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"624.86285"	"1248.71843"	"1248.71999"	"-1.25"	"-0.00078"	"5/60"	"5"	"60"	"3173664.69610596"	"HCD"	"MS2"	"0"	"237.5"	"100.000"	"35.6393"	"9499"	"9499"	"9481"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"313.5"	""	"257.7"	""	"269.9"	""	"426.8"	""	"500.7"	"487.3"	""	"766"	"23"	"35.000"	"28.000"	"0.203797463299182"	"21"	"0.008668"	"0.1082"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGQETDK"	"[K].iGQETDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"624.86346"	"1248.71965"	"1248.71999"	"-0.27"	"-0.00017"	"5/60"	"5"	"60"	"3040879.26660156"	"HCD"	"MS2"	"0"	"154.3"	"100.000"	"35.7833"	"9553"	"9553"	"9537"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"191.6"	""	"174.7"	""	"184.2"	""	"277.9"	""	"317.3"	"325.1"	""	"736"	"21"	"35.000"	"28.000"	"0.297062491131572"	"17"	"0.008052"	"0.09774"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEEGLQK"	"[R].sEEGLQk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"624.86346"	"1248.71965"	"1248.71999"	"-0.27"	"-0.00017"	"6/54"	"6"	"54"	"7294659.34460449"	"HCD"	"MS2"	"1.024447"	"515.5"	"100.000"	"35.4780"	"9429"	"9429"	"9410"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"630.2"	""	"621.8"	""	"616.0"	""	"921.4"	""	"1048.1"	"1065.4"	""	"736"	"20"	"35.000"	"28.000"	"0.362950850712285"	"19"	"0.00912"	"0.1178"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEGPLSVFGDR"	"[-].mEGPLSVFGDR.[S]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9839"	"0.0000"	"1"	"1"	"1"	"625.29706"	"1249.58684"	"1249.58815"	"-1.05"	"-0.00065"	"7/96"	"7"	"96"	"124850.140075684"	"HCD"	"MS2"	"11.05517"	"2.5"	"100.000"	"110.5886"	"38573"	"38573"	"38568"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.0"	""	""	""	"5.1"	""	"4.9"	""	"3.9"	"6.9"	"NoQuanLabels"	"284"	"62"	"31.000"	"24.000"	"9.25312319566396E-06"	"18"	"0"	"0.0001146"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEGPLSVFGDR"	"[-].mEGPLSVFGDR.[S]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9877"	"0.0000"	"1"	"1"	"1"	"625.29730"	"1249.58733"	"1249.58815"	"-0.66"	"-0.00041"	"8/96"	"8"	"96"	"96533.8524169922"	"HCD"	"MS2"	"9.862972"	"1.9"	"100.000"	"110.6235"	"38465"	"38465"	"38462"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.1"	""	""	""	"2.8"	""	"4.5"	""	"4.4"	"4.0"	"NoQuanLabels"	"285"	"81"	"31.000"	"24.000"	"1.23542067295546E-07"	"19"	"0"	"0.0002153"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEGVNMER"	"[R].wEGVNMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"625.31274"	"1249.61821"	"1249.61967"	"-1.17"	"-0.00073"	"6/72"	"6"	"72"	"1110508.77624512"	"HCD"	"MS2"	"48.0523"	"68.1"	"100.000"	"59.1521"	"19053"	"19053"	"19032"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.3"	""	"80.2"	""	"96.8"	""	"102.1"	""	"126.3"	"135.4"	""	"507"	"19"	"34.000"	"27.000"	"0.298523114287524"	"19"	"0.003111"	"0.03142"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQEQMSR"	"[K].eLQEQMSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"625.32312"	"1249.63896"	"1249.64080"	"-1.47"	"-0.00092"	"6/78"	"6"	"78"	"933826.47668457"	"HCD"	"MS2"	"13.02109"	"71.1"	"100.000"	"34.3984"	"8996"	"8996"	"8967"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"109.2"	""	"83.1"	""	"94.0"	""	"103.6"	"0.6"	"134.2"	"149.0"	""	"643"	"37"	"35.000"	"28.000"	"0.00594539861001452"	""	"0.0002479"	"0.005732"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQEQMSR"	"[K].eLQEQMSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"625.32336"	"1249.63945"	"1249.64080"	"-1.08"	"-0.00068"	"6/78"	"6"	"78"	"906200.138183594"	"HCD"	"MS2"	"19.29342"	"64.9"	"100.000"	"34.4503"	"9011"	"9011"	"8983"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.4"	""	"78.6"	""	"85.8"	""	"93.5"	""	"130.2"	"142.9"	""	"650"	"27"	"35.000"	"28.000"	"0.0642515133036355"	"28"	"0.0003538"	"0.0066"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSETNDTR"	"[K].vVSETNDTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.7593"	"0.0000"	"1"	"1"	"1"	"625.33240"	"1249.65752"	"1249.65856"	"-0.83"	"-0.00052"	"6/80"	"6"	"80"	"540518.88861084"	"HCD"	"MS2"	"0"	"34.2"	"100.000"	"25.4566"	"5360"	"5360"	"5333"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.2"	""	"31.5"	""	"39.6"	""	"64.6"	"0.6"	"67.5"	"68.6"	""	"749"	"54"	"35.000"	"28.000"	"0.000139782184094497"	""	"0"	"0.001067"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSETNDTR"	"[K].vVSETNDTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"625.33276"	"1249.65825"	"1249.65856"	"-0.25"	"-0.00015"	"6/80"	"6"	"80"	"614984.31817627"	"HCD"	"MS2"	"0"	"36.7"	"100.000"	"25.3691"	"5339"	"5339"	"5313"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.6"	""	"42.1"	"2.2"	"43.6"	""	"71.9"	""	"72.5"	"70.9"	""	"749"	"50"	"35.000"	"28.000"	"0.000349503735648474"	"28"	"0"	"0.001245"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVEDEK"	"[K].aTVEDEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.5641"	"0.0000"	"1"	"1"	"1"	"625.35516"	"1249.70305"	"1249.70400"	"-0.76"	"-0.00048"	"12/56"	"12"	"56"	"3825566.59838867"	"HCD"	"MS2"	"0"	"282.3"	"100.000"	"32.8808"	"8383"	"8383"	"8363"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"289.1"	""	"221.7"	""	"252.1"	""	"506.0"	""	"723.0"	"707.7"	""	"766"	"39"	"35.000"	"28.000"	"0.00501416676508773"	""	"0.003449"	"0.03413"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVEDEK"	"[K].aTVEDEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6098"	"0.0000"	"1"	"1"	"1"	"625.35516"	"1249.70305"	"1249.70400"	"-0.76"	"-0.00048"	"12/56"	"12"	"56"	"5619151.01501465"	"HCD"	"MS2"	"0"	"424.8"	"100.000"	"32.5611"	"8254"	"8254"	"8227"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"484.9"	""	"359.2"	""	"388.8"	""	"803.6"	"0.3"	"1045.5"	"963.9"	""	"766"	"41"	"35.000"	"28.000"	"0.0031564489804998"	""	"0.003507"	"0.03599"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVEDEK"	"[K].aTVEDEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"625.35529"	"1249.70329"	"1249.70400"	"-0.57"	"-0.00035"	"12/56"	"12"	"56"	"3253005.86938477"	"HCD"	"MS2"	"0"	"249.2"	"100.000"	"32.9110"	"8389"	"8389"	"8372"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"253.2"	""	"167.8"	""	"251.6"	""	"446.2"	"0.0"	"634.6"	"623.1"	""	"766"	"37"	"35.000"	"28.000"	"0.00767712786480857"	""	"0.002937"	"0.02782"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVEDEK"	"[K].aTVEDEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"625.35529"	"1249.70329"	"1249.70400"	"-0.57"	"-0.00035"	"12/56"	"12"	"56"	"6869634.25018311"	"HCD"	"MS2"	"0"	"512.1"	"100.000"	"32.6009"	"8263"	"8263"	"8243"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"580.4"	""	"402.8"	""	"465.7"	""	"971.1"	""	"1270.4"	"1191.5"	""	"766"	"37"	"35.000"	"28.000"	"0.00776602481576651"	""	"0.004069"	"0.04382"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"417.24057"	"1249.70716"	"1249.71020"	"-2.44"	"-0.00102"	"9/82"	"9"	"82"	"5740164.08398438"	"HCD"	"MS2"	"2.394143"	"77.0"	"100.000"	"42.1783"	"12157"	"12157"	"12140"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"118.7"	""	"103.4"	""	"110.4"	""	"144.4"	""	"129.0"	"126.8"	""	"716"	"29"	"35.000"	"28.000"	"0.0464390179012256"	"20"	"0.003449"	"0.03254"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"625.35791"	"1249.70854"	"1249.71020"	"-1.33"	"-0.00083"	"8/82"	"8"	"82"	"5479097.62060547"	"HCD"	"MS2"	"4.045209"	"187.4"	"100.000"	"43.7108"	"12780"	"12780"	"12760"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"320.0"	""	"255.2"	""	"244.3"	""	"416.5"	"0.5"	"257.9"	"274.7"	""	"735"	"26"	"35.000"	"28.000"	"0.0980070559211645"	"21"	"0"	"0.003"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"625.35791"	"1249.70854"	"1249.71020"	"-1.33"	"-0.00083"	"6/82"	"6"	"82"	"10020679.1556396"	"HCD"	"MS2"	"17.92249"	"289.9"	"100.000"	"43.5627"	"12712"	"12712"	"12695"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"503.5"	""	"406.7"	""	"380.9"	""	"619.2"	""	"392.6"	"433.2"	""	"735"	"19"	"35.000"	"28.000"	"0.458413441484282"	"21"	"0.0001301"	"0.004004"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"417.24106"	"1249.70862"	"1249.71020"	"-1.26"	"-0.00053"	"10/82"	"10"	"82"	"3568640.21405029"	"HCD"	"MS2"	"2.685215"	"63.7"	"100.000"	"43.3946"	"12653"	"12653"	"12637"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"86.9"	""	"86.3"	""	"85.9"	""	"108.5"	""	"117.2"	"119.5"	""	"735"	"28"	"35.000"	"28.000"	"0.0596015210779407"	"20"	"0.00413"	"0.04522"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"417.24109"	"1249.70871"	"1249.71020"	"-1.19"	"-0.00050"	"9/82"	"9"	"82"	"9499407.77911377"	"HCD"	"MS2"	"1.62261"	"101.7"	"97.962"	"42.4910"	"12285"	"12285"	"12268"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"160.2"	""	"140.3"	""	"147.2"	""	"201.8"	""	"150.7"	"164.0"	""	"708"	"30"	"35.000"	"28.000"	"0.0317689793253265"	"21"	"0.0023"	"0.02292"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"625.35803"	"1249.70879"	"1249.71020"	"-1.13"	"-0.00071"	"8/82"	"8"	"82"	"3585959.50567627"	"HCD"	"MS2"	"4.518963"	"139.2"	"100.000"	"44.0211"	"12895"	"12895"	"12875"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"236.0"	""	"202.5"	""	"186.4"	""	"279.4"	""	"204.1"	"206.6"	""	"708"	"24"	"35.000"	"28.000"	"0.129420556231046"	"22"	"0"	"0.001589"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"625.35809"	"1249.70891"	"1249.71020"	"-1.03"	"-0.00065"	"8/82"	"8"	"82"	"10964851.8427124"	"HCD"	"MS2"	"11.75133"	"323.2"	"100.000"	"43.4129"	"12661"	"12661"	"12649"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"555.6"	""	"463.2"	""	"431.3"	""	"680.5"	"3.0"	"450.4"	"466.5"	""	"716"	"18"	"35.000"	"28.000"	"0.594132112862647"	"20"	"0"	"0.003183"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"625.35815"	"1249.70903"	"1249.71020"	"-0.94"	"-0.00059"	"7/82"	"7"	"82"	"3111555.69445801"	"HCD"	"MS2"	"5.604482"	"138.0"	"100.000"	"44.0066"	"12900"	"12900"	"12881"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"238.6"	""	"177.9"	""	"182.4"	""	"279.0"	"0.3"	"207.3"	"218.7"	""	"715"	"20"	"35.000"	"28.000"	"0.359150145024526"	"21"	"0.007213"	"0.08282"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"625.35822"	"1249.70915"	"1249.71020"	"-0.84"	"-0.00052"	"8/82"	"8"	"82"	"16586638.5527954"	"HCD"	"MS2"	"0"	"469.1"	"98.825"	"42.2174"	"12173"	"12173"	"12156"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"852.9"	""	"703.2"	""	"586.5"	""	"1028.4"	"2.8"	"606.2"	"644.9"	""	"715"	"25"	"35.000"	"28.000"	"0.121136785819765"	"23"	"0"	"0.002473"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"417.24124"	"1249.70917"	"1249.71020"	"-0.83"	"-0.00034"	"10/82"	"10"	"82"	"2007515.19586182"	"HCD"	"MS2"	"47.2804"	"48.4"	"100.000"	"43.6900"	"12772"	"12772"	"12754"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.0"	""	"68.2"	""	"64.1"	""	"83.3"	"1.4"	"85.0"	"86.7"	""	"715"	"27"	"35.000"	"28.000"	"0.0759059895165078"	"17"	"0.004942"	"0.0541"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"417.24127"	"1249.70926"	"1249.71020"	"-0.75"	"-0.00031"	"9/82"	"9"	"82"	"4863543.37896729"	"HCD"	"MS2"	"6.700439"	"66.3"	"100.000"	"42.2569"	"12178"	"12178"	"12159"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"108.4"	""	"87.3"	""	"87.2"	""	"126.0"	""	"115.5"	"106.7"	""	"715"	"31"	"35.000"	"28.000"	"0.0268705184611508"	"21"	"0.004942"	"0.05487"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"625.35828"	"1249.70928"	"1249.71020"	"-0.74"	"-0.00046"	"8/82"	"8"	"82"	"17874390.9262695"	"HCD"	"MS2"	"0"	"379.9"	"73.579"	"42.3534"	"12218"	"12218"	"12201"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"713.3"	""	"564.7"	""	"485.2"	""	"823.3"	"1.5"	"459.7"	"533.3"	""	"715"	"25"	"35.000"	"28.000"	"0.125393794938043"	"22"	"0.0001301"	"0.00428"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"625.35828"	"1249.70928"	"1249.71020"	"-0.74"	"-0.00046"	"8/82"	"8"	"82"	"17446093.1207886"	"HCD"	"MS2"	"0"	"341.4"	"65.459"	"43.1328"	"12547"	"12547"	"12531"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"623.8"	""	"509.9"	""	"456.7"	""	"713.8"	""	"441.8"	"478.2"	""	"715"	"26"	"35.000"	"28.000"	"0.0820873141700169"	"22"	"0"	"0.003444"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"417.24130"	"1249.70935"	"1249.71020"	"-0.68"	"-0.00028"	"9/82"	"9"	"82"	"8561032.48028564"	"HCD"	"MS2"	"2.72484"	"90.6"	"100.000"	"42.5396"	"12294"	"12294"	"12277"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"144.8"	""	"133.7"	""	"115.7"	""	"179.6"	""	"129.2"	"154.0"	""	"715"	"29"	"35.000"	"28.000"	"0.0455277351463456"	"20"	"0.001134"	"0.01393"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.8214"	"0.0000"	"1"	"1"	"1"	"417.24133"	"1249.70945"	"1249.71020"	"-0.61"	"-0.00025"	"9/82"	"9"	"82"	"2287652.02032471"	"HCD"	"MS2"	"0"	"52.7"	"100.000"	"43.7160"	"12773"	"12773"	"12762"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"79.8"	""	"80.5"	""	"65.0"	""	"91.5"	""	"95.7"	"90.1"	""	"715"	"28"	"35.000"	"28.000"	"0.0526351719619697"	"19"	"0.005617"	"0.06357"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.8214"	"0.0000"	"1"	"1"	"1"	"417.24133"	"1249.70945"	"1249.71020"	"-0.61"	"-0.00025"	"10/82"	"10"	"82"	"4159352.36956787"	"HCD"	"MS2"	"6.141702"	"66.6"	"100.000"	"43.3838"	"12638"	"12638"	"12618"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.9"	""	"89.5"	""	"91.7"	""	"121.1"	""	"119.3"	"117.6"	""	"715"	"28"	"35.000"	"28.000"	"0.057316022717169"	"20"	"0.006834"	"0.0797"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"625.35840"	"1249.70952"	"1249.71020"	"-0.55"	"-0.00034"	"14/82"	"14"	"82"	"2587600.46838379"	"HCD"	"MS2"	"11.67252"	"103.4"	"100.000"	"42.0522"	"12095"	"12095"	"12065"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"166.7"	""	"135.4"	""	"132.1"	""	"207.6"	"0.8"	"178.4"	"157.2"	""	"715"	"22"	"35.000"	"28.000"	"0.240035814921028"	"22"	"0"	"0.002629"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"625.35846"	"1249.70964"	"1249.71020"	"-0.45"	"-0.00028"	"7/82"	"7"	"82"	"1671071.04553223"	"HCD"	"MS2"	"34.08667"	"91.7"	"100.000"	"44.3142"	"13022"	"13022"	"13005"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"141.4"	""	"122.5"	""	"107.1"	""	"169.3"	""	"162.4"	"172.1"	""	"713"	"11"	"35.000"	"28.000"	"2.64886322660174"	"19"	"0.006189"	"0.07063"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"625.35846"	"1249.70964"	"1249.71020"	"-0.45"	"-0.00028"	"9/82"	"9"	"82"	"2002858.15167236"	"HCD"	"MS2"	"32.15487"	"99.6"	"100.000"	"44.3426"	"13022"	"13022"	"13003"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"164.3"	""	"137.6"	""	"128.6"	""	"193.5"	""	"153.0"	"170.5"	""	"713"	"13"	"35.000"	"28.000"	"1.73803906721857"	"20"	"0.007413"	"0.08885"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"625.35846"	"1249.70964"	"1249.71020"	"-0.45"	"-0.00028"	"7/82"	"7"	"82"	"29220785.6972656"	"HCD"	"MS2"	"0"	"406.3"	"47.989"	"42.5255"	"12299"	"12299"	"12284"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"727.1"	""	"601.1"	""	"537.3"	""	"866.9"	""	"524.0"	"576.8"	""	"713"	"22"	"35.000"	"28.000"	"0.216800127955863"	"24"	"0.0001301"	"0.004123"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"625.35852"	"1249.70976"	"1249.71020"	"-0.35"	"-0.00022"	"8/82"	"8"	"82"	"25230859.6210938"	"HCD"	"MS2"	"0"	"385.7"	"48.899"	"42.9491"	"12461"	"12461"	"12444"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"692.9"	""	"552.4"	""	"511.4"	""	"803.4"	""	"518.9"	"562.2"	""	"713"	"23"	"35.000"	"28.000"	"0.174606149104851"	"22"	"0"	"0.003668"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"625.35852"	"1249.70976"	"1249.71020"	"-0.35"	"-0.00022"	"8/82"	"8"	"82"	"34110801.8652344"	"HCD"	"MS2"	"0"	"413.3"	"37.256"	"42.8223"	"12420"	"12420"	"12403"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"747.6"	""	"589.3"	""	"519.1"	""	"850.5"	""	"558.6"	"639.4"	""	"713"	"27"	"35.000"	"28.000"	"0.0701551462280491"	"24"	"0"	"0.002288"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"625.35858"	"1249.70989"	"1249.71020"	"-0.25"	"-0.00016"	"14/82"	"14"	"82"	"3433294.628479"	"HCD"	"MS2"	"0"	"131.8"	"100.000"	"41.9276"	"12054"	"12054"	"12028"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"211.7"	""	"191.2"	""	"169.6"	""	"264.1"	"0.8"	"214.9"	"193.7"	""	"713"	"23"	"35.000"	"28.000"	"0.193668743177053"	"22"	"0"	"0.002056"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"625.35864"	"1249.71001"	"1249.71020"	"-0.15"	"-0.00010"	"13/82"	"13"	"82"	"30618378.9176025"	"HCD"	"MS2"	"0"	"336.2"	"36.825"	"42.6500"	"12339"	"12339"	"12322"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"577.5"	""	"510.2"	""	"429.6"	""	"740.0"	"0.6"	"432.5"	"481.4"	""	"711"	"25"	"35.000"	"28.000"	"0.110876524714539"	"24"	"0"	"0.002589"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"625.35876"	"1249.71025"	"1249.71020"	"0.04"	"0.00003"	"12/82"	"12"	"82"	"15453257.4279175"	"HCD"	"MS2"	"0"	"374.9"	"83.243"	"43.2619"	"12589"	"12589"	"12572"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"693.2"	""	"568.3"	""	"473.1"	""	"790.1"	""	"489.6"	"523.1"	""	"697"	"24"	"35.000"	"28.000"	"0.132191272263328"	"24"	"0.0001301"	"0.003883"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIEDSIK"	"[K].sIEDSIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"625.37280"	"1249.73833"	"1249.74039"	"-1.65"	"-0.00103"	"12/56"	"12"	"56"	"6709674.50311279"	"HCD"	"MS2"	"0"	"472.3"	"100.000"	"54.6685"	"17240"	"17240"	"17224"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"612.6"	""	"592.8"	""	"640.1"	""	"815.7"	"3.6"	"826.4"	"986.2"	""	"695"	"39"	"35.000"	"28.000"	"0.00414910866301335"	""	"0.00379"	"0.03896"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DVVTETK"	"[R].dVVTETk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QYV0"	"Disintegrin and metalloproteinase domain-containing protein 15 OS=Rattus norvegicus OX=10116 GN=Adam15 PE=2 SV=2"	"Q9QYV0"	"Disintegrin and metalloproteinase domain-containing protein 15 OS=Rattus norvegicus OX=10116 GN=Adam15 PE=2 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"625.37292"	"1249.73857"	"1249.74039"	"-1.45"	"-0.00091"	"8/58"	"8"	"58"	"761524.997314453"	"HCD"	"MS2"	"24.69643"	"71.3"	"100.000"	"40.7889"	"11582"	"11582"	"11557"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"69.7"	""	"71.3"	""	"78.6"	""	"141.4"	""	"163.1"	"160.2"	""	"644"	"17"	"35.000"	"28.000"	"0.596837182739569"	"17"	"0.004431"	"0.04635"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIEDSIK"	"[K].sIEDSIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.4333"	"0.0000"	"1"	"1"	"1"	"625.37335"	"1249.73943"	"1249.74039"	"-0.77"	"-0.00048"	"6/56"	"6"	"56"	"3358974.87902832"	"HCD"	"MS2"	"14.60202"	"294.0"	"100.000"	"54.9568"	"17356"	"17356"	"17345"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"354.8"	""	"353.5"	""	"379.5"	""	"453.7"	""	"575.7"	"681.7"	""	"634"	"30"	"35.000"	"28.000"	"0.0322150835640011"	""	"0.00447"	"0.04679"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIEDSIK"	"[K].sIEDSIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.3514"	"0.0000"	"1"	"1"	"1"	"625.37347"	"1249.73967"	"1249.74039"	"-0.57"	"-0.00036"	"12/56"	"12"	"56"	"6659850.09265137"	"HCD"	"MS2"	"0"	"464.0"	"100.000"	"54.9068"	"17324"	"17324"	"17309"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"610.0"	""	"593.3"	""	"619.7"	""	"771.2"	"6.3"	"817.3"	"981.3"	""	"634"	"37"	"35.000"	"28.000"	"0.00609620078064521"	""	"0.003581"	"0.03738"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASTEADK"	"[R].aASTEADk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P42676; P24155"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1;Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P42676; P24155"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1; Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"625.85242"	"1250.69756"	"1250.69925"	"-1.36"	"-0.00085"	"7/64"	"7"	"64"	"835040.149291992"	"HCD"	"MS2"	"0"	"66.1"	"100.000"	"24.8984"	"5149"	"5149"	"5135"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"84.7"	""	"77.4"	""	"87.7"	""	"122.7"	""	"134.6"	"124.6"	""	"815"	"54"	"36.000"	"29.000"	"0.000155284323032963"	""	"0"	"0.001401"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASTEADK"	"[R].aASTEADk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P42676; P24155"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1;Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P42676; P24155"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1; Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"625.85254"	"1250.69780"	"1250.69925"	"-1.16"	"-0.00073"	"14/64"	"14"	"64"	"896496.481628418"	"HCD"	"MS2"	"0"	"70.6"	"100.000"	"24.9700"	"5163"	"5163"	"5142"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.5"	""	"67.6"	""	"89.3"	""	"120.0"	"0.4"	"161.3"	"142.1"	""	"821"	"55"	"36.000"	"29.000"	"0.000120590518213021"	"26"	"0"	"0.001054"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQSTVEK"	"[R].tQSTVEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63060"	"Glycerol kinase OS=Rattus norvegicus OX=10116 GN=Gk PE=2 SV=1"	"Q63060"	"Glycerol kinase OS=Rattus norvegicus OX=10116 GN=Gk PE=2 SV=1"	"0"	"2"	"2"	"0.5366"	"0.0000"	"1"	"1"	"1"	"625.87079"	"1250.73430"	"1250.73564"	"-1.07"	"-0.00067"	"6/68"	"6"	"68"	"876826.794250488"	"HCD"	"MS2"	"13.94519"	"73.8"	"100.000"	"27.8176"	"6332"	"6332"	"6305"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"124.6"	""	"87.4"	""	"86.4"	""	"117.9"	""	"151.9"	"131.9"	""	"575"	"41"	"34.000"	"27.000"	"0.00224201156775437"	""	"0.001134"	"0.01394"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENSITTK"	"[K].eNSITTk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q80ZG5"	"Pre-mRNA-splicing factor SLU7 OS=Rattus norvegicus OX=10116 GN=Slu7 PE=1 SV=2"	"Q80ZG5"	"Pre-mRNA-splicing factor SLU7 OS=Rattus norvegicus OX=10116 GN=Slu7 PE=1 SV=2"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"625.87152"	"1250.73577"	"1250.73564"	"0.10"	"0.00006"	"5/68"	"5"	"68"	"627497.06060791"	"HCD"	"MS2"	"19.80529"	"68.2"	"100.000"	"34.9769"	"9225"	"9225"	"9199"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.9"	""	"69.8"	""	"82.7"	""	"111.5"	"1.3"	"154.1"	"142.4"	""	"536"	"13"	"34.000"	"27.000"	"1.4967001218947"	"20"	"0.008187"	"0.09982"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDNEFDQR"	"[R].vDNEFDQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"626.31140"	"1251.61553"	"1251.61670"	"-0.93"	"-0.00058"	"6/74"	"6"	"74"	"1134845.54711914"	"HCD"	"MS2"	"36.94294"	"72.9"	"100.000"	"40.5583"	"11498"	"11498"	"11475"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.0"	""	"73.3"	""	"85.0"	""	"118.1"	"1.8"	"163.9"	"160.0"	""	"480"	"18"	"33.000"	"26.000"	"0.376887073040052"	"19"	"0.00447"	"0.04668"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIEEESLR"	"[R].fIEEESLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"D4A770"	"Protein C12orf4 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"D4A770"	"Protein C12orf4 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"626.34235"	"1251.67742"	"1251.67823"	"-0.65"	"-0.00041"	"6/62"	"6"	"62"	"468018.270507813"	"HCD"	"MS2"	"8.009535"	"29.7"	"100.000"	"65.9830"	"21806"	"21806"	"21780"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.9"	""	"29.5"	""	"45.9"	""	"52.8"	""	"54.6"	"63.0"	""	"789"	"19"	"35.000"	"28.000"	"0.518856196299838"	"20"	"0.002973"	"0.02922"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIEEESLR"	"[R].fIEEESLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"D4A770"	"Protein C12orf4 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"D4A770"	"Protein C12orf4 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"626.34259"	"1251.67790"	"1251.67823"	"-0.26"	"-0.00016"	"6/62"	"6"	"62"	"439604.788146973"	"HCD"	"MS2"	"7.932282"	"30.7"	"100.000"	"66.0677"	"21825"	"21825"	"21801"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.7"	""	"34.8"	""	"49.4"	""	"52.1"	"0.4"	"48.7"	"58.8"	""	"785"	"15"	"35.000"	"28.000"	"1.21853963834038"	"18"	"0.003449"	"0.03517"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESESVDK"	"[K].eSESVDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"626.34363"	"1251.67998"	"1251.68327"	"-2.63"	"-0.00164"	"6/58"	"6"	"58"	"2629791.75537109"	"HCD"	"MS2"	"15.73194"	"202.7"	"100.000"	"28.8546"	"6752"	"6752"	"6735"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"326.3"	""	"170.2"	""	"184.3"	""	"371.9"	""	"436.4"	"438.0"	""	"785"	"29"	"35.000"	"28.000"	"0.0553145853380586"	"26"	"0.005617"	"0.06406"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESESVDK"	"[K].eSESVDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"1"	"626.34412"	"1251.68096"	"1251.68327"	"-1.85"	"-0.00116"	"6/58"	"6"	"58"	"3282320.19812012"	"HCD"	"MS2"	"0"	"239.9"	"100.000"	"28.9404"	"6774"	"6774"	"6751"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"396.9"	""	"212.6"	""	"204.4"	""	"416.7"	""	"520.9"	"529.1"	""	"797"	"32"	"36.000"	"29.000"	"0.0225127384462703"	""	"0.005183"	"0.05874"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESATEEK"	"[K].eSATEEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"0"	"2"	"2"	"0.3810"	"0.0000"	"1"	"1"	"1"	"626.34418"	"1251.68108"	"1251.68327"	"-1.75"	"-0.00109"	"6/58"	"6"	"58"	"1100192.40313721"	"HCD"	"MS2"	"0"	"89.6"	"100.000"	"24.7012"	"5070"	"5070"	"5049"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.5"	""	"89.5"	""	"94.2"	""	"189.5"	""	"197.4"	"182.2"	""	"797"	"21"	"36.000"	"29.000"	"0.329176122906506"	"27"	"0.00736"	"0.08499"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMDAALK"	"[K].emDAALk.[E]"	"N-Term(TMT6plex); M2(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"626.35571"	"1251.70415"	"1251.70190"	"1.80"	"0.00113"	"5/52"	"5"	"52"	"1357843.23614502"	"HCD"	"MS2"	"0"	"101.2"	"100.000"	"37.3570"	"10197"	"10197"	"10183"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"144.8"	""	"135.3"	""	"105.5"	""	"168.1"	""	"205.9"	"203.6"	""	"687"	"25"	"35.000"	"28.000"	"0.100444634178919"	"28"	"0.007018"	"0.08188"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISEIEYR"	"[R].lISEIEYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"626.36005"	"1251.71282"	"1251.71462"	"-1.44"	"-0.00090"	"6/62"	"6"	"62"	"1419830.92388916"	"HCD"	"MS2"	"2.902935"	"65.9"	"100.000"	"78.8887"	"27036"	"27036"	"27022"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.0"	""	"94.4"	""	"116.9"	""	"80.3"	"2.5"	"116.9"	"118.0"	""	"661"	"32"	"35.000"	"28.000"	"0.0197320162215958"	"19"	"0.0003538"	"0.006178"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISEIEYR"	"[R].lISEIEYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"626.36029"	"1251.71330"	"1251.71462"	"-1.05"	"-0.00066"	"6/62"	"6"	"62"	"609993.436889648"	"HCD"	"MS2"	"46.17404"	"30.2"	"100.000"	"78.5938"	"26918"	"26918"	"26898"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.5"	""	"46.5"	""	"52.5"	""	"38.6"	""	"54.1"	"55.0"	""	"677"	"30"	"35.000"	"28.000"	"0.031373189521391"	"17"	"0.000936"	"0.01329"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISEIEYR"	"[R].lISEIEYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"626.36060"	"1251.71391"	"1251.71462"	"-0.56"	"-0.00035"	"6/62"	"6"	"62"	"594130.22833252"	"HCD"	"MS2"	"31.55853"	"31.3"	"100.000"	"78.6306"	"26928"	"26928"	"26906"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.6"	""	"40.6"	""	"48.1"	""	"49.7"	""	"54.6"	"61.3"	""	"679"	"31"	"35.000"	"28.000"	"0.0302579693496406"	"18"	"0"	"0.003669"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISEIEYR"	"[R].lISEIEYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"626.36090"	"1251.71453"	"1251.71462"	"-0.07"	"-0.00005"	"6/62"	"6"	"62"	"1166742.25732422"	"HCD"	"MS2"	"3.480729"	"55.7"	"100.000"	"78.9465"	"27055"	"27055"	"27039"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"81.3"	""	"83.4"	""	"89.5"	""	"87.1"	"0.1"	"93.1"	"92.6"	""	"596"	"29"	"34.000"	"27.000"	"0.0345315652134227"	"16"	"0.0002479"	"0.005219"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAANNYAR"	"[K].eDAANNYAR.[G]"	"N-Term(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"626.80890"	"1252.61052"	"1252.61194"	"-1.14"	"-0.00071"	"7/74"	"7"	"74"	"4721197.48254395"	"HCD"	"MS2"	"0"	"215.3"	"100.000"	"25.4058"	"5354"	"5354"	"5329"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"376.2"	""	"229.1"	""	"254.6"	""	"379.4"	""	"416.8"	"387.3"	""	"478"	"41"	"33.000"	"26.000"	"0.00182136883396074"	""	"0"	"0.0006954"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAANNYAR"	"[K].eDAANNYAR.[G]"	"N-Term(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.6585"	"0.0000"	"1"	"1"	"1"	"626.80939"	"1252.61150"	"1252.61194"	"-0.36"	"-0.00022"	"7/74"	"7"	"74"	"4593660.41687012"	"HCD"	"MS2"	"0"	"219.5"	"100.000"	"25.4956"	"5376"	"5376"	"5349"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"387.7"	""	"226.5"	""	"246.8"	""	"364.8"	""	"458.2"	"399.5"	""	"468"	"41"	"33.000"	"26.000"	"0.00181641825291114"	""	"0"	"0.0003998"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIYSEELR"	"[K].nIYSEELR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"626.83972"	"1252.67217"	"1252.67348"	"-1.05"	"-0.00066"	"5/74"	"5"	"74"	"2404236.76153564"	"HCD"	"MS2"	"16.29885"	"118.4"	"100.000"	"50.8334"	"15677"	"15677"	"15651"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"84.6"	""	"98.7"	""	"73.0"	""	"218.7"	""	"291.1"	"369.5"	""	"739"	"31"	"35.000"	"28.000"	"0.0325547558576461"	"24"	"0.0002479"	"0.006059"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIYSEELR"	"[K].nIYSEELR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"626.84003"	"1252.67278"	"1252.67348"	"-0.56"	"-0.00035"	"5/74"	"5"	"74"	"2464871.12475586"	"HCD"	"MS2"	"7.495281"	"121.8"	"100.000"	"51.1701"	"15803"	"15803"	"15778"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"93.4"	""	"111.7"	""	"80.9"	""	"217.9"	""	"291.6"	"370.7"	""	"738"	"33"	"35.000"	"28.000"	"0.0182821120406968"	"24"	"0.0003538"	"0.007009"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YENELSLR"	"[R].yENELSLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"626.84015"	"1252.67302"	"1252.67348"	"-0.37"	"-0.00023"	"6/74"	"6"	"74"	"7018250.64447021"	"HCD"	"MS2"	"11.513"	"364.9"	"100.000"	"58.0287"	"18609"	"18609"	"18591"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"596.2"	""	"514.9"	""	"469.6"	""	"571.4"	""	"638.0"	"671.8"	""	"717"	"37"	"35.000"	"28.000"	"0.00716950480263339"	"21"	"0.0007829"	"0.009404"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YENELSLR"	"[R].yENELSLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"626.84027"	"1252.67327"	"1252.67348"	"-0.17"	"-0.00011"	"6/74"	"6"	"74"	"6372339.34124756"	"HCD"	"MS2"	"11.76126"	"341.0"	"100.000"	"58.2174"	"18672"	"18672"	"18655"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"553.0"	""	"462.0"	""	"468.8"	""	"537.6"	""	"617.8"	"588.5"	""	"717"	"37"	"35.000"	"28.000"	"0.00683107667389824"	"23"	"0.0006732"	"0.008911"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIYSEELR"	"[K].nIYSEELR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.5484"	"0.0000"	"1"	"1"	"1"	"626.84033"	"1252.67339"	"1252.67348"	"-0.08"	"-0.00005"	"5/74"	"5"	"74"	"5956344.78039551"	"HCD"	"MS2"	"0"	"249.6"	"100.000"	"51.4858"	"15932"	"15932"	"15915"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"167.8"	""	"199.9"	""	"122.4"	""	"439.3"	""	"644.0"	"818.6"	""	"703"	"31"	"35.000"	"28.000"	"0.0291021670544885"	""	"0.0008629"	"0.01031"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIYSEELR"	"[K].nIYSEELR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.5161"	"0.0000"	"1"	"1"	"1"	"626.84039"	"1252.67351"	"1252.67348"	"0.02"	"0.00001"	"5/74"	"5"	"74"	"6583658.36968994"	"HCD"	"MS2"	"0.2804407"	"283.7"	"100.000"	"51.1349"	"15800"	"15800"	"15783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"193.1"	""	"209.9"	""	"158.4"	""	"495.8"	""	"738.8"	"921.5"	""	"701"	"31"	"35.000"	"28.000"	"0.0286871908241244"	""	"0.000936"	"0.01177"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VILGAHEER"	"[K].vILGAHEER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"418.24481"	"1252.71988"	"1252.72110"	"-0.97"	"-0.00041"	"7/66"	"7"	"66"	"10353862.9384155"	"HCD"	"MS2"	"3.916397"	"131.9"	"57.635"	"33.0346"	"8446"	"8446"	"8427"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"175.2"	""	"189.9"	""	"197.8"	""	"198.4"	"0.7"	"245.3"	"242.8"	""	"613"	"39"	"34.000"	"27.000"	"0.00410610904696049"	"18"	"0"	"0.0007377"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASANMDLMR"	"[K].aSANmDLMR.[A]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.31177"	"1253.61626"	"1253.61796"	"-1.36"	"-0.00085"	"7/82"	"7"	"82"	"1315986.04418945"	"HCD"	"MS2"	"16.71896"	"82.0"	"100.000"	"34.5478"	"9057"	"9057"	"9031"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"121.9"	""	"113.3"	""	"117.1"	""	"115.1"	"1.7"	"165.5"	"142.4"	""	"458"	"29"	"33.000"	"26.000"	"0.0293653703428229"	"14"	"0.003111"	"0.03171"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASANMDLMR"	"[K].aSANmDLMR.[A]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.31207"	"1253.61687"	"1253.61796"	"-0.87"	"-0.00054"	"7/82"	"7"	"82"	"1066473.55621338"	"HCD"	"MS2"	"15.35629"	"66.9"	"100.000"	"34.6366"	"9087"	"9087"	"9060"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"95.2"	""	"89.2"	""	"97.0"	""	"102.5"	""	"127.3"	"123.2"	""	"467"	"27"	"33.000"	"26.000"	"0.0509667434415341"	"14"	"0.003922"	"0.03948"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMELIYAR"	"[R].eMELIYAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"627.34113"	"1253.67497"	"1253.67612"	"-0.92"	"-0.00058"	"6/60"	"6"	"60"	"778734.63470459"	"HCD"	"MS2"	"5.693842"	"44.9"	"100.000"	"73.2421"	"24762"	"24762"	"24743"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"72.6"	""	"75.5"	""	"68.5"	""	"43.4"	"0.1"	"88.0"	"77.3"	""	"683"	"40"	"35.000"	"28.000"	"0.00347848959020481"	"20"	"0.0001301"	"0.003892"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMELIYAR"	"[R].eMELIYAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"627.34137"	"1253.67546"	"1253.67612"	"-0.53"	"-0.00033"	"6/60"	"6"	"60"	"805707.083068848"	"HCD"	"MS2"	"2.902306"	"45.2"	"100.000"	"73.3704"	"24801"	"24801"	"24780"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"74.5"	""	"72.7"	""	"73.1"	""	"54.8"	""	"78.7"	"76.9"	""	"689"	"45"	"35.000"	"28.000"	"0.00121671601993329"	"26"	"0"	"0.001393"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMELIYAR"	"[R].eMELIYAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"627.34174"	"1253.67620"	"1253.67612"	"0.06"	"0.00004"	"6/60"	"6"	"60"	"1458983.29003906"	"HCD"	"MS2"	"5.774812"	"72.6"	"100.000"	"73.0637"	"24677"	"24677"	"24654"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"126.3"	""	"108.8"	""	"124.6"	""	"76.1"	""	"126.1"	"125.5"	""	"677"	"35"	"35.000"	"28.000"	"0.011469874685312"	"26"	"0.0001301"	"0.00486"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMELIYAR"	"[R].eMELIYAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"627.34174"	"1253.67620"	"1253.67612"	"0.06"	"0.00004"	"6/60"	"6"	"60"	"1513883.97241211"	"HCD"	"MS2"	"4.679307"	"74.5"	"100.000"	"72.9332"	"24638"	"24638"	"24621"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"128.6"	""	"113.8"	""	"131.5"	""	"81.7"	"1.2"	"120.9"	"125.8"	""	"677"	"42"	"35.000"	"28.000"	"0.00239088492118013"	"24"	"0"	"0.003114"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMEEASK"	"[K].tMEEASk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K1Q0"	"Glycylpeptide N-tetradecanoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nmt1 PE=1 SV=1"	"Q8K1Q0"	"Glycylpeptide N-tetradecanoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"627.34351"	"1253.67974"	"1253.68116"	"-1.14"	"-0.00071"	"6/58"	"6"	"58"	"1383739.55780029"	"HCD"	"MS2"	"0"	"127.3"	"100.000"	"32.3984"	"8181"	"8181"	"8154"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"198.7"	""	"163.2"	""	"164.4"	""	"168.5"	""	"246.7"	"268.1"	""	"653"	"31"	"35.000"	"28.000"	"0.0252861776982522"	"23"	"0.003717"	"0.03838"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMEEASK"	"[K].tMEEASk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K1Q0"	"Glycylpeptide N-tetradecanoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nmt1 PE=1 SV=1"	"Q8K1Q0"	"Glycylpeptide N-tetradecanoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"627.34387"	"1253.68047"	"1253.68116"	"-0.55"	"-0.00035"	"6/58"	"6"	"58"	"1353490.3414917"	"HCD"	"MS2"	"0"	"120.2"	"100.000"	"32.4071"	"8191"	"8191"	"8164"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"180.0"	""	"151.1"	""	"159.5"	""	"154.0"	""	"259.7"	"237.8"	""	"688"	"19"	"35.000"	"28.000"	"0.394964845794928"	"19"	"0.008668"	"0.1104"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQAAEHTLR"	"[K].vQAAEHTLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7A4"	"Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus OX=10116 GN=Uba5 PE=1 SV=1"	"Q5M7A4"	"Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus OX=10116 GN=Uba5 PE=1 SV=1"	"0"	"3"	"3"	"0.9825"	"0.0000"	"1"	"1"	"1"	"418.57651"	"1253.71497"	"1253.71635"	"-1.10"	"-0.00046"	"8/82"	"8"	"82"	"5057071.3347168"	"HCD"	"MS2"	"29.39912"	"126.4"	"100.000"	"28.7727"	"6706"	"6706"	"6687"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"188.5"	""	"175.6"	""	"178.3"	""	"200.5"	""	"223.1"	"239.3"	""	"507"	"57"	"34.000"	"27.000"	"5.28418438865162E-05"	"17"	"0"	"0.0004087"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQAAEHTLR"	"[K].vQAAEHTLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7A4"	"Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus OX=10116 GN=Uba5 PE=1 SV=1"	"Q5M7A4"	"Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus OX=10116 GN=Uba5 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"627.36127"	"1253.71526"	"1253.71635"	"-0.87"	"-0.00055"	"11/82"	"11"	"82"	"440464.291870117"	"HCD"	"MS2"	"40.8619"	"38.8"	"100.000"	"28.7543"	"6699"	"6699"	"6674"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.0"	""	"44.7"	""	"44.9"	""	"76.1"	"0.3"	"81.0"	"67.6"	""	"507"	"17"	"34.000"	"27.000"	"0.48975396836379"	"17"	"0.001211"	"0.01539"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQAAEHTLR"	"[K].vQAAEHTLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7A4"	"Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus OX=10116 GN=Uba5 PE=1 SV=1"	"Q5M7A4"	"Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus OX=10116 GN=Uba5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"418.57681"	"1253.71588"	"1253.71635"	"-0.37"	"-0.00016"	"8/82"	"8"	"82"	"4878442.8470459"	"HCD"	"MS2"	"30.4875"	"126.3"	"100.000"	"28.7264"	"6700"	"6700"	"6686"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"179.0"	""	"170.7"	""	"172.5"	""	"200.3"	"0.5"	"241.5"	"232.6"	""	"485"	"53"	"33.000"	"26.000"	"0.000109323050851304"	"16"	"0"	"0.0002699"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPEGSVIPR"	"[K].aVPEGSVIPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"627.37427"	"1253.74126"	"1253.74150"	"-0.19"	"-0.00012"	"7/76"	"7"	"76"	"2367569.42950439"	"HCD"	"MS2"	"6.193139"	"84.5"	"100.000"	"53.7861"	"16882"	"16882"	"16860"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"131.9"	""	"114.3"	""	"127.2"	""	"143.0"	""	"141.7"	"146.7"	""	"431"	"39"	"33.000"	"26.000"	"0.00283430951337427"	"21"	"0"	"0.0005915"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPEGSVIPR"	"[K].aVPEGSVIPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"627.37427"	"1253.74126"	"1253.74150"	"-0.19"	"-0.00012"	"7/76"	"7"	"76"	"2325926.3996582"	"HCD"	"MS2"	"0"	"85.9"	"100.000"	"54.0488"	"16978"	"16978"	"16960"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"132.1"	""	"118.7"	""	"134.0"	""	"132.6"	""	"145.2"	"155.2"	""	"431"	"42"	"33.000"	"26.000"	"0.00139780720429645"	"20"	"0"	"0.001081"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPEGSVIPR"	"[K].aVPEGSVIPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"627.37427"	"1253.74126"	"1253.74150"	"-0.19"	"-0.00012"	"7/76"	"7"	"76"	"3532429.19384766"	"HCD"	"MS2"	"2.882085"	"119.7"	"100.000"	"54.3714"	"17106"	"17106"	"17088"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"174.6"	""	"159.1"	""	"185.6"	""	"194.8"	""	"221.3"	"205.3"	""	"431"	"40"	"33.000"	"26.000"	"0.00198814142551851"	"21"	"0"	"5.477E-05"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPEGSVIPR"	"[K].aVPEGSVIPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"627.37451"	"1253.74175"	"1253.74150"	"0.19"	"0.00012"	"7/76"	"7"	"76"	"4274147.72467041"	"HCD"	"MS2"	"2.179655"	"133.5"	"100.000"	"54.0852"	"17004"	"17004"	"16987"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"189.0"	""	"175.4"	""	"213.1"	""	"203.3"	""	"239.0"	"246.0"	""	"412"	"39"	"33.000"	"26.000"	"0.00262341634689432"	"20"	"0"	"0.0001191"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVESTSFAR"	"[R].eVESTSFAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64240"	"Protein AMBP OS=Rattus norvegicus OX=10116 GN=Ambp PE=1 SV=1"	"Q64240"	"Protein AMBP OS=Rattus norvegicus OX=10116 GN=Ambp PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"627.82898"	"1254.65068"	"1254.65275"	"-1.65"	"-0.00103"	"7/74"	"7"	"74"	"730851.491149902"	"HCD"	"MS2"	"0"	"52.9"	"100.000"	"39.3837"	"11019"	"11019"	"10991"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"64.6"	""	"71.2"	""	"62.0"	""	"107.5"	""	"97.3"	"102.8"	""	"648"	"26"	"35.000"	"28.000"	"0.0904784204560898"	"23"	"0"	"0.002769"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPELTPAER"	"[R].lPELTPAER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P43424"	"Galactose-1-phosphate uridylyltransferase OS=Rattus norvegicus OX=10116 GN=Galt PE=2 SV=1"	"P43424"	"Galactose-1-phosphate uridylyltransferase OS=Rattus norvegicus OX=10116 GN=Galt PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"627.86584"	"1254.72441"	"1254.72552"	"-0.88"	"-0.00055"	"9/74"	"9"	"74"	"410658.882507324"	"HCD"	"MS2"	"0"	"18.7"	"100.000"	"66.9985"	"22205"	"22205"	"22179"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.5"	""	"19.6"	""	"23.9"	""	"40.3"	"1.3"	"34.3"	"35.3"	""	"466"	"24"	"33.000"	"26.000"	"0.103599085320302"	"26"	"0.001134"	"0.01386"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIVQQPGER"	"[R].vIVQQPGER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.87158"	"1254.73589"	"1254.73675"	"-0.69"	"-0.00043"	"5/74"	"5"	"74"	"1616040.44055176"	"HCD"	"MS2"	"11.59552"	"79.3"	"100.000"	"39.5926"	"11104"	"11104"	"11080"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.1"	""	"127.5"	""	"117.4"	""	"109.9"	"1.1"	"130.4"	"151.0"	""	"376"	"30"	"32.000"	"25.000"	"0.0178713701207381"	"14"	"0.0008629"	"0.01012"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIVQQPGER"	"[R].vIVQQPGER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"627.87170"	"1254.73613"	"1254.73675"	"-0.49"	"-0.00031"	"4/74"	"4"	"74"	"1438098.91052246"	"HCD"	"MS2"	"34.11053"	"71.4"	"100.000"	"39.7589"	"11163"	"11163"	"11133"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.2"	""	"107.5"	""	"109.6"	""	"101.5"	"0.8"	"116.4"	"135.8"	""	"378"	"22"	"32.000"	"25.000"	"0.106527516951105"	"15"	"0.001465"	"0.01812"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIVQQPGER"	"[R].vIVQQPGER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.87244"	"1254.73760"	"1254.73675"	"0.67"	"0.00042"	"4/74"	"4"	"74"	"294338.151550293"	"HCD"	"MS2"	"46.20023"	"27.3"	"100.000"	"39.9123"	"11235"	"11235"	"11204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.6"	""	"32.7"	""	"37.1"	""	"38.2"	"1.1"	"65.8"	"48.5"	""	"374"	"3"	"32.000"	"25.000"	"9.09581474643034"	"13"	"0.00413"	"0.04534"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTTFEGGMR"	"[K].qTTFEGGMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32KJ6"	"N-acetylgalactosamine-6-sulfatase OS=Rattus norvegicus OX=10116 GN=Galns PE=1 SV=1"	"Q32KJ6"	"N-acetylgalactosamine-6-sulfatase OS=Rattus norvegicus OX=10116 GN=Galns PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"628.31885"	"1255.63042"	"1255.63024"	"0.14"	"0.00009"	"7/86"	"7"	"86"	"1308540.90869141"	"HCD"	"MS2"	"26.17361"	"89.2"	"100.000"	"37.6243"	"10298"	"10298"	"10284"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.4"	""	"122.1"	""	"119.5"	""	"139.5"	""	"153.5"	"186.7"	""	"537"	"26"	"34.000"	"27.000"	"0.0675996255103253"	"19"	"0"	"0.003145"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTTFEGGMR"	"[K].qTTFEGGMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32KJ6"	"N-acetylgalactosamine-6-sulfatase OS=Rattus norvegicus OX=10116 GN=Galns PE=1 SV=1"	"Q32KJ6"	"N-acetylgalactosamine-6-sulfatase OS=Rattus norvegicus OX=10116 GN=Galns PE=1 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"628.32202"	"1255.63677"	"1255.63024"	"5.20"	"0.00326"	"7/86"	"7"	"86"	"1276735.08148193"	"HCD"	"MS2"	"30.38487"	"88.0"	"100.000"	"37.4762"	"10244"	"10244"	"10227"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"129.7"	""	"109.1"	""	"125.0"	""	"142.0"	""	"134.0"	"195.6"	""	"523"	"29"	"34.000"	"27.000"	"0.030093430170897"	"17"	"0"	"0.001529"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFAAGYNVR"	"[K].eFAAGYNVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P36970"	"Phospholipid hydroperoxide glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx4 PE=1 SV=3"	"P36970"	"Phospholipid hydroperoxide glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx4 PE=1 SV=3"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"628.33429"	"1255.66130"	"1255.66325"	"-1.55"	"-0.00097"	"7/68"	"7"	"68"	"1282245.09570313"	"HCD"	"MS2"	"12.22879"	"69.7"	"100.000"	"52.0623"	"16178"	"16178"	"16158"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.1"	""	"95.6"	""	"106.1"	""	"112.7"	""	"123.8"	"120.8"	""	"529"	"40"	"34.000"	"27.000"	"0.0026147229353676"	"18"	"0"	"0.0008234"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFAAGYNVR"	"[K].eFAAGYNVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P36970"	"Phospholipid hydroperoxide glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx4 PE=1 SV=3"	"P36970"	"Phospholipid hydroperoxide glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx4 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"628.33459"	"1255.66191"	"1255.66325"	"-1.07"	"-0.00067"	"7/68"	"7"	"68"	"1358940.04754639"	"HCD"	"MS2"	"11.67842"	"74.5"	"100.000"	"52.3602"	"16288"	"16288"	"16272"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"111.9"	""	"106.0"	""	"125.4"	""	"113.6"	"0.4"	"122.9"	"124.3"	""	"527"	"39"	"34.000"	"27.000"	"0.00357092410154498"	"21"	"0"	"0.0004246"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFAAGYNVR"	"[K].eFAAGYNVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P36970"	"Phospholipid hydroperoxide glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx4 PE=1 SV=3"	"P36970"	"Phospholipid hydroperoxide glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx4 PE=1 SV=3"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"628.33582"	"1255.66435"	"1255.66325"	"0.88"	"0.00055"	"7/68"	"7"	"68"	"849844.835693359"	"HCD"	"MS2"	"21.7327"	"50.2"	"100.000"	"51.7496"	"16051"	"16051"	"16021"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.3"	""	"72.1"	""	"73.1"	""	"87.2"	""	"84.2"	"86.4"	""	"534"	"41"	"34.000"	"27.000"	"0.00223620318327878"	"22"	"0"	"0.001688"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFAAGYNVR"	"[K].eFAAGYNVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P36970"	"Phospholipid hydroperoxide glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx4 PE=1 SV=3"	"P36970"	"Phospholipid hydroperoxide glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx4 PE=1 SV=3"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"628.33832"	"1255.66936"	"1255.66325"	"4.86"	"0.00305"	"7/68"	"7"	"68"	"700685.994384766"	"HCD"	"MS2"	"0"	"44.9"	"100.000"	"52.0471"	"16161"	"16161"	"16133"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"71.2"	""	"61.5"	""	"66.8"	""	"72.3"	"0.6"	"76.8"	"75.8"	""	"533"	"39"	"34.000"	"27.000"	"0.00342528894874974"	"20"	"0.0001301"	"0.003913"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVAPDADAR"	"[K].lVVAPDADAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJM8"	"Zinc transporter 7 OS=Rattus norvegicus OX=10116 GN=Slc30a7 PE=2 SV=2"	"Q5BJM8"	"Zinc transporter 7 OS=Rattus norvegicus OX=10116 GN=Slc30a7 PE=2 SV=2"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"628.36163"	"1255.71599"	"1255.72077"	"-3.80"	"-0.00239"	"6/76"	"6"	"76"	"751563.048156738"	"HCD"	"MS2"	"0"	"41.0"	"100.000"	"55.2461"	"17461"	"17461"	"17431"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.0"	""	"60.0"	""	"52.4"	""	"56.9"	""	"82.7"	"80.4"	""	"516"	"32"	"34.000"	"27.000"	"0.015403510393863"	"25"	"0.0008629"	"0.01072"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVAPDADAR"	"[K].lVVAPDADAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJM8"	"Zinc transporter 7 OS=Rattus norvegicus OX=10116 GN=Slc30a7 PE=2 SV=2"	"Q5BJM8"	"Zinc transporter 7 OS=Rattus norvegicus OX=10116 GN=Slc30a7 PE=2 SV=2"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"628.36279"	"1255.71831"	"1255.72077"	"-1.96"	"-0.00123"	"6/76"	"6"	"76"	"747941.643920898"	"HCD"	"MS2"	"52.79551"	"41.6"	"100.000"	"55.0094"	"17378"	"17378"	"17352"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.8"	""	"59.5"	""	"54.9"	""	"60.4"	""	"78.9"	"89.0"	""	"507"	"31"	"34.000"	"27.000"	"0.0198142648463141"	"24"	"0"	"0.002069"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDADGPLAR"	"[R].lVDADGPLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"628.36334"	"1255.71941"	"1255.72077"	"-1.08"	"-0.00068"	"6/76"	"6"	"76"	"2129623.55072021"	"HCD"	"MS2"	"1.449646"	"97.3"	"100.000"	"63.7893"	"20918"	"20918"	"20901"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.2"	""	"100.8"	""	"137.1"	""	"160.0"	"13.6"	"208.1"	"201.7"	""	"493"	"36"	"33.000"	"26.000"	"0.0060369408911473"	"26"	"0"	"0.0001309"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDADGPLAR"	"[R].lVDADGPLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"628.36334"	"1255.71941"	"1255.72077"	"-1.08"	"-0.00068"	"10/76"	"10"	"76"	"2061372.6104126"	"HCD"	"MS2"	"36.12283"	"72.0"	"100.000"	"63.5012"	"20800"	"20800"	"20779"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"82.3"	""	"94.8"	""	"93.0"	""	"116.4"	""	"147.4"	"150.4"	""	"493"	"28"	"33.000"	"26.000"	"0.0373092847739526"	"23"	"0"	"0.0009003"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDADGPLAR"	"[R].lVDADGPLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"628.36359"	"1255.71990"	"1255.72077"	"-0.69"	"-0.00044"	"14/76"	"14"	"76"	"1914399.05291748"	"HCD"	"MS2"	"40.13636"	"67.3"	"100.000"	"63.6135"	"20831"	"20831"	"20811"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"72.4"	""	"87.1"	""	"90.7"	""	"121.4"	""	"129.9"	"142.8"	""	"491"	"27"	"33.000"	"26.000"	"0.0461372278525202"	"18"	"0"	"0.0003149"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAVDEYFR"	"[R].gAAVDEYFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4AE70"	"Histone-arginine methyltransferase CARM1 OS=Rattus norvegicus OX=10116 GN=Carm1 PE=1 SV=1"	"Q4AE70"	"Histone-arginine methyltransferase CARM1 OS=Rattus norvegicus OX=10116 GN=Carm1 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"628.82690"	"1256.64653"	"1256.64727"	"-0.59"	"-0.00037"	"6/66"	"6"	"66"	"1170621.05993652"	"HCD"	"MS2"	"5.838023"	"63.9"	"100.000"	"63.0657"	"20623"	"20623"	"20605"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.3"	""	"74.6"	""	"107.3"	""	"92.2"	"1.1"	"123.3"	"117.6"	""	"507"	"40"	"34.000"	"27.000"	"0.00243208060089289"	"20"	"0"	"0.0002902"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAVDEYFR"	"[R].gAAVDEYFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4AE70"	"Histone-arginine methyltransferase CARM1 OS=Rattus norvegicus OX=10116 GN=Carm1 PE=1 SV=1"	"Q4AE70"	"Histone-arginine methyltransferase CARM1 OS=Rattus norvegicus OX=10116 GN=Carm1 PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"628.82703"	"1256.64678"	"1256.64727"	"-0.39"	"-0.00025"	"7/66"	"7"	"66"	"1065070.78234863"	"HCD"	"MS2"	"4.83422"	"56.9"	"100.000"	"63.1155"	"20628"	"20628"	"20614"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.2"	""	"60.0"	""	"80.8"	""	"92.9"	"0.3"	"103.3"	"111.6"	""	"497"	"38"	"33.000"	"26.000"	"0.00382231428115304"	"20"	"0"	"0.000472"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQTSEFIR"	"[K].mQTSEFIR.[S]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"628.82922"	"1256.65117"	"1256.65064"	"0.42"	"0.00027"	"7/72"	"7"	"72"	"2761307.49609375"	"HCD"	"MS2"	"46.04558"	"116.1"	"100.000"	"40.5221"	"11474"	"11474"	"11457"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.1"	""	"104.4"	""	"101.4"	""	"277.6"	""	"270.6"	"248.7"	""	"526"	"13"	"34.000"	"27.000"	"1.43204197697557"	"13"	"0.002973"	"0.02849"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQTSEFIR"	"[K].mQTSEFIR.[S]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"628.82935"	"1256.65141"	"1256.65064"	"0.62"	"0.00039"	"8/72"	"8"	"72"	"2745758.14624023"	"HCD"	"MS2"	"47.76115"	"117.6"	"100.000"	"40.3331"	"11406"	"11406"	"11383"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"92.9"	""	"104.0"	""	"99.9"	""	"302.2"	""	"258.9"	"262.5"	""	"526"	"10"	"34.000"	"27.000"	"2.36567863942399"	"13"	"0.003449"	"0.03278"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFSSTESLR"	"[K].tFSSTESLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62839"	"Golgin subfamily A member 2 OS=Rattus norvegicus OX=10116 GN=Golga2 PE=1 SV=4"	"Q62839"	"Golgin subfamily A member 2 OS=Rattus norvegicus OX=10116 GN=Golga2 PE=1 SV=4"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"628.83728"	"1256.66728"	"1256.66840"	"-0.89"	"-0.00056"	"7/76"	"7"	"76"	"1266509.0826416"	"HCD"	"MS2"	"10.24114"	"78.0"	"100.000"	"44.5675"	"13113"	"13113"	"13091"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"96.4"	""	"83.6"	""	"96.1"	""	"139.6"	"1.5"	"143.4"	"179.9"	""	"567"	"19"	"34.000"	"27.000"	"0.352008429202449"	"16"	"0"	"0.003796"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFSSTESLR"	"[K].tFSSTESLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62839"	"Golgin subfamily A member 2 OS=Rattus norvegicus OX=10116 GN=Golga2 PE=1 SV=4"	"Q62839"	"Golgin subfamily A member 2 OS=Rattus norvegicus OX=10116 GN=Golga2 PE=1 SV=4"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"628.83752"	"1256.66777"	"1256.66840"	"-0.50"	"-0.00031"	"7/76"	"7"	"76"	"1362688.97491455"	"HCD"	"MS2"	"3.916381"	"86.1"	"100.000"	"44.4325"	"13070"	"13070"	"13048"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"93.5"	""	"96.8"	""	"108.1"	""	"155.7"	""	"155.3"	"209.3"	""	"565"	"20"	"34.000"	"27.000"	"0.31118485494545"	"16"	"0.001374"	"0.01714"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEVEEYFR"	"[K].gEVEEYFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"629.31879"	"1257.63030"	"1257.63128"	"-0.78"	"-0.00049"	"5/62"	"5"	"62"	"1959726.38702393"	"HCD"	"MS2"	"57.29902"	"119.4"	"100.000"	"64.1600"	"21068"	"21068"	"21049"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"165.2"	""	"142.1"	""	"165.3"	""	"191.7"	""	"228.3"	"243.7"	""	"423"	"14"	"33.000"	"26.000"	"0.865586295328973"	"20"	"0.001211"	"0.01532"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEVEEYFR"	"[K].gEVEEYFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"629.31897"	"1257.63066"	"1257.63128"	"-0.49"	"-0.00031"	"5/62"	"5"	"62"	"2034509.8895874"	"HCD"	"MS2"	"54.72918"	"116.8"	"100.000"	"64.2816"	"21103"	"21103"	"21083"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"157.9"	""	"144.7"	""	"155.4"	""	"194.4"	"2.0"	"232.9"	"220.6"	""	"424"	"11"	"33.000"	"26.000"	"1.55001485698485"	"21"	"0.0007829"	"0.009483"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTDFDEVR"	"[K].fTDFDEVR.[QH]"	"N-Term(TMT6plex)"	"1"	"2"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"629.31897"	"1257.63066"	"1257.63128"	"-0.49"	"-0.00031"	"12/64"	"12"	"64"	"2407984.62371826"	"HCD"	"MS2"	"29.94995"	"108.8"	"100.000"	"74.5673"	"25287"	"25287"	"25277"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"146.2"	""	"127.9"	""	"129.5"	""	"171.1"	"0.5"	"226.8"	"231.2"	""	"424"	"23"	"33.000"	"26.000"	"0.100077364747881"	"19"	"0.0006732"	"0.008582"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTDFDEVR"	"[K].fTDFDEVR.[QH]"	"N-Term(TMT6plex)"	"1"	"2"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"629.31903"	"1257.63078"	"1257.63128"	"-0.40"	"-0.00025"	"7/64"	"7"	"64"	"2728306.13153076"	"HCD"	"MS2"	"31.08223"	"117.9"	"100.000"	"74.4278"	"25245"	"25245"	"25228"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"160.2"	""	"140.6"	""	"133.3"	""	"210.8"	"0.5"	"244.2"	"229.3"	""	"424"	"19"	"33.000"	"26.000"	"0.269361710304211"	"17"	"0.0008629"	"0.01052"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTDFDEVR"	"[K].fTDFDEVR.[QH]"	"N-Term(TMT6plex)"	"1"	"2"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"629.31915"	"1257.63103"	"1257.63128"	"-0.20"	"-0.00013"	"12/64"	"12"	"64"	"2640020.41381836"	"HCD"	"MS2"	"43.31254"	"108.4"	"100.000"	"74.2905"	"25175"	"25175"	"25157"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"162.6"	""	"123.1"	""	"124.1"	""	"177.4"	"2.3"	"223.0"	"215.7"	""	"422"	"22"	"33.000"	"26.000"	"0.124819504811025"	"19"	"0.0003538"	"0.006622"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTDFDEVR"	"[K].fTDFDEVR.[QH]"	"N-Term(TMT6plex)"	"1"	"2"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"629.31946"	"1257.63164"	"1257.63128"	"0.28"	"0.00018"	"11/64"	"11"	"64"	"2589049.23626709"	"HCD"	"MS2"	"45.58014"	"106.5"	"100.000"	"74.1257"	"25122"	"25122"	"25105"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"162.9"	""	"125.5"	""	"132.5"	""	"175.0"	"0.7"	"214.9"	"198.9"	""	"426"	"19"	"33.000"	"26.000"	"0.272508217785553"	"18"	"0.000936"	"0.01273"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEVEEYFR"	"[K].gEVEEYFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"629.31958"	"1257.63188"	"1257.63128"	"0.48"	"0.00030"	"5/62"	"5"	"62"	"717590.463500977"	"HCD"	"MS2"	"58.52903"	"42.2"	"100.000"	"64.4575"	"21189"	"21189"	"21167"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.0"	""	"49.7"	""	"76.1"	""	"57.1"	""	"65.0"	"102.2"	""	"426"	"4"	"33.000"	"26.000"	"8.04228766671137"	"14"	"0.004606"	"0.0501"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDNLPNQAR"	"[K].tDNLPNQAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z118"	"Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"Q9Z118"	"Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"629.34003"	"1257.67278"	"1257.67488"	"-1.67"	"-0.00105"	"6/78"	"6"	"78"	"1662256.60516357"	"HCD"	"MS2"	"16.61859"	"92.7"	"100.000"	"29.3741"	"6963"	"6963"	"6948"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"132.5"	""	"75.2"	""	"84.4"	""	"180.8"	""	"213.4"	"196.2"	""	"561"	"31"	"34.000"	"27.000"	"0.0215741088500394"	"18"	"0"	"0.001471"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDNLPNQAR"	"[K].tDNLPNQAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z118"	"Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"Q9Z118"	"Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"629.34033"	"1257.67339"	"1257.67488"	"-1.19"	"-0.00075"	"8/78"	"8"	"78"	"1593676.31256104"	"HCD"	"MS2"	"10.4227"	"86.7"	"100.000"	"29.4157"	"6968"	"6968"	"6950"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"107.2"	""	"73.7"	""	"80.9"	""	"178.5"	""	"195.3"	"196.1"	""	"561"	"33"	"34.000"	"27.000"	"0.0136437221196455"	"27"	"0"	"0.0007827"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APIQWEER"	"[K].aPIQWEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"629.34210"	"1257.67693"	"1257.67890"	"-1.57"	"-0.00099"	"6/66"	"6"	"66"	"3803830.30407715"	"HCD"	"MS2"	"14.70298"	"200.4"	"100.000"	"59.2283"	"19084"	"19084"	"19064"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"314.8"	"2.1"	"262.4"	""	"280.6"	""	"262.2"	""	"382.0"	"398.5"	""	"590"	"21"	"34.000"	"27.000"	"0.231111744616032"	"18"	"0.002379"	"0.02463"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APIQWEER"	"[K].aPIQWEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"629.34229"	"1257.67729"	"1257.67890"	"-1.28"	"-0.00080"	"6/66"	"6"	"66"	"3725051.29486084"	"HCD"	"MS2"	"7.087472"	"211.9"	"100.000"	"59.0028"	"19007"	"19007"	"18989"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"335.7"	""	"270.4"	""	"302.7"	""	"289.0"	""	"392.7"	"423.5"	""	"603"	"23"	"34.000"	"27.000"	"0.138767356934779"	"17"	"0.001374"	"0.01791"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APIQWEER"	"[K].aPIQWEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"629.34253"	"1257.67778"	"1257.67890"	"-0.89"	"-0.00056"	"7/66"	"7"	"66"	"4168572.62921143"	"HCD"	"MS2"	"1.688841"	"169.1"	"100.000"	"59.5319"	"19208"	"19208"	"19190"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"290.2"	""	"226.0"	""	"232.7"	""	"234.0"	"0.5"	"299.3"	"317.6"	""	"594"	"38"	"34.000"	"27.000"	"0.00524513232743791"	"27"	"0.0008629"	"0.01062"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APIQWEER"	"[K].aPIQWEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"2"	"2"	"0.6757"	"0.0000"	"1"	"1"	"1"	"629.34253"	"1257.67778"	"1257.67890"	"-0.89"	"-0.00056"	"7/66"	"7"	"66"	"4500397.61956787"	"HCD"	"MS2"	"2.008273"	"181.6"	"100.000"	"59.2998"	"19128"	"19128"	"19110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"309.6"	""	"236.8"	""	"266.0"	""	"268.1"	"1.3"	"304.6"	"331.2"	""	"594"	"37"	"34.000"	"27.000"	"0.00529366493932083"	"27"	"0.0003538"	"0.007105"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTGPAGPK"	"[K].gDTGPAGPk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02454"	"Collagen alpha-1(I) chain OS=Rattus norvegicus OX=10116 GN=Col1a1 PE=1 SV=5"	"P02454"	"Collagen alpha-1(I) chain OS=Rattus norvegicus OX=10116 GN=Col1a1 PE=1 SV=5"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"629.36292"	"1257.71855"	"1257.72032"	"-1.41"	"-0.00088"	"7/66"	"7"	"66"	"511887.811401367"	"HCD"	"MS2"	"28.68636"	"43.3"	"100.000"	"28.8018"	"6731"	"6731"	"6710"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.4"	""	"46.3"	""	"53.6"	""	"78.5"	""	"97.6"	"84.0"	""	"549"	"39"	"34.000"	"27.000"	"0.00383303115109855"	"18"	"0"	"0.0002824"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHAEDLK"	"[R].sHAEDLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"629.36359"	"1257.71990"	"1257.72032"	"-0.34"	"-0.00021"	"12/56"	"12"	"56"	"656582.053527832"	"HCD"	"MS2"	"51.99712"	"51.5"	"100.000"	"25.1853"	"5264"	"5264"	"5238"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.3"	""	"49.2"	""	"63.1"	""	"92.8"	""	"122.1"	"113.0"	""	"532"	"21"	"34.000"	"27.000"	"0.1958310879336"	"23"	"0.001374"	"0.01642"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTGPAGPK"	"[K].gDTGPAGPk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02454"	"Collagen alpha-1(I) chain OS=Rattus norvegicus OX=10116 GN=Col1a1 PE=1 SV=5"	"P02454"	"Collagen alpha-1(I) chain OS=Rattus norvegicus OX=10116 GN=Col1a1 PE=1 SV=5"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"629.36426"	"1257.72124"	"1257.72032"	"0.73"	"0.00046"	"13/66"	"13"	"66"	"613227.301696777"	"HCD"	"MS2"	"0"	"49.6"	"100.000"	"28.9082"	"6761"	"6761"	"6737"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.3"	""	"56.1"	""	"54.1"	""	"90.3"	""	"99.7"	"113.2"	""	"526"	"28"	"34.000"	"27.000"	"0.0451809905822446"	""	"0"	"0.001556"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEEIQLR"	"[K].lQEEIQLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"629.37152"	"1257.73577"	"1257.73642"	"-0.52"	"-0.00033"	"6/70"	"6"	"70"	"1036220.24017334"	"HCD"	"MS2"	"15.84992"	"54.7"	"100.000"	"67.1117"	"22251"	"22251"	"22226"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"70.0"	""	"102.4"	""	"98.8"	""	"59.7"	""	"87.4"	"99.2"	""	"549"	"43"	"34.000"	"27.000"	"0.00146063717168735"	""	"0"	"0.003036"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEEIQLR"	"[K].lQEEIQLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"629.37158"	"1257.73589"	"1257.73642"	"-0.42"	"-0.00026"	"6/70"	"6"	"70"	"1489638.85552979"	"HCD"	"MS2"	"13.5141"	"78.3"	"100.000"	"67.0204"	"22229"	"22229"	"22204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"107.1"	""	"147.0"	""	"136.9"	""	"70.7"	"1.2"	"131.1"	"147.3"	""	"549"	"32"	"34.000"	"27.000"	"0.0177640648022986"	""	"0.0004639"	"0.007922"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILQEIQR"	"[R].eILQEIQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P84060"	"Dystrobrevin beta OS=Rattus norvegicus OX=10116 GN=Dtnb PE=1 SV=2"	"P84060"	"Dystrobrevin beta OS=Rattus norvegicus OX=10116 GN=Dtnb PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"629.37164"	"1257.73601"	"1257.73642"	"-0.32"	"-0.00020"	"5/72"	"5"	"72"	"566204.929992676"	"HCD"	"MS2"	"47.25541"	"35.9"	"100.000"	"67.6931"	"22488"	"22488"	"22462"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.0"	""	"42.7"	""	"44.2"	""	"65.7"	""	"71.1"	"71.2"	""	"549"	"21"	"34.000"	"27.000"	"0.226225912571069"	"23"	"0.001812"	"0.02059"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILQEIQR"	"[R].eILQEIQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P84060"	"Dystrobrevin beta OS=Rattus norvegicus OX=10116 GN=Dtnb PE=1 SV=2"	"P84060"	"Dystrobrevin beta OS=Rattus norvegicus OX=10116 GN=Dtnb PE=1 SV=2"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"629.37164"	"1257.73601"	"1257.73642"	"-0.32"	"-0.00020"	"6/72"	"6"	"72"	"591578.921508789"	"HCD"	"MS2"	"43.25101"	"41.4"	"100.000"	"67.5647"	"22451"	"22451"	"22424"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.5"	""	"54.3"	""	"47.0"	""	"70.8"	""	"77.5"	"90.6"	""	"549"	"24"	"34.000"	"27.000"	"0.106302223530984"	"25"	"0.000936"	"0.01209"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLENEAVR"	"[R].vVLENEAVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"D4ABY2"	"Coatomer subunit gamma-2 OS=Rattus norvegicus OX=10116 GN=Copg2 PE=3 SV=2"	"D4ABY2"	"Coatomer subunit gamma-2 OS=Rattus norvegicus OX=10116 GN=Copg2 PE=3 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"629.37164"	"1257.73601"	"1257.73642"	"-0.32"	"-0.00020"	"7/76"	"7"	"76"	"1899381.77770996"	"HCD"	"MS2"	"16.55129"	"86.1"	"100.000"	"52.1313"	"16206"	"16206"	"16188"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"130.2"	""	"107.8"	""	"116.7"	""	"133.9"	"1.6"	"153.6"	"172.4"	""	"549"	"34"	"34.000"	"27.000"	"0.0109784833809421"	"19"	"0"	"0.001212"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYGGGNEGGR"	"[R].yYGGGNEGGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.80389"	"1258.60051"	"1258.60138"	"-0.69"	"-0.00043"	"7/80"	"7"	"80"	"2214503.45635986"	"HCD"	"MS2"	"0"	"130.6"	"100.000"	"26.0438"	"5613"	"5613"	"5595"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"197.0"	""	"114.1"	""	"113.7"	""	"254.6"	"6.3"	"300.2"	"255.0"	""	"290"	"27"	"31.000"	"24.000"	"0.0260236375890716"	"14"	"0"	"0.0001654"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYGGGNEGGR"	"[R].yYGGGNEGGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.80426"	"1258.60124"	"1258.60138"	"-0.11"	"-0.00007"	"8/80"	"8"	"80"	"817718.393920898"	"HCD"	"MS2"	"0"	"53.1"	"100.000"	"26.0259"	"5591"	"5591"	"5570"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"88.8"	""	"56.1"	""	"41.5"	""	"93.8"	"0.6"	"117.5"	"105.7"	""	"280"	"28"	"31.000"	"24.000"	"0.0234492002643701"	"14"	"0"	"0.0005098"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYGGGNEGGR"	"[R].yYGGGNEGGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"629.80475"	"1258.60222"	"1258.60138"	"0.67"	"0.00042"	"9/80"	"9"	"80"	"1223509.61053467"	"HCD"	"MS2"	"0"	"78.9"	"100.000"	"25.9727"	"5585"	"5585"	"5559"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"131.3"	""	"87.9"	""	"63.8"	""	"156.1"	"1.8"	"167.7"	"140.1"	""	"320"	"34"	"32.000"	"25.000"	"0.00584951666581"	"17"	"0"	"0.0002717"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEAAVFHR"	"[R].eAEAAVFHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.6842"	"0.0000"	"1"	"1"	"1"	"420.22916"	"1258.67292"	"1258.67415"	"-0.98"	"-0.00041"	"6/68"	"6"	"68"	"4628799.4576416"	"HCD"	"MS2"	"38.02003"	"72.7"	"100.000"	"35.1732"	"9310"	"9310"	"9290"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.6"	""	"94.2"	""	"98.3"	""	"101.3"	"0.2"	"112.6"	"176.7"	""	"618"	"38"	"34.000"	"27.000"	"0.00521144884845122"	"27"	"0.000936"	"0.01145"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEAAVFHR"	"[R].eAEAAVFHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"420.22922"	"1258.67310"	"1258.67415"	"-0.84"	"-0.00035"	"11/68"	"11"	"68"	"4022179.26043701"	"HCD"	"MS2"	"33.06079"	"62.7"	"100.000"	"35.2941"	"9354"	"9354"	"9332"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.6"	""	"62.4"	""	"83.3"	""	"93.5"	""	"100.3"	"166.4"	""	"618"	"40"	"34.000"	"27.000"	"0.00325056219011376"	"24"	"0.0003538"	"0.006925"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].TPEEILAEk.[S]"	"K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"629.85394"	"1258.70061"	"1258.70920"	"-6.82"	"-0.00429"	"6/78"	"6"	"78"	"1133495.00769043"	"HCD"	"MS2"	"27.0404"	"35.4"	"100.000"	"56.9116"	"18154"	"18154"	"18131"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.6"	""	"41.9"	""	"50.3"	""	"58.1"	"1.4"	"71.1"	"67.9"	""	"661"	"35"	"35.000"	"28.000"	"0.0115656877702872"	"24"	"0.003967"	"0.0421"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].TPEEILAEk.[S]"	"K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"629.85693"	"1258.70659"	"1258.70920"	"-2.07"	"-0.00130"	"6/78"	"6"	"78"	"805118.102050781"	"HCD"	"MS2"	"32.82382"	"31.2"	"100.000"	"57.0288"	"18188"	"18188"	"18163"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.3"	""	"42.9"	""	"41.5"	""	"44.2"	"0.1"	"63.7"	"62.4"	""	"727"	"38"	"35.000"	"28.000"	"0.00543881660990326"	"27"	"0.000936"	"0.01293"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLEEDAAR"	"[K].lLLEEDAAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62784"	"Type I inositol 3,4-bisphosphate 4-phosphatase OS=Rattus norvegicus OX=10116 GN=Inpp4a PE=1 SV=1"	"Q62784"	"Type I inositol 3,4-bisphosphate 4-phosphatase OS=Rattus norvegicus OX=10116 GN=Inpp4a PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"629.86292"	"1258.71855"	"1258.72043"	"-1.49"	"-0.00094"	"12/68"	"12"	"68"	"522231.281921387"	"HCD"	"MS2"	"15.88111"	"31.3"	"100.000"	"68.4056"	"22778"	"22778"	"22757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.2"	""	"37.2"	""	"47.4"	""	"50.0"	""	"60.5"	"58.4"	""	"773"	"40"	"35.000"	"28.000"	"0.00428696066098918"	"25"	"0"	"0.00108"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLEELER"	"[K].qLLEELER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJT0"	"Arginine and glutamate-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Arglu1 PE=1 SV=1"	"Q5BJT0"	"Arginine and glutamate-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Arglu1 PE=1 SV=1"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"629.86304"	"1258.71880"	"1258.72043"	"-1.30"	"-0.00082"	"6/76"	"6"	"76"	"322679.809387207"	"HCD"	"MS2"	"12.53938"	"20.1"	"100.000"	"83.6270"	"28929"	"28929"	"28911"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.3"	""	"21.0"	""	"18.6"	""	"38.3"	""	"42.5"	"43.7"	""	"766"	"38"	"35.000"	"28.000"	"0.00571740258868756"	""	"0.0008629"	"0.01019"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELELELGR"	"[K].aELELELGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"629.86316"	"1258.71904"	"1258.72043"	"-1.10"	"-0.00070"	"6/72"	"6"	"72"	"528553.390869141"	"HCD"	"MS2"	"21.21425"	"28.6"	"100.000"	"78.1223"	"26730"	"26730"	"26715"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.6"	""	"37.9"	""	"48.1"	""	"40.2"	""	"52.7"	"60.5"	""	"766"	"30"	"35.000"	"28.000"	"0.0343715228293787"	"25"	"0"	"0.001206"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLEELER"	"[K].qLLEELER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJT0"	"Arginine and glutamate-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Arglu1 PE=1 SV=1"	"Q5BJT0"	"Arginine and glutamate-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Arglu1 PE=1 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"629.86322"	"1258.71916"	"1258.72043"	"-1.01"	"-0.00063"	"6/76"	"6"	"76"	"296203.620422363"	"HCD"	"MS2"	"34.71758"	"17.6"	"100.000"	"83.6100"	"28920"	"28920"	"28896"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.2"	""	"17.9"	""	"20.9"	""	"31.3"	""	"39.2"	"35.2"	""	"766"	"39"	"35.000"	"28.000"	"0.00531127482457933"	""	"0.0008629"	"0.01029"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELELELGR"	"[K].aELELELGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"629.86365"	"1258.72002"	"1258.72043"	"-0.33"	"-0.00021"	"7/72"	"7"	"72"	"499487.614685059"	"HCD"	"MS2"	"15.06982"	"23.0"	"100.000"	"78.4111"	"26845"	"26845"	"26831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.5"	""	"37.5"	""	"30.6"	""	"38.1"	""	"41.6"	"45.6"	""	"764"	"16"	"35.000"	"28.000"	"0.859138859429269"	"17"	"0.005427"	"0.06262"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLEEDAAR"	"[K].lLLEEDAAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62784"	"Type I inositol 3,4-bisphosphate 4-phosphatase OS=Rattus norvegicus OX=10116 GN=Inpp4a PE=1 SV=1"	"Q62784"	"Type I inositol 3,4-bisphosphate 4-phosphatase OS=Rattus norvegicus OX=10116 GN=Inpp4a PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"629.86377"	"1258.72026"	"1258.72043"	"-0.14"	"-0.00009"	"12/68"	"12"	"68"	"613842.657592773"	"HCD"	"MS2"	"9.043104"	"33.7"	"100.000"	"68.2866"	"22744"	"22744"	"22719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.5"	""	"43.5"	""	"47.9"	""	"55.3"	""	"64.2"	"62.9"	""	"765"	"42"	"35.000"	"28.000"	"0.00260994550509189"	"25"	"0"	"0.000356"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELELELGR"	"[K].aELELELGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"629.86377"	"1258.72026"	"1258.72043"	"-0.14"	"-0.00009"	"6/72"	"6"	"72"	"661890.028381348"	"HCD"	"MS2"	"27.82653"	"30.1"	"100.000"	"78.1808"	"26746"	"26746"	"26729"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.1"	""	"35.5"	""	"45.5"	""	"47.3"	""	"60.7"	"58.1"	""	"765"	"30"	"35.000"	"28.000"	"0.0428184990426185"	"22"	"0"	"0.00162"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELAPDAK"	"[R].gELAPDAk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"629.87317"	"1258.73906"	"1258.74072"	"-1.32"	"-0.00083"	"6/64"	"6"	"64"	"2106554.34204102"	"HCD"	"MS2"	"22.8877"	"137.0"	"100.000"	"42.6888"	"12365"	"12365"	"12346"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"129.0"	""	"140.5"	""	"140.2"	""	"268.4"	"1.7"	"292.7"	"331.7"	""	"732"	"33"	"35.000"	"28.000"	"0.020113195983189"	"26"	"0.0002479"	"0.005354"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELAPDAK"	"[R].gELAPDAk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"629.87329"	"1258.73931"	"1258.74072"	"-1.13"	"-0.00071"	"6/64"	"6"	"64"	"7871487.71948242"	"HCD"	"MS2"	"4.58323"	"525.8"	"100.000"	"42.3737"	"12237"	"12237"	"12220"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"500.3"	""	"507.3"	""	"496.8"	""	"1092.4"	""	"1189.4"	"1223.4"	""	"732"	"33"	"35.000"	"28.000"	"0.0169621572623481"	"26"	"0.0004639"	"0.007826"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELAPDAK"	"[R].gELAPDAk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"629.87347"	"1258.73967"	"1258.74072"	"-0.84"	"-0.00053"	"6/64"	"6"	"64"	"1920084.03594971"	"HCD"	"MS2"	"16.11244"	"131.4"	"100.000"	"42.8064"	"12403"	"12403"	"12386"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.2"	""	"120.1"	""	"137.2"	""	"241.9"	""	"311.2"	"317.5"	""	"732"	"34"	"35.000"	"28.000"	"0.0145037760537491"	"27"	"0.0001301"	"0.004263"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELAPDAK"	"[R].gELAPDAk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"629.87354"	"1258.73979"	"1258.74072"	"-0.74"	"-0.00046"	"6/64"	"6"	"64"	"8294226.75128174"	"HCD"	"MS2"	"4.036873"	"549.1"	"100.000"	"42.5005"	"12278"	"12278"	"12261"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"503.8"	""	"507.6"	""	"556.7"	""	"1147.6"	""	"1260.5"	"1265.9"	""	"732"	"33"	"35.000"	"28.000"	"0.0168842232289099"	"26"	"0.0003538"	"0.007377"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADEVAPAK"	"[R].aDEVAPAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"629.87372"	"1258.74016"	"1258.74072"	"-0.45"	"-0.00028"	"7/58"	"7"	"58"	"8440969.23187256"	"HCD"	"MS2"	"5.791385"	"507.1"	"100.000"	"38.3233"	"10586"	"10586"	"10568"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"733.2"	""	"541.5"	""	"596.8"	""	"867.4"	""	"932.4"	"1148.0"	""	"732"	"48"	"35.000"	"28.000"	"0.000589496302475247"	""	"0.0001301"	"0.003974"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELAPDAK"	"[R].gELAPDAk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"420.25174"	"1258.74067"	"1258.74072"	"-0.05"	"-0.00002"	"9/64"	"9"	"64"	"2128932.24353027"	"HCD"	"MS2"	"14.1585"	"104.8"	"100.000"	"42.5348"	"12292"	"12292"	"12261"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"111.2"	""	"96.9"	""	"123.0"	""	"195.7"	"0.9"	"232.7"	"236.5"	""	"716"	"26"	"35.000"	"28.000"	"0.0945982335121257"	"19"	"0.008393"	"0.1"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADEVAPAK"	"[R].aDEVAPAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"629.87415"	"1258.74101"	"1258.74072"	"0.23"	"0.00015"	"7/58"	"7"	"58"	"7671839.72290039"	"HCD"	"MS2"	"4.733198"	"467.3"	"100.000"	"38.5290"	"10662"	"10662"	"10647"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"680.2"	""	"485.8"	""	"558.5"	""	"820.5"	"1.5"	"874.9"	"1012.0"	""	"709"	"50"	"35.000"	"28.000"	"0.000366957898087827"	""	"0"	"0.001931"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDELTLAR"	"[R].vLDELTLAR.[AT]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFV3; Q6IFU8; Q6IFW5; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 12 OS=Rattus norvegicus OX=10116 GN=Krt12 PE=3 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"629.88147"	"1258.75566"	"1258.75682"	"-0.92"	"-0.00058"	"8/70"	"8"	"70"	"411734.0078125"	"HCD"	"MS2"	"11.41279"	"20.4"	"100.000"	"92.4280"	"32349"	"32349"	"32337"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.3"	""	"28.8"	""	"27.8"	""	"29.6"	""	"36.9"	"46.3"	""	"776"	"44"	"35.000"	"28.000"	"0.00168978606990001"	"25"	"0"	"0.0009959"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDELTLAR"	"[R].vLDELTLAR.[AT]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFV3; Q6IFU8; Q6IFW5; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 12 OS=Rattus norvegicus OX=10116 GN=Krt12 PE=3 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"629.88184"	"1258.75640"	"1258.75682"	"-0.34"	"-0.00021"	"6/70"	"6"	"70"	"412403.894836426"	"HCD"	"MS2"	"12.83025"	"22.8"	"100.000"	"92.3972"	"32347"	"32347"	"32336"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.9"	""	"27.5"	""	"32.5"	""	"38.4"	"0.4"	"34.7"	"53.9"	""	"775"	"43"	"35.000"	"28.000"	"0.00182083967084521"	""	"0"	"0.0004438"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQVSEGGQLR"	"[R].gQVSEGGQLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4V4"	"Sorting nexin-27 OS=Rattus norvegicus OX=10116 GN=Snx27 PE=1 SV=2"	"Q8K4V4"	"Sorting nexin-27 OS=Rattus norvegicus OX=10116 GN=Snx27 PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"630.34735"	"1259.68743"	"1259.69053"	"-2.46"	"-0.00155"	"8/90"	"8"	"90"	"1185594.19110107"	"HCD"	"MS2"	"33.27238"	"103.4"	"100.000"	"27.3749"	"6137"	"6137"	"6118"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"135.0"	""	"137.6"	""	"145.2"	""	"173.6"	""	"202.4"	"193.1"	""	"677"	"29"	"35.000"	"28.000"	"0.0383317522955236"	"20"	"0"	"0.001359"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APGDQGEK"	"[R].aPGDQGEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"630.35309"	"1259.69890"	"1259.69959"	"-0.54"	"-0.00034"	"7/68"	"7"	"68"	"4438457.29760742"	"HCD"	"MS2"	"28.47908"	"289.7"	"100.000"	"26.2001"	"5660"	"5660"	"5647"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"315.7"	""	"222.5"	""	"253.8"	""	"619.3"	""	"740.3"	"615.2"	""	"779"	"35"	"35.000"	"28.000"	"0.0118989177359744"	"19"	"0.001886"	"0.02156"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APGDQGEK"	"[R].aPGDQGEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"630.35315"	"1259.69902"	"1259.69959"	"-0.45"	"-0.00028"	"7/68"	"7"	"68"	"4349926.30328369"	"HCD"	"MS2"	"33.24241"	"269.2"	"100.000"	"26.1286"	"5647"	"5647"	"5631"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"252.1"	""	"218.8"	""	"243.5"	""	"595.7"	""	"681.3"	"580.3"	""	"779"	"36"	"35.000"	"28.000"	"0.0087802617313337"	"24"	"0.002056"	"0.02248"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASALEELQK"	"[M].aSALEELQk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"0"	"2"	"2"	"0.6531"	"0.0000"	"1"	"1"	"1"	"630.35516"	"1259.70305"	"1259.70445"	"-1.11"	"-0.00070"	"6/74"	"6"	"74"	"800915.66583252"	"HCD"	"MS2"	"16.56964"	"30.4"	"100.000"	"93.9389"	"32913"	"32913"	"32905"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.6"	""	"24.5"	""	"35.2"	""	"51.5"	"0.7"	"48.1"	"96.6"	""	"891"	"49"	"36.000"	"29.000"	"0.00055188387929928"	""	"0.001465"	"0.01823"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASALEELQK"	"[M].aSALEELQk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"0"	"2"	"2"	"0.6531"	"0.0000"	"1"	"1"	"1"	"630.35522"	"1259.70317"	"1259.70445"	"-1.01"	"-0.00064"	"6/74"	"6"	"74"	"820265.829345703"	"HCD"	"MS2"	"22.79497"	"32.7"	"100.000"	"93.9200"	"32924"	"32924"	"32918"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.0"	""	"25.7"	""	"37.1"	""	"50.3"	""	"52.9"	"106.0"	""	"893"	"49"	"36.000"	"29.000"	"0.000567311337975613"	""	"0.0003538"	"0.006578"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASALEELQK"	"[M].aSALEELQk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"630.35535"	"1259.70342"	"1259.70445"	"-0.82"	"-0.00052"	"6/74"	"6"	"74"	"1552656.59777832"	"HCD"	"MS2"	"5.063129"	"57.4"	"100.000"	"94.1936"	"33005"	"33005"	"33001"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.4"	""	"47.6"	""	"57.7"	""	"103.0"	""	"113.8"	"166.9"	""	"893"	"50"	"36.000"	"29.000"	"0.00045900927711347"	""	"0"	"0.002658"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASALEELQK"	"[M].aSALEELQk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"0"	"2"	"2"	"0.6591"	"0.0000"	"1"	"1"	"1"	"630.35577"	"1259.70427"	"1259.70445"	"-0.14"	"-0.00009"	"6/74"	"6"	"74"	"1737507.09533691"	"HCD"	"MS2"	"3.474808"	"60.8"	"100.000"	"94.1781"	"33018"	"33018"	"33013"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.9"	""	"52.6"	""	"58.9"	""	"116.6"	""	"111.5"	"178.9"	""	"891"	"44"	"36.000"	"29.000"	"0.0019224174872677"	""	"0.000936"	"0.01126"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGASILLDGR"	"[K].eGASILLDGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9206"	"0.0000"	"1"	"1"	"1"	"630.36090"	"1259.71453"	"1259.71568"	"-0.92"	"-0.00058"	"7/86"	"7"	"86"	"7296557.86199951"	"HCD"	"MS2"	"0.8246412"	"264.2"	"91.637"	"65.7297"	"21703"	"21703"	"21686"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"419.4"	""	"407.1"	""	"409.1"	""	"375.5"	""	"417.8"	"470.5"	""	"854"	"63"	"36.000"	"29.000"	"2.34653953137206E-05"	"22"	"0"	"1.994E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLTAVPASR"	"[K].tDLTAVPASR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"630.36096"	"1259.71465"	"1259.71568"	"-0.82"	"-0.00052"	"7/88"	"7"	"88"	"6047285.28192139"	"HCD"	"MS2"	"22.40868"	"212.1"	"100.000"	"45.5857"	"13539"	"13539"	"13518"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"340.6"	""	"287.4"	""	"297.4"	""	"329.5"	""	"343.6"	"413.8"	""	"854"	"43"	"36.000"	"29.000"	"0.00203904999851834"	"23"	"0"	"0.0001306"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSLDEALQR"	"[R].vSLDEALQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5952"	"0.0000"	"1"	"1"	"1"	"630.36102"	"1259.71477"	"1259.71568"	"-0.72"	"-0.00046"	"7/72"	"7"	"72"	"1756282.38763428"	"HCD"	"MS2"	"20.73523"	"86.7"	"100.000"	"67.2003"	"22302"	"22302"	"22284"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"128.8"	""	"134.2"	""	"133.9"	""	"101.0"	"2.2"	"149.8"	"171.3"	""	"853"	"42"	"36.000"	"29.000"	"0.00295065909096926"	""	"0"	"0.0008456"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLTAVPASR"	"[K].tDLTAVPASR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"630.36102"	"1259.71477"	"1259.71568"	"-0.72"	"-0.00046"	"7/88"	"7"	"88"	"3070584.91912842"	"HCD"	"MS2"	"0"	"126.3"	"100.000"	"45.8780"	"13659"	"13659"	"13642"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"163.5"	""	"162.5"	""	"186.6"	""	"182.6"	"0.2"	"234.7"	"267.3"	""	"853"	"39"	"36.000"	"29.000"	"0.00568746890817658"	"23"	"0"	"0.0006622"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGASILLDGR"	"[K].eGASILLDGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8730"	"0.0000"	"1"	"1"	"1"	"630.36115"	"1259.71501"	"1259.71568"	"-0.53"	"-0.00033"	"7/86"	"7"	"86"	"6774839.17211914"	"HCD"	"MS2"	"1.049777"	"276.9"	"100.000"	"65.8142"	"21722"	"21722"	"21708"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"459.8"	""	"433.6"	""	"434.1"	""	"391.5"	""	"411.5"	"490.4"	""	"855"	"63"	"36.000"	"29.000"	"2.34928723574134E-05"	"25"	"0"	"2.274E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSLDEALQR"	"[R].vSLDEALQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5814"	"0.0000"	"1"	"1"	"1"	"630.36121"	"1259.71514"	"1259.71568"	"-0.43"	"-0.00027"	"7/72"	"7"	"72"	"1572815.62542725"	"HCD"	"MS2"	"13.66313"	"77.2"	"100.000"	"67.3266"	"22339"	"22339"	"22322"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"114.0"	""	"122.0"	""	"119.4"	""	"91.9"	""	"137.9"	"146.7"	""	"855"	"43"	"36.000"	"29.000"	"0.00200417720867101"	""	"0"	"0.0007893"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGASILLDGR"	"[K].eGASILLDGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"630.36121"	"1259.71514"	"1259.71568"	"-0.43"	"-0.00027"	"7/86"	"7"	"86"	"3594564.1552124"	"HCD"	"MS2"	"37.39598"	"155.5"	"100.000"	"65.5214"	"21602"	"21602"	"21581"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"230.0"	""	"227.8"	""	"241.9"	""	"215.3"	""	"260.0"	"300.1"	""	"855"	"62"	"36.000"	"29.000"	"2.74117093990157E-05"	"27"	"0"	"4.881E-05"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLTAVPASR"	"[K].tDLTAVPASR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"630.36127"	"1259.71526"	"1259.71568"	"-0.34"	"-0.00021"	"7/88"	"7"	"88"	"2201770.63262939"	"HCD"	"MS2"	"0"	"97.0"	"100.000"	"46.0758"	"13727"	"13727"	"13709"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"140.1"	""	"114.5"	""	"148.9"	""	"156.2"	"1.7"	"171.7"	"185.7"	""	"855"	"40"	"36.000"	"29.000"	"0.00439476967449067"	"24"	"0.0001301"	"0.003991"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGASILLDGR"	"[K].eGASILLDGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"630.36133"	"1259.71538"	"1259.71568"	"-0.24"	"-0.00015"	"7/86"	"7"	"86"	"3745326.46929932"	"HCD"	"MS2"	"34.43608"	"159.5"	"100.000"	"65.4344"	"21582"	"21582"	"21563"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"231.2"	""	"214.9"	""	"267.1"	""	"224.3"	"1.0"	"272.7"	"298.4"	""	"855"	"58"	"36.000"	"29.000"	"6.57561108729547E-05"	"27"	"0"	"5.531E-05"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLTAVPASR"	"[K].tDLTAVPASR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"630.36139"	"1259.71550"	"1259.71568"	"-0.14"	"-0.00009"	"7/88"	"7"	"88"	"6570032.8001709"	"HCD"	"MS2"	"20.25123"	"246.2"	"100.000"	"45.7652"	"13600"	"13600"	"13581"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"370.6"	""	"337.1"	""	"363.1"	""	"372.6"	""	"428.5"	"463.1"	""	"855"	"43"	"36.000"	"29.000"	"0.00205086049292185"	"23"	"0"	"0.0001317"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLSEEGLLR"	"[R].nLSEEGLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63505"	"General transcription factor 3C polypeptide 1 OS=Rattus norvegicus OX=10116 GN=Gtf3c1 PE=1 SV=1"	"Q63505"	"General transcription factor 3C polypeptide 1 OS=Rattus norvegicus OX=10116 GN=Gtf3c1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"630.36176"	"1259.71623"	"1259.71568"	"0.44"	"0.00028"	"7/84"	"7"	"84"	"684191.342285156"	"HCD"	"MS2"	"30.92412"	"41.5"	"100.000"	"62.9106"	"20545"	"20545"	"20522"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.6"	""	"52.0"	""	"57.0"	""	"74.0"	""	"83.1"	"78.4"	""	"869"	"24"	"36.000"	"29.000"	"0.155235048177013"	"22"	"0.0003538"	"0.007015"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLSEEGLLR"	"[R].nLSEEGLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63505"	"General transcription factor 3C polypeptide 1 OS=Rattus norvegicus OX=10116 GN=Gtf3c1 PE=1 SV=1"	"Q63505"	"General transcription factor 3C polypeptide 1 OS=Rattus norvegicus OX=10116 GN=Gtf3c1 PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"630.36200"	"1259.71672"	"1259.71568"	"0.83"	"0.00052"	"7/84"	"7"	"84"	"690021.936706543"	"HCD"	"MS2"	"10.79135"	"39.6"	"100.000"	"62.8031"	"20517"	"20517"	"20496"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.8"	""	"47.8"	""	"50.0"	""	"71.0"	""	"80.2"	"73.6"	""	"866"	"22"	"36.000"	"29.000"	"0.268217985508247"	"21"	"0.001978"	"0.02207"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDPELAK"	"[K].eDPELAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1LP64"	"E3 ubiquitin-protein ligase TRIP12 OS=Rattus norvegicus OX=10116 GN=Trip12 PE=1 SV=1"	"F1LP64"	"E3 ubiquitin-protein ligase TRIP12 OS=Rattus norvegicus OX=10116 GN=Trip12 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"630.36560"	"1259.72392"	"1259.72474"	"-0.65"	"-0.00041"	"12/54"	"12"	"54"	"1007527.22393799"	"HCD"	"MS2"	"39.69026"	"76.8"	"100.000"	"44.7710"	"13207"	"13207"	"13185"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"101.0"	""	"65.8"	""	"93.0"	""	"119.8"	""	"159.6"	"192.1"	""	"843"	"24"	"36.000"	"29.000"	"0.163605379265058"	"29"	"0.00413"	"0.04507"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDPELAK"	"[K].eDPELAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1LP64"	"E3 ubiquitin-protein ligase TRIP12 OS=Rattus norvegicus OX=10116 GN=Trip12 PE=1 SV=1"	"F1LP64"	"E3 ubiquitin-protein ligase TRIP12 OS=Rattus norvegicus OX=10116 GN=Trip12 PE=1 SV=1"	"0"	"2"	"2"	"0.2800"	"0.0000"	"1"	"1"	"1"	"630.36627"	"1259.72527"	"1259.72474"	"0.42"	"0.00026"	"6/54"	"6"	"54"	"918017.480895996"	"HCD"	"MS2"	"38.12087"	"68.6"	"100.000"	"44.9576"	"13272"	"13272"	"13247"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.4"	""	"67.7"	""	"75.7"	""	"114.2"	""	"140.3"	"180.0"	""	"837"	"25"	"36.000"	"29.000"	"0.142789233513777"	""	"0.002871"	"0.02697"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPLDIK"	"[R].sEPLDIk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"3"	"630.38379"	"1259.76030"	"1259.76112"	"-0.65"	"-0.00041"	"6/56"	"6"	"56"	"4745600.71466064"	"HCD"	"MS2"	"12.0326"	"318.5"	"100.000"	"59.6103"	"19240"	"19240"	"19222"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"490.4"	""	"403.6"	""	"410.2"	""	"510.6"	""	"609.7"	"595.2"	""	"729"	"36"	"35.000"	"28.000"	"0.00850545463701426"	""	"0.003922"	"0.03936"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPLDIK"	"[R].sEPLDIk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"630.38403"	"1259.76079"	"1259.76112"	"-0.27"	"-0.00017"	"6/56"	"6"	"56"	"5113540.48126221"	"HCD"	"MS2"	"16.02857"	"344.2"	"100.000"	"59.3737"	"19159"	"19159"	"19142"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"550.2"	""	"446.3"	""	"460.6"	""	"529.3"	""	"659.7"	"616.7"	""	"729"	"34"	"35.000"	"28.000"	"0.013573677692979"	""	"0.00387"	"0.03925"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWYPAHSR"	"[R].dWYPAHSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"420.88168"	"1260.63050"	"1260.63229"	"-1.42"	"-0.00060"	"11/68"	"11"	"68"	"8247934.4107666"	"HCD"	"MS2"	"26.09168"	"126.4"	"100.000"	"35.4806"	"9430"	"9430"	"9410"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"154.6"	""	"157.8"	""	"169.5"	""	"213.8"	""	"265.9"	"237.8"	""	"444"	"26"	"33.000"	"26.000"	"0.0551255549375617"	"18"	"0.002467"	"0.025"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWYPAHSR"	"[R].dWYPAHSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"420.88181"	"1260.63086"	"1260.63229"	"-1.13"	"-0.00047"	"11/68"	"11"	"68"	"10165441.9451294"	"HCD"	"MS2"	"15.96129"	"147.3"	"100.000"	"35.3938"	"9400"	"9400"	"9380"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"178.2"	""	"195.0"	""	"191.3"	""	"247.4"	"2.3"	"304.8"	"278.8"	""	"444"	"30"	"33.000"	"26.000"	"0.0226127288148014"	"22"	"0.001374"	"0.01708"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWYPAHSR"	"[R].dWYPAHSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"420.88211"	"1260.63178"	"1260.63229"	"-0.40"	"-0.00017"	"6/68"	"6"	"68"	"4232507.11181641"	"HCD"	"MS2"	"18.87148"	"78.1"	"100.000"	"35.7359"	"9538"	"9538"	"9520"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"96.8"	""	"95.6"	""	"105.2"	""	"125.0"	"1.3"	"159.9"	"157.6"	""	"455"	"20"	"33.000"	"26.000"	"0.226976764519631"	"19"	"0.006739"	"0.07598"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWYPAHSR"	"[R].dWYPAHSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"420.88239"	"1260.63260"	"1260.63229"	"0.25"	"0.00011"	"11/68"	"11"	"68"	"8825218.63293457"	"HCD"	"MS2"	"5.355273"	"108.7"	"80.191"	"35.7810"	"9552"	"9552"	"9537"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"127.3"	""	"137.0"	""	"149.3"	""	"177.8"	"0.3"	"225.5"	"214.3"	""	"435"	"30"	"33.000"	"26.000"	"0.0197450965313755"	"22"	"0.002973"	"0.02918"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYGSSPLHR"	"[K].dYGSSPLHR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8293"	"0.0000"	"1"	"1"	"1"	"420.88760"	"1260.64826"	"1260.65342"	"-4.09"	"-0.00172"	"10/72"	"10"	"72"	"10818414.0340576"	"HCD"	"MS2"	"6.9611"	"194.7"	"100.000"	"29.6518"	"7075"	"7075"	"7058"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"291.3"	""	"213.2"	""	"214.3"	""	"332.7"	"8.9"	"399.9"	"387.9"	""	"549"	"41"	"34.000"	"27.000"	"0.00211126305858674"	"22"	"0.0002479"	"0.005054"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYGSSPLHR"	"[K].dYGSSPLHR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8293"	"0.0000"	"1"	"1"	"1"	"420.88782"	"1260.64890"	"1260.65342"	"-3.58"	"-0.00151"	"10/72"	"10"	"72"	"12115494.0300293"	"HCD"	"MS2"	"5.747083"	"206.0"	"100.000"	"29.6958"	"7081"	"7081"	"7063"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"296.1"	""	"227.1"	""	"235.7"	""	"340.5"	"7.3"	"418.6"	"430.2"	""	"546"	"41"	"34.000"	"27.000"	"0.0022395597160204"	"22"	"0.0003538"	"0.006345"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYGSSPLHR"	"[K].dYGSSPLHR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"630.82971"	"1260.65215"	"1260.65342"	"-1.01"	"-0.00063"	"7/72"	"7"	"72"	"846004.255126953"	"HCD"	"MS2"	"100"	"52.9"	"100.000"	"29.6866"	"7078"	"7078"	"7052"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.2"	""	"61.2"	""	"68.7"	""	"91.0"	""	"98.8"	"101.8"	""	"580"	"12"	"34.000"	"27.000"	"1.81718020754977"	"13"	"0.001546"	"0.01911"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQFESHLR"	"[K].dQFESHLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"3"	"3"	"0.9024"	"0.0000"	"1"	"1"	"1"	"420.88904"	"1260.65256"	"1260.65342"	"-0.68"	"-0.00028"	"5/76"	"5"	"76"	"3765442.35015869"	"HCD"	"MS2"	"5.764236"	"67.3"	"100.000"	"33.5951"	"8673"	"8673"	"8656"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"98.0"	""	"71.6"	""	"97.4"	""	"118.6"	"0.7"	"128.2"	"122.9"	""	"580"	"41"	"34.000"	"27.000"	"0.0023900005335377"	"19"	"0.001812"	"0.02055"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQFESHLR"	"[K].dQFESHLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"420.88907"	"1260.65265"	"1260.65342"	"-0.61"	"-0.00025"	"5/76"	"5"	"76"	"3108449.30151367"	"HCD"	"MS2"	"9.649978"	"61.2"	"100.000"	"33.5535"	"8650"	"8650"	"8629"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"85.7"	""	"71.8"	""	"79.8"	""	"103.6"	""	"120.3"	"124.1"	""	"580"	"34"	"34.000"	"27.000"	"0.0120336672363965"	"16"	"0.0023"	"0.02305"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPELTWER"	"[R].tPELTWER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"630.84247"	"1260.67766"	"1260.67857"	"-0.72"	"-0.00045"	"5/68"	"5"	"68"	"2824304.57647705"	"HCD"	"MS2"	"6.445519"	"122.5"	"100.000"	"65.3191"	"21535"	"21535"	"21517"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"168.6"	""	"163.1"	""	"197.0"	""	"181.9"	""	"223.4"	"234.8"	""	"823"	"33"	"36.000"	"29.000"	"0.0204347740276813"	"25"	"0.001635"	"0.01971"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPELTWER"	"[R].tPELTWER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"630.84253"	"1260.67778"	"1260.67857"	"-0.62"	"-0.00039"	"6/68"	"6"	"68"	"2062513.49725342"	"HCD"	"MS2"	"0"	"90.4"	"100.000"	"65.0058"	"21408"	"21408"	"21390"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"131.1"	""	"144.8"	""	"131.5"	""	"132.6"	""	"155.1"	"166.6"	""	"823"	"26"	"36.000"	"29.000"	"0.112039158827406"	"24"	"0.002056"	"0.02216"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPELTWER"	"[R].tPELTWER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"630.84271"	"1260.67815"	"1260.67857"	"-0.33"	"-0.00021"	"11/68"	"11"	"68"	"1454810.16015625"	"HCD"	"MS2"	"12.20472"	"70.2"	"100.000"	"65.0609"	"21416"	"21416"	"21399"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"113.3"	""	"96.8"	""	"93.2"	""	"108.5"	""	"122.8"	"135.1"	""	"819"	"28"	"36.000"	"29.000"	"0.0673370220656514"	"24"	"0.0023"	"0.02391"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPELTWER"	"[R].tPELTWER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"630.84271"	"1260.67815"	"1260.67857"	"-0.33"	"-0.00021"	"7/68"	"7"	"68"	"3319392.59466553"	"HCD"	"MS2"	"2.317536"	"133.3"	"100.000"	"65.3532"	"21534"	"21534"	"21517"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"188.3"	""	"176.0"	""	"192.6"	""	"191.5"	""	"259.5"	"258.2"	""	"819"	"26"	"36.000"	"29.000"	"0.115412781035279"	"25"	"0.004069"	"0.04462"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAADLISQAR"	"[K].sAADLISQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"630.85876"	"1260.71025"	"1260.71093"	"-0.54"	"-0.00034"	"8/88"	"8"	"88"	"1454282.07861328"	"HCD"	"MS2"	"0"	"87.6"	"100.000"	"47.6183"	"14367"	"14367"	"14349"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"117.0"	""	"112.2"	""	"110.1"	""	"146.5"	""	"153.1"	"192.3"	""	"845"	"27"	"36.000"	"29.000"	"0.0765291189131781"	"28"	"0.001211"	"0.01478"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAADLISQAR"	"[K].sAADLISQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"630.85889"	"1260.71050"	"1260.71093"	"-0.34"	"-0.00022"	"7/88"	"7"	"88"	"1281257.84686279"	"HCD"	"MS2"	"25.12398"	"78.3"	"100.000"	"47.8502"	"14450"	"14450"	"14426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"102.8"	""	"87.3"	""	"88.7"	""	"133.0"	""	"133.2"	"198.7"	""	"845"	"22"	"36.000"	"29.000"	"0.256346099251143"	"22"	"0.0008629"	"0.01071"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTELEATVR"	"[R].lTELEATVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"630.87097"	"1260.73467"	"1260.73608"	"-1.12"	"-0.00071"	"7/74"	"7"	"74"	"1376397.75970459"	"HCD"	"MS2"	"18.8021"	"70.9"	"100.000"	"75.6822"	"25734"	"25734"	"25717"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.4"	""	"94.3"	""	"95.7"	""	"120.1"	""	"136.2"	"139.3"	""	"760"	"33"	"35.000"	"28.000"	"0.0206435125967125"	"24"	"0"	"0.001101"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTELEATVR"	"[R].lTELEATVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"630.87109"	"1260.73491"	"1260.73608"	"-0.93"	"-0.00059"	"13/74"	"13"	"74"	"1550641.07019043"	"HCD"	"MS2"	"16.3725"	"70.3"	"100.000"	"75.2575"	"25573"	"25573"	"25550"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.3"	""	"87.5"	""	"98.3"	""	"121.9"	""	"135.7"	"123.7"	""	"760"	"43"	"35.000"	"28.000"	"0.00204072082620696"	"27"	"0"	"0.0004294"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTELEATVR"	"[R].lTELEATVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"630.87115"	"1260.73503"	"1260.73608"	"-0.83"	"-0.00052"	"7/74"	"7"	"74"	"1568220.25183105"	"HCD"	"MS2"	"15.61634"	"73.8"	"100.000"	"75.3893"	"25615"	"25615"	"25595"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"95.4"	""	"89.8"	""	"100.3"	""	"132.8"	""	"141.7"	"144.7"	""	"760"	"37"	"35.000"	"28.000"	"0.0079943580711126"	"26"	"0"	"0.0008206"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTELEATVR"	"[R].lTELEATVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"630.87305"	"1260.73882"	"1260.73608"	"2.17"	"0.00137"	"7/74"	"7"	"74"	"1334800.74169922"	"HCD"	"MS2"	"0"	"70.2"	"100.000"	"75.5586"	"25694"	"25694"	"25675"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"94.8"	""	"85.1"	""	"102.4"	""	"129.4"	""	"123.5"	"130.1"	""	"667"	"31"	"35.000"	"28.000"	"0.0264908466280548"	"22"	"0.0001301"	"0.004495"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APDVTADMGR"	"[K].aPDVTADMGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"631.32385"	"1261.64043"	"1261.64080"	"-0.30"	"-0.00019"	"9/80"	"9"	"80"	"2146001.96221924"	"HCD"	"MS2"	"48.1942"	"110.1"	"100.000"	"48.4907"	"14710"	"14710"	"14686"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"163.8"	""	"140.7"	""	"149.7"	""	"131.7"	""	"238.4"	"221.8"	""	"560"	"33"	"34.000"	"27.000"	"0.0143270913951286"	"21"	"0"	"0.0004357"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APDVTADMGR"	"[K].aPDVTADMGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"631.32391"	"1261.64055"	"1261.64080"	"-0.20"	"-0.00013"	"8/80"	"8"	"80"	"881855.381713867"	"HCD"	"MS2"	"9.838024"	"56.2"	"100.000"	"48.4228"	"14695"	"14695"	"14674"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"83.9"	""	"65.6"	""	"82.3"	""	"86.1"	""	"105.4"	"110.1"	""	"560"	"20"	"34.000"	"27.000"	"0.275523109613117"	"15"	"0.0002479"	"0.005877"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APDVTADMGR"	"[K].aPDVTADMGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"631.32416"	"1261.64104"	"1261.64080"	"0.19"	"0.00012"	"9/80"	"9"	"80"	"2099749.51348877"	"HCD"	"MS2"	"51.07949"	"118.5"	"100.000"	"48.1143"	"14569"	"14569"	"14546"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"206.5"	""	"145.2"	""	"156.6"	""	"152.9"	""	"241.8"	"221.6"	""	"563"	"31"	"34.000"	"27.000"	"0.0206765653886228"	"21"	"0"	"0.0007291"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APDVTADMGR"	"[K].aPDVTADMGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"631.32422"	"1261.64116"	"1261.64080"	"0.28"	"0.00018"	"9/80"	"9"	"80"	"895064.653625488"	"HCD"	"MS2"	"7.853859"	"54.2"	"100.000"	"48.7831"	"14829"	"14829"	"14808"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"84.7"	""	"67.1"	""	"78.6"	""	"75.9"	""	"108.9"	"102.6"	""	"561"	"34"	"34.000"	"27.000"	"0.0113745144193272"	"15"	"0"	"0.001283"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEGSLPESSR"	"[R].aEGSLPESSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"631.33270"	"1261.65813"	"1261.65856"	"-0.34"	"-0.00022"	"8/86"	"8"	"86"	"2708683.20288086"	"HCD"	"MS2"	"0"	"125.1"	"100.000"	"29.2435"	"6898"	"6898"	"6875"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.0"	""	"110.9"	""	"119.2"	""	"236.9"	""	"293.2"	"306.9"	""	"659"	"43"	"35.000"	"28.000"	"0.00168987826025155"	"25"	"0"	"8.88E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEGSLPESSR"	"[R].aEGSLPESSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"631.33276"	"1261.65825"	"1261.65856"	"-0.25"	"-0.00015"	"7/86"	"7"	"86"	"2824390.24029541"	"HCD"	"MS2"	"0"	"126.0"	"100.000"	"29.1902"	"6889"	"6889"	"6864"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"123.1"	""	"120.2"	""	"115.7"	""	"236.1"	""	"301.5"	"304.7"	""	"661"	"46"	"35.000"	"28.000"	"0.00079099085749198"	"24"	"0"	"0.0001431"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEQVNELK"	"[-].mEQVNELk.[E]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"631.33588"	"1261.66448"	"1261.66595"	"-1.17"	"-0.00074"	"4/74"	"4"	"74"	"670507.282653809"	"HCD"	"MS2"	"37.41971"	"31.9"	"100.000"	"80.4224"	"27651"	"27651"	"27629"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.9"	""	"38.5"	""	"45.3"	""	"42.0"	""	"59.1"	"69.9"	""	"709"	"16"	"35.000"	"28.000"	"0.915411237579963"	"21"	"0.006685"	"0.07516"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEQVNELK"	"[-].mEQVNELk.[E]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"631.33594"	"1261.66460"	"1261.66595"	"-1.07"	"-0.00068"	"5/74"	"5"	"74"	"702728.445007324"	"HCD"	"MS2"	"3.34768"	"30.1"	"100.000"	"80.7147"	"27770"	"27770"	"27751"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.3"	""	"40.0"	""	"40.0"	""	"34.3"	""	"55.7"	"67.0"	""	"709"	"34"	"35.000"	"28.000"	"0.0130802558693118"	"24"	"0.003111"	"0.03057"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEQVNELK"	"[-].mEQVNELk.[E]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"631.33600"	"1261.66472"	"1261.66595"	"-0.98"	"-0.00062"	"6/74"	"6"	"74"	"667280.600524902"	"HCD"	"MS2"	"0"	"27.4"	"100.000"	"80.7410"	"27782"	"27782"	"27770"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.2"	""	"24.9"	""	"36.1"	""	"31.6"	""	"59.3"	"65.5"	""	"724"	"31"	"35.000"	"28.000"	"0.0266506969293095"	"21"	"0.002871"	"0.02683"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEQVNELK"	"[-].mEQVNELk.[E]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"631.33636"	"1261.66545"	"1261.66595"	"-0.40"	"-0.00025"	"5/74"	"5"	"74"	"684097.663024902"	"HCD"	"MS2"	"44.04417"	"32.8"	"100.000"	"80.4508"	"27665"	"27665"	"27643"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.1"	""	"41.6"	""	"51.0"	""	"46.8"	""	"59.7"	"65.5"	""	"722"	"30"	"35.000"	"28.000"	"0.0373686322171243"	"22"	"0.002547"	"0.02527"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPESTTSVV"	"[R].vNPESTTSVV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O54924"	"Exocyst complex component 8 OS=Rattus norvegicus OX=10116 GN=Exoc8 PE=1 SV=1"	"O54924"	"Exocyst complex component 8 OS=Rattus norvegicus OX=10116 GN=Exoc8 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.34344"	"1261.67961"	"1261.68371"	"-3.25"	"-0.00205"	"6/80"	"6"	"80"	"520561.479919434"	"HCD"	"MS2"	"22.16221"	"23.7"	"100.000"	"63.7338"	"20895"	"20895"	"20872"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.8"	""	"28.4"	""	"27.7"	""	"35.7"	""	"52.1"	"52.4"	""	"779"	"34"	"35.000"	"28.000"	"0.0142727435325331"	"15"	"0.00447"	"0.04685"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPESTTSVV"	"[R].vNPESTTSVV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O54924"	"Exocyst complex component 8 OS=Rattus norvegicus OX=10116 GN=Exoc8 PE=1 SV=1"	"O54924"	"Exocyst complex component 8 OS=Rattus norvegicus OX=10116 GN=Exoc8 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.34418"	"1261.68108"	"1261.68371"	"-2.09"	"-0.00132"	"7/80"	"7"	"80"	"447945.171081543"	"HCD"	"MS2"	"28.29296"	"21.0"	"100.000"	"63.7790"	"20899"	"20899"	"20875"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.2"	""	"23.2"	""	"27.0"	""	"35.0"	"0.4"	"43.0"	"41.4"	""	"839"	"29"	"36.000"	"29.000"	"0.0588480349063742"	"14"	"0.001635"	"0.01959"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDDTNITR"	"[K].vVDDTNITR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.5476"	"0.0000"	"1"	"1"	"1"	"631.34827"	"1261.68926"	"1261.69495"	"-4.51"	"-0.00284"	"7/80"	"7"	"80"	"3815434.35174561"	"HCD"	"MS2"	"40.85627"	"202.2"	"100.000"	"42.8751"	"12441"	"12441"	"12419"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"315.4"	""	"249.4"	""	"270.2"	""	"323.8"	""	"359.3"	"401.2"	""	"816"	"42"	"36.000"	"29.000"	"0.00265864384776824"	""	"0"	"0.001032"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDDTNITR"	"[K].vVDDTNITR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.5610"	"0.0000"	"1"	"1"	"1"	"631.34857"	"1261.68987"	"1261.69495"	"-4.03"	"-0.00254"	"7/80"	"7"	"80"	"4975617.56622314"	"HCD"	"MS2"	"23.22302"	"239.7"	"100.000"	"43.0387"	"12497"	"12497"	"12476"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"367.2"	""	"278.7"	""	"322.6"	""	"386.8"	""	"424.3"	"492.4"	""	"832"	"41"	"36.000"	"29.000"	"0.00358173400908794"	""	"0"	"0.002047"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SASPDAAGK"	"[K].sASPDAAGk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"631.36053"	"1261.71379"	"1261.71524"	"-1.14"	"-0.00072"	"7/72"	"7"	"72"	"1004651.57836914"	"HCD"	"MS2"	"0"	"84.1"	"100.000"	"27.2962"	"6120"	"6120"	"6096"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"114.1"	""	"119.8"	""	"114.1"	""	"137.9"	""	"148.8"	"162.6"	""	"868"	"33"	"36.000"	"29.000"	"0.0214037430916442"	"25"	"0.001211"	"0.01546"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVVTGTLER"	"[R].gTVVTGTLER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"631.36871"	"1261.73015"	"1261.73133"	"-0.94"	"-0.00059"	"8/86"	"8"	"86"	"2934168.66717529"	"HCD"	"MS2"	"40.31509"	"165.6"	"100.000"	"44.2091"	"12983"	"12983"	"12961"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"217.6"	""	"224.0"	""	"242.7"	""	"275.6"	""	"318.9"	"292.5"	""	"844"	"51"	"36.000"	"29.000"	"0.000356707672657643"	"22"	"0"	"4.498E-05"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVVTGTLER"	"[R].gTVVTGTLER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"631.36877"	"1261.73027"	"1261.73133"	"-0.84"	"-0.00053"	"8/86"	"8"	"86"	"2894441.04431152"	"HCD"	"MS2"	"0"	"136.5"	"100.000"	"44.6391"	"13142"	"13142"	"13123"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"207.1"	""	"186.4"	""	"205.8"	""	"222.7"	""	"237.5"	"233.3"	""	"844"	"57"	"36.000"	"29.000"	"7.66147609690264E-05"	"23"	"0"	"7.322E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVVTGTLER"	"[R].gTVVTGTLER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"631.36884"	"1261.73039"	"1261.73133"	"-0.74"	"-0.00047"	"8/86"	"8"	"86"	"3240707.41394043"	"HCD"	"MS2"	"2.81996"	"148.8"	"100.000"	"44.5018"	"13098"	"13098"	"13080"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"212.1"	""	"212.4"	""	"232.4"	""	"222.4"	"0.9"	"261.3"	"267.3"	""	"843"	"49"	"36.000"	"29.000"	"0.000495219319407012"	"23"	"0"	"6.797E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVVTGTLER"	"[R].gTVVTGTLER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"631.36908"	"1261.73088"	"1261.73133"	"-0.36"	"-0.00022"	"8/86"	"8"	"86"	"3026000.51702881"	"HCD"	"MS2"	"41.58437"	"160.7"	"100.000"	"44.3494"	"13025"	"13025"	"13003"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"212.4"	""	"236.8"	""	"233.7"	""	"270.5"	"1.0"	"282.3"	"284.6"	""	"843"	"47"	"36.000"	"29.000"	"0.000814324645622633"	"20"	"0"	"8.276E-05"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ADILEDK"	"[R].aDILEDk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"631.37262"	"1261.73796"	"1261.74039"	"-1.92"	"-0.00121"	"6/56"	"6"	"56"	"1090551.15362549"	"HCD"	"MS2"	"19.27211"	"61.0"	"100.000"	"67.9707"	"22615"	"22615"	"22594"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.7"	""	"46.2"	""	"61.9"	""	"138.2"	""	"141.2"	"142.0"	""	"868"	"20"	"36.000"	"29.000"	"0.429032043081112"	"21"	"0.008522"	"0.1061"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVSDVQK"	"[R].qVSDVQk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"631.37860"	"1261.74993"	"1261.75162"	"-1.34"	"-0.00085"	"6/62"	"6"	"62"	"921029.410583496"	"HCD"	"MS2"	"11.84013"	"77.9"	"100.000"	"34.8123"	"9163"	"9163"	"9144"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"124.1"	""	"90.3"	""	"91.6"	""	"131.0"	"2.0"	"143.1"	"156.2"	""	"687"	"33"	"35.000"	"28.000"	"0.0184046151855833"	"20"	"0.002711"	"0.02612"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQGAALEK"	"[K].sQGAALEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"631.37872"	"1261.75017"	"1261.75162"	"-1.15"	"-0.00073"	"7/80"	"7"	"80"	"1713043.6918335"	"HCD"	"MS2"	"18.81281"	"126.8"	"100.000"	"35.8550"	"9587"	"9587"	"9562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"209.8"	""	"164.5"	""	"186.0"	""	"197.6"	"1.3"	"205.9"	"234.8"	""	"653"	"27"	"35.000"	"28.000"	"0.0602397534362098"	"22"	"0.0004639"	"0.007852"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQGAALEK"	"[K].sQGAALEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"631.37921"	"1261.75115"	"1261.75162"	"-0.38"	"-0.00024"	"7/80"	"7"	"80"	"7763040.14831543"	"HCD"	"MS2"	"36.5682"	"492.5"	"100.000"	"35.5363"	"9458"	"9458"	"9447"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"877.1"	""	"662.9"	""	"731.0"	""	"697.5"	""	"773.4"	"918.1"	""	"647"	"30"	"35.000"	"28.000"	"0.0352268885193366"	"24"	"0.0004639"	"0.007992"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQGAALEK"	"[K].sQGAALEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"631.37939"	"1261.75151"	"1261.75162"	"-0.09"	"-0.00005"	"7/80"	"7"	"80"	"2271888.98175049"	"HCD"	"MS2"	"8.696259"	"170.4"	"100.000"	"35.9441"	"9618"	"9618"	"9601"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"260.2"	""	"200.5"	""	"236.8"	""	"280.4"	"0.2"	"294.1"	"342.2"	""	"635"	"37"	"35.000"	"28.000"	"0.00607776256194195"	""	"0.0001301"	"0.004092"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSNNIK"	"[K].eVSNNIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"631.37939"	"1261.75151"	"1261.75162"	"-0.09"	"-0.00005"	"6/58"	"6"	"58"	"1597886.71429443"	"HCD"	"MS2"	"23.26813"	"131.0"	"100.000"	"36.8587"	"9995"	"9995"	"9969"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"186.5"	""	"172.5"	""	"178.8"	""	"219.5"	""	"240.3"	"244.3"	""	"635"	"31"	"35.000"	"28.000"	"0.0235366001613041"	"25"	"0.003581"	"0.03724"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSNNIK"	"[K].eVSNNIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"631.37952"	"1261.75176"	"1261.75162"	"0.11"	"0.00007"	"6/58"	"6"	"58"	"1532274.85974121"	"HCD"	"MS2"	"26.50856"	"135.1"	"100.000"	"37.0598"	"10071"	"10071"	"10050"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"199.2"	""	"161.2"	""	"174.5"	""	"225.0"	"3.6"	"263.1"	"254.2"	""	"645"	"30"	"35.000"	"28.000"	"0.0353614218256177"	"24"	"0.003967"	"0.0419"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQGAALEK"	"[K].sQGAALEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"631.37976"	"1261.75224"	"1261.75162"	"0.49"	"0.00031"	"7/80"	"7"	"80"	"6865064.12866211"	"HCD"	"MS2"	"48.80153"	"446.6"	"100.000"	"35.6548"	"9501"	"9501"	"9487"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"798.7"	""	"604.7"	""	"675.8"	""	"614.5"	""	"691.2"	"840.2"	""	"645"	"25"	"35.000"	"28.000"	"0.112080412065434"	"23"	"0.0005778"	"0.008111"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVSDVQK"	"[R].qVSDVQk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"631.37988"	"1261.75249"	"1261.75162"	"0.69"	"0.00043"	"6/62"	"6"	"62"	"898097.916320801"	"HCD"	"MS2"	"0"	"74.3"	"100.000"	"34.9723"	"9223"	"9223"	"9199"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"126.7"	""	"79.1"	""	"78.5"	""	"129.8"	""	"145.7"	"145.2"	""	"646"	"30"	"35.000"	"28.000"	"0.0339783685244901"	"18"	"0.003111"	"0.0313"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETEILAK"	"[K].eTEILAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"631.39117"	"1261.77507"	"1261.77677"	"-1.35"	"-0.00085"	"6/52"	"6"	"52"	"495771.647583008"	"HCD"	"MS2"	"29.49392"	"35.6"	"100.000"	"57.8049"	"18503"	"18503"	"18482"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.4"	""	"39.0"	""	"49.8"	""	"63.1"	""	"66.0"	"69.9"	""	"639"	"18"	"35.000"	"28.000"	"0.542588846961528"	"23"	"0.004817"	"0.05055"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETEILAK"	"[K].eTEILAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"631.39221"	"1261.77715"	"1261.77677"	"0.30"	"0.00019"	"6/52"	"6"	"52"	"816648.533569336"	"HCD"	"MS2"	"15.34822"	"62.8"	"100.000"	"57.4848"	"18373"	"18373"	"18351"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"93.2"	""	"74.3"	""	"83.1"	""	"109.9"	""	"116.1"	"119.8"	""	"520"	"36"	"34.000"	"27.000"	"0.00641170227680928"	"25"	"0.000936"	"0.01289"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETEILAK"	"[K].eTEILAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"631.39221"	"1261.77715"	"1261.77677"	"0.30"	"0.00019"	"6/52"	"6"	"52"	"947698.708435059"	"HCD"	"MS2"	"19.51676"	"69.7"	"100.000"	"57.3077"	"18315"	"18315"	"18297"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"92.5"	""	"89.3"	""	"103.3"	""	"111.4"	""	"119.9"	"145.4"	""	"520"	"35"	"34.000"	"27.000"	"0.00874930080376276"	"25"	"0.000936"	"0.01253"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLQEDELR"	"[K].mLQEDELR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P84083"	"ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P84083"	"ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"631.83398"	"1262.66069"	"1262.66120"	"-0.40"	"-0.00026"	"6/70"	"6"	"70"	"1731663.80535889"	"HCD"	"MS2"	"32.95415"	"105.3"	"100.000"	"56.1077"	"17826"	"17826"	"17805"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"156.5"	""	"139.6"	""	"152.7"	""	"144.5"	""	"199.7"	"206.3"	""	"740"	"30"	"35.000"	"28.000"	"0.0339783060698925"	""	"0.0008629"	"0.009507"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLQEDELR"	"[K].mLQEDELR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P84083"	"ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P84083"	"ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"631.83405"	"1262.66081"	"1262.66120"	"-0.31"	"-0.00019"	"6/70"	"6"	"70"	"955249.42388916"	"HCD"	"MS2"	"51.20762"	"57.6"	"100.000"	"56.4441"	"17963"	"17963"	"17942"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.1"	""	"82.6"	""	"79.9"	""	"77.0"	"0.3"	"117.9"	"98.6"	""	"742"	"17"	"35.000"	"28.000"	"0.661262522723241"	"22"	"0.007627"	"0.09389"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLQEDELR"	"[K].mLQEDELR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P84083"	"ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P84083"	"ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"631.83435"	"1262.66142"	"1262.66120"	"0.18"	"0.00011"	"6/70"	"6"	"70"	"1388701.49523926"	"HCD"	"MS2"	"32.453"	"77.7"	"100.000"	"56.5501"	"17992"	"17992"	"17972"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"121.6"	""	"103.5"	""	"123.6"	""	"91.1"	"1.5"	"154.9"	"140.1"	""	"756"	"28"	"35.000"	"28.000"	"0.0603242317655485"	"27"	"0.002973"	"0.0292"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLQEDELR"	"[K].mLQEDELR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P84083"	"ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P84083"	"ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"631.83441"	"1262.66155"	"1262.66120"	"0.27"	"0.00017"	"12/70"	"12"	"70"	"1425455.84783936"	"HCD"	"MS2"	"38.91999"	"88.7"	"100.000"	"56.2550"	"17872"	"17872"	"17851"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"145.2"	""	"111.2"	""	"123.5"	""	"116.8"	"2.4"	"183.5"	"158.4"	""	"756"	"32"	"35.000"	"28.000"	"0.0246883348900744"	"26"	"0.0002479"	"0.005336"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLQGESSSLR"	"[R].gLQGESSSLR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P27926"	"Hexokinase-3 OS=Rattus norvegicus OX=10116 GN=Hk3 PE=2 SV=1"	"P27926"	"Hexokinase-3 OS=Rattus norvegicus OX=10116 GN=Hk3 PE=2 SV=1"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"631.84784"	"1262.68840"	"1262.69019"	"-1.42"	"-0.00090"	"8/92"	"8"	"92"	"872935.365905762"	"HCD"	"MS2"	"0"	"65.0"	"100.000"	"34.3172"	"8963"	"8963"	"8935"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"106.5"	""	"66.3"	""	"81.5"	""	"109.6"	"2.8"	"126.6"	"123.2"	""	"868"	"31"	"36.000"	"29.000"	"0.03108062400324"	"17"	"0"	"0.001452"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLQGESSSLR"	"[R].gLQGESSSLR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P27926"	"Hexokinase-3 OS=Rattus norvegicus OX=10116 GN=Hk3 PE=2 SV=1"	"P27926"	"Hexokinase-3 OS=Rattus norvegicus OX=10116 GN=Hk3 PE=2 SV=1"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"631.84851"	"1262.68974"	"1262.69019"	"-0.36"	"-0.00023"	"7/92"	"7"	"92"	"776233.427490234"	"HCD"	"MS2"	"7.659134"	"61.8"	"100.000"	"34.3698"	"8978"	"8978"	"8951"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"84.4"	""	"74.1"	""	"70.8"	""	"107.3"	"0.5"	"122.9"	"126.9"	""	"872"	"28"	"36.000"	"29.000"	"0.065536989721525"	"17"	"0"	"0.0008425"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GADELPYLR"	"[K].gADELPYLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJH5"	"6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Rattus norvegicus OX=10116 GN=Pfkfb2 PE=1 SV=1"	"Q9JJH5"	"6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Rattus norvegicus OX=10116 GN=Pfkfb2 PE=1 SV=1"	"0"	"2"	"2"	"0.3462"	"0.0000"	"1"	"1"	"1"	"631.84979"	"1262.69231"	"1262.69422"	"-1.51"	"-0.00095"	"8/66"	"8"	"66"	"600344.650695801"	"HCD"	"MS2"	"0"	"36.3"	"100.000"	"70.1897"	"23506"	"23506"	"23477"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.5"	""	"50.2"	""	"52.1"	""	"61.0"	""	"63.6"	"64.8"	""	"898"	"26"	"36.000"	"29.000"	"0.101916931849584"	""	"0.0006732"	"0.009165"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GADELPYLR"	"[K].gADELPYLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJH5"	"6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Rattus norvegicus OX=10116 GN=Pfkfb2 PE=1 SV=1"	"Q9JJH5"	"6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Rattus norvegicus OX=10116 GN=Pfkfb2 PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"631.84998"	"1262.69267"	"1262.69422"	"-1.22"	"-0.00077"	"7/66"	"7"	"66"	"580094.8515625"	"HCD"	"MS2"	"0"	"35.8"	"100.000"	"70.0611"	"23468"	"23468"	"23437"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.1"	""	"37.1"	""	"50.6"	""	"61.2"	"0.9"	"62.9"	"60.8"	""	"912"	"20"	"36.000"	"29.000"	"0.418759663996512"	"29"	"0.002871"	"0.02701"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GADELPYLR"	"[K].gADELPYLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJH5"	"6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Rattus norvegicus OX=10116 GN=Pfkfb2 PE=1 SV=1"	"Q9JJH5"	"6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Rattus norvegicus OX=10116 GN=Pfkfb2 PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"631.85022"	"1262.69316"	"1262.69422"	"-0.84"	"-0.00053"	"6/66"	"6"	"66"	"444230.343688965"	"HCD"	"MS2"	"6.501971"	"30.0"	"100.000"	"70.3912"	"23602"	"23602"	"23576"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.2"	""	"35.4"	""	"41.8"	""	"57.1"	""	"50.2"	"58.5"	""	"873"	"21"	"36.000"	"29.000"	"0.382810858429196"	"21"	"0.008668"	"0.1111"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GADELPYLR"	"[K].gADELPYLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJH5"	"6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Rattus norvegicus OX=10116 GN=Pfkfb2 PE=1 SV=1"	"Q9JJH5"	"6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Rattus norvegicus OX=10116 GN=Pfkfb2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"631.85065"	"1262.69402"	"1262.69422"	"-0.16"	"-0.00010"	"6/66"	"6"	"66"	"486398.166809082"	"HCD"	"MS2"	"13.06732"	"32.2"	"100.000"	"70.4898"	"23628"	"23628"	"23605"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.4"	""	"41.4"	""	"46.7"	""	"55.8"	""	"55.5"	"62.4"	""	"873"	"25"	"36.000"	"29.000"	"0.154876044400456"	"22"	"0.003449"	"0.03359"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEAEEAK"	"[R].qEAEEAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"631.85242"	"1262.69756"	"1262.69925"	"-1.34"	"-0.00085"	"6/66"	"6"	"66"	"1358260.86004639"	"HCD"	"MS2"	"0"	"107.7"	"100.000"	"24.7774"	"5085"	"5085"	"5064"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"144.4"	""	"79.3"	""	"105.2"	""	"210.7"	""	"235.8"	"250.3"	""	"902"	"30"	"36.000"	"29.000"	"0.0402880773163716"	"29"	"0.00447"	"0.04815"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEAEEAK"	"[R].qEAEEAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"631.85315"	"1262.69902"	"1262.69925"	"-0.18"	"-0.00012"	"6/66"	"6"	"66"	"2032442.5814209"	"HCD"	"MS2"	"23.54925"	"168.6"	"100.000"	"24.7219"	"5078"	"5078"	"5055"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"228.5"	""	"141.6"	""	"149.5"	""	"315.2"	"0.1"	"388.7"	"380.6"	""	"872"	"31"	"36.000"	"29.000"	"0.0388585409026313"	"29"	"0.003967"	"0.04211"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGQQEGAK"	"[K].sGQQEGAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"631.85864"	"1262.71001"	"1262.71049"	"-0.38"	"-0.00024"	"7/74"	"7"	"74"	"8259283.4241333"	"HCD"	"MS2"	"0"	"627.6"	"100.000"	"20.9085"	"3538"	"3538"	"3520"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1026.2"	""	"752.7"	""	"860.8"	""	"947.5"	""	"1125.3"	"1240.1"	""	"801"	"25"	"36.000"	"29.000"	"0.119015224571108"	"25"	"0.001374"	"0.01652"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGQQEGAK"	"[K].sGQQEGAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"631.85907"	"1262.71086"	"1262.71049"	"0.30"	"0.00019"	"7/74"	"7"	"74"	"5627538.07116699"	"HCD"	"MS2"	"0"	"431.2"	"100.000"	"20.9526"	"3539"	"3539"	"3523"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"730.4"	""	"531.9"	""	"575.1"	""	"660.6"	""	"756.4"	"832.4"	""	"883"	"41"	"36.000"	"29.000"	"0.0033568405126909"	"26"	"0.0002479"	"0.005659"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"631.87018"	"1262.73308"	"1262.73564"	"-2.03"	"-0.00128"	"6/56"	"6"	"56"	"510255.450866699"	"HCD"	"MS2"	"0"	"43.0"	"100.000"	"27.8363"	"6325"	"6325"	"6294"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.7"	""	"70.9"	""	"68.8"	""	"61.2"	"0.5"	"69.1"	"67.4"	""	"792"	"15"	"35.000"	"28.000"	"1.35736043472394"	"25"	"0.005921"	"0.06884"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"631.87054"	"1262.73381"	"1262.73564"	"-1.45"	"-0.00091"	"6/56"	"6"	"56"	"1926541.85314941"	"HCD"	"MS2"	"5.11621"	"154.7"	"100.000"	"39.0018"	"10863"	"10863"	"10844"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"281.1"	""	"199.0"	""	"185.5"	""	"235.6"	"2.7"	"280.3"	"280.7"	""	"792"	"35"	"35.000"	"28.000"	"0.0135112393002284"	""	"0.00387"	"0.03923"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"631.87061"	"1262.73393"	"1262.73564"	"-1.35"	"-0.00085"	"6/56"	"6"	"56"	"19212389.5488892"	"HCD"	"MS2"	"8.950967"	"1397.3"	"100.000"	"37.1095"	"10097"	"10097"	"10074"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2712.9"	""	"2049.0"	""	"1580.6"	""	"2157.3"	""	"2466.2"	"2259.1"	""	"796"	"32"	"35.000"	"29.000"	"0.0245970527255089"	"27"	"0.006834"	"0.07981"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDNVK"	"[R].sEIDNVk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6Q2"	"Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1"	"Q6P6Q2"	"Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"631.87079"	"1262.73430"	"1262.73564"	"-1.06"	"-0.00067"	"6/58"	"6"	"58"	"1462588.04595947"	"HCD"	"MS2"	"0"	"128.8"	"100.000"	"42.7232"	"12379"	"12379"	"12360"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"193.0"	""	"131.1"	"2.4"	"144.3"	""	"226.5"	"0.0"	"319.9"	"206.4"	""	"753"	"27"	"35.000"	"28.000"	"0.0730743532913681"	""	"0.00413"	"0.04559"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"631.87085"	"1262.73442"	"1262.73564"	"-0.96"	"-0.00061"	"12/56"	"12"	"56"	"16302623.6210938"	"HCD"	"MS2"	"0"	"1162.4"	"100.000"	"37.3080"	"10172"	"10172"	"10157"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2271.6"	""	"1660.0"	""	"1343.0"	""	"1769.1"	"2.3"	"2105.2"	"1843.0"	""	"753"	"35"	"35.000"	"28.000"	"0.0117426192841137"	"27"	"0.004942"	"0.05599"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5676"	"0.0000"	"1"	"1"	"1"	"631.87091"	"1262.73454"	"1262.73564"	"-0.87"	"-0.00055"	"12/56"	"12"	"56"	"23271473.0430908"	"HCD"	"MS2"	"0"	"561.7"	"33.566"	"37.9420"	"10431"	"10431"	"10417"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"947.5"	""	"762.2"	""	"744.2"	""	"800.8"	""	"1070.9"	"998.5"	""	"753"	"37"	"35.000"	"28.000"	"0.00788433339627861"	""	"0.004942"	"0.05397"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"631.87109"	"1262.73491"	"1262.73564"	"-0.58"	"-0.00036"	"12/56"	"12"	"56"	"5356345.92810059"	"HCD"	"MS2"	"0.7929517"	"404.8"	"100.000"	"38.3902"	"10614"	"10614"	"10599"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"658.5"	""	"759.2"	""	"490.5"	""	"513.4"	"2.3"	"740.1"	"667.2"	""	"753"	"38"	"35.000"	"28.000"	"0.00565932950232894"	""	"0.004069"	"0.04386"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5143"	"0.0000"	"1"	"1"	"1"	"631.87122"	"1262.73516"	"1262.73564"	"-0.38"	"-0.00024"	"6/56"	"6"	"56"	"2887437.42816162"	"HCD"	"MS2"	"0"	"228.6"	"100.000"	"38.7009"	"10740"	"10740"	"10720"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"379.5"	""	"330.1"	""	"281.3"	""	"338.8"	""	"434.6"	"401.4"	""	"753"	"35"	"35.000"	"28.000"	"0.0131451328777688"	""	"0.004022"	"0.0435"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.4857"	"0.0000"	"1"	"1"	"1"	"631.87122"	"1262.73516"	"1262.73564"	"-0.38"	"-0.00024"	"6/56"	"6"	"56"	"3941905.45178223"	"HCD"	"MS2"	"0"	"311.5"	"100.000"	"38.6668"	"10717"	"10717"	"10700"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"543.3"	""	"489.6"	""	"378.6"	""	"428.2"	""	"579.7"	"532.2"	""	"753"	"35"	"35.000"	"28.000"	"0.0124098056634813"	""	"0.004069"	"0.04423"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5152"	"0.0000"	"1"	"1"	"1"	"631.87128"	"1262.73528"	"1262.73564"	"-0.29"	"-0.00018"	"6/56"	"6"	"56"	"1769563.54418945"	"HCD"	"MS2"	"0"	"148.1"	"100.000"	"39.2947"	"10973"	"10973"	"10956"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"253.5"	""	"194.3"	""	"187.2"	""	"224.3"	""	"273.4"	"270.5"	""	"753"	"33"	"35.000"	"28.000"	"0.0183977613292577"	""	"0.003449"	"0.03529"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"631.87128"	"1262.73528"	"1262.73564"	"-0.29"	"-0.00018"	"6/56"	"6"	"56"	"8864584.54412842"	"HCD"	"MS2"	"0"	"693.7"	"100.000"	"38.2852"	"10563"	"10563"	"10546"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1223.4"	""	"1011.6"	""	"874.2"	""	"986.8"	"7.1"	"1263.6"	"1199.1"	""	"753"	"32"	"35.000"	"28.000"	"0.024875108317486"	""	"0.005183"	"0.05894"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDNVK"	"[R].sEIDNVk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6Q2"	"Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1"	"Q6P6Q2"	"Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"631.87152"	"1262.73577"	"1262.73564"	"0.10"	"0.00006"	"5/58"	"5"	"58"	"1246745.55377197"	"HCD"	"MS2"	"0"	"114.7"	"100.000"	"42.8914"	"12437"	"12437"	"12416"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"175.3"	""	"121.4"	""	"131.6"	""	"194.1"	"0.1"	"271.9"	"194.5"	""	"705"	"13"	"35.000"	"28.000"	"1.68329068964336"	"21"	"0.008641"	"0.1067"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5152"	"0.0000"	"1"	"1"	"1"	"631.87183"	"1262.73638"	"1262.73564"	"0.58"	"0.00037"	"6/56"	"6"	"56"	"2512271.73980713"	"HCD"	"MS2"	"0"	"204.0"	"100.000"	"38.9683"	"10840"	"10840"	"10821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"348.0"	""	"270.9"	""	"268.3"	""	"319.3"	"0.7"	"388.1"	"336.1"	""	"705"	"33"	"35.000"	"28.000"	"0.0179126203502598"	""	"0.003922"	"0.03942"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"631.87195"	"1262.73662"	"1262.73564"	"0.78"	"0.00049"	"12/56"	"12"	"56"	"89864557.8774414"	"HCD"	"MS2"	"0"	"690.6"	"10.716"	"38.0027"	"10448"	"10448"	"10436"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1184.2"	""	"920.4"	""	"862.0"	""	"958.0"	""	"1354.4"	"1269.4"	""	"704"	"35"	"35.000"	"28.000"	"0.0107039152903805"	""	"0.008522"	"0.106"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"631.87207"	"1262.73686"	"1262.73564"	"0.97"	"0.00061"	"12/56"	"12"	"56"	"568980091.003906"	"HCD"	"MS2"	"0"	"794.9"	"1.905"	"37.7046"	"10330"	"10330"	"10318"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1411.4"	""	"1078.7"	""	"982.7"	""	"1146.0"	""	"1516.5"	"1402.0"	""	"704"	"35"	"35.000"	"28.000"	"0.0107533223185186"	""	"0.008003"	"0.09763"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"631.87280"	"1262.73833"	"1262.73564"	"2.13"	"0.00135"	"12/56"	"12"	"56"	"316321657.46875"	"HCD"	"MS2"	"0"	"759.8"	"3.344"	"37.6574"	"10316"	"10316"	"10305"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1351.4"	""	"1007.4"	""	"963.6"	""	"1085.8"	""	"1451.1"	"1341.5"	""	"700"	"35"	"35.000"	"28.000"	"0.0105212670591988"	""	"0.008641"	"0.1071"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHFEEAMR"	"[R].dHFEEAMR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"632.30237"	"1263.59746"	"1263.59894"	"-1.17"	"-0.00074"	"6/64"	"6"	"64"	"553715.208679199"	"HCD"	"MS2"	"46.94701"	"44.8"	"100.000"	"32.1574"	"8083"	"8083"	"8054"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.8"	""	"47.5"	""	"56.7"	""	"73.8"	"1.3"	"93.5"	"88.1"	""	"327"	"17"	"32.000"	"25.000"	"0.315150323306718"	"14"	"0.002547"	"0.02514"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHFEEAMR"	"[R].dHFEEAMR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"632.30249"	"1263.59770"	"1263.59894"	"-0.98"	"-0.00062"	"7/64"	"7"	"64"	"493089.452392578"	"HCD"	"MS2"	"0"	"36.2"	"100.000"	"32.1591"	"8091"	"8091"	"8068"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.8"	""	"39.0"	""	"45.3"	""	"59.5"	"1.5"	"77.9"	"66.4"	""	"328"	"15"	"32.000"	"25.000"	"0.487353229205037"	"13"	"0.001211"	"0.01409"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMPTSGALDR"	"[R].sMPTSGALDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"632.33130"	"1263.65532"	"1263.65645"	"-0.90"	"-0.00057"	"9/88"	"9"	"88"	"2539869.12451172"	"HCD"	"MS2"	"37.31484"	"145.3"	"100.000"	"41.8953"	"12041"	"12041"	"12015"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"232.6"	""	"195.2"	""	"186.2"	""	"208.5"	"0.2"	"244.9"	"309.1"	""	"708"	"49"	"35.000"	"28.000"	"0.00048417600426093"	"20"	"0"	"9.955E-05"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDDMLITGGR"	"[R].gDDMLITGGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"632.33136"	"1263.65544"	"1263.65645"	"-0.80"	"-0.00050"	"8/82"	"8"	"82"	"1983273.03015137"	"HCD"	"MS2"	"25.10583"	"94.8"	"100.000"	"55.3864"	"17518"	"17518"	"17495"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"136.5"	""	"129.7"	""	"142.4"	""	"138.9"	""	"179.4"	"171.6"	""	"707"	"27"	"35.000"	"28.000"	"0.0721754363440679"	"25"	"0"	"0.0001534"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDDMLITGGR"	"[R].gDDMLITGGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"632.33154"	"1263.65581"	"1263.65645"	"-0.51"	"-0.00032"	"9/82"	"9"	"82"	"2170569.72320557"	"HCD"	"MS2"	"20.75133"	"114.7"	"100.000"	"55.2254"	"17466"	"17466"	"17447"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"174.9"	""	"155.8"	""	"183.5"	""	"161.1"	""	"207.0"	"205.8"	""	"707"	"26"	"35.000"	"28.000"	"0.0806100922452148"	"26"	"0"	"0.0003436"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMPTSGALDR"	"[R].sMPTSGALDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"632.33276"	"1263.65825"	"1263.65645"	"1.42"	"0.00090"	"9/88"	"9"	"88"	"3328567.82281494"	"HCD"	"MS2"	"21.84353"	"169.9"	"100.000"	"42.0822"	"12107"	"12107"	"12081"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"303.5"	""	"216.0"	""	"233.7"	""	"218.9"	""	"265.0"	"372.7"	""	"750"	"48"	"35.000"	"28.000"	"0.00056238181331339"	"19"	"0"	"0.000103"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVEAVSPNR"	"[K].yVEAVSPNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"3"	"632.34711"	"1263.68694"	"1263.68947"	"-2.00"	"-0.00126"	"6/72"	"6"	"72"	"6178685.23748779"	"HCD"	"MS2"	"14.69917"	"437.3"	"100.000"	"40.9605"	"11661"	"11661"	"11646"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"550.9"	""	"457.5"	""	"463.3"	""	"825.9"	""	"961.2"	"898.6"	""	"829"	"13"	"36.000"	"29.000"	"2.16035207753056"	"19"	"0.009363"	"0.1224"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGELMTVAR"	"[R].aSGELMTVAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"632.34937"	"1263.69145"	"1263.69284"	"-1.09"	"-0.00069"	"9/82"	"9"	"82"	"1636994.31707764"	"HCD"	"MS2"	"5.782516"	"97.0"	"100.000"	"50.4812"	"15533"	"15533"	"15515"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"171.5"	""	"137.3"	""	"140.1"	""	"112.3"	"0.2"	"181.8"	"174.7"	""	"777"	"39"	"35.000"	"28.000"	"0.00503954146777267"	"22"	"0"	"0.0001689"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGELMTVAR"	"[R].aSGELMTVAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"632.35010"	"1263.69292"	"1263.69284"	"0.06"	"0.00004"	"9/82"	"9"	"82"	"1563637.98199463"	"HCD"	"MS2"	"0"	"97.1"	"100.000"	"50.8363"	"15667"	"15667"	"15649"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"169.5"	""	"140.4"	""	"144.9"	""	"114.9"	"1.2"	"171.4"	"176.9"	""	"834"	"37"	"36.000"	"29.000"	"0.00744965318713305"	"20"	"0"	"0.000177"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALTEDK"	"[K].eALTEDk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"632.36285"	"1263.71843"	"1263.71965"	"-0.97"	"-0.00061"	"6/58"	"6"	"58"	"5235123.80963135"	"HCD"	"MS2"	"47.49862"	"369.9"	"100.000"	"41.1977"	"11747"	"11747"	"11728"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"439.9"	""	"352.7"	""	"420.8"	""	"700.1"	""	"828.6"	"782.4"	""	"791"	"17"	"35.000"	"28.000"	"0.714737366837322"	"23"	"0.008052"	"0.09947"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALTEDK"	"[K].eALTEDk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"632.36292"	"1263.71855"	"1263.71965"	"-0.87"	"-0.00055"	"6/58"	"6"	"58"	"4614663.50177002"	"HCD"	"MS2"	"35.66922"	"325.3"	"100.000"	"41.0498"	"11696"	"11696"	"11683"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"361.3"	""	"327.8"	""	"366.6"	""	"573.9"	""	"754.0"	"714.8"	""	"791"	"19"	"35.000"	"28.000"	"0.50367046854209"	"23"	"0.007413"	"0.08802"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEDEAK"	"[K].tLEDEAk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"632.36395"	"1263.72063"	"1263.71965"	"0.77"	"0.00049"	"10/56"	"10"	"56"	"7821336.49255371"	"HCD"	"MS2"	"3.818747"	"641.4"	"100.000"	"40.4534"	"11446"	"11446"	"11426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"732.6"	""	"784.0"	""	"752.2"	""	"1161.6"	""	"1506.0"	"1165.1"	""	"757"	"22"	"35.000"	"28.000"	"0.253551324664155"	"18"	"0.009478"	"0.1249"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTPPADPPR"	"[K].aLTPPADPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1Z9"	"PDZ and LIM domain protein 7 OS=Rattus norvegicus OX=10116 GN=Pdlim7 PE=1 SV=1"	"Q9Z1Z9"	"PDZ and LIM domain protein 7 OS=Rattus norvegicus OX=10116 GN=Pdlim7 PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"632.36609"	"1263.72490"	"1263.72585"	"-0.75"	"-0.00048"	"8/80"	"8"	"80"	"1110165.15917969"	"HCD"	"MS2"	"14.01204"	"64.8"	"100.000"	"46.2486"	"13798"	"13798"	"13773"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.9"	""	"81.9"	""	"86.5"	""	"106.4"	""	"136.5"	"120.8"	""	"748"	"17"	"35.000"	"28.000"	"0.779599590278387"	"16"	"0.006958"	"0.08111"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDAMLLK"	"[K].dDAMLLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"632.37115"	"1263.73503"	"1263.73828"	"-2.57"	"-0.00162"	"6/50"	"6"	"50"	"529024.19708252"	"HCD"	"MS2"	"0"	"38.3"	"100.000"	"71.7658"	"24149"	"24149"	"24120"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.3"	""	"52.1"	""	"60.0"	""	"43.0"	""	"75.6"	"68.2"	""	"737"	"22"	"35.000"	"28.000"	"0.211075337418278"	"25"	"0.004542"	"0.0493"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDAMLLK"	"[K].dDAMLLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"632.37201"	"1263.73674"	"1263.73828"	"-1.22"	"-0.00077"	"6/50"	"6"	"50"	"539294.171936035"	"HCD"	"MS2"	"15.95223"	"38.8"	"100.000"	"71.6467"	"24114"	"24114"	"24090"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"64.9"	""	"57.3"	""	"57.7"	""	"43.5"	""	"69.9"	"76.9"	""	"696"	"22"	"35.000"	"28.000"	"0.204446294680362"	"25"	"0.002973"	"0.03037"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDAMLLK"	"[K].dDAMLLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"632.37231"	"1263.73735"	"1263.73828"	"-0.73"	"-0.00046"	"5/50"	"5"	"50"	"677138.336669922"	"HCD"	"MS2"	"16.63377"	"52.5"	"100.000"	"72.0703"	"24272"	"24272"	"24250"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"89.7"	""	"70.1"	""	"69.7"	""	"59.0"	""	"97.2"	"116.2"	""	"744"	"30"	"35.000"	"28.000"	"0.0343987720705018"	"28"	"0.001886"	"0.02143"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDAMLLK"	"[K].dDAMLLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"632.37231"	"1263.73735"	"1263.73828"	"-0.73"	"-0.00046"	"5/50"	"5"	"50"	"728946.417602539"	"HCD"	"MS2"	"11.58067"	"56.0"	"100.000"	"71.9394"	"24232"	"24232"	"24214"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.0"	""	"69.3"	""	"85.4"	""	"67.7"	"0.3"	"103.7"	"114.5"	""	"744"	"30"	"35.000"	"28.000"	"0.0391329817062238"	"28"	"0.001886"	"0.02193"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGADMEDLR"	"[R].lGADmEDLR.[N]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"632.82288"	"1264.63848"	"1264.64047"	"-1.58"	"-0.00100"	"9/70"	"9"	"70"	"442926.680419922"	"HCD"	"MS2"	"32.62423"	"25.8"	"100.000"	"63.5449"	"20818"	"20818"	"20795"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.0"	""	"42.2"	""	"31.4"	""	"34.1"	"0.2"	"48.1"	"56.3"	""	"553"	"22"	"34.000"	"27.000"	"0.191291263459086"	"18"	"0.004022"	"0.04328"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGADMEDLR"	"[R].lGADmEDLR.[N]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"632.82312"	"1264.63896"	"1264.64047"	"-1.19"	"-0.00075"	"8/70"	"8"	"70"	"2852405.25878906"	"HCD"	"MS2"	"25.81738"	"112.2"	"100.000"	"45.5972"	"13544"	"13544"	"13518"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"115.3"	""	"112.9"	""	"119.1"	""	"281.6"	""	"216.8"	"221.1"	""	"545"	"29"	"34.000"	"27.000"	"0.0353481351343128"	"25"	"0.0001301"	"0.004992"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGADMEDLR"	"[R].lGADmEDLR.[N]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"1"	"632.82330"	"1264.63933"	"1264.64047"	"-0.90"	"-0.00057"	"9/70"	"9"	"70"	"1751781.64160156"	"HCD"	"MS2"	"15.30376"	"72.3"	"100.000"	"45.8919"	"13664"	"13664"	"13642"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"76.1"	""	"84.5"	""	"89.8"	""	"153.7"	""	"145.5"	"142.1"	""	"568"	"20"	"34.000"	"27.000"	"0.296018149947698"	"24"	"0.00447"	"0.04843"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGADMEDLR"	"[R].lGADmEDLR.[N]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"632.82336"	"1264.63945"	"1264.64047"	"-0.80"	"-0.00051"	"7/70"	"7"	"70"	"456577.148010254"	"HCD"	"MS2"	"25.49575"	"30.9"	"100.000"	"61.2290"	"19865"	"19865"	"19841"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.5"	""	"44.9"	""	"42.3"	""	"47.2"	"0.7"	"54.5"	"60.1"	""	"566"	"16"	"34.000"	"27.000"	"0.739241663294975"	"20"	"0.005369"	"0.06103"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGADMEDLR"	"[R].lGADmEDLR.[N]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"632.82336"	"1264.63945"	"1264.64047"	"-0.80"	"-0.00051"	"6/70"	"6"	"70"	"292072.887207031"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"66.5655"	"22028"	"22028"	"22005"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.0"	""	"22.7"	""	"26.0"	""	"25.4"	""	"34.3"	"43.5"	""	"566"	"17"	"34.000"	"27.000"	"0.533072692325613"	"14"	"0.005119"	"0.0585"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGADMEDLR"	"[R].lGADmEDLR.[N]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"632.82343"	"1264.63957"	"1264.64047"	"-0.71"	"-0.00045"	"11/70"	"11"	"70"	"310197.466918945"	"HCD"	"MS2"	"14.67905"	"20.0"	"100.000"	"66.5249"	"22027"	"22027"	"21997"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.1"	""	"33.7"	""	"25.8"	""	"27.2"	""	"39.5"	"35.1"	""	"565"	"14"	"34.000"	"27.000"	"1.08897636040581"	"15"	"0.004867"	"0.05117"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGADMEDLR"	"[R].lGADmEDLR.[N]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"632.82349"	"1264.63970"	"1264.64047"	"-0.61"	"-0.00039"	"7/70"	"7"	"70"	"486872.457885742"	"HCD"	"MS2"	"40.37577"	"28.4"	"100.000"	"60.6653"	"19651"	"19651"	"19625"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.6"	""	"44.6"	""	"40.3"	""	"36.6"	""	"57.5"	"55.3"	""	"565"	"19"	"34.000"	"27.000"	"0.328109233409897"	"18"	"0.003449"	"0.03437"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGADMEDLR"	"[R].lGADmEDLR.[N]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"632.82361"	"1264.63994"	"1264.64047"	"-0.42"	"-0.00026"	"11/70"	"11"	"70"	"1286294.74890137"	"HCD"	"MS2"	"26.43453"	"59.4"	"100.000"	"46.0851"	"13731"	"13731"	"13709"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"72.6"	""	"60.0"	""	"71.7"	""	"116.0"	""	"115.8"	"133.1"	""	"565"	"15"	"34.000"	"27.000"	"0.94192961605614"	"19"	"0.003967"	"0.04151"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGADMEDLR"	"[R].lGADmEDLR.[N]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"632.82361"	"1264.63994"	"1264.64047"	"-0.42"	"-0.00026"	"8/70"	"8"	"70"	"3264494.76599121"	"HCD"	"MS2"	"19.51914"	"122.1"	"100.000"	"45.7745"	"13604"	"13604"	"13581"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"127.0"	""	"127.3"	""	"116.5"	""	"312.8"	""	"246.8"	"230.9"	""	"565"	"32"	"34.000"	"27.000"	"0.0162561782297747"	"25"	"0"	"0.003266"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGADMEDLR"	"[R].lGADmEDLR.[N]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"632.82367"	"1264.64006"	"1264.64047"	"-0.32"	"-0.00020"	"6/70"	"6"	"70"	"579479.739135742"	"HCD"	"MS2"	"52.22561"	"31.8"	"100.000"	"64.3559"	"21148"	"21148"	"21126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.2"	""	"45.5"	""	"48.8"	""	"48.1"	"0.2"	"53.6"	"64.8"	""	"567"	"7"	"34.000"	"27.000"	"5.70890824835987"	"17"	"0.008478"	"0.104"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGADMEDLR"	"[R].lGADmEDLR.[N]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"632.82379"	"1264.64031"	"1264.64047"	"-0.13"	"-0.00008"	"6/70"	"6"	"70"	"517241.53112793"	"HCD"	"MS2"	"30.16073"	"34.8"	"100.000"	"61.1514"	"19849"	"19849"	"19826"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.4"	""	"48.6"	""	"59.5"	""	"43.8"	""	"69.2"	"66.6"	""	"571"	"18"	"34.000"	"27.000"	"0.434116319738628"	"17"	"0.003653"	"0.03767"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGADMEDLR"	"[R].lGADmEDLR.[N]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"632.82404"	"1264.64079"	"1264.64047"	"0.26"	"0.00016"	"7/70"	"7"	"70"	"473583.464538574"	"HCD"	"MS2"	"20.4468"	"30.9"	"100.000"	"60.7342"	"19664"	"19664"	"19640"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.4"	""	"46.9"	""	"41.9"	""	"40.8"	""	"57.1"	"65.2"	""	"594"	"18"	"34.000"	"27.000"	"0.428308259402886"	"19"	"0.003653"	"0.03769"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGADMEDLR"	"[R].lGADmEDLR.[N]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"632.82434"	"1264.64141"	"1264.64047"	"0.74"	"0.00047"	"8/70"	"8"	"70"	"601666.183898926"	"HCD"	"MS2"	"59.94033"	"36.7"	"100.000"	"56.9091"	"18139"	"18139"	"18115"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.0"	""	"53.7"	""	"54.0"	""	"46.1"	""	"68.7"	"70.4"	""	"594"	"13"	"34.000"	"27.000"	"1.42480834245097"	"19"	"0.007808"	"0.0961"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGADMEDLR"	"[R].lGADmEDLR.[N]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"632.82440"	"1264.64153"	"1264.64047"	"0.84"	"0.00053"	"7/70"	"7"	"70"	"433167.319213867"	"HCD"	"MS2"	"33.31617"	"26.9"	"100.000"	"63.7076"	"20870"	"20870"	"20843"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.8"	""	"33.2"	""	"39.9"	""	"41.2"	"0.2"	"47.9"	"50.5"	""	"594"	"23"	"34.000"	"27.000"	"0.161717287894199"	"26"	"0.001374"	"0.01807"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLEQLDMR"	"[K].mLEQLDMR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"632.83148"	"1264.65569"	"1264.65909"	"-2.69"	"-0.00170"	"5/70"	"5"	"70"	"197633.043762207"	"HCD"	"MS2"	"44.1149"	"12.7"	"100.000"	"77.4137"	"26447"	"26447"	"26423"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.8"	""	"17.4"	""	"16.1"	""	"16.1"	""	"26.8"	"26.0"	""	"681"	"14"	"35.000"	"28.000"	"1.32165199619816"	"19"	"0.009594"	"0.1258"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSDLDSETR"	"[K].lSDLDSETR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"632.83325"	"1264.65923"	"1264.65823"	"0.79"	"0.00050"	"6/76"	"6"	"76"	"1703586.90783691"	"HCD"	"MS2"	"5.536637"	"92.4"	"100.000"	"50.6088"	"15575"	"15575"	"15550"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"136.6"	""	"93.9"	""	"123.2"	""	"158.7"	""	"181.1"	"183.0"	""	"674"	"50"	"35.000"	"28.000"	"0.000363605045391452"	"27"	"0"	"0.001273"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSDLDSETR"	"[K].lSDLDSETR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"632.83350"	"1264.65972"	"1264.65823"	"1.18"	"0.00074"	"7/76"	"7"	"76"	"1226993.33074951"	"HCD"	"MS2"	"9.380575"	"70.0"	"100.000"	"50.1959"	"15418"	"15418"	"15394"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.4"	""	"81.7"	""	"87.3"	""	"119.3"	"0.5"	"129.1"	"132.0"	""	"695"	"46"	"35.000"	"28.000"	"0.000901477328336287"	"25"	"0"	"0.0005099"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSSNTADITI"	"[R].nSSNTADITI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY41"	"Cell cycle control protein 50A OS=Rattus norvegicus OX=10116 GN=Tmem30a PE=1 SV=1"	"Q6AY41"	"Cell cycle control protein 50A OS=Rattus norvegicus OX=10116 GN=Tmem30a PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"632.83392"	"1264.66057"	"1264.65823"	"1.85"	"0.00117"	"7/92"	"7"	"92"	"1011830.76556396"	"HCD"	"MS2"	"6.35512"	"36.4"	"100.000"	"64.8356"	"21324"	"21324"	"21303"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.2"	""	"43.9"	""	"48.7"	""	"59.9"	""	"73.1"	"74.0"	""	"697"	"36"	"35.000"	"28.000"	"0.00865371887195507"	"18"	"0.0001301"	"0.004788"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLTTMGDR"	"[R].eLLTTMGDR.[F]"	"N-Term(TMT6plex)"	"1"	"3"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; Q64122; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light polypeptide 9 OS=Rattus norvegicus OX=10116 GN=Myl9 PE=1 SV=2; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"632.84143"	"1264.67558"	"1264.67685"	"-1.00"	"-0.00063"	"8/78"	"8"	"78"	"941875.016601563"	"HCD"	"MS2"	"22.62257"	"66.2"	"100.000"	"62.5997"	"20418"	"20418"	"20395"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.7"	""	"77.2"	""	"67.9"	""	"54.8"	""	"278.7"	"90.8"	""	"781"	"29"	"35.000"	"28.000"	"0.0517155369493517"	"23"	"0"	"0.00321"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLTTMGDR"	"[R].eLLTTMGDR.[F]"	"N-Term(TMT6plex)"	"1"	"3"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; Q64122; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light polypeptide 9 OS=Rattus norvegicus OX=10116 GN=Myl9 PE=1 SV=2; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"632.84174"	"1264.67620"	"1264.67685"	"-0.52"	"-0.00033"	"8/78"	"8"	"78"	"1260317.91558838"	"HCD"	"MS2"	"36.19545"	"84.2"	"100.000"	"62.2167"	"20279"	"20279"	"20263"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"104.5"	""	"111.7"	""	"96.0"	""	"89.1"	"1.1"	"259.8"	"140.8"	""	"780"	"38"	"35.000"	"28.000"	"0.00633964014742688"	"23"	"0"	"0.001055"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLTTMGDR"	"[R].eLLTTMGDR.[F]"	"N-Term(TMT6plex)"	"1"	"3"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; Q64122; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light polypeptide 9 OS=Rattus norvegicus OX=10116 GN=Myl9 PE=1 SV=2; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"632.84180"	"1264.67632"	"1264.67685"	"-0.42"	"-0.00027"	"6/78"	"6"	"78"	"1116503.98114014"	"HCD"	"MS2"	"31.83414"	"73.9"	"100.000"	"62.3037"	"20298"	"20298"	"20284"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"93.4"	""	"101.4"	""	"98.9"	""	"81.4"	"1.4"	"204.8"	"122.1"	""	"780"	"27"	"35.000"	"28.000"	"0.0816703857781848"	"22"	"0"	"0.003717"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLTTMGDR"	"[R].eLLTTMGDR.[F]"	"N-Term(TMT6plex)"	"1"	"3"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; Q64122; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light polypeptide 9 OS=Rattus norvegicus OX=10116 GN=Myl9 PE=1 SV=2; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"632.84198"	"1264.67668"	"1264.67685"	"-0.13"	"-0.00008"	"8/78"	"8"	"78"	"831112.057189941"	"HCD"	"MS2"	"29.82636"	"55.4"	"100.000"	"62.5313"	"20406"	"20406"	"20388"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.9"	""	"71.6"	""	"51.7"	""	"49.8"	""	"231.3"	"81.0"	""	"788"	"20"	"35.000"	"28.000"	"0.426084976811388"	"20"	"0.0004639"	"0.007559"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVNDAEK"	"[R].mVNDAEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"632.85187"	"1264.69646"	"1264.69714"	"-0.54"	"-0.00034"	"6/60"	"6"	"60"	"9514302.8918457"	"HCD"	"MS2"	"12.35776"	"660.6"	"86.235"	"38.4368"	"10624"	"10624"	"10606"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1082.2"	""	"893.5"	""	"919.0"	""	"815.7"	""	"1272.8"	"1284.4"	""	"868"	"29"	"36.000"	"29.000"	"0.0506395373804458"	"23"	"0.006505"	"0.07326"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVNDAEK"	"[R].mVNDAEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"632.85211"	"1264.69695"	"1264.69714"	"-0.16"	"-0.00010"	"6/60"	"6"	"60"	"9671929.86352539"	"HCD"	"MS2"	"11.41955"	"779.7"	"100.000"	"38.2061"	"10538"	"10538"	"10522"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1272.2"	""	"1068.6"	""	"1086.4"	""	"968.3"	""	"1503.8"	"1500.2"	""	"867"	"32"	"36.000"	"29.000"	"0.0261811730834661"	"25"	"0.005369"	"0.06128"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILIQYDR"	"[K].dILIQYDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"632.85773"	"1264.70818"	"1264.70987"	"-1.34"	"-0.00085"	"5/74"	"5"	"74"	"630932.431335449"	"HCD"	"MS2"	"22.91189"	"37.7"	"100.000"	"72.9952"	"24663"	"24663"	"24637"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.9"	""	"43.6"	""	"54.1"	""	"78.0"	""	"67.3"	"62.5"	""	"791"	"35"	"35.000"	"28.000"	"0.0131264257962057"	""	"0.0004639"	"0.007517"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILIQYDR"	"[K].dILIQYDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"632.85785"	"1264.70842"	"1264.70987"	"-1.14"	"-0.00072"	"5/74"	"5"	"74"	"1725075.0112915"	"HCD"	"MS2"	"9.516088"	"92.1"	"100.000"	"73.3182"	"24793"	"24793"	"24775"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"137.0"	""	"87.6"	""	"119.8"	""	"182.2"	"0.6"	"183.5"	"162.6"	""	"833"	"35"	"36.000"	"29.000"	"0.013110371728232"	""	"0.0001301"	"0.004934"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILIQYDR"	"[K].dILIQYDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"632.85803"	"1264.70879"	"1264.70987"	"-0.85"	"-0.00054"	"5/74"	"5"	"74"	"1023668.28765869"	"HCD"	"MS2"	"26.32628"	"54.2"	"100.000"	"73.1766"	"24723"	"24723"	"24700"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"79.3"	""	"62.0"	""	"77.4"	""	"88.9"	""	"111.6"	"98.1"	""	"829"	"35"	"36.000"	"29.000"	"0.0127504212971002"	""	"0"	"0.002302"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILIQYDR"	"[K].dILIQYDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"632.85815"	"1264.70903"	"1264.70987"	"-0.66"	"-0.00042"	"5/74"	"5"	"74"	"1387104.40722656"	"HCD"	"MS2"	"10.82339"	"70.3"	"100.000"	"73.4837"	"24847"	"24847"	"24827"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"92.2"	""	"80.5"	""	"87.1"	""	"131.2"	"1.2"	"136.5"	"138.5"	""	"829"	"35"	"36.000"	"29.000"	"0.0134748684766262"	""	"0"	"0.003801"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEGPLSVFGDR"	"[-].mEGPLSVFGDR.[S]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9773"	"0.0000"	"1"	"1"	"1"	"633.29480"	"1265.58232"	"1265.58306"	"-0.59"	"-0.00037"	"8/96"	"8"	"96"	"173822.935180664"	"HCD"	"MS2"	"4.26165"	"2.1"	"100.000"	"102.8763"	"35871"	"35871"	"35867"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.3"	""	"6.6"	""	"1.5"	""	"6.0"	""	"3.3"	""	"NoQuanLabels"	"242"	"88"	"30.000"	"23.000"	"1.93992692273495E-08"	"20"	"0"	"1E-05"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEGPLSVFGDR"	"[-].mEGPLSVFGDR.[S]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.29504"	"1265.58281"	"1265.58306"	"-0.20"	"-0.00013"	"9/96"	"9"	"96"	"175991.735351563"	"HCD"	"MS2"	"4.003231"	"2.6"	"100.000"	"102.8137"	"35921"	"35921"	"35916"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.8"	""	"2.9"	""	"3.1"	""	"4.5"	""	"6.6"	"4.0"	"NoQuanLabels"	"247"	"78"	"30.000"	"23.000"	"1.99832884648919E-07"	"17"	"0"	"2.702E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEGPLSVFGDR"	"[-].mEGPLSVFGDR.[S]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.29510"	"1265.58293"	"1265.58306"	"-0.10"	"-0.00007"	"9/96"	"9"	"96"	"184212.043884277"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"102.6176"	"35795"	"35795"	"35791"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.9"	""	""	""	"5.8"	""	"6.6"	""	"3.6"	"7.7"	"NoQuanLabels"	"250"	"77"	"30.000"	"23.000"	"2.58172519476316E-07"	"17"	"0"	"6.956E-05"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEGPLSVFGDR"	"[-].mEGPLSVFGDR.[S]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.29541"	"1265.58354"	"1265.58306"	"0.38"	"0.00024"	"9/96"	"9"	"96"	"158868.264343262"	"HCD"	"MS2"	"6.983327"	"2.9"	"100.000"	"102.5532"	"35841"	"35841"	"35837"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.4"	""	"5.7"	""	"3.5"	""	"5.7"	""	"5.2"	"3.7"	"NoQuanLabels"	"246"	"74"	"30.000"	"23.000"	"4.97628346787854E-07"	"17"	"0"	"3.118E-05"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEGPLSVFGDR"	"[-].mEGPLSVFGDR.[S]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.29608"	"1265.58489"	"1265.58306"	"1.44"	"0.00091"	"4/96"	"4"	"96"	"101217.059631348"	"HCD"	"MS2"	"40.00161"	"3.2"	"100.000"	"107.7715"	"37574"	"37574"	"37560"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.4"	""	"2.5"	""	"5.1"	""	"5.6"	""	"6.6"	"7.9"	"NoQuanLabels"	"255"	"11"	"31.000"	"24.000"	"0.99199660257575"	"13"	"0.00344"	"0.0324"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYVEELNR"	"[K].nYVEELNR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVJ0"	"Protein RUFY3 OS=Rattus norvegicus OX=10116 GN=Rufy3 PE=1 SV=1"	"Q5FVJ0"	"Protein RUFY3 OS=Rattus norvegicus OX=10116 GN=Rufy3 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"633.33826"	"1265.66924"	"1265.66873"	"0.40"	"0.00025"	"6/72"	"6"	"72"	"1625020.20715332"	"HCD"	"MS2"	"36.89333"	"98.9"	"100.000"	"49.9940"	"15324"	"15324"	"15294"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"148.8"	""	"111.5"	""	"126.7"	""	"162.3"	""	"199.6"	"189.7"	""	"751"	"26"	"35.000"	"28.000"	"0.101767695777501"	"16"	"0.0003538"	"0.006931"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYVEELNR"	"[K].nYVEELNR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVJ0"	"Protein RUFY3 OS=Rattus norvegicus OX=10116 GN=Rufy3 PE=1 SV=1"	"Q5FVJ0"	"Protein RUFY3 OS=Rattus norvegicus OX=10116 GN=Rufy3 PE=1 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"633.33838"	"1265.66948"	"1265.66873"	"0.59"	"0.00037"	"6/72"	"6"	"72"	"1977071.7980957"	"HCD"	"MS2"	"23.46929"	"115.2"	"100.000"	"49.6616"	"15200"	"15200"	"15174"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"161.2"	""	"124.4"	""	"146.8"	""	"198.1"	""	"234.6"	"228.0"	""	"754"	"29"	"35.000"	"28.000"	"0.047134765439208"	"18"	"0.000936"	"0.01152"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIEYEVVR"	"[K].eIEYEVVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P07756"	"Carbamoyl-phosphate synthase [ammonia], mitochondrial OS=Rattus norvegicus OX=10116 GN=Cps1 PE=1 SV=1"	"P07756"	"Carbamoyl-phosphate synthase [ammonia], mitochondrial OS=Rattus norvegicus OX=10116 GN=Cps1 PE=1 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"633.35034"	"1265.69341"	"1265.69388"	"-0.38"	"-0.00024"	"6/64"	"6"	"64"	"816890.109375"	"HCD"	"MS2"	"39.28313"	"50.2"	"100.000"	"59.3114"	"19133"	"19133"	"19110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.8"	""	"58.4"	""	"69.8"	""	"69.5"	"0.5"	"127.5"	"92.1"	""	"849"	"39"	"36.000"	"29.000"	"0.00490769646810546"	"25"	"0.0002479"	"0.005305"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEMTLK"	"[K].eGEMTLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"633.36206"	"1265.71684"	"1265.71754"	"-0.55"	"-0.00035"	"6/56"	"6"	"56"	"3196324.43096924"	"HCD"	"MS2"	"0"	"271.6"	"100.000"	"50.9621"	"15729"	"15729"	"15712"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"418.3"	""	"332.3"	""	"368.8"	""	"420.6"	""	"525.4"	"513.1"	""	"783"	"28"	"35.000"	"28.000"	"0.0666395056036622"	"19"	"0.005183"	"0.05906"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEMTLK"	"[K].eGEMTLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"633.36261"	"1265.71794"	"1265.71754"	"0.31"	"0.00020"	"6/56"	"6"	"56"	"2597158.52954102"	"HCD"	"MS2"	"10.07738"	"208.8"	"100.000"	"51.2693"	"15843"	"15843"	"15826"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"320.2"	""	"247.0"	""	"274.0"	""	"320.5"	""	"415.9"	"406.4"	""	"778"	"29"	"35.000"	"28.000"	"0.0472008262830876"	"20"	"0.00447"	"0.04669"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NADNDWFR"	"[K].nADNDWFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6BBI8"	"Ubiquitin-fold modifier-conjugating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ufc1 PE=2 SV=1"	"Q6BBI8"	"Ubiquitin-fold modifier-conjugating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ufc1 PE=2 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"633.80560"	"1266.60393"	"1266.60647"	"-2.00"	"-0.00127"	"6/74"	"6"	"74"	"1327071.9642334"	"HCD"	"MS2"	"0"	"83.0"	"100.000"	"59.8930"	"19349"	"19349"	"19338"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"112.6"	""	"83.0"	""	"95.2"	""	"157.4"	""	"168.4"	"177.5"	""	"409"	"30"	"33.000"	"26.000"	"0.0189973626096497"	"23"	"0.0002479"	"0.005631"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NADNDWFR"	"[K].nADNDWFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6BBI8"	"Ubiquitin-fold modifier-conjugating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ufc1 PE=2 SV=1"	"Q6BBI8"	"Ubiquitin-fold modifier-conjugating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ufc1 PE=2 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"633.80646"	"1266.60564"	"1266.60647"	"-0.65"	"-0.00041"	"5/74"	"5"	"74"	"1401250.21917725"	"HCD"	"MS2"	"0"	"85.1"	"100.000"	"60.1715"	"19446"	"19446"	"19438"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"112.4"	""	"87.7"	""	"93.2"	""	"161.6"	""	"174.4"	"179.9"	""	"420"	"30"	"33.000"	"26.000"	"0.0204747823920651"	"22"	"0.0002479"	"0.005711"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADDTFEALR"	"[R].aDDTFEALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"633.82886"	"1266.65044"	"1266.65275"	"-1.82"	"-0.00115"	"11/72"	"11"	"72"	"3283204.61785889"	"HCD"	"MS2"	"8.649332"	"150.1"	"100.000"	"61.8410"	"20115"	"20115"	"20097"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"247.8"	""	"153.1"	""	"196.6"	""	"221.4"	""	"294.5"	"310.6"	""	"644"	"44"	"35.000"	"28.000"	"0.00142513455900766"	"24"	"0"	"0.0008108"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADDTFEALR"	"[R].aDDTFEALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"633.82928"	"1266.65129"	"1266.65275"	"-1.15"	"-0.00073"	"11/72"	"11"	"72"	"2819028.78112793"	"HCD"	"MS2"	"0"	"137.5"	"100.000"	"61.7265"	"20084"	"20084"	"20065"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"201.1"	""	"147.5"	""	"176.0"	""	"218.8"	""	"268.1"	"293.7"	""	"641"	"43"	"35.000"	"28.000"	"0.00145153674359111"	"24"	"0"	"0.000459"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVIDDSFAR"	"[R].dVIDDSFAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P50282"	"Matrix metalloproteinase-9 OS=Rattus norvegicus OX=10116 GN=Mmp9 PE=2 SV=1"	"P50282"	"Matrix metalloproteinase-9 OS=Rattus norvegicus OX=10116 GN=Mmp9 PE=2 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"633.82971"	"1266.65215"	"1266.65275"	"-0.47"	"-0.00030"	"6/74"	"6"	"74"	"554596.686828613"	"HCD"	"MS2"	"0"	"34.1"	"100.000"	"64.4251"	"21176"	"21176"	"21151"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.3"	""	"38.9"	""	"31.5"	""	"64.6"	""	"57.9"	"78.5"	""	"639"	"33"	"35.000"	"28.000"	"0.0163859212185241"	"18"	"0"	"0.0008003"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADDTFEALR"	"[R].aDDTFEALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"633.83014"	"1266.65300"	"1266.65275"	"0.20"	"0.00013"	"12/72"	"12"	"72"	"1304959.44897461"	"HCD"	"MS2"	"20.3325"	"73.7"	"100.000"	"61.5353"	"19990"	"19990"	"19969"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"107.2"	""	"89.7"	""	"96.4"	""	"120.2"	""	"143.2"	"147.9"	""	"662"	"33"	"35.000"	"28.000"	"0.016897715499186"	"20"	"0"	"0.0006368"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVIDDSFAR"	"[R].dVIDDSFAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P50282"	"Matrix metalloproteinase-9 OS=Rattus norvegicus OX=10116 GN=Mmp9 PE=2 SV=1"	"P50282"	"Matrix metalloproteinase-9 OS=Rattus norvegicus OX=10116 GN=Mmp9 PE=2 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"633.83020"	"1266.65312"	"1266.65275"	"0.30"	"0.00019"	"7/74"	"7"	"74"	"766508.30090332"	"HCD"	"MS2"	"0"	"42.8"	"100.000"	"64.5925"	"21230"	"21230"	"21207"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.3"	""	"46.8"	""	"45.0"	""	"92.8"	""	"74.7"	"90.8"	""	"662"	"36"	"35.000"	"28.000"	"0.00751325265973546"	"18"	"0"	"0.0004796"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADDTFEALR"	"[R].aDDTFEALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"633.83032"	"1266.65337"	"1266.65275"	"0.49"	"0.00031"	"12/72"	"12"	"72"	"1645549.61584473"	"HCD"	"MS2"	"13.38022"	"88.1"	"100.000"	"61.4139"	"19956"	"19956"	"19937"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"138.2"	""	"98.2"	""	"105.4"	""	"145.8"	""	"169.1"	"181.1"	""	"665"	"33"	"35.000"	"28.000"	"0.0161730395892411"	"20"	"0"	"0.0005613"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLAESYER"	"[K].aVLAESYER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"633.84778"	"1266.68828"	"1266.68913"	"-0.67"	"-0.00043"	"7/70"	"7"	"70"	"4134018.05322266"	"HCD"	"MS2"	"0"	"181.5"	"100.000"	"49.0743"	"14961"	"14961"	"14944"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"303.6"	""	"269.9"	""	"274.7"	""	"256.0"	""	"295.8"	"320.0"	""	"714"	"38"	"35.000"	"28.000"	"0.00572358604476345"	"20"	"0"	"0.0007944"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSADEALR"	"[K].yLSADEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P07896"	"Peroxisomal bifunctional enzyme OS=Rattus norvegicus OX=10116 GN=Ehhadh PE=1 SV=2"	"P07896"	"Peroxisomal bifunctional enzyme OS=Rattus norvegicus OX=10116 GN=Ehhadh PE=1 SV=2"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"633.84802"	"1266.68877"	"1266.68913"	"-0.29"	"-0.00018"	"6/70"	"6"	"70"	"634958.210632324"	"HCD"	"MS2"	"26.05991"	"41.9"	"100.000"	"60.8544"	"19728"	"19728"	"19705"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.2"	""	"59.0"	""	"57.8"	""	"70.9"	""	"73.8"	"79.9"	""	"716"	"16"	"35.000"	"28.000"	"0.990565109057322"	"22"	"0.0004639"	"0.00797"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSADEALR"	"[K].yLSADEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P07896"	"Peroxisomal bifunctional enzyme OS=Rattus norvegicus OX=10116 GN=Ehhadh PE=1 SV=2"	"P07896"	"Peroxisomal bifunctional enzyme OS=Rattus norvegicus OX=10116 GN=Ehhadh PE=1 SV=2"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"633.84814"	"1266.68901"	"1266.68913"	"-0.09"	"-0.00006"	"7/70"	"7"	"70"	"652255.001281738"	"HCD"	"MS2"	"26.82255"	"43.1"	"100.000"	"61.1184"	"19820"	"19820"	"19798"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.9"	""	"62.6"	""	"57.1"	""	"64.2"	""	"79.8"	"82.3"	""	"724"	"31"	"35.000"	"28.000"	"0.031820615109278"	"22"	"0"	"0.001028"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLAESYER"	"[K].aVLAESYER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"633.84827"	"1266.68926"	"1266.68913"	"0.10"	"0.00006"	"8/70"	"8"	"70"	"976577.991577148"	"HCD"	"MS2"	"15.29039"	"60.0"	"100.000"	"49.1400"	"14975"	"14975"	"14950"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.1"	""	"78.6"	""	"79.4"	""	"101.4"	"1.6"	"110.3"	"114.4"	""	"721"	"30"	"35.000"	"28.000"	"0.0396191605115424"	"16"	"0"	"0.000944"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLAESYER"	"[K].aVLAESYER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"633.84845"	"1266.68962"	"1266.68913"	"0.39"	"0.00025"	"8/70"	"8"	"70"	"4174923.42901611"	"HCD"	"MS2"	"0"	"187.8"	"100.000"	"49.4206"	"15090"	"15090"	"15073"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"296.3"	""	"268.6"	""	"293.8"	""	"268.6"	""	"314.4"	"337.1"	""	"697"	"47"	"35.000"	"28.000"	"0.000760681374277286"	"20"	"0"	"0.0004802"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLAESYER"	"[K].aVLAESYER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"633.84851"	"1266.68974"	"1266.68913"	"0.48"	"0.00031"	"8/70"	"8"	"70"	"1290414.21514893"	"HCD"	"MS2"	"7.86596"	"76.1"	"100.000"	"48.7913"	"14846"	"14846"	"14815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"124.8"	""	"97.0"	""	"98.5"	""	"116.1"	""	"139.6"	"145.5"	""	"697"	"30"	"35.000"	"28.000"	"0.0331285770589214"	"21"	"0"	"0.003383"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTADETSK"	"[K].gTADETSk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"633.84900"	"1266.69072"	"1266.69417"	"-2.72"	"-0.00172"	"12/66"	"12"	"66"	"426809.66796875"	"HCD"	"MS2"	"0"	"38.2"	"100.000"	"24.0375"	"4812"	"4812"	"4783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.8"	""	"40.3"	""	"45.6"	""	"61.7"	""	"80.6"	"85.0"	""	"694"	"28"	"35.000"	"28.000"	"0.0516808293965688"	"22"	"0.000936"	"0.01186"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTADETSK"	"[K].gTADETSk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"633.85040"	"1266.69353"	"1266.69417"	"-0.50"	"-0.00032"	"7/66"	"7"	"66"	"3298593.47229004"	"HCD"	"MS2"	"0"	"278.1"	"100.000"	"23.7278"	"4686"	"4686"	"4664"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"393.6"	""	"251.9"	""	"261.8"	""	"533.9"	""	"610.6"	"597.1"	""	"688"	"44"	"35.000"	"28.000"	"0.00126345111371341"	"22"	"0"	"0.003717"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTADETSK"	"[K].gTADETSk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"633.85059"	"1266.69390"	"1266.69417"	"-0.21"	"-0.00014"	"7/66"	"7"	"66"	"5138839.83624268"	"HCD"	"MS2"	"0"	"404.4"	"100.000"	"23.8771"	"4729"	"4729"	"4711"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"560.9"	""	"380.3"	""	"394.7"	""	"731.8"	""	"873.2"	"911.9"	""	"700"	"46"	"35.000"	"28.000"	"0.000829980796981579"	"23"	"0"	"0.003773"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTYGGAAAAVR"	"[K].tTYGGAAAAVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P49791"	"Nuclear pore complex protein Nup153 OS=Rattus norvegicus OX=10116 GN=Nup153 PE=1 SV=1"	"P49791"	"Nuclear pore complex protein Nup153 OS=Rattus norvegicus OX=10116 GN=Nup153 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.85376"	"1266.70024"	"1266.70037"	"-0.10"	"-0.00006"	"12/82"	"12"	"82"	"360446.770751953"	"HCD"	"MS2"	"0"	"29.6"	"100.000"	"34.8436"	"9171"	"9171"	"9147"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.1"	""	"30.4"	""	"34.5"	""	"54.0"	"0.9"	"57.4"	"62.3"	""	"725"	"18"	"35.000"	"28.000"	"0.556298656264744"	"14"	"0.003507"	"0.03598"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTYGGAAAAVR"	"[K].tTYGGAAAAVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P49791"	"Nuclear pore complex protein Nup153 OS=Rattus norvegicus OX=10116 GN=Nup153 PE=1 SV=1"	"P49791"	"Nuclear pore complex protein Nup153 OS=Rattus norvegicus OX=10116 GN=Nup153 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"633.85468"	"1266.70207"	"1266.70037"	"1.35"	"0.00085"	"14/82"	"14"	"82"	"471559.37097168"	"HCD"	"MS2"	"41.57745"	"32.9"	"100.000"	"34.6490"	"9098"	"9098"	"9073"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.2"	""	"33.4"	""	"41.4"	""	"63.1"	"0.0"	"68.1"	"67.9"	""	"713"	"26"	"35.000"	"28.000"	"0.0952926784688471"	"22"	"0"	"0.003505"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHIEELLR"	"[R].eHIEELLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"423.24463"	"1267.71933"	"1267.72077"	"-1.13"	"-0.00048"	"6/64"	"6"	"64"	"2403115.75231934"	"HCD"	"MS2"	"11.3069"	"62.2"	"100.000"	"55.2716"	"17485"	"17485"	"17463"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"73.1"	""	"58.4"	""	"67.0"	""	"84.1"	""	"86.8"	"226.7"	""	"579"	"29"	"34.000"	"27.000"	"0.0339350558326184"	"21"	"0.0002479"	"0.005136"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHIEELLR"	"[R].eHIEELLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"423.24472"	"1267.71961"	"1267.72077"	"-0.91"	"-0.00039"	"9/64"	"9"	"64"	"2535540.9786377"	"HCD"	"MS2"	"15.78541"	"58.3"	"100.000"	"55.4879"	"17559"	"17559"	"17543"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"64.1"	""	"58.1"	""	"65.0"	""	"76.7"	""	"82.8"	"210.5"	""	"579"	"22"	"34.000"	"27.000"	"0.198448841558045"	"20"	"0.0001301"	"0.004407"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGQQIVGPPR"	"[R].sGQQIVGPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"634.36871"	"1267.73015"	"1267.73200"	"-1.46"	"-0.00093"	"9/86"	"9"	"86"	"1435939.78436279"	"HCD"	"MS2"	"8.021847"	"75.2"	"100.000"	"35.1408"	"9297"	"9297"	"9274"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"76.8"	""	"79.4"	""	"100.2"	""	"178.1"	""	"144.8"	"139.0"	""	"509"	"36"	"34.000"	"27.000"	"0.00602126563010126"	"16"	"0"	"0.0004832"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGQQIVGPPR"	"[R].sGQQIVGPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"634.36938"	"1267.73149"	"1267.73200"	"-0.40"	"-0.00025"	"8/86"	"8"	"86"	"1302356.31158447"	"HCD"	"MS2"	"17.36883"	"68.1"	"100.000"	"35.2251"	"9326"	"9326"	"9301"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"71.7"	""	"71.7"	""	"82.8"	""	"146.8"	""	"141.6"	"132.7"	""	"510"	"37"	"34.000"	"27.000"	"0.00507621701441733"	"16"	"0"	"0.0003552"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGQQIVGPPR"	"[R].sGQQIVGPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"634.37012"	"1267.73296"	"1267.73200"	"0.76"	"0.00048"	"6/86"	"6"	"86"	"692595.597351074"	"HCD"	"MS2"	"0"	"46.3"	"100.000"	"35.4396"	"9419"	"9419"	"9395"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.5"	""	"58.8"	""	"54.1"	""	"85.4"	""	"97.7"	"94.0"	""	"530"	"20"	"34.000"	"27.000"	"0.238366859105459"	"14"	"0.001546"	"0.01894"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGQQIVGPPR"	"[R].sGQQIVGPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"634.37061"	"1267.73393"	"1267.73200"	"1.53"	"0.00097"	"4/86"	"4"	"86"	"499425.033813477"	"HCD"	"MS2"	"0"	"33.2"	"100.000"	"35.6434"	"9497"	"9497"	"9471"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.1"	""	"38.3"	""	"43.9"	""	"65.0"	""	"66.7"	"69.8"	""	"513"	"7"	"34.000"	"27.000"	"5.15332306434139"	"16"	"0.008777"	"0.1134"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPELADK"	"[K].hPELADk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"423.25153"	"1267.74002"	"1267.74106"	"-0.81"	"-0.00034"	"6/54"	"6"	"54"	"24915144.1346436"	"HCD"	"MS2"	"26.45894"	"440.1"	"40.311"	"30.0355"	"7232"	"7232"	"7216"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"613.6"	""	"610.9"	""	"637.1"	""	"732.7"	""	"830.3"	"746.3"	""	"472"	"35"	"33.000"	"26.000"	"0.00707802354481086"	"21"	"0.001211"	"0.0148"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPELADK"	"[K].hPELADk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"0"	"3"	"3"	"0.8649"	"0.0000"	"1"	"1"	"1"	"423.25159"	"1267.74021"	"1267.74106"	"-0.67"	"-0.00028"	"6/54"	"6"	"54"	"23829534.8369141"	"HCD"	"MS2"	"24.27365"	"431.7"	"38.996"	"30.0819"	"7238"	"7238"	"7224"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"605.4"	""	"574.4"	""	"606.4"	""	"737.1"	""	"799.2"	"772.3"	""	"472"	"37"	"33.000"	"26.000"	"0.00470881906332655"	"20"	"0.001211"	"0.01558"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIPPDQQR"	"[K].eGIPPDQQR.[L]"	"N-Term(TMT6plex)"	"1"	"4"	"P62982"	"Ubiquitin-40S ribosomal protein S27a OS=Rattus norvegicus OX=10116 GN=Rps27a PE=1 SV=2"	"P62986; P62982; P0CG51; Q63429"	"Ubiquitin-60S ribosomal protein L40 OS=Rattus norvegicus OX=10116 GN=Uba52 PE=1 SV=2; Ubiquitin-40S ribosomal protein S27a OS=Rattus norvegicus OX=10116 GN=Rps27a PE=1 SV=2; Polyubiquitin-B OS=Rattus norvegicus OX=10116 GN=Ubb PE=1 SV=1; Polyubiquitin-C OS=Rattus norvegicus OX=10116 GN=Ubc PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"634.84332"	"1268.67937"	"1268.67963"	"-0.21"	"-0.00013"	"6/78"	"6"	"78"	"377709.065551758"	"HCD"	"MS2"	"0"	"30.0"	"100.000"	"29.3996"	"6962"	"6962"	"6934"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.2"	""	"32.2"	""	"37.3"	""	"57.3"	""	"56.1"	"60.9"	""	"655"	"17"	"35.000"	"28.000"	"0.733181172881131"	"14"	"0.007087"	"0.08207"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQDTDGK"	"[K].fQDTDGk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"634.84760"	"1268.68791"	"1268.68869"	"-0.61"	"-0.00039"	"6/62"	"6"	"62"	"3203751.72991943"	"HCD"	"MS2"	"0"	"278.3"	"100.000"	"41.7320"	"11974"	"11974"	"11953"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"376.5"	""	"235.4"	""	"294.8"	""	"537.5"	""	"602.5"	"602.0"	""	"671"	"23"	"35.000"	"28.000"	"0.152297412386143"	"18"	"0.007627"	"0.09131"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQDTDGK"	"[K].fQDTDGk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"634.84772"	"1268.68816"	"1268.68869"	"-0.42"	"-0.00026"	"10/62"	"10"	"62"	"3868181.69610596"	"HCD"	"MS2"	"2.518205"	"326.9"	"100.000"	"41.9094"	"12036"	"12036"	"12017"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"452.2"	""	"281.3"	""	"337.7"	""	"599.0"	""	"716.7"	"727.0"	""	"674"	"22"	"35.000"	"28.000"	"0.192588300558419"	"17"	"0.008437"	"0.1022"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WSEQTPHR"	"[R].wSEQTPHR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"423.88901"	"1269.65247"	"1269.65375"	"-1.01"	"-0.00043"	"9/70"	"9"	"70"	"11032996.7225952"	"HCD"	"MS2"	"8.489217"	"169.5"	"70.204"	"28.0035"	"6407"	"6407"	"6397"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"238.3"	""	"208.1"	""	"196.5"	""	"294.5"	"10.6"	"330.3"	"329.4"	""	"619"	"32"	"34.000"	"27.000"	"0.0207329286614415"	"18"	"0.0003538"	"0.006267"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WSEQTPHR"	"[R].wSEQTPHR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"423.88907"	"1269.65265"	"1269.65375"	"-0.86"	"-0.00037"	"8/70"	"8"	"70"	"11586458.2346191"	"HCD"	"MS2"	"8.619968"	"153.0"	"57.639"	"28.0636"	"6418"	"6418"	"6405"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"211.1"	""	"194.6"	""	"173.5"	""	"273.4"	"7.6"	"302.8"	"288.7"	""	"619"	"28"	"34.000"	"27.000"	"0.0463084935561227"	"20"	"0.000936"	"0.01182"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDSHDLQR"	"[K].lGDSHDLQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"635.34106"	"1269.67485"	"1269.67488"	"-0.02"	"-0.00001"	"7/72"	"7"	"72"	"585801.70135498"	"HCD"	"MS2"	"0"	"43.0"	"100.000"	"29.2338"	"6907"	"6907"	"6880"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.8"	""	"45.3"	""	"49.7"	""	"74.9"	"1.4"	"87.8"	"93.0"	""	"665"	"21"	"35.000"	"28.000"	"0.240320959697722"	"24"	"0.001812"	"0.02038"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGYQGDK"	"[R].gSGYQGDk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.9556"	"0.0000"	"1"	"1"	"1"	"635.34369"	"1269.68010"	"1269.68394"	"-3.02"	"-0.00192"	"7/72"	"7"	"72"	"2826106.73687744"	"HCD"	"MS2"	"0"	"244.4"	"100.000"	"26.4479"	"5760"	"5760"	"5735"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"246.9"	""	"219.1"	""	"190.9"	""	"496.1"	""	"579.2"	"602.1"	""	"653"	"45"	"35.000"	"28.000"	"0.000943806981592327"	"17"	"0.0001301"	"0.004455"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGYQGDK"	"[R].gSGYQGDk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"635.34521"	"1269.68315"	"1269.68394"	"-0.62"	"-0.00039"	"7/72"	"7"	"72"	"7071540.55407715"	"HCD"	"MS2"	"0"	"537.9"	"100.000"	"26.4361"	"5771"	"5771"	"5754"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"486.5"	""	"471.7"	""	"403.7"	""	"1069.5"	""	"1354.0"	"1351.6"	""	"668"	"33"	"35.000"	"28.000"	"0.0173279213002273"	"22"	"0.0007829"	"0.009468"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGYQGDK"	"[R].gSGYQGDk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"635.34576"	"1269.68425"	"1269.68394"	"0.25"	"0.00016"	"7/72"	"7"	"72"	"2282497.77587891"	"HCD"	"MS2"	"15.69905"	"161.2"	"100.000"	"26.7694"	"5891"	"5891"	"5868"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"228.7"	""	"201.6"	""	"166.1"	""	"292.2"	"2.0"	"337.7"	"301.3"	""	"675"	"11"	"35.000"	"28.000"	"2.98726518317907"	"16"	"0.002973"	"0.02907"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDEASK"	"[K].yVDEASk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"635.35626"	"1269.70525"	"1269.70909"	"-3.02"	"-0.00192"	"10/54"	"10"	"54"	"2763802.00268555"	"HCD"	"MS2"	"0"	"224.7"	"100.000"	"39.5490"	"11086"	"11086"	"11064"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"295.7"	""	"260.8"	""	"287.3"	""	"409.3"	""	"469.1"	"414.0"	""	"568"	"25"	"34.000"	"27.000"	"0.0820953086591795"	"24"	"0.006443"	"0.07248"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDEASK"	"[K].yVDEASk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"635.35736"	"1269.70745"	"1269.70909"	"-1.29"	"-0.00082"	"10/54"	"10"	"54"	"2796639.89178467"	"HCD"	"MS2"	"0"	"229.4"	"100.000"	"39.7521"	"11160"	"11160"	"11133"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"294.8"	""	"253.1"	""	"279.7"	""	"424.4"	""	"501.1"	"429.1"	""	"577"	"25"	"34.000"	"27.000"	"0.0859301989890321"	"24"	"0.004942"	"0.05325"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDEASK"	"[K].yVDEASk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"635.35767"	"1269.70806"	"1269.70909"	"-0.81"	"-0.00052"	"6/54"	"6"	"54"	"2034575.31958008"	"HCD"	"MS2"	"0"	"183.3"	"100.000"	"39.8481"	"11208"	"11208"	"11188"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"231.9"	""	"199.4"	""	"226.5"	""	"333.0"	""	"401.7"	"350.4"	""	"550"	"31"	"34.000"	"27.000"	"0.0203860316357752"	"22"	"0.003449"	"0.03378"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQNAPSLPSR"	"[R].aQNAPSLPSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"635.35889"	"1269.71050"	"1269.71126"	"-0.60"	"-0.00038"	"7/94"	"7"	"94"	"1168198.65527344"	"HCD"	"MS2"	"17.39034"	"56.3"	"100.000"	"36.7025"	"9931"	"9931"	"9907"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.5"	""	"67.5"	""	"59.7"	""	"101.9"	""	"117.0"	"123.1"	""	"529"	"24"	"34.000"	"27.000"	"0.11153872515686"	"20"	"0"	"0.0009936"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQNAPSLPSR"	"[R].aQNAPSLPSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"635.35895"	"1269.71062"	"1269.71126"	"-0.51"	"-0.00032"	"6/94"	"6"	"94"	"1905660.01757813"	"HCD"	"MS2"	"21.27082"	"82.2"	"100.000"	"36.5356"	"9857"	"9857"	"9832"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.2"	""	"84.3"	""	"95.0"	""	"159.1"	""	"187.8"	"173.9"	""	"529"	"34"	"34.000"	"27.000"	"0.00978195535518803"	"18"	"0"	"0.0005341"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQNAPSLPSR"	"[R].aQNAPSLPSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"635.35907"	"1269.71086"	"1269.71126"	"-0.32"	"-0.00020"	"7/94"	"7"	"94"	"2553338.99261475"	"HCD"	"MS2"	"17.09152"	"103.7"	"100.000"	"36.3852"	"9802"	"9802"	"9783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"94.3"	""	"111.7"	""	"106.9"	""	"190.4"	""	"234.2"	"250.0"	""	"529"	"40"	"34.000"	"27.000"	"0.00242340319637269"	"20"	"0"	"0.000407"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQNAPSLPSR"	"[R].aQNAPSLPSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"635.35931"	"1269.71135"	"1269.71126"	"0.07"	"0.00004"	"7/94"	"7"	"94"	"1617817.39801025"	"HCD"	"MS2"	"0"	"78.0"	"100.000"	"36.8390"	"9981"	"9981"	"9956"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"84.2"	""	"83.2"	""	"93.8"	""	"127.4"	"0.1"	"171.8"	"181.3"	""	"563"	"40"	"34.000"	"27.000"	"0.00284104687430586"	"20"	"0"	"0.0002979"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGAIIVDPAR"	"[K].eGAIIVDPAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"635.36090"	"1269.71453"	"1269.73642"	"-17.24"	"-0.01095"	"5/84"	"5"	"84"	"408072.604553223"	"HCD"	"MS2"	"25.65495"	"23.9"	"100.000"	"56.9205"	"18144"	"18144"	"18115"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.8"	""	"32.2"	""	"37.3"	""	"33.6"	""	"44.7"	"42.3"	""	"535"	"12"	"34.000"	"27.000"	"1.78781997949604"	"13"	"0.004606"	"0.0495"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGAIIVDPAR"	"[K].eGAIIVDPAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"635.37219"	"1269.73711"	"1269.73642"	"0.54"	"0.00035"	"5/84"	"5"	"84"	"1192933.39233398"	"HCD"	"MS2"	"17.31493"	"50.7"	"100.000"	"56.3749"	"17935"	"17935"	"17910"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.2"	""	"72.1"	""	"81.2"	""	"65.8"	"0.7"	"78.7"	"89.9"	""	"424"	"36"	"33.000"	"26.000"	"0.00496976508847824"	""	"0"	"0.0005885"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGAIIVDPAR"	"[K].eGAIIVDPAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"635.37225"	"1269.73723"	"1269.73642"	"0.64"	"0.00041"	"7/84"	"7"	"84"	"431526.832397461"	"HCD"	"MS2"	"46.86852"	"24.4"	"100.000"	"56.6996"	"18068"	"18068"	"18038"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.3"	""	"32.2"	""	"32.0"	""	"36.6"	""	"40.5"	"45.8"	""	"424"	"16"	"33.000"	"26.000"	"0.544923905946999"	"13"	"0.0003538"	"0.006708"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGAIIVDPAR"	"[K].eGAIIVDPAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"635.37305"	"1269.73882"	"1269.73642"	"1.89"	"0.00120"	"5/84"	"5"	"84"	"1247567.93151855"	"HCD"	"MS2"	"33.76649"	"54.6"	"100.000"	"56.5314"	"17985"	"17985"	"17957"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.3"	""	"82.6"	""	"85.2"	""	"65.8"	""	"94.1"	"104.1"	""	"450"	"36"	"33.000"	"26.000"	"0.00552309506029131"	""	"0"	"0.0001955"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDEHLAK"	"[K].vDEHLAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.6087"	"0.0000"	"1"	"1"	"1"	"423.92343"	"1269.75574"	"1269.75671"	"-0.76"	"-0.00032"	"5/50"	"5"	"50"	"12635570.017395"	"HCD"	"MS2"	"37.77396"	"442.7"	"71.116"	"37.5748"	"10282"	"10282"	"10276"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"448.8"	""	"455.4"	""	"509.2"	""	"770.5"	""	"1025.3"	"1011.6"	""	"405"	"23"	"33.000"	"26.000"	"0.0944985245136434"	"23"	"0.004606"	"0.04966"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDEHLAK"	"[K].vDEHLAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"423.92395"	"1269.75730"	"1269.75671"	"0.46"	"0.00020"	"6/50"	"6"	"50"	"11626805.3709717"	"HCD"	"MS2"	"30.48274"	"527.7"	"100.000"	"37.7688"	"10355"	"10355"	"10348"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"544.6"	""	"554.9"	""	"608.5"	""	"893.6"	""	"1222.4"	"1204.3"	""	"398"	"27"	"32.000"	"25.000"	"0.0358800530431054"	"24"	"0.001978"	"0.02212"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINTPEVVR"	"[K].iINTPEVVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"635.38898"	"1269.77068"	"1269.77280"	"-1.67"	"-0.00106"	"6/80"	"6"	"80"	"604603.992492676"	"HCD"	"MS2"	"19.54601"	"35.4"	"100.000"	"66.3913"	"21972"	"21972"	"21949"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.8"	""	"42.8"	""	"49.7"	""	"64.0"	"0.8"	"60.7"	"60.9"	""	"373"	"35"	"32.000"	"25.000"	"0.00571056180383312"	"21"	"0.000936"	"0.01191"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVNTPEVIR"	"[K].iVNTPEVIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"635.38971"	"1269.77214"	"1269.77280"	"-0.52"	"-0.00033"	"6/80"	"6"	"80"	"393099.340454102"	"HCD"	"MS2"	"58.93783"	"25.0"	"100.000"	"65.2262"	"21482"	"21482"	"21454"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.9"	""	"34.2"	""	"30.0"	""	"37.6"	""	"51.0"	"48.2"	""	"373"	"12"	"32.000"	"25.000"	"1.27256166457421"	"18"	"0.004942"	"0.05376"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINTPEVVR"	"[K].iINTPEVVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"635.38971"	"1269.77214"	"1269.77280"	"-0.52"	"-0.00033"	"7/80"	"7"	"80"	"644675.623046875"	"HCD"	"MS2"	"23.12184"	"35.4"	"100.000"	"66.4805"	"21993"	"21993"	"21973"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.6"	""	"42.4"	""	"50.0"	""	"58.4"	""	"68.5"	"60.3"	""	"373"	"42"	"32.000"	"25.000"	"0.00113940687644889"	"23"	"0.000936"	"0.01173"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDHTFFPGYR"	"[R].MDHTFFPGYR.[K]"	""	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"424.19354"	"1270.56607"	"1270.56735"	"-1.01"	"-0.00043"	"4/76"	"4"	"76"	"1598220.21289063"	"HCD"	"MS2"	"25.37229"	"17.4"	"100.000"	"52.1106"	"16198"	"16198"	"16173"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.4"	""	"15.2"	""	"24.0"	""	"32.9"	""	"31.7"	"43.4"	"NoQuanLabels"	"190"	"14"	"29.000"	"22.000"	"0.352958467642314"	"13"	"0.002937"	"0.02809"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDHTFFPGYR"	"[R].MDHTFFPGYR.[K]"	""	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"424.19379"	"1270.56681"	"1270.56735"	"-0.43"	"-0.00018"	"5/76"	"5"	"76"	"1617222.90795898"	"HCD"	"MS2"	"14.0944"	"16.1"	"100.000"	"52.4796"	"16337"	"16337"	"16316"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.8"	""	"19.7"	""	"18.0"	""	"24.2"	""	"35.6"	"36.0"	"NoQuanLabels"	"196"	"22"	"29.000"	"22.000"	"0.0590508394352871"	"14"	"0.001546"	"0.01854"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYHLPINR"	"[K].eYHLPINR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"424.24103"	"1270.70853"	"1270.71054"	"-1.58"	"-0.00067"	"6/58"	"6"	"58"	"1560929.465271"	"HCD"	"MS2"	"47.82872"	"38.0"	"100.000"	"45.6754"	"13576"	"13576"	"13550"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.5"	""	"49.5"	""	"60.9"	""	"54.5"	""	"71.7"	"70.5"	""	"563"	"17"	"34.000"	"27.000"	"0.582744789684678"	"20"	"0.004942"	"0.0557"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYHLPINR"	"[K].eYHLPINR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"0"	"3"	"3"	"0.4737"	"0.0000"	"1"	"1"	"1"	"424.24155"	"1270.71009"	"1270.71054"	"-0.35"	"-0.00015"	"6/58"	"6"	"58"	"1502806.03552246"	"HCD"	"MS2"	"29.28919"	"34.9"	"100.000"	"45.8250"	"13625"	"13625"	"13597"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.6"	""	"42.5"	""	"48.9"	""	"57.1"	""	"63.5"	"68.2"	""	"539"	"19"	"34.000"	"27.000"	"0.327008295200311"	"24"	"0.005119"	"0.05791"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEELEGVR"	"[R].iPEELEGVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"635.86304"	"1270.71880"	"1270.72043"	"-1.29"	"-0.00082"	"11/70"	"11"	"70"	"797581.86907959"	"HCD"	"MS2"	"6.895633"	"30.2"	"100.000"	"72.9078"	"24627"	"24627"	"24609"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.6"	""	"39.6"	""	"37.8"	""	"55.5"	"0.3"	"57.8"	"54.2"	""	"552"	"31"	"34.000"	"27.000"	"0.023763427560295"	"20"	"0.001036"	"0.01362"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEELEGVR"	"[R].iPEELEGVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"635.86322"	"1270.71916"	"1270.72043"	"-1.00"	"-0.00063"	"11/70"	"11"	"70"	"492370.815246582"	"HCD"	"MS2"	"49.83563"	"23.3"	"100.000"	"72.7339"	"24543"	"24543"	"24515"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.2"	""	"27.0"	""	"26.5"	""	"37.1"	""	"49.1"	"52.1"	""	"545"	"26"	"34.000"	"27.000"	"0.0646199334792801"	"19"	"0.001211"	"0.01498"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEELEGVR"	"[R].iPEELEGVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"635.86365"	"1270.72002"	"1270.72043"	"-0.33"	"-0.00021"	"11/70"	"11"	"70"	"585776.034362793"	"HCD"	"MS2"	"30.96359"	"25.5"	"100.000"	"72.6172"	"24509"	"24509"	"24481"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.8"	""	"32.6"	""	"31.9"	""	"46.1"	""	"44.9"	"51.3"	""	"544"	"23"	"34.000"	"27.000"	"0.142747629187938"	"24"	"0.003653"	"0.03766"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEELEGVR"	"[R].iPEELEGVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"635.86383"	"1270.72038"	"1270.72043"	"-0.04"	"-0.00002"	"13/70"	"13"	"70"	"632205.234069824"	"HCD"	"MS2"	"9.794312"	"27.2"	"100.000"	"73.0614"	"24676"	"24676"	"24654"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.7"	""	"43.4"	""	"28.7"	""	"49.8"	""	"48.9"	"53.5"	""	"546"	"26"	"34.000"	"27.000"	"0.0615407304917613"	"20"	"0.001134"	"0.01373"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGELNPEDR"	"[K].iGELNPEDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07116"	"Sulfite oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suox PE=1 SV=2"	"Q07116"	"Sulfite oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suox PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"636.34534"	"1271.68340"	"1271.67930"	"3.23"	"0.00205"	"6/82"	"6"	"82"	"1536889.65551758"	"HCD"	"MS2"	"18.75429"	"69.1"	"100.000"	"54.1290"	"17022"	"17022"	"17002"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"111.1"	""	"80.0"	""	"99.6"	""	"110.7"	""	"116.9"	"136.4"	""	"595"	"24"	"34.000"	"27.000"	"0.125454709770003"	""	"0.004069"	"0.04447"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGAELPTDR"	"[R].lAGAELPTDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15589"	"Steryl-sulfatase OS=Rattus norvegicus OX=10116 GN=Sts PE=1 SV=2"	"P15589"	"Steryl-sulfatase OS=Rattus norvegicus OX=10116 GN=Sts PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"636.36066"	"1271.71404"	"1271.71568"	"-1.29"	"-0.00082"	"6/80"	"6"	"80"	"879276.46875"	"HCD"	"MS2"	"46.29287"	"49.7"	"100.000"	"57.7545"	"18497"	"18497"	"18479"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.0"	""	"50.3"	""	"57.7"	""	"83.3"	""	"97.2"	"117.4"	""	"623"	"18"	"34.000"	"27.000"	"0.442036418006152"	"21"	"0.003449"	"0.03349"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLGEDPLSR"	"[R].rLGEDPLSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"1"	"3"	"3"	"0.4667"	"0.0000"	"1"	"1"	"1"	"424.58026"	"1271.72623"	"1271.72691"	"-0.54"	"-0.00023"	"10/88"	"10"	"88"	"6657494.17541504"	"HCD"	"MS2"	"35.93699"	"219.7"	"100.000"	"38.5856"	"10693"	"10693"	"10672"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"345.1"	""	"290.5"	""	"280.1"	""	"351.2"	""	"388.0"	"426.2"	""	"589"	"15"	"34.000"	"27.000"	"0.939907898327174"	"21"	"0.009594"	"0.1261"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLGEDPLSR"	"[R].rLGEDPLSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"1"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"424.58038"	"1271.72660"	"1271.72691"	"-0.25"	"-0.00011"	"8/88"	"8"	"88"	"5666422.74725342"	"HCD"	"MS2"	"20.96917"	"159.2"	"100.000"	"38.7362"	"10745"	"10745"	"10725"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"243.1"	""	"200.1"	""	"214.0"	""	"261.2"	""	"285.5"	"308.3"	""	"589"	"31"	"34.000"	"27.000"	"0.023555118809957"	"24"	"0.0004639"	"0.007647"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEEHLK"	"[R].aSEEHLk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"424.58313"	"1271.73484"	"1271.73597"	"-0.89"	"-0.00038"	"6/52"	"6"	"52"	"28465470.0692139"	"HCD"	"MS2"	"19.17909"	"672.5"	"49.813"	"26.0713"	"5624"	"5624"	"5611"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"984.3"	""	"760.5"	""	"896.2"	""	"1191.2"	""	"1213.5"	"1336.1"	""	"556"	"39"	"34.000"	"27.000"	"0.00336546281127034"	""	"0.000936"	"0.01251"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEEHLK"	"[R].aSEEHLk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"0"	"3"	"3"	"0.6341"	"0.0000"	"1"	"1"	"1"	"424.58337"	"1271.73557"	"1271.73597"	"-0.32"	"-0.00013"	"6/52"	"6"	"52"	"16716461.918457"	"HCD"	"MS2"	"32.75999"	"823.5"	"100.000"	"26.1222"	"5629"	"5629"	"5617"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1209.7"	""	"978.9"	""	"1026.8"	""	"1475.8"	""	"1527.3"	"1597.5"	""	"557"	"41"	"34.000"	"27.000"	"0.00214202827619821"	""	"0.001211"	"0.01436"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEEHLK"	"[R].aSEEHLk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"636.37231"	"1271.73735"	"1271.73597"	"1.09"	"0.00069"	"10/52"	"10"	"52"	"1027534.62316895"	"HCD"	"MS2"	"0"	"81.1"	"100.000"	"26.0599"	"5620"	"5620"	"5595"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"112.3"	""	"98.8"	""	"104.8"	""	"147.1"	""	"159.9"	"146.5"	""	"550"	"25"	"34.000"	"27.000"	"0.0820980220202439"	"23"	"0.006443"	"0.07235"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEEHLK"	"[R].aSEEHLk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"636.37299"	"1271.73870"	"1271.73597"	"2.14"	"0.00136"	"6/52"	"6"	"52"	"685546.629882813"	"HCD"	"MS2"	"100"	"55.0"	"100.000"	"26.1428"	"5638"	"5638"	"5617"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.1"	""	"67.1"	""	"70.6"	""	"100.2"	""	"99.7"	"105.4"	""	"595"	"19"	"34.000"	"27.000"	"0.35849819226061"	"19"	"0.007476"	"0.08922"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAEQELIR"	"[R].lAAEQELIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5778"	"0.0000"	"1"	"1"	"1"	"636.37903"	"1271.75078"	"1271.75207"	"-1.01"	"-0.00064"	"8/76"	"8"	"76"	"1192133.06829834"	"HCD"	"MS2"	"59.19613"	"54.7"	"100.000"	"66.7139"	"22104"	"22104"	"22077"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.7"	""	"81.8"	""	"86.7"	""	"70.7"	""	"90.4"	"110.6"	""	"567"	"45"	"34.000"	"27.000"	"0.00084246731999773"	""	"0"	"0.0001593"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAEQELIR"	"[R].lAAEQELIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"636.37939"	"1271.75151"	"1271.75207"	"-0.44"	"-0.00028"	"7/76"	"7"	"76"	"1205092.31616211"	"HCD"	"MS2"	"51.14351"	"54.2"	"100.000"	"66.8005"	"22124"	"22124"	"22100"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"73.1"	""	"77.8"	""	"92.8"	""	"67.7"	"0.4"	"99.6"	"102.2"	""	"564"	"39"	"34.000"	"27.000"	"0.00335157628137239"	""	"0"	"0.0001953"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAEQELIR"	"[R].lAAEQELIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"636.37952"	"1271.75176"	"1271.75207"	"-0.24"	"-0.00016"	"8/76"	"8"	"76"	"3706667.12335205"	"HCD"	"MS2"	"3.317283"	"149.9"	"100.000"	"67.0064"	"22223"	"22223"	"22204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"196.9"	""	"222.3"	""	"250.8"	""	"188.8"	"0.7"	"250.0"	"310.3"	""	"571"	"48"	"34.000"	"27.000"	"0.000447307430515877"	""	"0"	"0.000301"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAEQELIR"	"[R].lAAEQELIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"636.37964"	"1271.75200"	"1271.75207"	"-0.05"	"-0.00003"	"8/76"	"8"	"76"	"3209111.21337891"	"HCD"	"MS2"	"4.962806"	"131.3"	"100.000"	"67.1005"	"22246"	"22246"	"22226"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"181.8"	""	"198.3"	""	"204.0"	""	"160.1"	""	"224.9"	"276.9"	""	"586"	"48"	"34.000"	"27.000"	"0.000459058063541688"	""	"0"	"0.0002591"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAAEGPLK"	"[K].qAAEGPLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"636.38885"	"1271.77043"	"1271.77236"	"-1.51"	"-0.00096"	"7/70"	"7"	"70"	"1612429.90014648"	"HCD"	"MS2"	"18.63663"	"118.8"	"100.000"	"39.1468"	"10922"	"10922"	"10899"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"187.1"	""	"136.8"	""	"161.8"	""	"172.5"	""	"212.2"	"259.3"	""	"448"	"29"	"33.000"	"26.000"	"0.0267453335399997"	"17"	"0.0005778"	"0.008106"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAAEGPLK"	"[K].qAAEGPLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"424.59506"	"1271.77063"	"1271.77236"	"-1.36"	"-0.00057"	"11/70"	"11"	"70"	"9076221.6328125"	"HCD"	"MS2"	"39.549"	"315.2"	"100.000"	"38.6525"	"10721"	"10721"	"10704"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"499.4"	""	"393.5"	""	"415.1"	""	"493.6"	""	"563.9"	"625.7"	""	"448"	"34"	"33.000"	"26.000"	"0.00838007717729398"	"19"	"0.0001301"	"0.004051"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAAEGPLK"	"[K].qAAEGPLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"424.59518"	"1271.77100"	"1271.77236"	"-1.07"	"-0.00045"	"6/70"	"6"	"70"	"8332092.61920166"	"HCD"	"MS2"	"44.45266"	"308.4"	"100.000"	"38.8509"	"10792"	"10792"	"10773"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"513.8"	""	"380.6"	""	"396.2"	""	"476.6"	""	"521.2"	"638.8"	""	"437"	"32"	"33.000"	"26.000"	"0.0127776633385569"	"20"	"0.0002479"	"0.005777"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAAEGPLK"	"[K].qAAEGPLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"636.38916"	"1271.77104"	"1271.77236"	"-1.03"	"-0.00066"	"6/70"	"6"	"70"	"1694107.96484375"	"HCD"	"MS2"	"18.13204"	"118.8"	"100.000"	"39.3315"	"10988"	"10988"	"10967"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"188.2"	""	"143.0"	""	"147.4"	""	"174.6"	""	"208.4"	"268.8"	""	"437"	"34"	"33.000"	"26.000"	"0.00894234541510073"	"19"	"0.0001301"	"0.004141"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAAEGPLK"	"[K].qAAEGPLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"636.38916"	"1271.77104"	"1271.77236"	"-1.03"	"-0.00066"	"7/70"	"7"	"70"	"25087288.6585693"	"HCD"	"MS2"	"0"	"480.6"	"28.067"	"39.0375"	"10869"	"10869"	"10853"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"794.3"	""	"587.2"	""	"635.8"	""	"696.0"	""	"821.2"	"1025.3"	""	"437"	"35"	"33.000"	"26.000"	"0.00670581304463468"	"18"	"0.0003538"	"0.006253"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAAEGPLK"	"[K].qAAEGPLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.4815"	"0.0000"	"1"	"1"	"1"	"424.59521"	"1271.77109"	"1271.77236"	"-1.00"	"-0.00042"	"9/70"	"9"	"70"	"2652708.23510742"	"HCD"	"MS2"	"27.12776"	"128.4"	"100.000"	"39.1659"	"10921"	"10921"	"10899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"180.7"	""	"159.9"	""	"179.1"	""	"210.2"	""	"246.3"	"243.8"	""	"436"	"27"	"33.000"	"26.000"	"0.0476932034021002"	""	"0.0005778"	"0.00809"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAAEGPLK"	"[K].qAAEGPLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"424.59531"	"1271.77137"	"1271.77236"	"-0.78"	"-0.00033"	"10/70"	"10"	"70"	"2506073.85894775"	"HCD"	"MS2"	"24.13557"	"124.8"	"100.000"	"38.9653"	"10848"	"10848"	"10828"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"176.3"	""	"156.3"	""	"159.1"	""	"203.1"	""	"243.0"	"247.6"	""	"436"	"27"	"33.000"	"26.000"	"0.0436974901965605"	"22"	"0.0006732"	"0.008334"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAAEGPLK"	"[K].qAAEGPLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"636.38934"	"1271.77141"	"1271.77236"	"-0.75"	"-0.00047"	"7/70"	"7"	"70"	"8970754.35205078"	"HCD"	"MS2"	"3.021352"	"573.5"	"100.000"	"38.5418"	"10675"	"10675"	"10657"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1005.6"	""	"698.4"	""	"751.0"	""	"867.0"	""	"972.3"	"1136.9"	""	"436"	"36"	"33.000"	"26.000"	"0.00537596575517086"	"19"	"0.0006732"	"0.008246"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAAEGPLK"	"[K].qAAEGPLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"636.38947"	"1271.77165"	"1271.77236"	"-0.55"	"-0.00035"	"7/70"	"7"	"70"	"24104501.0100098"	"HCD"	"MS2"	"0"	"626.0"	"40.102"	"38.8387"	"10797"	"10797"	"10780"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1021.2"	""	"773.7"	""	"813.4"	""	"866.4"	""	"1114.9"	"1353.8"	""	"436"	"38"	"33.000"	"26.000"	"0.00369365640497517"	"19"	"0.0008629"	"0.01025"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAAEGPLK"	"[K].qAAEGPLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"636.38971"	"1271.77214"	"1271.77236"	"-0.17"	"-0.00011"	"7/70"	"7"	"70"	"7330486.63665771"	"HCD"	"MS2"	"5.599193"	"460.3"	"100.000"	"38.7313"	"10743"	"10743"	"10725"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"815.4"	""	"594.7"	""	"581.2"	""	"694.0"	""	"784.8"	"889.5"	""	"444"	"36"	"33.000"	"26.000"	"0.00506235939984093"	"17"	"0.0001301"	"0.004335"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENPYYDSR"	"[R].eNPYYDSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"636.80615"	"1272.60503"	"1272.60580"	"-0.60"	"-0.00038"	"5/80"	"5"	"80"	"6139481.27484131"	"HCD"	"MS2"	"0"	"280.0"	"100.000"	"33.2254"	"8524"	"8524"	"8507"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"436.3"	""	"350.8"	""	"352.0"	""	"431.3"	"1.2"	"519.5"	"562.8"	""	"271"	"32"	"31.000"	"24.000"	"0.007815185578965"	""	"0.0003538"	"0.007071"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENPYYDSR"	"[R].eNPYYDSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.6047"	"0.0000"	"1"	"1"	"1"	"636.80640"	"1272.60552"	"1272.60580"	"-0.22"	"-0.00014"	"6/80"	"6"	"80"	"6795951.47869873"	"HCD"	"MS2"	"0"	"292.9"	"100.000"	"33.2577"	"8530"	"8530"	"8514"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"428.3"	""	"369.2"	""	"382.1"	""	"433.4"	"3.1"	"600.2"	"562.2"	""	"281"	"43"	"31.000"	"24.000"	"0.000633397469880751"	""	"0"	"0.001933"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENPYYDSR"	"[R].eNPYYDSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"636.80646"	"1272.60564"	"1272.60580"	"-0.12"	"-0.00008"	"6/80"	"6"	"80"	"2688251.5914917"	"HCD"	"MS2"	"2.638031"	"128.7"	"100.000"	"33.5214"	"8643"	"8643"	"8632"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"212.8"	""	"170.6"	""	"166.2"	""	"172.1"	""	"237.2"	"261.0"	""	"279"	"46"	"31.000"	"24.000"	"0.000332333565975537"	""	"0"	"0.002656"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENPYYDSR"	"[R].eNPYYDSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"636.80688"	"1272.60649"	"1272.60580"	"0.55"	"0.00035"	"5/80"	"5"	"80"	"2440099.09228516"	"HCD"	"MS2"	"0"	"120.7"	"100.000"	"33.5422"	"8646"	"8646"	"8629"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"186.0"	""	"156.5"	""	"153.0"	""	"171.1"	"1.8"	"230.9"	"245.6"	""	"283"	"32"	"31.000"	"24.000"	"0.00850660838538838"	""	"0.0001301"	"0.004122"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHHWGYSK"	"[M].sHHWGYSk.[S]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"636.82001"	"1272.63274"	"1272.63229"	"0.35"	"0.00023"	"6/68"	"6"	"68"	"297717.88861084"	"HCD"	"MS2"	"0"	"22.6"	"100.000"	"30.8294"	"7541"	"7541"	"7525"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.0"	""	"27.6"	""	"38.2"	""	"36.4"	""	"39.4"	"44.8"	""	"345"	"39"	"32.000"	"25.000"	"0.00204545109058835"	"18"	"0.001374"	"0.01667"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHHWGYSK"	"[M].sHHWGYSk.[S]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"636.82001"	"1272.63274"	"1272.63229"	"0.35"	"0.00023"	"6/68"	"6"	"68"	"365575.430908203"	"HCD"	"MS2"	"0"	"26.6"	"100.000"	"30.7923"	"7538"	"7538"	"7522"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.9"	""	"29.7"	""	"40.4"	""	"47.4"	"0.7"	"43.7"	"50.4"	""	"345"	"36"	"32.000"	"25.000"	"0.00478397718052442"	"18"	"0.003449"	"0.03447"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQNNAALER"	"[K].qQNNAALER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"0.7167"	"0.0000"	"1"	"1"	"1"	"636.84534"	"1272.68340"	"1272.68578"	"-1.87"	"-0.00119"	"8/80"	"8"	"80"	"861276.368041992"	"HCD"	"MS2"	"0"	"50.4"	"100.000"	"22.3509"	"4123"	"4123"	"4097"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.1"	""	"56.1"	""	"55.5"	""	"76.4"	""	"111.9"	"108.7"	""	"638"	"60"	"35.000"	"28.000"	"3.39461622813557E-05"	""	"0"	"0.0001888"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQNNAALER"	"[K].qQNNAALER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"636.84656"	"1272.68584"	"1272.68578"	"0.05"	"0.00003"	"8/80"	"8"	"80"	"990474.832702637"	"HCD"	"MS2"	"0"	"60.5"	"100.000"	"22.4014"	"4127"	"4127"	"4104"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.8"	""	"71.2"	""	"66.7"	""	"108.5"	""	"116.1"	"128.0"	""	"670"	"46"	"35.000"	"28.000"	"0.000924793581833814"	""	"0"	"0.000363"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGDLLAAQAR"	"[K].eGDLLAAQAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"636.85809"	"1272.70891"	"1272.71093"	"-1.59"	"-0.00101"	"8/80"	"8"	"80"	"3160603.90155029"	"HCD"	"MS2"	"0"	"156.1"	"100.000"	"49.6207"	"15171"	"15171"	"15153"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"149.1"	""	"131.0"	""	"103.8"	""	"297.5"	""	"372.2"	"438.9"	""	"715"	"35"	"35.000"	"28.000"	"0.011462412835107"	"24"	"0"	"0.0002638"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGDLLAAQAR"	"[K].eGDLLAAQAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"636.85822"	"1272.70915"	"1272.71093"	"-1.40"	"-0.00089"	"9/80"	"9"	"80"	"3157153.3737793"	"HCD"	"MS2"	"0"	"149.6"	"100.000"	"49.2285"	"15023"	"15023"	"15004"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"138.9"	""	"119.1"	""	"100.8"	""	"276.7"	""	"365.5"	"430.6"	""	"721"	"37"	"35.000"	"28.000"	"0.00788688065433813"	"23"	"0"	"0.0002432"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGNQDLIR"	"[K].lDGNQDLIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"636.85834"	"1272.70940"	"1272.71093"	"-1.20"	"-0.00077"	"8/82"	"8"	"82"	"2085305.98730469"	"HCD"	"MS2"	"0"	"108.4"	"100.000"	"58.7168"	"18875"	"18875"	"18856"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"154.9"	""	"125.0"	""	"132.9"	""	"182.7"	""	"212.2"	"223.7"	""	"721"	"50"	"35.000"	"28.000"	"0.0003605"	""	"0"	"0.0005856"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGNQDLIR"	"[K].lDGNQDLIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"636.85870"	"1272.71013"	"1272.71093"	"-0.63"	"-0.00040"	"8/82"	"8"	"82"	"7148066.27288818"	"HCD"	"MS2"	"5.172793"	"320.2"	"100.000"	"59.0277"	"19002"	"19002"	"18984"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"465.5"	""	"362.2"	""	"385.8"	""	"542.6"	"1.6"	"618.7"	"661.4"	""	"709"	"52"	"35.000"	"28.000"	"0.000224706812640581"	""	"0"	"0.0002898"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGNQDLIR"	"[K].lDGNQDLIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"636.85901"	"1272.71074"	"1272.71093"	"-0.15"	"-0.00009"	"8/82"	"8"	"82"	"7369118.0692749"	"HCD"	"MS2"	"4.804853"	"335.7"	"100.000"	"58.8117"	"18929"	"18929"	"18911"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"507.9"	""	"394.7"	""	"413.0"	""	"557.4"	"2.1"	"634.1"	"673.5"	""	"757"	"50"	"35.000"	"28.000"	"0.000351613777396206"	""	"0"	"0.0003085"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGNQDLIR"	"[K].lDGNQDLIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"636.85913"	"1272.71099"	"1272.71093"	"0.04"	"0.00003"	"8/82"	"8"	"82"	"2236855.93737793"	"HCD"	"MS2"	"17.72782"	"111.6"	"100.000"	"58.5101"	"18806"	"18806"	"18783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"179.2"	""	"133.2"	""	"141.0"	""	"174.9"	""	"209.1"	"221.4"	""	"757"	"50"	"35.000"	"28.000"	"0.000361464693809113"	""	"0"	"0.0002961"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVESHTK"	"[R].nVESHTk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"636.86859"	"1272.72991"	"1272.73122"	"-1.03"	"-0.00066"	"6/66"	"6"	"66"	"731001.190185547"	"HCD"	"MS2"	"0"	"64.4"	"100.000"	"20.8810"	"3527"	"3527"	"3504"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"72.4"	""	"71.0"	""	"79.0"	""	"127.9"	""	"131.1"	"135.1"	""	"726"	"20"	"35.000"	"28.000"	"0.337214798401117"	"22"	"0.005309"	"0.05961"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVESHTK"	"[R].nVESHTk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"636.86945"	"1272.73161"	"1272.73122"	"0.31"	"0.00020"	"6/66"	"6"	"66"	"792704.329711914"	"HCD"	"MS2"	"0"	"65.0"	"100.000"	"20.9250"	"3528"	"3528"	"3512"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.7"	""	"72.1"	""	"73.3"	""	"132.0"	""	"133.9"	"129.8"	""	"719"	"33"	"35.000"	"28.000"	"0.0201232857737492"	"25"	"0.001728"	"0.02005"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVK"	"[M].aGLNSLEAVk.[R]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.8689"	"0.0000"	"1"	"1"	"1"	"636.87122"	"1272.73516"	"1272.73608"	"-0.73"	"-0.00046"	"7/88"	"7"	"88"	"136867.454528809"	"HCD"	"MS2"	"17.0442"	"8.1"	"100.000"	"94.7330"	"33216"	"33216"	"33205"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.3"	""	"9.6"	""	"9.8"	""	"14.9"	""	"13.9"	"18.3"	""	"780"	"61"	"35.000"	"28.000"	"2.88446057272712E-05"	"24"	"0.0001301"	"0.004434"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVK"	"[M].aGLNSLEAVk.[R]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.8676"	"0.0000"	"1"	"1"	"1"	"636.87134"	"1272.73540"	"1272.73608"	"-0.54"	"-0.00034"	"7/88"	"7"	"88"	"9133771.10083008"	"HCD"	"MS2"	"0"	"232.9"	"79.022"	"92.9495"	"32549"	"32549"	"32542"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"315.9"	""	"316.5"	""	"327.2"	""	"419.9"	"0.4"	"408.5"	"417.2"	""	"778"	"68"	"35.000"	"28.000"	"6.72898563734674E-06"	"25"	"0"	"0.0002046"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVK"	"[M].aGLNSLEAVk.[R]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.8806"	"0.0000"	"1"	"1"	"1"	"636.87140"	"1272.73552"	"1272.73608"	"-0.44"	"-0.00028"	"7/88"	"7"	"88"	"549350.490600586"	"HCD"	"MS2"	"11.38151"	"23.0"	"100.000"	"92.7209"	"32475"	"32475"	"32467"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.7"	""	"32.0"	""	"32.9"	""	"42.4"	""	"35.5"	"44.1"	""	"777"	"67"	"35.000"	"28.000"	"7.18440858472984E-06"	"25"	"0"	"0.0009214"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVK"	"[M].aGLNSLEAVk.[R]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.8676"	"0.0000"	"1"	"1"	"1"	"636.87146"	"1272.73564"	"1272.73608"	"-0.35"	"-0.00022"	"7/88"	"7"	"88"	"3575791.51654053"	"HCD"	"MS2"	"0.3153458"	"119.7"	"100.000"	"93.2641"	"32682"	"32682"	"32678"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"156.2"	""	"153.4"	""	"182.6"	""	"202.3"	""	"202.5"	"240.9"	""	"778"	"68"	"35.000"	"28.000"	"6.86988712246918E-06"	"25"	"0"	"0.0004282"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVK"	"[M].aGLNSLEAVk.[R]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.9206"	"0.0000"	"1"	"1"	"1"	"636.87164"	"1272.73601"	"1272.73608"	"-0.06"	"-0.00004"	"7/88"	"7"	"88"	"4488192.97155762"	"HCD"	"MS2"	"0"	"151.1"	"100.000"	"93.2279"	"32654"	"32654"	"32646"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"204.1"	""	"195.9"	""	"224.0"	""	"257.7"	""	"267.8"	"283.6"	""	"787"	"63"	"35.000"	"28.000"	"2.00421697761006E-05"	"22"	"0"	"0.0004771"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVK"	"[M].aGLNSLEAVk.[R]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.9153"	"0.0000"	"1"	"1"	"1"	"636.87170"	"1272.73613"	"1272.73608"	"0.04"	"0.00002"	"7/88"	"7"	"88"	"10630806.3111572"	"HCD"	"MS2"	"0"	"272.3"	"78.123"	"93.0005"	"32581"	"32581"	"32571"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"360.2"	""	"377.9"	""	"407.3"	""	"462.2"	""	"464.7"	"509.0"	""	"787"	"59"	"35.000"	"28.000"	"4.90845412854598E-05"	"21"	"0"	"0.0009258"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVK"	"[M].aGLNSLEAVk.[R]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.9322"	"0.0000"	"1"	"1"	"1"	"636.87207"	"1272.73686"	"1272.73608"	"0.61"	"0.00039"	"7/88"	"7"	"88"	"421417.617797852"	"HCD"	"MS2"	"0"	"18.0"	"100.000"	"92.6832"	"32447"	"32447"	"32440"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.3"	""	"22.7"	""	"30.3"	""	"29.8"	""	"31.4"	"36.6"	""	"747"	"59"	"35.000"	"28.000"	"5.1084671636005E-05"	"20"	"0"	"0.0002184"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPDADLK"	"[K].rPDADLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"0.3684"	"0.0000"	"1"	"1"	"1"	"424.92709"	"1272.76673"	"1272.76761"	"-0.69"	"-0.00029"	"5/64"	"5"	"64"	"12818493.3513184"	"HCD"	"MS2"	"16.76427"	"715.4"	"100.000"	"31.3761"	"7773"	"7773"	"7756"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"872.2"	""	"861.6"	""	"914.5"	""	"1195.3"	""	"1463.1"	"1493.2"	""	"652"	"19"	"35.000"	"28.000"	"0.398306689213748"	"25"	"0.001211"	"0.01543"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPDADLK"	"[K].rPDADLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"424.92712"	"1272.76682"	"1272.76761"	"-0.62"	"-0.00026"	"5/64"	"5"	"64"	"11260195.8686523"	"HCD"	"MS2"	"25.18069"	"663.7"	"100.000"	"31.3788"	"7764"	"7764"	"7741"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"799.1"	""	"790.0"	""	"835.3"	""	"1132.1"	""	"1370.3"	"1384.2"	""	"652"	"21"	"35.000"	"28.000"	"0.287884047536451"	"26"	"0.002379"	"0.02457"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDPIEDWR"	"[R].nDPIEDWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07071"	"Glucokinase regulatory protein OS=Rattus norvegicus OX=10116 GN=Gckr PE=1 SV=3"	"Q07071"	"Glucokinase regulatory protein OS=Rattus norvegicus OX=10116 GN=Gckr PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"637.32214"	"1273.63701"	"1273.63743"	"-0.33"	"-0.00021"	"7/78"	"7"	"78"	"1539816.84649658"	"HCD"	"MS2"	"33.85873"	"75.4"	"100.000"	"63.3135"	"20709"	"20709"	"20689"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"106.2"	""	"83.2"	""	"92.7"	""	"118.7"	"7.9"	"139.3"	"167.0"	""	"422"	"24"	"33.000"	"26.000"	"0.0895947279926721"	"24"	"0.005921"	"0.06857"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYLTDVDR"	"[K].yYLTDVDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"637.33441"	"1273.66155"	"1273.66258"	"-0.81"	"-0.00052"	"7/62"	"7"	"62"	"955748.545959473"	"HCD"	"MS2"	"25.81976"	"57.7"	"100.000"	"62.5285"	"20389"	"20389"	"20366"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"73.0"	""	"67.1"	""	"68.0"	""	"106.2"	"0.8"	"115.8"	"116.6"	""	"571"	"48"	"34.000"	"27.000"	"0.0005042037978059"	""	"0"	"0.002589"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYLDSLDR"	"[K].yYLDSLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P59215"	"Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"P59215"	"Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"637.33453"	"1273.66179"	"1273.66258"	"-0.62"	"-0.00040"	"6/62"	"6"	"62"	"1054491.25231934"	"HCD"	"MS2"	"33.14394"	"53.8"	"100.000"	"73.3684"	"24800"	"24800"	"24780"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.1"	""	"64.9"	""	"49.6"	""	"101.8"	""	"116.8"	"121.6"	""	"572"	"42"	"34.000"	"27.000"	"0.00195598731122489"	"27"	"0.0004639"	"0.007567"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYLTDVDR"	"[K].yYLTDVDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"637.33472"	"1273.66216"	"1273.66258"	"-0.33"	"-0.00021"	"7/62"	"7"	"62"	"695765.188415527"	"HCD"	"MS2"	"100"	"42.3"	"100.000"	"62.3979"	"20352"	"20352"	"20329"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.8"	""	"53.1"	""	"55.5"	""	"74.3"	"0.9"	"86.5"	"80.7"	""	"573"	"16"	"34.000"	"27.000"	"0.671621555589158"	"20"	"0.005617"	"0.06348"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYLDSLDR"	"[K].yYLDSLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P59215"	"Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"P59215"	"Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"2"	"2"	"0.5517"	"0.0000"	"1"	"1"	"1"	"637.33472"	"1273.66216"	"1273.66258"	"-0.33"	"-0.00021"	"7/62"	"7"	"62"	"1007325.14086914"	"HCD"	"MS2"	"39.43864"	"50.7"	"100.000"	"73.2006"	"24745"	"24745"	"24727"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.8"	""	"48.3"	""	"54.5"	""	"94.8"	"1.0"	"105.0"	"124.8"	""	"573"	"29"	"34.000"	"27.000"	"0.0361513588660227"	"27"	"0.0001301"	"0.004424"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQMPDGIR"	"[K].dIQMPDGIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.2800"	"0.0000"	"1"	"1"	"1"	"637.34192"	"1273.67656"	"1273.67719"	"-0.49"	"-0.00031"	"6/86"	"6"	"86"	"1443368.06402588"	"HCD"	"MS2"	"33.7786"	"73.5"	"100.000"	"70.2158"	"23530"	"23530"	"23512"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"93.9"	""	"82.0"	""	"70.3"	""	"121.0"	""	"164.2"	"168.6"	""	"618"	"25"	"34.000"	"27.000"	"0.0999904399912552"	""	"0.007686"	"0.09423"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQMPDGIR"	"[K].dIQMPDGIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5152"	"0.0000"	"1"	"1"	"1"	"637.34192"	"1273.67656"	"1273.67719"	"-0.49"	"-0.00031"	"12/86"	"12"	"86"	"1799145.40570068"	"HCD"	"MS2"	"6.100277"	"81.1"	"100.000"	"69.9181"	"23409"	"23409"	"23390"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"123.9"	""	"107.5"	""	"101.3"	""	"96.8"	""	"164.6"	"175.6"	""	"618"	"33"	"34.000"	"27.000"	"0.014353522004383"	""	"0"	"0.002168"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQMPDGIR"	"[K].dIQMPDGIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"637.34210"	"1273.67693"	"1273.67719"	"-0.20"	"-0.00013"	"6/86"	"6"	"86"	"1893971.54211426"	"HCD"	"MS2"	"4.676185"	"85.5"	"100.000"	"70.0882"	"23464"	"23464"	"23445"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"132.1"	""	"109.6"	""	"114.2"	""	"96.9"	""	"182.8"	"175.7"	""	"617"	"36"	"34.000"	"27.000"	"0.00792967098984194"	""	"0.001812"	"0.02026"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQMPDGIR"	"[K].dIQMPDGIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"637.34222"	"1273.67717"	"1273.67719"	"-0.01"	"-0.00001"	"6/86"	"6"	"86"	"1259809.08978271"	"HCD"	"MS2"	"43.9801"	"67.7"	"100.000"	"70.4047"	"23593"	"23593"	"23573"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"81.1"	""	"64.1"	""	"67.6"	""	"125.0"	"2.2"	"165.9"	"138.5"	""	"617"	"21"	"34.000"	"27.000"	"0.229749813949997"	"25"	"0.007935"	"0.09707"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDPAEAAK"	"[R].nDPAEAAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"637.36060"	"1273.71391"	"1273.71524"	"-1.04"	"-0.00066"	"7/76"	"7"	"76"	"4078432.51196289"	"HCD"	"MS2"	"10.20978"	"291.5"	"100.000"	"29.9092"	"7180"	"7180"	"7155"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"408.0"	""	"342.9"	""	"389.5"	""	"487.0"	""	"568.3"	"571.0"	""	"791"	"46"	"35.000"	"28.000"	"0.000944379362392162"	"26"	"0"	"0.003071"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDPAEAAK"	"[R].nDPAEAAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"637.36096"	"1273.71465"	"1273.71524"	"-0.46"	"-0.00029"	"7/76"	"7"	"76"	"3479077.36413574"	"HCD"	"MS2"	"13.45321"	"246.8"	"100.000"	"29.9279"	"7176"	"7176"	"7149"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"369.8"	""	"292.3"	""	"333.3"	""	"412.4"	""	"481.8"	"453.4"	""	"792"	"48"	"35.000"	"28.000"	"0.000561946778588881"	"27"	"0"	"0.001647"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDPAEAAK"	"[R].nDPAEAAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"637.36243"	"1273.71758"	"1273.71524"	"1.84"	"0.00117"	"6/76"	"6"	"76"	"537891.390075684"	"HCD"	"MS2"	"0"	"52.6"	"100.000"	"30.3682"	"7355"	"7355"	"7330"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"82.1"	""	"73.8"	""	"70.6"	""	"82.2"	"0.5"	"90.4"	"98.9"	""	"886"	"32"	"36.000"	"29.000"	"0.0312898676538492"	"22"	"0.004867"	"0.05209"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVK"	"[M].aGLnSLEAVk.[R]"	"N-Term(Prot)(Acetyl); N4(Deamidated); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"637.36353"	"1273.71977"	"1273.72010"	"-0.25"	"-0.00016"	"7/88"	"7"	"88"	"506769.475158691"	"HCD"	"MS2"	"0"	"23.0"	"100.000"	"87.7971"	"30566"	"30566"	"30554"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.7"	""	"29.6"	""	"28.8"	""	"36.4"	""	"50.0"	"50.1"	""	"865"	"62"	"36.000"	"29.000"	"2.61809928331068E-05"	""	"0"	"0.0008722"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVK"	"[M].aGLnSLEAVk.[R]"	"N-Term(Prot)(Acetyl); N4(Deamidated); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.7069"	"0.0000"	"1"	"1"	"1"	"637.36389"	"1273.72051"	"1273.72010"	"0.32"	"0.00020"	"7/88"	"7"	"88"	"486154.298156738"	"HCD"	"MS2"	"1.994407"	"20.9"	"100.000"	"87.8429"	"30589"	"30589"	"30576"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.9"	""	"23.9"	""	"23.1"	""	"39.2"	""	"39.2"	"48.1"	""	"825"	"58"	"36.000"	"29.000"	"6.30120999023205E-05"	""	"0"	"0.001468"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVK"	"[M].aGLnSLEAVk.[R]"	"N-Term(Prot)(Acetyl); N4(Deamidated); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"637.36395"	"1273.72063"	"1273.72010"	"0.42"	"0.00026"	"7/88"	"7"	"88"	"314706.467224121"	"HCD"	"MS2"	"14.08204"	"16.4"	"100.000"	"87.5187"	"30457"	"30457"	"30432"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.7"	""	"21.1"	""	"22.0"	""	"28.3"	""	"33.7"	"31.3"	""	"825"	"62"	"36.000"	"29.000"	"2.86697531005379E-05"	""	"0"	"0.001222"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVK"	"[M].aGLnSLEAVk.[R]"	"N-Term(Prot)(Acetyl); N4(Deamidated); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"637.36426"	"1273.72124"	"1273.72010"	"0.90"	"0.00057"	"7/88"	"7"	"88"	"282927.362609863"	"HCD"	"MS2"	"9.547365"	"13.7"	"100.000"	"87.5394"	"30471"	"30471"	"30450"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.6"	""	"15.4"	""	"18.9"	""	"21.8"	""	"30.4"	"25.9"	""	"865"	"62"	"36.000"	"29.000"	"2.82478964020032E-05"	""	"0"	"0.0006885"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLLTADDR"	"[R].qLLLTADDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.6596"	"0.0000"	"1"	"1"	"1"	"637.36871"	"1273.73015"	"1273.73133"	"-0.93"	"-0.00059"	"7/86"	"7"	"86"	"5201367.92388916"	"HCD"	"MS2"	"42.91244"	"220.6"	"100.000"	"62.6049"	"20436"	"20436"	"20417"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"316.9"	""	"233.4"	""	"251.1"	""	"351.6"	""	"421.0"	"523.2"	""	"847"	"47"	"36.000"	"29.000"	"0.000862687319908372"	""	"0"	"0.0002692"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLLTADDR"	"[R].qLLLTADDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"637.36877"	"1273.73027"	"1273.73133"	"-0.83"	"-0.00053"	"8/86"	"8"	"86"	"6652277.91229248"	"HCD"	"MS2"	"4.164568"	"257.8"	"100.000"	"62.8884"	"20552"	"20552"	"20535"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"387.3"	""	"267.3"	""	"285.8"	""	"401.2"	""	"461.5"	"647.2"	""	"849"	"69"	"36.000"	"29.000"	"5.64777900431699E-06"	""	"0"	"0.0001775"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLLTADDR"	"[R].qLLLTADDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"637.36890"	"1273.73052"	"1273.73133"	"-0.64"	"-0.00041"	"8/86"	"8"	"86"	"7193458.83520508"	"HCD"	"MS2"	"3.811135"	"284.2"	"100.000"	"63.0051"	"20584"	"20584"	"20567"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"415.8"	""	"285.8"	""	"334.4"	""	"464.2"	""	"488.1"	"715.4"	""	"846"	"69"	"36.000"	"29.000"	"5.6668323878117E-06"	""	"0"	"0.0001882"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLLTADDR"	"[R].qLLLTADDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.5400"	"0.0000"	"1"	"1"	"1"	"637.36920"	"1273.73113"	"1273.73133"	"-0.16"	"-0.00010"	"6/86"	"6"	"86"	"4402514.8404541"	"HCD"	"MS2"	"45.62983"	"194.4"	"100.000"	"62.6989"	"20459"	"20459"	"20442"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"262.8"	""	"221.8"	""	"231.4"	""	"332.4"	""	"352.3"	"449.4"	""	"919"	"50"	"36.000"	"29.000"	"0.000503831731127794"	""	"0"	"0.0001926"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STSEDCMAR"	"[K].sTSEDcMAR.[E]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.77197"	"1274.53667"	"1274.53766"	"-0.78"	"-0.00050"	"8/72"	"8"	"72"	"1350140.64306641"	"HCD"	"MS2"	"9.095616"	"95.0"	"100.000"	"35.7512"	"9540"	"9540"	"9521"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"186.6"	""	"106.2"	""	"97.6"	""	"160.4"	"0.1"	"172.0"	"176.6"	""	"75"	"26"	"25.000"	"18.000"	"0.0091839871569178"	"14"	"0"	"0.0007288"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STSEDCMAR"	"[K].sTSEDcMAR.[E]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.77216"	"1274.53703"	"1274.53766"	"-0.49"	"-0.00031"	"6/72"	"6"	"72"	"1133615.81719971"	"HCD"	"MS2"	"0"	"80.6"	"100.000"	"35.7403"	"9540"	"9540"	"9520"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"126.6"	""	"99.7"	""	"96.8"	""	"133.6"	"1.6"	"156.5"	"149.6"	""	"75"	"14"	"25.000"	"18.000"	"0.139005270668466"	"13"	"0"	"0.001351"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNCELYEK"	"[K].TNcELYEk.[L]"	"C3(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.80109"	"1274.59490"	"1274.59583"	"-0.73"	"-0.00046"	"6/80"	"6"	"80"	"1134309.71502686"	"HCD"	"MS2"	"25.91184"	"68.7"	"100.000"	"56.0617"	"17793"	"17793"	"17773"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"102.8"	""	"96.3"	""	"96.1"	""	"85.7"	"3.8"	"133.7"	"133.2"	""	"245"	"37"	"30.000"	"23.000"	"0.00246113869544569"	"15"	"0.003507"	"0.03612"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNCELYEK"	"[K].TNcELYEk.[L]"	"C3(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.80188"	"1274.59648"	"1274.59583"	"0.52"	"0.00033"	"6/80"	"6"	"80"	"1037680.8369751"	"HCD"	"MS2"	"30.71458"	"67.1"	"100.000"	"55.9141"	"17747"	"17747"	"17729"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"104.3"	""	"96.4"	""	"97.4"	""	"80.3"	""	"132.5"	"124.8"	""	"247"	"37"	"30.000"	"23.000"	"0.00242474994189252"	"15"	"0.002937"	"0.02805"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDTAENLLR"	"[R].nDTAENLLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"637.84821"	"1274.68913"	"1274.69019"	"-0.83"	"-0.00053"	"6/86"	"6"	"86"	"2730294.88696289"	"HCD"	"MS2"	"38.84208"	"142.5"	"100.000"	"50.0349"	"15352"	"15352"	"15334"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"168.4"	""	"145.8"	""	"187.8"	""	"247.4"	""	"317.8"	"289.3"	""	"753"	"34"	"35.000"	"28.000"	"0.0152673963596316"	"24"	"0"	"0.0008733"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDTAENLLR"	"[R].nDTAENLLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"637.84851"	"1274.68974"	"1274.69019"	"-0.35"	"-0.00023"	"6/86"	"6"	"86"	"2676538.027771"	"HCD"	"MS2"	"47.73577"	"144.5"	"100.000"	"50.3603"	"15473"	"15473"	"15454"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"173.2"	""	"160.8"	""	"172.3"	""	"272.9"	""	"315.8"	"280.4"	""	"755"	"36"	"35.000"	"28.000"	"0.010090599192704"	"23"	"0"	"0.001235"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATAYEHLK"	"[M].aATAYEHLk.[L]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"2"	"2"	"0.6731"	"0.0000"	"1"	"1"	"1"	"637.85016"	"1274.69304"	"1274.69422"	"-0.92"	"-0.00059"	"7/70"	"7"	"70"	"6215646.84143066"	"HCD"	"MS2"	"0"	"178.6"	"100.000"	"58.2201"	"18688"	"18688"	"18671"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"225.8"	""	"232.2"	""	"267.3"	""	"289.9"	""	"335.2"	"344.3"	""	"870"	"52"	"36.000"	"29.000"	"0.000265148550299474"	""	"0"	"0.0004995"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATAYEHLK"	"[M].aATAYEHLk.[L]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"2"	"2"	"0.6383"	"0.0000"	"1"	"1"	"1"	"637.85040"	"1274.69353"	"1274.69422"	"-0.54"	"-0.00034"	"7/70"	"7"	"70"	"2112654.3614502"	"HCD"	"MS2"	"53.23544"	"72.1"	"100.000"	"57.9295"	"18569"	"18569"	"18543"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"93.7"	""	"94.9"	""	"106.6"	""	"110.7"	""	"131.7"	"151.7"	""	"868"	"47"	"36.000"	"29.000"	"0.000902588362203004"	""	"0"	"0.001868"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATAYEHLK"	"[M].aATAYEHLk.[L]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"2"	"2"	"0.6304"	"0.0000"	"1"	"1"	"1"	"637.85040"	"1274.69353"	"1274.69422"	"-0.54"	"-0.00034"	"6/70"	"6"	"70"	"2097804.23187256"	"HCD"	"MS2"	"46.11848"	"75.5"	"100.000"	"58.1205"	"18632"	"18632"	"18607"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"93.3"	""	"106.7"	""	"102.4"	""	"114.6"	""	"146.3"	"153.9"	""	"868"	"46"	"36.000"	"29.000"	"0.00102209138921087"	""	"0"	"0.002853"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATAYEHLK"	"[M].aATAYEHLk.[L]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"2"	"2"	"0.6731"	"0.0000"	"1"	"1"	"1"	"637.85052"	"1274.69377"	"1274.69422"	"-0.35"	"-0.00022"	"7/70"	"7"	"70"	"6116444.69299316"	"HCD"	"MS2"	"0"	"170.9"	"100.000"	"58.4132"	"18752"	"18752"	"18735"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"238.6"	""	"234.8"	""	"238.9"	""	"269.9"	""	"303.0"	"334.3"	""	"868"	"52"	"36.000"	"29.000"	"0.000265148838809018"	""	"0"	"0.0003962"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSEDSPPK"	"[K].gSEDSPPk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5PQL5"	"Phosphatidylserine synthase 1 OS=Rattus norvegicus OX=10116 GN=Ptdss1 PE=2 SV=1"	"Q5PQL5"	"Phosphatidylserine synthase 1 OS=Rattus norvegicus OX=10116 GN=Ptdss1 PE=2 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"637.85187"	"1274.69646"	"1274.69925"	"-2.19"	"-0.00140"	"6/62"	"6"	"62"	"535312.595397949"	"HCD"	"MS2"	"0"	"43.2"	"100.000"	"26.7689"	"5907"	"5907"	"5882"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.1"	""	"41.9"	"2.0"	"54.1"	""	"79.8"	""	"97.6"	"86.1"	""	"844"	"26"	"36.000"	"29.000"	"0.0960091115785814"	"28"	"0.002056"	"0.02249"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELANAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"425.57999"	"1274.72541"	"1274.72658"	"-0.92"	"-0.00039"	"13/80"	"13"	"80"	"2050696.706604"	"HCD"	"MS2"	"53.56623"	"48.4"	"100.000"	"53.8303"	"16889"	"16889"	"16864"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.0"	""	"46.4"	""	"62.8"	""	"79.9"	""	"101.9"	"106.8"	""	"896"	"40"	"36.000"	"29.000"	"0.00448"	"22"	"0"	"0.0004451"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELANAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"637.86652"	"1274.72576"	"1274.72658"	"-0.65"	"-0.00041"	"9/80"	"9"	"80"	"20302205.3013916"	"HCD"	"MS2"	"0.7043434"	"300.2"	"39.432"	"53.8488"	"16897"	"16897"	"16880"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"358.9"	""	"299.3"	""	"299.3"	""	"595.0"	""	"649.9"	"653.6"	""	"894"	"57"	"36.000"	"29.000"	"8.43932133046043E-05"	"28"	"0"	"0.0001774"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELANAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"425.58026"	"1274.72623"	"1274.72658"	"-0.27"	"-0.00012"	"7/80"	"7"	"80"	"2075494.63201904"	"HCD"	"MS2"	"54.31979"	"49.1"	"100.000"	"53.5975"	"16805"	"16805"	"16780"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.2"	""	"58.6"	""	"61.2"	""	"79.5"	""	"99.0"	"122.1"	""	"942"	"35"	"36.000"	"29.000"	"0.0146224756600846"	"22"	"0"	"0.002464"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELANAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.8475"	"0.0000"	"1"	"1"	"1"	"637.86688"	"1274.72649"	"1274.72658"	"-0.07"	"-0.00005"	"9/80"	"9"	"80"	"20180629.6807861"	"HCD"	"MS2"	"0.8071668"	"450.4"	"54.548"	"53.5812"	"16798"	"16798"	"16780"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"540.9"	""	"415.4"	""	"436.0"	""	"900.0"	""	"985.1"	"1013.8"	""	"966"	"59"	"36.000"	"29.000"	"6.48555476229588E-05"	"25"	"0"	"0.0001494"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELANAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"637.86743"	"1274.72759"	"1274.72658"	"0.79"	"0.00050"	"8/80"	"8"	"80"	"1728936.2053833"	"HCD"	"MS2"	"22.81008"	"93.2"	"100.000"	"53.2934"	"16681"	"16681"	"16653"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"109.8"	""	"100.1"	""	"96.4"	""	"179.7"	""	"194.7"	"206.2"	""	"927"	"31"	"36.000"	"29.000"	"0.0369870537548707"	"18"	"0"	"0.0002167"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELANAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"637.86755"	"1274.72783"	"1274.72658"	"0.98"	"0.00063"	"9/80"	"9"	"80"	"2311964.21496582"	"HCD"	"MS2"	"42.50236"	"103.1"	"100.000"	"53.5611"	"16779"	"16779"	"16754"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"133.1"	""	"99.0"	""	"108.8"	""	"205.7"	""	"224.0"	"209.7"	""	"927"	"54"	"36.000"	"29.000"	"0.000197719606964538"	"26"	"0"	"9.112E-05"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELANAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7018"	"0.0000"	"1"	"1"	"1"	"637.86768"	"1274.72807"	"1274.72658"	"1.17"	"0.00075"	"9/80"	"9"	"80"	"2492130.26641846"	"HCD"	"MS2"	"3.007146"	"107.3"	"100.000"	"53.8943"	"16926"	"16926"	"16907"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"123.6"	""	"110.0"	""	"110.0"	""	"212.4"	"0.9"	"236.9"	"226.6"	""	"921"	"57"	"36.000"	"29.000"	"9.20936390965878E-05"	""	"0"	"4.611E-05"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELANAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"637.86804"	"1274.72881"	"1274.72658"	"1.75"	"0.00111"	"8/80"	"8"	"80"	"1865914.95428467"	"HCD"	"MS2"	"9.399898"	"84.8"	"100.000"	"54.1712"	"17028"	"17028"	"17008"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"101.7"	""	"79.1"	""	"98.3"	""	"160.7"	""	"186.5"	"180.3"	""	"925"	"49"	"36.000"	"29.000"	"0.000602714635034188"	"26"	"0"	"0.00054"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMEVAQANR"	"[R].qMEVAQANR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"638.33862"	"1275.66997"	"1275.66769"	"1.79"	"0.00114"	"7/80"	"7"	"80"	"455647.077514648"	"HCD"	"MS2"	"0"	"37.9"	"100.000"	"28.8185"	"6725"	"6725"	"6700"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.8"	""	"42.2"	""	"49.1"	""	"58.4"	""	"76.6"	"86.6"	""	"719"	"40"	"35.000"	"28.000"	"0.00376442713024299"	"21"	"0.0008629"	"0.01117"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEEMLQR"	"[K].lQEEMLQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.2759"	"0.0000"	"1"	"1"	"1"	"638.34937"	"1275.69145"	"1275.69284"	"-1.08"	"-0.00069"	"6/70"	"6"	"70"	"2144337.49658203"	"HCD"	"MS2"	"10.98846"	"127.1"	"100.000"	"56.9783"	"18181"	"18181"	"18163"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"163.1"	""	"168.4"	""	"162.9"	""	"144.3"	""	"271.2"	"300.2"	""	"907"	"29"	"36.000"	"29.000"	"0.0570922674248655"	""	"0.001134"	"0.01394"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEEMLQR"	"[K].lQEEMLQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.3438"	"0.0000"	"1"	"1"	"1"	"638.34967"	"1275.69206"	"1275.69284"	"-0.61"	"-0.00039"	"5/70"	"5"	"70"	"1955667.4118042"	"HCD"	"MS2"	"6.775703"	"119.2"	"100.000"	"57.1600"	"18241"	"18241"	"18222"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"163.1"	""	"163.9"	""	"146.9"	""	"144.1"	""	"247.4"	"266.9"	""	"902"	"32"	"36.000"	"29.000"	"0.0298659643169495"	""	"0.0004639"	"0.007922"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNWSELR"	"[R].eLNWSELR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"638.34979"	"1275.69231"	"1275.68947"	"2.23"	"0.00142"	"6/76"	"6"	"76"	"421768.571899414"	"HCD"	"MS2"	"36.52992"	"20.4"	"100.000"	"80.9299"	"27858"	"27858"	"27839"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.3"	""	"20.3"	""	"28.7"	""	"36.8"	""	"39.5"	"38.0"	""	"900"	"24"	"36.000"	"29.000"	"0.16040301004181"	"25"	"0.006958"	"0.08117"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LQEEMLQR"	"[K].lQEEMLQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.0345"	"0.0000"	"1"	"1"	"1"	"638.35229"	"1275.69731"	"1275.69284"	"3.51"	"0.00224"	"5/70"	"5"	"70"	"9498961.48083496"	"HCD"	"MS2"	"0"	"398.2"	"100.000"	"56.8516"	"18116"	"18116"	"18099"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"462.0"	""	"551.6"	""	"487.9"	""	"461.1"	""	"880.6"	"950.1"	""	"990"	"29"	"36.000"	"29.000"	"0.0639153540438699"	""	"0.00447"	"0.04791"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ALTSELANAR"	"[K].aLTSELAnAR.[D]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	""	"0.0345"	"2"	"2"	"2"	"638.35229"	"1275.69731"	"1275.71060"	"-10.41"	"-0.00664"	"9/80"	"9"	"80"	"9498961.48083496"	"HCD"	"MS2"	"0"	"398.2"	"100.000"	"56.8516"	"18116"	"18116"	"18099"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"462.0"	""	"551.6"	""	"487.9"	""	"461.1"	""	"880.6"	"950.1"	""	"990"	"28"	"36.000"	"29.000"	"0.0864181965695649"	""	"0.0001301"	"0.00495"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELAnAR.[D]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.0625"	"0.0000"	"1"	"1"	"1"	"638.35254"	"1275.69780"	"1275.71060"	"-10.03"	"-0.00640"	"9/80"	"9"	"80"	"10232385.0822754"	"HCD"	"MS2"	"0.353944"	"437.7"	"100.000"	"56.6676"	"18055"	"18055"	"18038"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"526.7"	""	"603.1"	""	"554.6"	""	"516.8"	""	"932.1"	"1029.4"	""	"994"	"32"	"36.000"	"29.000"	"0.0300854414752695"	""	"0"	"0.002026"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELAnAR.[D]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.5962"	"0.0000"	"1"	"1"	"1"	"638.35822"	"1275.70915"	"1275.71060"	"-1.13"	"-0.00072"	"8/80"	"8"	"80"	"2248908.0534668"	"HCD"	"MS2"	"0"	"117.7"	"100.000"	"52.3659"	"16302"	"16302"	"16283"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"98.2"	""	"101.1"	""	"101.4"	""	"234.8"	""	"295.5"	"291.9"	""	"939"	"52"	"36.000"	"29.000"	"0.000308060202529214"	""	"0"	"4.782E-05"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELAnAR.[D]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.5745"	"0.0000"	"1"	"1"	"1"	"638.35858"	"1275.70989"	"1275.71060"	"-0.56"	"-0.00036"	"8/80"	"8"	"80"	"2418656.18713379"	"HCD"	"MS2"	"32.23557"	"127.7"	"100.000"	"56.3772"	"17936"	"17936"	"17910"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"126.8"	""	"111.6"	""	"136.3"	""	"244.5"	""	"298.2"	"301.3"	""	"925"	"47"	"36.000"	"29.000"	"0.00100951258422739"	""	"0"	"4.27E-05"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELAnAR.[D]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"638.35870"	"1275.71013"	"1275.71060"	"-0.37"	"-0.00023"	"8/80"	"8"	"80"	"2309410.89807129"	"HCD"	"MS2"	"33.23521"	"115.6"	"100.000"	"56.5452"	"17990"	"17990"	"17972"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"124.8"	""	"103.5"	""	"105.5"	""	"230.9"	""	"272.4"	"264.4"	""	"920"	"44"	"36.000"	"29.000"	"0.00199874703118923"	""	"0"	"5.298E-05"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELAnAR.[D]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.6170"	"0.0000"	"1"	"1"	"1"	"638.35907"	"1275.71086"	"1275.71060"	"0.21"	"0.00013"	"8/80"	"8"	"80"	"1774432.26257324"	"HCD"	"MS2"	"5.461786"	"90.7"	"100.000"	"52.6699"	"16426"	"16426"	"16408"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"101.0"	""	"82.6"	""	"100.7"	""	"172.3"	""	"199.8"	"207.1"	""	"976"	"47"	"36.000"	"29.000"	"0.000923463685898748"	""	"0"	"7.59E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELAnAR.[D]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.6981"	"0.0000"	"1"	"1"	"1"	"638.35913"	"1275.71099"	"1275.71060"	"0.30"	"0.00019"	"9/80"	"9"	"80"	"2283671.17687988"	"HCD"	"MS2"	"2.280205"	"111.4"	"100.000"	"52.6660"	"16413"	"16413"	"16393"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"99.8"	""	"87.4"	""	"94.5"	""	"227.1"	""	"276.8"	"280.1"	""	"923"	"53"	"36.000"	"29.000"	"0.000224994398182713"	""	"0"	"3.409E-05"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELAnAR.[D]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"638.35919"	"1275.71111"	"1275.71060"	"0.40"	"0.00026"	"6/80"	"6"	"80"	"1679695.73858643"	"HCD"	"MS2"	"5.810264"	"91.6"	"100.000"	"52.9673"	"16536"	"16536"	"16517"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"95.8"	""	"95.4"	""	"96.9"	""	"167.1"	""	"215.7"	"208.5"	""	"927"	"45"	"36.000"	"29.000"	"0.00134911738422387"	"27"	"0"	"0.0005534"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELNNEK"	"[K].aELNNEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"638.36853"	"1275.72978"	"1275.73089"	"-0.86"	"-0.00055"	"6/62"	"6"	"62"	"3387804.55657959"	"HCD"	"MS2"	"5.900567"	"259.4"	"100.000"	"33.7513"	"8736"	"8736"	"8715"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"328.4"	""	"242.5"	""	"264.1"	""	"458.8"	""	"588.6"	"589.6"	""	"919"	"35"	"36.000"	"29.000"	"0.015641756316761"	"28"	"0.004942"	"0.05302"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELNNEK"	"[K].aELNNEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"638.36884"	"1275.73039"	"1275.73089"	"-0.39"	"-0.00025"	"6/62"	"6"	"62"	"3339934.25811768"	"HCD"	"MS2"	"8.873085"	"247.0"	"100.000"	"33.7467"	"8728"	"8728"	"8707"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"323.3"	""	"231.2"	""	"239.2"	""	"419.1"	""	"570.4"	"572.5"	""	"923"	"35"	"36.000"	"29.000"	"0.015746052871352"	"28"	"0.004542"	"0.049"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEEELK"	"[K].gLEEELk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.3939"	"0.0000"	"1"	"1"	"1"	"638.38092"	"1275.75456"	"1275.75604"	"-1.16"	"-0.00074"	"6/52"	"6"	"52"	"6109412.87023926"	"HCD"	"MS2"	"0"	"475.3"	"100.000"	"60.2921"	"19492"	"19492"	"19481"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"944.0"	""	"747.6"	""	"463.3"	""	"833.5"	""	"791.2"	"714.5"	""	"801"	"33"	"36.000"	"29.000"	"0.0186897081815872"	""	"0.004942"	"0.05601"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEEELK"	"[K].gLEEELk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.3784"	"0.0000"	"1"	"1"	"1"	"638.38104"	"1275.75481"	"1275.75604"	"-0.96"	"-0.00062"	"12/52"	"12"	"52"	"6978909.16101074"	"HCD"	"MS2"	"0"	"541.6"	"100.000"	"60.0325"	"19401"	"19401"	"19391"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1072.2"	""	"853.1"	""	"553.9"	""	"954.3"	""	"880.2"	"807.0"	""	"761"	"37"	"35.000"	"28.000"	"0.00844023737733983"	""	"0.004938"	"0.05267"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEEELK"	"[K].gLEEELk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"638.38129"	"1275.75530"	"1275.75604"	"-0.58"	"-0.00037"	"6/52"	"6"	"52"	"2276350.74963379"	"HCD"	"MS2"	"19.16269"	"195.7"	"100.000"	"59.7654"	"19303"	"19303"	"19295"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"385.7"	""	"304.8"	""	"176.4"	""	"387.8"	""	"328.9"	"275.3"	""	"761"	"33"	"35.000"	"28.000"	"0.0196044499263358"	""	"0.003507"	"0.03693"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIEAVK"	"[R].eEIEAVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"638.38141"	"1275.75554"	"1275.75604"	"-0.39"	"-0.00025"	"6/54"	"6"	"54"	"3103390.62518311"	"HCD"	"MS2"	"12.55456"	"244.5"	"100.000"	"50.5109"	"15545"	"15545"	"15529"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"306.4"	""	"221.7"	""	"257.4"	""	"450.4"	""	"560.7"	"534.2"	""	"757"	"33"	"35.000"	"28.000"	"0.0206569350423046"	""	"0.003507"	"0.03609"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EELNALK"	"[K].eELnALk.[A]"	"N-Term(TMT6plex); N4(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q66HF9"	"Leucine-rich repeat flightless-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Lrrfip1 PE=1 SV=1"	"Q66HF9"	"Leucine-rich repeat flightless-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Lrrfip1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"638.38202"	"1275.75676"	"1275.75604"	"0.57"	"0.00036"	"5/56"	"5"	"56"	"285866.27331543"	"HCD"	"MS2"	"40.90472"	"24.2"	"100.000"	"66.5226"	"22026"	"22026"	"21997"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.2"	""	"27.5"	""	"29.2"	""	"44.0"	""	"46.3"	"49.2"	""	"727"	"20"	"35.000"	"28.000"	"0.324716543337053"	""	"0.004069"	"0.04444"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIEAVK"	"[R].eEIEAVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"638.38214"	"1275.75701"	"1275.75604"	"0.76"	"0.00048"	"6/54"	"6"	"54"	"2972071.30432129"	"HCD"	"MS2"	"8.532207"	"235.4"	"100.000"	"50.8868"	"15687"	"15687"	"15674"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"277.9"	""	"212.1"	""	"238.9"	""	"429.7"	""	"550.3"	"538.3"	""	"725"	"33"	"35.000"	"28.000"	"0.0202912130541977"	""	"0.003717"	"0.03805"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEEELK"	"[K].gLEEELk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.2400"	"0.0000"	"1"	"1"	"1"	"638.38226"	"1275.75725"	"1275.75604"	"0.95"	"0.00061"	"10/52"	"10"	"52"	"2605032.10437012"	"HCD"	"MS2"	"0"	"219.5"	"100.000"	"60.0258"	"19394"	"19394"	"19391"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"423.1"	""	"352.6"	""	"210.1"	""	"406.5"	"0.3"	"362.1"	"319.7"	""	"732"	"25"	"35.000"	"28.000"	"0.117619975714235"	""	"0.005427"	"0.06265"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLQNMEAR"	"[K].eGLQNMEAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"638.82904"	"1276.65080"	"1276.65170"	"-0.70"	"-0.00045"	"7/86"	"7"	"86"	"3490208.12207031"	"HCD"	"MS2"	"51.79063"	"200.5"	"100.000"	"38.8593"	"10805"	"10805"	"10780"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"302.5"	""	"199.4"	""	"201.8"	""	"348.2"	""	"411.2"	"442.8"	""	"647"	"27"	"35.000"	"28.000"	"0.0693225109462339"	"22"	"0.0002479"	"0.005729"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSLLESDR"	"[R].iDSLLESDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"638.85040"	"1276.69353"	"1276.69461"	"-0.85"	"-0.00054"	"8/76"	"8"	"76"	"1310448.57836914"	"HCD"	"MS2"	"0"	"62.0"	"100.000"	"80.6122"	"27730"	"27730"	"27714"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"104.8"	""	"80.4"	""	"70.4"	""	"95.9"	""	"130.7"	"109.5"	""	"849"	"51"	"36.000"	"29.000"	"0.000371430612584047"	""	"0"	"0.0001502"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSLLESDR"	"[R].iDSLLESDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"0"	"2"	"2"	"0.6531"	"0.0000"	"1"	"1"	"1"	"638.85046"	"1276.69365"	"1276.69461"	"-0.75"	"-0.00048"	"8/76"	"8"	"76"	"1280660.33978271"	"HCD"	"MS2"	"3.121796"	"58.2"	"100.000"	"80.6022"	"27724"	"27724"	"27705"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"97.6"	""	"77.2"	""	"65.0"	""	"99.7"	""	"113.8"	"102.1"	""	"849"	"49"	"36.000"	"29.000"	"0.000546861934693735"	""	"0"	"0.0002573"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSLLESDR"	"[R].iDSLLESDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"638.85132"	"1276.69536"	"1276.69461"	"0.59"	"0.00037"	"8/76"	"8"	"76"	"445453.386962891"	"HCD"	"MS2"	"0"	"25.5"	"100.000"	"80.3262"	"27615"	"27615"	"27594"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.2"	""	"28.2"	""	"29.1"	""	"47.6"	""	"49.7"	"49.1"	""	"806"	"37"	"36.000"	"29.000"	"0.00895993885932516"	""	"0.0001301"	"0.004748"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSLLESDR"	"[R].iDSLLESDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"0"	"2"	"2"	"0.6098"	"0.0000"	"1"	"1"	"1"	"638.85193"	"1276.69658"	"1276.69461"	"1.54"	"0.00098"	"9/76"	"9"	"76"	"482883.792907715"	"HCD"	"MS2"	"0"	"24.8"	"100.000"	"80.3118"	"27606"	"27606"	"27581"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.5"	""	"25.8"	""	"24.2"	""	"47.7"	""	"49.2"	"48.3"	""	"831"	"41"	"36.000"	"29.000"	"0.00339289975299495"	""	"0.0006732"	"0.008823"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSSDVEK"	"[R].gPSSDVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"638.85944"	"1276.71160"	"1276.71490"	"-2.59"	"-0.00165"	"6/64"	"6"	"64"	"1381315.98962402"	"HCD"	"MS2"	"0"	"115.0"	"100.000"	"31.9572"	"8009"	"8009"	"7992"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"181.7"	""	"125.0"	""	"132.9"	""	"207.0"	""	"223.8"	"222.0"	""	"905"	"31"	"36.000"	"29.000"	"0.0337768063180555"	"27"	"0.004942"	"0.05507"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSSDVEK"	"[R].gPSSDVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"638.86011"	"1276.71294"	"1276.71490"	"-1.54"	"-0.00098"	"6/64"	"6"	"64"	"1214429.26379395"	"HCD"	"MS2"	"100"	"103.0"	"100.000"	"31.9647"	"8004"	"8004"	"7977"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"157.8"	""	"124.7"	""	"140.1"	""	"187.0"	""	"176.4"	"190.3"	""	"924"	"15"	"36.000"	"29.000"	"1.55468345051477"	"18"	"0.005829"	"0.06483"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADENK"	"[K].eLADENk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"638.86035"	"1276.71343"	"1276.71490"	"-1.16"	"-0.00074"	"5/58"	"5"	"58"	"8934502.20562744"	"HCD"	"MS2"	"0"	"689.2"	"100.000"	"36.5669"	"9876"	"9876"	"9864"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"917.6"	""	"609.5"	""	"655.4"	""	"1304.4"	""	"1499.2"	"1571.9"	""	"924"	"29"	"36.000"	"29.000"	"0.0581623540248905"	""	"0.007808"	"0.09545"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSSDVEK"	"[R].gPSSDVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"638.86108"	"1276.71489"	"1276.71490"	"-0.01"	"-0.00001"	"5/64"	"5"	"64"	"1050557.21209717"	"HCD"	"MS2"	"0"	"94.6"	"100.000"	"32.2883"	"8136"	"8136"	"8114"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"124.1"	""	"102.4"	""	"117.2"	""	"173.5"	""	"204.4"	"183.6"	""	"900"	"32"	"36.000"	"29.000"	"0.0316382543947725"	"26"	"0.003581"	"0.03735"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADENK"	"[K].eLADENk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"638.86133"	"1276.71538"	"1276.71490"	"0.37"	"0.00024"	"5/58"	"5"	"58"	"6506646.38598633"	"HCD"	"MS2"	"0.6516584"	"512.8"	"100.000"	"36.7794"	"9957"	"9957"	"9940"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"694.1"	""	"435.5"	""	"486.5"	""	"945.1"	"0.7"	"1169.1"	"1146.7"	""	"885"	"32"	"36.000"	"29.000"	"0.0276638916553241"	""	"0.005119"	"0.05779"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSSDVEK"	"[R].gPSSDVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.3200"	"0.0000"	"1"	"1"	"1"	"638.86163"	"1276.71599"	"1276.71490"	"0.85"	"0.00054"	"10/64"	"10"	"64"	"921294.443908691"	"HCD"	"MS2"	"0"	"81.3"	"100.000"	"32.2693"	"8135"	"8135"	"8119"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.6"	""	"90.0"	""	"101.2"	""	"157.5"	"0.8"	"163.5"	"152.5"	""	"894"	"25"	"36.000"	"29.000"	"0.156425489661676"	""	"0.004938"	"0.05255"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADENK"	"[K].eLADENk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"638.86200"	"1276.71672"	"1276.71490"	"1.43"	"0.00091"	"5/58"	"5"	"58"	"3261618.41247559"	"HCD"	"MS2"	"0"	"282.1"	"100.000"	"36.4966"	"9841"	"9841"	"9819"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"421.8"	""	"263.1"	""	"268.8"	""	"558.6"	""	"584.6"	"589.9"	""	"915"	"32"	"36.000"	"29.000"	"0.0307178700213623"	"29"	"0.005067"	"0.05725"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASIVEDK"	"[R].gASIVEDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"638.87793"	"1276.74858"	"1276.75129"	"-2.12"	"-0.00135"	"7/64"	"7"	"64"	"2127291.83752441"	"HCD"	"MS2"	"45.11195"	"158.7"	"100.000"	"46.5495"	"13921"	"13921"	"13898"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"182.4"	""	"176.0"	""	"188.1"	""	"295.1"	""	"349.3"	"321.2"	""	"864"	"34"	"36.000"	"29.000"	"0.0173973758828598"	""	"0.0002479"	"0.005332"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASIVEDK"	"[R].gASIVEDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"638.87830"	"1276.74932"	"1276.75129"	"-1.55"	"-0.00099"	"7/64"	"7"	"64"	"2591592.43280029"	"HCD"	"MS2"	"35.24674"	"185.9"	"100.000"	"46.3634"	"13857"	"13857"	"13833"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"207.9"	""	"204.8"	""	"223.6"	""	"350.7"	""	"394.9"	"386.7"	""	"865"	"34"	"36.000"	"29.000"	"0.0162924393060541"	""	"0.0006732"	"0.008572"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASIVEDK"	"[R].gASIVEDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"638.87836"	"1276.74944"	"1276.75129"	"-1.45"	"-0.00093"	"7/64"	"7"	"64"	"14232053.2149658"	"HCD"	"MS2"	"0"	"736.8"	"74.270"	"46.6524"	"13973"	"13973"	"13959"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"900.9"	""	"856.6"	""	"941.4"	""	"1233.5"	""	"1526.6"	"1543.0"	""	"865"	"49"	"36.000"	"29.000"	"0.000495434347175195"	"29"	"0.0003538"	"0.007038"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEAASIK"	"[R].eAEAASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.2432"	"0.0000"	"1"	"1"	"1"	"426.25488"	"1276.75010"	"1276.75129"	"-0.93"	"-0.00040"	"6/66"	"6"	"66"	"1973254.39831543"	"HCD"	"MS2"	"6.630048"	"91.2"	"100.000"	"40.5147"	"11480"	"11480"	"11459"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"118.0"	""	"119.1"	""	"128.5"	""	"141.8"	"2.4"	"169.0"	"185.9"	""	"825"	"37"	"36.000"	"29.000"	"0.00848054870843458"	""	"0.0008629"	"0.009527"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEAASIK"	"[R].eAEAASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.2308"	"0.0000"	"1"	"1"	"1"	"426.25497"	"1276.75037"	"1276.75129"	"-0.72"	"-0.00031"	"6/66"	"6"	"66"	"4951661.12011719"	"HCD"	"MS2"	"11.40342"	"219.7"	"100.000"	"40.4210"	"11433"	"11433"	"11410"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"348.6"	"10.3"	"299.2"	""	"269.0"	""	"376.5"	""	"384.2"	"392.9"	""	"825"	"39"	"36.000"	"29.000"	"0.00491387328311291"	""	"0.0006732"	"0.008702"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTTVTPDK"	"[K].gTTVTPDk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JMB5"	"Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus OX=10116 GN=Adrm1 PE=1 SV=2"	"Q9JMB5"	"Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus OX=10116 GN=Adrm1 PE=1 SV=2"	"0"	"2"	"2"	"0.5161"	"0.0000"	"1"	"1"	"1"	"638.87885"	"1276.75041"	"1276.75129"	"-0.68"	"-0.00044"	"12/66"	"12"	"66"	"1568665.75036621"	"HCD"	"MS2"	"9.193639"	"114.9"	"100.000"	"34.4675"	"9024"	"9024"	"8999"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"154.0"	""	"134.5"	""	"155.0"	""	"204.7"	""	"214.9"	"226.6"	""	"825"	"31"	"36.000"	"29.000"	"0.0300901222980009"	"29"	"0.001812"	"0.02038"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASIVEDK"	"[R].gASIVEDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"638.87897"	"1276.75066"	"1276.75129"	"-0.49"	"-0.00031"	"11/64"	"11"	"64"	"2983446.0690918"	"HCD"	"MS2"	"28.49174"	"171.0"	"100.000"	"46.9579"	"14097"	"14097"	"14078"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"196.6"	""	"194.4"	""	"202.3"	""	"314.1"	""	"347.5"	"371.2"	""	"821"	"19"	"36.000"	"29.000"	"0.47131706162447"	"20"	"0.002937"	"0.02753"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASIVEDK"	"[R].gASIVEDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"638.87897"	"1276.75066"	"1276.75129"	"-0.49"	"-0.00031"	"7/64"	"7"	"64"	"11364234.6298218"	"HCD"	"MS2"	"0"	"816.6"	"100.000"	"46.8221"	"14030"	"14030"	"14018"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"959.3"	""	"972.8"	""	"1014.7"	""	"1433.8"	""	"1669.7"	"1708.8"	""	"821"	"50"	"36.000"	"29.000"	"0.000460588575490956"	"29"	"0"	"0.003034"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEAASIK"	"[R].eAEAASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"638.87903"	"1276.75078"	"1276.75129"	"-0.40"	"-0.00025"	"7/66"	"7"	"66"	"7913858.25299072"	"HCD"	"MS2"	"9.023154"	"463.8"	"85.496"	"40.4686"	"11461"	"11461"	"11445"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"744.3"	""	"549.5"	""	"583.4"	""	"747.3"	""	"855.4"	"920.6"	""	"821"	"45"	"36.000"	"29.000"	"0.00123969018122503"	""	"0.0002479"	"0.005465"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEAASIK"	"[R].eAEAASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.2766"	"0.0000"	"1"	"1"	"1"	"638.87909"	"1276.75090"	"1276.75129"	"-0.30"	"-0.00019"	"7/66"	"7"	"66"	"8000298.015625"	"HCD"	"MS2"	"8.07853"	"507.2"	"87.876"	"40.6579"	"11529"	"11529"	"11512"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"742.2"	""	"623.8"	""	"643.4"	""	"826.4"	""	"932.6"	"1045.2"	""	"821"	"47"	"36.000"	"29.000"	"0.000849793023678721"	""	"0.0002479"	"0.005205"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTTVTPDK"	"[K].gTTVTPDk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JMB5"	"Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus OX=10116 GN=Adrm1 PE=1 SV=2"	"Q9JMB5"	"Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus OX=10116 GN=Adrm1 PE=1 SV=2"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"638.87927"	"1276.75127"	"1276.75129"	"-0.02"	"-0.00001"	"6/66"	"6"	"66"	"1278173.4755249"	"HCD"	"MS2"	"24.24865"	"90.2"	"100.000"	"34.5584"	"9055"	"9055"	"9028"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"117.4"	""	"110.8"	""	"111.8"	""	"152.4"	"0.1"	"176.7"	"187.0"	""	"821"	"29"	"36.000"	"29.000"	"0.0574530595916059"	"29"	"0.001374"	"0.01749"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEAASIK"	"[R].eAEAASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"426.25531"	"1276.75138"	"1276.75129"	"0.07"	"0.00003"	"6/66"	"6"	"66"	"4969437.81109619"	"HCD"	"MS2"	"14.10581"	"208.6"	"100.000"	"40.2203"	"11360"	"11360"	"11336"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"329.4"	"7.2"	"289.0"	""	"272.8"	""	"348.8"	""	"365.6"	"362.6"	""	"820"	"40"	"36.000"	"29.000"	"0.00434294027322689"	""	"0.0001301"	"0.004205"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEAASIK"	"[R].eAEAASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"638.87946"	"1276.75163"	"1276.75129"	"0.27"	"0.00017"	"12/66"	"12"	"66"	"7906550.37646484"	"HCD"	"MS2"	"0"	"546.5"	"100.000"	"40.1724"	"11340"	"11340"	"11320"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"894.0"	""	"721.1"	""	"681.8"	""	"916.2"	"0.5"	"979.1"	"982.0"	""	"784"	"40"	"35.000"	"28.000"	"0.00428830895578661"	""	"0.0003538"	"0.006332"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASIVEDK"	"[R].gASIVEDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"638.87958"	"1276.75188"	"1276.75129"	"0.46"	"0.00030"	"7/64"	"7"	"64"	"4133711.11572266"	"HCD"	"MS2"	"1.616669"	"303.7"	"100.000"	"47.1114"	"14148"	"14148"	"14129"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"341.8"	""	"327.3"	""	"379.4"	""	"524.7"	""	"645.8"	"672.2"	""	"780"	"49"	"35.000"	"28.000"	"0.000514120128036999"	""	"0.0001301"	"0.004396"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEAASIK"	"[R].eAEAASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.2927"	"0.0000"	"1"	"1"	"1"	"638.87988"	"1276.75249"	"1276.75129"	"0.94"	"0.00060"	"12/66"	"12"	"66"	"8112855.71875"	"HCD"	"MS2"	"2.953773"	"559.0"	"100.000"	"40.3753"	"11414"	"11414"	"11397"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"890.4"	""	"754.2"	""	"700.9"	""	"922.3"	""	"1004.0"	"1022.4"	""	"788"	"41"	"35.000"	"28.000"	"0.00290065596412926"	""	"0.0002479"	"0.005976"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTTSDQLR"	"[R].dLTTSDQLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z173"	"Adhesion G protein-coupled receptor L3 OS=Rattus norvegicus OX=10116 GN=Adgrl3 PE=1 SV=1"	"Q9Z173"	"Adhesion G protein-coupled receptor L3 OS=Rattus norvegicus OX=10116 GN=Adgrl3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"639.35425"	"1277.70122"	"1277.68986"	"8.89"	"0.00568"	"7/78"	"7"	"78"	"1668687.90179443"	"HCD"	"MS2"	"0"	"130.1"	"100.000"	"43.9055"	"12859"	"12859"	"12837"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"177.6"	""	"152.4"	""	"185.8"	""	"201.6"	"3.6"	"254.8"	"258.3"	""	"876"	"16"	"36.000"	"29.000"	"1.21192044069024"	"14"	"0.009302"	"0.1208"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTTSDQLR"	"[R].dLTTSDQLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z173"	"Adhesion G protein-coupled receptor L3 OS=Rattus norvegicus OX=10116 GN=Adgrl3 PE=1 SV=1"	"Q9Z173"	"Adhesion G protein-coupled receptor L3 OS=Rattus norvegicus OX=10116 GN=Adgrl3 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"639.35510"	"1277.70293"	"1277.68986"	"10.23"	"0.00653"	"7/78"	"7"	"78"	"1429401.19909668"	"HCD"	"MS2"	"10.14844"	"107.3"	"100.000"	"44.0645"	"12913"	"12913"	"12891"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"159.9"	""	"129.8"	""	"150.0"	""	"183.2"	"1.7"	"186.1"	"205.5"	""	"861"	"17"	"36.000"	"29.000"	"0.963769450153671"	"16"	"0.008437"	"0.1022"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSDYPLIAR"	"[K].nSDYPLIAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3B7D5"	"Ras association domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Rassf2 PE=2 SV=1"	"Q3B7D5"	"Ras association domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Rassf2 PE=2 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"639.35577"	"1277.70427"	"1277.70512"	"-0.66"	"-0.00042"	"6/82"	"6"	"82"	"619034.610961914"	"HCD"	"MS2"	"0"	"43.1"	"100.000"	"54.9818"	"17367"	"17367"	"17345"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.6"	""	"48.4"	""	"60.9"	""	"71.0"	"1.2"	"89.4"	"81.4"	""	"811"	"21"	"36.000"	"29.000"	"0.320620183653929"	"20"	"0.007935"	"0.09715"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGTGSSGPK"	"[K].eGTGSSGPk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q68FR2"	"Bridging integrator 2 OS=Rattus norvegicus OX=10116 GN=Bin2 PE=1 SV=1"	"Q68FR2"	"Bridging integrator 2 OS=Rattus norvegicus OX=10116 GN=Bin2 PE=1 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"639.35760"	"1277.70793"	"1277.71015"	"-1.74"	"-0.00111"	"12/74"	"12"	"74"	"246854.286376953"	"HCD"	"MS2"	"0"	"22.3"	"100.000"	"23.3284"	"4506"	"4506"	"4479"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.0"	""	"19.9"	""	"23.2"	""	"48.7"	"1.4"	"53.3"	"36.6"	""	"820"	"26"	"36.000"	"29.000"	"0.115287934046357"	"21"	"0.006254"	"0.07099"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAGQEAK"	"[R].tDAGQEAk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"639.35797"	"1277.70867"	"1277.71015"	"-1.16"	"-0.00074"	"7/72"	"7"	"72"	"5073881.65863037"	"HCD"	"MS2"	"0"	"371.4"	"100.000"	"24.8439"	"5112"	"5112"	"5089"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"948.5"	""	"462.2"	""	"325.0"	""	"638.1"	""	"561.7"	"574.1"	""	"856"	"32"	"36.000"	"29.000"	"0.0266958509586476"	"25"	"0.000936"	"0.0127"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAGQEAK"	"[R].tDAGQEAk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"639.35809"	"1277.70891"	"1277.71015"	"-0.97"	"-0.00062"	"7/72"	"7"	"72"	"2596080.58563232"	"HCD"	"MS2"	"3.409963"	"192.6"	"100.000"	"25.1534"	"5236"	"5236"	"5219"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"452.0"	""	"232.2"	""	"199.0"	""	"312.4"	""	"304.6"	"321.3"	""	"819"	"33"	"36.000"	"29.000"	"0.022451941713509"	"29"	"0.0005778"	"0.008092"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAGQEAK"	"[R].tDAGQEAk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"639.35840"	"1277.70952"	"1277.71015"	"-0.49"	"-0.00032"	"7/72"	"7"	"72"	"5716805.52844238"	"HCD"	"MS2"	"0"	"426.6"	"100.000"	"25.0041"	"5191"	"5191"	"5180"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"985.5"	""	"527.8"	""	"404.2"	""	"708.6"	""	"714.5"	"695.0"	""	"819"	"32"	"36.000"	"29.000"	"0.0245614445726631"	"25"	"0.0008629"	"0.01113"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAGQEAK"	"[R].tDAGQEAk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"639.35858"	"1277.70989"	"1277.71015"	"-0.21"	"-0.00013"	"7/72"	"7"	"72"	"3415713.24060059"	"HCD"	"MS2"	"0"	"263.5"	"100.000"	"24.7356"	"5084"	"5084"	"5055"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"667.5"	""	"363.8"	""	"222.2"	""	"455.9"	""	"396.5"	"380.2"	""	"863"	"30"	"36.000"	"29.000"	"0.0404558005988517"	"24"	"0.0008629"	"0.01046"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITEEEK"	"[R].aITEEEk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"639.37054"	"1277.73381"	"1277.73530"	"-1.17"	"-0.00075"	"12/54"	"12"	"54"	"6114072.01971436"	"HCD"	"MS2"	"0"	"465.7"	"100.000"	"38.2891"	"10572"	"10572"	"10552"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"786.7"	""	"666.5"	""	"713.7"	""	"858.0"	"8.5"	"739.5"	"625.3"	""	"834"	"35"	"36.000"	"29.000"	"0.0143263664274248"	"24"	"0.005254"	"0.05942"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DIEDSIK"	"[K].dIEDSIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"426.58282"	"1277.73392"	"1277.73530"	"-1.08"	"-0.00046"	"5/56"	"5"	"56"	"3177399.63238525"	"HCD"	"MS2"	"2.697978"	"161.1"	"100.000"	"59.1958"	"19071"	"19071"	"19048"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"213.7"	"3.8"	"163.9"	""	"192.1"	""	"300.1"	"2.0"	"329.7"	"324.0"	""	"834"	"27"	"36.000"	"29.000"	"0.0873244894089822"	""	"0.005617"	"0.06447"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLQDSIK"	"[R].nLqDSIk.[R]"	"N-Term(TMT6plex); N1(Deamidated); Q3(Deamidated); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"426.58282"	"1277.73392"	"1277.73530"	"-1.08"	"-0.00046"	"5/62"	"5"	"62"	"3177399.63238525"	"HCD"	"MS2"	"2.697978"	"161.1"	"100.000"	"59.1958"	"19071"	"19071"	"19048"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"213.7"	"3.8"	"163.9"	""	"192.1"	""	"300.1"	"2.0"	"329.7"	"324.0"	""	"834"	"27"	"36.000"	"29.000"	"0.0873244894089822"	""	"0.005617"	"0.06447"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DIEDSIK"	"[K].dIEDSIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"426.58286"	"1277.73401"	"1277.73530"	"-1.01"	"-0.00043"	"5/56"	"5"	"56"	"2410748.19177246"	"HCD"	"MS2"	"9.21935"	"125.3"	"100.000"	"59.3047"	"19130"	"19130"	"19110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"163.6"	"2.9"	"117.1"	""	"150.2"	""	"223.1"	"2.6"	"263.8"	"267.5"	""	"767"	"28"	"35.000"	"28.000"	"0.057512913441516"	""	"0.002711"	"0.02605"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLQDSIK"	"[R].nLqDSIk.[R]"	"N-Term(TMT6plex); N1(Deamidated); Q3(Deamidated); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"426.58286"	"1277.73401"	"1277.73530"	"-1.01"	"-0.00043"	"5/62"	"5"	"62"	"2410748.19177246"	"HCD"	"MS2"	"9.21935"	"125.3"	"100.000"	"59.3047"	"19130"	"19130"	"19110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"163.6"	"2.9"	"117.1"	""	"150.2"	""	"223.1"	"2.6"	"263.8"	"267.5"	""	"767"	"28"	"35.000"	"28.000"	"0.057512913441516"	""	"0.002711"	"0.02606"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DIEDSIK"	"[K].dIEDSIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"4"	"639.37085"	"1277.73442"	"1277.73530"	"-0.69"	"-0.00044"	"7/56"	"7"	"56"	"1259921.8581543"	"HCD"	"MS2"	"100"	"111.2"	"100.000"	"59.6533"	"19270"	"19270"	"19259"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"159.3"	""	"127.4"	""	"127.0"	""	"174.0"	""	"243.1"	"233.3"	""	"764"	"1"	"35.000"	"28.000"	"32.8143165215062"	"13"	"0.009239"	"0.1206"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLQDSIK"	"[R].nLqDSIk.[R]"	"N-Term(TMT6plex); N1(Deamidated); Q3(Deamidated); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"3"	"3"	"5"	"639.37085"	"1277.73442"	"1277.73530"	"-0.69"	"-0.00044"	"7/62"	"7"	"62"	"1259921.8581543"	"HCD"	"MS2"	"100"	"111.2"	"100.000"	"59.6533"	"19270"	"19270"	"19259"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"159.3"	""	"127.4"	""	"127.0"	""	"174.0"	""	"243.1"	"233.3"	""	"764"	"1"	"35.000"	"28.000"	"32.8143165215062"	"13"	"0.009239"	"0.1206"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DIEDSIK"	"[K].dIEDSIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"426.58304"	"1277.73456"	"1277.73530"	"-0.58"	"-0.00025"	"5/56"	"5"	"56"	"3026078.59197998"	"HCD"	"MS2"	"7.707195"	"154.3"	"100.000"	"59.4977"	"19194"	"19194"	"19174"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"191.8"	"6.4"	"159.3"	""	"178.8"	""	"270.0"	""	"326.0"	"338.4"	""	"764"	"28"	"35.000"	"28.000"	"0.0565019404280256"	""	"0.006685"	"0.07541"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLQDSIK"	"[R].nLqDSIk.[R]"	"N-Term(TMT6plex); N1(Deamidated); Q3(Deamidated); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"426.58304"	"1277.73456"	"1277.73530"	"-0.58"	"-0.00025"	"5/62"	"5"	"62"	"3026078.59197998"	"HCD"	"MS2"	"7.707195"	"154.3"	"100.000"	"59.4977"	"19194"	"19194"	"19174"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"191.8"	"6.4"	"159.3"	""	"178.8"	""	"270.0"	""	"326.0"	"338.4"	""	"764"	"28"	"35.000"	"28.000"	"0.0565019404280256"	""	"0.006685"	"0.07542"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DIEDSIK"	"[K].dIEDSIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"426.58310"	"1277.73474"	"1277.73530"	"-0.44"	"-0.00019"	"5/56"	"5"	"56"	"3420429.68334961"	"HCD"	"MS2"	"11.71657"	"173.6"	"100.000"	"58.9776"	"18997"	"18997"	"18975"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"224.5"	"7.8"	"181.7"	""	"196.4"	""	"312.3"	""	"364.4"	"366.3"	""	"769"	"30"	"35.000"	"28.000"	"0.0382733382971662"	""	"0.006254"	"0.07101"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLQDSIK"	"[R].nLqDSIk.[R]"	"N-Term(TMT6plex); N1(Deamidated); Q3(Deamidated); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"426.58310"	"1277.73474"	"1277.73530"	"-0.44"	"-0.00019"	"5/62"	"5"	"62"	"3420429.68334961"	"HCD"	"MS2"	"11.71657"	"173.6"	"100.000"	"58.9776"	"18997"	"18997"	"18975"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"224.5"	"7.8"	"181.7"	""	"196.4"	""	"312.3"	""	"364.4"	"366.3"	""	"769"	"30"	"35.000"	"28.000"	"0.0382733382971662"	""	"0.006254"	"0.07102"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DIEDSIK"	"[K].dIEDSIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"639.37103"	"1277.73479"	"1277.73530"	"-0.40"	"-0.00026"	"6/56"	"6"	"56"	"4482894.09747314"	"HCD"	"MS2"	"30.78233"	"341.7"	"100.000"	"59.1130"	"19037"	"19037"	"19016"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"486.5"	""	"382.9"	""	"396.7"	""	"613.2"	""	"679.7"	"686.3"	""	"769"	"32"	"35.000"	"28.000"	"0.0240933030966513"	""	"0.00344"	"0.03251"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLQDSIK"	"[R].nLqDSIk.[R]"	"N-Term(TMT6plex); N1(Deamidated); Q3(Deamidated); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"639.37103"	"1277.73479"	"1277.73530"	"-0.40"	"-0.00026"	"6/62"	"6"	"62"	"4482894.09747314"	"HCD"	"MS2"	"30.78233"	"341.7"	"100.000"	"59.1130"	"19037"	"19037"	"19016"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"486.5"	""	"382.9"	""	"396.7"	""	"613.2"	""	"679.7"	"686.3"	""	"769"	"32"	"35.000"	"28.000"	"0.0240933030966513"	""	"0.00344"	"0.03251"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DIEDSIK"	"[K].dIEDSIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"639.37103"	"1277.73479"	"1277.73530"	"-0.40"	"-0.00026"	"6/56"	"6"	"56"	"26036231.5244141"	"HCD"	"MS2"	"0"	"663.1"	"36.467"	"59.1939"	"19086"	"19086"	"19069"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"867.7"	""	"673.2"	""	"748.7"	""	"1156.7"	""	"1444.5"	"1410.7"	""	"769"	"35"	"35.000"	"28.000"	"0.0122714630528624"	""	"0.004942"	"0.05453"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLQDSIK"	"[R].nLqDSIk.[R]"	"N-Term(TMT6plex); N1(Deamidated); Q3(Deamidated); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"639.37103"	"1277.73479"	"1277.73530"	"-0.40"	"-0.00026"	"6/62"	"6"	"62"	"26036231.5244141"	"HCD"	"MS2"	"0"	"663.1"	"36.467"	"59.1939"	"19086"	"19086"	"19069"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"867.7"	""	"673.2"	""	"748.7"	""	"1156.7"	""	"1444.5"	"1410.7"	""	"769"	"35"	"35.000"	"28.000"	"0.0122714630528624"	""	"0.004942"	"0.05454"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DIEDSIK"	"[K].dIEDSIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"639.37109"	"1277.73491"	"1277.73530"	"-0.31"	"-0.00020"	"6/56"	"6"	"56"	"25426942.677002"	"HCD"	"MS2"	"0.1320278"	"819.6"	"42.502"	"59.4100"	"19159"	"19159"	"19142"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1096.4"	""	"811.0"	""	"943.0"	""	"1424.8"	""	"1748.8"	"1762.4"	""	"769"	"35"	"35.000"	"28.000"	"0.0126152640201994"	""	"0.004942"	"0.05581"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLQDSIK"	"[R].nLqDSIk.[R]"	"N-Term(TMT6plex); N1(Deamidated); Q3(Deamidated); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"639.37109"	"1277.73491"	"1277.73530"	"-0.31"	"-0.00020"	"6/62"	"6"	"62"	"25426942.677002"	"HCD"	"MS2"	"0.1320278"	"819.6"	"42.502"	"59.4100"	"19159"	"19159"	"19142"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1096.4"	""	"811.0"	""	"943.0"	""	"1424.8"	""	"1748.8"	"1762.4"	""	"769"	"35"	"35.000"	"28.000"	"0.0126152640201994"	""	"0.004942"	"0.05582"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DIEDSIK"	"[K].dIEDSIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"639.37152"	"1277.73577"	"1277.73530"	"0.36"	"0.00023"	"6/56"	"6"	"56"	"4809441.31329346"	"HCD"	"MS2"	"27.14226"	"348.0"	"100.000"	"58.8949"	"18963"	"18963"	"18943"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"488.6"	""	"384.1"	""	"376.3"	""	"660.5"	""	"734.2"	"661.3"	""	"734"	"33"	"35.000"	"28.000"	"0.0167365548154126"	""	"0.002973"	"0.0294"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLQDSIK"	"[R].nLqDSIk.[R]"	"N-Term(TMT6plex); N1(Deamidated); Q3(Deamidated); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"639.37152"	"1277.73577"	"1277.73530"	"0.36"	"0.00023"	"6/62"	"6"	"62"	"4809441.31329346"	"HCD"	"MS2"	"27.14226"	"348.0"	"100.000"	"58.8949"	"18963"	"18963"	"18943"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"488.6"	""	"384.1"	""	"376.3"	""	"660.5"	""	"734.2"	"661.3"	""	"734"	"33"	"35.000"	"28.000"	"0.0167365548154126"	""	"0.002973"	"0.0294"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEASAVSK"	"[K].gAEASAVSk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EPH2"	"MARCKS-related protein OS=Rattus norvegicus OX=10116 GN=Marcksl1 PE=2 SV=3"	"Q9EPH2"	"MARCKS-related protein OS=Rattus norvegicus OX=10116 GN=Marcksl1 PE=2 SV=3"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"639.37457"	"1277.74187"	"1277.74654"	"-3.65"	"-0.00233"	"7/74"	"7"	"74"	"726932.301269531"	"HCD"	"MS2"	"0"	"64.4"	"100.000"	"32.4048"	"8190"	"8190"	"8164"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.3"	""	"56.0"	""	"79.2"	""	"119.0"	""	"145.2"	"142.5"	""	"741"	"21"	"35.000"	"28.000"	"0.284962828126189"	"16"	"0.0004639"	"0.00775"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEASAVSK"	"[K].gAEASAVSk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EPH2"	"MARCKS-related protein OS=Rattus norvegicus OX=10116 GN=Marcksl1 PE=2 SV=3"	"Q9EPH2"	"MARCKS-related protein OS=Rattus norvegicus OX=10116 GN=Marcksl1 PE=2 SV=3"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"639.37616"	"1277.74504"	"1277.74654"	"-1.17"	"-0.00075"	"8/74"	"8"	"74"	"985941.274291992"	"HCD"	"MS2"	"13.97205"	"81.4"	"100.000"	"32.4305"	"8194"	"8194"	"8170"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"95.4"	""	"83.4"	""	"91.2"	""	"159.9"	""	"187.0"	"162.6"	""	"736"	"43"	"35.000"	"28.000"	"0.00189168063782333"	"26"	"0"	"0.0002508"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGNLETK"	"[K].aSGNLETk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"639.37695"	"1277.74663"	"1277.74654"	"0.07"	"0.00005"	"7/74"	"7"	"74"	"3037208.0668335"	"HCD"	"MS2"	"38.7834"	"257.0"	"100.000"	"34.0526"	"8849"	"8849"	"8825"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"274.1"	""	"286.3"	""	"306.8"	""	"465.9"	""	"543.3"	"575.3"	""	"706"	"25"	"35.000"	"28.000"	"0.125249126399452"	"23"	"0.000936"	"0.01143"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMNGESLDGR"	"[R].aMNGESLDGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q925G0"	"RNA-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Rbm3 PE=1 SV=2"	"Q925G0"	"RNA-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Rbm3 PE=1 SV=2"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"639.81915"	"1278.63103"	"1278.63097"	"0.05"	"0.00003"	"8/92"	"8"	"92"	"1027058.50012207"	"HCD"	"MS2"	"25.04175"	"80.5"	"100.000"	"36.1043"	"9683"	"9683"	"9669"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"129.8"	""	"100.7"	""	"116.6"	""	"108.8"	""	"152.8"	"160.0"	""	"509"	"49"	"34.000"	"27.000"	"0.00032560254190809"	"18"	"0"	"0.0001252"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMNGESLDGR"	"[R].aMNGESLDGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q925G0"	"RNA-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Rbm3 PE=1 SV=2"	"Q925G0"	"RNA-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Rbm3 PE=1 SV=2"	"0"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"639.81958"	"1278.63188"	"1278.63097"	"0.72"	"0.00046"	"8/92"	"8"	"92"	"1114968.7276001"	"HCD"	"MS2"	"0"	"81.4"	"100.000"	"36.0087"	"9650"	"9650"	"9625"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"134.1"	""	"109.5"	""	"110.6"	""	"97.1"	""	"170.8"	"155.1"	""	"503"	"47"	"34.000"	"27.000"	"0.00048477251566752"	"19"	"0"	"0.0006383"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVEELFER"	"[K].qVEELFER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2Y1"	"General transcription factor II-I OS=Rattus norvegicus OX=10116 GN=Gtf2i PE=1 SV=2"	"Q5U2Y1"	"General transcription factor II-I OS=Rattus norvegicus OX=10116 GN=Gtf2i PE=1 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"639.84766"	"1278.68804"	"1278.68913"	"-0.86"	"-0.00055"	"6/78"	"6"	"78"	"336975.87890625"	"HCD"	"MS2"	"7.80618"	"21.4"	"100.000"	"72.9529"	"24632"	"24632"	"24607"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.3"	""	"24.1"	""	"23.1"	""	"44.4"	""	"37.9"	"45.0"	""	"888"	"31"	"36.000"	"29.000"	"0.033758486696144"	"21"	"0.0023"	"0.02303"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVEELFER"	"[K].qVEELFER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2Y1"	"General transcription factor II-I OS=Rattus norvegicus OX=10116 GN=Gtf2i PE=1 SV=2"	"Q5U2Y1"	"General transcription factor II-I OS=Rattus norvegicus OX=10116 GN=Gtf2i PE=1 SV=2"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"639.84821"	"1278.68913"	"1278.68913"	"0.00"	"0.00000"	"6/78"	"6"	"78"	"282673.084228516"	"HCD"	"MS2"	"9.241009"	"20.5"	"100.000"	"72.8846"	"24618"	"24618"	"24593"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.4"	"2.1"	"22.7"	""	"26.6"	""	"35.4"	""	"37.9"	"40.1"	""	"871"	"35"	"36.000"	"29.000"	"0.0141249903355642"	"24"	"0.0006732"	"0.008889"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDPSSADK"	"[K].tDPSSADk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97576"	"GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Grpel1 PE=1 SV=2"	"P97576"	"GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Grpel1 PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"639.85052"	"1278.69377"	"1278.69417"	"-0.31"	"-0.00020"	"7/68"	"7"	"68"	"1539540.75219727"	"HCD"	"MS2"	"17.24116"	"124.0"	"100.000"	"27.1198"	"6049"	"6049"	"6030"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"142.8"	""	"108.2"	""	"171.0"	""	"222.7"	""	"256.3"	"281.9"	""	"846"	"29"	"36.000"	"29.000"	"0.0508557855843166"	"23"	"0.00912"	"0.1183"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVMEEAK"	"[R].nVMEEAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"639.85797"	"1278.70867"	"1278.71279"	"-3.23"	"-0.00206"	"6/62"	"6"	"62"	"2114131.27490234"	"HCD"	"MS2"	"14.91001"	"183.4"	"100.000"	"43.6579"	"12759"	"12759"	"12741"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"326.8"	""	"240.0"	""	"256.4"	""	"207.1"	""	"349.8"	"362.8"	""	"818"	"30"	"36.000"	"29.000"	"0.0387903151490067"	"25"	"0.005183"	"0.05873"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVMEEAK"	"[R].nVMEEAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"639.85913"	"1278.71099"	"1278.71279"	"-1.41"	"-0.00090"	"6/62"	"6"	"62"	"1583181.12805176"	"HCD"	"MS2"	"0"	"137.3"	"100.000"	"43.7481"	"12786"	"12786"	"12768"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"236.6"	""	"196.3"	""	"190.4"	""	"150.6"	""	"270.3"	"259.5"	""	"792"	"30"	"35.000"	"28.000"	"0.0379048852232758"	"25"	"0.003967"	"0.04217"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDELSK"	"[K].aASDELSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"639.86823"	"1278.72917"	"1278.73055"	"-1.08"	"-0.00069"	"12/64"	"12"	"64"	"6542688.47454834"	"HCD"	"MS2"	"0"	"479.6"	"100.000"	"39.5056"	"11068"	"11068"	"11052"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"654.2"	""	"504.4"	""	"476.7"	""	"968.0"	""	"939.5"	"1013.5"	""	"808"	"42"	"36.000"	"29.000"	"0.00263257871200581"	"24"	"0.0001301"	"0.004909"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDELSK"	"[K].aASDELSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"639.86841"	"1278.72954"	"1278.73055"	"-0.79"	"-0.00051"	"12/64"	"12"	"64"	"5180706.75970459"	"HCD"	"MS2"	"0"	"399.6"	"100.000"	"39.6993"	"11138"	"11138"	"11117"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"561.7"	""	"435.6"	""	"403.9"	""	"794.4"	""	"798.9"	"802.3"	""	"770"	"41"	"35.000"	"28.000"	"0.00273817202756532"	"24"	"0.0002479"	"0.005939"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDELSK"	"[K].aASDELSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"639.86853"	"1278.72978"	"1278.73055"	"-0.60"	"-0.00038"	"12/64"	"12"	"64"	"16981455.9227295"	"HCD"	"MS2"	"0"	"625.5"	"53.642"	"39.9912"	"11258"	"11258"	"11241"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"772.4"	""	"589.0"	""	"675.0"	""	"1187.5"	""	"1304.4"	"1417.7"	""	"770"	"42"	"35.000"	"28.000"	"0.00257905574625362"	"28"	"0.0003538"	"0.006095"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDELSK"	"[K].aASDELSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"639.86884"	"1278.73039"	"1278.73055"	"-0.12"	"-0.00008"	"12/64"	"12"	"64"	"14238641.927124"	"HCD"	"MS2"	"0"	"569.8"	"55.116"	"39.7997"	"11189"	"11189"	"11172"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"705.6"	""	"532.3"	""	"582.3"	""	"1107.3"	"3.6"	"1170.8"	"1313.9"	""	"771"	"42"	"35.000"	"28.000"	"0.00260030554677549"	"28"	"0.0003538"	"0.006899"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYFEEYGK"	"[R].DYFEEYGk.[I]"	"K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.0952"	"0.0000"	"1"	"1"	"1"	"640.30524"	"1279.60320"	"1279.60440"	"-0.94"	"-0.00060"	"6/64"	"6"	"64"	"490313.101989746"	"HCD"	"MS2"	"8.548366"	"26.7"	"100.000"	"69.0657"	"23062"	"23062"	"23038"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.9"	""	"24.7"	""	"26.6"	""	"50.0"	"0.4"	"60.3"	"60.6"	""	"306"	"42"	"31.000"	"24.000"	"0.000996991442913089"	""	"0.003967"	"0.0411"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYFEEYGK"	"[R].DYFEEYGk.[I]"	"K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.0952"	"0.0000"	"1"	"1"	"1"	"640.30548"	"1279.60369"	"1279.60440"	"-0.56"	"-0.00036"	"6/64"	"6"	"64"	"464034.760925293"	"HCD"	"MS2"	"15.06553"	"25.4"	"100.000"	"69.2747"	"23133"	"23133"	"23107"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.5"	""	"17.9"	""	"27.6"	""	"45.1"	""	"60.4"	"58.2"	""	"310"	"42"	"31.000"	"24.000"	"0.00099616596184138"	""	"0.003507"	"0.03609"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNMEDSIVR"	"[K].sNMEDSIVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"640.32904"	"1279.65080"	"1279.65137"	"-0.44"	"-0.00028"	"13/88"	"13"	"88"	"1167872.66619873"	"HCD"	"MS2"	"29.76513"	"84.0"	"100.000"	"43.3049"	"12617"	"12617"	"12591"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"104.5"	""	"101.9"	""	"91.3"	""	"164.4"	"0.4"	"167.2"	"167.7"	""	"640"	"14"	"35.000"	"28.000"	"1.3650544601651"	"16"	"0.0001301"	"0.004426"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ELEEDFIR"	"[K].eLEEDFIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"640.33850"	"1279.66973"	"1279.67315"	"-2.67"	"-0.00171"	"10/64"	"10"	"64"	"511261.073425293"	"HCD"	"MS2"	"0"	"28.2"	"100.000"	"75.8194"	"25800"	"25800"	"25777"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.8"	""	"33.7"	""	"41.7"	""	"51.0"	""	"49.5"	"47.3"	""	"752"	"26"	"35.000"	"28.000"	"0.0910306921572803"	""	"0.0008629"	"0.01008"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"QELEDFLR"	"[K].qELEDFLR.[Q]"	"N-Term(TMT6plex); Q1(Deamidated)"	"1"	"1"	"O35550"	"Rab GTPase-binding effector protein 1 OS=Rattus norvegicus OX=10116 GN=Rabep1 PE=1 SV=1"	"O35550"	"Rab GTPase-binding effector protein 1 OS=Rattus norvegicus OX=10116 GN=Rabep1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"640.33850"	"1279.66973"	"1279.67315"	"-2.67"	"-0.00171"	"10/76"	"10"	"76"	"511261.073425293"	"HCD"	"MS2"	"0"	"28.2"	"100.000"	"75.8194"	"25800"	"25800"	"25777"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.8"	""	"33.7"	""	"41.7"	""	"51.0"	""	"49.5"	"47.3"	""	"752"	"26"	"35.000"	"28.000"	"0.0910306921572803"	""	"0.008728"	"0.1124"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEDFIR"	"[K].eLEEDFIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"0.2326"	"0.0000"	"1"	"1"	"1"	"640.33972"	"1279.67217"	"1279.67315"	"-0.77"	"-0.00049"	"12/64"	"12"	"64"	"5280552.37731934"	"HCD"	"MS2"	"0"	"241.0"	"100.000"	"75.6405"	"25718"	"25718"	"25701"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"413.9"	""	"287.1"	""	"284.3"	""	"420.3"	""	"451.0"	"428.9"	""	"770"	"43"	"35.000"	"28.000"	"0.00178427064098471"	""	"0.0003538"	"0.006368"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEDFIR"	"[K].eLEEDFIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"1"	"640.33978"	"1279.67229"	"1279.67315"	"-0.67"	"-0.00043"	"11/64"	"11"	"64"	"1095571.46923828"	"HCD"	"MS2"	"0"	"62.6"	"100.000"	"75.2111"	"25554"	"25554"	"25534"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"108.5"	""	"79.3"	""	"78.1"	""	"110.9"	"2.1"	"103.5"	"110.2"	""	"772"	"36"	"35.000"	"28.000"	"0.00971823294114918"	""	"0"	"0.002916"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEDFIR"	"[K].eLEEDFIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"0.1163"	"0.0000"	"1"	"1"	"1"	"640.33984"	"1279.67241"	"1279.67315"	"-0.58"	"-0.00037"	"12/64"	"12"	"64"	"1187914.23626709"	"HCD"	"MS2"	"3.830318"	"64.5"	"100.000"	"75.3501"	"25599"	"25599"	"25579"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.1"	""	"74.7"	""	"72.2"	""	"113.2"	""	"113.0"	"112.3"	""	"772"	"43"	"35.000"	"28.000"	"0.00215073699087725"	""	"0"	"0.003665"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEDFIR"	"[K].eLEEDFIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"640.33990"	"1279.67253"	"1279.67315"	"-0.48"	"-0.00031"	"12/64"	"12"	"64"	"5349743.43939209"	"HCD"	"MS2"	"0"	"236.7"	"100.000"	"75.5172"	"25677"	"25677"	"25666"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"432.6"	""	"259.6"	""	"297.5"	""	"370.3"	""	"431.5"	"452.2"	""	"772"	"45"	"35.000"	"28.000"	"0.00115501414973076"	""	"0.0001301"	"0.004753"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ELEEDFIR"	"[K].eLEEDFIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"640.34015"	"1279.67302"	"1279.67315"	"-0.10"	"-0.00006"	"5/64"	"5"	"64"	"461968.40234375"	"HCD"	"MS2"	"0"	"25.5"	"100.000"	"75.9498"	"25843"	"25843"	"25823"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.5"	""	"32.0"	""	"35.9"	"2.0"	"43.3"	""	"53.3"	"46.2"	""	"772"	"29"	"35.000"	"28.000"	"0.044935264735245"	""	"0.0003538"	"0.006222"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"QELEDFLR"	"[K].qELEDFLR.[Q]"	"N-Term(TMT6plex); Q1(Deamidated)"	"1"	"1"	"O35550"	"Rab GTPase-binding effector protein 1 OS=Rattus norvegicus OX=10116 GN=Rabep1 PE=1 SV=1"	"O35550"	"Rab GTPase-binding effector protein 1 OS=Rattus norvegicus OX=10116 GN=Rabep1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"640.34015"	"1279.67302"	"1279.67315"	"-0.10"	"-0.00006"	"5/76"	"5"	"76"	"461968.40234375"	"HCD"	"MS2"	"0"	"25.5"	"100.000"	"75.9498"	"25843"	"25843"	"25823"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.5"	""	"32.0"	""	"35.9"	"2.0"	"43.3"	""	"53.3"	"46.2"	""	"772"	"29"	"35.000"	"28.000"	"0.044935264735245"	""	"0.006308"	"0.07205"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDNLQYR"	"[R].eLDNLQYR.[K]"	"N-Term(TMT6plex)"	"1"	"3"	"Q53UA7"	"Serine/threonine-protein kinase TAO3 OS=Rattus norvegicus OX=10116 GN=Taok3 PE=1 SV=1"	"Q9JLS3; Q53UA7; O88664"	"Serine/threonine-protein kinase TAO2 OS=Rattus norvegicus OX=10116 GN=Taok2 PE=1 SV=1; Serine/threonine-protein kinase TAO3 OS=Rattus norvegicus OX=10116 GN=Taok3 PE=1 SV=1; Serine/threonine-protein kinase TAO1 OS=Rattus norvegicus OX=10116 GN=Taok1 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"640.34491"	"1279.68254"	"1279.68438"	"-1.44"	"-0.00092"	"6/68"	"6"	"68"	"1097857.66888428"	"HCD"	"MS2"	"25.04203"	"69.7"	"100.000"	"55.1610"	"17440"	"17440"	"17416"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"112.4"	""	"87.5"	""	"87.9"	""	"118.1"	""	"135.1"	"123.7"	""	"760"	"30"	"35.000"	"28.000"	"0.0375650175969637"	"23"	"0.0001301"	"0.005008"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDNLQYR"	"[R].eLDNLQYR.[K]"	"N-Term(TMT6plex)"	"1"	"3"	"Q53UA7"	"Serine/threonine-protein kinase TAO3 OS=Rattus norvegicus OX=10116 GN=Taok3 PE=1 SV=1"	"Q9JLS3; Q53UA7; O88664"	"Serine/threonine-protein kinase TAO2 OS=Rattus norvegicus OX=10116 GN=Taok2 PE=1 SV=1; Serine/threonine-protein kinase TAO3 OS=Rattus norvegicus OX=10116 GN=Taok3 PE=1 SV=1; Serine/threonine-protein kinase TAO1 OS=Rattus norvegicus OX=10116 GN=Taok1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"640.34576"	"1279.68425"	"1279.68438"	"-0.10"	"-0.00006"	"6/68"	"6"	"68"	"1212956.27075195"	"HCD"	"MS2"	"15.49297"	"70.5"	"100.000"	"55.3933"	"17521"	"17521"	"17495"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"120.5"	""	"77.3"	""	"89.1"	""	"109.0"	""	"149.3"	"127.5"	""	"784"	"36"	"35.000"	"28.000"	"0.0104300422344113"	"19"	"0.0003538"	"0.006128"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNEESTK"	"[K].gGNEESTk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"640.34753"	"1279.68779"	"1279.68942"	"-1.27"	"-0.00081"	"7/72"	"7"	"72"	"3142242.56304932"	"HCD"	"MS2"	"0"	"264.3"	"100.000"	"21.3348"	"3712"	"3712"	"3688"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"348.6"	""	"218.1"	""	"240.6"	""	"647.4"	""	"514.3"	"542.0"	""	"798"	"48"	"36.000"	"29.000"	"0.000662175176067587"	""	"0.0001301"	"0.004241"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSADGNEK"	"[K].tSADGNEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"640.34784"	"1279.68840"	"1279.68942"	"-0.79"	"-0.00051"	"6/72"	"6"	"72"	"6610709.60040283"	"HCD"	"MS2"	"0"	"509.7"	"100.000"	"22.5943"	"4222"	"4222"	"4202"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"770.8"	""	"458.2"	""	"581.1"	""	"915.8"	""	"1043.7"	"1073.1"	""	"780"	"32"	"35.000"	"28.000"	"0.0238267389713173"	""	"0.000936"	"0.01165"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNEESTK"	"[K].gGNEESTk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"640.34814"	"1279.68901"	"1279.68942"	"-0.32"	"-0.00020"	"7/72"	"7"	"72"	"3091914.81066895"	"HCD"	"MS2"	"0"	"261.3"	"100.000"	"21.4108"	"3725"	"3725"	"3703"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"356.0"	""	"218.9"	""	"247.2"	""	"628.2"	""	"545.3"	"488.4"	""	"800"	"48"	"36.000"	"29.000"	"0.000680863403357981"	""	"0"	"0.002756"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSADGNEK"	"[K].tSADGNEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"640.34821"	"1279.68913"	"1279.68942"	"-0.22"	"-0.00014"	"6/72"	"6"	"72"	"3279850.05224609"	"HCD"	"MS2"	"0"	"267.0"	"100.000"	"22.6815"	"4241"	"4241"	"4219"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"401.5"	""	"256.8"	""	"299.2"	""	"491.7"	""	"556.2"	"532.2"	""	"800"	"34"	"36.000"	"29.000"	"0.0174606332896066"	""	"0.0002479"	"0.005792"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNNSYIQR"	"[R].gVNNSYIQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O54735"	"cGMP-specific 3',5'-cyclic phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Pde5a PE=2 SV=1"	"O54735"	"cGMP-specific 3',5'-cyclic phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Pde5a PE=2 SV=1"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"640.35120"	"1279.69512"	"1279.69561"	"-0.39"	"-0.00025"	"8/76"	"8"	"76"	"1644951.47711182"	"HCD"	"MS2"	"29.16389"	"119.1"	"100.000"	"35.0437"	"9252"	"9252"	"9227"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"200.1"	""	"167.8"	""	"160.8"	""	"177.1"	""	"197.7"	"231.5"	""	"765"	"31"	"35.000"	"28.000"	"0.0308767399070181"	"15"	"0"	"0.001879"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNNSYIQR"	"[R].gVNNSYIQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O54735"	"cGMP-specific 3',5'-cyclic phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Pde5a PE=2 SV=1"	"O54735"	"cGMP-specific 3',5'-cyclic phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Pde5a PE=2 SV=1"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"640.35138"	"1279.69548"	"1279.69561"	"-0.10"	"-0.00007"	"8/76"	"8"	"76"	"1775435.48339844"	"HCD"	"MS2"	"34.10838"	"126.4"	"100.000"	"34.9547"	"9221"	"9221"	"9194"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"222.3"	""	"167.3"	""	"170.8"	""	"183.1"	""	"229.9"	"223.7"	""	"848"	"39"	"36.000"	"29.000"	"0.00538723420608422"	"17"	"0"	"0.001594"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLEMEK"	"[K].dGLEMEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63029"	"Translationally-controlled tumor protein OS=Rattus norvegicus OX=10116 GN=Tpt1 PE=1 SV=1"	"P63029"	"Translationally-controlled tumor protein OS=Rattus norvegicus OX=10116 GN=Tpt1 PE=1 SV=1"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"640.35266"	"1279.69805"	"1279.69681"	"0.97"	"0.00062"	"6/58"	"6"	"58"	"2415096.67510986"	"HCD"	"MS2"	"8.096476"	"201.8"	"100.000"	"53.7817"	"16880"	"16880"	"16860"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"382.0"	"2.7"	"242.3"	""	"261.4"	""	"223.4"	""	"380.3"	"424.9"	""	"828"	"25"	"36.000"	"29.000"	"0.145211275816363"	"27"	"0.006443"	"0.07305"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLEMEK"	"[K].dGLEMEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63029"	"Translationally-controlled tumor protein OS=Rattus norvegicus OX=10116 GN=Tpt1 PE=1 SV=1"	"P63029"	"Translationally-controlled tumor protein OS=Rattus norvegicus OX=10116 GN=Tpt1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"640.35272"	"1279.69817"	"1279.69681"	"1.06"	"0.00068"	"6/58"	"6"	"58"	"2215717.04986572"	"HCD"	"MS2"	"18.52119"	"195.3"	"100.000"	"54.0236"	"16968"	"16968"	"16944"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"364.6"	""	"227.4"	""	"256.9"	""	"220.0"	""	"374.7"	"408.5"	""	"828"	"24"	"36.000"	"29.000"	"0.182389713491713"	"25"	"0.005119"	"0.05811"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLEMEK"	"[K].dGLEMEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63029"	"Translationally-controlled tumor protein OS=Rattus norvegicus OX=10116 GN=Tpt1 PE=1 SV=1"	"P63029"	"Translationally-controlled tumor protein OS=Rattus norvegicus OX=10116 GN=Tpt1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"640.35339"	"1279.69951"	"1279.69681"	"2.11"	"0.00135"	"10/58"	"10"	"58"	"688040.608337402"	"HCD"	"MS2"	"0"	"61.8"	"100.000"	"54.3372"	"17092"	"17092"	"17072"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.5"	""	"72.8"	""	"84.9"	""	"72.7"	"0.4"	"123.1"	"127.7"	""	"836"	"22"	"36.000"	"29.000"	"0.253032485647136"	"25"	"0.006308"	"0.07139"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMANQVK"	"[K].dmANQVk.[A]"	"N-Term(TMT6plex); M2(Oxidation); K7(TMT6plex)"	"1"	"1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"640.35730"	"1279.70732"	"1279.70804"	"-0.56"	"-0.00036"	"6/54"	"6"	"54"	"2373731.65942383"	"HCD"	"MS2"	"0"	"146.1"	"100.000"	"26.7350"	"5877"	"5877"	"5853"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"170.5"	""	"127.3"	""	"161.2"	""	"348.1"	"1.6"	"291.0"	"287.3"	""	"835"	"20"	"36.000"	"29.000"	"0.424283829273516"	"19"	"0.009239"	"0.1206"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TESTQQK"	"[K].tESTQQk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09650"	"Mast cell protease 1 OS=Rattus norvegicus OX=10116 GN=Mcpt1 PE=1 SV=3"	"P09650"	"Mast cell protease 1 OS=Rattus norvegicus OX=10116 GN=Mcpt1 PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"640.36597"	"1279.72466"	"1279.72580"	"-0.89"	"-0.00057"	"5/58"	"5"	"58"	"500986.883728027"	"HCD"	"MS2"	"0"	"43.6"	"100.000"	"21.8232"	"3909"	"3909"	"3895"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.9"	""	"31.3"	""	"40.9"	""	"65.2"	""	"93.6"	"116.9"	""	"769"	"16"	"35.000"	"28.000"	"0.963599007790847"	"20"	"0.005921"	"0.06814"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDMLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"640.36890"	"1279.73052"	"1279.73319"	"-2.09"	"-0.00134"	"12/54"	"12"	"54"	"2028260.92034912"	"HCD"	"MS2"	"0"	"157.0"	"100.000"	"62.2879"	"20308"	"20308"	"20295"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"211.0"	""	"205.2"	""	"229.1"	""	"225.5"	""	"296.8"	"324.3"	""	"769"	"37"	"35.000"	"28.000"	"0.00712682909202994"	"28"	"0.003922"	"0.03957"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVDQPLSVR"	"[R].hVDQPLSVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q05030"	"Platelet-derived growth factor receptor beta OS=Rattus norvegicus OX=10116 GN=Pdgfrb PE=2 SV=2"	"Q05030"	"Platelet-derived growth factor receptor beta OS=Rattus norvegicus OX=10116 GN=Pdgfrb PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"427.24841"	"1279.73069"	"1279.73200"	"-1.03"	"-0.00044"	"9/82"	"9"	"82"	"1666215.57293701"	"HCD"	"MS2"	"30.07417"	"73.7"	"100.000"	"32.4852"	"8223"	"8223"	"8195"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"106.2"	""	"89.4"	""	"96.2"	""	"127.0"	"2.4"	"136.7"	"140.7"	""	"773"	"15"	"35.000"	"28.000"	"1.20267836429148"	"13"	"0.0008629"	"0.009796"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDMLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"640.36938"	"1279.73149"	"1279.73319"	"-1.33"	"-0.00085"	"12/54"	"12"	"54"	"17135886.630127"	"HCD"	"MS2"	"0"	"847.3"	"65.007"	"62.0129"	"20198"	"20198"	"20193"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1234.3"	""	"1110.7"	""	"1231.7"	""	"1170.3"	""	"1532.8"	"1756.0"	""	"767"	"36"	"35.000"	"28.000"	"0.00941380869165209"	"27"	"0.005001"	"0.0569"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDMLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"640.36951"	"1279.73174"	"1279.73319"	"-1.14"	"-0.00073"	"12/54"	"12"	"54"	"6481349.2633667"	"HCD"	"MS2"	"10.56118"	"480.8"	"100.000"	"61.7516"	"20094"	"20094"	"20081"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"743.5"	""	"682.1"	""	"690.6"	""	"732.0"	""	"810.4"	"897.0"	""	"828"	"36"	"36.000"	"29.000"	"0.0106169639111834"	"27"	"0.004606"	"0.04991"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDMLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.6400"	"0.0000"	"1"	"1"	"1"	"427.24887"	"1279.73206"	"1279.73319"	"-0.89"	"-0.00038"	"5/54"	"5"	"54"	"1596482.95196533"	"HCD"	"MS2"	"39.34407"	"88.1"	"100.000"	"62.0105"	"20183"	"20183"	"20165"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"123.1"	"4.7"	"129.4"	""	"122.3"	""	"132.8"	""	"150.1"	"178.5"	""	"799"	"25"	"36.000"	"29.000"	"0.118718057967934"	"23"	"0.00918"	"0.1197"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDMLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"640.36969"	"1279.73210"	"1279.73319"	"-0.85"	"-0.00055"	"5/54"	"5"	"54"	"1449313.88598633"	"HCD"	"MS2"	"18.81713"	"118.1"	"100.000"	"62.4482"	"20356"	"20356"	"20344"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"175.4"	""	"149.6"	""	"163.9"	""	"168.1"	""	"224.3"	"242.6"	""	"799"	"32"	"36.000"	"29.000"	"0.024016890812457"	"24"	"0.003449"	"0.03446"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDMLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"640.36981"	"1279.73235"	"1279.73319"	"-0.66"	"-0.00042"	"12/54"	"12"	"54"	"15658704.0421753"	"HCD"	"MS2"	"0"	"915.4"	"79.030"	"62.1504"	"20238"	"20238"	"20233"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1310.6"	""	"1230.4"	""	"1372.6"	""	"1240.7"	""	"1643.1"	"1888.1"	""	"799"	"38"	"36.000"	"29.000"	"0.00659958738392492"	"28"	"0.004606"	"0.04986"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDAMLLK"	"[K].dDAmLLk.[G]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"640.36987"	"1279.73247"	"1279.73320"	"-0.57"	"-0.00036"	"10/50"	"10"	"50"	"3376979.14971924"	"HCD"	"MS2"	"16.1237"	"191.5"	"100.000"	"57.5034"	"18395"	"18395"	"18377"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"225.4"	""	"192.4"	""	"250.4"	""	"530.5"	""	"326.2"	"288.5"	""	"789"	"24"	"35.000"	"28.000"	"0.167127150106544"	"25"	"0.007602"	"0.08989"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDMLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"640.37000"	"1279.73271"	"1279.73319"	"-0.38"	"-0.00024"	"12/54"	"12"	"54"	"6271914.40161133"	"HCD"	"MS2"	"0"	"475.3"	"100.000"	"61.8778"	"20130"	"20130"	"20113"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"706.5"	""	"677.5"	""	"683.5"	""	"730.0"	""	"806.3"	"900.4"	""	"789"	"38"	"35.000"	"28.000"	"0.00688726839327139"	"28"	"0.003967"	"0.04179"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDAMLLK"	"[K].dDAmLLk.[G]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.2941"	"0.0000"	"1"	"1"	"1"	"640.37006"	"1279.73284"	"1279.73320"	"-0.28"	"-0.00018"	"5/50"	"5"	"50"	"2371780.87121582"	"HCD"	"MS2"	"27.2787"	"123.9"	"100.000"	"57.1972"	"18270"	"18270"	"18253"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"152.9"	""	"125.3"	""	"156.1"	""	"350.9"	""	"201.8"	"186.1"	""	"789"	"17"	"35.000"	"28.000"	"0.812918500785015"	"25"	"0.00912"	"0.1189"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVDQPLSVR"	"[R].hVDQPLSVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q05030"	"Platelet-derived growth factor receptor beta OS=Rattus norvegicus OX=10116 GN=Pdgfrb PE=2 SV=2"	"Q05030"	"Platelet-derived growth factor receptor beta OS=Rattus norvegicus OX=10116 GN=Pdgfrb PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"427.24915"	"1279.73288"	"1279.73200"	"0.69"	"0.00029"	"8/82"	"8"	"82"	"1295503.78125"	"HCD"	"MS2"	"66.09538"	"59.4"	"100.000"	"32.5867"	"8258"	"8258"	"8227"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"81.0"	""	"62.8"	""	"78.5"	""	"104.3"	"2.3"	"118.2"	"116.5"	""	"789"	"9"	"35.000"	"28.000"	"4.66709893733577"	"13"	"0.008668"	"0.1084"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPNTTFNSR"	"[R].dPNTTFNSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"640.82526"	"1280.64324"	"1280.64324"	"-0.01"	"0.00000"	"7/90"	"7"	"90"	"1304147.32305908"	"HCD"	"MS2"	"35.71501"	"76.3"	"100.000"	"32.5040"	"8224"	"8224"	"8200"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"112.8"	""	"107.7"	""	"106.0"	""	"117.3"	""	"132.3"	"147.5"	""	"609"	"30"	"34.000"	"27.000"	"0.027963227562925"	"21"	"0"	"0.001923"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPNTTFNSR"	"[R].dPNTTFNSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"640.82538"	"1280.64348"	"1280.64324"	"0.18"	"0.00012"	"7/90"	"7"	"90"	"2112952.14105225"	"HCD"	"MS2"	"21.54133"	"111.9"	"100.000"	"32.5198"	"8237"	"8237"	"8211"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"176.1"	""	"150.6"	""	"152.3"	""	"161.2"	"0.6"	"222.5"	"196.7"	""	"610"	"36"	"34.000"	"27.000"	"0.00729961305703643"	"24"	"0"	"0.001205"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLTTMGDR"	"[R].eLLTTmGDR.[F]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"3"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; Q64122; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light polypeptide 9 OS=Rattus norvegicus OX=10116 GN=Myl9 PE=1 SV=2; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"640.84027"	"1280.67327"	"1280.67177"	"1.17"	"0.00075"	"8/78"	"8"	"78"	"2253105.12835693"	"HCD"	"MS2"	"0"	"110.3"	"100.000"	"43.4639"	"12671"	"12671"	"12650"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"100.9"	""	"107.7"	""	"100.3"	""	"301.5"	"0.1"	"229.8"	"207.9"	""	"679"	"24"	"35.000"	"28.000"	"0.130268609844629"	"19"	"0.007413"	"0.08819"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLTTMGDR"	"[R].eLLTTmGDR.[F]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"3"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; Q64122; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light polypeptide 9 OS=Rattus norvegicus OX=10116 GN=Myl9 PE=1 SV=2; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"640.84039"	"1280.67351"	"1280.67177"	"1.36"	"0.00087"	"8/78"	"8"	"78"	"2172013.08190918"	"HCD"	"MS2"	"0"	"108.0"	"100.000"	"43.3416"	"12632"	"12632"	"12607"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"108.5"	""	"100.1"	""	"100.3"	""	"291.8"	""	"217.6"	"209.5"	""	"681"	"32"	"35.000"	"28.000"	"0.0193694422952328"	"20"	"0.003507"	"0.0366"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAAYTDLR"	"[R].lEAAYTDLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"640.85516"	"1280.70305"	"1280.70478"	"-1.35"	"-0.00087"	"6/74"	"6"	"74"	"816579.221862793"	"HCD"	"MS2"	"23.74894"	"41.2"	"100.000"	"69.9433"	"23405"	"23405"	"23385"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.0"	""	"59.1"	""	"55.3"	""	"64.4"	""	"72.6"	"83.2"	""	"722"	"47"	"35.000"	"28.000"	"0.000775366801161123"	"24"	"0"	"0.001106"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTFLEASR"	"[R].eVTFLEASR.[F]"	"N-Term(TMT6plex)"	"1"	"2"	"P05714"	"Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3"	"P05714; P51146"	"Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3; Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"640.85522"	"1280.70317"	"1280.70478"	"-1.26"	"-0.00080"	"6/78"	"6"	"78"	"378341.314941406"	"HCD"	"MS2"	"0"	"26.4"	"100.000"	"68.3064"	"22738"	"22738"	"22710"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.1"	""	"24.5"	""	"31.7"	""	"52.6"	"1.3"	"51.9"	"48.2"	""	"722"	"36"	"35.000"	"28.000"	"0.00854097010792359"	"24"	"0.0002479"	"0.006001"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTFLEASR"	"[R].eVTFLEASR.[F]"	"N-Term(TMT6plex)"	"1"	"2"	"P05714"	"Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3"	"P05714; P51146"	"Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3; Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1"	"0"	"2"	"2"	"0.6444"	"0.0000"	"1"	"1"	"1"	"640.85522"	"1280.70317"	"1280.70478"	"-1.26"	"-0.00080"	"7/78"	"7"	"78"	"539863.821044922"	"HCD"	"MS2"	"7.652865"	"32.4"	"100.000"	"68.5127"	"22836"	"22836"	"22815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.1"	""	"37.4"	""	"34.6"	""	"55.8"	""	"71.7"	"76.6"	""	"722"	"45"	"35.000"	"28.000"	"0.00109271574754457"	""	"0"	"0.0005996"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAAYTDLR"	"[R].lEAAYTDLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"640.85535"	"1280.70342"	"1280.70478"	"-1.07"	"-0.00068"	"7/74"	"7"	"74"	"729776.135498047"	"HCD"	"MS2"	"35.63814"	"36.8"	"100.000"	"69.7730"	"23350"	"23350"	"23326"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.8"	""	"48.7"	""	"57.0"	""	"58.8"	""	"68.0"	"70.1"	""	"722"	"62"	"35.000"	"28.000"	"2.20550070990911E-05"	"26"	"0"	"0.0002163"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTFLEASR"	"[R].eVTFLEASR.[F]"	"N-Term(TMT6plex)"	"1"	"2"	"P05714"	"Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3"	"P05714; P51146"	"Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3; Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1"	"0"	"2"	"2"	"0.6383"	"0.0000"	"1"	"1"	"1"	"640.85541"	"1280.70354"	"1280.70478"	"-0.97"	"-0.00062"	"7/78"	"7"	"78"	"597651.295349121"	"HCD"	"MS2"	"8.019783"	"35.7"	"100.000"	"68.2082"	"22712"	"22712"	"22687"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.0"	""	"44.1"	""	"46.2"	""	"52.7"	""	"80.2"	"73.3"	""	"717"	"47"	"35.000"	"28.000"	"0.000718603221810411"	""	"0"	"0.000428"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLEDGTFR"	"[R].tLLEDGTFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"640.85547"	"1280.70366"	"1280.70478"	"-0.88"	"-0.00056"	"7/76"	"7"	"76"	"1539039.28936768"	"HCD"	"MS2"	"0"	"76.9"	"100.000"	"71.6284"	"24107"	"24107"	"24090"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"118.2"	""	"114.2"	""	"114.7"	""	"115.8"	""	"129.5"	"136.0"	""	"714"	"50"	"35.000"	"28.000"	"0.000360303280329376"	"20"	"0"	"0.0003727"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTFLEASR"	"[R].eVTFLEASR.[F]"	"N-Term(TMT6plex)"	"1"	"2"	"P05714"	"Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3"	"P05714; P51146"	"Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3; Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"640.85571"	"1280.70415"	"1280.70478"	"-0.49"	"-0.00032"	"7/78"	"7"	"78"	"737339.364990234"	"HCD"	"MS2"	"0"	"43.5"	"100.000"	"68.5946"	"22855"	"22855"	"22837"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.7"	""	"48.4"	""	"52.0"	""	"72.3"	""	"99.1"	"99.2"	""	"714"	"44"	"35.000"	"28.000"	"0.00155477738905748"	""	"0"	"0.0003547"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLEDGTFR"	"[R].tLLEDGTFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"640.85614"	"1280.70500"	"1280.70478"	"0.17"	"0.00011"	"7/76"	"7"	"76"	"672258.684387207"	"HCD"	"MS2"	"11.01766"	"37.6"	"100.000"	"71.4591"	"24024"	"24024"	"24000"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.9"	""	"52.6"	""	"51.6"	""	"59.6"	""	"76.2"	"62.3"	""	"729"	"50"	"35.000"	"28.000"	"0.000375575740900969"	"20"	"0"	"0.000616"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLEDGTFR"	"[R].tLLEDGTFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"640.85614"	"1280.70500"	"1280.70478"	"0.17"	"0.00011"	"7/76"	"7"	"76"	"1249373.62115479"	"HCD"	"MS2"	"0"	"64.8"	"100.000"	"71.7797"	"24154"	"24154"	"24136"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.6"	""	"93.3"	""	"95.2"	""	"101.8"	"0.1"	"111.9"	"120.2"	""	"729"	"45"	"35.000"	"28.000"	"0.00108566923852694"	"19"	"0"	"0.0004962"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLEDGTFR"	"[R].tLLEDGTFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"640.85626"	"1280.70525"	"1280.70478"	"0.36"	"0.00023"	"7/76"	"7"	"76"	"591782.351196289"	"HCD"	"MS2"	"0"	"35.6"	"100.000"	"71.3332"	"23986"	"23986"	"23962"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.9"	""	"50.6"	""	"53.5"	""	"53.8"	"0.1"	"60.9"	"69.3"	""	"698"	"47"	"35.000"	"28.000"	"0.000638006975433817"	"20"	"0"	"0.0004559"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGVDSDK"	"[K].tTGVDSDk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P19814"	"Trans-Golgi network integral membrane protein TGN38 OS=Rattus norvegicus OX=10116 GN=Ttgn1 PE=1 SV=1"	"P19814"	"Trans-Golgi network integral membrane protein TGN38 OS=Rattus norvegicus OX=10116 GN=Ttgn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"640.85791"	"1280.70854"	"1280.70982"	"-0.99"	"-0.00064"	"12/68"	"12"	"68"	"1582520.65930176"	"HCD"	"MS2"	"7.784159"	"131.7"	"100.000"	"29.3785"	"6965"	"6965"	"6948"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"143.7"	""	"106.5"	""	"137.6"	""	"262.7"	""	"298.6"	"306.2"	""	"713"	"38"	"35.000"	"28.000"	"0.00539584585067508"	"24"	"0"	"0.003445"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGVDSDK"	"[K].tTGVDSDk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P19814"	"Trans-Golgi network integral membrane protein TGN38 OS=Rattus norvegicus OX=10116 GN=Ttgn1 PE=1 SV=1"	"P19814"	"Trans-Golgi network integral membrane protein TGN38 OS=Rattus norvegicus OX=10116 GN=Ttgn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"640.85913"	"1280.71099"	"1280.70982"	"0.91"	"0.00058"	"12/68"	"12"	"68"	"1688652.3515625"	"HCD"	"MS2"	"0"	"145.2"	"100.000"	"29.4524"	"6983"	"6983"	"6963"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"144.8"	"2.3"	"115.9"	""	"149.1"	""	"290.9"	""	"340.7"	"341.4"	""	"709"	"36"	"35.000"	"28.000"	"0.00800969980543336"	"24"	"0.0002479"	"0.00509"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLSAEPELR"	"[R].hLSAEPELR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"A1L1J9"	"Lipase maturation factor 2 OS=Rattus norvegicus OX=10116 GN=Lmf2 PE=2 SV=1"	"A1L1J9"	"Lipase maturation factor 2 OS=Rattus norvegicus OX=10116 GN=Lmf2 PE=2 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"427.57614"	"1280.71387"	"1280.71602"	"-1.67"	"-0.00072"	"7/72"	"7"	"72"	"3718942.33856201"	"HCD"	"MS2"	"18.91632"	"64.7"	"100.000"	"34.7525"	"9139"	"9139"	"9121"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.0"	""	"75.9"	""	"83.6"	""	"108.6"	"0.5"	"137.8"	"133.5"	""	"709"	"51"	"35.000"	"28.000"	"0.000274546707320993"	"27"	"0"	"0.0005664"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLSAEPELR"	"[R].hLSAEPELR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"A1L1J9"	"Lipase maturation factor 2 OS=Rattus norvegicus OX=10116 GN=Lmf2 PE=2 SV=1"	"A1L1J9"	"Lipase maturation factor 2 OS=Rattus norvegicus OX=10116 GN=Lmf2 PE=2 SV=1"	"0"	"3"	"3"	"0.8723"	"0.0000"	"1"	"1"	"1"	"427.57657"	"1280.71515"	"1280.71602"	"-0.67"	"-0.00029"	"7/72"	"7"	"72"	"3581255.65289307"	"HCD"	"MS2"	"21.75668"	"63.0"	"100.000"	"34.8229"	"9162"	"9162"	"9147"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.8"	""	"68.8"	""	"73.7"	""	"103.2"	""	"132.9"	"141.9"	""	"698"	"47"	"35.000"	"28.000"	"0.000645394748023349"	"22"	"0"	"0.000373"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DANGNSFATR"	"[K].dANGNSFATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.8852"	"0.0000"	"1"	"1"	"1"	"641.32214"	"1281.63701"	"1281.63849"	"-1.16"	"-0.00074"	"9/102"	"9"	"102"	"2150572.64093018"	"HCD"	"MS2"	"0"	"110.3"	"100.000"	"27.8865"	"6360"	"6360"	"6337"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"185.7"	""	"169.5"	""	"173.2"	""	"166.1"	"0.8"	"179.8"	"166.8"	""	"557"	"61"	"34.000"	"27.000"	"2.22753840019458E-05"	"23"	"0"	"4.026E-05"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DANGNSFATR"	"[K].dANGNSFATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.7414"	"0.0000"	"1"	"1"	"1"	"641.32269"	"1281.63811"	"1281.63849"	"-0.30"	"-0.00019"	"9/102"	"9"	"102"	"1398772.52166748"	"HCD"	"MS2"	"0"	"75.7"	"100.000"	"27.9028"	"6352"	"6352"	"6326"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"123.3"	""	"104.5"	""	"122.3"	""	"122.4"	""	"119.6"	"128.0"	""	"590"	"58"	"34.000"	"27.000"	"5.05617405714985E-05"	""	"0"	"2.232E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFETVGQDR"	"[K].tFETVGQDR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q499N5"	"Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acsf2 PE=2 SV=1"	"Q499N5"	"Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acsf2 PE=2 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"641.33563"	"1281.66399"	"1281.66365"	"0.27"	"0.00017"	"8/82"	"8"	"82"	"4176036.51843262"	"HCD"	"MS2"	"43.4042"	"199.4"	"100.000"	"40.7956"	"11594"	"11594"	"11578"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"292.1"	""	"277.3"	""	"304.4"	""	"282.5"	""	"371.6"	"362.7"	""	"607"	"38"	"34.000"	"27.000"	"0.00533529816836463"	"19"	"0"	"0.00257"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFETVGQDR"	"[K].tFETVGQDR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q499N5"	"Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acsf2 PE=2 SV=1"	"Q499N5"	"Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acsf2 PE=2 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"641.33575"	"1281.66423"	"1281.66365"	"0.46"	"0.00029"	"8/82"	"8"	"82"	"4008143.02233887"	"HCD"	"MS2"	"40.79739"	"204.3"	"100.000"	"40.9868"	"11662"	"11662"	"11644"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"321.1"	""	"281.0"	""	"303.5"	""	"279.9"	""	"363.1"	"391.5"	""	"610"	"40"	"34.000"	"27.000"	"0.00283334747967881"	"18"	"0"	"0.0004003"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGTSDALLYR"	"[K].gGTSDALLYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P35171"	"Cytochrome c oxidase subunit 7A2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox7a2 PE=1 SV=1"	"P35171"	"Cytochrome c oxidase subunit 7A2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox7a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"641.35352"	"1281.69975"	"1281.70003"	"-0.22"	"-0.00014"	"9/76"	"9"	"76"	"2321388.04919434"	"HCD"	"MS2"	"23.6831"	"134.9"	"100.000"	"50.4593"	"15514"	"15514"	"15486"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"152.4"	""	"190.1"	""	"172.5"	""	"221.4"	"0.4"	"286.3"	"257.8"	""	"682"	"50"	"35.000"	"28.000"	"0.000311712615341355"	""	"0"	"5.106E-05"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFEDEVK"	"[K].gFEDEVk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"641.35736"	"1281.70745"	"1281.70909"	"-1.28"	"-0.00082"	"6/52"	"6"	"52"	"1095184.30648804"	"HCD"	"MS2"	"10.60897"	"90.6"	"100.000"	"53.2566"	"16666"	"16666"	"16637"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"109.8"	""	"113.2"	""	"112.4"	""	"150.7"	""	"196.1"	"185.1"	""	"659"	"31"	"35.000"	"28.000"	"0.0239251912974883"	"25"	"0.002973"	"0.02988"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFEDEVK"	"[K].gFEDEVk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"641.35797"	"1281.70867"	"1281.70909"	"-0.33"	"-0.00021"	"6/52"	"6"	"52"	"1020268.29821777"	"HCD"	"MS2"	"9.688204"	"87.2"	"100.000"	"53.5242"	"16764"	"16764"	"16738"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"101.8"	""	"96.0"	""	"120.5"	""	"145.1"	"0.9"	"191.8"	"172.1"	""	"648"	"30"	"35.000"	"28.000"	"0.0344782337904678"	"24"	"0.00263"	"0.02558"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFEEAEK"	"[K].aFEEAEk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"641.35822"	"1281.70915"	"1281.70909"	"0.05"	"0.00003"	"12/54"	"12"	"54"	"6883147.37365723"	"HCD"	"MS2"	"0"	"554.9"	"100.000"	"45.8020"	"13615"	"13615"	"13597"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"824.1"	""	"627.7"	""	"664.7"	""	"950.2"	""	"1114.9"	"1087.3"	""	"650"	"35"	"35.000"	"28.000"	"0.0109871071766944"	""	"0.004022"	"0.04353"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFEEAEK"	"[K].aFEEAEk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"641.35828"	"1281.70928"	"1281.70909"	"0.15"	"0.00009"	"12/54"	"12"	"54"	"5942328.37957764"	"HCD"	"MS2"	"4.013617"	"445.1"	"100.000"	"45.6134"	"13551"	"13551"	"13534"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"654.9"	""	"489.7"	""	"526.7"	""	"782.1"	""	"893.6"	"880.4"	""	"650"	"35"	"35.000"	"28.000"	"0.0105896927825653"	""	"0.003967"	"0.0412"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFEEAEK"	"[K].aFEEAEk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"641.35858"	"1281.70989"	"1281.70909"	"0.62"	"0.00040"	"6/54"	"6"	"54"	"1756630.19158936"	"HCD"	"MS2"	"0"	"133.2"	"100.000"	"45.9150"	"13674"	"13674"	"13658"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"190.4"	""	"149.1"	""	"142.9"	""	"240.0"	""	"271.0"	"271.2"	""	"642"	"35"	"35.000"	"28.000"	"0.011079114032681"	""	"0.002973"	"0.029"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNINVEGPPR"	"[R].gNINVEGPPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P26453"	"Basigin OS=Rattus norvegicus OX=10116 GN=Bsg PE=1 SV=2"	"P26453"	"Basigin OS=Rattus norvegicus OX=10116 GN=Bsg PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"641.35919"	"1281.71111"	"1281.71126"	"-0.12"	"-0.00008"	"9/88"	"9"	"88"	"1924592.7208252"	"HCD"	"MS2"	"44.11949"	"106.7"	"100.000"	"40.5284"	"11486"	"11486"	"11459"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"134.9"	""	"125.5"	""	"138.3"	""	"192.5"	""	"194.8"	"226.5"	""	"683"	"41"	"35.000"	"28.000"	"0.00257863995747746"	"15"	"0"	"0.000338"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFEEAEK"	"[K].aFEEAEk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.2963"	"0.0000"	"1"	"1"	"1"	"641.35931"	"1281.71135"	"1281.70909"	"1.77"	"0.00113"	"10/54"	"10"	"54"	"1248253.62445068"	"HCD"	"MS2"	"3.559697"	"107.1"	"100.000"	"46.1266"	"13748"	"13748"	"13725"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"155.0"	""	"116.8"	""	"128.2"	""	"173.1"	""	"217.5"	"227.1"	""	"657"	"27"	"35.000"	"28.000"	"0.068475525509746"	""	"0.005001"	"0.05613"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNINVEGPPR"	"[R].gNINVEGPPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P26453"	"Basigin OS=Rattus norvegicus OX=10116 GN=Bsg PE=1 SV=2"	"P26453"	"Basigin OS=Rattus norvegicus OX=10116 GN=Bsg PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"641.35999"	"1281.71269"	"1281.71126"	"1.12"	"0.00071"	"8/88"	"8"	"88"	"1783806.72790527"	"HCD"	"MS2"	"51.12972"	"101.0"	"100.000"	"40.7131"	"11551"	"11551"	"11528"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"143.0"	""	"117.8"	""	"130.1"	""	"169.3"	""	"200.2"	"198.8"	""	"649"	"47"	"35.000"	"28.000"	"0.0006564697234811"	"15"	"0"	"0.0002735"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAAENPGK"	"[K].hAAENPGk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"641.36841"	"1281.72954"	"1281.73156"	"-1.57"	"-0.00101"	"7/62"	"7"	"62"	"984666.113098145"	"HCD"	"MS2"	"0"	"81.9"	"100.000"	"20.0515"	"3199"	"3199"	"3172"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"126.7"	""	"82.7"	""	"77.7"	""	"155.0"	""	"176.7"	"164.3"	""	"594"	"27"	"34.000"	"27.000"	"0.0545451887974459"	"14"	"0.001134"	"0.01401"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAAENPGK"	"[K].hAAENPGk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"641.36847"	"1281.72966"	"1281.73156"	"-1.48"	"-0.00095"	"7/62"	"7"	"62"	"322143.830444336"	"HCD"	"MS2"	"0"	"27.6"	"100.000"	"20.1627"	"3239"	"3239"	"3228"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.3"	""	"29.1"	""	"27.5"	""	"53.0"	""	"60.4"	"56.8"	""	"579"	"32"	"34.000"	"27.000"	"0.0170863212709749"	"15"	"0.0005778"	"0.008085"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAAENPGK"	"[K].hAAENPGk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"427.91483"	"1281.72992"	"1281.73156"	"-1.27"	"-0.00054"	"8/62"	"8"	"62"	"4994361.90270996"	"HCD"	"MS2"	"10.56858"	"105.8"	"39.910"	"20.0698"	"3206"	"3206"	"3184"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"146.6"	""	"115.6"	""	"106.8"	""	"194.7"	"0.9"	"224.4"	"216.4"	""	"577"	"26"	"34.000"	"27.000"	"0.0792767463170042"	"14"	"0.0001301"	"0.004943"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAAENPGK"	"[K].hAAENPGk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"427.91483"	"1281.72992"	"1281.73156"	"-1.27"	"-0.00054"	"8/62"	"8"	"62"	"5517387.40246582"	"HCD"	"MS2"	"10.11099"	"120.3"	"42.031"	"20.1100"	"3218"	"3218"	"3196"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"160.1"	""	"125.6"	""	"117.5"	""	"222.4"	""	"272.7"	"245.8"	""	"577"	"28"	"34.000"	"27.000"	"0.0450968094901916"	"14"	"0.0001301"	"0.00425"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEDYVK"	"[K].iGEDYVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"641.37567"	"1281.74407"	"1281.74547"	"-1.10"	"-0.00070"	"7/50"	"7"	"50"	"587761.988647461"	"HCD"	"MS2"	"29.62763"	"54.3"	"100.000"	"58.6298"	"18855"	"18855"	"18831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"86.4"	""	"56.8"	""	"72.9"	""	"86.4"	"0.3"	"103.7"	"108.4"	""	"503"	"24"	"34.000"	"27.000"	"0.106301156487799"	"17"	"0.005309"	"0.05989"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEDYVK"	"[K].iGEDYVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"641.37579"	"1281.74431"	"1281.74547"	"-0.91"	"-0.00058"	"7/50"	"7"	"50"	"552165.417053223"	"HCD"	"MS2"	"23.26647"	"50.2"	"100.000"	"58.8550"	"18932"	"18932"	"18904"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"74.2"	""	"69.7"	""	"66.6"	""	"74.9"	"1.1"	"90.3"	"99.1"	""	"466"	"19"	"33.000"	"26.000"	"0.297410242453043"	"14"	"0.003449"	"0.03264"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DANGNSFATR"	"[K].dAnGNSFATR.[L]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"641.81409"	"1282.62090"	"1282.62251"	"-1.26"	"-0.00081"	"7/102"	"7"	"102"	"365270.429382324"	"HCD"	"MS2"	"100"	"29.9"	"100.000"	"30.4026"	"7369"	"7369"	"7342"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.1"	""	"37.2"	""	"41.9"	""	"52.7"	""	"61.8"	"47.5"	""	"491"	"21"	"33.000"	"26.000"	"0.177031886139402"	"17"	"0.0006732"	"0.008309"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DANGNSFATR"	"[K].dAnGNSFATR.[L]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"641.81464"	"1282.62200"	"1282.62251"	"-0.40"	"-0.00026"	"9/102"	"9"	"102"	"629182.76361084"	"HCD"	"MS2"	"0"	"40.9"	"100.000"	"30.3955"	"7378"	"7378"	"7348"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.2"	""	"58.4"	""	"53.4"	""	"69.3"	""	"75.8"	"71.4"	""	"510"	"45"	"34.000"	"27.000"	"0.000763027482335088"	"21"	"0"	"0.000162"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFVTTAEDR"	"[R].dFVTTAEDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"641.82654"	"1282.64580"	"1282.64766"	"-1.45"	"-0.00093"	"8/78"	"8"	"78"	"1602169.11810303"	"HCD"	"MS2"	"27.15734"	"101.9"	"100.000"	"47.6045"	"14362"	"14362"	"14333"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"165.7"	""	"133.1"	""	"142.8"	""	"159.0"	"3.2"	"176.3"	"184.1"	""	"566"	"31"	"34.000"	"27.000"	"0.0241427332266978"	"19"	"0.0001301"	"0.004285"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFVTTAEDR"	"[R].dFVTTAEDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"641.82684"	"1282.64641"	"1282.64766"	"-0.98"	"-0.00063"	"8/78"	"8"	"78"	"951752.806396484"	"HCD"	"MS2"	"32.50584"	"69.4"	"100.000"	"47.8662"	"14457"	"14457"	"14426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"110.8"	""	"84.7"	""	"88.5"	""	"112.6"	"0.6"	"131.3"	"129.4"	""	"564"	"33"	"34.000"	"27.000"	"0.0135596696262823"	"20"	"0"	"0.002164"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFVTTAEDR"	"[R].dFVTTAEDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"641.82727"	"1282.64726"	"1282.64766"	"-0.31"	"-0.00020"	"7/78"	"7"	"78"	"891033.193481445"	"HCD"	"MS2"	"0"	"61.1"	"100.000"	"47.9329"	"14495"	"14495"	"14474"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.1"	""	"80.2"	""	"77.1"	""	"107.5"	"3.3"	"116.0"	"114.4"	""	"582"	"38"	"34.000"	"27.000"	"0.00506865800156959"	"16"	"0"	"0.003652"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFVTTAEDR"	"[R].dFVTTAEDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"641.82733"	"1282.64739"	"1282.64766"	"-0.21"	"-0.00014"	"8/78"	"8"	"78"	"961002.001403809"	"HCD"	"MS2"	"12.32648"	"70.0"	"100.000"	"48.2131"	"14597"	"14597"	"14574"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"98.0"	""	"92.2"	""	"92.6"	""	"108.2"	"2.5"	"139.9"	"130.8"	""	"581"	"51"	"34.000"	"27.000"	"0.000233424338494922"	"22"	"0"	"0.0008524"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAGESDMK"	"[R].sAGESDMk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q920L7"	"Elongation of very long chain fatty acids protein 5 OS=Rattus norvegicus OX=10116 GN=Elovl5 PE=1 SV=1"	"Q920L7"	"Elongation of very long chain fatty acids protein 5 OS=Rattus norvegicus OX=10116 GN=Elovl5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"641.83899"	"1282.67070"	"1282.67132"	"-0.48"	"-0.00031"	"5/66"	"5"	"66"	"651242.780273438"	"HCD"	"MS2"	"0"	"65.0"	"100.000"	"29.2595"	"6905"	"6905"	"6875"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"82.4"	""	"70.6"	""	"68.1"	""	"90.8"	"0.9"	"153.6"	"152.0"	""	"583"	"26"	"34.000"	"27.000"	"0.0777389300708012"	"14"	"0.0001301"	"0.003878"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAGESDMK"	"[R].sAGESDMk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q920L7"	"Elongation of very long chain fatty acids protein 5 OS=Rattus norvegicus OX=10116 GN=Elovl5 PE=1 SV=1"	"Q920L7"	"Elongation of very long chain fatty acids protein 5 OS=Rattus norvegicus OX=10116 GN=Elovl5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"641.83948"	"1282.67168"	"1282.67132"	"0.28"	"0.00018"	"11/66"	"11"	"66"	"713249.832519531"	"HCD"	"MS2"	"46.4036"	"68.9"	"100.000"	"29.0866"	"6847"	"6847"	"6816"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"96.0"	""	"79.4"	""	"79.7"	""	"86.5"	"0.4"	"154.7"	"158.5"	""	"562"	"31"	"34.000"	"27.000"	"0.0204035774039278"	"14"	"0"	"0.00141"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVYSEETLR"	"[R].gVYSEETLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3KR86"	"MICOS complex subunit Mic60 (Fragment) OS=Rattus norvegicus OX=10116 GN=Immt PE=1 SV=1"	"Q3KR86"	"MICOS complex subunit Mic60 (Fragment) OS=Rattus norvegicus OX=10116 GN=Immt PE=1 SV=1"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"641.84369"	"1282.68010"	"1282.68405"	"-3.08"	"-0.00197"	"8/70"	"8"	"70"	"1710357.19390869"	"HCD"	"MS2"	"17.58698"	"96.1"	"100.000"	"43.9032"	"12858"	"12858"	"12837"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"102.5"	""	"142.2"	""	"149.1"	""	"134.5"	"0.1"	"182.7"	"200.1"	""	"592"	"46"	"34.000"	"27.000"	"0.000665720163327392"	"20"	"0"	"0.000669"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVYSEETLR"	"[R].gVYSEETLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3KR86"	"MICOS complex subunit Mic60 (Fragment) OS=Rattus norvegicus OX=10116 GN=Immt PE=1 SV=1"	"Q3KR86"	"MICOS complex subunit Mic60 (Fragment) OS=Rattus norvegicus OX=10116 GN=Immt PE=1 SV=1"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"641.84534"	"1282.68340"	"1282.68405"	"-0.51"	"-0.00032"	"8/70"	"8"	"70"	"1494499.42791748"	"HCD"	"MS2"	"0"	"83.1"	"100.000"	"44.0553"	"12909"	"12909"	"12891"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"92.3"	""	"132.4"	""	"127.3"	""	"126.6"	""	"140.1"	"170.4"	""	"619"	"44"	"34.000"	"27.000"	"0.00138248571770723"	"19"	"0"	"0.0003088"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEDFSK"	"[K].aEEDFSk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FR2"	"Bridging integrator 2 OS=Rattus norvegicus OX=10116 GN=Bin2 PE=1 SV=1"	"Q68FR2"	"Bridging integrator 2 OS=Rattus norvegicus OX=10116 GN=Bin2 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"642.34503"	"1283.68279"	"1283.68835"	"-4.34"	"-0.00278"	"6/56"	"6"	"56"	"2064377.38616943"	"HCD"	"MS2"	"0"	"163.9"	"100.000"	"45.1462"	"13360"	"13360"	"13335"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"236.4"	""	"166.9"	""	"186.3"	""	"288.9"	""	"333.3"	"344.4"	""	"571"	"25"	"34.000"	"27.000"	"0.101299222626186"	"24"	"0.008668"	"0.1109"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEDFSK"	"[K].aEEDFSk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FR2"	"Bridging integrator 2 OS=Rattus norvegicus OX=10116 GN=Bin2 PE=1 SV=1"	"Q68FR2"	"Bridging integrator 2 OS=Rattus norvegicus OX=10116 GN=Bin2 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"642.34540"	"1283.68352"	"1283.68835"	"-3.77"	"-0.00242"	"6/56"	"6"	"56"	"2039574.0100708"	"HCD"	"MS2"	"7.69432"	"163.8"	"100.000"	"45.3006"	"13412"	"13412"	"13387"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"225.6"	""	"182.0"	""	"184.8"	""	"294.3"	"1.0"	"335.3"	"332.0"	""	"579"	"25"	"34.000"	"27.000"	"0.0963049406786142"	"24"	"0.007627"	"0.09095"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSYEGQK"	"[K].nSYEGQk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q91ZW6"	"Trimethyllysine dioxygenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tmlhe PE=1 SV=2"	"Q91ZW6"	"Trimethyllysine dioxygenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tmlhe PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"642.35144"	"1283.69560"	"1283.69959"	"-3.10"	"-0.00199"	"12/64"	"12"	"64"	"425130.63885498"	"HCD"	"MS2"	"0"	"42.4"	"100.000"	"27.3948"	"6160"	"6160"	"6137"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.4"	""	"54.3"	""	"51.8"	""	"74.4"	""	"86.2"	"74.7"	""	"567"	"32"	"34.000"	"27.000"	"0.0189912286769585"	""	"0.001886"	"0.02169"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSYEGQK"	"[K].nSYEGQk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q91ZW6"	"Trimethyllysine dioxygenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tmlhe PE=1 SV=2"	"Q91ZW6"	"Trimethyllysine dioxygenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tmlhe PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"642.35400"	"1283.70073"	"1283.69959"	"0.89"	"0.00057"	"10/64"	"10"	"64"	"418304.037780762"	"HCD"	"MS2"	"0"	"41.2"	"100.000"	"27.4643"	"6173"	"6173"	"6150"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.3"	""	"49.4"	""	"50.0"	""	"83.7"	""	"90.5"	"66.3"	""	"578"	"20"	"34.000"	"27.000"	"0.26971049293033"	"26"	"0.003922"	"0.04008"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSFVEK"	"[K].eSSFVEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"642.36499"	"1283.72270"	"1283.72474"	"-1.59"	"-0.00102"	"12/58"	"12"	"58"	"1627032.57159424"	"HCD"	"MS2"	"5.846823"	"129.9"	"100.000"	"48.9719"	"14906"	"14906"	"14888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"189.8"	""	"160.1"	""	"173.8"	""	"208.4"	"1.8"	"234.7"	"262.6"	""	"561"	"35"	"34.000"	"27.000"	"0.0099525155680018"	"26"	"0.003449"	"0.0346"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSFVEK"	"[K].eSSFVEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"642.36505"	"1283.72283"	"1283.72474"	"-1.49"	"-0.00096"	"6/58"	"6"	"58"	"1230390.03729248"	"HCD"	"MS2"	"0"	"97.4"	"100.000"	"48.6461"	"14786"	"14786"	"14767"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"149.4"	""	"119.3"	""	"126.9"	""	"148.9"	""	"194.2"	"191.9"	""	"561"	"28"	"34.000"	"27.000"	"0.0404513356102726"	"23"	"0.004606"	"0.04965"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGVYEEK"	"[K].tGVYEEk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"642.36548"	"1283.72368"	"1283.72474"	"-0.82"	"-0.00053"	"6/58"	"6"	"58"	"3805438.30487061"	"HCD"	"MS2"	"0"	"324.2"	"100.000"	"39.5007"	"11066"	"11066"	"11052"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"428.4"	""	"363.3"	""	"439.4"	""	"518.3"	""	"650.6"	"678.8"	""	"517"	"31"	"34.000"	"27.000"	"0.0191187963602555"	"22"	"0.004069"	"0.04374"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGVYEEK"	"[K].tGVYEEk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"642.36548"	"1283.72368"	"1283.72474"	"-0.82"	"-0.00053"	"6/58"	"6"	"58"	"5335764.47399902"	"HCD"	"MS2"	"0"	"420.0"	"100.000"	"39.2134"	"10949"	"10949"	"10931"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"619.9"	""	"524.5"	""	"519.0"	""	"680.5"	""	"812.3"	"827.8"	""	"517"	"31"	"34.000"	"27.000"	"0.0188564766400806"	"22"	"0.00447"	"0.04863"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSFVEK"	"[K].eSSFVEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"642.36554"	"1283.72380"	"1283.72474"	"-0.73"	"-0.00047"	"6/58"	"6"	"58"	"2019642.19647217"	"HCD"	"MS2"	"26.94194"	"137.2"	"100.000"	"48.6796"	"14787"	"14787"	"14764"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"207.2"	""	"192.2"	""	"171.3"	""	"217.5"	""	"248.3"	"265.4"	""	"518"	"28"	"34.000"	"27.000"	"0.0370936665911848"	"21"	"0.00413"	"0.04533"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSFVEK"	"[K].eSSFVEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"642.36578"	"1283.72429"	"1283.72474"	"-0.35"	"-0.00022"	"12/58"	"12"	"58"	"2454366.21398926"	"HCD"	"MS2"	"25.47565"	"177.5"	"100.000"	"48.3376"	"14660"	"14660"	"14642"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"276.7"	""	"214.0"	""	"228.8"	""	"290.3"	""	"337.8"	"335.8"	""	"518"	"23"	"34.000"	"27.000"	"0.136867320209772"	"22"	"0.005874"	"0.0666"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGVYEEK"	"[K].tGVYEEk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"642.36584"	"1283.72441"	"1283.72474"	"-0.25"	"-0.00016"	"6/58"	"6"	"58"	"8361793.49414063"	"HCD"	"MS2"	"1.059084"	"655.0"	"100.000"	"39.4604"	"11040"	"11040"	"11025"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"932.3"	""	"798.4"	""	"830.4"	""	"1097.2"	"2.6"	"1252.6"	"1297.2"	""	"518"	"31"	"34.000"	"27.000"	"0.0185481143245142"	"22"	"0.004606"	"0.04958"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGVYEEK"	"[K].tGVYEEk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"642.36597"	"1283.72466"	"1283.72474"	"-0.06"	"-0.00004"	"6/58"	"6"	"58"	"1852181.22167969"	"HCD"	"MS2"	"0"	"169.9"	"100.000"	"39.7773"	"11170"	"11170"	"11149"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"229.4"	""	"196.9"	""	"217.0"	""	"280.1"	"2.0"	"341.3"	"345.2"	""	"518"	"31"	"34.000"	"27.000"	"0.0208113265646075"	"24"	"0.002973"	"0.02947"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKTPGPGAQSALR"	"[R].TKTPGPGAQSALR.[A]"	""	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"1"	"2"	"2"	"0.1455"	"0.0000"	"1"	"1"	"1"	"642.36676"	"1283.72624"	"1283.70662"	"15.28"	"0.00981"	"11/136"	"11"	"136"	"7162230.31103516"	"HCD"	"MS2"	"0"	"197.7"	"100.000"	"33.6799"	"8707"	"8707"	"8692"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"313.0"	""	"343.4"	""	"373.6"	""	"332.5"	""	"256.9"	"244.1"	"NoQuanLabels"	"515"	"55"	"34.000"	"27.000"	"7.99424093943052E-05"	"21"	"0.001374"	"0.01608"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKTPGPGAQSALR"	"[R].TKTPGPGAQSALR.[A]"	""	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"1"	"2"	"2"	"0.1509"	"0.0000"	"1"	"1"	"1"	"642.36682"	"1283.72637"	"1283.70662"	"15.38"	"0.00987"	"11/136"	"11"	"136"	"4244735.02374268"	"HCD"	"MS2"	"0"	"130.4"	"100.000"	"33.7375"	"8724"	"8724"	"8707"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"200.4"	""	"228.8"	""	"236.3"	""	"213.5"	"0.4"	"182.8"	"167.5"	"NoQuanLabels"	"515"	"53"	"34.000"	"27.000"	"0.000139886960359302"	"22"	"0.002973"	"0.03029"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKTPGPGAQSALR"	"[R].TKTPGPGAQSALR.[A]"	""	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"1"	"2"	"2"	"0.1455"	"0.0000"	"1"	"1"	"1"	"642.36761"	"1283.72795"	"1283.70662"	"16.61"	"0.01066"	"11/136"	"11"	"136"	"8212169.65441895"	"HCD"	"MS2"	"0"	"232.2"	"100.000"	"33.4502"	"8608"	"8608"	"8592"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"361.2"	""	"390.9"	""	"411.1"	""	"413.2"	""	"332.3"	"281.1"	"NoQuanLabels"	"546"	"55"	"34.000"	"27.000"	"8.81378895227549E-05"	"21"	"0.002147"	"0.02281"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKTPGPGAQSALR"	"[R].TKTPGPGAQSALR.[A]"	""	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"1"	"2"	"2"	"0.1455"	"0.0000"	"1"	"1"	"1"	"642.36816"	"1283.72905"	"1283.70662"	"17.47"	"0.01121"	"11/136"	"11"	"136"	"5925697.42071533"	"HCD"	"MS2"	"0"	"187.7"	"100.000"	"33.4022"	"8595"	"8595"	"8583"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"274.3"	""	"291.2"	""	"327.9"	""	"333.3"	""	"283.4"	"263.4"	"NoQuanLabels"	"556"	"55"	"34.000"	"27.000"	"8.28027567381314E-05"	""	"0.004542"	"0.04923"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEITLPPTR"	"[K].qEITLPPTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"642.37872"	"1283.75017"	"1283.75207"	"-1.48"	"-0.00095"	"5/92"	"5"	"92"	"450986.522644043"	"HCD"	"MS2"	"69.96921"	"29.6"	"100.000"	"55.9326"	"17755"	"17755"	"17729"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.0"	""	"36.4"	""	"34.7"	""	"46.6"	""	"46.2"	"86.5"	""	"490"	"17"	"33.000"	"26.000"	"0.532311788821618"	"21"	"0.003111"	"0.03117"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEITLPPTR"	"[K].qEITLPPTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"642.37946"	"1283.75163"	"1283.75207"	"-0.34"	"-0.00022"	"7/92"	"7"	"92"	"581861.381347656"	"HCD"	"MS2"	"43.10769"	"28.9"	"100.000"	"55.5527"	"17600"	"17600"	"17574"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.9"	""	"34.0"	""	"40.5"	""	"44.4"	""	"58.5"	"55.4"	""	"468"	"14"	"33.000"	"26.000"	"0.859440583165517"	"13"	"0.0023"	"0.02339"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEITLPPTR"	"[K].qEITLPPTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"642.37964"	"1283.75200"	"1283.75207"	"-0.05"	"-0.00003"	"5/92"	"5"	"92"	"582631.378417969"	"HCD"	"MS2"	"52.1208"	"27.6"	"100.000"	"55.7365"	"17661"	"17661"	"17634"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.9"	""	"30.6"	""	"41.6"	""	"45.2"	""	"56.4"	"52.4"	""	"468"	"10"	"33.000"	"26.000"	"2.11453976851019"	"13"	"0.002547"	"0.02506"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAHLQWMVVR"	"[M].sAHLQWmVVR.[N]"	"N-Term(Prot)(Acetyl); M7(Oxidation)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"642.82892"	"1284.65056"	"1284.65175"	"-0.93"	"-0.00060"	"6/82"	"6"	"82"	"687600.009887695"	"HCD"	"MS2"	"5.552272"	"16.3"	"100.000"	"64.1577"	"21067"	"21067"	"21049"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.9"	""	"20.1"	""	"20.5"	""	"25.9"	""	"34.6"	"35.3"	"NoQuanLabels"	"507"	"26"	"34.000"	"27.000"	"0.0666772935945479"	"15"	"0.002937"	"0.02732"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAHLQWMVVR"	"[M].sAHLQWmVVR.[N]"	"N-Term(Prot)(Acetyl); M7(Oxidation)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"642.82916"	"1284.65105"	"1284.65175"	"-0.55"	"-0.00035"	"6/82"	"6"	"82"	"487966.876098633"	"HCD"	"MS2"	"3.796276"	"10.6"	"100.000"	"64.5533"	"21214"	"21214"	"21191"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.9"	""	"11.1"	""	"20.5"	""	"14.7"	""	"19.7"	"20.0"	"NoQuanLabels"	"495"	"34"	"33.000"	"26.000"	"0.0107293942400913"	"16"	"0.002937"	"0.02762"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAHLQWMVVR"	"[M].sAHLQWmVVR.[N]"	"N-Term(Prot)(Acetyl); M7(Oxidation)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"642.82928"	"1284.65129"	"1284.65175"	"-0.36"	"-0.00023"	"8/82"	"8"	"82"	"673108.848266602"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"64.2424"	"21087"	"21087"	"21070"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.9"	""	"13.2"	""	"16.3"	""	"18.1"	""	"28.0"	"30.2"	"NoQuanLabels"	"497"	"42"	"33.000"	"26.000"	"0.00158243686945617"	"22"	"0.001886"	"0.0213"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAHLQWMVVR"	"[M].sAHLQWmVVR.[N]"	"N-Term(Prot)(Acetyl); M7(Oxidation)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"2"	"2"	"0.9767"	"0.0000"	"1"	"1"	"1"	"642.83008"	"1284.65288"	"1284.65175"	"0.88"	"0.00056"	"8/82"	"8"	"82"	"503980.813049316"	"HCD"	"MS2"	"0"	"10.1"	"100.000"	"64.4504"	"21186"	"21186"	"21167"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.5"	""	"14.4"	""	"17.6"	""	"14.9"	""	"18.1"	"20.5"	"NoQuanLabels"	"498"	"43"	"33.000"	"26.000"	"0.00134029175846556"	"16"	"0.001812"	"0.02069"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSEPQPQR"	"[R].lTSEPQPQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"642.85870"	"1284.71013"	"1284.71093"	"-0.62"	"-0.00040"	"6/74"	"6"	"74"	"3113661.48699951"	"HCD"	"MS2"	"28.23604"	"151.5"	"100.000"	"31.6932"	"7902"	"7902"	"7881"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"194.4"	""	"178.8"	""	"208.7"	""	"219.3"	""	"321.4"	"316.5"	""	"518"	"23"	"34.000"	"27.000"	"0.129211082252143"	"18"	"0.001374"	"0.01687"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSEPQPQR"	"[R].lTSEPQPQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"642.85876"	"1284.71025"	"1284.71093"	"-0.53"	"-0.00034"	"7/74"	"7"	"74"	"2355656.66571045"	"HCD"	"MS2"	"37.77788"	"112.3"	"100.000"	"31.6938"	"7893"	"7893"	"7869"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"143.3"	""	"129.2"	""	"147.8"	""	"183.0"	""	"245.1"	"218.3"	""	"518"	"26"	"34.000"	"27.000"	"0.0608554900599712"	"21"	"0.000936"	"0.01241"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENIGPELQR"	"[R].eNIGPELQR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"642.85907"	"1284.71086"	"1284.71093"	"-0.05"	"-0.00003"	"6/88"	"6"	"88"	"3034310.21533203"	"HCD"	"MS2"	"0"	"162.1"	"100.000"	"45.7629"	"13599"	"13599"	"13581"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"163.3"	""	"157.4"	""	"151.4"	""	"305.1"	""	"382.7"	"389.5"	""	"542"	"32"	"34.000"	"27.000"	"0.0181957219142933"	"24"	"0.0002479"	"0.005367"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENIGPELQR"	"[R].eNIGPELQR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"642.85950"	"1284.71172"	"1284.71093"	"0.61"	"0.00039"	"5/88"	"5"	"88"	"7076489.39196777"	"HCD"	"MS2"	"0"	"335.3"	"100.000"	"45.3256"	"13433"	"13433"	"13415"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"332.4"	""	"295.6"	""	"266.5"	""	"631.5"	""	"839.0"	"837.8"	""	"525"	"32"	"34.000"	"27.000"	"0.0151750212444001"	""	"0"	"0.001588"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENIGPELQR"	"[R].eNIGPELQR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"642.85999"	"1284.71269"	"1284.71093"	"1.37"	"0.00088"	"6/88"	"6"	"88"	"6578006.05932617"	"HCD"	"MS2"	"0"	"321.4"	"100.000"	"45.4684"	"13480"	"13480"	"13463"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"307.3"	""	"303.0"	""	"267.6"	""	"598.9"	""	"791.6"	"798.9"	""	"549"	"30"	"34.000"	"27.000"	"0.0246912086129994"	"25"	"0"	"0.001827"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPLGPAEK"	"[K].dPLGPAEk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BNI5"	"Olfactomedin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Olfml3 PE=2 SV=2"	"B0BNI5"	"Olfactomedin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Olfml3 PE=2 SV=2"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"642.88165"	"1284.75603"	"1284.75637"	"-0.27"	"-0.00017"	"7/68"	"7"	"68"	"1500660.44238281"	"HCD"	"MS2"	"45.43262"	"96.5"	"100.000"	"50.9720"	"15722"	"15722"	"15698"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"135.7"	""	"125.6"	""	"125.6"	""	"152.4"	""	"183.6"	"192.5"	""	"478"	"19"	"33.000"	"26.000"	"0.2718929213118"	"20"	"0.004942"	"0.05288"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPLGPAEK"	"[K].dPLGPAEk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BNI5"	"Olfactomedin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Olfml3 PE=2 SV=2"	"B0BNI5"	"Olfactomedin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Olfml3 PE=2 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"642.88165"	"1284.75603"	"1284.75637"	"-0.27"	"-0.00017"	"7/68"	"7"	"68"	"1624636.9208374"	"HCD"	"MS2"	"44.10447"	"99.2"	"100.000"	"50.6353"	"15596"	"15596"	"15572"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"145.8"	""	"114.9"	""	"128.1"	""	"145.3"	""	"191.9"	"217.2"	""	"478"	"22"	"33.000"	"26.000"	"0.143350067225067"	"22"	"0.0003538"	"0.00621"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTYMEEER"	"[K].vTYMEEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"643.31842"	"1285.62956"	"1285.62957"	"0.00"	"0.00000"	"6/66"	"6"	"66"	"2825302.29473877"	"HCD"	"MS2"	"12.54849"	"143.2"	"100.000"	"44.2321"	"12992"	"12992"	"12976"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"241.7"	""	"204.1"	""	"212.4"	""	"174.4"	""	"251.8"	"272.1"	""	"393"	"29"	"32.000"	"25.000"	"0.022457559278619"	"20"	"0.0001301"	"0.003953"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTYMEEER"	"[K].vTYMEEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"643.31873"	"1285.63017"	"1285.62957"	"0.47"	"0.00030"	"6/66"	"6"	"66"	"2182976.26391602"	"HCD"	"MS2"	"3.959479"	"116.8"	"100.000"	"44.3147"	"13011"	"13011"	"12987"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"203.3"	""	"157.6"	""	"162.8"	""	"134.6"	""	"225.3"	"223.7"	""	"393"	"32"	"32.000"	"25.000"	"0.012228200603574"	"16"	"0.0001301"	"0.005"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDFLIYDR"	"[K].dDFLIYDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P25236"	"Selenoprotein P OS=Rattus norvegicus OX=10116 GN=Selenop PE=1 SV=2"	"P25236"	"Selenoprotein P OS=Rattus norvegicus OX=10116 GN=Selenop PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"643.33423"	"1285.66118"	"1285.66258"	"-1.09"	"-0.00070"	"5/68"	"5"	"68"	"180250.814208984"	"HCD"	"MS2"	"27.81329"	"12.1"	"100.000"	"83.5502"	"28899"	"28899"	"28880"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.8"	""	"14.0"	""	"16.7"	""	"22.6"	""	"20.3"	"24.7"	""	"512"	"16"	"34.000"	"27.000"	"0.640088412594286"	"17"	"0.007413"	"0.08827"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDFLIYDR"	"[K].dDFLIYDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P25236"	"Selenoprotein P OS=Rattus norvegicus OX=10116 GN=Selenop PE=1 SV=2"	"P25236"	"Selenoprotein P OS=Rattus norvegicus OX=10116 GN=Selenop PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"643.33435"	"1285.66142"	"1285.66258"	"-0.90"	"-0.00058"	"6/68"	"6"	"68"	"194996.637084961"	"HCD"	"MS2"	"19.51398"	"13.7"	"100.000"	"83.5799"	"28908"	"28908"	"28886"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.5"	""	"19.2"	""	"19.3"	""	"24.4"	""	"28.2"	"23.1"	""	"510"	"18"	"34.000"	"27.000"	"0.451377784370943"	"14"	"0.005309"	"0.05962"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDFLIYDR"	"[K].dDFLIYDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P25236"	"Selenoprotein P OS=Rattus norvegicus OX=10116 GN=Selenop PE=1 SV=2"	"P25236"	"Selenoprotein P OS=Rattus norvegicus OX=10116 GN=Selenop PE=1 SV=2"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"643.33472"	"1285.66216"	"1285.66258"	"-0.33"	"-0.00021"	"7/68"	"7"	"68"	"385263.930297852"	"HCD"	"MS2"	"3.650912"	"21.9"	"100.000"	"83.8303"	"29009"	"29009"	"28994"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.6"	""	"20.2"	""	"23.0"	""	"44.3"	""	"50.4"	"48.3"	""	"510"	"22"	"34.000"	"27.000"	"0.151544500446971"	"21"	"0.002547"	"0.02531"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDFLIYDR"	"[K].dDFLIYDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P25236"	"Selenoprotein P OS=Rattus norvegicus OX=10116 GN=Selenop PE=1 SV=2"	"P25236"	"Selenoprotein P OS=Rattus norvegicus OX=10116 GN=Selenop PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"643.33508"	"1285.66289"	"1285.66258"	"0.24"	"0.00015"	"6/68"	"6"	"68"	"317526.987548828"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"83.8901"	"29031"	"29031"	"29012"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.6"	""	"19.2"	""	"23.0"	""	"34.6"	""	"40.0"	"44.0"	""	"518"	"35"	"34.000"	"27.000"	"0.00769661502220148"	"25"	"0"	"0.002483"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPDSLELIR"	"[K].nPDSLELIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"643.36890"	"1285.73052"	"1285.73133"	"-0.63"	"-0.00041"	"7/86"	"7"	"86"	"1851939.69885254"	"HCD"	"MS2"	"10.38712"	"84.1"	"100.000"	"70.0516"	"23449"	"23449"	"23433"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"114.0"	""	"105.8"	""	"126.6"	""	"135.9"	"0.4"	"156.5"	"158.3"	""	"596"	"30"	"34.000"	"27.000"	"0.0319312752960807"	""	"0"	"0.002844"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPDSLELIR"	"[K].nPDSLELIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"643.36890"	"1285.73052"	"1285.73133"	"-0.63"	"-0.00041"	"7/86"	"7"	"86"	"1744864.112854"	"HCD"	"MS2"	"7.638061"	"82.4"	"100.000"	"69.9158"	"23408"	"23408"	"23390"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"118.4"	""	"113.5"	""	"113.1"	""	"119.3"	""	"157.2"	"165.6"	""	"596"	"28"	"34.000"	"27.000"	"0.0429750374754411"	""	"0"	"0.003078"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENVNLAQIR"	"[R].eNVNLAQIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"643.37384"	"1285.74040"	"1285.74256"	"-1.68"	"-0.00108"	"6/78"	"6"	"78"	"1409270.51843262"	"HCD"	"MS2"	"0"	"80.5"	"100.000"	"54.9016"	"17334"	"17334"	"17314"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"124.7"	""	"97.6"	""	"98.6"	""	"134.4"	""	"149.2"	"159.4"	""	"568"	"43"	"34.000"	"27.000"	"0.00138458091189362"	"23"	"0"	"0.0004864"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENVNLAQIR"	"[R].eNVNLAQIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"643.37402"	"1285.74077"	"1285.74256"	"-1.40"	"-0.00090"	"6/78"	"6"	"78"	"1360875.57751465"	"HCD"	"MS2"	"10.39705"	"73.3"	"100.000"	"55.1037"	"17402"	"17402"	"17386"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"124.8"	""	"73.8"	""	"90.2"	""	"110.9"	""	"150.8"	"144.7"	""	"560"	"43"	"34.000"	"27.000"	"0.00127396656842013"	"27"	"0"	"0.0003826"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGYGGGFNER"	"[R].tGYGGGFNER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O35986"	"Zinc finger Ran-binding domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Zranb2 PE=1 SV=2"	"O35986"	"Zinc finger Ran-binding domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Zranb2 PE=1 SV=2"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"643.81934"	"1286.63140"	"1286.63268"	"-1.00"	"-0.00064"	"8/92"	"8"	"92"	"665951.327697754"	"HCD"	"MS2"	"13.47284"	"52.3"	"100.000"	"37.0022"	"10048"	"10048"	"10018"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.7"	""	"80.4"	""	"76.1"	""	"93.8"	"1.9"	"102.7"	"77.1"	""	"430"	"39"	"33.000"	"26.000"	"0.00270668963535746"	"19"	"0"	"0.001047"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDLTEYR"	"[K].nFDLTEYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P70569"	"Unconventional myosin-Vb OS=Rattus norvegicus OX=10116 GN=Myo5b PE=1 SV=1"	"P70569"	"Unconventional myosin-Vb OS=Rattus norvegicus OX=10116 GN=Myo5b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"643.83344"	"1286.65959"	"1286.65783"	"1.37"	"0.00088"	"7/76"	"7"	"76"	"366738.74987793"	"HCD"	"MS2"	"39.38436"	"24.4"	"100.000"	"72.0732"	"24287"	"24287"	"24262"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.9"	""	"31.2"	""	"34.3"	""	"36.2"	"0.5"	"44.5"	"50.5"	""	"552"	"16"	"34.000"	"27.000"	"0.642553187115542"	"14"	"0.00736"	"0.08625"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGGQGQLDVR"	"[R].gAGGQGQLDVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.8852"	"0.0000"	"1"	"1"	"1"	"643.85315"	"1286.69902"	"1286.70143"	"-1.87"	"-0.00120"	"7/92"	"7"	"92"	"1059997.57513428"	"HCD"	"MS2"	"0"	"70.7"	"100.000"	"30.5722"	"7450"	"7450"	"7426"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"122.3"	""	"87.3"	""	"104.9"	""	"89.2"	""	"126.8"	"143.6"	""	"657"	"61"	"35.000"	"28.000"	"2.4073285913613E-05"	"24"	"0"	"2.112E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGGQGQLDVR"	"[R].gAGGQGQLDVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.9016"	"0.0000"	"1"	"1"	"1"	"643.85468"	"1286.70207"	"1286.70143"	"0.50"	"0.00032"	"7/92"	"7"	"92"	"807148.723205566"	"HCD"	"MS2"	"0"	"53.6"	"100.000"	"30.6620"	"7475"	"7475"	"7450"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.2"	""	"67.3"	""	"79.3"	""	"68.3"	""	"84.1"	"119.7"	""	"683"	"61"	"35.000"	"28.000"	"2.46825887930141E-05"	"22"	"0"	"6.236E-05"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQNVVDDR"	"[K].vLQNVVDDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"0"	"2"	"2"	"0.6327"	"0.0000"	"1"	"1"	"1"	"643.86530"	"1286.72331"	"1286.72658"	"-2.54"	"-0.00163"	"6/78"	"6"	"78"	"2415292.85467529"	"HCD"	"MS2"	"0"	"90.5"	"100.000"	"59.8626"	"19342"	"19342"	"19328"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"110.4"	""	"70.3"	""	"90.6"	""	"189.6"	"1.3"	"204.0"	"194.4"	""	"655"	"49"	"35.000"	"28.000"	"0.000413248517578445"	""	"0"	"0.0005418"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQNVVDDR"	"[K].vLQNVVDDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"643.86542"	"1286.72356"	"1286.72658"	"-2.35"	"-0.00151"	"8/78"	"8"	"78"	"2310145.63146973"	"HCD"	"MS2"	"17.04939"	"86.4"	"100.000"	"59.6052"	"19251"	"19251"	"19243"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"115.8"	""	"77.8"	""	"94.7"	""	"165.7"	"2.0"	"175.0"	"190.1"	""	"657"	"32"	"35.000"	"28.000"	"0.0192103542641462"	""	"0"	"0.0007311"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQAAELADR"	"[R].iAQAAELADR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"643.86584"	"1286.72441"	"1286.72658"	"-1.68"	"-0.00108"	"7/92"	"7"	"92"	"1121137.48260498"	"HCD"	"MS2"	"10.10712"	"54.9"	"100.000"	"59.3021"	"19129"	"19129"	"19110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.7"	""	"46.8"	""	"60.0"	""	"100.8"	""	"123.7"	"137.6"	""	"656"	"49"	"35.000"	"28.000"	"0.00039525178844195"	""	"0"	"0.0002333"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQNVVDDR"	"[K].vLQNVVDDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"643.86603"	"1286.72478"	"1286.72658"	"-1.40"	"-0.00090"	"7/78"	"7"	"78"	"866967.145874023"	"HCD"	"MS2"	"0"	"34.6"	"100.000"	"59.8974"	"19351"	"19351"	"19338"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.6"	""	"30.0"	""	"41.6"	""	"63.4"	""	"74.3"	"71.1"	""	"650"	"40"	"35.000"	"28.000"	"0.00327252792376836"	"23"	"0"	"0.000993"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQAAELADR"	"[R].iAQAAELADR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.7551"	"0.0000"	"1"	"1"	"1"	"643.86639"	"1286.72551"	"1286.72658"	"-0.83"	"-0.00053"	"9/92"	"9"	"92"	"1674363.79150391"	"HCD"	"MS2"	"8.020364"	"73.5"	"100.000"	"59.5804"	"19228"	"19228"	"19206"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.3"	""	"67.1"	""	"73.9"	""	"134.8"	""	"173.6"	"175.6"	""	"652"	"49"	"35.000"	"28.000"	"0.000421907844312695"	"27"	"0"	"5.949E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPLTATPGGR"	"[R].sTPLTATPGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P58200"	"Vesicle transport through interaction with t-SNAREs homolog 1B OS=Rattus norvegicus OX=10116 GN=Vti1b PE=1 SV=2"	"P58200"	"Vesicle transport through interaction with t-SNAREs homolog 1B OS=Rattus norvegicus OX=10116 GN=Vti1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"643.86774"	"1286.72820"	"1286.72658"	"1.26"	"0.00081"	"6/92"	"6"	"92"	"591026.944091797"	"HCD"	"MS2"	"38.30026"	"39.3"	"100.000"	"36.7310"	"9937"	"9937"	"9912"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.6"	""	"49.6"	""	"53.9"	""	"70.5"	""	"74.2"	"78.9"	""	"666"	"26"	"35.000"	"28.000"	"0.0890111134084882"	"14"	"0.001374"	"0.01727"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HESGASIK"	"[R].hESGASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"429.58655"	"1286.74509"	"1286.74687"	"-1.38"	"-0.00059"	"6/64"	"6"	"64"	"14763749.5220337"	"HCD"	"MS2"	"13.36412"	"537.8"	"84.828"	"22.9338"	"4344"	"4344"	"4329"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"755.8"	""	"639.6"	""	"631.4"	""	"1025.2"	""	"1009.4"	"1043.4"	""	"637"	"29"	"35.000"	"28.000"	"0.0376798735498465"	"20"	"0"	"0.002766"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HESGASIK"	"[R].hESGASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"429.58658"	"1286.74518"	"1286.74687"	"-1.31"	"-0.00056"	"6/64"	"6"	"64"	"15848068.3245239"	"HCD"	"MS2"	"14.26556"	"513.4"	"74.956"	"22.9061"	"4350"	"4350"	"4326"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"733.7"	""	"625.0"	""	"596.0"	""	"924.6"	""	"958.1"	"1040.4"	""	"637"	"28"	"35.000"	"28.000"	"0.0497862524181144"	"16"	"0.0002479"	"0.005434"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HESGASIK"	"[R].hESGASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"643.87634"	"1286.74541"	"1286.74687"	"-1.14"	"-0.00073"	"7/64"	"7"	"64"	"939130.081298828"	"HCD"	"MS2"	"0"	"77.0"	"100.000"	"22.9521"	"4352"	"4352"	"4329"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"110.5"	""	"94.2"	""	"86.4"	""	"150.5"	""	"152.9"	"140.3"	""	"637"	"38"	"35.000"	"28.000"	"0.00511810789084601"	"27"	"0"	"0.002508"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAVSEGTK"	"[K].hAVSEGTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q00729"	"Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"Q00715; Q00729"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"643.87689"	"1286.74651"	"1286.74687"	"-0.28"	"-0.00018"	"12/62"	"12"	"62"	"3465138.1529541"	"HCD"	"MS2"	"0"	"243.6"	"100.000"	"20.9040"	"3536"	"3536"	"3520"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"177.4"	""	"173.9"	""	"177.4"	""	"434.0"	"0.1"	"677.3"	"689.5"	""	"630"	"39"	"34.000"	"27.000"	"0.0042492330801637"	"22"	"0.0001301"	"0.003852"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAVSEGTK"	"[K].hAVSEGTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q00729"	"Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"Q00715; Q00729"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"643.87689"	"1286.74651"	"1286.74687"	"-0.28"	"-0.00018"	"7/62"	"7"	"62"	"3371511.23156738"	"HCD"	"MS2"	"0"	"237.0"	"100.000"	"20.9778"	"3549"	"3549"	"3529"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"179.0"	""	"161.6"	""	"156.2"	""	"446.1"	""	"660.7"	"667.2"	""	"630"	"37"	"34.000"	"27.000"	"0.00577179043046931"	"25"	"0"	"0.003625"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HESGASIK"	"[R].hESGASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"643.87720"	"1286.74712"	"1286.74687"	"0.19"	"0.00012"	"12/64"	"12"	"64"	"1364520.68566895"	"HCD"	"MS2"	"24.68853"	"110.7"	"100.000"	"22.8763"	"4338"	"4338"	"4310"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"163.9"	""	"135.9"	""	"131.8"	""	"208.9"	""	"203.7"	"206.4"	""	"631"	"39"	"34.000"	"28.000"	"0.00420726011847529"	"27"	"0"	"0.001705"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLETVPLER"	"[K].tLETVPLER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"643.87885"	"1286.75041"	"1286.75173"	"-1.02"	"-0.00066"	"7/78"	"7"	"78"	"4644139.90734863"	"HCD"	"MS2"	"0"	"172.6"	"100.000"	"61.8868"	"20148"	"20148"	"20133"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"159.7"	""	"128.6"	""	"123.7"	""	"418.2"	""	"415.5"	"400.3"	""	"697"	"50"	"35.000"	"28.000"	"0.000325988877440422"	"26"	"0"	"0.0005789"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLETVPLER"	"[K].tLETVPLER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"643.87897"	"1286.75066"	"1286.75173"	"-0.84"	"-0.00054"	"7/78"	"7"	"78"	"4003156.22186279"	"HCD"	"MS2"	"0"	"171.2"	"100.000"	"62.0288"	"20190"	"20190"	"20173"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"166.2"	""	"132.5"	""	"131.1"	""	"401.8"	""	"420.8"	"382.0"	""	"691"	"50"	"35.000"	"28.000"	"0.000336084165814942"	"26"	"0"	"0.0003019"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"QSLTADPVVK"	"[K].QSLTADPVVk.[T]"	"K10(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"643.87933"	"1286.75139"	"1286.75173"	"-0.27"	"-0.00017"	"5/98"	"5"	"98"	"1327223.94897461"	"HCD"	"MS2"	"49.85434"	"35.0"	"100.000"	"75.8309"	"25805"	"25805"	"25777"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.2"	""	"53.4"	""	"56.6"	""	"43.8"	"0.6"	"61.0"	"59.4"	""	"692"	"32"	"35.000"	"28.000"	"0.0237178926352621"	"24"	"0.005874"	"0.06632"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLETVPLER"	"[K].tLETVPLER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"643.87933"	"1286.75139"	"1286.75173"	"-0.27"	"-0.00017"	"7/78"	"7"	"78"	"1504937.61621094"	"HCD"	"MS2"	"0"	"72.0"	"100.000"	"61.6027"	"20034"	"20034"	"20017"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.4"	""	"67.3"	""	"63.0"	""	"172.8"	"0.2"	"162.9"	"143.7"	""	"692"	"47"	"35.000"	"28.000"	"0.000673094588241442"	"23"	"0"	"0.001275"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLETVPLER"	"[K].tLETVPLER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"643.87952"	"1286.75176"	"1286.75173"	"0.02"	"0.00001"	"5/78"	"5"	"78"	"334844.510437012"	"HCD"	"MS2"	"0"	"18.9"	"100.000"	"62.3175"	"20304"	"20304"	"20284"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.5"	""	"22.9"	""	"19.2"	""	"36.3"	"1.0"	"37.9"	"40.0"	""	"691"	"24"	"35.000"	"28.000"	"0.135346818540739"	"19"	"0.001728"	"0.02017"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLETVPLER"	"[K].tLETVPLER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"643.87958"	"1286.75188"	"1286.75173"	"0.11"	"0.00007"	"6/78"	"6"	"78"	"1270751.49560547"	"HCD"	"MS2"	"0"	"59.7"	"100.000"	"61.7289"	"20069"	"20069"	"20049"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.1"	""	"53.1"	""	"41.3"	""	"144.0"	""	"140.4"	"134.4"	""	"691"	"36"	"35.000"	"28.000"	"0.00791494774031267"	"24"	"0.001036"	"0.01354"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEPLGDK"	"[R].aVEPLGDk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.7292"	"0.0000"	"1"	"1"	"1"	"643.88879"	"1286.77031"	"1286.77202"	"-1.33"	"-0.00086"	"7/64"	"7"	"64"	"3540479.87310791"	"HCD"	"MS2"	"4.319323"	"222.7"	"100.000"	"52.8132"	"16473"	"16473"	"16455"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"252.1"	""	"173.8"	""	"252.6"	""	"455.0"	""	"435.2"	"555.9"	""	"661"	"48"	"35.000"	"28.000"	"0.000536008237177126"	""	"0"	"0.001918"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEPLGDK"	"[R].aVEPLGDk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"643.88885"	"1286.77043"	"1286.77202"	"-1.24"	"-0.00079"	"7/64"	"7"	"64"	"3882008.40710449"	"HCD"	"MS2"	"4.902786"	"245.0"	"100.000"	"52.5088"	"16361"	"16361"	"16344"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"268.6"	""	"193.9"	""	"270.0"	""	"492.7"	""	"502.3"	"604.0"	""	"661"	"50"	"35.000"	"28.000"	"0.000300726336604959"	""	"0"	"0.001598"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEPLGDK"	"[R].aVEPLGDk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"643.88898"	"1286.77068"	"1286.77202"	"-1.05"	"-0.00067"	"7/64"	"7"	"64"	"1421539.87854004"	"HCD"	"MS2"	"0"	"97.8"	"100.000"	"52.2144"	"16240"	"16240"	"16220"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.7"	""	"92.7"	""	"110.7"	""	"207.3"	""	"182.4"	"223.7"	""	"661"	"50"	"35.000"	"28.000"	"0.000320015831494343"	""	"0"	"0.001595"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDPVQK"	"[K].eLDPVQk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21571"	"ATP synthase-coupling factor 6, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pf PE=1 SV=1"	"P21571"	"ATP synthase-coupling factor 6, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pf PE=1 SV=1"	"0"	"2"	"2"	"0.3226"	"0.0000"	"1"	"1"	"1"	"643.88916"	"1286.77104"	"1286.77202"	"-0.76"	"-0.00049"	"6/54"	"6"	"54"	"1431576.42297363"	"HCD"	"MS2"	"6.421072"	"97.5"	"100.000"	"53.4362"	"16739"	"16739"	"16716"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"108.3"	""	"116.0"	""	"111.0"	""	"179.6"	""	"240.7"	"177.5"	""	"652"	"31"	"35.000"	"28.000"	"0.0264982748269496"	""	"0.002973"	"0.0296"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDPVQK"	"[K].eLDPVQk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21571"	"ATP synthase-coupling factor 6, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pf PE=1 SV=1"	"P21571"	"ATP synthase-coupling factor 6, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pf PE=1 SV=1"	"0"	"2"	"2"	"0.0741"	"0.0000"	"1"	"1"	"1"	"643.88953"	"1286.77178"	"1286.77202"	"-0.19"	"-0.00012"	"10/54"	"10"	"54"	"1454352.78131104"	"HCD"	"MS2"	"5.602248"	"104.4"	"100.000"	"53.7083"	"16839"	"16839"	"16817"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"120.9"	""	"114.7"	""	"116.5"	""	"214.4"	""	"234.1"	"192.7"	""	"650"	"27"	"35.000"	"28.000"	"0.0683727992924105"	""	"0.003581"	"0.03711"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEPLGDK"	"[R].aVEPLGDk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"643.88971"	"1286.77214"	"1286.77202"	"0.09"	"0.00006"	"7/64"	"7"	"64"	"1417017.89111328"	"HCD"	"MS2"	"11.52595"	"102.7"	"100.000"	"52.5119"	"16350"	"16350"	"16332"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"117.8"	""	"95.5"	""	"118.9"	""	"218.9"	"0.2"	"179.7"	"244.0"	""	"651"	"48"	"35.000"	"28.000"	"0.000481449780348752"	"28"	"0"	"0.001096"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLQEPK"	"[K].dVLQEPk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"643.88971"	"1286.77214"	"1286.77202"	"0.09"	"0.00006"	"9/62"	"9"	"62"	"2270627.6763916"	"HCD"	"MS2"	"29.74146"	"131.2"	"100.000"	"50.9944"	"15742"	"15742"	"15726"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.5"	"2.5"	"128.5"	""	"133.5"	""	"271.1"	""	"305.9"	"296.2"	""	"651"	"21"	"35.000"	"28.000"	"0.249201695549614"	"25"	"0.00413"	"0.0451"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLQEPK"	"[K].dVLQEPk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"643.89001"	"1286.77275"	"1286.77202"	"0.57"	"0.00036"	"9/62"	"9"	"62"	"2448744.61352539"	"HCD"	"MS2"	"28.65823"	"151.4"	"100.000"	"51.3842"	"15890"	"15890"	"15869"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"138.6"	""	"144.9"	""	"140.4"	""	"329.1"	""	"359.1"	"333.2"	""	"628"	"22"	"34.000"	"27.000"	"0.214748257246369"	"26"	"0.004817"	"0.05065"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TETEFYLR"	"[K].tETEFYLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZV0"	"Beta-mannosidase OS=Rattus norvegicus OX=10116 GN=Manba PE=2 SV=1"	"Q4FZV0"	"Beta-mannosidase OS=Rattus norvegicus OX=10116 GN=Manba PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"644.34155"	"1287.67583"	"1287.67823"	"-1.87"	"-0.00120"	"6/62"	"6"	"62"	"1121554.68280029"	"HCD"	"MS2"	"16.60683"	"58.8"	"100.000"	"63.8030"	"20923"	"20923"	"20901"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.9"	""	"76.0"	""	"84.3"	""	"106.7"	"0.1"	"99.8"	"107.9"	""	"630"	"30"	"34.000"	"27.000"	"0.0293298980772366"	"20"	"0.0006732"	"0.008222"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYTLDVYR"	"[K].eYTLDVYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"644.34155"	"1287.67583"	"1287.67823"	"-1.87"	"-0.00120"	"6/64"	"6"	"64"	"1541423.88256836"	"HCD"	"MS2"	"45.25021"	"92.3"	"100.000"	"67.2395"	"22318"	"22318"	"22300"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"134.6"	""	"114.4"	""	"114.6"	""	"157.5"	""	"185.0"	"175.4"	""	"630"	"26"	"34.000"	"27.000"	"0.078579733898703"	"21"	"0.0007829"	"0.009359"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TETEFYLR"	"[K].tETEFYLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZV0"	"Beta-mannosidase OS=Rattus norvegicus OX=10116 GN=Manba PE=2 SV=1"	"Q4FZV0"	"Beta-mannosidase OS=Rattus norvegicus OX=10116 GN=Manba PE=2 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"644.34192"	"1287.67656"	"1287.67823"	"-1.30"	"-0.00084"	"6/62"	"6"	"62"	"1039278.67614746"	"HCD"	"MS2"	"30.10783"	"59.1"	"100.000"	"63.8944"	"20946"	"20946"	"20919"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.6"	""	"75.8"	""	"83.4"	""	"93.6"	"0.3"	"110.1"	"118.5"	""	"638"	"29"	"35.000"	"28.000"	"0.0386180804602604"	"19"	"0.000936"	"0.01191"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYTLDVYR"	"[K].eYTLDVYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"644.34253"	"1287.67778"	"1287.67823"	"-0.35"	"-0.00023"	"6/64"	"6"	"64"	"1524516.86120605"	"HCD"	"MS2"	"48.60295"	"85.8"	"100.000"	"67.2988"	"22327"	"22327"	"22306"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"123.1"	""	"114.3"	""	"121.6"	""	"146.8"	"0.1"	"164.5"	"142.3"	""	"639"	"24"	"35.000"	"28.000"	"0.115204876445415"	"19"	"0.0004639"	"0.007978"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TETEFYLR"	"[K].tETEFYLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZV0"	"Beta-mannosidase OS=Rattus norvegicus OX=10116 GN=Manba PE=2 SV=1"	"Q4FZV0"	"Beta-mannosidase OS=Rattus norvegicus OX=10116 GN=Manba PE=2 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"644.34271"	"1287.67815"	"1287.67823"	"-0.07"	"-0.00004"	"9/62"	"9"	"62"	"471387.770935059"	"HCD"	"MS2"	"0"	"28.5"	"100.000"	"64.1415"	"21061"	"21061"	"21034"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.6"	""	"40.4"	""	"39.5"	""	"35.7"	"1.6"	"61.2"	"50.9"	""	"639"	"24"	"35.000"	"28.000"	"0.133804544055175"	"19"	"0.003653"	"0.03775"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TETEFYLR"	"[K].tETEFYLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZV0"	"Beta-mannosidase OS=Rattus norvegicus OX=10116 GN=Manba PE=2 SV=1"	"Q4FZV0"	"Beta-mannosidase OS=Rattus norvegicus OX=10116 GN=Manba PE=2 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"644.34277"	"1287.67827"	"1287.67823"	"0.03"	"0.00002"	"6/62"	"6"	"62"	"574662.39465332"	"HCD"	"MS2"	"6.535379"	"33.9"	"100.000"	"64.2145"	"21076"	"21076"	"21054"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.6"	""	"50.0"	""	"52.0"	""	"53.0"	"0.8"	"62.3"	"56.7"	""	"639"	"27"	"35.000"	"28.000"	"0.0641905153628489"	"21"	"0.0003538"	"0.006354"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLDQSPELR"	"[R].tLDQSPELR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P42346"	"Serine/threonine-protein kinase mTOR OS=Rattus norvegicus OX=10116 GN=Mtor PE=1 SV=1"	"P42346"	"Serine/threonine-protein kinase mTOR OS=Rattus norvegicus OX=10116 GN=Mtor PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"644.35016"	"1287.69304"	"1287.71060"	"-13.63"	"-0.00878"	"8/86"	"8"	"86"	"1272119.63586426"	"HCD"	"MS2"	"43.08722"	"76.5"	"100.000"	"45.1094"	"13345"	"13345"	"13319"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"109.2"	""	"109.2"	""	"111.8"	""	"115.2"	""	"135.3"	"144.8"	""	"656"	"19"	"35.000"	"28.000"	"0.462246725882375"	"17"	"0.003922"	"0.04046"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVIQDLER"	"[K].dAVIQDLER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"644.35883"	"1287.71037"	"1287.71060"	"-0.17"	"-0.00011"	"13/86"	"13"	"86"	"477339.792358398"	"HCD"	"MS2"	"45.0402"	"32.3"	"100.000"	"67.4748"	"22414"	"22414"	"22392"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.3"	""	"42.7"	""	"44.0"	""	"56.7"	"2.5"	"55.5"	"57.2"	""	"785"	"35"	"35.000"	"28.000"	"0.0134226931186631"	"27"	"0"	"0.002985"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVIQDLER"	"[K].dAVIQDLER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"644.35907"	"1287.71086"	"1287.71060"	"0.21"	"0.00013"	"8/86"	"8"	"86"	"552977.28729248"	"HCD"	"MS2"	"52.24422"	"35.4"	"100.000"	"67.5619"	"22434"	"22434"	"22414"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.1"	""	"42.1"	""	"45.1"	""	"57.8"	"1.3"	"70.0"	"68.5"	""	"785"	"30"	"35.000"	"28.000"	"0.0440392243313521"	"23"	"0"	"0.0013"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSEPESIR"	"[R].lQSEPESIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"644.36017"	"1287.71306"	"1287.71060"	"1.91"	"0.00123"	"8/86"	"8"	"86"	"5098047.00274658"	"HCD"	"MS2"	"7.510161"	"208.8"	"100.000"	"42.0612"	"12109"	"12109"	"12092"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"219.1"	""	"189.9"	""	"209.1"	""	"400.1"	"3.4"	"418.2"	"546.6"	""	"780"	"26"	"35.000"	"28.000"	"0.091004864428959"	"20"	"0"	"0.003608"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSEPESIR"	"[R].lQSEPESIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"644.36072"	"1287.71416"	"1287.71060"	"2.77"	"0.00178"	"8/86"	"8"	"86"	"5163059.50531006"	"HCD"	"MS2"	"12.78273"	"206.3"	"100.000"	"42.1811"	"12147"	"12147"	"12129"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"201.5"	""	"198.1"	""	"224.8"	""	"410.1"	""	"388.5"	"540.4"	""	"773"	"27"	"35.000"	"28.000"	"0.0719696678320198"	"18"	"0.000936"	"0.01163"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQPPSTGK"	"[K].dQPPSTGk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"644.36798"	"1287.72869"	"1287.73089"	"-1.71"	"-0.00110"	"6/78"	"6"	"78"	"497491.940673828"	"HCD"	"MS2"	"0"	"38.2"	"100.000"	"28.9396"	"6787"	"6787"	"6758"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.5"	""	"43.4"	""	"47.6"	""	"58.5"	"0.4"	"73.9"	"86.0"	""	"747"	"18"	"35.000"	"28.000"	"0.587882599878134"	"21"	"0.007627"	"0.09292"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAVDGDPK"	"[R].qAVDGDPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"644.36810"	"1287.72893"	"1287.73089"	"-1.52"	"-0.00098"	"6/74"	"6"	"74"	"1671209.07122803"	"HCD"	"MS2"	"25.70502"	"121.1"	"100.000"	"31.5001"	"7823"	"7823"	"7804"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"148.7"	""	"116.4"	""	"128.5"	""	"228.8"	"1.1"	"270.1"	"257.5"	""	"747"	"33"	"35.000"	"28.000"	"0.0208588617734206"	""	"0.0002479"	"0.006008"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAVDGDPK"	"[R].qAVDGDPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"644.36853"	"1287.72978"	"1287.73089"	"-0.86"	"-0.00055"	"6/74"	"6"	"74"	"4922061.64953613"	"HCD"	"MS2"	"41.12099"	"269.1"	"100.000"	"31.1484"	"7680"	"7680"	"7659"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"346.3"	""	"313.4"	""	"263.3"	""	"506.1"	"0.9"	"545.0"	"580.7"	""	"743"	"34"	"35.000"	"28.000"	"0.0143866215088381"	""	"0.0001301"	"0.005005"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAVDGDPK"	"[R].qAVDGDPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"3"	"3"	"0.4211"	"0.0000"	"1"	"1"	"1"	"429.91483"	"1287.72992"	"1287.73089"	"-0.75"	"-0.00032"	"6/74"	"6"	"74"	"3913235.5635376"	"HCD"	"MS2"	"35.347"	"205.5"	"100.000"	"31.3875"	"7777"	"7777"	"7756"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"258.5"	""	"248.8"	""	"244.5"	""	"350.0"	"2.1"	"418.6"	"428.8"	""	"730"	"19"	"35.000"	"28.000"	"0.464828624571081"	"25"	"0.003449"	"0.03512"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAVDGDPK"	"[R].qAVDGDPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"429.91486"	"1287.73001"	"1287.73089"	"-0.68"	"-0.00029"	"5/74"	"5"	"74"	"3767252.15185547"	"HCD"	"MS2"	"58.03345"	"189.3"	"100.000"	"31.4134"	"7778"	"7778"	"7757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"215.9"	""	"232.8"	""	"247.8"	""	"308.0"	"0.0"	"388.8"	"404.6"	""	"730"	"27"	"35.000"	"28.000"	"0.076083917233051"	"26"	"0.001546"	"0.01862"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAVDGDPK"	"[R].qAVDGDPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"1"	"644.36871"	"1287.73015"	"1287.73089"	"-0.57"	"-0.00037"	"6/74"	"6"	"74"	"2248358.33978271"	"HCD"	"MS2"	"16.48029"	"159.8"	"100.000"	"31.4916"	"7810"	"7810"	"7789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"187.4"	""	"161.1"	""	"143.3"	""	"309.9"	""	"344.2"	"375.7"	""	"730"	"36"	"35.000"	"28.000"	"0.00931735975471355"	""	"0.0003538"	"0.00704"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAVDGDPK"	"[R].qAVDGDPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"644.36890"	"1287.73052"	"1287.73089"	"-0.29"	"-0.00019"	"6/74"	"6"	"74"	"5842377.96270752"	"HCD"	"MS2"	"39.69371"	"331.4"	"100.000"	"31.1947"	"7689"	"7689"	"7663"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"408.1"	""	"346.3"	""	"364.3"	""	"617.2"	""	"696.8"	"715.9"	""	"740"	"33"	"35.000"	"28.000"	"0.0195075048726444"	""	"0.0006732"	"0.008716"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQPPSTGK"	"[K].dQPPSTGk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"644.36920"	"1287.73113"	"1287.73089"	"0.19"	"0.00012"	"6/78"	"6"	"78"	"472426.826782227"	"HCD"	"MS2"	"0"	"37.6"	"100.000"	"28.9887"	"6794"	"6794"	"6763"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.4"	""	"41.4"	""	"43.0"	""	"63.3"	"0.2"	"76.8"	"78.2"	""	"742"	"22"	"35.000"	"28.000"	"0.222522489290794"	"24"	"0.006308"	"0.0717"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQGGDGYYGR"	"[K].sQGGDGYYGR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2;Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2; Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"644.80920"	"1288.61113"	"1288.61194"	"-0.63"	"-0.00041"	"7/96"	"7"	"96"	"325910.114440918"	"HCD"	"MS2"	"0"	"25.3"	"100.000"	"25.9682"	"5583"	"5583"	"5559"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.9"	""	"31.3"	""	"31.2"	""	"40.5"	""	"60.3"	"48.3"	""	"262"	"14"	"31.000"	"24.000"	"0.575799516223551"	"13"	"0.006685"	"0.07542"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQGGDGYYGR"	"[K].sQGGDGYYGR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2;Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2; Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"644.80969"	"1288.61211"	"1288.61194"	"0.13"	"0.00008"	"6/96"	"6"	"96"	"339589.320373535"	"HCD"	"MS2"	"28.69767"	"24.0"	"100.000"	"26.0305"	"5593"	"5593"	"5570"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.3"	""	"32.9"	""	"32.9"	""	"35.4"	""	"50.6"	"43.4"	""	"267"	"10"	"31.000"	"24.000"	"1.24017012635122"	"13"	"0.007213"	"0.08301"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQGTQPEPR"	"[R].fQGTQPEPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"644.84558"	"1288.68389"	"1288.68472"	"-0.64"	"-0.00042"	"6/84"	"6"	"84"	"6195508.43432617"	"HCD"	"MS2"	"18.7612"	"291.6"	"100.000"	"34.4618"	"9015"	"9015"	"8999"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"516.9"	""	"423.6"	""	"442.4"	""	"430.5"	"1.7"	"469.6"	"470.7"	""	"737"	"25"	"35.000"	"28.000"	"0.109505893269546"	"19"	"0.0003538"	"0.006378"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQGTQPEPR"	"[R].fQGTQPEPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"644.84589"	"1288.68450"	"1288.68472"	"-0.17"	"-0.00011"	"6/84"	"6"	"84"	"7896261.63232422"	"HCD"	"MS2"	"17.10856"	"380.5"	"100.000"	"34.4171"	"9003"	"9003"	"8983"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"698.5"	""	"510.9"	""	"562.7"	""	"591.2"	""	"623.7"	"613.3"	""	"754"	"28"	"35.000"	"28.000"	"0.0539934838026126"	"20"	"0.0001301"	"0.00459"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPDSGISSIR"	"[R].qPDSGISSIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"644.85559"	"1288.70391"	"1288.70585"	"-1.51"	"-0.00097"	"8/100"	"8"	"100"	"4098246.69549561"	"HCD"	"MS2"	"9.243014"	"241.5"	"100.000"	"40.1981"	"11342"	"11342"	"11320"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"329.4"	""	"319.1"	""	"304.3"	""	"406.6"	""	"475.4"	"461.1"	""	"775"	"26"	"35.000"	"28.000"	"0.0980102973622881"	"24"	"0.0001301"	"0.004218"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPDSGISSIR"	"[R].qPDSGISSIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"644.85590"	"1288.70452"	"1288.70585"	"-1.03"	"-0.00066"	"8/100"	"8"	"100"	"4536469.78796387"	"HCD"	"MS2"	"10.11018"	"175.7"	"100.000"	"40.0272"	"11281"	"11281"	"11262"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"191.0"	""	"169.4"	""	"164.2"	""	"425.1"	""	"372.1"	"348.4"	""	"768"	"26"	"35.000"	"28.000"	"0.0910607502974076"	"25"	"0"	"0.0005438"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEEILSGAQR"	"[R].gEEILSGAQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"644.85602"	"1288.70476"	"1288.70585"	"-0.84"	"-0.00054"	"9/82"	"9"	"82"	"3887640.85974121"	"HCD"	"MS2"	"0"	"178.5"	"100.000"	"43.3448"	"12622"	"12622"	"12602"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"251.5"	""	"283.0"	""	"292.1"	""	"232.3"	"2.2"	"287.6"	"340.1"	""	"763"	"28"	"35.000"	"28.000"	"0.0652370842706944"	"23"	"0"	"0.002206"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEEILSGAQR"	"[R].gEEILSGAQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"644.85645"	"1288.70561"	"1288.70585"	"-0.18"	"-0.00012"	"9/82"	"9"	"82"	"4255820.4463501"	"HCD"	"MS2"	"3.107118"	"183.5"	"100.000"	"43.2153"	"12580"	"12580"	"12562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"272.5"	""	"290.6"	""	"307.3"	""	"216.1"	""	"311.3"	"340.1"	""	"826"	"27"	"36.000"	"29.000"	"0.0755005389266953"	"23"	"0"	"0.001407"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPEIIGPR"	"[K].yDPEIIGPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P70705"	"Copper-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp7a PE=1 SV=1"	"P70705"	"Copper-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp7a PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"644.85809"	"1288.70891"	"1288.70987"	"-0.74"	"-0.00048"	"7/68"	"7"	"68"	"655638.175598145"	"HCD"	"MS2"	"26.14068"	"38.0"	"100.000"	"65.1390"	"21462"	"21462"	"21437"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.2"	""	"49.8"	""	"49.4"	""	"61.3"	"1.6"	"74.2"	"77.3"	""	"805"	"34"	"36.000"	"29.000"	"0.0155871202080951"	"22"	"0"	"0.001792"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPEIIGPR"	"[K].yDPEIIGPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P70705"	"Copper-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp7a PE=1 SV=1"	"P70705"	"Copper-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp7a PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"644.85840"	"1288.70952"	"1288.70987"	"-0.27"	"-0.00017"	"5/68"	"5"	"68"	"619753.050415039"	"HCD"	"MS2"	"10.28587"	"41.1"	"100.000"	"65.2081"	"21474"	"21474"	"21454"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.7"	""	"55.3"	""	"59.1"	""	"69.8"	"0.8"	"72.6"	"83.9"	""	"805"	"22"	"36.000"	"29.000"	"0.226864156469947"	"20"	"0.005119"	"0.05801"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEVTELLAR"	"[K].eEVTELLAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNE2"	"DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Rattus norvegicus OX=10116 GN=Polr2e PE=2 SV=1"	"B0BNE2"	"DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Rattus norvegicus OX=10116 GN=Polr2e PE=2 SV=1"	"0"	"2"	"2"	"0.3696"	"0.0000"	"1"	"1"	"1"	"644.86804"	"1288.72881"	"1288.73100"	"-1.70"	"-0.00109"	"7/72"	"7"	"72"	"418247.879150391"	"HCD"	"MS2"	"47.427"	"22.8"	"100.000"	"77.5613"	"26507"	"26507"	"26483"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.5"	""	"28.4"	""	"22.4"	""	"43.2"	"0.8"	"46.4"	"44.8"	""	"940"	"46"	"36.000"	"29.000"	"0.00127086043113116"	""	"0"	"0.002135"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEVTELLAR"	"[K].eEVTELLAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNE2"	"DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Rattus norvegicus OX=10116 GN=Polr2e PE=2 SV=1"	"B0BNE2"	"DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Rattus norvegicus OX=10116 GN=Polr2e PE=2 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"644.86884"	"1288.73039"	"1288.73100"	"-0.47"	"-0.00030"	"7/72"	"7"	"72"	"416061.676696777"	"HCD"	"MS2"	"44.53554"	"22.0"	"100.000"	"77.6459"	"26531"	"26531"	"26509"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.5"	""	"23.1"	""	"28.3"	""	"40.6"	""	"42.9"	"49.7"	""	"944"	"42"	"36.000"	"29.000"	"0.00295081510990124"	""	"0"	"0.0008201"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAQDQIK"	"[R].qAQDQIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.4419"	"0.0000"	"1"	"1"	"1"	"644.88477"	"1288.76225"	"1288.76252"	"-0.21"	"-0.00013"	"6/60"	"6"	"60"	"1562192.65148926"	"HCD"	"MS2"	"0"	"134.1"	"100.000"	"30.7900"	"7537"	"7537"	"7522"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"203.5"	""	"146.8"	""	"151.6"	""	"269.3"	""	"244.5"	"257.8"	""	"851"	"43"	"36.000"	"29.000"	"0.00218725573748322"	""	"0.001374"	"0.01692"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAQDQIK"	"[R].qAQDQIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.3243"	"0.0000"	"1"	"1"	"1"	"644.88550"	"1288.76372"	"1288.76252"	"0.93"	"0.00060"	"12/60"	"12"	"60"	"1319994.31433105"	"HCD"	"MS2"	"0"	"107.6"	"100.000"	"30.8133"	"7535"	"7535"	"7516"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"171.9"	""	"100.6"	""	"121.5"	""	"205.6"	""	"217.2"	"211.1"	""	"844"	"37"	"36.000"	"29.000"	"0.00769683986378887"	""	"0.001886"	"0.02141"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELEIQK"	"[K].aELEIQk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.5143"	"0.0000"	"1"	"1"	"1"	"644.89716"	"1288.78703"	"1288.78767"	"-0.50"	"-0.00032"	"12/54"	"12"	"54"	"1199298.52935791"	"HCD"	"MS2"	"0"	"93.1"	"100.000"	"60.4426"	"19561"	"19561"	"19551"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"149.9"	""	"114.1"	""	"125.5"	""	"158.8"	""	"175.5"	"164.0"	""	"626"	"35"	"34.000"	"27.000"	"0.00925857902030634"	""	"0.002056"	"0.02222"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELEIQK"	"[K].aELEIQk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"644.89734"	"1288.78740"	"1288.78767"	"-0.21"	"-0.00014"	"12/54"	"12"	"54"	"868029.085693359"	"HCD"	"MS2"	"3.755823"	"68.4"	"100.000"	"60.7414"	"19682"	"19682"	"19657"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.5"	""	"79.7"	""	"90.1"	""	"115.7"	"0.9"	"120.6"	"135.3"	""	"621"	"33"	"34.000"	"27.000"	"0.0151377596177102"	""	"0.001886"	"0.02162"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELEIQK"	"[K].aELEIQk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"644.89734"	"1288.78740"	"1288.78767"	"-0.21"	"-0.00014"	"12/54"	"12"	"54"	"1023957.18621826"	"HCD"	"MS2"	"0"	"82.1"	"100.000"	"60.6106"	"19614"	"19614"	"19605"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"128.4"	""	"116.3"	""	"111.6"	""	"133.4"	""	"140.2"	"152.5"	""	"621"	"35"	"34.000"	"27.000"	"0.00977375851528458"	""	"0.001374"	"0.01804"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELEIQK"	"[K].aELEIQk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.5676"	"0.0000"	"1"	"1"	"1"	"644.89807"	"1288.78887"	"1288.78767"	"0.93"	"0.00060"	"12/54"	"12"	"54"	"946393.02935791"	"HCD"	"MS2"	"5.502513"	"74.6"	"100.000"	"60.9157"	"19737"	"19737"	"19718"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"113.2"	""	"81.5"	""	"91.6"	""	"123.5"	""	"154.1"	"149.7"	""	"593"	"37"	"34.000"	"27.000"	"0.0060816958602178"	""	"0.001374"	"0.01683"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDEDYLYR"	"[R].sDEDYLYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"645.31396"	"1289.62065"	"1289.62111"	"-0.36"	"-0.00023"	"10/62"	"10"	"62"	"1219344.82507324"	"HCD"	"MS2"	"41.34638"	"73.9"	"100.000"	"49.3216"	"15049"	"15049"	"15030"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"84.6"	""	"76.1"	""	"84.7"	""	"131.9"	"0.1"	"158.3"	"167.1"	""	"341"	"17"	"32.000"	"25.000"	"0.333214877209705"	"14"	"0.00736"	"0.08736"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDEDYLYR"	"[R].sDEDYLYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"645.31415"	"1289.62102"	"1289.62111"	"-0.07"	"-0.00005"	"5/62"	"5"	"62"	"1291086.63763428"	"HCD"	"MS2"	"46.82141"	"75.1"	"100.000"	"48.9502"	"14910"	"14910"	"14895"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.4"	""	"74.8"	""	"87.1"	""	"144.3"	"1.8"	"162.2"	"168.3"	""	"341"	"16"	"32.000"	"25.000"	"0.429263916182885"	"15"	"0.0008629"	"0.01092"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVSDDMK"	"[K].hVSDDMk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"3"	"3"	"0.7805"	"0.0000"	"1"	"1"	"1"	"430.56866"	"1289.69144"	"1289.69239"	"-0.74"	"-0.00032"	"6/52"	"6"	"52"	"15373615.6692505"	"HCD"	"MS2"	"24.29161"	"604.9"	"84.925"	"27.6942"	"6266"	"6266"	"6248"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1095.9"	""	"816.5"	""	"799.2"	""	"594.8"	""	"1187.1"	"1246.0"	""	"849"	"41"	"36.000"	"29.000"	"0.00353897662871035"	"24"	"0"	"0.002516"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVSDDMK"	"[K].hVSDDMk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"3"	"3"	"0.6410"	"0.0000"	"1"	"1"	"1"	"430.56873"	"1289.69162"	"1289.69239"	"-0.60"	"-0.00026"	"6/52"	"6"	"52"	"14678792.0251465"	"HCD"	"MS2"	"39.63921"	"679.2"	"100.000"	"27.6269"	"6254"	"6254"	"6231"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1236.8"	""	"901.0"	""	"890.6"	""	"699.6"	""	"1340.9"	"1378.8"	""	"848"	"39"	"36.000"	"29.000"	"0.00560229348895108"	"29"	"0.0001301"	"0.004825"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNGASASEGR"	"[R].lVNGASASEGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O70513"	"Galectin-3-binding protein OS=Rattus norvegicus OX=10116 GN=Lgals3bp PE=1 SV=2"	"O70513"	"Galectin-3-binding protein OS=Rattus norvegicus OX=10116 GN=Lgals3bp PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"645.35577"	"1289.70427"	"1289.70109"	"2.46"	"0.00159"	"8/102"	"8"	"102"	"894917.116271973"	"HCD"	"MS2"	"0"	"65.2"	"100.000"	"32.0014"	"8019"	"8019"	"7993"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"100.0"	""	"83.8"	""	"85.9"	""	"109.8"	""	"107.2"	"135.8"	""	"993"	"41"	"36.000"	"29.000"	"0.00393476910583554"	"15"	"0"	"0.0004842"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNGASASEGR"	"[R].lVNGASASEGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O70513"	"Galectin-3-binding protein OS=Rattus norvegicus OX=10116 GN=Lgals3bp PE=1 SV=2"	"O70513"	"Galectin-3-binding protein OS=Rattus norvegicus OX=10116 GN=Lgals3bp PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"645.35614"	"1289.70500"	"1289.70109"	"3.03"	"0.00195"	"11/102"	"11"	"102"	"684840.635559082"	"HCD"	"MS2"	"100"	"51.8"	"100.000"	"32.0146"	"8032"	"8032"	"8013"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.8"	""	"64.4"	""	"58.3"	""	"102.7"	"0.8"	"90.1"	"99.3"	""	"978"	"5"	"36.000"	"29.000"	"16.0808447498356"	"13"	"0.005369"	"0.06115"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVLQESIR"	"[K].sEVLQESIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LSG8"	"Syndetin OS=Rattus norvegicus OX=10116 GN=Vps50 PE=1 SV=1"	"F1LSG8"	"Syndetin OS=Rattus norvegicus OX=10116 GN=Vps50 PE=1 SV=1"	"0"	"2"	"2"	"0.3871"	"0.0000"	"1"	"1"	"1"	"645.36493"	"1289.72258"	"1289.72625"	"-2.84"	"-0.00183"	"8/84"	"8"	"84"	"625817.229431152"	"HCD"	"MS2"	"0"	"45.9"	"100.000"	"51.7519"	"16052"	"16052"	"16021"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.1"	""	"53.7"	""	"58.2"	""	"76.6"	""	"84.7"	"93.5"	""	"966"	"31"	"36.000"	"29.000"	"0.0419707887345284"	""	"0.0001301"	"0.004363"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVLQESIR"	"[K].sEVLQESIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LSG8"	"Syndetin OS=Rattus norvegicus OX=10116 GN=Vps50 PE=1 SV=1"	"F1LSG8"	"Syndetin OS=Rattus norvegicus OX=10116 GN=Vps50 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"645.36621"	"1289.72515"	"1289.72625"	"-0.85"	"-0.00055"	"5/84"	"5"	"84"	"646596.669250488"	"HCD"	"MS2"	"0"	"50.2"	"100.000"	"52.0724"	"16171"	"16171"	"16147"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"72.9"	""	"56.7"	""	"72.8"	""	"87.7"	"2.1"	"88.2"	"94.7"	""	"979"	"28"	"36.000"	"29.000"	"0.0840916155513639"	"28"	"0.0008629"	"0.01013"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEIITVSDGR"	"[K].aEIITVSDGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C0A1"	"Vacuolar protein-sorting-associated protein 25 OS=Rattus norvegicus OX=10116 GN=Vps25 PE=1 SV=1"	"P0C0A1"	"Vacuolar protein-sorting-associated protein 25 OS=Rattus norvegicus OX=10116 GN=Vps25 PE=1 SV=1"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"645.36664"	"1289.72600"	"1289.72625"	"-0.19"	"-0.00012"	"9/84"	"9"	"84"	"1280237.60205078"	"HCD"	"MS2"	"42.69889"	"65.8"	"100.000"	"55.6195"	"17627"	"17627"	"17605"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.9"	""	"80.3"	""	"93.3"	""	"106.1"	"0.9"	"120.9"	"131.9"	""	"1014"	"43"	"37.000"	"30.000"	"0.00262426663798938"	"22"	"0"	"0.0002146"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEETITQAR"	"[K].iEETITQAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P54290"	"Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Rattus norvegicus OX=10116 GN=Cacna2d1 PE=1 SV=1"	"P54290"	"Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Rattus norvegicus OX=10116 GN=Cacna2d1 PE=1 SV=1"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"1"	"645.36682"	"1289.72637"	"1289.72625"	"0.09"	"0.00006"	"12/76"	"12"	"76"	"768091.226623535"	"HCD"	"MS2"	"45.82279"	"63.8"	"100.000"	"53.1393"	"16618"	"16618"	"16593"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"83.0"	""	"64.6"	""	"57.5"	""	"109.4"	"0.7"	"135.7"	"156.3"	""	"1014"	"8"	"37.000"	"30.000"	"7.4990795280128"	"20"	"0.003449"	"0.03254"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEIITVSDGR"	"[K].aEIITVSDGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C0A1"	"Vacuolar protein-sorting-associated protein 25 OS=Rattus norvegicus OX=10116 GN=Vps25 PE=1 SV=1"	"P0C0A1"	"Vacuolar protein-sorting-associated protein 25 OS=Rattus norvegicus OX=10116 GN=Vps25 PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"645.36688"	"1289.72649"	"1289.72625"	"0.19"	"0.00012"	"8/84"	"8"	"84"	"1372085.78570557"	"HCD"	"MS2"	"43.99282"	"74.5"	"100.000"	"55.8057"	"17689"	"17689"	"17666"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"101.2"	""	"83.7"	""	"100.6"	""	"128.9"	"1.2"	"134.6"	"155.9"	""	"1018"	"36"	"37.000"	"30.000"	"0.0124370615132123"	"22"	"0"	"0.0001106"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"QESVSELLR"	"[R].qESVSELLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q924C3"	"Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 OS=Rattus norvegicus OX=10116 GN=Enpp1 PE=1 SV=2"	"Q924C3"	"Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 OS=Rattus norvegicus OX=10116 GN=Enpp1 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"645.36945"	"1289.73161"	"1289.72625"	"4.16"	"0.00268"	"7/88"	"7"	"88"	"531682.710083008"	"HCD"	"MS2"	"43.63607"	"37.6"	"100.000"	"65.6073"	"21653"	"21653"	"21624"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.1"	""	"44.8"	""	"39.3"	""	"79.4"	""	"72.8"	"79.7"	""	"1001"	"12"	"36.000"	"30.000"	"3.10744951632147"	"24"	"0.004942"	"0.05361"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPEELEK"	"[K].sPEELEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"430.58264"	"1289.73337"	"1289.73530"	"-1.50"	"-0.00064"	"4/58"	"4"	"58"	"3178532.32006836"	"HCD"	"MS2"	"32.77262"	"152.8"	"100.000"	"45.8618"	"13652"	"13652"	"13627"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"221.1"	""	"185.0"	""	"193.2"	""	"252.2"	""	"285.8"	"315.8"	""	"1020"	"15"	"37.000"	"30.000"	"1.54017537740503"	"26"	"0.009021"	"0.116"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPEELEK"	"[K].sPEELEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"645.37036"	"1289.73345"	"1289.73530"	"-1.44"	"-0.00093"	"6/58"	"6"	"58"	"3174509.31835938"	"HCD"	"MS2"	"36.82048"	"225.8"	"100.000"	"45.7422"	"13591"	"13591"	"13566"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"385.2"	""	"270.5"	""	"298.4"	""	"362.3"	"10.0"	"380.0"	"430.8"	""	"1020"	"32"	"37.000"	"30.000"	"0.036105235003591"	""	"0.006769"	"0.07941"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPEELEK"	"[K].sPEELEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"430.58279"	"1289.73383"	"1289.73530"	"-1.14"	"-0.00049"	"7/58"	"7"	"58"	"2823361.94866943"	"HCD"	"MS2"	"24.96979"	"132.5"	"100.000"	"46.0506"	"13717"	"13717"	"13693"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"201.2"	""	"157.9"	""	"163.4"	""	"198.6"	""	"254.0"	"285.7"	""	"1020"	"15"	"37.000"	"30.000"	"1.80123416593898"	"26"	"0.008777"	"0.1142"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPEELEK"	"[K].sPEELEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.4516"	"0.0000"	"1"	"1"	"1"	"645.37073"	"1289.73418"	"1289.73530"	"-0.87"	"-0.00056"	"6/58"	"6"	"58"	"2474361.01159668"	"HCD"	"MS2"	"39.17228"	"172.1"	"100.000"	"45.5603"	"13529"	"13529"	"13507"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"295.2"	""	"210.0"	""	"228.8"	""	"283.8"	"3.8"	"289.0"	"318.2"	""	"1021"	"31"	"37.000"	"30.000"	"0.0389041334617973"	""	"0.007339"	"0.08392"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPEELEK"	"[K].sPEELEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"645.37073"	"1289.73418"	"1289.73530"	"-0.87"	"-0.00056"	"6/58"	"6"	"58"	"21004413.8179932"	"HCD"	"MS2"	"1.514058"	"706.9"	"52.096"	"45.8389"	"13643"	"13643"	"13627"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1168.4"	""	"822.0"	""	"880.6"	""	"1143.3"	""	"1228.3"	"1463.8"	""	"1021"	"32"	"37.000"	"30.000"	"0.0295798349525923"	""	"0.008641"	"0.1076"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPEELEK"	"[K].sPEELEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.4516"	"0.0000"	"1"	"1"	"1"	"645.37103"	"1289.73479"	"1289.73530"	"-0.40"	"-0.00026"	"6/58"	"6"	"58"	"18091825.2838135"	"HCD"	"MS2"	"1.494864"	"679.6"	"59.636"	"46.0323"	"13710"	"13710"	"13693"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1144.5"	""	"721.5"	""	"885.5"	""	"1104.9"	""	"1222.3"	"1365.4"	""	"990"	"31"	"36.000"	"29.000"	"0.0387797673169275"	""	"0.006739"	"0.07631"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPEELEK"	"[K].sPEELEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.3810"	"0.0000"	"1"	"1"	"3"	"645.37115"	"1289.73503"	"1289.73530"	"-0.21"	"-0.00014"	"9/58"	"9"	"58"	"2351170.54937744"	"HCD"	"MS2"	"10.18311"	"147.8"	"100.000"	"46.3545"	"13841"	"13841"	"13821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"215.0"	""	"166.7"	""	"198.6"	""	"241.6"	""	"278.1"	"303.0"	""	"981"	"21"	"36.000"	"29.000"	"0.414609273551122"	"27"	"0.008437"	"0.1001"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNQDEK"	"[R].vVNQDEk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"645.37543"	"1289.74358"	"1289.74654"	"-2.29"	"-0.00148"	"6/58"	"6"	"58"	"1368501.68609619"	"HCD"	"MS2"	"32.31375"	"103.9"	"100.000"	"32.8578"	"8368"	"8368"	"8347"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"109.8"	""	"84.0"	""	"92.4"	""	"231.1"	""	"224.3"	"249.8"	""	"960"	"24"	"36.000"	"29.000"	"0.194644097015224"	"25"	"0.005309"	"0.05998"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGSTPNGAK"	"[R].vGSTPnGAk.[D]"	"N-Term(TMT6plex); N6(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"645.37579"	"1289.74431"	"1289.74654"	"-1.73"	"-0.00111"	"9/72"	"9"	"72"	"701591.653747559"	"HCD"	"MS2"	"35.07662"	"51.4"	"100.000"	"33.6937"	"8713"	"8713"	"8692"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.6"	""	"55.7"	""	"64.2"	""	"86.5"	"0.3"	"108.0"	"101.8"	""	"971"	"24"	"36.000"	"29.000"	"0.203324275864749"	"21"	"0.006834"	"0.07974"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGPNSSK"	"[K].eLGPNSSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"645.37616"	"1289.74504"	"1289.74654"	"-1.16"	"-0.00075"	"7/74"	"7"	"74"	"2587984.26245117"	"HCD"	"MS2"	"0"	"197.0"	"100.000"	"35.6419"	"9500"	"9500"	"9481"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"328.6"	""	"255.3"	""	"285.9"	""	"303.6"	""	"351.0"	"342.3"	""	"970"	"33"	"36.000"	"29.000"	"0.0228950575012841"	"27"	"0.008668"	"0.1097"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNQDEK"	"[R].vVNQDEk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"645.37640"	"1289.74553"	"1289.74654"	"-0.78"	"-0.00050"	"6/58"	"6"	"58"	"2240475.81799316"	"HCD"	"MS2"	"13.88193"	"167.9"	"100.000"	"32.9035"	"8393"	"8393"	"8363"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"173.3"	""	"130.9"	""	"118.0"	""	"411.7"	""	"388.7"	"379.2"	""	"938"	"34"	"36.000"	"29.000"	"0.020519786731922"	"26"	"0.004069"	"0.04419"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGSTPNGAK"	"[R].vGSTPnGAk.[D]"	"N-Term(TMT6plex); N6(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"645.37689"	"1289.74651"	"1289.74654"	"-0.02"	"-0.00001"	"9/72"	"9"	"72"	"750184.157958984"	"HCD"	"MS2"	"45.01132"	"52.6"	"100.000"	"33.6823"	"8702"	"8702"	"8677"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"73.6"	""	"64.5"	""	"68.4"	""	"88.2"	"2.6"	"97.1"	"104.7"	""	"976"	"24"	"36.000"	"29.000"	"0.201103589319497"	"17"	"0.002973"	"0.02951"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGPNSSK"	"[K].eLGPNSSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"645.37714"	"1289.74700"	"1289.74654"	"0.36"	"0.00023"	"7/74"	"7"	"74"	"1227033.81262207"	"HCD"	"MS2"	"33.68005"	"99.3"	"100.000"	"35.6824"	"9513"	"9513"	"9487"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"154.1"	""	"141.9"	""	"144.5"	""	"152.5"	""	"181.5"	"171.8"	""	"957"	"25"	"36.000"	"29.000"	"0.15448344372395"	"21"	"0.008522"	"0.1062"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDEDIVK"	"[K].lDEDIVk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ERA7"	"Mesothelin OS=Rattus norvegicus OX=10116 GN=Msln PE=2 SV=2"	"Q9ERA7"	"Mesothelin OS=Rattus norvegicus OX=10116 GN=Msln PE=2 SV=2"	"0"	"2"	"2"	"0.0800"	"0.0000"	"1"	"1"	"1"	"645.38843"	"1289.76958"	"1289.77169"	"-1.64"	"-0.00106"	"6/52"	"6"	"52"	"410211.786682129"	"HCD"	"MS2"	"51.5857"	"35.8"	"100.000"	"70.3465"	"23570"	"23570"	"23541"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.7"	""	"35.3"	""	"37.2"	""	"65.2"	""	"83.2"	"74.4"	""	"839"	"25"	"36.000"	"29.000"	"0.13113902945085"	""	"0.002056"	"0.02249"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EALLEEK"	"[K].eALLEEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q3KR97"	"Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 OS=Rattus norvegicus OX=10116 GN=Baiap2l1 PE=1 SV=1"	"Q3KR97"	"Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 OS=Rattus norvegicus OX=10116 GN=Baiap2l1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"645.38849"	"1289.76970"	"1289.77169"	"-1.54"	"-0.00099"	"9/58"	"9"	"58"	"1005567.51635742"	"HCD"	"MS2"	"54.24103"	"55.4"	"100.000"	"61.3886"	"19946"	"19946"	"19921"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.6"	""	"59.0"	""	"79.5"	""	"83.3"	""	"107.2"	"126.0"	""	"839"	"13"	"36.000"	"29.000"	"2.35902185917351"	"24"	"0.008052"	"0.09966"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"EALLQEK"	"[].eALLqEk.[]"	"N-Term(TMT6plex); Q5(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"4"	"645.38849"	"1289.76970"	"1289.77169"	"-1.54"	"-0.00099"	"9/62"	"9"	"62"	"1005567.51635742"	"HCD"	"MS2"	"54.24103"	"55.4"	"100.000"	"61.3886"	"19946"	"19946"	"19921"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.6"	""	"59.0"	""	"79.5"	""	"83.3"	""	"107.2"	"126.0"	""	"839"	"13"	"36.000"	"29.000"	"2.35902185917351"	"24"	"0.008052"	"0.09967"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEEVEK"	"[K].vVEEVEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"645.38861"	"1289.76995"	"1289.77169"	"-1.35"	"-0.00087"	"6/54"	"6"	"54"	"842717.766052246"	"HCD"	"MS2"	"100"	"70.4"	"100.000"	"52.2356"	"16238"	"16238"	"16208"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.6"	""	"78.8"	""	"88.0"	""	"103.7"	""	"138.4"	"155.6"	""	"839"	"13"	"36.000"	"29.000"	"2.29473196434021"	"19"	"0.005309"	"0.05989"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNLLEK"	"[R].nVnLLEk.[L]"	"N-Term(TMT6plex); N1(Deamidated); N3(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q66HC7"	"Transcription factor SPT20 homolog OS=Rattus norvegicus OX=10116 GN=Supt20h PE=2 SV=1"	"Q66HC7"	"Transcription factor SPT20 homolog OS=Rattus norvegicus OX=10116 GN=Supt20h PE=2 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"3"	"645.38879"	"1289.77031"	"1289.77169"	"-1.07"	"-0.00069"	"6/60"	"6"	"60"	"1974509.65368652"	"HCD"	"MS2"	"2.164759"	"146.3"	"100.000"	"64.8081"	"21328"	"21328"	"21310"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"185.4"	""	"163.2"	""	"168.5"	""	"267.6"	""	"309.5"	"297.6"	""	"839"	"20"	"36.000"	"29.000"	"0.416612182312582"	"26"	"0.007413"	"0.08848"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDEDIVK"	"[K].lDEDIVk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ERA7"	"Mesothelin OS=Rattus norvegicus OX=10116 GN=Msln PE=2 SV=2"	"Q9ERA7"	"Mesothelin OS=Rattus norvegicus OX=10116 GN=Msln PE=2 SV=2"	"0"	"2"	"2"	"0.2353"	"0.0000"	"1"	"1"	"1"	"645.38885"	"1289.77043"	"1289.77169"	"-0.97"	"-0.00063"	"6/52"	"6"	"52"	"378895.53112793"	"HCD"	"MS2"	"45.67108"	"33.7"	"100.000"	"70.2343"	"23538"	"23538"	"23512"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.4"	""	"32.0"	""	"31.3"	""	"64.4"	""	"75.9"	"81.6"	""	"839"	"34"	"36.000"	"29.000"	"0.0182697231011096"	""	"0.001546"	"0.01952"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEILEK"	"[K].aEEILEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"0"	"2"	"2"	"0.1143"	"0.0000"	"1"	"1"	"1"	"645.38892"	"1289.77056"	"1289.77169"	"-0.88"	"-0.00057"	"12/56"	"12"	"56"	"1378520.70916748"	"HCD"	"MS2"	"18.25922"	"106.9"	"100.000"	"64.1647"	"21070"	"21070"	"21049"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"178.7"	""	"142.7"	""	"161.7"	""	"176.0"	""	"197.6"	"159.9"	""	"839"	"35"	"36.000"	"29.000"	"0.0128153940699391"	""	"0.0023"	"0.02291"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEEVEK"	"[K].vVEEVEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"645.38904"	"1289.77080"	"1289.77169"	"-0.69"	"-0.00044"	"6/54"	"6"	"54"	"802528.99597168"	"HCD"	"MS2"	"48.5544"	"63.9"	"100.000"	"51.9198"	"16120"	"16120"	"16099"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"98.5"	""	"71.7"	""	"95.7"	""	"99.2"	"1.6"	"109.3"	"129.2"	""	"804"	"33"	"36.000"	"29.000"	"0.0213415546580857"	"27"	"0.001374"	"0.01698"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEILEK"	"[K].aEEILEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"645.38916"	"1289.77104"	"1289.77169"	"-0.50"	"-0.00032"	"12/56"	"12"	"56"	"1229790.14526367"	"HCD"	"MS2"	"36.33372"	"97.8"	"100.000"	"64.2491"	"21090"	"21090"	"21070"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"157.4"	""	"125.6"	""	"140.3"	""	"171.8"	""	"179.2"	"152.4"	""	"804"	"35"	"36.000"	"29.000"	"0.0122243578032186"	""	"0.001886"	"0.02106"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEILEK"	"[K].aEEILEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"0"	"2"	"2"	"0.1143"	"0.0000"	"1"	"1"	"1"	"645.38922"	"1289.77117"	"1289.77169"	"-0.41"	"-0.00026"	"12/56"	"12"	"56"	"5383264.23266602"	"HCD"	"MS2"	"0"	"372.6"	"100.000"	"64.5372"	"21208"	"21208"	"21191"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"574.3"	""	"485.0"	""	"511.1"	""	"601.0"	"2.5"	"727.8"	"628.4"	""	"804"	"35"	"36.000"	"29.000"	"0.0125090996751662"	""	"0.004069"	"0.04471"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNLLEK"	"[R].nVnLLEk.[L]"	"N-Term(TMT6plex); N1(Deamidated); N3(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q66HC7"	"Transcription factor SPT20 homolog OS=Rattus norvegicus OX=10116 GN=Supt20h PE=2 SV=1"	"Q66HC7"	"Transcription factor SPT20 homolog OS=Rattus norvegicus OX=10116 GN=Supt20h PE=2 SV=1"	"0"	"2"	"2"	"0.3182"	"0.0000"	"1"	"1"	"3"	"645.38928"	"1289.77129"	"1289.77169"	"-0.31"	"-0.00020"	"6/60"	"6"	"60"	"2848280.98724365"	"HCD"	"MS2"	"0.8006566"	"217.8"	"100.000"	"64.8237"	"21320"	"21320"	"21303"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"274.9"	""	"260.1"	""	"261.7"	""	"374.4"	""	"449.4"	"449.7"	""	"804"	"22"	"36.000"	"29.000"	"0.239456181698662"	"28"	"0.007018"	"0.0813"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEILEK"	"[K].aEEILEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"0"	"2"	"2"	"0.1515"	"0.0000"	"1"	"1"	"1"	"645.38928"	"1289.77129"	"1289.77169"	"-0.31"	"-0.00020"	"12/56"	"12"	"56"	"5474547.77783203"	"HCD"	"MS2"	"1.631688"	"395.7"	"100.000"	"64.4829"	"21200"	"21200"	"21183"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"589.0"	""	"489.4"	""	"540.2"	""	"660.8"	""	"789.8"	"684.6"	""	"804"	"33"	"36.000"	"29.000"	"0.0185449664973273"	""	"0.00447"	"0.04813"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPPPSYGGSSR"	"[R].gPPPSYGGSSR.[Y]"	"N-Term(TMT6plex)"	"1"	"3"	"Q4V898"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1"	"Q4V898; P84586; D4AE41"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1; RNA-binding motif protein, X chromosome retrogene-like OS=Rattus norvegicus OX=10116 GN=Rbmxrtl PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Rattus norvegicus OX=10116 GN=Rbmxl1 PE=3 SV=1"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"645.83429"	"1290.66130"	"1290.66398"	"-2.07"	"-0.00134"	"16/90"	"16"	"90"	"944416.691223145"	"HCD"	"MS2"	"0"	"55.2"	"100.000"	"26.9708"	"5989"	"5989"	"5967"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.8"	""	"67.5"	""	"56.4"	""	"119.5"	""	"112.8"	"101.8"	""	"692"	"33"	"35.000"	"28.000"	"0.0190141142354738"	"16"	"0"	"0.003218"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPPPSYGGSSR"	"[R].gPPPSYGGSSR.[Y]"	"N-Term(TMT6plex)"	"1"	"3"	"Q4V898"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1"	"Q4V898; P84586; D4AE41"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1; RNA-binding motif protein, X chromosome retrogene-like OS=Rattus norvegicus OX=10116 GN=Rbmxrtl PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Rattus norvegicus OX=10116 GN=Rbmxl1 PE=3 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"645.83496"	"1290.66265"	"1290.66398"	"-1.03"	"-0.00067"	"9/90"	"9"	"90"	"940529.34161377"	"HCD"	"MS2"	"0"	"53.9"	"100.000"	"27.0058"	"5987"	"5987"	"5968"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"82.8"	""	"68.7"	""	"44.2"	""	"105.1"	""	"108.1"	"103.3"	""	"685"	"38"	"35.000"	"28.000"	"0.00603476795895983"	"21"	"0"	"0.001985"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPPPSYGGSSR"	"[R].gPPPSYGGSSR.[Y]"	"N-Term(TMT6plex)"	"1"	"3"	"Q4V898"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1"	"Q4V898; P84586; D4AE41"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1; RNA-binding motif protein, X chromosome retrogene-like OS=Rattus norvegicus OX=10116 GN=Rbmxrtl PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Rattus norvegicus OX=10116 GN=Rbmxl1 PE=3 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"645.83508"	"1290.66289"	"1290.66398"	"-0.85"	"-0.00055"	"13/90"	"13"	"90"	"691682.223937988"	"HCD"	"MS2"	"0"	"47.2"	"100.000"	"26.7098"	"5867"	"5867"	"5840"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.4"	""	"65.8"	""	"47.4"	""	"97.4"	""	"94.5"	"88.5"	""	"685"	"16"	"35.000"	"28.000"	"0.943323330893321"	"16"	"0.006505"	"0.07365"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPPPSYGGSSR"	"[R].gPPPSYGGSSR.[Y]"	"N-Term(TMT6plex)"	"1"	"3"	"Q4V898"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1"	"Q4V898; P84586; D4AE41"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1; RNA-binding motif protein, X chromosome retrogene-like OS=Rattus norvegicus OX=10116 GN=Rbmxrtl PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Rattus norvegicus OX=10116 GN=Rbmxl1 PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"645.83514"	"1290.66301"	"1290.66398"	"-0.75"	"-0.00048"	"10/90"	"10"	"90"	"360172.497741699"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"27.2596"	"6105"	"6105"	"6086"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.3"	""	"26.5"	""	"22.6"	""	"48.1"	""	"37.7"	"50.5"	""	"681"	"17"	"35.000"	"28.000"	"0.671609941647108"	"14"	"0.003967"	"0.04145"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPPPSYGGSSR"	"[R].gPPPSYGGSSR.[Y]"	"N-Term(TMT6plex)"	"1"	"3"	"Q4V898"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1"	"Q4V898; P84586; D4AE41"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1; RNA-binding motif protein, X chromosome retrogene-like OS=Rattus norvegicus OX=10116 GN=Rbmxrtl PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Rattus norvegicus OX=10116 GN=Rbmxl1 PE=3 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"645.83569"	"1290.66411"	"1290.66398"	"0.10"	"0.00006"	"13/90"	"13"	"90"	"370302.437988281"	"HCD"	"MS2"	"0"	"23.4"	"100.000"	"27.3176"	"6114"	"6114"	"6089"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.4"	""	"22.8"	""	"22.7"	""	"47.9"	""	"50.3"	"48.1"	""	"695"	"20"	"35.000"	"28.000"	"0.37753290420693"	"18"	"0.007413"	"0.08873"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPPPSYGGSSR"	"[R].gPPPSYGGSSR.[Y]"	"N-Term(TMT6plex)"	"1"	"3"	"Q4V898"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1"	"Q4V898; P84586; D4AE41"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1; RNA-binding motif protein, X chromosome retrogene-like OS=Rattus norvegicus OX=10116 GN=Rbmxrtl PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Rattus norvegicus OX=10116 GN=Rbmxl1 PE=3 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"645.83588"	"1290.66448"	"1290.66398"	"0.38"	"0.00025"	"14/90"	"14"	"90"	"942272.075805664"	"HCD"	"MS2"	"0"	"51.8"	"100.000"	"26.6656"	"5865"	"5865"	"5838"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.0"	""	"53.9"	""	"45.9"	""	"122.7"	""	"111.1"	"92.8"	""	"700"	"33"	"35.000"	"28.000"	"0.0171028325769992"	"20"	"0"	"0.002308"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGTIPPEYR"	"[K].eGTIPPEYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"645.84778"	"1290.68828"	"1290.68913"	"-0.66"	"-0.00043"	"6/76"	"6"	"76"	"690795.860900879"	"HCD"	"MS2"	"41.06359"	"48.2"	"100.000"	"45.5189"	"13501"	"13501"	"13478"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.6"	""	"63.1"	""	"59.5"	""	"81.6"	"1.2"	"94.0"	"100.3"	""	"867"	"11"	"36.000"	"29.000"	"3.53988457983949"	"16"	"0.00736"	"0.08478"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGTIPPEYR"	"[K].eGTIPPEYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"645.84790"	"1290.68852"	"1290.68913"	"-0.47"	"-0.00030"	"4/76"	"4"	"76"	"675309.716918945"	"HCD"	"MS2"	"27.26047"	"48.5"	"100.000"	"45.1899"	"13378"	"13378"	"13351"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.1"	""	"59.8"	""	"59.0"	""	"85.3"	""	"91.8"	"101.5"	""	"853"	"19"	"36.000"	"29.000"	"0.559653256931691"	"22"	"0.005067"	"0.05749"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYGDGNAVPR"	"[K].iYGDGNAVPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O35826"	"Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase OS=Rattus norvegicus OX=10116 GN=Gne PE=1 SV=1"	"O35826"	"Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase OS=Rattus norvegicus OX=10116 GN=Gne PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"645.85059"	"1290.69390"	"1290.70037"	"-5.01"	"-0.00324"	"8/80"	"8"	"80"	"956485.122253418"	"HCD"	"MS2"	"18.41976"	"64.1"	"100.000"	"47.2081"	"14188"	"14188"	"14161"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"95.1"	""	"80.6"	""	"83.7"	""	"92.1"	"2.2"	"124.7"	"129.6"	""	"858"	"30"	"36.000"	"29.000"	"0.0400366095041909"	"19"	"0"	"0.001499"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPAQDLTFR"	"[R].gGPAQDLTFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"645.85327"	"1290.69927"	"1290.70037"	"-0.85"	"-0.00055"	"9/86"	"9"	"86"	"1358729.49108887"	"HCD"	"MS2"	"27.64112"	"82.6"	"100.000"	"56.0315"	"17781"	"17781"	"17757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"108.3"	""	"112.3"	""	"104.8"	""	"125.9"	""	"169.1"	"169.6"	""	"883"	"38"	"36.000"	"29.000"	"0.00736089644341293"	"23"	"0"	"7.27E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPAQDLTFR"	"[R].gGPAQDLTFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"645.85376"	"1290.70024"	"1290.70037"	"-0.10"	"-0.00006"	"7/86"	"7"	"86"	"1362372.19445801"	"HCD"	"MS2"	"0"	"95.2"	"100.000"	"56.3312"	"17903"	"17903"	"17883"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"118.8"	""	"113.5"	""	"126.3"	""	"151.9"	""	"205.8"	"189.6"	""	"829"	"38"	"36.000"	"29.000"	"0.00614503746292998"	"20"	"0"	"0.0001378"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPAQDLTFR"	"[R].gGPAQDLTFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"645.85388"	"1290.70049"	"1290.70037"	"0.09"	"0.00006"	"9/86"	"9"	"86"	"1534335.05737305"	"HCD"	"MS2"	"10.68427"	"86.9"	"100.000"	"55.8800"	"17733"	"17733"	"17713"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"106.2"	""	"115.1"	""	"106.3"	""	"150.3"	""	"169.7"	"178.9"	""	"832"	"39"	"36.000"	"29.000"	"0.00507099673152744"	"19"	"0"	"0.0001454"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPAQDLTFR"	"[R].gGPAQDLTFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"645.85388"	"1290.70049"	"1290.70037"	"0.09"	"0.00006"	"7/86"	"7"	"86"	"1219922.09747314"	"HCD"	"MS2"	"6.51407"	"94.9"	"100.000"	"56.1883"	"17859"	"17859"	"17837"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"129.5"	""	"122.6"	""	"117.0"	""	"156.5"	""	"196.6"	"184.5"	""	"832"	"36"	"36.000"	"29.000"	"0.0100021492480288"	"17"	"0.0002479"	"0.005268"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVPIYESPR"	"[R].tVPIYESPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"645.86597"	"1290.72466"	"1290.72552"	"-0.67"	"-0.00043"	"6/76"	"6"	"76"	"2421627.94543457"	"HCD"	"MS2"	"0"	"120.2"	"100.000"	"54.8470"	"17299"	"17299"	"17280"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"158.7"	""	"149.4"	""	"146.4"	""	"204.8"	""	"237.4"	"244.4"	""	"885"	"28"	"36.000"	"29.000"	"0.0763683267205665"	"19"	"0"	"0.001766"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDLENVK"	"[K].dDLENVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.4324"	"0.0000"	"1"	"1"	"1"	"645.86859"	"1290.72991"	"1290.73055"	"-0.50"	"-0.00032"	"12/58"	"12"	"58"	"3256258.33032227"	"HCD"	"MS2"	"7.991161"	"267.7"	"100.000"	"49.9522"	"15319"	"15319"	"15302"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"258.2"	""	"174.0"	""	"207.1"	""	"504.5"	""	"738.4"	"677.4"	""	"873"	"37"	"36.000"	"29.000"	"0.00831733603390957"	""	"0.003449"	"0.03507"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDLENVK"	"[K].dDLENVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"645.86865"	"1290.73003"	"1290.73055"	"-0.41"	"-0.00026"	"12/58"	"12"	"58"	"3840747.35943604"	"HCD"	"MS2"	"3.301483"	"311.1"	"100.000"	"50.3536"	"15471"	"15471"	"15454"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"286.7"	""	"227.5"	""	"236.2"	""	"589.3"	""	"837.5"	"798.3"	""	"873"	"35"	"36.000"	"29.000"	"0.0129117244164975"	""	"0.003922"	"0.04003"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITGIEDK"	"[R].gITGIEDk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"645.88666"	"1290.76604"	"1290.76694"	"-0.70"	"-0.00045"	"7/64"	"7"	"64"	"1415488.5369873"	"HCD"	"MS2"	"0"	"110.7"	"100.000"	"57.0567"	"18213"	"18213"	"18195"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"134.2"	""	"127.0"	""	"134.4"	""	"179.0"	""	"239.3"	"238.7"	""	"771"	"34"	"35.000"	"28.000"	"0.0142897418247183"	"21"	"0.0001301"	"0.004792"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEENIK"	"[K].iSEENIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"645.88672"	"1290.76616"	"1290.76694"	"-0.60"	"-0.00039"	"12/56"	"12"	"56"	"2866777.09204102"	"HCD"	"MS2"	"0"	"225.8"	"100.000"	"50.7827"	"15656"	"15656"	"15636"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"317.5"	""	"265.6"	""	"263.3"	""	"362.1"	""	"452.1"	"484.7"	""	"771"	"36"	"35.000"	"28.000"	"0.00909964358891112"	"26"	"0.003967"	"0.04224"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIEQSIK"	"[K].dIEQSIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.0952"	"0.0000"	"1"	"1"	"1"	"430.92700"	"1290.76645"	"1290.76694"	"-0.38"	"-0.00016"	"4/62"	"4"	"62"	"3337502.6473999"	"HCD"	"MS2"	"19.16552"	"148.2"	"100.000"	"54.0190"	"16966"	"16966"	"16944"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"207.7"	""	"178.3"	""	"208.5"	""	"258.4"	""	"267.2"	"285.6"	""	"771"	"21"	"35.000"	"28.000"	"0.287755996367081"	""	"0.009417"	"0.1231"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQEVLDK"	"[K].tQEVLDk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"645.88690"	"1290.76653"	"1290.76694"	"-0.32"	"-0.00021"	"10/68"	"10"	"68"	"2103980.75701904"	"HCD"	"MS2"	"13.99761"	"157.5"	"100.000"	"47.5586"	"14343"	"14343"	"14317"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"191.9"	""	"182.0"	""	"191.0"	""	"296.1"	""	"320.2"	"317.5"	""	"771"	"26"	"35.000"	"28.000"	"0.104960135426404"	""	"0.004942"	"0.0552"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVEELNK"	"[K].tVEELNk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"0"	"2"	"2"	"0.2083"	"0.0000"	"1"	"1"	"1"	"645.88696"	"1290.76665"	"1290.76694"	"-0.22"	"-0.00014"	"10/56"	"10"	"56"	"2087752.66375732"	"HCD"	"MS2"	"13.79324"	"164.8"	"100.000"	"47.8892"	"14466"	"14466"	"14442"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"199.1"	""	"174.3"	""	"200.1"	""	"273.8"	""	"367.8"	"353.4"	""	"765"	"24"	"35.000"	"28.000"	"0.161298912561433"	""	"0.006505"	"0.07376"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITGIEDK"	"[R].gITGIEDk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"645.88708"	"1290.76689"	"1290.76694"	"-0.03"	"-0.00002"	"7/64"	"7"	"64"	"1250381.67694092"	"HCD"	"MS2"	"6.806205"	"101.2"	"100.000"	"57.2683"	"18285"	"18285"	"18267"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"115.3"	""	"104.7"	""	"121.5"	""	"170.6"	""	"234.8"	"218.5"	""	"765"	"35"	"35.000"	"28.000"	"0.0130206132560633"	"23"	"0"	"0.003521"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEENIK"	"[K].iSEENIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"645.88715"	"1290.76702"	"1290.76694"	"0.06"	"0.00004"	"12/56"	"12"	"56"	"2885145.80010986"	"HCD"	"MS2"	"0"	"222.2"	"100.000"	"51.0871"	"15769"	"15769"	"15746"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"334.8"	""	"238.7"	""	"255.7"	""	"380.9"	""	"447.5"	"452.2"	""	"765"	"35"	"35.000"	"28.000"	"0.0134471868502074"	"25"	"0.003653"	"0.03788"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDVEAIAK"	"[R].sDVEAIAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYA6"	"Cytochrome b-245 chaperone 1 OS=Rattus norvegicus OX=10116 GN=Cybc1 PE=1 SV=1"	"Q6AYA6"	"Cytochrome b-245 chaperone 1 OS=Rattus norvegicus OX=10116 GN=Cybc1 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"645.88824"	"1290.76921"	"1290.76694"	"1.76"	"0.00114"	"6/62"	"6"	"62"	"693575.595947266"	"HCD"	"MS2"	"11.73694"	"59.0"	"100.000"	"52.1405"	"16210"	"16210"	"16188"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"76.3"	""	"64.1"	""	"70.5"	""	"92.5"	"0.4"	"120.0"	"137.2"	""	"713"	"33"	"35.000"	"28.000"	"0.0191451835405995"	"23"	"0.0003538"	"0.006134"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMDLYSYR"	"[K].dMDLYSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.31250"	"1291.61772"	"1291.61900"	"-0.99"	"-0.00064"	"6/66"	"6"	"66"	"1673577.3069458"	"HCD"	"MS2"	"4.526267"	"88.2"	"100.000"	"67.8875"	"22581"	"22581"	"22562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"165.0"	""	"120.0"	""	"135.5"	""	"94.9"	"1.1"	"142.6"	"174.8"	""	"356"	"33"	"32.000"	"25.000"	"0.00896231083642472"	"15"	"0.0002479"	"0.005134"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMDLYSYR"	"[K].dMDLYSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.31268"	"1291.61809"	"1291.61900"	"-0.71"	"-0.00046"	"6/66"	"6"	"66"	"1761928.11425781"	"HCD"	"MS2"	"4.39578"	"92.6"	"100.000"	"68.0136"	"22618"	"22618"	"22599"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"164.1"	""	"142.3"	""	"144.8"	""	"97.1"	""	"164.2"	"165.0"	""	"354"	"26"	"32.000"	"25.000"	"0.0426553260877527"	"14"	"0.0001301"	"0.0047"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMYSYDIR"	"[K].dMYSYDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64380"	"Sarcosine dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sardh PE=1 SV=2"	"Q64380"	"Sarcosine dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sardh PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.31293"	"1291.61858"	"1291.61900"	"-0.33"	"-0.00021"	"6/66"	"6"	"66"	"671593.530273438"	"HCD"	"MS2"	"8.589138"	"38.7"	"100.000"	"61.1559"	"19851"	"19851"	"19826"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.4"	""	"54.9"	""	"57.7"	""	"57.5"	""	"69.7"	"72.3"	""	"364"	"41"	"32.000"	"25.000"	"0.00143242333724508"	"15"	"0.0004639"	"0.007862"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMYSYDIR"	"[K].dMYSYDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64380"	"Sarcosine dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sardh PE=1 SV=2"	"Q64380"	"Sarcosine dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sardh PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.31299"	"1291.61870"	"1291.61900"	"-0.24"	"-0.00015"	"5/66"	"5"	"66"	"643245.269836426"	"HCD"	"MS2"	"33.89915"	"39.1"	"100.000"	"61.3096"	"19898"	"19898"	"19873"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.1"	""	"60.2"	""	"61.7"	""	"55.8"	""	"72.5"	"70.1"	""	"364"	"29"	"32.000"	"25.000"	"0.0247782932208803"	"14"	"0.002056"	"0.02269"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMDLYSYR"	"[K].dMDLYSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"646.31311"	"1291.61894"	"1291.61900"	"-0.05"	"-0.00003"	"5/66"	"5"	"66"	"1975374.96398926"	"HCD"	"MS2"	"11.70444"	"105.5"	"100.000"	"67.5902"	"22461"	"22461"	"22440"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"186.6"	""	"161.4"	""	"152.2"	""	"122.5"	""	"179.0"	"197.9"	""	"364"	"20"	"32.000"	"25.000"	"0.199100058661521"	"16"	"0.000936"	"0.01306"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMDLYSYR"	"[K].dMDLYSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"646.31342"	"1291.61955"	"1291.61900"	"0.43"	"0.00028"	"5/66"	"5"	"66"	"2041256.3961792"	"HCD"	"MS2"	"17.00479"	"110.2"	"100.000"	"67.7255"	"22501"	"22501"	"22478"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"203.9"	""	"178.8"	""	"154.2"	""	"122.3"	""	"178.9"	"211.4"	""	"369"	"21"	"32.000"	"25.000"	"0.141578194787256"	"15"	"0.0008629"	"0.01101"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYGQSTYSR"	"[K].tYGQSTYSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"646.32635"	"1291.64543"	"1291.64800"	"-1.98"	"-0.00128"	"6/88"	"6"	"88"	"1927491.41607666"	"HCD"	"MS2"	"12.28244"	"117.6"	"100.000"	"27.9074"	"6354"	"6354"	"6326"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"207.2"	""	"165.9"	""	"175.8"	""	"166.5"	""	"194.0"	"205.0"	""	"598"	"42"	"34.000"	"27.000"	"0.00188222348674302"	"16"	"0"	"0.0008199"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYGQSTYSR"	"[K].tYGQSTYSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"646.32715"	"1291.64702"	"1291.64800"	"-0.76"	"-0.00049"	"5/88"	"5"	"88"	"522803.846313477"	"HCD"	"MS2"	"0"	"47.6"	"100.000"	"28.2378"	"6488"	"6488"	"6464"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.9"	""	"58.1"	""	"53.8"	""	"71.9"	"3.6"	"102.7"	"98.6"	""	"590"	"14"	"34.000"	"27.000"	"1.30864549959773"	"16"	"0.00447"	"0.04743"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYGQSTYSR"	"[K].tYGQSTYSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"646.32733"	"1291.64739"	"1291.64800"	"-0.47"	"-0.00030"	"6/88"	"6"	"88"	"2639602.38311768"	"HCD"	"MS2"	"4.266699"	"142.7"	"100.000"	"27.8750"	"6355"	"6355"	"6337"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"245.3"	""	"199.0"	""	"198.7"	""	"209.1"	"0.1"	"246.6"	"251.8"	""	"594"	"42"	"34.000"	"27.000"	"0.0018103245848033"	"19"	"0"	"0.0009836"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYGQSTYSR"	"[K].tYGQSTYSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"646.32751"	"1291.64775"	"1291.64800"	"-0.19"	"-0.00012"	"7/88"	"7"	"88"	"639435.707336426"	"HCD"	"MS2"	"0"	"57.8"	"100.000"	"28.1801"	"6479"	"6479"	"6454"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.5"	""	"62.5"	""	"76.2"	""	"92.1"	"2.8"	"130.6"	"109.5"	""	"594"	"12"	"34.000"	"27.000"	"1.88693286759968"	"19"	"0.005309"	"0.06037"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"MESIFHEK"	"[].mESIFHEk.[]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"646.33051"	"1291.65373"	"1291.65539"	"-1.28"	"-0.00083"	"4/66"	"4"	"66"	"179454.036621094"	"HCD"	"MS2"	"21.05323"	"11.4"	"100.000"	"82.2756"	"28396"	"28396"	"28376"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.1"	""	"15.1"	""	"13.0"	""	"13.1"	""	"18.2"	"31.9"	""	"634"	"19"	"35.000"	"28.000"	"0.393603781506795"	"24"	"0.006769"	"0.077"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGVADVDMSR"	"[R].iGVADVDMSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT8"	"SPRY domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Spryd4 PE=2 SV=1"	"Q4FZT8"	"SPRY domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Spryd4 PE=2 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"646.34784"	"1291.68840"	"1291.68775"	"0.50"	"0.00032"	"7/80"	"7"	"80"	"362390.612670898"	"HCD"	"MS2"	"19.88182"	"29.9"	"100.000"	"65.2977"	"21511"	"21511"	"21486"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.7"	""	"33.6"	""	"41.8"	""	"46.9"	"1.1"	"66.2"	"57.9"	""	"851"	"22"	"36.000"	"29.000"	"0.293021552094489"	"22"	"0.0007829"	"0.009373"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAEELEK"	"[R].dAEELEk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.1538"	"0.0000"	"1"	"1"	"1"	"646.36096"	"1291.71465"	"1291.71457"	"0.06"	"0.00004"	"12/58"	"12"	"58"	"4507928.89202881"	"HCD"	"MS2"	"3.806162"	"338.4"	"100.000"	"44.5762"	"13129"	"13129"	"13112"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"466.8"	""	"295.3"	""	"293.7"	""	"542.5"	""	"721.2"	"906.3"	""	"925"	"39"	"36.000"	"29.000"	"0.00595815417658074"	""	"0.003922"	"0.03975"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAEELEK"	"[R].dAEELEk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.1538"	"0.0000"	"1"	"1"	"1"	"646.36121"	"1291.71514"	"1291.71457"	"0.44"	"0.00028"	"12/58"	"12"	"58"	"3787319.77575684"	"HCD"	"MS2"	"4.738183"	"316.6"	"100.000"	"44.7111"	"13171"	"13171"	"13153"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"441.2"	""	"269.1"	""	"275.8"	""	"508.0"	""	"688.4"	"832.5"	""	"910"	"39"	"36.000"	"29.000"	"0.00592940884195796"	""	"0.00379"	"0.03891"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDGFVLNR"	"[K].eIDGFVLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"646.36346"	"1291.71965"	"1291.72077"	"-0.86"	"-0.00056"	"6/70"	"6"	"70"	"284673.721862793"	"HCD"	"MS2"	"12.46453"	"19.8"	"100.000"	"82.0961"	"28328"	"28328"	"28311"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.5"	""	"29.6"	""	"22.4"	""	"28.8"	""	"30.1"	"51.5"	""	"931"	"33"	"36.000"	"29.000"	"0.0226422554249375"	"26"	"0.0003538"	"0.006949"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDGFVLNR"	"[K].eIDGFVLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"646.36365"	"1291.72002"	"1291.72077"	"-0.58"	"-0.00037"	"7/70"	"7"	"70"	"350961.367248535"	"HCD"	"MS2"	"3.405599"	"22.2"	"100.000"	"82.0077"	"28289"	"28289"	"28271"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.6"	""	"32.9"	""	"25.8"	""	"26.1"	""	"31.6"	"53.1"	""	"924"	"47"	"36.000"	"29.000"	"0.00102716916948095"	"28"	"0"	"0.002554"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDGFVLNR"	"[K].eIDGFVLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"646.36414"	"1291.72099"	"1291.72077"	"0.18"	"0.00011"	"7/70"	"7"	"70"	"361441.762939453"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"81.7964"	"28207"	"28207"	"28190"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.1"	""	"31.1"	""	"27.1"	""	"35.8"	""	"29.7"	"52.3"	""	"888"	"43"	"36.000"	"29.000"	"0.00209595990321034"	"24"	"0"	"0.002176"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAANASASK"	"[K].nAANASASk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"0"	"2"	"2"	"0.2143"	"0.0000"	"1"	"1"	"1"	"646.37256"	"1291.73784"	"1291.73703"	"0.62"	"0.00040"	"11/84"	"11"	"84"	"315229.546203613"	"HCD"	"MS2"	"0"	"26.3"	"100.000"	"22.9865"	"4366"	"4366"	"4339"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.8"	""	"26.1"	""	"37.6"	""	"53.4"	""	"56.1"	"49.1"	""	"962"	"14"	"36.000"	"29.000"	"2.00976406357025"	"25"	"0.001812"	"0.02027"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISEQTGK"	"[K].aISEQTGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"646.38446"	"1291.76164"	"1291.76219"	"-0.42"	"-0.00027"	"7/68"	"7"	"68"	"2464033.31585693"	"HCD"	"MS2"	"3.820213"	"183.1"	"100.000"	"34.6675"	"9105"	"9105"	"9085"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"284.2"	""	"210.9"	""	"251.0"	""	"281.0"	""	"329.1"	"381.5"	""	"812"	"44"	"36.000"	"29.000"	"0.00154712724297872"	"25"	"0"	"0.00276"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISEQTGK"	"[K].aISEQTGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"646.38483"	"1291.76238"	"1291.76219"	"0.15"	"0.00009"	"7/68"	"7"	"68"	"2151176.68597412"	"HCD"	"MS2"	"5.189219"	"169.8"	"100.000"	"34.7678"	"9140"	"9140"	"9119"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"277.6"	""	"191.5"	""	"206.8"	""	"278.0"	""	"316.7"	"341.8"	""	"798"	"44"	"36.000"	"29.000"	"0.00159945820333294"	"24"	"0"	"0.002431"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FESPEVAER"	"[K].fESPEVAER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"646.83704"	"1292.66680"	"1292.66840"	"-1.24"	"-0.00080"	"5/76"	"5"	"76"	"1091275.80731201"	"HCD"	"MS2"	"0"	"71.5"	"100.000"	"48.8787"	"14881"	"14881"	"14863"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"83.5"	""	"84.9"	""	"84.5"	""	"123.0"	""	"150.3"	"153.7"	""	"694"	"26"	"35.000"	"28.000"	"0.0817202101511915"	"25"	"0.002711"	"0.02611"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FESPEVAER"	"[K].fESPEVAER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"646.83722"	"1292.66716"	"1292.66840"	"-0.96"	"-0.00062"	"5/76"	"5"	"76"	"1645074.89318848"	"HCD"	"MS2"	"7.776523"	"68.7"	"100.000"	"48.5357"	"14741"	"14741"	"14719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.3"	""	"72.8"	""	"79.8"	""	"132.0"	""	"144.6"	"139.6"	""	"694"	"33"	"35.000"	"28.000"	"0.0194683647683267"	"27"	"0.002711"	"0.0259"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FESPEVAER"	"[K].fESPEVAER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"646.83746"	"1292.66765"	"1292.66840"	"-0.58"	"-0.00037"	"5/76"	"5"	"76"	"1271881.26513672"	"HCD"	"MS2"	"0"	"78.0"	"100.000"	"49.2114"	"15004"	"15004"	"14982"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"108.3"	""	"82.1"	""	"87.0"	""	"142.3"	""	"159.7"	"161.9"	""	"690"	"27"	"35.000"	"28.000"	"0.0704399590910987"	"25"	"0.006505"	"0.07363"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FESPEVAER"	"[K].fESPEVAER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"646.83759"	"1292.66789"	"1292.66840"	"-0.39"	"-0.00025"	"5/76"	"5"	"76"	"1639567.80755615"	"HCD"	"MS2"	"3.308007"	"94.7"	"100.000"	"48.9075"	"14880"	"14880"	"14856"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"112.8"	""	"117.8"	""	"104.5"	""	"185.5"	""	"199.0"	"180.1"	""	"687"	"33"	"35.000"	"28.000"	"0.0192719979767154"	"22"	"0.004942"	"0.05535"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNTFSPEGR"	"[R].gVNTFSPEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"646.84296"	"1292.67864"	"1292.67963"	"-0.77"	"-0.00050"	"7/94"	"7"	"94"	"3752919.45391846"	"HCD"	"MS2"	"9.293825"	"196.1"	"100.000"	"42.7925"	"12407"	"12407"	"12389"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"248.4"	""	"216.3"	""	"256.7"	""	"332.2"	""	"421.7"	"387.3"	""	"720"	"27"	"35.000"	"28.000"	"0.0778578668541727"	"26"	"0"	"0.0007255"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNTFSPEGR"	"[R].gVNTFSPEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"646.84302"	"1292.67876"	"1292.67963"	"-0.67"	"-0.00044"	"9/94"	"9"	"94"	"5706845.67010498"	"HCD"	"MS2"	"2.26392"	"269.3"	"100.000"	"43.0960"	"12532"	"12532"	"12515"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"373.6"	""	"300.7"	""	"366.9"	""	"436.0"	""	"551.6"	"530.8"	""	"720"	"37"	"35.000"	"28.000"	"0.00800391560634504"	"18"	"0"	"0.0002811"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNTFSPEGR"	"[R].gVNTFSPEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"646.84314"	"1292.67900"	"1292.67963"	"-0.49"	"-0.00031"	"8/94"	"8"	"94"	"6554115.21563721"	"HCD"	"MS2"	"0"	"294.0"	"100.000"	"43.1881"	"12558"	"12558"	"12540"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"407.4"	""	"338.3"	""	"393.6"	""	"474.2"	""	"601.1"	"575.5"	""	"721"	"38"	"35.000"	"28.000"	"0.00541882678775454"	"18"	"0"	"0.000869"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNTFSPEGR"	"[R].gVNTFSPEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"646.84369"	"1292.68010"	"1292.67963"	"0.36"	"0.00024"	"8/94"	"8"	"94"	"2829872.65197754"	"HCD"	"MS2"	"10.72543"	"154.9"	"100.000"	"42.8844"	"12434"	"12434"	"12416"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"200.8"	""	"166.0"	""	"191.3"	""	"264.5"	""	"357.8"	"293.1"	""	"726"	"26"	"35.000"	"28.000"	"0.0918135172709951"	"28"	"0.0002479"	"0.005263"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNLSAIQDR"	"[K].mNLSAIQDR.[E]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"646.84381"	"1292.68035"	"1292.68300"	"-2.05"	"-0.00133"	"7/86"	"7"	"86"	"1765858.32281494"	"HCD"	"MS2"	"26.90654"	"90.7"	"100.000"	"39.6707"	"11136"	"11136"	"11110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"98.6"	""	"84.1"	""	"109.8"	""	"216.3"	"0.7"	"172.1"	"178.8"	""	"725"	"23"	"35.000"	"28.000"	"0.175108815739418"	"19"	"0.005001"	"0.0565"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNLSAIQDR"	"[K].mNLSAIQDR.[E]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"646.84497"	"1292.68266"	"1292.68300"	"-0.26"	"-0.00017"	"8/86"	"8"	"86"	"2019820.69470215"	"HCD"	"MS2"	"14.46983"	"105.0"	"100.000"	"39.9014"	"11221"	"11221"	"11196"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"123.7"	""	"89.8"	""	"111.4"	""	"274.7"	""	"224.2"	"179.8"	""	"783"	"30"	"35.000"	"28.000"	"0.0373879597427392"	"18"	"0.005427"	"0.06264"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVGTGEAGFR"	"[R].vAVGTGEAGFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"646.86133"	"1292.71538"	"1292.71602"	"-0.49"	"-0.00032"	"10/84"	"10"	"84"	"4486178.50817871"	"HCD"	"MS2"	"33.81292"	"154.2"	"100.000"	"52.7317"	"16451"	"16451"	"16434"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"167.1"	""	"171.9"	""	"195.1"	""	"292.1"	"4.8"	"306.9"	"326.5"	""	"952"	"38"	"36.000"	"29.000"	"0.00702436309839326"	"16"	"0"	"9.677E-05"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVGTGEAGFR"	"[R].vAVGTGEAGFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"646.86176"	"1292.71623"	"1292.71602"	"0.17"	"0.00011"	"9/84"	"9"	"84"	"1687805.42156982"	"HCD"	"MS2"	"16.60689"	"90.3"	"100.000"	"52.4465"	"16335"	"16335"	"16312"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"102.3"	""	"102.9"	""	"109.0"	""	"166.9"	""	"193.8"	"183.2"	""	"940"	"60"	"36.000"	"29.000"	"5.15344752187297E-05"	"21"	"0"	"6.604E-06"	"0.942"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVGTGEAGFR"	"[R].vAVGTGEAGFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.86182"	"1292.71636"	"1292.71602"	"0.26"	"0.00017"	"9/84"	"9"	"84"	"3833323.84350586"	"HCD"	"MS2"	"36.39882"	"130.7"	"100.000"	"53.0410"	"16566"	"16566"	"16547"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"147.3"	""	"144.6"	""	"151.6"	""	"242.2"	"5.2"	"265.9"	"285.3"	""	"936"	"31"	"36.000"	"29.000"	"0.0377785994156456"	"14"	"0"	"0.0001542"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVGTGEAGFR"	"[R].vAVGTGEAGFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.8871"	"0.0000"	"1"	"1"	"1"	"646.86194"	"1292.71660"	"1292.71602"	"0.45"	"0.00029"	"9/84"	"9"	"84"	"1784620.26342773"	"HCD"	"MS2"	"17.77114"	"96.3"	"100.000"	"52.7443"	"16445"	"16445"	"16423"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"110.5"	""	"115.6"	""	"116.9"	""	"182.9"	""	"195.4"	"193.9"	""	"936"	"62"	"36.000"	"29.000"	"3.12065567991975E-05"	"23"	"0"	"3.928E-05"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVQEAEK"	"[R].mVQEAEk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.1613"	"0.0000"	"1"	"1"	"1"	"646.86816"	"1292.72905"	"1292.72844"	"0.47"	"0.00030"	"6/60"	"6"	"60"	"14076610.7540894"	"HCD"	"MS2"	"4.789629"	"997.4"	"100.000"	"40.0639"	"11296"	"11296"	"11278"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1743.7"	""	"1334.3"	""	"1347.0"	""	"1331.2"	""	"1812.0"	"1880.2"	""	"938"	"31"	"36.000"	"29.000"	"0.0366583440351926"	""	"0.006769"	"0.07867"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVQEAEK"	"[R].mVQEAEk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.1935"	"0.0000"	"1"	"1"	"1"	"646.86841"	"1292.72954"	"1292.72844"	"0.85"	"0.00055"	"6/60"	"6"	"60"	"13571118.7816772"	"HCD"	"MS2"	"0"	"1070.8"	"100.000"	"40.2624"	"11368"	"11368"	"11352"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1819.2"	""	"1432.4"	""	"1497.1"	""	"1410.8"	""	"1923.8"	"2068.3"	""	"942"	"31"	"36.000"	"29.000"	"0.0372409633787918"	""	"0.007476"	"0.08933"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVQEAEK"	"[R].mVQEAEk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.3784"	"0.0000"	"1"	"1"	"1"	"646.86877"	"1292.73027"	"1292.72844"	"1.41"	"0.00091"	"12/60"	"12"	"60"	"12038643.5397949"	"HCD"	"MS2"	"0"	"530.2"	"56.107"	"40.5429"	"11483"	"11483"	"11469"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"854.6"	""	"696.4"	""	"765.7"	""	"583.0"	""	"1032.2"	"1099.1"	""	"960"	"37"	"36.000"	"29.000"	"0.0106228546061071"	""	"0.006308"	"0.07125"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVQEAEK"	"[R].mVQEAEk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.3784"	"0.0000"	"1"	"1"	"1"	"646.86920"	"1292.73113"	"1292.72844"	"2.08"	"0.00134"	"12/60"	"12"	"60"	"10901108.9767456"	"HCD"	"MS2"	"0"	"626.6"	"75.866"	"40.3539"	"11415"	"11415"	"11398"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1047.8"	""	"781.4"	""	"933.0"	""	"716.4"	""	"1184.5"	"1282.7"	""	"946"	"37"	"36.000"	"29.000"	"0.00995087202009542"	""	"0.006739"	"0.07605"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSEVESVK"	"[K].gSEVESVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.5484"	"0.0000"	"1"	"1"	"1"	"646.87598"	"1292.74468"	"1292.74620"	"-1.18"	"-0.00076"	"6/64"	"6"	"64"	"1840152.0748291"	"HCD"	"MS2"	"27.21397"	"157.7"	"100.000"	"37.0818"	"10086"	"10086"	"10059"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"206.8"	""	"207.1"	""	"208.5"	""	"248.7"	""	"314.8"	"312.6"	""	"890"	"31"	"36.000"	"29.000"	"0.0374420838032112"	"29"	"0.0008629"	"0.01104"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETADAISK"	"[K].eTADAISk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"0"	"2"	"2"	"0.7885"	"0.0000"	"1"	"1"	"1"	"646.87622"	"1292.74516"	"1292.74620"	"-0.80"	"-0.00052"	"7/68"	"7"	"68"	"11195039.4414673"	"HCD"	"MS2"	"3.614875"	"729.9"	"100.000"	"40.7609"	"11580"	"11580"	"11562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1038.5"	""	"763.6"	""	"886.4"	""	"1348.8"	""	"1378.3"	"1516.7"	""	"895"	"52"	"36.000"	"29.000"	"0.000292949687895105"	"27"	"0.0002479"	"0.005035"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSEVESVK"	"[K].gSEVESVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"646.87646"	"1292.74565"	"1292.74620"	"-0.42"	"-0.00027"	"7/64"	"7"	"64"	"2070662.49395752"	"HCD"	"MS2"	"27.31616"	"166.3"	"100.000"	"37.2461"	"10147"	"10147"	"10125"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"212.6"	""	"202.1"	""	"223.6"	""	"275.6"	""	"341.5"	"325.8"	""	"866"	"30"	"36.000"	"29.000"	"0.0401317313523259"	"27"	"0.001211"	"0.01496"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SLEAASEK"	"[K].sLEAASEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"431.58679"	"1292.74582"	"1292.74620"	"-0.29"	"-0.00013"	"8/68"	"8"	"68"	"4414527.77471924"	"HCD"	"MS2"	"57.91735"	"210.3"	"100.000"	"40.2479"	"11371"	"11371"	"11352"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"311.7"	""	"274.0"	""	"313.8"	""	"284.3"	""	"405.9"	"405.8"	""	"866"	"16"	"36.000"	"29.000"	"1.03869465393544"	"21"	"0.006685"	"0.07493"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETADAISK"	"[K].eTADAISk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"0"	"2"	"2"	"0.7885"	"0.0000"	"1"	"1"	"1"	"646.87689"	"1292.74651"	"1292.74620"	"0.24"	"0.00015"	"7/68"	"7"	"68"	"9719978.16912842"	"HCD"	"MS2"	"3.579351"	"668.7"	"100.000"	"40.9431"	"11645"	"11645"	"11630"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"952.0"	""	"723.5"	""	"793.8"	""	"1154.8"	""	"1333.3"	"1401.4"	""	"856"	"52"	"36.000"	"29.000"	"0.000294743182835351"	"27"	"0"	"0.003323"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNEGVIEFR"	"[R].tNEGVIEFR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V6S8"	"Serine/arginine-rich splicing factor 6 OS=Rattus norvegicus OX=10116 GN=Srsf6 PE=1 SV=1"	"G3V6S8"	"Serine/arginine-rich splicing factor 6 OS=Rattus norvegicus OX=10116 GN=Srsf6 PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"647.35260"	"1293.69792"	"1293.70003"	"-1.63"	"-0.00105"	"7/90"	"7"	"90"	"1113938.19940186"	"HCD"	"MS2"	"38.41036"	"89.8"	"100.000"	"58.5397"	"18803"	"18803"	"18783"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"112.9"	""	"99.5"	""	"115.0"	""	"154.0"	""	"193.9"	"184.1"	""	"852"	"18"	"36.000"	"29.000"	"0.742009728064828"	"19"	"0.000936"	"0.01199"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNEGVIEFR"	"[R].tNEGVIEFR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V6S8"	"Serine/arginine-rich splicing factor 6 OS=Rattus norvegicus OX=10116 GN=Srsf6 PE=1 SV=1"	"G3V6S8"	"Serine/arginine-rich splicing factor 6 OS=Rattus norvegicus OX=10116 GN=Srsf6 PE=1 SV=1"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"647.35315"	"1293.69902"	"1293.70003"	"-0.78"	"-0.00050"	"7/90"	"7"	"90"	"933376.319824219"	"HCD"	"MS2"	"19.71242"	"56.4"	"100.000"	"57.9756"	"18588"	"18588"	"18559"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"73.9"	""	"67.3"	""	"64.0"	""	"106.8"	"0.2"	"109.5"	"113.2"	""	"853"	"48"	"36.000"	"29.000"	"0.000742880631501523"	"20"	"0"	"0.0003514"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNEGVIEFR"	"[R].tNEGVIEFR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V6S8"	"Serine/arginine-rich splicing factor 6 OS=Rattus norvegicus OX=10116 GN=Srsf6 PE=1 SV=1"	"G3V6S8"	"Serine/arginine-rich splicing factor 6 OS=Rattus norvegicus OX=10116 GN=Srsf6 PE=1 SV=1"	"0"	"2"	"2"	"0.9038"	"0.0000"	"1"	"1"	"1"	"647.35345"	"1293.69963"	"1293.70003"	"-0.31"	"-0.00020"	"7/90"	"7"	"90"	"1259816.42480469"	"HCD"	"MS2"	"6.374224"	"73.4"	"100.000"	"58.2311"	"18677"	"18677"	"18655"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"105.2"	""	"80.2"	""	"82.2"	""	"139.4"	"1.1"	"144.7"	"143.5"	""	"877"	"52"	"36.000"	"29.000"	"0.00027037690831626"	"21"	"0"	"0.001531"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNEGVIEFR"	"[R].tNEGVIEFR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V6S8"	"Serine/arginine-rich splicing factor 6 OS=Rattus norvegicus OX=10116 GN=Srsf6 PE=1 SV=1"	"G3V6S8"	"Serine/arginine-rich splicing factor 6 OS=Rattus norvegicus OX=10116 GN=Srsf6 PE=1 SV=1"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"647.35345"	"1293.69963"	"1293.70003"	"-0.31"	"-0.00020"	"6/90"	"6"	"90"	"1414380.07055664"	"HCD"	"MS2"	"6.924178"	"97.8"	"100.000"	"58.2686"	"18707"	"18707"	"18687"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"131.4"	""	"111.0"	""	"119.5"	""	"179.4"	""	"193.0"	"194.5"	""	"877"	"43"	"36.000"	"29.000"	"0.00198595588787738"	"20"	"0"	"0.0004495"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVnDMk.[S]"	"N-Term(TMT6plex); N4(Deamidated); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"647.35938"	"1293.71147"	"1293.71246"	"-0.76"	"-0.00049"	"12/62"	"12"	"62"	"563629.62298584"	"HCD"	"MS2"	"44.6015"	"44.9"	"100.000"	"68.2843"	"22743"	"22743"	"22719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"64.9"	""	"47.5"	""	"63.7"	""	"71.8"	""	"87.8"	"90.7"	""	"901"	"36"	"36.000"	"29.000"	"0.0124938070714565"	"27"	"0.001134"	"0.01403"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEADLEK"	"[K].mEADLEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"647.35986"	"1293.71245"	"1293.71246"	"-0.01"	"0.00000"	"6/56"	"6"	"56"	"1153971.95251465"	"HCD"	"MS2"	"18.38523"	"96.7"	"100.000"	"56.7204"	"18076"	"18076"	"18054"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"152.8"	""	"115.9"	""	"137.7"	""	"118.6"	""	"193.2"	"200.6"	""	"894"	"31"	"36.000"	"29.000"	"0.0320116104365167"	"26"	"0.002973"	"0.02904"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVnDMk.[S]"	"N-Term(TMT6plex); N4(Deamidated); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"647.36005"	"1293.71282"	"1293.71246"	"0.28"	"0.00018"	"12/62"	"12"	"62"	"535157.653869629"	"HCD"	"MS2"	"50.20591"	"46.6"	"100.000"	"68.4493"	"22796"	"22796"	"22773"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"70.7"	""	"51.2"	""	"57.6"	""	"70.2"	""	"85.6"	"108.4"	""	"899"	"38"	"36.000"	"29.000"	"0.0078294218958953"	"28"	"0.0006732"	"0.008635"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEADLEK"	"[K].mEADLEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"647.36029"	"1293.71330"	"1293.71246"	"0.65"	"0.00042"	"6/56"	"6"	"56"	"1112740.23474121"	"HCD"	"MS2"	"14.34202"	"96.6"	"100.000"	"56.8699"	"18123"	"18123"	"18099"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"154.3"	""	"130.6"	""	"120.7"	""	"117.1"	""	"189.5"	"205.3"	""	"889"	"31"	"36.000"	"29.000"	"0.0323498123116618"	"24"	"0.003111"	"0.03149"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYEYYASR"	"[R].nYEYYASR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1N4"	"3'(2'),5'-bisphosphate nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Bpnt1 PE=1 SV=1"	"Q9Z1N4"	"3'(2'),5'-bisphosphate nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Bpnt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"647.81592"	"1294.62456"	"1294.62653"	"-1.52"	"-0.00099"	"6/78"	"6"	"78"	"2051289.66937256"	"HCD"	"MS2"	"6.884556"	"127.6"	"100.000"	"41.8885"	"12038"	"12038"	"12015"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"189.9"	""	"171.1"	""	"225.4"	""	"164.8"	""	"221.9"	"235.0"	""	"430"	"30"	"33.000"	"26.000"	"0.0201575831489064"	"19"	"0.0004639"	"0.008044"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYEYYASR"	"[R].nYEYYASR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1N4"	"3'(2'),5'-bisphosphate nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Bpnt1 PE=1 SV=1"	"Q9Z1N4"	"3'(2'),5'-bisphosphate nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Bpnt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"647.81659"	"1294.62590"	"1294.62653"	"-0.49"	"-0.00032"	"6/78"	"6"	"78"	"2118697.87451172"	"HCD"	"MS2"	"4.669679"	"124.4"	"100.000"	"42.0408"	"12090"	"12090"	"12065"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"192.7"	""	"169.2"	""	"209.2"	""	"163.4"	"0.8"	"222.7"	"219.6"	""	"470"	"31"	"33.000"	"26.000"	"0.0183260075972966"	"18"	"0.0004639"	"0.007753"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLGDEETVR"	"[R].fLGDEETVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16290"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2"	"P16290"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"647.84570"	"1294.68413"	"1294.68405"	"0.06"	"0.00004"	"14/70"	"14"	"70"	"1862478.67126465"	"HCD"	"MS2"	"0"	"108.0"	"100.000"	"60.2089"	"19468"	"19468"	"19452"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"191.3"	""	"111.3"	""	"100.0"	""	"111.0"	"2.4"	"102.6"	"405.8"	""	"818"	"39"	"36.000"	"29.000"	"0.00518469613135859"	"21"	"0"	"0.0006263"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGTLNLDR"	"[K].yNGTLNLDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"647.85077"	"1294.69426"	"1294.69528"	"-0.79"	"-0.00051"	"7/86"	"7"	"86"	"1582449.82781982"	"HCD"	"MS2"	"0"	"94.4"	"100.000"	"54.8627"	"17318"	"17318"	"17300"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"184.0"	""	"131.4"	""	"145.6"	""	"127.2"	"1.4"	"132.2"	"169.4"	""	"803"	"56"	"36.000"	"29.000"	"0.000105120047779992"	"24"	"0"	"0.0002981"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGTLNLDR"	"[K].yNGTLNLDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"647.85132"	"1294.69536"	"1294.69528"	"0.06"	"0.00004"	"7/86"	"7"	"86"	"1308876.44604492"	"HCD"	"MS2"	"0"	"78.2"	"100.000"	"55.0418"	"17377"	"17377"	"17361"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"135.4"	""	"100.4"	""	"123.5"	""	"102.5"	"3.6"	"130.2"	"143.9"	""	"854"	"56"	"36.000"	"29.000"	"0.000113090955918506"	"24"	"0"	"0.0001851"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESPSGTMK"	"[R].eSPSGTMk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"647.85516"	"1294.70305"	"1294.70771"	"-3.60"	"-0.00233"	"7/66"	"7"	"66"	"2483946.94488525"	"HCD"	"MS2"	"9.338163"	"226.4"	"100.000"	"31.9022"	"7987"	"7987"	"7971"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"369.6"	""	"320.0"	""	"326.3"	""	"295.8"	""	"401.5"	"433.1"	""	"847"	"31"	"36.000"	"29.000"	"0.0362120752906663"	"25"	"0.000936"	"0.01288"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAEIATYR"	"[K].lEAEIATYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"647.86243"	"1294.71758"	"1294.72043"	"-2.21"	"-0.00143"	"6/74"	"6"	"74"	"1625658.09033203"	"HCD"	"MS2"	"0"	"79.5"	"100.000"	"70.9579"	"23833"	"23833"	"23809"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"96.9"	""	"103.0"	""	"110.1"	""	"129.6"	"2.5"	"137.7"	"174.4"	""	"816"	"44"	"36.000"	"29.000"	"0.00169691529081561"	"18"	"0"	"0.0005248"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAEIATYR"	"[K].lEAEIATYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"647.86249"	"1294.71770"	"1294.72043"	"-2.11"	"-0.00137"	"7/74"	"7"	"74"	"3228528.90716553"	"HCD"	"MS2"	"0.7456228"	"139.5"	"100.000"	"71.2479"	"23952"	"23952"	"23935"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"170.0"	""	"184.3"	""	"213.1"	""	"186.8"	""	"263.0"	"308.7"	""	"816"	"32"	"36.000"	"29.000"	"0.0262821060330192"	"17"	"0"	"0.002209"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAEIATYR"	"[K].lEAEIATYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"647.86279"	"1294.71831"	"1294.72043"	"-1.64"	"-0.00106"	"6/74"	"6"	"74"	"627921.114135742"	"HCD"	"MS2"	"41.6418"	"35.2"	"100.000"	"71.0058"	"23839"	"23839"	"23813"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.8"	""	"43.4"	""	"50.9"	""	"55.1"	""	"62.1"	"74.8"	""	"838"	"43"	"36.000"	"29.000"	"0.00212918806432875"	"18"	"0"	"0.000384"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAEIATYR"	"[K].lEAEIATYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"647.86328"	"1294.71929"	"1294.72043"	"-0.89"	"-0.00057"	"7/74"	"7"	"74"	"4371888.91162109"	"HCD"	"MS2"	"1.031516"	"183.1"	"100.000"	"71.2911"	"23956"	"23956"	"23939"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"235.9"	""	"240.8"	""	"275.5"	""	"273.9"	""	"322.0"	"389.2"	""	"837"	"31"	"36.000"	"29.000"	"0.0369568938325168"	"17"	"0"	"0.002283"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYAWDNR"	"[K].eLYAWDNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZUI5"	"Protein cordon-bleu OS=Rattus norvegicus OX=10116 GN=Cobl PE=1 SV=1"	"D3ZUI5"	"Protein cordon-bleu OS=Rattus norvegicus OX=10116 GN=Cobl PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"648.33112"	"1295.65495"	"1295.65817"	"-2.48"	"-0.00161"	"6/68"	"6"	"68"	"311831.004577637"	"HCD"	"MS2"	"19.64001"	"22.0"	"100.000"	"66.9556"	"22203"	"22203"	"22172"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.1"	""	"28.7"	""	"27.6"	""	"30.6"	""	"45.1"	"54.6"	""	"596"	"33"	"34.000"	"27.000"	"0.0167577714906724"	"22"	"0.0008629"	"0.009897"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYAWDNR"	"[K].eLYAWDNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZUI5"	"Protein cordon-bleu OS=Rattus norvegicus OX=10116 GN=Cobl PE=1 SV=1"	"D3ZUI5"	"Protein cordon-bleu OS=Rattus norvegicus OX=10116 GN=Cobl PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"648.33282"	"1295.65837"	"1295.65817"	"0.16"	"0.00010"	"5/68"	"5"	"68"	"241371.219726563"	"HCD"	"MS2"	"11.48181"	"19.4"	"100.000"	"67.1902"	"22283"	"22283"	"22258"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.0"	""	"17.1"	""	"24.8"	""	"30.0"	""	"44.7"	"45.4"	""	"633"	"18"	"35.000"	"28.000"	"0.560239485307464"	"19"	"0.006254"	"0.07102"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGTLNLDR"	"[K].ynGTLNLDR.[A]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"648.34241"	"1295.67754"	"1295.67930"	"-1.36"	"-0.00088"	"8/86"	"8"	"86"	"2678591.10186768"	"HCD"	"MS2"	"0"	"152.0"	"100.000"	"59.9945"	"19383"	"19383"	"19377"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"240.9"	""	"170.2"	""	"199.2"	""	"251.7"	""	"277.4"	"302.9"	""	"709"	"36"	"35.000"	"28.000"	"0.00884333830701277"	"23"	"0"	"0.001754"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGTLNLDR"	"[K].ynGTLNLDR.[A]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"648.34247"	"1295.67766"	"1295.67930"	"-1.26"	"-0.00082"	"6/86"	"6"	"86"	"489248.155944824"	"HCD"	"MS2"	"0"	"32.5"	"100.000"	"62.2877"	"20292"	"20292"	"20274"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.3"	""	"39.5"	""	"45.6"	""	"45.6"	""	"61.3"	"62.5"	""	"708"	"15"	"35.000"	"28.000"	"1.07152735354786"	"20"	"0.004606"	"0.04942"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGTLNLDR"	"[K].ynGTLNLDR.[A]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"648.34247"	"1295.67766"	"1295.67930"	"-1.26"	"-0.00082"	"7/86"	"7"	"86"	"2550767.3168335"	"HCD"	"MS2"	"22.47411"	"150.0"	"100.000"	"59.7265"	"19289"	"19289"	"19286"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"252.1"	""	"170.9"	""	"196.9"	""	"230.5"	"0.4"	"260.2"	"309.5"	""	"708"	"42"	"35.000"	"28.000"	"0.0020989556490132"	"24"	"0"	"0.0008734"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGTLNLDR"	"[K].ynGTLNLDR.[A]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.0667"	"0.0000"	"1"	"1"	"1"	"648.34271"	"1295.67815"	"1295.67930"	"-0.89"	"-0.00057"	"7/86"	"7"	"86"	"636111.681884766"	"HCD"	"MS2"	"0"	"38.9"	"100.000"	"62.2236"	"20282"	"20282"	"20263"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.2"	""	"46.5"	""	"52.8"	""	"55.6"	""	"76.9"	"70.8"	""	"707"	"15"	"35.000"	"28.000"	"1.18956839774236"	"20"	"0.006639"	"0.07417"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGTLNLDR"	"[K].ynGTLNLDR.[A]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"648.34271"	"1295.67815"	"1295.67930"	"-0.89"	"-0.00057"	"7/86"	"7"	"86"	"3729508.54693604"	"HCD"	"MS2"	"16.2644"	"187.3"	"100.000"	"60.6058"	"19612"	"19612"	"19605"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"324.6"	""	"183.3"	""	"238.2"	""	"275.1"	""	"372.5"	"386.8"	""	"707"	"46"	"35.000"	"28.000"	"0.0009276612550864"	"27"	"0"	"0.0003847"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIDYNGER"	"[R].tVIDYNGER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"648.34283"	"1295.67839"	"1295.67930"	"-0.70"	"-0.00045"	"7/84"	"7"	"84"	"5049459.63397217"	"HCD"	"MS2"	"4.062874"	"248.2"	"100.000"	"44.7181"	"13186"	"13186"	"13169"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"431.2"	""	"333.4"	""	"391.1"	""	"350.7"	"4.0"	"413.6"	"422.6"	""	"700"	"39"	"35.000"	"28.000"	"0.0040000741717642"	"18"	"0"	"0.000937"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGTLNLDR"	"[K].ynGTLNLDR.[A]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"648.34308"	"1295.67888"	"1295.67930"	"-0.32"	"-0.00021"	"6/86"	"6"	"86"	"2509703.10546875"	"HCD"	"MS2"	"20.7989"	"118.8"	"100.000"	"60.6816"	"19658"	"19658"	"19641"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"198.6"	""	"125.0"	""	"154.2"	""	"178.8"	""	"226.0"	"244.3"	""	"762"	"30"	"35.000"	"28.000"	"0.0350691286837959"	"25"	"0"	"0.001171"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIDYNGER"	"[R].tVIDYNGER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"648.34308"	"1295.67888"	"1295.67930"	"-0.32"	"-0.00021"	"7/84"	"7"	"84"	"4910023.14129639"	"HCD"	"MS2"	"5.169061"	"252.7"	"100.000"	"44.8610"	"13233"	"13233"	"13216"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"453.6"	""	"339.0"	""	"384.9"	""	"354.6"	""	"408.1"	"450.2"	""	"762"	"38"	"35.000"	"28.000"	"0.0055708950346801"	"16"	"0"	"0.0005967"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGTLNLDR"	"[K].ynGTLNLDR.[A]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"648.34320"	"1295.67912"	"1295.67930"	"-0.13"	"-0.00009"	"7/86"	"7"	"86"	"3457443.09136963"	"HCD"	"MS2"	"6.116976"	"176.2"	"100.000"	"60.3830"	"19537"	"19537"	"19528"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"300.7"	""	"166.4"	""	"225.4"	""	"253.2"	""	"330.6"	"396.3"	""	"762"	"46"	"35.000"	"28.000"	"0.00100213210491214"	"27"	"0"	"0.0005968"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDmLk.[I]"	"N-Term(TMT6plex); M5(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"648.36737"	"1295.72746"	"1295.72811"	"-0.50"	"-0.00032"	"10/54"	"10"	"54"	"5180006.56481934"	"HCD"	"MS2"	"1.346733"	"287.9"	"100.000"	"48.2985"	"14644"	"14644"	"14626"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"297.9"	""	"260.5"	""	"291.1"	""	"657.7"	""	"624.8"	"611.9"	""	"757"	"23"	"35.000"	"28.000"	"0.208001220755111"	"24"	"0.009081"	"0.1169"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDmLk.[I]"	"N-Term(TMT6plex); M5(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"648.36768"	"1295.72807"	"1295.72811"	"-0.03"	"-0.00002"	"10/54"	"10"	"54"	"7971481.13830566"	"HCD"	"MS2"	"0.2676325"	"431.5"	"100.000"	"48.5897"	"14750"	"14750"	"14732"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"411.0"	""	"390.6"	""	"446.6"	""	"1055.0"	""	"886.8"	"915.6"	""	"757"	"21"	"35.000"	"28.000"	"0.295846124036683"	"24"	"0.008522"	"0.1054"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQAVDYDGSR"	"[K].gQAVDYDGSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"648.82062"	"1296.63396"	"1296.63816"	"-3.24"	"-0.00210"	"6/96"	"6"	"96"	"236244.444152832"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"29.1793"	"6872"	"6872"	"6843"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.0"	""	"24.8"	""	"20.9"	""	"31.0"	""	"39.9"	"32.8"	""	"449"	"17"	"33.000"	"26.000"	"0.487771414654911"	"19"	"0.003653"	"0.03788"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIDYNGER"	"[R].tVIDYnGER.[T]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"648.83459"	"1296.66191"	"1296.66331"	"-1.08"	"-0.00070"	"7/84"	"7"	"84"	"1671717.15673828"	"HCD"	"MS2"	"41.54933"	"100.1"	"100.000"	"48.4943"	"14724"	"14724"	"14704"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"140.2"	""	"112.5"	""	"118.9"	""	"187.8"	""	"193.4"	"196.7"	""	"630"	"29"	"34.000"	"27.000"	"0.03875346628059"	"18"	"0"	"0.0007291"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIDYNGER"	"[R].tVIDYnGER.[T]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"648.83508"	"1296.66289"	"1296.66331"	"-0.33"	"-0.00021"	"5/84"	"5"	"84"	"545233.629150391"	"HCD"	"MS2"	"21.94442"	"33.0"	"100.000"	"47.6269"	"14359"	"14359"	"14337"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.8"	""	"38.0"	""	"42.4"	""	"58.0"	""	"62.7"	"61.9"	""	"634"	"19"	"35.000"	"28.000"	"0.435571306078968"	"19"	"0.002379"	"0.02484"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIDYNGER"	"[R].tVIDYnGER.[T]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"648.83521"	"1296.66313"	"1296.66331"	"-0.14"	"-0.00009"	"7/84"	"7"	"84"	"2662939.44061279"	"HCD"	"MS2"	"13.79212"	"135.5"	"100.000"	"47.0501"	"14135"	"14135"	"14110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"213.8"	""	"162.1"	""	"145.9"	""	"176.3"	"4.7"	"382.4"	"204.1"	""	"633"	"42"	"35.000"	"28.000"	"0.00202942830989204"	"21"	"0"	"0.0006664"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIDYNGER"	"[R].tVIDYnGER.[T]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"648.83527"	"1296.66326"	"1296.66331"	"-0.04"	"-0.00003"	"5/84"	"5"	"84"	"662881.44543457"	"HCD"	"MS2"	"16.79957"	"39.6"	"100.000"	"47.3607"	"14262"	"14262"	"14238"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.7"	""	"48.0"	""	"50.4"	""	"65.4"	"0.4"	"76.8"	"70.1"	""	"640"	"18"	"35.000"	"28.000"	"0.481005429148807"	"16"	"0.003111"	"0.03059"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIDYNGER"	"[R].tVIDYnGER.[T]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"648.83527"	"1296.66326"	"1296.66331"	"-0.04"	"-0.00003"	"12/84"	"12"	"84"	"2332159.01794434"	"HCD"	"MS2"	"15.25157"	"113.4"	"100.000"	"47.3070"	"14228"	"14228"	"14209"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"201.2"	""	"128.1"	""	"143.2"	""	"146.0"	""	"277.0"	"187.3"	""	"640"	"48"	"35.000"	"28.000"	"0.000554817279281324"	"23"	"0"	"0.0009601"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIDYNGER"	"[R].tVIDYnGER.[T]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"648.83539"	"1296.66350"	"1296.66331"	"0.14"	"0.00009"	"7/84"	"7"	"84"	"1947296.85040283"	"HCD"	"MS2"	"36.75388"	"106.1"	"100.000"	"48.8202"	"14844"	"14844"	"14824"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"146.8"	""	"104.8"	""	"131.2"	""	"210.4"	""	"203.7"	"210.8"	""	"644"	"30"	"35.000"	"28.000"	"0.0334854293396957"	"16"	"0"	"0.0006291"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSADQGSYR"	"[R].aLSADQGSYR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"648.84009"	"1296.67290"	"1296.67454"	"-1.27"	"-0.00082"	"8/90"	"8"	"90"	"974320.592895508"	"HCD"	"MS2"	"0"	"64.3"	"100.000"	"35.6801"	"9512"	"9512"	"9487"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"77.4"	""	"67.9"	""	"74.4"	""	"104.2"	""	"147.5"	"140.6"	""	"675"	"51"	"35.000"	"28.000"	"0.000298039466391265"	"16"	"0"	"4.504E-05"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSADQGSYR"	"[R].aLSADQGSYR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"648.84027"	"1296.67327"	"1296.67454"	"-0.99"	"-0.00064"	"8/90"	"8"	"90"	"1119058.62426758"	"HCD"	"MS2"	"0"	"70.4"	"100.000"	"35.5798"	"9475"	"9475"	"9457"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"85.5"	""	"78.7"	""	"87.1"	""	"124.9"	""	"141.4"	"156.8"	""	"670"	"51"	"35.000"	"28.000"	"0.000258252662136584"	"16"	"0"	"0.0002477"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDELQLFR"	"[K].mDELQLFR.[G]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"648.84418"	"1296.68108"	"1296.68194"	"-0.66"	"-0.00043"	"7/64"	"7"	"64"	"900094.488891602"	"HCD"	"MS2"	"3.251745"	"36.2"	"100.000"	"80.3763"	"27632"	"27632"	"27613"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.8"	""	"33.4"	""	"47.2"	""	"80.0"	"1.1"	"73.5"	"67.3"	""	"689"	"23"	"35.000"	"28.000"	"0.175060927962113"	"18"	"0.005119"	"0.05781"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDELQLFR"	"[K].mDELQLFR.[G]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"648.84424"	"1296.68120"	"1296.68194"	"-0.57"	"-0.00037"	"5/64"	"5"	"64"	"1124206.21716309"	"HCD"	"MS2"	"35.94852"	"48.0"	"100.000"	"80.0768"	"27514"	"27514"	"27504"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.8"	""	"48.1"	""	"56.4"	""	"127.7"	""	"93.9"	"71.9"	""	"694"	"11"	"35.000"	"28.000"	"2.86635168503281"	"16"	"0.00912"	"0.1179"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDELQLFR"	"[K].mDELQLFR.[G]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"648.84430"	"1296.68132"	"1296.68194"	"-0.48"	"-0.00031"	"7/64"	"7"	"64"	"1160928.88781738"	"HCD"	"MS2"	"38.58483"	"48.8"	"100.000"	"80.0902"	"27516"	"27516"	"27498"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.0"	""	"51.0"	""	"57.0"	""	"128.8"	""	"90.5"	"70.7"	""	"694"	"14"	"35.000"	"28.000"	"1.24259463674615"	"19"	"0.006958"	"0.08029"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMPHDLAR"	"[K].dLMPHDLAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.7561"	"0.0000"	"1"	"1"	"1"	"432.90182"	"1296.69092"	"1296.69317"	"-1.74"	"-0.00075"	"6/74"	"6"	"74"	"1219179.19378662"	"HCD"	"MS2"	"29.67108"	"33.4"	"100.000"	"50.9880"	"15729"	"15729"	"15698"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.0"	""	"47.1"	""	"39.3"	""	"53.0"	"0.6"	"62.3"	"65.9"	""	"670"	"41"	"35.000"	"28.000"	"0.00279927011107468"	"25"	"0"	"0.001483"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMPHDLAR"	"[K].dLMPHDLAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"432.90182"	"1296.69092"	"1296.69317"	"-1.74"	"-0.00075"	"8/74"	"8"	"74"	"2098936.55187988"	"HCD"	"MS2"	"30.05407"	"45.6"	"100.000"	"50.7135"	"15628"	"15628"	"15604"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"72.6"	""	"61.2"	""	"69.0"	""	"55.5"	"2.7"	"81.8"	"88.6"	""	"670"	"26"	"35.000"	"28.000"	"0.0783510474950884"	"24"	"0"	"0.003427"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMPHDLAR"	"[K].dLMPHDLAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"432.90216"	"1296.69193"	"1296.69317"	"-0.96"	"-0.00041"	"6/74"	"6"	"74"	"3476786.86004639"	"HCD"	"MS2"	"12.12654"	"73.0"	"100.000"	"50.9921"	"15741"	"15741"	"15726"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"116.5"	""	"109.2"	""	"108.8"	""	"88.7"	""	"138.8"	"134.5"	""	"659"	"38"	"35.000"	"28.000"	"0.00576574483901824"	"24"	"0"	"0.001287"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMPHDLAR"	"[K].dLMPHDLAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"432.90234"	"1296.69248"	"1296.69317"	"-0.54"	"-0.00023"	"6/74"	"6"	"74"	"3979823.15447998"	"HCD"	"MS2"	"9.978962"	"80.2"	"100.000"	"51.2968"	"15855"	"15855"	"15839"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"131.0"	""	"130.6"	""	"106.4"	""	"96.6"	""	"140.7"	"155.0"	""	"683"	"44"	"35.000"	"28.000"	"0.00152191608827747"	"27"	"0"	"0.001278"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMPHDLAR"	"[K].dLMPHDLAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.5455"	"0.0000"	"1"	"1"	"1"	"432.90247"	"1296.69284"	"1296.69317"	"-0.25"	"-0.00011"	"7/74"	"7"	"74"	"718916.24017334"	"HCD"	"MS2"	"38.05497"	"37.0"	"100.000"	"51.6330"	"15992"	"15992"	"15963"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.8"	""	"51.4"	""	"53.1"	""	"44.9"	""	"74.7"	"82.4"	""	"671"	"11"	"35.000"	"28.000"	"2.53333442381753"	"18"	"0.006129"	"0.06979"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENYPLYIR"	"[K].eNYPLYIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"B2RYU6"	"Trafficking protein particle complex subunit 2-like protein OS=Rattus norvegicus OX=10116 GN=Trappc2l PE=2 SV=1"	"B2RYU6"	"Trafficking protein particle complex subunit 2-like protein OS=Rattus norvegicus OX=10116 GN=Trappc2l PE=2 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"648.86090"	"1296.71453"	"1296.71495"	"-0.33"	"-0.00021"	"6/68"	"6"	"68"	"331581.74609375"	"HCD"	"MS2"	"0"	"22.5"	"100.000"	"67.3686"	"22371"	"22371"	"22347"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.4"	""	"26.2"	""	"33.1"	""	"29.6"	""	"49.8"	"39.3"	""	"653"	"25"	"35.000"	"28.000"	"0.104684693445103"	"18"	"0.001812"	"0.02081"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQGFETK"	"[R].eQGFETk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"3"	"648.86316"	"1296.71904"	"1296.71999"	"-0.73"	"-0.00047"	"6/68"	"6"	"68"	"4082090.6940918"	"HCD"	"MS2"	"3.93476"	"338.4"	"100.000"	"40.5468"	"11493"	"11493"	"11475"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"622.2"	""	"444.3"	""	"460.7"	""	"508.0"	""	"613.5"	"556.8"	""	"641"	"38"	"35.000"	"28.000"	"0.00506789996586158"	"28"	"0.004069"	"0.04459"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQGFETK"	"[R].eQGFETk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"3"	"648.86359"	"1296.71990"	"1296.71999"	"-0.07"	"-0.00005"	"6/68"	"6"	"68"	"4198224.28985596"	"HCD"	"MS2"	"0"	"344.2"	"100.000"	"40.7360"	"11560"	"11560"	"11541"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"639.0"	""	"410.8"	""	"465.5"	""	"547.0"	""	"631.0"	"564.0"	""	"617"	"38"	"34.000"	"27.000"	"0.00485573713687828"	""	"0.00413"	"0.04522"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPAAPVSIQR"	"[K].ePAAPVSIQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"648.87659"	"1296.74590"	"1296.74732"	"-1.09"	"-0.00071"	"8/86"	"8"	"86"	"1839964.20202637"	"HCD"	"MS2"	"56.53117"	"82.5"	"100.000"	"45.7722"	"13603"	"13603"	"13581"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"98.5"	""	"66.2"	""	"93.0"	""	"169.9"	"1.1"	"185.6"	"169.6"	""	"483"	"13"	"33.000"	"26.000"	"1.35181460761069"	"18"	"0.0008629"	"0.01025"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPAAPVSIQR"	"[K].ePAAPVSIQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"648.87659"	"1296.74590"	"1296.74732"	"-1.09"	"-0.00071"	"8/86"	"8"	"86"	"3069079.18109131"	"HCD"	"MS2"	"51.68573"	"112.9"	"100.000"	"45.5466"	"13523"	"13523"	"13507"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"140.2"	""	"101.0"	""	"101.5"	""	"249.5"	""	"247.9"	"234.8"	""	"483"	"19"	"33.000"	"26.000"	"0.299859032283567"	"19"	"0"	"0.002042"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPAAPVSIQR"	"[K].ePAAPVSIQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"648.87683"	"1296.74639"	"1296.74732"	"-0.72"	"-0.00047"	"8/86"	"8"	"86"	"4808232.00952148"	"HCD"	"MS2"	"59.53139"	"169.0"	"100.000"	"45.2658"	"13409"	"13409"	"13383"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"223.5"	""	"153.1"	""	"166.3"	""	"363.6"	"0.4"	"360.6"	"338.3"	""	"473"	"15"	"33.000"	"26.000"	"0.715865025745959"	"17"	"0"	"0.0005543"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAGTYDAK"	"[K].nAGTYDAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"649.36133"	"1297.71538"	"1297.71524"	"0.11"	"0.00007"	"7/74"	"7"	"74"	"2671829.80950928"	"HCD"	"MS2"	"0"	"233.3"	"100.000"	"31.6225"	"7864"	"7864"	"7837"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"380.0"	""	"342.2"	"2.8"	"398.7"	""	"456.4"	""	"314.9"	"306.6"	""	"616"	"38"	"34.000"	"27.000"	"0.00474843739508464"	"20"	"0.0001301"	"0.004374"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYEEGLK"	"[R].tYEEGLk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"649.37384"	"1297.74040"	"1297.74039"	"0.01"	"0.00001"	"6/54"	"6"	"54"	"2248078.13439941"	"HCD"	"MS2"	"14.79016"	"177.6"	"100.000"	"47.7081"	"14404"	"14404"	"14381"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"222.9"	""	"195.5"	""	"197.1"	""	"328.7"	""	"376.2"	"366.8"	""	"473"	"30"	"33.000"	"26.000"	"0.0248788983159192"	"16"	"0.003111"	"0.03073"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYEEGLK"	"[R].tYEEGLk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"649.37469"	"1297.74211"	"1297.74039"	"1.33"	"0.00086"	"6/54"	"6"	"54"	"1307647.69042969"	"HCD"	"MS2"	"34.07553"	"113.1"	"100.000"	"47.9836"	"14504"	"14504"	"14483"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"139.0"	""	"113.7"	""	"141.3"	""	"210.6"	"1.8"	"253.8"	"214.4"	""	"480"	"30"	"33.000"	"26.000"	"0.0216875873693352"	"21"	"0.002937"	"0.02781"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSWLGNDDR"	"[-].mFSWLGNDDR.[R]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"649.77643"	"1298.54558"	"1298.54701"	"-1.10"	"-0.00072"	"5/90"	"5"	"90"	"142888.755126953"	"HCD"	"MS2"	"40.9956"	"7.3"	"100.000"	"105.5752"	"36681"	"36681"	"36668"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.6"	""	"12.0"	""	"13.8"	""	"10.3"	""	"9.4"	"13.3"	"NoQuanLabels"	"69"	"16"	"25.000"	"18.000"	"0.0810623323192666"	"14"	"0.001374"	"0.01805"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSWLGNDDR"	"[-].mFSWLGNDDR.[R]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"649.77716"	"1298.54704"	"1298.54701"	"0.02"	"0.00002"	"4/90"	"4"	"90"	"124095.442993164"	"HCD"	"MS2"	"40.10865"	"8.3"	"100.000"	"105.5365"	"36736"	"36736"	"36724"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.6"	""	"8.0"	""	"11.8"	""	"18.8"	""	"7.2"	"17.6"	"NoQuanLabels"	"75"	"18"	"25.000"	"18.000"	"0.0595705030724167"	"14"	"0.000936"	"0.01334"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETTESIFSR"	"[R].eTTESIFSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"649.84174"	"1298.67620"	"1298.67896"	"-2.13"	"-0.00138"	"7/78"	"7"	"78"	"2058096.19366455"	"HCD"	"MS2"	"3.598501"	"108.0"	"100.000"	"54.0439"	"16988"	"16988"	"16971"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"162.9"	""	"116.0"	""	"134.1"	""	"173.8"	""	"221.3"	"217.5"	""	"563"	"46"	"34.000"	"27.000"	"0.000669080540684902"	"24"	"0"	"0.0008201"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETTESIFSR"	"[R].eTTESIFSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"649.84241"	"1298.67754"	"1298.67896"	"-1.10"	"-0.00071"	"7/78"	"7"	"78"	"1941058.31439209"	"HCD"	"MS2"	"0"	"104.7"	"100.000"	"54.2468"	"17059"	"17059"	"17040"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"147.2"	""	"120.2"	""	"115.0"	""	"184.4"	""	"214.9"	"212.4"	""	"575"	"44"	"34.000"	"27.000"	"0.00111593230222311"	"25"	"0"	"0.0005022"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATETVELHK"	"[M].aTETVELHk.[L]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q498U4"	"SAP domain-containing ribonucleoprotein OS=Rattus norvegicus OX=10116 GN=Sarnp PE=1 SV=3"	"Q498U4"	"SAP domain-containing ribonucleoprotein OS=Rattus norvegicus OX=10116 GN=Sarnp PE=1 SV=3"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"649.86102"	"1298.71477"	"1298.71535"	"-0.45"	"-0.00029"	"7/72"	"7"	"72"	"2103573.58587646"	"HCD"	"MS2"	"27.23771"	"73.8"	"100.000"	"51.6976"	"16018"	"16018"	"15995"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.0"	""	"99.8"	""	"106.3"	""	"128.4"	""	"142.3"	"141.3"	""	"514"	"42"	"34.000"	"27.000"	"0.00180274011693933"	"20"	"0.0002479"	"0.005698"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATETVELHK"	"[M].aTETVELHk.[L]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q498U4"	"SAP domain-containing ribonucleoprotein OS=Rattus norvegicus OX=10116 GN=Sarnp PE=1 SV=3"	"Q498U4"	"SAP domain-containing ribonucleoprotein OS=Rattus norvegicus OX=10116 GN=Sarnp PE=1 SV=3"	"0"	"2"	"2"	"0.9400"	"0.0000"	"1"	"1"	"1"	"649.86108"	"1298.71489"	"1298.71535"	"-0.35"	"-0.00023"	"7/72"	"7"	"72"	"2004279.199646"	"HCD"	"MS2"	"17.75406"	"73.2"	"100.000"	"51.3747"	"15897"	"15897"	"15877"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.9"	""	"89.7"	""	"112.5"	""	"127.9"	""	"142.9"	"137.8"	""	"514"	"50"	"34.000"	"27.000"	"0.000239846355304827"	"19"	"0"	"0.001153"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIIDPVLDR"	"[K].eIIDPVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"649.87866"	"1298.75005"	"1298.75173"	"-1.30"	"-0.00084"	"5/78"	"5"	"78"	"546323.970275879"	"HCD"	"MS2"	"22.94276"	"25.5"	"100.000"	"79.2646"	"27188"	"27188"	"27169"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.1"	""	"33.8"	""	"30.2"	""	"44.0"	""	"44.5"	"50.1"	""	"483"	"36"	"33.000"	"26.000"	"0.00570055493313108"	"25"	"0"	"0.0004594"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIIDPVLDR"	"[K].eIIDPVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"649.87897"	"1298.75066"	"1298.75173"	"-0.83"	"-0.00054"	"7/78"	"7"	"78"	"7063481.63702393"	"HCD"	"MS2"	"0"	"257.1"	"100.000"	"79.5482"	"27303"	"27303"	"27287"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"371.3"	""	"295.1"	""	"305.6"	""	"436.4"	"0.6"	"520.5"	"509.8"	""	"483"	"50"	"33.000"	"26.000"	"0.000245424059328273"	""	"0"	"0.0002905"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIIDPVLDR"	"[K].eIIDPVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"649.87946"	"1298.75163"	"1298.75173"	"-0.08"	"-0.00005"	"5/78"	"5"	"78"	"1581425.61010742"	"HCD"	"MS2"	"0"	"62.7"	"100.000"	"79.8733"	"27428"	"27428"	"27418"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.9"	""	"61.5"	""	"81.7"	""	"107.2"	""	"126.3"	"136.3"	""	"485"	"40"	"33.000"	"26.000"	"0.00243059020233891"	""	"0"	"0.0002561"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIIDPVLDR"	"[K].eIIDPVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"649.87952"	"1298.75176"	"1298.75173"	"0.02"	"0.00001"	"7/78"	"7"	"78"	"2817251.71386719"	"HCD"	"MS2"	"0"	"108.5"	"100.000"	"79.8069"	"27406"	"27406"	"27398"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"157.7"	""	"130.2"	""	"128.8"	""	"187.0"	""	"217.0"	"209.5"	""	"485"	"49"	"33.000"	"26.000"	"0.000273975509308154"	""	"0"	"8.993E-05"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIIDPVLDR"	"[K].eIIDPVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"649.87958"	"1298.75188"	"1298.75173"	"0.11"	"0.00007"	"5/78"	"5"	"78"	"708485.260864258"	"HCD"	"MS2"	"41.18153"	"33.5"	"100.000"	"79.2807"	"27190"	"27190"	"27174"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.4"	""	"40.9"	""	"38.2"	""	"62.6"	""	"62.2"	"69.4"	""	"485"	"40"	"33.000"	"26.000"	"0.00262852276650142"	""	"0"	"0.00185"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIIDPVLDR"	"[K].eIIDPVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.6731"	"0.0000"	"1"	"1"	"1"	"649.87964"	"1298.75200"	"1298.75173"	"0.21"	"0.00013"	"7/78"	"7"	"78"	"7309615.17956543"	"HCD"	"MS2"	"0.3046506"	"258.6"	"100.000"	"79.5850"	"27313"	"27313"	"27300"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"363.2"	""	"301.8"	""	"308.2"	""	"430.3"	"0.7"	"527.4"	"522.8"	""	"485"	"52"	"33.000"	"26.000"	"0.000146457542623772"	""	"0"	"0.0001014"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFGGTDDPAK"	"[K].YFGGTDDPAk.[R]"	"K10(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"650.32471"	"1299.64214"	"1299.64185"	"0.22"	"0.00014"	"8/76"	"8"	"76"	"1567706.35858154"	"HCD"	"MS2"	"30.18147"	"86.6"	"100.000"	"41.5893"	"11916"	"11916"	"11889"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"118.4"	""	"128.5"	""	"139.7"	""	"125.4"	""	"150.8"	"158.2"	""	"403"	"42"	"33.000"	"26.000"	"0.00141343242631624"	"17"	"0.006574"	"0.07401"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPGADK"	"[R].sAVPPGADk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"650.38635"	"1299.76543"	"1299.76727"	"-1.42"	"-0.00092"	"8/78"	"8"	"78"	"1005394.58496094"	"HCD"	"MS2"	"0"	"61.9"	"100.000"	"37.1989"	"10134"	"10134"	"10104"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.0"	""	"82.6"	""	"93.2"	""	"116.8"	""	"104.6"	"99.6"	""	"459"	"28"	"33.000"	"26.000"	"0.0352194597552438"	"16"	"0.001211"	"0.01425"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPGADK"	"[R].sAVPPGADk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"650.38641"	"1299.76555"	"1299.76727"	"-1.32"	"-0.00086"	"7/78"	"7"	"78"	"1028398.41192627"	"HCD"	"MS2"	"43.57103"	"63.1"	"100.000"	"37.3264"	"10180"	"10180"	"10157"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"98.5"	""	"93.1"	""	"105.0"	""	"102.9"	"1.8"	"100.2"	"94.9"	""	"459"	"22"	"33.000"	"26.000"	"0.158410034981336"	"14"	"0.001546"	"0.01876"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPGADK"	"[R].sAVPPGADk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"650.38855"	"1299.76982"	"1299.76727"	"1.96"	"0.00128"	"7/78"	"7"	"78"	"860253.641906738"	"HCD"	"MS2"	"0"	"52.5"	"100.000"	"37.6495"	"10308"	"10308"	"10291"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"85.8"	""	"77.8"	""	"71.0"	""	"93.0"	"2.8"	"87.0"	"78.5"	""	"478"	"18"	"33.000"	"26.000"	"0.377049093458145"	"14"	"0.00436"	"0.04628"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDSDVGEFR"	"[R].fDSDVGEFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"650.82172"	"1300.63616"	"1300.63710"	"-0.72"	"-0.00047"	"12/74"	"12"	"74"	"431563.500671387"	"HCD"	"MS2"	"7.376278"	"28.0"	"100.000"	"70.5729"	"23662"	"23662"	"23637"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.0"	""	"58.3"	""	"90.1"	""	"9.2"	"1.3"	"68.4"	"22.9"	""	"397"	"28"	"32.000"	"25.000"	"0.0334010801122488"	"24"	"0.0002479"	"0.005162"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDSDVGEFR"	"[R].fDSDVGEFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"650.82208"	"1300.63689"	"1300.63710"	"-0.16"	"-0.00010"	"12/74"	"12"	"74"	"446604.529052734"	"HCD"	"MS2"	"0"	"28.3"	"100.000"	"70.4258"	"23616"	"23616"	"23592"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.1"	""	"52.3"	""	"92.0"	""	"14.3"	""	"69.5"	"22.7"	""	"414"	"26"	"33.000"	"26.000"	"0.0473118952298714"	"22"	"0"	"0.001852"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYLNDLDR"	"[K].yYLNDLDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"650.83978"	"1300.67229"	"1300.67348"	"-0.92"	"-0.00060"	"5/68"	"5"	"68"	"716862.943481445"	"HCD"	"MS2"	"31.66363"	"42.6"	"100.000"	"69.4797"	"23217"	"23217"	"23187"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.7"	""	"45.0"	""	"50.3"	""	"78.7"	""	"89.5"	"92.8"	""	"592"	"22"	"34.000"	"27.000"	"0.182092354322121"	"19"	"0.001211"	"0.01441"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYLNDLDR"	"[K].yYLNDLDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"650.83984"	"1300.67241"	"1300.67348"	"-0.82"	"-0.00054"	"9/68"	"9"	"68"	"692305.781982422"	"HCD"	"MS2"	"33.46053"	"41.9"	"100.000"	"69.3260"	"23168"	"23168"	"23145"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.4"	""	"49.3"	""	"45.9"	""	"79.7"	""	"92.1"	"91.6"	""	"592"	"27"	"34.000"	"27.000"	"0.05614249526785"	"23"	"0.0008629"	"0.01112"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYLNDLDR"	"[K].yYLNDLDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"650.84021"	"1300.67314"	"1300.67348"	"-0.26"	"-0.00017"	"11/68"	"11"	"68"	"3067003.15301514"	"HCD"	"MS2"	"11.07819"	"167.7"	"100.000"	"69.7863"	"23341"	"23341"	"23323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"197.9"	""	"183.9"	""	"201.0"	""	"286.3"	""	"365.0"	"361.0"	""	"585"	"41"	"34.000"	"27.000"	"0.00230741584403427"	"26"	"0"	"0.002702"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYLNDLDR"	"[K].yYLNDLDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"650.84033"	"1300.67339"	"1300.67348"	"-0.07"	"-0.00005"	"6/68"	"6"	"68"	"3062680.92651367"	"HCD"	"MS2"	"8.615412"	"158.8"	"100.000"	"69.6416"	"23296"	"23296"	"23278"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"179.9"	""	"181.8"	""	"172.2"	""	"266.0"	""	"374.1"	"337.5"	""	"592"	"39"	"34.000"	"27.000"	"0.00341422164315043"	"25"	"0"	"0.002901"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTYVSSFPR"	"[R].dTYVSSFPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLL0"	"Transcription elongation factor A protein 1 OS=Rattus norvegicus OX=10116 GN=Tcea1 PE=1 SV=1"	"Q4KLL0"	"Transcription elongation factor A protein 1 OS=Rattus norvegicus OX=10116 GN=Tcea1 PE=1 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"650.84155"	"1300.67583"	"1300.67348"	"1.80"	"0.00117"	"7/74"	"7"	"74"	"416757.477478027"	"HCD"	"MS2"	"0"	"30.3"	"100.000"	"58.3190"	"18728"	"18728"	"18703"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.0"	""	"52.0"	""	"51.4"	""	"42.5"	"2.2"	"46.2"	"50.3"	""	"579"	"36"	"34.000"	"27.000"	"0.00766740790126639"	"19"	"0"	"0.0007745"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTSGDYK"	"[K].gDTSGDYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"650.84222"	"1300.67717"	"1300.67852"	"-1.03"	"-0.00067"	"12/64"	"12"	"64"	"2329391.52819824"	"HCD"	"MS2"	"0"	"205.0"	"100.000"	"31.0199"	"7628"	"7628"	"7611"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"270.5"	""	"173.1"	""	"203.8"	""	"398.5"	""	"457.3"	"450.3"	""	"574"	"33"	"34.000"	"27.000"	"0.0134549440675691"	"16"	"0.0002479"	"0.005132"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTSGDYK"	"[K].gDTSGDYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"650.84222"	"1300.67717"	"1300.67852"	"-1.03"	"-0.00067"	"7/64"	"7"	"64"	"3655100.58929443"	"HCD"	"MS2"	"0"	"320.4"	"100.000"	"31.0751"	"7640"	"7640"	"7620"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"412.3"	""	"243.4"	""	"331.9"	""	"652.8"	""	"708.8"	"702.0"	""	"574"	"44"	"34.000"	"27.000"	"0.00111655956613359"	"24"	"0"	"0.00328"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTSGDYK"	"[K].gDTSGDYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"650.84253"	"1300.67778"	"1300.67852"	"-0.56"	"-0.00037"	"7/64"	"7"	"64"	"3432303.2989502"	"HCD"	"MS2"	"0"	"306.3"	"100.000"	"31.3023"	"7742"	"7742"	"7726"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"380.5"	""	"224.8"	""	"320.4"	""	"571.5"	""	"697.1"	"724.3"	""	"568"	"44"	"34.000"	"27.000"	"0.00110234703941344"	"18"	"0"	"0.003386"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTSGDYK"	"[K].gDTSGDYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"650.84290"	"1300.67851"	"1300.67852"	"0.00"	"0.00000"	"7/64"	"7"	"64"	"1944240.10662842"	"HCD"	"MS2"	"0"	"182.9"	"100.000"	"31.3743"	"7762"	"7762"	"7741"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"226.3"	""	"150.6"	""	"196.3"	""	"344.3"	""	"399.8"	"422.4"	""	"574"	"33"	"34.000"	"27.000"	"0.0133623208841089"	"17"	"0"	"0.003615"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPANLEEAR"	"[K].aTPANLEEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"650.85553"	"1300.70378"	"1300.70585"	"-1.59"	"-0.00103"	"9/94"	"9"	"94"	"2240155.1383667"	"HCD"	"MS2"	"17.8055"	"105.0"	"100.000"	"37.5839"	"10286"	"10286"	"10276"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"175.1"	""	"142.6"	""	"112.7"	""	"177.7"	""	"203.7"	"185.1"	""	"620"	"33"	"34.000"	"27.000"	"0.0158621369017496"	""	"0"	"0.003192"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPANLEEAR"	"[K].aTPANLEEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.5161"	"0.0000"	"1"	"1"	"1"	"650.85596"	"1300.70464"	"1300.70585"	"-0.93"	"-0.00060"	"5/94"	"5"	"94"	"657885.224853516"	"HCD"	"MS2"	"20.91338"	"43.3"	"100.000"	"38.3449"	"10587"	"10587"	"10562"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.2"	""	"63.9"	""	"56.3"	""	"75.3"	"1.0"	"75.9"	"70.6"	""	"621"	"31"	"34.000"	"27.000"	"0.0242137249317472"	""	"0.000936"	"0.01225"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPANLEEAR"	"[K].aTPANLEEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"650.85645"	"1300.70561"	"1300.70585"	"-0.18"	"-0.00012"	"12/94"	"12"	"94"	"3659629.13012695"	"HCD"	"MS2"	"0"	"150.0"	"100.000"	"38.0438"	"10464"	"10464"	"10447"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"262.4"	""	"204.7"	""	"149.6"	""	"252.4"	""	"279.5"	"274.0"	""	"627"	"45"	"34.000"	"27.000"	"0.00093161730094987"	""	"0"	"0.001505"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPANLEEAR"	"[K].aTPANLEEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.6053"	"0.0000"	"1"	"1"	"1"	"650.85645"	"1300.70561"	"1300.70585"	"-0.18"	"-0.00012"	"9/94"	"9"	"94"	"3514564.87463379"	"HCD"	"MS2"	"3.611233"	"150.3"	"100.000"	"37.8821"	"10406"	"10406"	"10388"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"271.9"	""	"209.6"	""	"149.4"	""	"263.6"	""	"270.3"	"260.4"	""	"627"	"38"	"34.000"	"27.000"	"0.00511961785664874"	""	"0"	"0.001487"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPANLEEAR"	"[K].aTPANLEEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"650.85706"	"1300.70683"	"1300.70585"	"0.76"	"0.00049"	"7/94"	"7"	"94"	"1725545.99951172"	"HCD"	"MS2"	"43.47509"	"86.4"	"100.000"	"37.7388"	"10343"	"10343"	"10329"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"147.8"	""	"127.6"	""	"99.6"	""	"150.8"	""	"152.9"	"143.6"	""	"632"	"28"	"34.000"	"28.000"	"0.0477185328715871"	"23"	"0.0002479"	"0.005361"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDLLLNNVR"	"[R].dDLLLNNVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"0"	"2"	"2"	"0.5588"	"0.0000"	"1"	"1"	"1"	"650.87421"	"1300.74114"	"1300.74223"	"-0.84"	"-0.00055"	"5/72"	"5"	"72"	"1124441.7053833"	"HCD"	"MS2"	"55.08013"	"45.3"	"100.000"	"72.6080"	"24505"	"24505"	"24481"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"72.4"	""	"56.6"	""	"64.1"	""	"77.9"	"0.2"	"76.6"	"80.9"	""	"631"	"34"	"34.000"	"28.000"	"0.0140604546369412"	""	"0"	"0.001031"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDLLLNNVR"	"[R].dDLLLNNVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"650.87445"	"1300.74162"	"1300.74223"	"-0.47"	"-0.00030"	"6/72"	"6"	"72"	"969366.10345459"	"HCD"	"MS2"	"60.90229"	"36.9"	"100.000"	"72.7293"	"24541"	"24541"	"24515"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.2"	""	"52.3"	""	"53.9"	""	"60.3"	"0.8"	"65.6"	"63.9"	""	"672"	"27"	"35.000"	"28.000"	"0.0747032123258871"	"23"	"0"	"0.001246"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDLLLNNVR"	"[R].dDLLLNNVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"0"	"2"	"2"	"0.6600"	"0.0000"	"1"	"1"	"1"	"650.87445"	"1300.74162"	"1300.74223"	"-0.47"	"-0.00030"	"7/72"	"7"	"72"	"1904271.81256104"	"HCD"	"MS2"	"10.59438"	"85.2"	"100.000"	"72.9008"	"24624"	"24624"	"24609"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"128.6"	""	"116.0"	""	"130.2"	""	"120.3"	"2.6"	"145.1"	"163.8"	""	"672"	"50"	"35.000"	"28.000"	"0.000313573445067789"	""	"0"	"0.000413"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDLLLNNVR"	"[R].dDLLLNNVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"0"	"2"	"2"	"0.6458"	"0.0000"	"1"	"1"	"1"	"650.87512"	"1300.74297"	"1300.74223"	"0.57"	"0.00037"	"7/72"	"7"	"72"	"1569719.46270752"	"HCD"	"MS2"	"12.38572"	"73.3"	"100.000"	"73.0570"	"24674"	"24674"	"24654"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.3"	""	"97.4"	""	"114.1"	""	"112.8"	""	"127.4"	"138.3"	""	"681"	"48"	"35.000"	"28.000"	"0.000547163496650885"	""	"0"	"0.0004011"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IILNELAQR"	"[K].iILnELAqR.[G]"	"N-Term(TMT6plex); N4(Deamidated); Q8(Deamidated)"	"1"	"1"	"P09875"	"UDP-glucuronosyltransferase 2B1 OS=Rattus norvegicus OX=10116 GN=Ugt2b1 PE=2 SV=1"	"P09875"	"UDP-glucuronosyltransferase 2B1 OS=Rattus norvegicus OX=10116 GN=Ugt2b1 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0435"	"2"	"2"	"2"	"650.88678"	"1300.76628"	"1300.76738"	"-0.85"	"-0.00055"	"5/74"	"5"	"74"	"245980.132751465"	"HCD"	"MS2"	"31.09441"	"12.1"	"100.000"	"98.3631"	"34462"	"34462"	"34459"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.1"	""	"13.6"	""	"13.0"	""	"22.5"	""	"25.7"	"29.0"	""	"710"	"22"	"35.000"	"28.000"	"0.207600479871291"	"22"	"0.006739"	"0.07647"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEILEVLR"	"[K].eAEILEVLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3B7D0"	"Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpox PE=1 SV=1"	"Q3B7D0"	"Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpox PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"650.88696"	"1300.76665"	"1300.76738"	"-0.56"	"-0.00037"	"5/74"	"5"	"74"	"165508.704833984"	"HCD"	"MS2"	"15.2675"	"9.5"	"100.000"	"100.0562"	"34988"	"34988"	"34979"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.3"	""	"10.7"	""	"11.8"	""	"16.4"	""	"17.2"	"22.9"	""	"716"	"22"	"35.000"	"28.000"	"0.207435473320823"	"24"	"0.005254"	"0.0592"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEILEVLR"	"[K].eAEILEVLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3B7D0"	"Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpox PE=1 SV=1"	"Q3B7D0"	"Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpox PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"650.88715"	"1300.76702"	"1300.76738"	"-0.28"	"-0.00018"	"5/74"	"5"	"74"	"127796.757568359"	"HCD"	"MS2"	"12.58623"	"6.9"	"100.000"	"99.9824"	"35005"	"35005"	"34999"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.3"	""	"12.4"	""	"11.5"	""	"9.7"	""	"12.6"	"10.5"	""	"716"	"27"	"35.000"	"28.000"	"0.0699653525167591"	""	"0.002973"	"0.0289"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IILNELAQR"	"[K].iILnELAqR.[G]"	"N-Term(TMT6plex); N4(Deamidated); Q8(Deamidated)"	"1"	"1"	"P09875"	"UDP-glucuronosyltransferase 2B1 OS=Rattus norvegicus OX=10116 GN=Ugt2b1 PE=2 SV=1"	"P09875"	"UDP-glucuronosyltransferase 2B1 OS=Rattus norvegicus OX=10116 GN=Ugt2b1 PE=2 SV=1"	"0"	"2"	"2"	"0.0435"	"0.0000"	"1"	"1"	"3"	"650.88721"	"1300.76714"	"1300.76738"	"-0.19"	"-0.00012"	"5/74"	"5"	"74"	"265298.119506836"	"HCD"	"MS2"	"26.17906"	"13.0"	"100.000"	"98.3445"	"34488"	"34488"	"34482"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.1"	""	"13.0"	""	"18.6"	""	"24.5"	""	"24.8"	"28.3"	""	"716"	"23"	"35.000"	"28.000"	"0.191815203389776"	"21"	"0.007627"	"0.09333"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYLNDLDR"	"[K].yYLnDLDR.[V]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"651.33270"	"1301.65813"	"1301.65750"	"0.48"	"0.00032"	"5/68"	"5"	"68"	"202354.307678223"	"HCD"	"MS2"	"0"	"14.5"	"100.000"	"75.5250"	"25671"	"25671"	"25643"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.0"	""	"16.9"	""	"16.3"	""	"24.9"	""	"31.7"	"31.4"	""	"524"	"14"	"34.000"	"27.000"	"0.94907665585175"	"22"	"0.009081"	"0.117"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYLNDLDR"	"[K].yYLnDLDR.[V]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"1"	"651.33368"	"1301.66008"	"1301.65750"	"1.98"	"0.00129"	"9/68"	"9"	"68"	"239205.217895508"	"HCD"	"MS2"	"20.83996"	"16.5"	"100.000"	"75.4155"	"25637"	"25637"	"25614"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.7"	""	"17.0"	""	"18.8"	""	"30.4"	""	"37.9"	"35.8"	""	"510"	"23"	"34.000"	"27.000"	"0.122050673542273"	""	"0.004942"	"0.05433"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIENELLDR"	"[R].aIENELLDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"651.36578"	"1301.72429"	"1301.72625"	"-1.50"	"-0.00098"	"8/84"	"8"	"84"	"885606.686706543"	"HCD"	"MS2"	"40.30351"	"56.9"	"100.000"	"69.9621"	"23427"	"23427"	"23406"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.0"	""	"65.4"	""	"64.3"	""	"102.0"	""	"112.1"	"109.6"	""	"759"	"38"	"35.000"	"28.000"	"0.00616895752807308"	""	"0"	"0.0002905"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIENELLDR"	"[R].aIENELLDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"0"	"2"	"2"	"0.4872"	"0.0000"	"1"	"1"	"1"	"651.36609"	"1301.72490"	"1301.72625"	"-1.03"	"-0.00067"	"8/84"	"8"	"84"	"950213.213989258"	"HCD"	"MS2"	"51.15927"	"57.5"	"100.000"	"70.1021"	"23470"	"23470"	"23445"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"101.0"	""	"67.7"	""	"50.3"	""	"100.7"	"2.1"	"114.4"	"109.5"	""	"759"	"39"	"35.000"	"28.000"	"0.00496834539778275"	""	"0"	"0.0004668"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIENELLDR"	"[R].aIENELLDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"651.36639"	"1301.72551"	"1301.72625"	"-0.56"	"-0.00037"	"6/84"	"6"	"84"	"462650.907409668"	"HCD"	"MS2"	"10.81189"	"31.7"	"100.000"	"70.4090"	"23595"	"23595"	"23573"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.5"	""	"40.9"	""	"55.3"	""	"44.2"	"0.8"	"60.5"	"49.8"	""	"783"	"26"	"35.000"	"28.000"	"0.0952207869552398"	""	"0.001211"	"0.01528"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTQEPESIR"	"[R].lTQEPESIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"651.36670"	"1301.72612"	"1301.72625"	"-0.10"	"-0.00006"	"7/86"	"7"	"86"	"2851999.37927246"	"HCD"	"MS2"	"2.257549"	"134.1"	"100.000"	"45.4365"	"13467"	"13467"	"13451"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"150.4"	""	"136.0"	""	"144.1"	""	"274.3"	""	"266.9"	"304.1"	""	"775"	"45"	"35.000"	"28.000"	"0.00136543712528964"	"24"	"0"	"0.0008274"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTQEPESIR"	"[R].lTQEPESIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"651.36676"	"1301.72624"	"1301.72625"	"0.00"	"0.00000"	"6/86"	"6"	"86"	"919250.878295898"	"HCD"	"MS2"	"19.13534"	"64.8"	"100.000"	"45.4798"	"13496"	"13496"	"13477"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.5"	""	"63.4"	""	"74.9"	""	"117.5"	"0.5"	"134.9"	"146.0"	""	"775"	"27"	"35.000"	"28.000"	"0.0706759584648859"	"21"	"0.00447"	"0.04773"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELHDAMK"	"[K].eLHDAMk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"0.4545"	"0.0000"	"1"	"1"	"1"	"434.58051"	"1301.72696"	"1301.72878"	"-1.39"	"-0.00061"	"10/54"	"10"	"54"	"7536270.38787842"	"HCD"	"MS2"	"35.79066"	"306.5"	"100.000"	"34.6076"	"9081"	"9081"	"9059"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"471.2"	"3.7"	"445.3"	""	"475.1"	""	"405.0"	""	"521.5"	"580.7"	""	"802"	"33"	"36.000"	"29.000"	"0.0207560339612178"	""	"0.0006732"	"0.009178"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTQEPESIR"	"[R].lTQEPESIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"651.36713"	"1301.72698"	"1301.72625"	"0.56"	"0.00037"	"7/86"	"7"	"86"	"2316960.37207031"	"HCD"	"MS2"	"0"	"111.2"	"100.000"	"45.1807"	"13374"	"13374"	"13351"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"136.2"	""	"115.6"	""	"120.8"	""	"214.5"	""	"234.2"	"236.1"	""	"802"	"43"	"36.000"	"29.000"	"0.00215846182789032"	"23"	"0"	"0.0009915"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELHDAMK"	"[K].eLHDAMk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"0.4706"	"0.0000"	"1"	"1"	"1"	"434.58102"	"1301.72852"	"1301.72878"	"-0.20"	"-0.00009"	"6/54"	"6"	"54"	"7560910.80554199"	"HCD"	"MS2"	"20.05489"	"306.6"	"100.000"	"34.7056"	"9115"	"9115"	"9092"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"475.5"	""	"409.3"	""	"472.4"	""	"412.1"	""	"507.5"	"628.4"	""	"792"	"34"	"35.000"	"28.000"	"0.0160212053112187"	""	"0.0006732"	"0.008623"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLETEHK"	"[K].sLETEHk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"3"	"3"	"0.8537"	"0.0000"	"1"	"1"	"1"	"434.58646"	"1301.74482"	"1301.74654"	"-1.32"	"-0.00057"	"6/56"	"6"	"56"	"4828366.97485352"	"HCD"	"MS2"	"16.11802"	"226.4"	"100.000"	"26.9045"	"5962"	"5962"	"5942"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"269.1"	""	"223.8"	""	"246.6"	""	"429.2"	""	"485.2"	"500.5"	""	"775"	"41"	"35.000"	"28.000"	"0.00331338351242815"	"21"	"0.001546"	"0.01859"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLETEHK"	"[K].sLETEHk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"434.58652"	"1301.74500"	"1301.74654"	"-1.18"	"-0.00051"	"9/56"	"9"	"56"	"4934273.85870361"	"HCD"	"MS2"	"19.86866"	"247.0"	"100.000"	"26.9645"	"5970"	"5970"	"5952"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"293.9"	""	"229.1"	""	"247.7"	""	"492.2"	""	"539.5"	"550.7"	""	"775"	"30"	"35.000"	"28.000"	"0.0353404200250415"	"19"	"0.002547"	"0.0251"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVQPEGPYR"	"[K].qVQPEGPYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"651.85352"	"1302.69975"	"1302.70037"	"-0.47"	"-0.00031"	"8/80"	"8"	"80"	"4128575.71270752"	"HCD"	"MS2"	"4.803063"	"174.0"	"100.000"	"34.2615"	"8940"	"8940"	"8919"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"317.0"	""	"192.4"	""	"247.9"	""	"274.7"	""	"273.6"	"344.1"	""	"786"	"23"	"35.000"	"28.000"	"0.191598696610631"	"18"	"0.001134"	"0.01389"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVQPEGPYR"	"[K].qVQPEGPYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"651.85364"	"1302.70000"	"1302.70037"	"-0.28"	"-0.00018"	"5/80"	"5"	"80"	"1672699.15539551"	"HCD"	"MS2"	"0"	"87.1"	"100.000"	"34.6159"	"9078"	"9078"	"9060"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"145.3"	""	"88.1"	""	"133.8"	""	"144.2"	""	"135.5"	"177.2"	""	"773"	"24"	"35.000"	"28.000"	"0.153514533869939"	"20"	"0.001374"	"0.01675"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVQPEGPYR"	"[K].qVQPEGPYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"651.85394"	"1302.70061"	"1302.70037"	"0.19"	"0.00012"	"5/80"	"5"	"80"	"3322715.89373779"	"HCD"	"MS2"	"0"	"143.1"	"100.000"	"34.3120"	"8954"	"8954"	"8935"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"252.5"	""	"166.5"	""	"193.1"	""	"238.2"	""	"231.2"	"273.2"	""	"793"	"22"	"35.000"	"28.000"	"0.225550187079583"	"17"	"0.000936"	"0.01206"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLQQLAEER"	"[R].sLQQLAEER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6600"	"0.0000"	"1"	"1"	"1"	"651.86188"	"1302.71648"	"1302.72150"	"-3.85"	"-0.00251"	"7/90"	"7"	"90"	"2295750.65771484"	"HCD"	"MS2"	"17.59666"	"116.6"	"100.000"	"56.9784"	"18167"	"18167"	"18147"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"143.1"	""	"115.7"	""	"117.8"	""	"200.7"	""	"251.3"	"282.1"	""	"827"	"50"	"36.000"	"29.000"	"0.000380605897919936"	""	"0"	"0.0007756"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLQQLAEER"	"[R].sLQQLAEER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"651.86200"	"1302.71672"	"1302.72150"	"-3.66"	"-0.00239"	"7/90"	"7"	"90"	"2824057.80102539"	"HCD"	"MS2"	"18.64923"	"130.8"	"100.000"	"56.8287"	"18120"	"18120"	"18099"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"171.6"	""	"130.5"	""	"133.9"	""	"208.4"	""	"291.4"	"311.0"	""	"826"	"60"	"36.000"	"29.000"	"4.34460253888991E-05"	""	"0"	"0.0005425"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLQQLAEER"	"[R].sLQQLAEER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"651.86407"	"1302.72087"	"1302.72150"	"-0.48"	"-0.00031"	"7/90"	"7"	"90"	"2543093.86358643"	"HCD"	"MS2"	"1.995784"	"113.6"	"100.000"	"57.2638"	"18284"	"18284"	"18267"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"129.2"	""	"116.6"	""	"119.1"	""	"173.8"	""	"243.7"	"299.2"	""	"907"	"60"	"36.000"	"29.000"	"4.14550355006759E-05"	""	"0"	"0.0003138"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAEILQESR"	"[K].qAEILQESR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"651.86426"	"1302.72124"	"1302.72150"	"-0.20"	"-0.00013"	"7/90"	"7"	"90"	"660635.926086426"	"HCD"	"MS2"	"0"	"48.4"	"100.000"	"40.6435"	"11533"	"11533"	"11506"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.9"	""	"48.9"	""	"61.0"	""	"85.3"	"1.2"	"83.7"	"107.0"	""	"904"	"43"	"36.000"	"29.000"	"0.00216839518783784"	""	"0"	"0.002172"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLQQLAEER"	"[R].sLQQLAEER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"651.86450"	"1302.72173"	"1302.72150"	"0.18"	"0.00012"	"7/90"	"7"	"90"	"2246150.61975098"	"HCD"	"MS2"	"3.095205"	"104.5"	"100.000"	"57.1167"	"18238"	"18238"	"18224"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"138.2"	""	"110.4"	""	"99.4"	""	"159.6"	"0.4"	"215.6"	"270.4"	""	"898"	"56"	"36.000"	"29.000"	"0.000101682529410928"	""	"0"	"0.0003467"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAQDNPK"	"[K].aTAQDNPk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"651.87286"	"1302.73845"	"1302.74179"	"-2.56"	"-0.00167"	"7/70"	"7"	"70"	"729648.014282227"	"HCD"	"MS2"	"0"	"57.0"	"100.000"	"24.8549"	"5132"	"5132"	"5113"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.0"	""	"66.1"	""	"80.6"	""	"94.0"	"0.9"	"99.3"	"107.9"	""	"894"	"45"	"36.000"	"29.000"	"0.00129511258370249"	"25"	"0.0008629"	"0.01032"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAQDNPK"	"[K].aTAQDNPk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"651.87439"	"1302.74150"	"1302.74179"	"-0.22"	"-0.00014"	"6/70"	"6"	"70"	"420218.010192871"	"HCD"	"MS2"	"0"	"38.9"	"100.000"	"24.9104"	"5139"	"5139"	"5116"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.2"	""	"55.0"	""	"47.1"	""	"54.5"	"0.2"	"74.1"	"82.4"	""	"896"	"28"	"36.000"	"29.000"	"0.0693869845272791"	"25"	"0.006769"	"0.07752"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87671"	"1302.74614"	"1302.74665"	"-0.39"	"-0.00025"	"7/76"	"7"	"76"	"822212.779052734"	"HCD"	"MS2"	"3.515779"	"31.8"	"100.000"	"101.8205"	"35569"	"35569"	"35560"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.2"	""	"35.8"	""	"45.0"	""	"51.1"	""	"60.9"	"62.6"	""	"913"	"64"	"36.000"	"29.000"	"1.78418868929231E-05"	""	"0"	"0.0003067"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87671"	"1302.74614"	"1302.74665"	"-0.39"	"-0.00025"	"7/74"	"7"	"74"	"822212.779052734"	"HCD"	"MS2"	"3.515779"	"31.8"	"100.000"	"101.8205"	"35569"	"35569"	"35560"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.2"	""	"35.8"	""	"45.0"	""	"51.1"	""	"60.9"	"62.6"	""	"913"	"64"	"36.000"	"29.000"	"1.78418868929231E-05"	""	"0"	"0.0003067"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87683"	"1302.74639"	"1302.74665"	"-0.20"	"-0.00013"	"7/76"	"7"	"76"	"857046.331970215"	"HCD"	"MS2"	"0"	"33.0"	"100.000"	"98.1197"	"34382"	"34382"	"34380"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.0"	""	"41.2"	""	"42.0"	""	"50.9"	"0.3"	"67.8"	"64.6"	""	"913"	"64"	"36.000"	"29.000"	"1.74759495324129E-05"	""	"0"	"0.0002259"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87683"	"1302.74639"	"1302.74665"	"-0.20"	"-0.00013"	"7/74"	"7"	"74"	"857046.331970215"	"HCD"	"MS2"	"0"	"33.0"	"100.000"	"98.1197"	"34382"	"34382"	"34380"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.0"	""	"41.2"	""	"42.0"	""	"50.9"	"0.3"	"67.8"	"64.6"	""	"913"	"64"	"36.000"	"29.000"	"1.74759495324129E-05"	""	"0"	"0.0002259"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87689"	"1302.74651"	"1302.74665"	"-0.11"	"-0.00007"	"7/76"	"7"	"76"	"912550.026367188"	"HCD"	"MS2"	"0"	"36.4"	"100.000"	"98.0860"	"34403"	"34403"	"34399"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.3"	""	"50.0"	""	"48.4"	""	"61.5"	""	"69.0"	"68.3"	""	"912"	"64"	"36.000"	"29.000"	"1.74970503944479E-05"	""	"0"	"0.0006113"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87689"	"1302.74651"	"1302.74665"	"-0.11"	"-0.00007"	"7/74"	"7"	"74"	"912550.026367188"	"HCD"	"MS2"	"0"	"36.4"	"100.000"	"98.0860"	"34403"	"34403"	"34399"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.3"	""	"50.0"	""	"48.4"	""	"61.5"	""	"69.0"	"68.3"	""	"912"	"64"	"36.000"	"29.000"	"1.74970503944479E-05"	""	"0"	"0.0006114"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87689"	"1302.74651"	"1302.74665"	"-0.11"	"-0.00007"	"7/76"	"7"	"76"	"1121958.64862061"	"HCD"	"MS2"	"2.228473"	"42.4"	"100.000"	"101.7556"	"35595"	"35595"	"35590"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.8"	""	"58.9"	""	"58.2"	""	"69.9"	""	"70.9"	"82.5"	""	"912"	"64"	"36.000"	"29.000"	"1.8237480589106E-05"	""	"0"	"0.0001093"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87689"	"1302.74651"	"1302.74665"	"-0.11"	"-0.00007"	"7/74"	"7"	"74"	"1121958.64862061"	"HCD"	"MS2"	"2.228473"	"42.4"	"100.000"	"101.7556"	"35595"	"35595"	"35590"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.8"	""	"58.9"	""	"58.2"	""	"69.9"	""	"70.9"	"82.5"	""	"912"	"64"	"36.000"	"29.000"	"1.8237480589106E-05"	""	"0"	"0.0001093"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87695"	"1302.74663"	"1302.74665"	"-0.01"	"-0.00001"	"7/76"	"7"	"76"	"7879023.90081787"	"HCD"	"MS2"	"0"	"280.9"	"100.000"	"97.8602"	"34293"	"34293"	"34290"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"380.3"	""	"364.4"	""	"403.5"	""	"430.9"	""	"543.1"	"548.0"	""	"910"	"64"	"36.000"	"29.000"	"1.70612716021695E-05"	""	"0"	"0.0003564"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87695"	"1302.74663"	"1302.74665"	"-0.01"	"-0.00001"	"7/74"	"7"	"74"	"7879023.90081787"	"HCD"	"MS2"	"0"	"280.9"	"100.000"	"97.8602"	"34293"	"34293"	"34290"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"380.3"	""	"364.4"	""	"403.5"	""	"430.9"	""	"543.1"	"548.0"	""	"910"	"64"	"36.000"	"29.000"	"1.70612716021695E-05"	""	"0"	"0.0003564"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87714"	"1302.74700"	"1302.74665"	"0.27"	"0.00017"	"7/76"	"7"	"76"	"407081.707580566"	"HCD"	"MS2"	"47.74252"	"18.5"	"100.000"	"97.3126"	"34133"	"34133"	"34129"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.9"	""	"21.6"	""	"26.8"	""	"28.9"	""	"36.4"	"31.7"	""	"908"	"41"	"36.000"	"29.000"	"0.00340451971036935"	""	"0"	"0.002621"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87714"	"1302.74700"	"1302.74665"	"0.27"	"0.00017"	"7/74"	"7"	"74"	"407081.707580566"	"HCD"	"MS2"	"47.74252"	"18.5"	"100.000"	"97.3126"	"34133"	"34133"	"34129"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.9"	""	"21.6"	""	"26.8"	""	"28.9"	""	"36.4"	"31.7"	""	"908"	"41"	"36.000"	"29.000"	"0.00340451971036935"	""	"0"	"0.002621"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87726"	"1302.74724"	"1302.74665"	"0.45"	"0.00030"	"7/76"	"7"	"76"	"392302.961181641"	"HCD"	"MS2"	"51.40816"	"17.6"	"100.000"	"97.3501"	"34123"	"34123"	"34118"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.0"	""	"27.7"	""	"24.9"	""	"29.7"	""	"21.5"	"29.4"	""	"949"	"46"	"36.000"	"29.000"	"0.00117824665846275"	"28"	"0"	"0.001293"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87726"	"1302.74724"	"1302.74665"	"0.45"	"0.00030"	"7/74"	"7"	"74"	"392302.961181641"	"HCD"	"MS2"	"51.40816"	"17.6"	"100.000"	"97.3501"	"34123"	"34123"	"34118"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.0"	""	"27.7"	""	"24.9"	""	"29.7"	""	"21.5"	"29.4"	""	"949"	"46"	"36.000"	"29.000"	"0.00117824665846275"	"28"	"0"	"0.001293"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87732"	"1302.74736"	"1302.74665"	"0.55"	"0.00036"	"7/76"	"7"	"76"	"8009181.42877197"	"HCD"	"MS2"	"0"	"291.1"	"100.000"	"97.6068"	"34209"	"34209"	"34204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"402.5"	""	"387.9"	""	"406.7"	""	"458.2"	"1.6"	"543.2"	"559.2"	""	"949"	"69"	"36.000"	"29.000"	"6.44519730405604E-06"	""	"0"	"9.844E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87732"	"1302.74736"	"1302.74665"	"0.55"	"0.00036"	"7/74"	"7"	"74"	"8009181.42877197"	"HCD"	"MS2"	"0"	"291.1"	"100.000"	"97.6068"	"34209"	"34209"	"34204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"402.5"	""	"387.9"	""	"406.7"	""	"458.2"	"1.6"	"543.2"	"559.2"	""	"949"	"69"	"36.000"	"29.000"	"6.44519730405604E-06"	""	"0"	"9.843E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87744"	"1302.74761"	"1302.74665"	"0.74"	"0.00048"	"7/76"	"7"	"76"	"7818777.894104"	"HCD"	"MS2"	"0"	"267.7"	"100.000"	"97.8336"	"34312"	"34312"	"34306"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"359.4"	""	"367.1"	""	"378.9"	""	"410.4"	"1.4"	"513.6"	"507.4"	""	"859"	"69"	"36.000"	"29.000"	"5.76717550808712E-06"	""	"0"	"0.0002571"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87744"	"1302.74761"	"1302.74665"	"0.74"	"0.00048"	"7/74"	"7"	"74"	"7818777.894104"	"HCD"	"MS2"	"0"	"267.7"	"100.000"	"97.8336"	"34312"	"34312"	"34306"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"359.4"	""	"367.1"	""	"378.9"	""	"410.4"	"1.4"	"513.6"	"507.4"	""	"859"	"69"	"36.000"	"29.000"	"5.76717550808712E-06"	""	"0"	"0.0002571"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87750"	"1302.74773"	"1302.74665"	"0.83"	"0.00054"	"5/76"	"5"	"76"	"123532.247558594"	"HCD"	"MS2"	"10.70818"	"5.6"	"100.000"	"102.0210"	"35682"	"35682"	"35673"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.5"	""	"7.9"	""	"8.4"	""	"7.8"	""	"10.1"	"10.4"	""	"859"	"33"	"36.000"	"29.000"	"0.0228540497355088"	""	"0.0008629"	"0.009838"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87750"	"1302.74773"	"1302.74665"	"0.83"	"0.00054"	"5/74"	"5"	"74"	"123532.247558594"	"HCD"	"MS2"	"10.70818"	"5.6"	"100.000"	"102.0210"	"35682"	"35682"	"35673"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.5"	""	"7.9"	""	"8.4"	""	"7.8"	""	"10.1"	"10.4"	""	"859"	"33"	"36.000"	"29.000"	"0.0228540497355088"	""	"0.0008629"	"0.009838"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87750"	"1302.74773"	"1302.74665"	"0.83"	"0.00054"	"5/76"	"5"	"76"	"2584059.92803955"	"HCD"	"MS2"	"0"	"82.6"	"100.000"	"101.5530"	"35480"	"35480"	"35474"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"123.3"	""	"117.2"	""	"117.9"	""	"132.4"	""	"140.6"	"156.1"	""	"859"	"33"	"36.000"	"29.000"	"0.0218254480579761"	""	"0"	"0.0006715"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87750"	"1302.74773"	"1302.74665"	"0.83"	"0.00054"	"5/74"	"5"	"74"	"2584059.92803955"	"HCD"	"MS2"	"0"	"82.6"	"100.000"	"101.5530"	"35480"	"35480"	"35474"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"123.3"	""	"117.2"	""	"117.9"	""	"132.4"	""	"140.6"	"156.1"	""	"859"	"33"	"36.000"	"29.000"	"0.0218254480579761"	""	"0"	"0.0006715"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87775"	"1302.74822"	"1302.74665"	"1.20"	"0.00078"	"5/76"	"5"	"76"	"3025314.1315918"	"HCD"	"MS2"	"0"	"95.0"	"100.000"	"101.4958"	"35508"	"35508"	"35501"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"140.9"	""	"130.5"	""	"145.5"	""	"154.2"	""	"159.4"	"169.7"	""	"860"	"33"	"36.000"	"29.000"	"0.0207715284877102"	""	"0"	"0.001516"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87775"	"1302.74822"	"1302.74665"	"1.20"	"0.00078"	"5/74"	"5"	"74"	"3025314.1315918"	"HCD"	"MS2"	"0"	"95.0"	"100.000"	"101.4958"	"35508"	"35508"	"35501"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"140.9"	""	"130.5"	""	"145.5"	""	"154.2"	""	"159.4"	"169.7"	""	"860"	"33"	"36.000"	"29.000"	"0.0207715284877102"	""	"0"	"0.001516"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87775"	"1302.74822"	"1302.74665"	"1.20"	"0.00078"	"7/76"	"7"	"76"	"13623264.2268066"	"HCD"	"MS2"	"0"	"498.9"	"100.000"	"97.5776"	"34220"	"34220"	"34212"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"692.5"	""	"678.6"	""	"713.2"	""	"800.3"	""	"897.2"	"951.4"	""	"860"	"64"	"36.000"	"29.000"	"1.62356042097929E-05"	""	"0"	"0.0004385"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87775"	"1302.74822"	"1302.74665"	"1.20"	"0.00078"	"7/74"	"7"	"74"	"13623264.2268066"	"HCD"	"MS2"	"0"	"498.9"	"100.000"	"97.5776"	"34220"	"34220"	"34212"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"692.5"	""	"678.6"	""	"713.2"	""	"800.3"	""	"897.2"	"951.4"	""	"860"	"64"	"36.000"	"29.000"	"1.62356042097929E-05"	""	"0"	"0.0004385"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87823"	"1302.74919"	"1302.74665"	"1.95"	"0.00127"	"7/76"	"7"	"76"	"1690429.14160156"	"HCD"	"MS2"	"0"	"47.7"	"100.000"	"101.4457"	"35444"	"35444"	"35440"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.9"	""	"66.8"	""	"66.8"	""	"82.0"	""	"78.4"	"84.5"	""	"855"	"27"	"36.000"	"29.000"	"0.0907687007505094"	""	"0"	"0.002193"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87823"	"1302.74919"	"1302.74665"	"1.95"	"0.00127"	"7/74"	"7"	"74"	"1690429.14160156"	"HCD"	"MS2"	"0"	"47.7"	"100.000"	"101.4457"	"35444"	"35444"	"35440"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.9"	""	"66.8"	""	"66.8"	""	"82.0"	""	"78.4"	"84.5"	""	"855"	"27"	"36.000"	"29.000"	"0.0907687007505094"	""	"0"	"0.002192"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTLDGTLIR"	"[K].gAGTLDGTLIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8197"	"0.0000"	"1"	"1"	"1"	"651.88184"	"1302.75640"	"1302.75788"	"-1.14"	"-0.00074"	"9/88"	"9"	"88"	"1773661.3704834"	"HCD"	"MS2"	"0"	"88.4"	"100.000"	"62.1846"	"20266"	"20266"	"20255"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"112.5"	""	"130.9"	""	"122.3"	""	"140.3"	"0.5"	"142.6"	"188.3"	""	"850"	"61"	"36.000"	"29.000"	"3.27633974352383E-05"	"27"	"0"	"8.216E-06"	"0.921"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTLDGTLIR"	"[K].gAGTLDGTLIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8197"	"0.0000"	"1"	"1"	"1"	"651.88190"	"1302.75652"	"1302.75788"	"-1.05"	"-0.00068"	"9/88"	"9"	"88"	"6702159.93817139"	"HCD"	"MS2"	"0"	"281.4"	"100.000"	"61.9051"	"20155"	"20155"	"20146"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"355.4"	""	"387.8"	""	"429.1"	""	"448.6"	""	"475.8"	"569.8"	""	"850"	"61"	"36.000"	"29.000"	"3.14332241899751E-05"	"27"	"0"	"1.238E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTLDGTLIR"	"[K].gAGTLDGTLIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8254"	"0.0000"	"1"	"1"	"1"	"651.88202"	"1302.75676"	"1302.75788"	"-0.86"	"-0.00056"	"9/88"	"9"	"88"	"3211168.49768066"	"HCD"	"MS2"	"0"	"157.9"	"100.000"	"61.9257"	"20149"	"20149"	"20141"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"193.1"	""	"221.9"	""	"230.5"	""	"260.0"	""	"255.5"	"335.8"	""	"848"	"63"	"36.000"	"29.000"	"2.07666219412221E-05"	"27"	"0"	"1.124E-05"	"0.892"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTLDGTLIR"	"[K].gAGTLDGTLIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8525"	"0.0000"	"1"	"1"	"1"	"651.88226"	"1302.75725"	"1302.75788"	"-0.48"	"-0.00032"	"9/88"	"9"	"88"	"4510643.58239746"	"HCD"	"MS2"	"0"	"206.9"	"100.000"	"62.1939"	"20255"	"20255"	"20248"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"254.1"	""	"277.7"	""	"309.9"	""	"324.3"	"1.1"	"367.6"	"426.6"	""	"906"	"61"	"36.000"	"29.000"	"3.42056779132442E-05"	"25"	"0"	"1.396E-05"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGEDPLVK"	"[R].sGEDPLVk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61954"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11 OS=Rattus norvegicus OX=10116 GN=Gng11 PE=3 SV=1"	"P61954"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11 OS=Rattus norvegicus OX=10116 GN=Gng11 PE=3 SV=1"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"651.88739"	"1302.76750"	"1302.76694"	"0.43"	"0.00028"	"7/62"	"7"	"62"	"995684.383666992"	"HCD"	"MS2"	"12.52921"	"73.8"	"100.000"	"50.2005"	"15420"	"15420"	"15394"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"80.5"	""	"85.5"	""	"96.3"	""	"142.8"	""	"148.3"	"153.2"	""	"804"	"37"	"36.000"	"29.000"	"0.00800250682272849"	"28"	"0.0003538"	"0.006811"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGEDPLVK"	"[R].sGEDPLVk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61954"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11 OS=Rattus norvegicus OX=10116 GN=Gng11 PE=3 SV=1"	"P61954"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11 OS=Rattus norvegicus OX=10116 GN=Gng11 PE=3 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"651.88751"	"1302.76775"	"1302.76694"	"0.62"	"0.00040"	"7/62"	"7"	"62"	"2321406.54901123"	"HCD"	"MS2"	"14.75236"	"147.2"	"100.000"	"50.6065"	"15574"	"15574"	"15550"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"154.4"	""	"185.4"	""	"172.5"	""	"297.4"	""	"301.2"	"290.1"	""	"793"	"19"	"35.000"	"28.000"	"0.537332601997186"	"22"	"0.004069"	"0.04415"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEVNQVK"	"[K].gAEVNQVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.7551"	"0.0000"	"1"	"1"	"1"	"651.89233"	"1302.77739"	"1302.77817"	"-0.60"	"-0.00039"	"14/62"	"14"	"62"	"1481044.28967285"	"HCD"	"MS2"	"24.70469"	"127.3"	"100.000"	"34.8102"	"9162"	"9162"	"9144"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"188.5"	""	"186.6"	""	"171.6"	""	"169.2"	""	"244.4"	"246.5"	""	"760"	"49"	"35.000"	"28.000"	"0.000491794419750994"	"27"	"0"	"0.003521"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEVNQVK"	"[K].gAEVNQVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"651.89282"	"1302.77837"	"1302.77817"	"0.15"	"0.00010"	"14/62"	"14"	"62"	"1001204.80871582"	"HCD"	"MS2"	"5.071868"	"84.3"	"100.000"	"34.9655"	"9220"	"9220"	"9199"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"107.9"	""	"108.4"	""	"116.4"	""	"111.9"	""	"177.3"	"178.8"	""	"754"	"51"	"35.000"	"28.000"	"0.000269986065650264"	""	"0"	"0.002458"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALWEDEGVR"	"[K].aLWEDEGVR.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.7292"	"0.0000"	"1"	"1"	"1"	"652.34521"	"1303.68315"	"1303.68438"	"-0.94"	"-0.00061"	"7/68"	"7"	"68"	"3829154.11804199"	"HCD"	"MS2"	"0"	"174.6"	"100.000"	"65.8449"	"21750"	"21750"	"21733"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"206.4"	""	"220.9"	""	"202.4"	""	"289.5"	""	"340.5"	"402.6"	""	"735"	"48"	"35.000"	"28.000"	"0.000575781018264746"	""	"0"	"0.0006906"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALWEDEGVR"	"[K].aLWEDEGVR.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"652.34534"	"1303.68340"	"1303.68438"	"-0.75"	"-0.00049"	"6/68"	"6"	"68"	"366257.146911621"	"HCD"	"MS2"	"27.66852"	"23.2"	"100.000"	"66.2636"	"21905"	"21905"	"21880"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.2"	""	"29.7"	""	"25.7"	""	"37.4"	""	"51.0"	"43.8"	""	"735"	"26"	"35.000"	"28.000"	"0.100521125691772"	"21"	"0.0004639"	"0.008044"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALWEDEGVR"	"[K].aLWEDEGVR.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.7292"	"0.0000"	"1"	"1"	"1"	"652.34552"	"1303.68376"	"1303.68438"	"-0.47"	"-0.00031"	"7/68"	"7"	"68"	"1051725.50769043"	"HCD"	"MS2"	"7.993019"	"58.5"	"100.000"	"65.6413"	"21651"	"21651"	"21629"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"79.2"	""	"79.7"	""	"65.2"	""	"90.5"	""	"124.6"	"116.4"	""	"744"	"48"	"35.000"	"28.000"	"0.000621645708523582"	""	"0"	"0.0003469"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALWEDEGVR"	"[K].aLWEDEGVR.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"652.34558"	"1303.68389"	"1303.68438"	"-0.38"	"-0.00025"	"11/68"	"11"	"68"	"385522.54510498"	"HCD"	"MS2"	"18.61763"	"23.7"	"100.000"	"66.1697"	"21882"	"21882"	"21860"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.0"	""	"26.7"	""	"32.4"	""	"38.1"	""	"47.5"	"48.9"	""	"744"	"25"	"35.000"	"28.000"	"0.118725208209748"	"19"	"0"	"0.002256"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALWEDEGVR"	"[K].aLWEDEGVR.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.7292"	"0.0000"	"1"	"1"	"1"	"652.34576"	"1303.68425"	"1303.68438"	"-0.10"	"-0.00006"	"7/68"	"7"	"68"	"1047827.08459473"	"HCD"	"MS2"	"10.51927"	"58.4"	"100.000"	"65.5497"	"21629"	"21629"	"21609"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.9"	""	"75.6"	""	"69.3"	""	"90.8"	""	"109.8"	"127.3"	""	"737"	"48"	"35.000"	"28.000"	"0.00060734784127715"	""	"0"	"0.0001823"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALWEDEGVR"	"[K].aLWEDEGVR.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"652.34601"	"1303.68474"	"1303.68438"	"0.28"	"0.00018"	"7/68"	"7"	"68"	"3665701.25268555"	"HCD"	"MS2"	"0"	"175.9"	"100.000"	"65.9318"	"21770"	"21770"	"21753"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"219.4"	""	"209.5"	""	"204.5"	""	"290.4"	""	"354.6"	"397.2"	""	"754"	"48"	"35.000"	"28.000"	"0.000581221070761984"	""	"0"	"0.0005863"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQELSAEER"	"[K].lQELSAEER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"652.35547"	"1303.70366"	"1303.70551"	"-1.42"	"-0.00092"	"7/88"	"7"	"88"	"1360304.97827148"	"HCD"	"MS2"	"11.34763"	"75.7"	"100.000"	"52.7029"	"16428"	"16428"	"16407"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.5"	""	"97.7"	""	"89.5"	""	"125.4"	"3.4"	"146.5"	"128.8"	""	"861"	"40"	"36.000"	"29.000"	"0.00404550885198077"	"29"	"0"	"0.0007526"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQELSAEER"	"[K].lQELSAEER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"652.35571"	"1303.70415"	"1303.70551"	"-1.04"	"-0.00068"	"6/88"	"6"	"88"	"1358948.6340332"	"HCD"	"MS2"	"12.46389"	"72.6"	"100.000"	"52.4051"	"16318"	"16318"	"16299"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.5"	""	"86.0"	""	"93.1"	""	"123.5"	"1.2"	"129.5"	"141.3"	""	"861"	"43"	"36.000"	"29.000"	"0.00233869267707493"	"28"	"0"	"0.0007139"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITITNDQNR"	"[K].iTITNDQNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"652.36163"	"1303.71599"	"1303.71674"	"-0.58"	"-0.00038"	"7/80"	"7"	"80"	"3513010.82226563"	"HCD"	"MS2"	"3.77664"	"168.9"	"100.000"	"39.3657"	"11011"	"11011"	"10991"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"310.5"	""	"169.3"	""	"197.8"	""	"302.7"	""	"293.1"	"326.5"	""	"992"	"45"	"36.000"	"29.000"	"0.00171585931401757"	"25"	"0"	"0.00115"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITITNDQNR"	"[K].iTITNDQNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"652.36169"	"1303.71611"	"1303.71674"	"-0.48"	"-0.00032"	"7/80"	"7"	"80"	"2418566.87036133"	"HCD"	"MS2"	"31.89236"	"131.4"	"100.000"	"39.4789"	"11048"	"11048"	"11025"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"242.4"	""	"147.7"	""	"163.9"	""	"231.0"	""	"218.3"	"243.3"	""	"990"	"44"	"36.000"	"29.000"	"0.00184758828108882"	"25"	"0"	"0.0004871"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSLGETAQR"	"[K].vNSLGETAQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"652.36176"	"1303.71623"	"1303.71674"	"-0.39"	"-0.00025"	"8/96"	"8"	"96"	"3388776.04193115"	"HCD"	"MS2"	"22.63455"	"168.5"	"100.000"	"35.1814"	"9308"	"9308"	"9285"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"253.2"	""	"217.7"	""	"199.0"	""	"245.5"	""	"311.8"	"371.4"	""	"990"	"48"	"36.000"	"29.000"	"0.000766664226361678"	"26"	"0"	"5.787E-05"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSLGETAQR"	"[K].vNSLGETAQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"652.36182"	"1303.71636"	"1303.71674"	"-0.30"	"-0.00019"	"8/96"	"8"	"96"	"1564364.65808105"	"HCD"	"MS2"	"5.393043"	"82.7"	"100.000"	"35.3500"	"9382"	"9382"	"9364"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"121.5"	""	"99.9"	""	"104.2"	""	"104.3"	"0.2"	"160.6"	"194.2"	""	"989"	"46"	"36.000"	"29.000"	"0.00110959961131058"	"22"	"0"	"0.0005465"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSLGETAQR"	"[K].vNSLGETAQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"652.36188"	"1303.71648"	"1303.71674"	"-0.20"	"-0.00013"	"7/96"	"7"	"96"	"680759.615356445"	"HCD"	"MS2"	"3.657835"	"45.4"	"100.000"	"35.5286"	"9450"	"9450"	"9426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"64.6"	""	"51.8"	""	"57.8"	""	"70.1"	""	"87.0"	"103.5"	""	"989"	"39"	"36.000"	"29.000"	"0.00590427117657583"	"23"	"0"	"0.0004961"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITITNDQNR"	"[K].iTITNDQNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"652.36188"	"1303.71648"	"1303.71674"	"-0.20"	"-0.00013"	"7/80"	"7"	"80"	"1478950.40338135"	"HCD"	"MS2"	"11.88346"	"102.0"	"100.000"	"39.7865"	"11174"	"11174"	"11149"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"149.3"	""	"114.2"	""	"111.7"	""	"199.9"	""	"156.5"	"237.6"	""	"989"	"21"	"36.000"	"29.000"	"0.355767519622829"	"22"	"0"	"0.002982"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSLGETAQR"	"[K].vNSLGETAQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"652.36188"	"1303.71648"	"1303.71674"	"-0.20"	"-0.00013"	"8/96"	"8"	"96"	"2907927.58355713"	"HCD"	"MS2"	"19.90661"	"140.7"	"100.000"	"35.0581"	"9263"	"9263"	"9242"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"189.2"	""	"174.3"	""	"177.8"	""	"182.6"	""	"278.8"	"336.5"	""	"989"	"44"	"36.000"	"29.000"	"0.00178306138974202"	"26"	"0"	"0.0001198"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEQQNSSR"	"[R].iLEQQNSSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.6591"	"0.0000"	"1"	"1"	"1"	"652.36188"	"1303.71648"	"1303.71674"	"-0.20"	"-0.00013"	"7/84"	"7"	"84"	"2805083.49707031"	"HCD"	"MS2"	"27.57177"	"146.4"	"100.000"	"32.9381"	"8407"	"8407"	"8379"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"235.4"	""	"162.3"	""	"173.2"	""	"240.8"	""	"284.9"	"292.0"	""	"989"	"44"	"36.000"	"29.000"	"0.00176265085479278"	""	"0"	"0.0008785"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEQQNSSR"	"[R].iLEQQNSSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.5952"	"0.0000"	"1"	"1"	"1"	"652.36224"	"1303.71721"	"1303.71674"	"0.36"	"0.00023"	"7/84"	"7"	"84"	"2313233.15106201"	"HCD"	"MS2"	"24.18476"	"133.1"	"100.000"	"32.9337"	"8399"	"8399"	"8372"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"212.8"	""	"144.5"	""	"154.3"	""	"234.4"	""	"258.9"	"258.6"	""	"995"	"42"	"36.000"	"29.000"	"0.00348171393011132"	""	"0"	"0.0006063"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TENPAEGK"	"[K].tENPAEGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"652.36597"	"1303.72466"	"1303.72580"	"-0.88"	"-0.00057"	"12/76"	"12"	"76"	"1380312.5378418"	"HCD"	"MS2"	"21.10347"	"96.8"	"100.000"	"29.7487"	"7103"	"7103"	"7079"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"85.0"	""	"59.0"	""	"66.5"	""	"212.0"	""	"264.2"	"238.1"	""	"926"	"34"	"36.000"	"29.000"	"0.0172020811071991"	"19"	"0.0002479"	"0.005573"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TENPAEGK"	"[K].tENPAEGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"652.36621"	"1303.72515"	"1303.72580"	"-0.50"	"-0.00033"	"6/76"	"6"	"76"	"1520958.25384521"	"HCD"	"MS2"	"13.88043"	"108.5"	"100.000"	"29.7643"	"7121"	"7121"	"7100"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"97.0"	""	"73.6"	""	"67.0"	""	"232.2"	""	"287.3"	"281.0"	""	"917"	"31"	"36.000"	"29.000"	"0.0327596565505623"	"20"	"0.0002479"	"0.005768"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNLELESTR"	"[K].lNLELESTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQJ5"	"Rho GTPase-activating protein 29 OS=Rattus norvegicus OX=10116 GN=Arhgap29 PE=1 SV=2"	"Q5PQJ5"	"Rho GTPase-activating protein 29 OS=Rattus norvegicus OX=10116 GN=Arhgap29 PE=1 SV=2"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"652.37555"	"1303.74382"	"1303.74190"	"1.48"	"0.00096"	"6/86"	"6"	"86"	"200894.729980469"	"HCD"	"MS2"	"0"	"16.7"	"100.000"	"71.7935"	"24160"	"24160"	"24136"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.2"	""	"19.9"	""	"25.3"	""	"27.9"	""	"31.9"	"32.4"	""	"856"	"18"	"36.000"	"29.000"	"0.738658617771808"	"27"	"0.0023"	"0.0239"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVGEGIDGK"	"[K].aVGEGIDGk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZAP3"	"Microtubule-associated protein 10 OS=Rattus norvegicus OX=10116 GN=Map10 PE=3 SV=1"	"D3ZAP3"	"Microtubule-associated protein 10 OS=Rattus norvegicus OX=10116 GN=Map10 PE=3 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"652.38397"	"1303.76067"	"1303.76219"	"-1.17"	"-0.00076"	"9/70"	"9"	"70"	"791354.664855957"	"HCD"	"MS2"	"14.51156"	"56.9"	"100.000"	"47.9674"	"14498"	"14498"	"14474"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.7"	""	"45.9"	""	"62.6"	""	"125.8"	""	"134.2"	"122.5"	""	"788"	"19"	"35.000"	"28.000"	"0.50291689067167"	"21"	"0.004069"	"0.04413"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EIGGDVQK"	"[K].eIGGDVQk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"6"	"652.38422"	"1303.76116"	"1303.76219"	"-0.79"	"-0.00052"	"7/66"	"7"	"66"	"3636030.0355835"	"HCD"	"MS2"	"41.73907"	"210.2"	"100.000"	"44.3886"	"13052"	"13052"	"13032"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"366.4"	""	"297.5"	""	"291.2"	""	"274.3"	""	"391.8"	"370.8"	""	"789"	"13"	"35.000"	"28.000"	"2.02790220549267"	"20"	"0.003189"	"0.03207"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEAEQLK"	"[RK].qEAEQLk.[NK]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; P52287"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Gnb3 PE=1 SV=1"	"0"	"2"	"2"	"0.2105"	"0.0000"	"1"	"1"	"1"	"652.38458"	"1303.76189"	"1303.76219"	"-0.23"	"-0.00015"	"12/64"	"12"	"64"	"5652871.60778809"	"HCD"	"MS2"	"0"	"408.9"	"100.000"	"36.7691"	"9958"	"9958"	"9939"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"353.7"	""	"314.5"	""	"312.7"	""	"847.6"	""	"1069.5"	"1011.3"	""	"805"	"38"	"36.000"	"29.000"	"0.00569856996432725"	""	"0.004606"	"0.04959"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGGDVQK"	"[K].eIGGDVQk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.4722"	"0.0000"	"1"	"1"	"1"	"652.38458"	"1303.76189"	"1303.76219"	"-0.23"	"-0.00015"	"12/66"	"12"	"66"	"8715468.86535645"	"HCD"	"MS2"	"0"	"638.5"	"100.000"	"44.0848"	"12932"	"12932"	"12913"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1164.1"	""	"785.8"	""	"823.5"	""	"1024.7"	"10.2"	"1160.3"	"1074.0"	""	"805"	"36"	"36.000"	"29.000"	"0.0104175569834912"	""	"0.0006732"	"0.008933"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAQEAVK"	"[K].eAAQEAVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"652.38464"	"1303.76201"	"1303.76219"	"-0.14"	"-0.00009"	"7/72"	"7"	"72"	"1396955.19683838"	"HCD"	"MS2"	"25.11923"	"107.4"	"100.000"	"32.8533"	"8366"	"8366"	"8347"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"163.7"	""	"118.8"	""	"125.0"	""	"192.5"	""	"214.9"	"203.4"	""	"805"	"30"	"36.000"	"29.000"	"0.0415686465818963"	""	"0.0002479"	"0.005803"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGGDVQK"	"[K].eIGGDVQk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"652.38470"	"1303.76213"	"1303.76219"	"-0.04"	"-0.00003"	"12/66"	"12"	"66"	"8207962.20837402"	"HCD"	"MS2"	"1.85749"	"589.2"	"100.000"	"44.2117"	"12973"	"12973"	"12955"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1082.9"	""	"720.7"	""	"740.1"	""	"946.8"	""	"1073.5"	"1015.6"	""	"805"	"38"	"36.000"	"29.000"	"0.00699464833571624"	""	"0.0004639"	"0.007608"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAQEAVK"	"[K].eAAQEAVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"652.38477"	"1303.76225"	"1303.76219"	"0.05"	"0.00003"	"7/72"	"7"	"72"	"3287932.41241455"	"HCD"	"MS2"	"0"	"233.0"	"100.000"	"32.5266"	"8240"	"8240"	"8211"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"348.7"	""	"243.6"	""	"222.8"	""	"454.9"	""	"472.5"	"475.1"	""	"805"	"45"	"36.000"	"29.000"	"0.00114753485267032"	""	"0"	"0.002463"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEAEQLK"	"[RK].qEAEQLk.[NK]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; P52287"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Gnb3 PE=1 SV=1"	"0"	"2"	"2"	"0.2308"	"0.0000"	"1"	"1"	"1"	"652.38477"	"1303.76225"	"1303.76219"	"0.05"	"0.00003"	"12/64"	"12"	"64"	"5525800.9085083"	"HCD"	"MS2"	"0"	"417.5"	"100.000"	"36.9702"	"10035"	"10035"	"10018"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"379.6"	""	"299.1"	""	"296.3"	""	"878.8"	""	"1089.3"	"1045.3"	""	"805"	"39"	"36.000"	"29.000"	"0.00562038265325015"	""	"0.00379"	"0.03914"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEAEQLK"	"[RK].qEAEQLk.[NK]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; P52287"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Gnb3 PE=1 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"652.38483"	"1303.76238"	"1303.76219"	"0.15"	"0.00009"	"12/64"	"12"	"64"	"693467.470275879"	"HCD"	"MS2"	"0"	"61.4"	"100.000"	"37.0841"	"10087"	"10087"	"10059"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.0"	""	"49.7"	""	"58.7"	""	"124.4"	""	"161.2"	"136.6"	""	"803"	"35"	"36.000"	"29.000"	"0.0113942448991929"	""	"0.002547"	"0.02533"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVGEGIDGK"	"[K].aVGEGIDGk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZAP3"	"Microtubule-associated protein 10 OS=Rattus norvegicus OX=10116 GN=Map10 PE=3 SV=1"	"D3ZAP3"	"Microtubule-associated protein 10 OS=Rattus norvegicus OX=10116 GN=Map10 PE=3 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"652.38489"	"1303.76250"	"1303.76219"	"0.24"	"0.00016"	"10/70"	"10"	"70"	"744221.469238281"	"HCD"	"MS2"	"10.88372"	"53.6"	"100.000"	"47.7127"	"14406"	"14406"	"14381"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.0"	""	"49.0"	""	"60.8"	""	"104.8"	""	"124.6"	"111.0"	""	"803"	"26"	"36.000"	"29.000"	"0.105120047779992"	"22"	"0.007602"	"0.08988"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAQEAVK"	"[K].eAAQEAVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"652.38489"	"1303.76250"	"1303.76219"	"0.24"	"0.00016"	"6/72"	"6"	"72"	"2362646.74084473"	"HCD"	"MS2"	"0"	"180.3"	"100.000"	"32.5408"	"8239"	"8239"	"8211"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"258.5"	""	"213.9"	""	"184.4"	""	"331.7"	""	"389.9"	"336.6"	""	"803"	"27"	"36.000"	"29.000"	"0.0799255345603355"	"26"	"0.0004639"	"0.007644"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAQEAVK"	"[K].eAAQEAVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"2"	"2"	"0.2800"	"0.0000"	"1"	"1"	"1"	"652.38513"	"1303.76299"	"1303.76219"	"0.61"	"0.00040"	"7/72"	"7"	"72"	"1531422.25030518"	"HCD"	"MS2"	"26.59917"	"105.8"	"100.000"	"32.8507"	"8371"	"8371"	"8350"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"153.7"	""	"124.2"	""	"125.0"	""	"192.5"	""	"199.7"	"210.7"	""	"777"	"25"	"35.000"	"28.000"	"0.112302913429899"	""	"0.0006732"	"0.008444"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEAEQLK"	"[RK].qEAEQLk.[NK]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; P52287"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Gnb3 PE=1 SV=1"	"0"	"2"	"2"	"0.2121"	"0.0000"	"1"	"1"	"1"	"652.38556"	"1303.76384"	"1303.76219"	"1.27"	"0.00083"	"6/64"	"6"	"64"	"598734.239196777"	"HCD"	"MS2"	"12.04687"	"53.2"	"100.000"	"37.2942"	"10167"	"10167"	"10141"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.2"	""	"41.6"	""	"41.2"	""	"123.4"	""	"123.2"	"129.4"	""	"793"	"33"	"35.000"	"28.000"	"0.0179573890431786"	""	"0.002467"	"0.02493"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEVEVLK"	"[R].eEVEVLk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"Q3B8N7"	"TSC22 domain family protein 4 OS=Rattus norvegicus OX=10116 GN=Tsc22d4 PE=1 SV=1"	"Q9EQZ1; Q3B8N7; P62501"	"TSC22 domain family protein 3 OS=Rattus norvegicus OX=10116 GN=Tsc22d3 PE=1 SV=1; TSC22 domain family protein 4 OS=Rattus norvegicus OX=10116 GN=Tsc22d4 PE=1 SV=1; TSC22 domain family protein 1 OS=Rattus norvegicus OX=10116 GN=Tsc22d1 PE=2 SV=1"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"652.39661"	"1303.78594"	"1303.78734"	"-1.08"	"-0.00070"	"6/54"	"6"	"54"	"1065630.02557373"	"HCD"	"MS2"	"0"	"80.5"	"100.000"	"60.5251"	"19594"	"19594"	"19577"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.6"	""	"101.9"	""	"99.9"	""	"135.8"	""	"171.7"	"154.5"	""	"752"	"27"	"35.000"	"28.000"	"0.0758905752744267"	"28"	"0.003967"	"0.04156"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEVEVLK"	"[R].eEVEVLk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"Q3B8N7"	"TSC22 domain family protein 4 OS=Rattus norvegicus OX=10116 GN=Tsc22d4 PE=1 SV=1"	"Q9EQZ1; Q3B8N7; P62501"	"TSC22 domain family protein 3 OS=Rattus norvegicus OX=10116 GN=Tsc22d3 PE=1 SV=1; TSC22 domain family protein 4 OS=Rattus norvegicus OX=10116 GN=Tsc22d4 PE=1 SV=1; TSC22 domain family protein 1 OS=Rattus norvegicus OX=10116 GN=Tsc22d1 PE=2 SV=1"	"0"	"2"	"2"	"0.3824"	"0.0000"	"1"	"1"	"1"	"652.39819"	"1303.78911"	"1303.78734"	"1.36"	"0.00089"	"12/54"	"12"	"54"	"924315.737060547"	"HCD"	"MS2"	"0"	"75.4"	"100.000"	"60.6975"	"19649"	"19649"	"19630"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"107.0"	""	"103.7"	""	"89.6"	""	"125.4"	""	"149.7"	"145.2"	""	"703"	"34"	"35.000"	"28.000"	"0.0129099728625077"	""	"0.002937"	"0.02723"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNLAGAEELFAR"	"[R].NNLAGAEELFAR.[K]"	""	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"652.83319"	"1304.65911"	"1304.65934"	"-0.18"	"-0.00012"	"9/112"	"9"	"112"	"355738.245422363"	"HCD"	"MS2"	"11.7291"	"17.1"	"100.000"	"72.7648"	"24569"	"24569"	"24545"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.6"	""	"23.8"	""	"26.3"	""	"28.7"	""	"33.8"	"26.7"	"NoQuanLabels"	"532"	"48"	"34.000"	"27.000"	"0.000453817915474831"	"25"	"0"	"0.0007833"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNLAGAEELFAR"	"[R].NNLAGAEELFAR.[K]"	""	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"652.83344"	"1304.65959"	"1304.65934"	"0.19"	"0.00013"	"8/112"	"8"	"112"	"327159.580078125"	"HCD"	"MS2"	"0"	"12.7"	"100.000"	"72.8400"	"24586"	"24586"	"24562"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.2"	""	"14.9"	""	"18.3"	""	"17.2"	""	"25.5"	"24.2"	"NoQuanLabels"	"533"	"56"	"34.000"	"27.000"	"6.86589588341186E-05"	"24"	"0"	"0.0003073"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNYPQSVPR"	"[K].dNYPQSVPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"652.84180"	"1304.67632"	"1304.67963"	"-2.54"	"-0.00166"	"7/88"	"7"	"88"	"2430670.02648926"	"HCD"	"MS2"	"0"	"124.4"	"100.000"	"36.1304"	"9699"	"9699"	"9677"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"189.9"	""	"158.2"	""	"154.1"	""	"178.7"	"0.6"	"243.7"	"254.4"	""	"729"	"45"	"35.000"	"28.000"	"0.0011713792663344"	"20"	"0"	"0.001429"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNYPQSVPR"	"[K].dNYPQSVPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"652.84253"	"1304.67778"	"1304.67963"	"-1.42"	"-0.00092"	"7/88"	"7"	"88"	"2198532.74694824"	"HCD"	"MS2"	"0"	"112.9"	"100.000"	"36.3245"	"9771"	"9771"	"9754"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"173.7"	""	"140.8"	""	"136.6"	""	"178.1"	"1.0"	"212.9"	"227.5"	""	"712"	"43"	"35.000"	"28.000"	"0.00165367437979299"	"20"	"0"	"0.000958"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGESESNLR"	"[K].lAGESESNLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"652.85352"	"1304.69975"	"1304.70076"	"-0.77"	"-0.00050"	"8/82"	"8"	"82"	"3918429.79858398"	"HCD"	"MS2"	"7.722466"	"182.9"	"100.000"	"38.4062"	"10620"	"10620"	"10599"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"296.8"	""	"242.0"	""	"264.9"	""	"273.5"	""	"321.3"	"334.0"	""	"816"	"48"	"36.000"	"29.000"	"0.000718886226935945"	"21"	"0"	"0.0001556"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGESESNLR"	"[K].lAGESESNLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"652.85382"	"1304.70036"	"1304.70076"	"-0.30"	"-0.00020"	"8/82"	"8"	"82"	"2476133.3125"	"HCD"	"MS2"	"0"	"131.4"	"100.000"	"38.6983"	"10739"	"10739"	"10720"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"209.0"	""	"158.1"	""	"166.0"	""	"222.6"	"0.1"	"247.8"	"241.6"	""	"870"	"47"	"36.000"	"29.000"	"0.000971603916931282"	"22"	"0"	"0.0001453"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGESESNLR"	"[K].lAGESESNLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"652.85388"	"1304.70049"	"1304.70076"	"-0.21"	"-0.00014"	"8/82"	"8"	"82"	"2873451.95983887"	"HCD"	"MS2"	"2.564593"	"146.1"	"100.000"	"38.8877"	"10807"	"10807"	"10789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"212.7"	""	"187.1"	""	"201.4"	""	"238.6"	""	"271.5"	"275.0"	""	"869"	"48"	"36.000"	"29.000"	"0.000626599120237556"	"22"	"0"	"0.0001172"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGESESNLR"	"[K].lAGESESNLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"652.85431"	"1304.70134"	"1304.70076"	"0.45"	"0.00029"	"8/82"	"8"	"82"	"2290989.46075439"	"HCD"	"MS2"	"8.958026"	"124.9"	"100.000"	"38.5748"	"10680"	"10680"	"10661"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"188.5"	""	"152.1"	""	"166.4"	""	"205.0"	"1.7"	"231.7"	"238.0"	""	"873"	"47"	"36.000"	"29.000"	"0.000918299288958066"	"22"	"0"	"0.0001414"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEALMLDR"	"[K].dLEALMLDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"652.85791"	"1304.70854"	"1304.70815"	"0.30"	"0.00020"	"6/78"	"6"	"78"	"100724.87286377"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"100.5858"	"35209"	"35209"	"35200"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.5"	""	"9.2"	""	"10.8"	""	"8.7"	""	"10.9"	"14.7"	""	"847"	"46"	"36.000"	"29.000"	"0.00106378390374431"	""	"0"	"0.002427"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEALMLDR"	"[K].dLEALMLDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"652.85809"	"1304.70891"	"1304.70815"	"0.58"	"0.00038"	"5/78"	"5"	"78"	"101062.793273926"	"HCD"	"MS2"	"13.57453"	"6.0"	"100.000"	"100.9525"	"35285"	"35285"	"35280"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.8"	""	"7.6"	""	"6.7"	""	"5.4"	""	"13.8"	"11.7"	""	"849"	"26"	"36.000"	"29.000"	"0.107864291350568"	"17"	"0.005921"	"0.06849"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEALMLDR"	"[K].dLEALMLDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"652.85834"	"1304.70940"	"1304.70815"	"0.95"	"0.00062"	"5/78"	"5"	"78"	"140477.16394043"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"100.8552"	"35299"	"35299"	"35293"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.2"	""	"12.9"	""	"11.3"	""	"15.2"	""	"14.6"	"14.1"	""	"837"	"34"	"36.000"	"29.000"	"0.0158378221704104"	"21"	"0.004022"	"0.04296"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTSGTTPAAIR"	"[K].tTSGTTPAAIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"652.87128"	"1304.73528"	"1304.73715"	"-1.43"	"-0.00093"	"8/90"	"8"	"90"	"1437253.65625"	"HCD"	"MS2"	"0"	"80.3"	"100.000"	"30.7743"	"7519"	"7519"	"7505"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"132.3"	""	"89.3"	""	"106.4"	""	"141.0"	""	"146.1"	"144.9"	""	"895"	"38"	"36.000"	"29.000"	"0.00752996642329034"	"19"	"0"	"0.0008636"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSSGVSEIR"	"[R].qLSSGVSEIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5778"	"0.0000"	"1"	"1"	"1"	"652.87134"	"1304.73540"	"1304.73715"	"-1.34"	"-0.00087"	"6/100"	"6"	"100"	"1600547.72937012"	"HCD"	"MS2"	"22.51066"	"81.1"	"100.000"	"45.7168"	"13593"	"13593"	"13566"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"109.2"	""	"99.1"	""	"90.6"	""	"131.2"	""	"170.1"	"171.3"	""	"905"	"45"	"36.000"	"29.000"	"0.00145418139373474"	""	"0"	"0.0004175"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTSGTTPAAIR"	"[K].tTSGTTPAAIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"652.87140"	"1304.73552"	"1304.73715"	"-1.24"	"-0.00081"	"8/90"	"8"	"90"	"1568517.00427246"	"HCD"	"MS2"	"0"	"85.1"	"100.000"	"30.7350"	"7515"	"7515"	"7503"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"131.5"	""	"104.7"	""	"112.2"	""	"143.8"	""	"150.8"	"169.1"	""	"905"	"44"	"36.000"	"29.000"	"0.00173228196350862"	"17"	"0"	"0.001533"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSSGVSEIR"	"[R].qLSSGVSEIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"652.87158"	"1304.73589"	"1304.73715"	"-0.96"	"-0.00063"	"6/100"	"6"	"100"	"942943.125366211"	"HCD"	"MS2"	"0"	"58.4"	"100.000"	"46.3887"	"13867"	"13867"	"13849"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"80.0"	""	"78.6"	""	"62.2"	""	"99.0"	"0.2"	"120.0"	"114.8"	""	"891"	"42"	"36.000"	"29.000"	"0.00263540708025174"	""	"0"	"0.0002705"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTSGTTPAAIR"	"[K].tTSGTTPAAIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"652.87201"	"1304.73674"	"1304.73715"	"-0.31"	"-0.00020"	"7/90"	"7"	"90"	"11134994.1817017"	"HCD"	"MS2"	"0"	"411.3"	"100.000"	"30.4437"	"7397"	"7397"	"7379"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"627.0"	""	"497.1"	""	"587.5"	""	"722.9"	""	"719.1"	"743.5"	""	"921"	"46"	"36.000"	"29.000"	"0.00115140903906121"	"23"	"0"	"3.907E-05"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSSGVSEIR"	"[R].qLSSGVSEIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"652.87219"	"1304.73711"	"1304.73715"	"-0.03"	"-0.00002"	"7/100"	"7"	"100"	"748697.661987305"	"HCD"	"MS2"	"12.3901"	"48.9"	"100.000"	"45.8227"	"13624"	"13624"	"13597"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.6"	""	"61.2"	""	"54.3"	""	"88.7"	""	"100.7"	"100.5"	""	"919"	"51"	"36.000"	"29.000"	"0.000364154361355777"	""	"0"	"0.0001557"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTSGTTPAAIR"	"[K].tTSGTTPAAIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"652.87219"	"1304.73711"	"1304.73715"	"-0.03"	"-0.00002"	"8/90"	"8"	"90"	"11740051.0203247"	"HCD"	"MS2"	"0"	"448.5"	"100.000"	"30.4922"	"7405"	"7405"	"7386"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"645.1"	""	"576.3"	""	"624.4"	""	"788.2"	""	"779.2"	"838.6"	""	"919"	"47"	"36.000"	"29.000"	"0.000908417549631401"	"21"	"0"	"1.809E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSSGVSEIR"	"[R].qLSSGVSEIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5091"	"0.0000"	"1"	"1"	"1"	"652.87225"	"1304.73723"	"1304.73715"	"0.07"	"0.00004"	"8/100"	"8"	"100"	"20162097.6258545"	"HCD"	"MS2"	"0.3154601"	"374.8"	"49.628"	"46.0324"	"13722"	"13722"	"13705"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"460.7"	""	"497.2"	""	"452.7"	""	"634.7"	""	"780.0"	"737.9"	""	"919"	"55"	"36.000"	"29.000"	"0.000131306285468079"	""	"0"	"0.0001127"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSSGVSEIR"	"[R].qLSSGVSEIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"652.87256"	"1304.73784"	"1304.73715"	"0.53"	"0.00035"	"8/100"	"8"	"100"	"22754379.09729"	"HCD"	"MS2"	"0.6554331"	"669.8"	"79.133"	"46.1105"	"13742"	"13742"	"13725"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"828.4"	""	"853.2"	""	"801.7"	""	"1142.0"	"0.8"	"1374.0"	"1358.9"	""	"931"	"54"	"36.000"	"29.000"	"0.000198572766002141"	""	"0"	"0.0001207"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSSGVSEIR"	"[R].qLSSGVSEIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"652.87299"	"1304.73870"	"1304.73715"	"1.19"	"0.00077"	"7/100"	"7"	"100"	"2408063.09838867"	"HCD"	"MS2"	"0"	"138.4"	"100.000"	"46.4257"	"13870"	"13870"	"13852"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"171.7"	""	"161.4"	""	"149.8"	""	"252.0"	""	"287.4"	"296.0"	""	"897"	"40"	"36.000"	"29.000"	"0.00457891358442895"	""	"0"	"0.0002422"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQQEAAAK"	"[R].tQQEAAAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"652.88153"	"1304.75578"	"1304.75744"	"-1.27"	"-0.00083"	"7/74"	"7"	"74"	"385737.685974121"	"HCD"	"MS2"	"0"	"34.4"	"100.000"	"24.1495"	"4835"	"4835"	"4805"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.5"	""	"29.7"	""	"37.7"	""	"60.8"	""	"79.2"	"79.0"	""	"856"	"36"	"36.000"	"29.000"	"0.00994131348840842"	"25"	"0.0002479"	"0.005096"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQQEAAAK"	"[R].tQQEAAAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"652.88196"	"1304.75664"	"1304.75744"	"-0.61"	"-0.00040"	"12/74"	"12"	"74"	"1290475.42144775"	"HCD"	"MS2"	"0"	"103.9"	"100.000"	"23.9642"	"4782"	"4782"	"4755"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"121.6"	""	"95.2"	""	"97.3"	""	"196.3"	""	"246.5"	"241.2"	""	"953"	"38"	"36.000"	"29.000"	"0.00814822297640522"	"25"	"0.0001301"	"0.003964"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNTEGLQK"	"[K].gNTEGLQk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"652.88214"	"1304.75701"	"1304.75744"	"-0.33"	"-0.00022"	"11/70"	"11"	"70"	"2860839.63104248"	"HCD"	"MS2"	"9.408921"	"225.6"	"100.000"	"34.7011"	"9113"	"9113"	"9092"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"347.0"	""	"205.5"	""	"272.0"	""	"436.8"	""	"374.7"	"507.4"	""	"918"	"32"	"36.000"	"29.000"	"0.0284978886711599"	"26"	"0.0006732"	"0.008664"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNTEGLQK"	"[K].gNTEGLQk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"652.88245"	"1304.75762"	"1304.75744"	"0.14"	"0.00009"	"7/70"	"7"	"70"	"3426956.06829834"	"HCD"	"MS2"	"18.72253"	"264.9"	"100.000"	"34.5663"	"9064"	"9064"	"9047"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"405.7"	""	"238.6"	""	"333.4"	""	"532.3"	""	"449.7"	"554.7"	""	"919"	"31"	"36.000"	"29.000"	"0.0385731863805663"	"26"	"0.0006732"	"0.00901"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEQSIK"	"[R].eLEQSIk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"0"	"2"	"2"	"0.2051"	"0.0000"	"1"	"1"	"1"	"652.89478"	"1304.78227"	"1304.78259"	"-0.24"	"-0.00016"	"12/62"	"12"	"62"	"1982868.60809326"	"HCD"	"MS2"	"1.555579"	"156.1"	"100.000"	"51.4160"	"15914"	"15914"	"15893"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"217.8"	""	"181.3"	""	"183.5"	""	"277.3"	"0.9"	"334.7"	"286.3"	""	"805"	"39"	"36.000"	"29.000"	"0.00487265748754069"	""	"0.002711"	"0.02607"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEQSIK"	"[R].eLEQSIk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"0"	"2"	"2"	"0.2162"	"0.0000"	"1"	"1"	"1"	"652.89478"	"1304.78227"	"1304.78259"	"-0.24"	"-0.00016"	"12/62"	"12"	"62"	"1988071.07025146"	"HCD"	"MS2"	"5.034923"	"155.7"	"100.000"	"51.7301"	"16031"	"16031"	"16011"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"225.6"	""	"193.4"	""	"191.2"	""	"273.5"	"2.6"	"306.2"	"283.8"	""	"805"	"37"	"36.000"	"29.000"	"0.00844823303158469"	""	"0.002937"	"0.02747"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEETVAK"	"[K].gLEETVAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"652.89478"	"1304.78227"	"1304.78259"	"-0.24"	"-0.00016"	"7/60"	"7"	"60"	"2717815.38238525"	"HCD"	"MS2"	"23.18027"	"197.1"	"100.000"	"51.0289"	"15756"	"15756"	"15739"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"281.8"	""	"256.8"	""	"268.4"	""	"315.8"	""	"380.7"	"369.3"	""	"805"	"48"	"36.000"	"29.000"	"0.00065428337418957"	"29"	"0"	"0.00271"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETNELLK"	"[K].eTNELLk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"G3V7P1"	"Syntaxin-12 OS=Rattus norvegicus OX=10116 GN=Stx12 PE=1 SV=1"	"G3V7P1"	"Syntaxin-12 OS=Rattus norvegicus OX=10116 GN=Stx12 PE=1 SV=1"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"652.89490"	"1304.78252"	"1304.78259"	"-0.05"	"-0.00003"	"12/62"	"12"	"62"	"1216464.87225342"	"HCD"	"MS2"	"15.23742"	"102.7"	"100.000"	"54.1779"	"17031"	"17031"	"17008"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"124.0"	""	"106.9"	""	"109.6"	""	"213.0"	"1.7"	"213.2"	"207.3"	""	"798"	"35"	"36.000"	"29.000"	"0.0133959308082939"	""	"0.001812"	"0.02072"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEETVAK"	"[K].gLEETVAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.6735"	"0.0000"	"1"	"1"	"1"	"652.89502"	"1304.78276"	"1304.78259"	"0.13"	"0.00009"	"14/60"	"14"	"60"	"2814621.39569092"	"HCD"	"MS2"	"24.99527"	"210.9"	"100.000"	"51.3865"	"15891"	"15891"	"15869"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"293.1"	""	"282.6"	""	"288.8"	""	"328.6"	""	"403.4"	"406.3"	""	"798"	"49"	"36.000"	"29.000"	"0.000466630257016929"	""	"0"	"0.001768"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETNELLK"	"[K].eTNELLk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"G3V7P1"	"Syntaxin-12 OS=Rattus norvegicus OX=10116 GN=Stx12 PE=1 SV=1"	"G3V7P1"	"Syntaxin-12 OS=Rattus norvegicus OX=10116 GN=Stx12 PE=1 SV=1"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"1"	"652.89508"	"1304.78288"	"1304.78259"	"0.23"	"0.00015"	"12/62"	"12"	"62"	"1108047.25616455"	"HCD"	"MS2"	"21.25205"	"98.3"	"100.000"	"53.9404"	"16945"	"16945"	"16923"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"123.2"	""	"102.5"	""	"96.0"	""	"208.6"	""	"214.0"	"190.0"	""	"798"	"36"	"36.000"	"29.000"	"0.00922513851280063"	""	"0.001374"	"0.01711"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLAEDIMR"	"[R].dNLAEDIMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"653.33655"	"1305.66582"	"1305.66702"	"-0.92"	"-0.00060"	"7/88"	"7"	"88"	"6365384.41552734"	"HCD"	"MS2"	"0"	"270.5"	"100.000"	"73.4314"	"24840"	"24840"	"24823"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"384.2"	""	"361.2"	""	"333.4"	""	"234.2"	""	"597.1"	"663.1"	""	"658"	"54"	"35.000"	"28.000"	"0.000141317484405648"	""	"0"	"0.0004893"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLAEDIMR"	"[R].dNLAEDIMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.6327"	"0.0000"	"1"	"1"	"1"	"653.33667"	"1305.66606"	"1305.66702"	"-0.73"	"-0.00048"	"7/88"	"7"	"88"	"1520929.20690918"	"HCD"	"MS2"	"0"	"78.4"	"100.000"	"73.8500"	"24996"	"24996"	"24978"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"109.5"	""	"106.2"	""	"94.6"	""	"80.9"	""	"163.3"	"192.1"	""	"670"	"49"	"35.000"	"28.000"	"0.000415953523043457"	""	"0"	"0.0004682"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLAEDIMR"	"[R].dNLAEDIMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.5273"	"0.0000"	"1"	"1"	"1"	"653.33685"	"1305.66643"	"1305.66702"	"-0.45"	"-0.00029"	"7/88"	"7"	"88"	"472070.301940918"	"HCD"	"MS2"	"22.10878"	"28.8"	"100.000"	"73.1363"	"24719"	"24719"	"24702"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.8"	""	"34.7"	""	"41.9"	""	"29.7"	"3.3"	"62.3"	"60.2"	""	"670"	"55"	"35.000"	"28.000"	"0.000110673796247333"	""	"0"	"0.000648"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLAEDIMR"	"[R].dNLAEDIMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"653.33722"	"1305.66716"	"1305.66702"	"0.11"	"0.00007"	"7/88"	"7"	"88"	"1490242.58337402"	"HCD"	"MS2"	"2.783817"	"72.4"	"100.000"	"73.7174"	"24956"	"24956"	"24939"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"99.5"	""	"100.3"	""	"88.5"	""	"68.4"	""	"160.2"	"177.9"	""	"664"	"48"	"35.000"	"28.000"	"0.000504821779871189"	""	"0"	"0.0001752"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLAEDIMR"	"[R].dNLAEDIMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"653.33771"	"1305.66814"	"1305.66702"	"0.86"	"0.00056"	"7/88"	"7"	"88"	"439176.046508789"	"HCD"	"MS2"	"32.14734"	"28.6"	"100.000"	"73.2688"	"24760"	"24760"	"24742"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.9"	""	"43.2"	""	"43.6"	""	"29.1"	"1.3"	"62.1"	"56.1"	""	"667"	"48"	"35.000"	"28.000"	"0.000524923285299484"	""	"0"	"0.0004303"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLAEDIMR"	"[R].dNLAEDIMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.5741"	"0.0000"	"1"	"1"	"1"	"653.33777"	"1305.66826"	"1305.66702"	"0.95"	"0.00062"	"7/88"	"7"	"88"	"6192928.77648926"	"HCD"	"MS2"	"0"	"278.6"	"100.000"	"73.5528"	"24876"	"24876"	"24859"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"380.0"	""	"382.5"	""	"338.8"	""	"242.8"	""	"617.8"	"696.1"	""	"682"	"54"	"35.000"	"28.000"	"0.000147487216382938"	""	"0"	"0.0004803"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMNNLDSNR"	"[K].lMNNLDSNR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"0"	"2"	"2"	"0.0667"	"0.0000"	"1"	"1"	"3"	"653.34338"	"1305.67949"	"1305.67825"	"0.95"	"0.00062"	"6/78"	"6"	"78"	"902814.654602051"	"HCD"	"MS2"	"48.00595"	"68.8"	"100.000"	"49.2009"	"15012"	"15012"	"14988"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"76.6"	""	"61.6"	""	"74.3"	""	"118.1"	""	"156.5"	"173.6"	""	"737"	"15"	"35.000"	"28.000"	"1.2895479404995"	"25"	"0.00912"	"0.1175"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVSDDMK"	"[K].hVSDDmk.[T]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"3"	"3"	"0.7576"	"0.0000"	"1"	"1"	"1"	"435.89981"	"1305.68488"	"1305.68731"	"-1.86"	"-0.00081"	"9/52"	"9"	"52"	"15915591.1776733"	"HCD"	"MS2"	"14.98528"	"397.8"	"64.718"	"21.3856"	"3732"	"3732"	"3716"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"431.8"	""	"455.5"	""	"543.9"	""	"1011.4"	""	"711.1"	"616.9"	""	"775"	"33"	"35.000"	"28.000"	"0.0190226802009133"	"23"	"0.002973"	"0.02932"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVSDDMK"	"[K].hVSDDmk.[T]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"435.89987"	"1305.68506"	"1305.68731"	"-1.72"	"-0.00075"	"6/52"	"6"	"52"	"15193821.8811035"	"HCD"	"MS2"	"10.77751"	"306.6"	"48.666"	"21.4635"	"3746"	"3746"	"3729"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"355.3"	""	"369.0"	""	"424.9"	""	"759.2"	""	"540.7"	"456.5"	""	"774"	"36"	"35.000"	"28.000"	"0.0105368540622615"	"22"	"0.002547"	"0.02516"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVSDDMK"	"[K].hVSDDmk.[T]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"653.34625"	"1305.68523"	"1305.68731"	"-1.59"	"-0.00104"	"5/52"	"5"	"52"	"1769733.51629639"	"HCD"	"MS2"	"0"	"110.3"	"100.000"	"21.3394"	"3714"	"3714"	"3688"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"117.2"	""	"139.5"	""	"157.9"	""	"297.4"	""	"182.8"	"154.6"	""	"785"	"27"	"35.000"	"28.000"	"0.0821939138921476"	"21"	"0.00912"	"0.1193"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVSDDMK"	"[K].hVSDDmk.[T]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"653.34723"	"1305.68718"	"1305.68731"	"-0.10"	"-0.00006"	"5/52"	"5"	"52"	"1616324.06536865"	"HCD"	"MS2"	"0"	"102.3"	"100.000"	"21.5209"	"3770"	"3770"	"3742"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.2"	""	"125.1"	""	"147.6"	""	"252.0"	""	"178.9"	"143.9"	""	"762"	"26"	"35.000"	"28.000"	"0.10688702160596"	"21"	"0.00736"	"0.08627"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VASSTLLDDR"	"[R].vASSTLLDDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"653.36395"	"1305.72063"	"1305.72116"	"-0.41"	"-0.00027"	"8/84"	"8"	"84"	"1360730.60754395"	"HCD"	"MS2"	"7.927352"	"76.0"	"100.000"	"56.4761"	"17962"	"17962"	"17943"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"74.2"	""	"90.4"	""	"113.3"	""	"115.3"	"2.3"	"155.4"	"171.4"	""	"878"	"60"	"36.000"	"29.000"	"3.92161107358916E-05"	"25"	"0"	"1.262E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VASSTLLDDR"	"[R].vASSTLLDDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.8382"	"0.0000"	"1"	"1"	"1"	"653.36407"	"1305.72087"	"1305.72116"	"-0.22"	"-0.00014"	"8/84"	"8"	"84"	"1551251.15576172"	"HCD"	"MS2"	"0"	"74.8"	"100.000"	"56.0224"	"17791"	"17791"	"17773"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"77.2"	""	"79.3"	""	"98.3"	""	"131.2"	""	"170.0"	"155.9"	""	"877"	"68"	"36.000"	"29.000"	"7.06268111025671E-06"	"28"	"0"	"1.945E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VASSTLLDDR"	"[R].vASSTLLDDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"653.36432"	"1305.72136"	"1305.72116"	"0.15"	"0.00010"	"7/84"	"7"	"84"	"1192131.95904541"	"HCD"	"MS2"	"7.434542"	"63.4"	"100.000"	"56.3196"	"17912"	"17912"	"17894"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.4"	""	"75.9"	""	"74.5"	""	"107.6"	""	"143.0"	"127.1"	""	"874"	"66"	"36.000"	"29.000"	"9.82836862750235E-06"	"26"	"0"	"2.233E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VASSTLLDDR"	"[R].vASSTLLDDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"653.36456"	"1305.72185"	"1305.72116"	"0.53"	"0.00034"	"8/84"	"8"	"84"	"1348810.5302124"	"HCD"	"MS2"	"0"	"66.5"	"100.000"	"56.1813"	"17842"	"17842"	"17821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"69.5"	""	"78.8"	""	"89.3"	""	"110.6"	""	"158.6"	"129.9"	""	"895"	"68"	"36.000"	"29.000"	"7.42665141078309E-06"	"27"	"0"	"2.085E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSEQVEK"	"[R].qSEQVEk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"653.37244"	"1305.73760"	"1305.74145"	"-2.95"	"-0.00193"	"6/68"	"6"	"68"	"1031936.21160889"	"HCD"	"MS2"	"0"	"84.6"	"100.000"	"27.5585"	"6211"	"6211"	"6188"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"123.8"	""	"85.8"	""	"84.2"	""	"155.5"	"0.4"	"164.1"	"189.0"	""	"878"	"20"	"36.000"	"29.000"	"0.392161107358916"	"26"	"0.00736"	"0.08699"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSEQVEK"	"[R].qSEQVEk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"653.37268"	"1305.73808"	"1305.74145"	"-2.58"	"-0.00168"	"6/68"	"6"	"68"	"688416.954589844"	"HCD"	"MS2"	"0"	"57.2"	"100.000"	"27.5601"	"6227"	"6227"	"6200"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.3"	""	"51.6"	""	"67.1"	""	"106.3"	"0.9"	"122.4"	"116.7"	""	"884"	"34"	"36.000"	"29.000"	"0.0174350127517273"	"27"	"0.003449"	"0.03255"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLQDEK"	"[R].nTLQDEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"653.37384"	"1305.74040"	"1305.74145"	"-0.80"	"-0.00052"	"5/68"	"5"	"68"	"843171.014709473"	"HCD"	"MS2"	"18.14845"	"79.2"	"100.000"	"34.2844"	"8943"	"8943"	"8919"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.4"	""	"52.0"	""	"67.3"	""	"179.0"	""	"241.4"	"157.8"	""	"890"	"30"	"36.000"	"29.000"	"0.0419140870452664"	"23"	"0.002973"	"0.02923"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLQDEK"	"[R].nTLQDEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.4062"	"0.0000"	"1"	"1"	"1"	"653.37415"	"1305.74101"	"1305.74145"	"-0.33"	"-0.00022"	"6/68"	"6"	"68"	"937533.192077637"	"HCD"	"MS2"	"15.46293"	"84.6"	"100.000"	"34.2336"	"8929"	"8929"	"8903"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.3"	""	"55.2"	""	"65.7"	""	"192.1"	"1.4"	"247.5"	"178.8"	""	"871"	"32"	"36.000"	"29.000"	"0.0261209013709274"	""	"0.003358"	"0.03235"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLLEEK"	"[K].tDLLEEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"0"	"2"	"2"	"0.3514"	"0.0000"	"1"	"1"	"3"	"653.38635"	"1305.76543"	"1305.76660"	"-0.90"	"-0.00059"	"12/58"	"12"	"58"	"968706.445068359"	"HCD"	"MS2"	"0"	"77.4"	"100.000"	"67.8138"	"22551"	"22551"	"22537"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"93.7"	""	"82.7"	""	"89.4"	""	"145.7"	"0.9"	"160.6"	"161.9"	""	"858"	"37"	"36.000"	"29.000"	"0.00793336237541596"	""	"0.002056"	"0.02227"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLLEEK"	"[K].tDLLEEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"0"	"2"	"2"	"0.4062"	"0.0000"	"1"	"1"	"3"	"653.38641"	"1305.76555"	"1305.76660"	"-0.81"	"-0.00053"	"6/58"	"6"	"58"	"383386.981933594"	"HCD"	"MS2"	"0"	"31.7"	"100.000"	"68.1321"	"22681"	"22681"	"22658"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.3"	""	"34.4"	""	"32.8"	""	"56.9"	"0.6"	"70.5"	"66.6"	""	"858"	"32"	"36.000"	"29.000"	"0.0295431835131694"	""	"0.002379"	"0.02473"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLLEEK"	"[K].tDLLEEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"0"	"2"	"2"	"0.3611"	"0.0000"	"1"	"1"	"3"	"653.38666"	"1305.76604"	"1305.76660"	"-0.43"	"-0.00028"	"12/58"	"12"	"58"	"1073216.61834717"	"HCD"	"MS2"	"3.385311"	"85.1"	"100.000"	"68.0163"	"22619"	"22619"	"22599"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"100.3"	""	"94.8"	""	"104.5"	""	"150.2"	""	"180.8"	"178.6"	""	"793"	"36"	"35.000"	"28.000"	"0.0110215631066656"	""	"0.001546"	"0.0186"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEIEEK"	"[K].sLEIEEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"4"	"P36876; P56932"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2d PE=2 SV=1"	"P36876; P97888; P36877; P56932"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2c PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2b PE=1 SV=2; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2d PE=2 SV=1"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"3"	"653.38702"	"1305.76677"	"1305.76660"	"0.13"	"0.00008"	"6/58"	"6"	"58"	"743302.897766113"	"HCD"	"MS2"	"0"	"56.6"	"100.000"	"58.3834"	"18754"	"18754"	"18735"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.8"	""	"73.0"	""	"77.0"	""	"82.4"	""	"109.8"	"115.1"	""	"791"	"20"	"35.000"	"28.000"	"0.412236543325052"	"27"	"0.004942"	"0.05482"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEIEEK"	"[K].sLEIEEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"4"	"P36876; P56932"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2d PE=2 SV=1"	"P36876; P97888; P36877; P56932"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2c PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2b PE=1 SV=2; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2d PE=2 SV=1"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"653.38715"	"1305.76702"	"1305.76660"	"0.32"	"0.00021"	"12/58"	"12"	"58"	"1846663.35461426"	"HCD"	"MS2"	"8.741792"	"139.5"	"100.000"	"58.0728"	"18627"	"18627"	"18607"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"221.5"	""	"158.1"	""	"203.6"	""	"224.6"	"2.8"	"252.5"	"257.8"	""	"812"	"35"	"36.000"	"29.000"	"0.0139806071889915"	""	"0.002973"	"0.02894"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEIEEK"	"[K].sLEIEEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"4"	"P36876; P56932"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2d PE=2 SV=1"	"P36876; P97888; P36877; P56932"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2c PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2b PE=1 SV=2; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2d PE=2 SV=1"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"653.38721"	"1305.76714"	"1305.76660"	"0.41"	"0.00027"	"12/58"	"12"	"58"	"1727527.66894531"	"HCD"	"MS2"	"5.777904"	"129.1"	"100.000"	"58.2610"	"18689"	"18689"	"18671"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"213.6"	""	"160.4"	""	"174.4"	""	"210.6"	"1.2"	"226.1"	"235.8"	""	"812"	"35"	"36.000"	"29.000"	"0.0141424949904621"	""	"0.00344"	"0.03238"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEIEEK"	"[K].sLEIEEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"4"	"P36876; P56932"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2d PE=2 SV=1"	"P36876; P97888; P36877; P56932"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2c PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2b PE=1 SV=2; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2d PE=2 SV=1"	"0"	"2"	"2"	"0.0526"	"0.0000"	"1"	"1"	"3"	"653.38745"	"1305.76763"	"1305.76660"	"0.78"	"0.00051"	"6/58"	"6"	"58"	"764812.47869873"	"HCD"	"MS2"	"22.09374"	"61.2"	"100.000"	"58.5698"	"18815"	"18815"	"18795"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.4"	""	"87.8"	""	"78.6"	""	"92.8"	""	"105.4"	"128.3"	""	"754"	"19"	"35.000"	"28.000"	"0.518013824579718"	"24"	"0.005874"	"0.06584"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDNTTAK"	"[K].vVDNTTAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.6200"	"0.0000"	"1"	"1"	"1"	"653.39160"	"1305.77593"	"1305.77784"	"-1.46"	"-0.00096"	"14/70"	"14"	"70"	"1599560.76843262"	"HCD"	"MS2"	"11.36778"	"133.8"	"100.000"	"35.9484"	"9620"	"9620"	"9601"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"200.3"	""	"179.4"	""	"180.7"	""	"232.8"	"0.0"	"233.9"	"239.4"	""	"766"	"50"	"35.000"	"28.000"	"0.000395547618406615"	""	"0"	"0.001398"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDNTTAK"	"[K].vVDNTTAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.5161"	"0.0000"	"1"	"1"	"1"	"653.39160"	"1305.77593"	"1305.77784"	"-1.46"	"-0.00096"	"7/70"	"7"	"70"	"1183903.56555176"	"HCD"	"MS2"	"0"	"96.2"	"100.000"	"36.0637"	"9672"	"9672"	"9656"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"131.3"	""	"112.8"	""	"134.3"	""	"169.2"	""	"176.5"	"194.6"	""	"766"	"31"	"35.000"	"28.000"	"0.0290535211236177"	""	"0.0003538"	"0.007319"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDNTTAK"	"[K].vVDNTTAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"653.39185"	"1305.77641"	"1305.77784"	"-1.09"	"-0.00071"	"14/70"	"14"	"70"	"1057680.65631104"	"HCD"	"MS2"	"0"	"96.5"	"100.000"	"35.7471"	"9543"	"9543"	"9520"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"154.1"	""	"129.1"	""	"120.9"	""	"173.0"	"2.2"	"170.2"	"163.8"	""	"766"	"50"	"35.000"	"28.000"	"0.000429733067997652"	""	"0"	"0.001543"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDNTTAK"	"[K].vVDNTTAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"653.39337"	"1305.77947"	"1305.77784"	"1.25"	"0.00081"	"7/70"	"7"	"70"	"1468258.65466309"	"HCD"	"MS2"	"41.94044"	"95.0"	"100.000"	"36.2992"	"9761"	"9761"	"9742"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"128.9"	""	"116.6"	""	"124.3"	""	"145.9"	""	"191.4"	"201.9"	""	"688"	"11"	"35.000"	"28.000"	"2.70743751655114"	"15"	"0.002973"	"0.02954"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IREEYPDR"	"[K].iREEYPDR.[I]"	"N-Term(TMT6plex)"	"2"	"4"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"1"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"436.23599"	"1306.69342"	"1306.69528"	"-1.42"	"-0.00062"	"6/76"	"6"	"76"	"26090700.5737305"	"HCD"	"MS2"	"5.65254"	"156.4"	"20.889"	"28.9443"	"6789"	"6789"	"6772"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"247.8"	""	"169.1"	""	"212.0"	""	"240.4"	"2.0"	"315.0"	"296.7"	""	"758"	"17"	"35.000"	"28.000"	"0.817785131068861"	"15"	"0.003449"	"0.03369"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IREEYPDR"	"[K].iREEYPDR.[I]"	"N-Term(TMT6plex)"	"2"	"4"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"1"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"436.23602"	"1306.69352"	"1306.69528"	"-1.35"	"-0.00059"	"6/76"	"6"	"76"	"11623050.8218994"	"HCD"	"MS2"	"33.10787"	"330.6"	"100.000"	"28.7176"	"6684"	"6684"	"6663"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"537.4"	""	"377.7"	""	"415.9"	""	"551.8"	""	"656.6"	"595.7"	""	"758"	"19"	"35.000"	"28.000"	"0.484885514275702"	"19"	"0.005617"	"0.06416"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEAEAFAVGAR"	"[R].gEAEAFAVGAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"653.85101"	"1306.69475"	"1306.69528"	"-0.41"	"-0.00027"	"9/84"	"9"	"84"	"2374173.01196289"	"HCD"	"MS2"	"16.94812"	"144.3"	"100.000"	"51.6883"	"16014"	"16014"	"15995"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"147.8"	""	"167.4"	""	"147.1"	""	"239.7"	""	"353.6"	"320.4"	""	"784"	"51"	"35.000"	"28.000"	"0.000327556383146649"	"23"	"0"	"1.249E-05"	"0.882"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEAEAFAVGAR"	"[R].gEAEAFAVGAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"653.85101"	"1306.69475"	"1306.69528"	"-0.41"	"-0.00027"	"9/84"	"9"	"84"	"2377430.30114746"	"HCD"	"MS2"	"15.44238"	"133.0"	"100.000"	"51.3328"	"15880"	"15880"	"15861"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"122.9"	""	"155.0"	""	"137.3"	""	"244.2"	"2.8"	"301.6"	"302.3"	""	"784"	"51"	"35.000"	"28.000"	"0.000342204776408139"	"22"	"0"	"1.509E-05"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IREEYPDR"	"[K].iREEYPDR.[I]"	"N-Term(TMT6plex)"	"2"	"4"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"1"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"436.23645"	"1306.69480"	"1306.69528"	"-0.37"	"-0.00016"	"6/76"	"6"	"76"	"11671820.8927612"	"HCD"	"MS2"	"16.61183"	"343.2"	"100.000"	"28.6621"	"6674"	"6674"	"6661"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"537.2"	""	"407.0"	""	"463.3"	""	"574.8"	""	"670.4"	"600.2"	""	"784"	"22"	"35.000"	"28.000"	"0.23511810189216"	"18"	"0.006443"	"0.07283"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IREEYPDR"	"[K].iREEYPDR.[I]"	"N-Term(TMT6plex)"	"2"	"4"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"1"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"436.23654"	"1306.69507"	"1306.69528"	"-0.16"	"-0.00007"	"6/76"	"6"	"76"	"14126521.8634033"	"HCD"	"MS2"	"7.115345"	"177.1"	"44.122"	"29.0324"	"6812"	"6812"	"6795"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"290.5"	""	"192.0"	""	"233.2"	""	"285.6"	""	"348.1"	"330.5"	""	"753"	"19"	"35.000"	"28.000"	"0.51376555092573"	"18"	"0.004942"	"0.0539"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPDPQSHLR"	"[R].qPDPQSHLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"3"	"3"	"0.5789"	"0.0000"	"1"	"1"	"1"	"436.24081"	"1306.70789"	"1306.70651"	"1.05"	"0.00046"	"6/86"	"6"	"86"	"4834242.67150879"	"HCD"	"MS2"	"50.11559"	"204.7"	"100.000"	"23.1837"	"4464"	"4464"	"4435"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"286.2"	""	"263.4"	""	"269.7"	""	"336.4"	"15.9"	"388.7"	"380.6"	""	"794"	"19"	"35.000"	"28.000"	"0.504417919767791"	"22"	"0.002937"	"0.02787"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPSLLDVR"	"[R].yDPSLLDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PPN4"	"Carbonic anhydrase-related protein OS=Rattus norvegicus OX=10116 GN=Ca8 PE=1 SV=3"	"Q5PPN4"	"Carbonic anhydrase-related protein OS=Rattus norvegicus OX=10116 GN=Ca8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"653.86273"	"1306.71819"	"1306.72043"	"-1.72"	"-0.00112"	"6/74"	"6"	"74"	"660995.207580566"	"HCD"	"MS2"	"44.64667"	"33.4"	"100.000"	"81.6517"	"28149"	"28149"	"28132"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"62.5"	""	"44.9"	""	"48.2"	""	"50.9"	"0.8"	"51.3"	"57.4"	""	"893"	"26"	"36.000"	"29.000"	"0.105152950525957"	"14"	"0.000936"	"0.01238"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPSLLDVR"	"[R].yDPSLLDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PPN4"	"Carbonic anhydrase-related protein OS=Rattus norvegicus OX=10116 GN=Ca8 PE=1 SV=3"	"Q5PPN4"	"Carbonic anhydrase-related protein OS=Rattus norvegicus OX=10116 GN=Ca8 PE=1 SV=3"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"653.86426"	"1306.72124"	"1306.72043"	"0.62"	"0.00040"	"7/74"	"7"	"74"	"757364.526489258"	"HCD"	"MS2"	"42.35432"	"36.4"	"100.000"	"81.6392"	"28141"	"28141"	"28129"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.3"	""	"51.0"	""	"56.3"	""	"58.3"	""	"52.8"	"62.2"	""	"921"	"25"	"36.000"	"29.000"	"0.143955954856058"	"21"	"0.0001301"	"0.004282"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEDTDK"	"[R].lQEDTDk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"653.86530"	"1306.72331"	"1306.72547"	"-1.65"	"-0.00108"	"6/64"	"6"	"64"	"928329.500244141"	"HCD"	"MS2"	"0"	"87.1"	"100.000"	"38.2613"	"10561"	"10561"	"10536"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"115.6"	""	"87.5"	"2.4"	"88.7"	""	"154.9"	"1.7"	"183.0"	"194.4"	""	"908"	"19"	"36.000"	"29.000"	"0.57950321920035"	"20"	"0.008668"	"0.1104"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEDTDK"	"[R].lQEDTDk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"653.86536"	"1306.72344"	"1306.72547"	"-1.55"	"-0.00102"	"6/64"	"6"	"64"	"882475.387817383"	"HCD"	"MS2"	"0"	"86.3"	"100.000"	"38.4829"	"10643"	"10643"	"10622"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"120.9"	""	"84.3"	""	"93.3"	""	"149.9"	""	"187.2"	"184.5"	""	"908"	"19"	"36.000"	"29.000"	"0.576840643764678"	"26"	"0.007627"	"0.09169"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMTEESVIR"	"[R].lMTEESVIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYG5"	"Ethylmalonyl-CoA decarboxylase OS=Rattus norvegicus OX=10116 GN=Echdc1 PE=1 SV=1"	"Q6AYG5"	"Ethylmalonyl-CoA decarboxylase OS=Rattus norvegicus OX=10116 GN=Echdc1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"653.86560"	"1306.72392"	"1306.72380"	"0.09"	"0.00006"	"7/70"	"7"	"70"	"601016.447998047"	"HCD"	"MS2"	"19.51478"	"37.1"	"100.000"	"67.6077"	"22453"	"22453"	"22430"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.3"	""	"56.4"	""	"64.6"	""	"38.4"	"0.2"	"67.2"	"66.7"	""	"904"	"42"	"36.000"	"29.000"	"0.00265545187343459"	"27"	"0"	"0.0009132"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMTEESVIR"	"[R].lMTEESVIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYG5"	"Ethylmalonyl-CoA decarboxylase OS=Rattus norvegicus OX=10116 GN=Echdc1 PE=1 SV=1"	"Q6AYG5"	"Ethylmalonyl-CoA decarboxylase OS=Rattus norvegicus OX=10116 GN=Echdc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"653.86560"	"1306.72392"	"1306.72380"	"0.09"	"0.00006"	"7/70"	"7"	"70"	"607653.849121094"	"HCD"	"MS2"	"12.00136"	"40.4"	"100.000"	"67.4333"	"22397"	"22397"	"22379"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.2"	""	"62.4"	""	"62.3"	""	"44.6"	"2.0"	"75.7"	"74.1"	""	"904"	"51"	"36.000"	"29.000"	"0.000396404371156923"	"22"	"0"	"0.0001763"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GHAVGDIPGVR"	"[K].gHAVGDIPGVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"436.25189"	"1306.74112"	"1306.74290"	"-1.36"	"-0.00059"	"8/80"	"8"	"80"	"6202900.49108887"	"HCD"	"MS2"	"32.28626"	"67.3"	"100.000"	"37.0230"	"10056"	"10056"	"10034"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.7"	""	"87.9"	""	"94.5"	""	"117.7"	"0.8"	"132.3"	"114.3"	""	"857"	"62"	"36.000"	"29.000"	"2.50006227181299E-05"	"20"	"0"	"5.72E-06"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GHAVGDIPGVR"	"[K].gHAVGDIPGVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"436.25201"	"1306.74149"	"1306.74290"	"-1.08"	"-0.00047"	"8/80"	"8"	"80"	"5819943.50616455"	"HCD"	"MS2"	"36.18595"	"67.5"	"100.000"	"36.7760"	"9961"	"9961"	"9939"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"104.5"	""	"92.5"	""	"94.9"	""	"113.2"	"1.1"	"121.0"	"111.8"	""	"857"	"67"	"36.000"	"29.000"	"8.14612042947135E-06"	"17"	"0"	"7.757E-06"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGDVIDTK"	"[K].tGDVIDTk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q810F4"	"Protein FAM3C OS=Rattus norvegicus OX=10116 GN=Fam3c PE=2 SV=1"	"Q810F4"	"Protein FAM3C OS=Rattus norvegicus OX=10116 GN=Fam3c PE=2 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"653.88458"	"1306.76189"	"1306.76185"	"0.03"	"0.00002"	"6/68"	"6"	"68"	"989018.694335938"	"HCD"	"MS2"	"38.98442"	"80.1"	"100.000"	"47.3163"	"14232"	"14232"	"14209"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"109.8"	""	"88.6"	""	"93.7"	""	"148.1"	"1.4"	"162.1"	"156.5"	""	"772"	"34"	"35.000"	"28.000"	"0.0162774850323433"	"23"	"0.0006732"	"0.008192"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGDVIDTK"	"[K].tGDVIDTk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q810F4"	"Protein FAM3C OS=Rattus norvegicus OX=10116 GN=Fam3c PE=2 SV=1"	"Q810F4"	"Protein FAM3C OS=Rattus norvegicus OX=10116 GN=Fam3c PE=2 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"653.88519"	"1306.76311"	"1306.76185"	"0.96"	"0.00063"	"6/68"	"6"	"68"	"1134303.71673584"	"HCD"	"MS2"	"42.68693"	"96.5"	"100.000"	"47.0892"	"14151"	"14151"	"14126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"129.8"	""	"105.6"	""	"121.6"	""	"173.5"	""	"204.3"	"188.1"	""	"754"	"34"	"35.000"	"28.000"	"0.0147347017713736"	"24"	"0"	"0.003454"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASAEEIK"	"[R].tASAEEIk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"0"	"2"	"2"	"0.5476"	"0.0000"	"1"	"1"	"1"	"653.88568"	"1306.76409"	"1306.76185"	"1.71"	"0.00112"	"7/66"	"7"	"66"	"1950330.36730957"	"HCD"	"MS2"	"0"	"162.1"	"100.000"	"39.2341"	"10958"	"10958"	"10931"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"266.2"	""	"212.8"	""	"231.8"	""	"249.6"	""	"288.5"	"285.5"	""	"745"	"42"	"35.000"	"28.000"	"0.00249532017007656"	""	"0.001886"	"0.02162"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALENDPDCR"	"[K].aLENDPDcR.[H]"	"N-Term(TMT6plex); C8(Methylthio)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"654.29950"	"1307.59172"	"1307.59214"	"-0.32"	"-0.00021"	"6/82"	"6"	"82"	"1416729.08044434"	"HCD"	"MS2"	"20.46822"	"85.0"	"100.000"	"44.8354"	"13233"	"13233"	"13214"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"136.8"	""	"87.6"	""	"103.5"	""	"133.2"	""	"173.7"	"178.4"	""	"191"	"28"	"29.000"	"22.000"	"0.0155597771117094"	"15"	"0.0006732"	"0.008815"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALENDPDCR"	"[K].aLENDPDcR.[H]"	"N-Term(TMT6plex); C8(Methylthio)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"654.30011"	"1307.59294"	"1307.59214"	"0.62"	"0.00040"	"6/82"	"6"	"82"	"1210211.3651123"	"HCD"	"MS2"	"32.50158"	"75.7"	"100.000"	"44.9553"	"13271"	"13271"	"13247"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"112.6"	""	"89.2"	""	"100.3"	""	"110.2"	""	"152.7"	"158.9"	""	"197"	"21"	"29.000"	"22.000"	"0.0795126504795105"	"14"	"0.0008629"	"0.01095"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIETDPANR"	"[R].yIETDPANR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"654.34204"	"1307.67681"	"1307.67930"	"-1.90"	"-0.00125"	"7/70"	"7"	"70"	"3185731.88470459"	"HCD"	"MS2"	"0"	"147.1"	"100.000"	"41.2067"	"11751"	"11751"	"11728"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"199.4"	""	"196.3"	""	"180.0"	""	"239.6"	""	"280.5"	"299.9"	""	"753"	"39"	"35.000"	"28.000"	"0.00491773339381638"	"26"	"0"	"0.001023"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIETDPANR"	"[R].yIETDPANR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"654.34222"	"1307.67717"	"1307.67930"	"-1.62"	"-0.00106"	"7/70"	"7"	"70"	"3313666.03399658"	"HCD"	"MS2"	"0"	"149.1"	"100.000"	"41.0292"	"11688"	"11688"	"11667"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"200.8"	""	"197.3"	""	"180.1"	""	"243.0"	""	"302.1"	"294.4"	""	"754"	"38"	"35.000"	"28.000"	"0.00622789597932339"	"28"	"0"	"0.001361"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEDEAFQR"	"[R].lAEDEAFQR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"654.34265"	"1307.67803"	"1307.67930"	"-0.97"	"-0.00063"	"7/70"	"7"	"70"	"1468098.47137451"	"HCD"	"MS2"	"7.723629"	"84.3"	"100.000"	"52.8155"	"16474"	"16474"	"16455"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.9"	""	"96.7"	""	"105.0"	""	"125.3"	"3.1"	"156.9"	"187.1"	""	"738"	"47"	"35.000"	"28.000"	"0.000729501797201277"	"27"	"0"	"0.0005129"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIETDPANR"	"[R].yIETDPANR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"654.34277"	"1307.67827"	"1307.67930"	"-0.78"	"-0.00051"	"7/70"	"7"	"70"	"15114175.5524292"	"HCD"	"MS2"	"0"	"432.2"	"80.800"	"41.3043"	"11799"	"11799"	"11785"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"594.6"	""	"535.0"	""	"588.6"	""	"652.4"	""	"813.2"	"919.3"	""	"739"	"38"	"35.000"	"28.000"	"0.00616047845037617"	"25"	"0"	"0.001193"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIETDPANR"	"[R].yIETDPANR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"654.34290"	"1307.67851"	"1307.67930"	"-0.60"	"-0.00039"	"7/70"	"7"	"70"	"1763474.05541992"	"HCD"	"MS2"	"36.52427"	"101.9"	"100.000"	"41.6261"	"11931"	"11931"	"11905"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"109.9"	""	"111.8"	""	"109.7"	""	"161.4"	""	"229.9"	"251.1"	""	"766"	"20"	"35.000"	"28.000"	"0.359086248652612"	"14"	"0.000936"	"0.01212"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEDEAFQR"	"[R].lAEDEAFQR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"654.34296"	"1307.67864"	"1307.67930"	"-0.50"	"-0.00033"	"7/70"	"7"	"70"	"1579571.72229004"	"HCD"	"MS2"	"6.185435"	"90.1"	"100.000"	"52.5523"	"16378"	"16378"	"16360"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"127.6"	""	"105.6"	""	"124.2"	""	"127.4"	"0.5"	"165.9"	"203.2"	""	"760"	"47"	"35.000"	"28.000"	"0.000710859213339004"	"27"	"0"	"0.0004924"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIETDPANR"	"[R].yIETDPANR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"654.34320"	"1307.67912"	"1307.67930"	"-0.13"	"-0.00009"	"12/70"	"12"	"70"	"1695173.72485352"	"HCD"	"MS2"	"30.87482"	"91.0"	"100.000"	"41.7970"	"11990"	"11990"	"11970"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"105.7"	""	"93.5"	""	"102.0"	""	"152.8"	""	"201.4"	"211.5"	""	"752"	"17"	"35.000"	"28.000"	"0.76592782121735"	"14"	"0.001374"	"0.01779"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIETDPANR"	"[R].yIETDPANR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"654.34326"	"1307.67925"	"1307.67930"	"-0.04"	"-0.00002"	"7/70"	"7"	"70"	"14239160.5289917"	"HCD"	"MS2"	"0"	"420.7"	"82.270"	"41.4728"	"11859"	"11859"	"11848"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"554.3"	""	"532.2"	""	"569.9"	""	"646.0"	""	"783.0"	"912.2"	""	"754"	"40"	"35.000"	"28.000"	"0.00392953670881276"	"26"	"0"	"0.001037"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMVEEGTGLR"	"[R].sMVEEGTGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"654.34418"	"1307.68108"	"1307.68267"	"-1.22"	"-0.00079"	"8/84"	"8"	"84"	"2110697.06036377"	"HCD"	"MS2"	"19.85213"	"108.7"	"100.000"	"45.1761"	"13372"	"13372"	"13351"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"196.4"	""	"193.2"	""	"188.9"	""	"86.4"	""	"155.6"	"207.3"	""	"761"	"60"	"35.000"	"28.000"	"3.46222000236572E-05"	""	"0"	"4.247E-05"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMVEEGTGLR"	"[R].sMVEEGTGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"654.34448"	"1307.68169"	"1307.68267"	"-0.75"	"-0.00049"	"8/84"	"8"	"84"	"1015204.01403809"	"HCD"	"MS2"	"12.21716"	"63.1"	"100.000"	"45.4728"	"13493"	"13493"	"13477"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.8"	""	"97.9"	""	"93.4"	""	"66.3"	"0.0"	"114.8"	"120.9"	""	"780"	"57"	"35.000"	"28.000"	"7.53467643636599E-05"	""	"0"	"1.826E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIDTGMGLER"	"[K].sIDTGMGLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"654.34467"	"1307.68205"	"1307.68267"	"-0.47"	"-0.00031"	"6/88"	"6"	"88"	"1269535.14007568"	"HCD"	"MS2"	"21.81803"	"83.3"	"100.000"	"57.6598"	"18444"	"18444"	"18426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"123.6"	""	"115.0"	""	"111.6"	""	"97.3"	""	"166.7"	"182.9"	""	"774"	"44"	"35.000"	"28.000"	"0.0015657087008691"	"25"	"0"	"0.0002611"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMVEEGTGLR"	"[R].sMVEEGTGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7193"	"0.0000"	"1"	"1"	"1"	"654.34473"	"1307.68218"	"1307.68267"	"-0.37"	"-0.00025"	"8/84"	"8"	"84"	"1838151.70635986"	"HCD"	"MS2"	"42.38601"	"101.6"	"100.000"	"45.3075"	"13415"	"13415"	"13387"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"167.7"	""	"176.1"	""	"172.8"	""	"95.3"	""	"164.8"	"183.9"	""	"774"	"57"	"35.000"	"28.000"	"6.91370691467744E-05"	""	"0"	"3.43E-05"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMVEEGTGLR"	"[R].sMVEEGTGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"654.34497"	"1307.68266"	"1307.68267"	"0.00"	"0.00000"	"7/84"	"7"	"84"	"1258952.65270996"	"HCD"	"MS2"	"0"	"75.0"	"100.000"	"45.6017"	"13534"	"13534"	"13517"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"116.9"	""	"122.3"	""	"119.2"	""	"67.1"	"0.6"	"133.2"	"151.3"	""	"770"	"47"	"35.000"	"28.000"	"0.000840351016059555"	""	"0"	"6.905E-05"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIDTGMGLER"	"[K].sIDTGMGLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"654.34503"	"1307.68279"	"1307.68267"	"0.09"	"0.00006"	"9/88"	"9"	"88"	"1229544.05255127"	"HCD"	"MS2"	"29.41905"	"85.5"	"100.000"	"57.4367"	"18368"	"18368"	"18345"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"132.1"	""	"107.8"	""	"107.7"	""	"111.7"	""	"169.7"	"182.5"	""	"770"	"41"	"35.000"	"28.000"	"0.00275081085539072"	"25"	"0"	"4.719E-05"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVAAVNGLYR"	"[R].dVAAVnGLYR.[V]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"Q6AYH6"	"ER membrane protein complex subunit 10 OS=Rattus norvegicus OX=10116 GN=Emc10 PE=1 SV=1"	"Q6AYH6"	"ER membrane protein complex subunit 10 OS=Rattus norvegicus OX=10116 GN=Emc10 PE=1 SV=1"	"0"	"2"	"2"	"0.5641"	"0.0000"	"1"	"1"	"1"	"654.35870"	"1307.71013"	"1307.71568"	"-4.25"	"-0.00278"	"8/80"	"8"	"80"	"641341.335083008"	"HCD"	"MS2"	"100"	"41.6"	"100.000"	"59.8008"	"19318"	"19318"	"19302"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.8"	""	"51.8"	""	"50.9"	""	"70.7"	""	"91.2"	"85.1"	""	"874"	"39"	"36.000"	"29.000"	"0.00581408580656426"	""	"0"	"0.0007447"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADVDLYQVR"	"[R].aDVDLYQVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTV5"	"26S proteasome non-ATPase regulatory subunit 9 OS=Rattus norvegicus OX=10116 GN=Psmd9 PE=1 SV=1"	"Q9WTV5"	"26S proteasome non-ATPase regulatory subunit 9 OS=Rattus norvegicus OX=10116 GN=Psmd9 PE=1 SV=1"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"654.36090"	"1307.71453"	"1307.71568"	"-0.88"	"-0.00058"	"7/72"	"7"	"72"	"711361.309936523"	"HCD"	"MS2"	"9.277903"	"41.2"	"100.000"	"63.9088"	"20966"	"20966"	"20948"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.5"	""	"49.1"	""	"57.9"	""	"67.0"	""	"78.5"	"75.1"	""	"860"	"45"	"36.000"	"29.000"	"0.00132272163033851"	"24"	"0"	"0.0002411"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEIVADTFR"	"[R].gAEIVADTFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"654.36108"	"1307.71489"	"1307.71568"	"-0.60"	"-0.00040"	"8/82"	"8"	"82"	"1041020.70666504"	"HCD"	"MS2"	"8.165993"	"55.9"	"100.000"	"70.4954"	"23644"	"23644"	"23624"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"80.8"	""	"64.3"	""	"77.6"	""	"100.0"	"0.7"	"88.8"	"117.0"	""	"896"	"49"	"36.000"	"29.000"	"0.000534906670799994"	"22"	"0"	"5.376E-05"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEIVADTFR"	"[R].gAEIVADTFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"654.36115"	"1307.71501"	"1307.71568"	"-0.51"	"-0.00033"	"7/82"	"7"	"82"	"1421692.06018066"	"HCD"	"MS2"	"6.627419"	"66.0"	"100.000"	"70.7902"	"23765"	"23765"	"23748"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.4"	""	"67.3"	""	"88.7"	""	"111.8"	""	"126.3"	"141.8"	""	"890"	"41"	"36.000"	"29.000"	"0.00332935427727464"	"22"	"0"	"5.532E-05"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADVDLYQVR"	"[R].aDVDLYQVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTV5"	"26S proteasome non-ATPase regulatory subunit 9 OS=Rattus norvegicus OX=10116 GN=Psmd9 PE=1 SV=1"	"Q9WTV5"	"26S proteasome non-ATPase regulatory subunit 9 OS=Rattus norvegicus OX=10116 GN=Psmd9 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"654.36121"	"1307.71514"	"1307.71568"	"-0.42"	"-0.00027"	"7/72"	"7"	"72"	"628922.765197754"	"HCD"	"MS2"	"11.77518"	"38.2"	"100.000"	"64.0352"	"21003"	"21003"	"20983"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.3"	""	"51.8"	""	"57.1"	""	"55.7"	""	"72.9"	"73.1"	""	"890"	"45"	"36.000"	"29.000"	"0.00141045752105435"	"21"	"0"	"0.0003061"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEIVADTFR"	"[R].gAEIVADTFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"654.36145"	"1307.71562"	"1307.71568"	"-0.04"	"-0.00003"	"7/82"	"7"	"82"	"1719204.32446289"	"HCD"	"MS2"	"5.121688"	"80.3"	"100.000"	"70.8724"	"23784"	"23784"	"23765"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.6"	""	"99.6"	""	"100.6"	""	"144.9"	"1.1"	"146.4"	"165.4"	""	"878"	"45"	"36.000"	"29.000"	"0.00129260109723765"	"20"	"0"	"8.974E-05"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEIVADTFR"	"[R].gAEIVADTFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"654.36188"	"1307.71648"	"1307.71568"	"0.61"	"0.00040"	"9/82"	"9"	"82"	"646293.58416748"	"HCD"	"MS2"	"19.08046"	"37.7"	"100.000"	"70.5752"	"23663"	"23663"	"23637"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.6"	""	"48.3"	""	"53.7"	""	"66.3"	"0.2"	"62.1"	"78.3"	""	"869"	"38"	"36.000"	"29.000"	"0.00645639036573704"	"19"	"0"	"6.045E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADVDLYQVR"	"[R].aDVDLYQVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTV5"	"26S proteasome non-ATPase regulatory subunit 9 OS=Rattus norvegicus OX=10116 GN=Psmd9 PE=1 SV=1"	"Q9WTV5"	"26S proteasome non-ATPase regulatory subunit 9 OS=Rattus norvegicus OX=10116 GN=Psmd9 PE=1 SV=1"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"654.36249"	"1307.71770"	"1307.71568"	"1.54"	"0.00101"	"7/72"	"7"	"72"	"587942.237182617"	"HCD"	"MS2"	"54.22208"	"38.9"	"100.000"	"63.7353"	"20881"	"20881"	"20859"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.1"	""	"44.5"	""	"59.2"	""	"52.9"	""	"77.6"	"80.8"	""	"870"	"28"	"36.000"	"29.000"	"0.0745571428766165"	"18"	"0"	"0.0007371"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMAELEK"	"[K].eMAELEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ERR2"	"COMM domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Commd5 PE=2 SV=1"	"Q9ERR2"	"COMM domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Commd5 PE=2 SV=1"	"0"	"2"	"2"	"0.4062"	"0.0000"	"1"	"1"	"1"	"654.36682"	"1307.72637"	"1307.72811"	"-1.33"	"-0.00087"	"6/58"	"6"	"58"	"690536.055053711"	"HCD"	"MS2"	"27.26497"	"60.2"	"100.000"	"57.3238"	"18322"	"18322"	"18297"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.4"	""	"77.0"	""	"77.6"	""	"82.4"	"1.0"	"120.7"	"122.6"	""	"913"	"32"	"36.000"	"29.000"	"0.0292038952397829"	""	"0.002973"	"0.02824"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMAELEK"	"[K].eMAELEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ERR2"	"COMM domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Commd5 PE=2 SV=1"	"Q9ERR2"	"COMM domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Commd5 PE=2 SV=1"	"0"	"2"	"2"	"0.1290"	"0.0000"	"1"	"1"	"1"	"654.36743"	"1307.72759"	"1307.72811"	"-0.40"	"-0.00026"	"6/58"	"6"	"58"	"485586.959533691"	"HCD"	"MS2"	"25.73815"	"44.7"	"100.000"	"57.4180"	"18346"	"18346"	"18323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.1"	""	"56.2"	""	"69.7"	""	"63.1"	""	"88.2"	"87.4"	""	"882"	"31"	"36.000"	"29.000"	"0.0366807823056278"	""	"0.001211"	"0.01484"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVNGVASK"	"[K].sSVnGVASk.[S]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"654.38281"	"1307.75835"	"1307.75710"	"0.95"	"0.00062"	"6/88"	"6"	"88"	"866715.72454834"	"HCD"	"MS2"	"100"	"69.9"	"100.000"	"35.6158"	"9486"	"9486"	"9455"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"114.6"	""	"87.0"	""	"94.4"	""	"106.4"	""	"125.4"	"137.1"	""	"710"	"15"	"35.000"	"28.000"	"1.15938680421179"	"23"	"0.0003538"	"0.006687"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEGASPLDFD"	"[R].eEGASPLDFD.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"654.81061"	"1308.61394"	"1308.61569"	"-1.34"	"-0.00088"	"7/92"	"7"	"92"	"349865.124145508"	"HCD"	"MS2"	"37.35144"	"12.4"	"100.000"	"88.3158"	"30770"	"30770"	"30763"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.5"	""	"13.1"	""	"16.8"	""	"19.1"	""	"28.3"	"26.7"	""	"330"	"20"	"32.000"	"25.000"	"0.180918902363625"	"16"	"0.0023"	"0.0237"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDASASAATVR"	"[R].mDASASAATVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"654.83997"	"1308.67266"	"1308.67792"	"-4.02"	"-0.00263"	"9/94"	"9"	"94"	"2465613.13757324"	"HCD"	"MS2"	"0"	"149.5"	"100.000"	"37.1898"	"10130"	"10130"	"10104"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"204.0"	""	"192.1"	""	"189.4"	""	"180.7"	""	"332.9"	"324.0"	""	"661"	"49"	"35.000"	"28.000"	"0.000433682066625846"	"27"	"0"	"4.662E-05"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVQFEENGR"	"[K].tVQFEENGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"654.84064"	"1308.67400"	"1308.67454"	"-0.42"	"-0.00027"	"8/86"	"8"	"86"	"1699266.85449219"	"HCD"	"MS2"	"63.74138"	"136.9"	"100.000"	"39.4135"	"11031"	"11031"	"11007"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"215.8"	""	"174.7"	""	"192.6"	""	"197.0"	""	"262.9"	"255.9"	""	"694"	"19"	"35.000"	"28.000"	"0.402095742585829"	"21"	"0.001211"	"0.01412"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDASASAATVR"	"[R].mDASASAATVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"654.84125"	"1308.67522"	"1308.67792"	"-2.06"	"-0.00135"	"9/94"	"9"	"94"	"2268470.58795166"	"HCD"	"MS2"	"10.81993"	"146.9"	"100.000"	"37.3998"	"10210"	"10210"	"10184"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"213.9"	""	"198.7"	""	"192.1"	""	"165.5"	""	"316.2"	"309.8"	""	"684"	"48"	"35.000"	"28.000"	"0.000576801134682949"	""	"0"	"1.201E-05"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDASASAATVR"	"[R].mDASASAATVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"654.84265"	"1308.67803"	"1308.67792"	"0.08"	"0.00006"	"8/94"	"8"	"94"	"651604.317687988"	"HCD"	"MS2"	"41.99877"	"54.4"	"100.000"	"37.5518"	"10274"	"10274"	"10253"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"85.3"	""	"67.0"	""	"78.1"	""	"61.8"	"0.8"	"114.3"	"109.1"	""	"723"	"11"	"35.000"	"28.000"	"3.12685902637413"	"20"	"0.008478"	"0.1038"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGTDEDK"	"[K].wGTDEDk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"654.84497"	"1308.68266"	"1308.68360"	"-0.72"	"-0.00047"	"6/54"	"6"	"54"	"707296.477722168"	"HCD"	"MS2"	"0"	"68.6"	"100.000"	"48.1257"	"14574"	"14574"	"14546"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.3"	""	"64.7"	""	"72.9"	""	"124.0"	""	"165.3"	"161.2"	""	"735"	"13"	"35.000"	"28.000"	"1.88911041956542"	"22"	"0.007413"	"0.08816"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAVLEYLK"	"[R].EDAVLEYLk.[I]"	"K9(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7049"	"0.0000"	"1"	"1"	"1"	"654.86560"	"1308.72392"	"1308.72485"	"-0.71"	"-0.00046"	"6/74"	"6"	"74"	"356035.628234863"	"HCD"	"MS2"	"2.510052"	"15.4"	"100.000"	"88.6279"	"30885"	"30885"	"30875"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.5"	""	"18.0"	""	"24.1"	""	"21.4"	""	"41.9"	"27.6"	""	"876"	"61"	"36.000"	"29.000"	"3.85011862371927E-05"	""	"0"	"0.002578"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAVLEYLK"	"[R].EDAVLEYLk.[I]"	"K9(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"654.86566"	"1308.72405"	"1308.72485"	"-0.61"	"-0.00040"	"6/74"	"6"	"74"	"387180.352478027"	"HCD"	"MS2"	"3.446912"	"15.8"	"100.000"	"88.6580"	"30900"	"30900"	"30889"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.9"	""	"17.8"	""	"18.7"	""	"27.4"	""	"33.6"	"35.6"	""	"876"	"46"	"36.000"	"29.000"	"0.000987356774922764"	""	"0.0002479"	"0.006085"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAVLEYLK"	"[R].EDAVLEYLk.[I]"	"K9(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"654.86621"	"1308.72515"	"1308.72485"	"0.23"	"0.00015"	"6/74"	"6"	"74"	"400445.777954102"	"HCD"	"MS2"	"51.62962"	"15.8"	"100.000"	"88.3559"	"30781"	"30781"	"30773"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.8"	""	"18.7"	""	"24.1"	""	"24.3"	""	"33.6"	"25.8"	""	"868"	"45"	"36.000"	"29.000"	"0.00139794385541701"	""	"0.0002479"	"0.00566"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAVLEYLK"	"[R].EDAVLEYLk.[I]"	"K9(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.6304"	"0.0000"	"1"	"1"	"1"	"654.86646"	"1308.72563"	"1308.72485"	"0.60"	"0.00039"	"6/74"	"6"	"74"	"426007.796081543"	"HCD"	"MS2"	"43.76787"	"15.2"	"100.000"	"88.3852"	"30796"	"30796"	"30786"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.3"	""	"15.0"	""	"21.9"	""	"26.0"	""	"33.9"	"31.5"	""	"884"	"46"	"36.000"	"29.000"	"0.00105541258704763"	""	"0"	"0.002826"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGMLLNDR"	"[K].mnGmLLNDR.[K]"	"N-Term(TMT6plex); N2(Deamidated); M4(Oxidation)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"655.32654"	"1309.64580"	"1309.64417"	"1.24"	"0.00081"	"7/78"	"7"	"78"	"567988.099182129"	"HCD"	"MS2"	"10.13874"	"39.9"	"100.000"	"57.0265"	"18187"	"18187"	"18163"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.7"	""	"38.1"	""	"56.1"	""	"82.9"	"0.8"	"78.5"	"72.6"	""	"511"	"18"	"34.000"	"27.000"	"0.362569196791563"	"15"	"0.009363"	"0.1219"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVQFEENGR"	"[K].tVQFEEnGR.[K]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"655.33240"	"1309.65752"	"1309.65856"	"-0.80"	"-0.00052"	"7/86"	"7"	"86"	"446633.982727051"	"HCD"	"MS2"	"0"	"36.9"	"100.000"	"43.1143"	"12539"	"12539"	"12515"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.2"	""	"40.4"	""	"49.0"	""	"56.8"	"3.4"	"75.7"	"71.0"	""	"585"	"30"	"34.000"	"27.000"	"0.0316319430754647"	"15"	"0.0002479"	"0.005057"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANILEDSYR"	"[R].aNILEDSYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.5918"	"0.0000"	"1"	"1"	"1"	"655.34955"	"1309.69182"	"1309.69495"	"-2.39"	"-0.00156"	"7/82"	"7"	"82"	"1314018.90258789"	"HCD"	"MS2"	"29.8937"	"80.6"	"100.000"	"61.0731"	"19817"	"19817"	"19794"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"104.7"	""	"76.8"	""	"92.2"	""	"155.9"	""	"175.1"	"166.5"	""	"717"	"49"	"35.000"	"28.000"	"0.000465038768647749"	""	"0"	"0.0008164"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANILEDSYR"	"[R].aNILEDSYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.6136"	"0.0000"	"1"	"1"	"1"	"655.34985"	"1309.69243"	"1309.69495"	"-1.92"	"-0.00126"	"7/82"	"7"	"82"	"955740.502075195"	"HCD"	"MS2"	"34.87474"	"66.8"	"100.000"	"61.1944"	"19851"	"19851"	"19829"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.3"	""	"61.4"	""	"70.1"	""	"127.0"	"0.9"	"135.5"	"148.9"	""	"736"	"44"	"35.000"	"28.000"	"0.00153407933117083"	""	"0"	"0.0005631"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYITGDELR"	"[K].nYITGDELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"655.35046"	"1309.69365"	"1309.69495"	"-0.99"	"-0.00065"	"14/86"	"14"	"86"	"2473018.97216797"	"HCD"	"MS2"	"12.55403"	"116.7"	"100.000"	"55.1472"	"17434"	"17434"	"17416"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"144.7"	""	"128.9"	""	"112.9"	""	"185.9"	""	"259.4"	"279.6"	""	"730"	"45"	"35.000"	"28.000"	"0.00116223209543004"	""	"0"	"0.0003442"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYITGDELR"	"[K].nYITGDELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"655.35083"	"1309.69438"	"1309.69495"	"-0.43"	"-0.00028"	"14/86"	"14"	"86"	"3239571.48748779"	"HCD"	"MS2"	"6.634169"	"152.1"	"100.000"	"55.3798"	"17515"	"17515"	"17495"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"201.7"	""	"159.1"	""	"146.0"	""	"241.7"	""	"337.0"	"365.5"	""	"756"	"45"	"35.000"	"28.000"	"0.00119534095554365"	"28"	"0"	"0.0003946"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYITGDELR"	"[K].nYITGDELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"655.35089"	"1309.69451"	"1309.69495"	"-0.34"	"-0.00022"	"14/86"	"14"	"86"	"5129642.26428223"	"HCD"	"MS2"	"0.3440213"	"234.9"	"100.000"	"55.4538"	"17560"	"17560"	"17543"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"281.8"	""	"240.5"	""	"257.7"	""	"332.1"	""	"555.9"	"572.8"	""	"756"	"45"	"35.000"	"28.000"	"0.00116009031161186"	"26"	"0"	"0.0009651"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYITGDELR"	"[K].nYITGDELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"655.35120"	"1309.69512"	"1309.69495"	"0.13"	"0.00008"	"14/86"	"14"	"86"	"4396197.47729492"	"HCD"	"MS2"	"0"	"201.8"	"100.000"	"55.6723"	"17635"	"17635"	"17618"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"252.9"	""	"204.4"	""	"221.3"	""	"283.3"	""	"451.3"	"512.1"	""	"758"	"47"	"35.000"	"28.000"	"0.000799170068824717"	"28"	"0"	"0.0003793"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGVEAMNK"	"[K].sGVEAmNk.[S]"	"N-Term(TMT6plex); M6(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"655.36102"	"1309.71477"	"1309.71861"	"-2.93"	"-0.00192"	"12/64"	"12"	"64"	"495508.977966309"	"HCD"	"MS2"	"0"	"37.5"	"100.000"	"26.6409"	"5839"	"5839"	"5810"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.2"	""	"41.5"	""	"36.2"	""	"86.5"	""	"64.8"	"65.0"	""	"755"	"25"	"35.000"	"28.000"	"0.122156605490935"	"23"	"0.009302"	"0.1211"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGVEAMNK"	"[K].sGVEAmNk.[S]"	"N-Term(TMT6plex); M6(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"655.36200"	"1309.71672"	"1309.71861"	"-1.44"	"-0.00094"	"7/64"	"7"	"64"	"441254.25213623"	"HCD"	"MS2"	"0"	"33.7"	"100.000"	"26.5233"	"5807"	"5807"	"5780"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.7"	""	"44.6"	""	"37.3"	""	"73.8"	""	"58.5"	"57.8"	""	"771"	"20"	"35.000"	"28.000"	"0.381965714756162"	"21"	"0.009239"	"0.1204"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYTGVNAISK"	"[K].QYTGVNAISk.[K]"	"K10(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.9773"	"0.0000"	"1"	"1"	"1"	"655.36859"	"1309.72991"	"1309.73133"	"-1.09"	"-0.00071"	"7/102"	"7"	"102"	"1343402.7109375"	"HCD"	"MS2"	"20.49195"	"38.3"	"100.000"	"71.1511"	"23912"	"23912"	"23889"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.9"	""	"63.6"	""	"56.3"	""	"60.2"	"0.3"	"55.2"	"64.8"	""	"769"	"44"	"35.000"	"28.000"	"0.00146182822885256"	"16"	"0.001374"	"0.01726"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYTGVNAISK"	"[K].QYTGVNAISk.[K]"	"K10(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"655.36920"	"1309.73113"	"1309.73133"	"-0.16"	"-0.00010"	"6/102"	"6"	"102"	"1167500.76092529"	"HCD"	"MS2"	"44.04448"	"33.7"	"100.000"	"71.2471"	"23938"	"23938"	"23907"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.2"	""	"58.4"	""	"50.8"	""	"41.8"	""	"57.5"	"60.3"	""	"777"	"28"	"35.000"	"28.000"	"0.0684527694030918"	"15"	"0.003581"	"0.03724"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLAGDVHIVR"	"[K].tLAGDVHIVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"437.26392"	"1309.77719"	"1309.77895"	"-1.34"	"-0.00059"	"9/80"	"9"	"80"	"2528761.07147217"	"HCD"	"MS2"	"36.68235"	"86.3"	"100.000"	"48.2801"	"14637"	"14637"	"14610"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"117.4"	""	"110.5"	""	"131.0"	""	"132.0"	""	"151.9"	"175.9"	""	"544"	"36"	"34.000"	"27.000"	"0.00664613110332761"	"15"	"0"	"0.0007497"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLAGDVHIVR"	"[K].tLAGDVHIVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"437.26413"	"1309.77784"	"1309.77895"	"-0.85"	"-0.00037"	"11/80"	"11"	"80"	"2386636.81933594"	"HCD"	"MS2"	"36.72927"	"80.5"	"100.000"	"48.6729"	"14784"	"14784"	"14764"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"110.8"	""	"107.0"	""	"125.2"	""	"121.7"	""	"146.5"	"151.7"	""	"507"	"34"	"34.000"	"27.000"	"0.00933206948183816"	"15"	"0"	"0.001061"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAMGQGFDR"	"[K].eAAMGQGFDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"655.82166"	"1310.63603"	"1310.63605"	"-0.01"	"-0.00001"	"8/96"	"8"	"96"	"646837.425415039"	"HCD"	"MS2"	"20.89581"	"39.9"	"100.000"	"42.4153"	"12243"	"12243"	"12217"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.4"	""	"51.6"	""	"62.3"	""	"47.8"	""	"76.4"	"73.7"	""	"438"	"22"	"33.000"	"26.000"	"0.146704729462219"	"17"	"0.0002479"	"0.005239"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAMGQGFDR"	"[K].eAAMGQGFDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"655.82202"	"1310.63677"	"1310.63605"	"0.55"	"0.00036"	"8/96"	"8"	"96"	"636357.445068359"	"HCD"	"MS2"	"26.57803"	"41.8"	"100.000"	"42.2908"	"12203"	"12203"	"12172"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"76.5"	""	"56.4"	""	"56.3"	""	"51.3"	""	"77.7"	"80.4"	""	"445"	"24"	"33.000"	"26.000"	"0.0966785248781746"	"18"	"0.0001301"	"0.003887"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEEQVK"	"[K].yGEEQVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZYR1"	"F-BAR domain only protein 2 OS=Rattus norvegicus OX=10116 GN=Fcho2 PE=1 SV=1"	"D3ZYR1"	"F-BAR domain only protein 2 OS=Rattus norvegicus OX=10116 GN=Fcho2 PE=1 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"655.86993"	"1310.73259"	"1310.73564"	"-2.32"	"-0.00152"	"6/54"	"6"	"54"	"1047529.17370605"	"HCD"	"MS2"	"30.76401"	"92.8"	"100.000"	"39.1819"	"10928"	"10928"	"10899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"151.9"	""	"99.0"	""	"108.6"	""	"170.5"	""	"179.7"	"170.6"	""	"716"	"31"	"35.000"	"28.000"	"0.0313244191531422"	"25"	"0.002937"	"0.02739"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEEQVK"	"[K].yGEEQVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZYR1"	"F-BAR domain only protein 2 OS=Rattus norvegicus OX=10116 GN=Fcho2 PE=1 SV=1"	"D3ZYR1"	"F-BAR domain only protein 2 OS=Rattus norvegicus OX=10116 GN=Fcho2 PE=1 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"655.87067"	"1310.73406"	"1310.73564"	"-1.21"	"-0.00079"	"6/54"	"6"	"54"	"1249660.30065918"	"HCD"	"MS2"	"13.34333"	"121.3"	"100.000"	"39.0087"	"10866"	"10866"	"10844"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"170.9"	""	"147.3"	""	"145.2"	""	"210.5"	"1.3"	"234.5"	"240.6"	""	"711"	"31"	"35.000"	"28.000"	"0.0303277090533253"	"25"	"0.003449"	"0.0339"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YETSGIGEAR"	"[K].yETSGIGEAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P61765"	"Syntaxin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Stxbp1 PE=1 SV=1"	"P61765"	"Syntaxin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Stxbp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.34058"	"1311.67388"	"1311.67421"	"-0.26"	"-0.00017"	"8/84"	"8"	"84"	"708083.209289551"	"HCD"	"MS2"	"0"	"52.0"	"100.000"	"38.3886"	"10605"	"10605"	"10578"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"79.4"	""	"76.0"	""	"80.0"	""	"66.4"	"0.2"	"100.0"	"90.4"	""	"662"	"41"	"35.000"	"28.000"	"0.00259315211755616"	"15"	"0"	"0.0004531"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YETSGIGEAR"	"[K].yETSGIGEAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P61765"	"Syntaxin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Stxbp1 PE=1 SV=1"	"P61765"	"Syntaxin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Stxbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"656.34076"	"1311.67424"	"1311.67421"	"0.02"	"0.00002"	"9/84"	"9"	"84"	"614831.248413086"	"HCD"	"MS2"	"25.83256"	"48.9"	"100.000"	"38.1532"	"10517"	"10517"	"10490"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.4"	""	"56.2"	""	"66.0"	""	"73.7"	"1.4"	"91.8"	"100.3"	""	"666"	"36"	"35.000"	"28.000"	"0.00798811362033489"	"16"	"0"	"0.0002238"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MASSSGEGK"	"[K].mASSSGEGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"656.35205"	"1311.69682"	"1311.69787"	"-0.80"	"-0.00052"	"13/72"	"13"	"72"	"1589568.57171631"	"HCD"	"MS2"	"9.390533"	"128.9"	"100.000"	"27.7717"	"6313"	"6313"	"6295"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"217.0"	""	"183.6"	""	"187.8"	""	"141.1"	"0.4"	"240.1"	"251.0"	""	"757"	"48"	"35.000"	"28.000"	"0.000671530718516928"	"25"	"0"	"0.0003476"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MASSSGEGK"	"[K].mASSSGEGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"656.35217"	"1311.69707"	"1311.69787"	"-0.61"	"-0.00040"	"8/72"	"8"	"72"	"1637522.86108398"	"HCD"	"MS2"	"0"	"129.7"	"100.000"	"27.8730"	"6340"	"6340"	"6310"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"223.6"	""	"187.3"	""	"186.3"	""	"139.8"	""	"243.3"	"250.4"	""	"757"	"47"	"35.000"	"28.000"	"0.000816706258864285"	"21"	"0"	"0.000348"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTLYVGTTR"	"[R].gDTLYVGTTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.5143"	"0.0000"	"1"	"1"	"1"	"656.35779"	"1311.70830"	"1311.71060"	"-1.75"	"-0.00115"	"7/86"	"7"	"86"	"952628.075866699"	"HCD"	"MS2"	"0"	"54.2"	"100.000"	"46.3566"	"13854"	"13854"	"13833"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"82.2"	""	"79.4"	""	"84.4"	""	"78.3"	""	"99.4"	"92.3"	""	"732"	"35"	"35.000"	"28.000"	"0.0104587813887523"	""	"0"	"0.0002227"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTLYVGTTR"	"[R].gDTLYVGTTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"656.35815"	"1311.70903"	"1311.71060"	"-1.19"	"-0.00078"	"7/86"	"7"	"86"	"1317621.02355957"	"HCD"	"MS2"	"0"	"73.5"	"100.000"	"46.5014"	"13901"	"13901"	"13884"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"101.8"	""	"107.7"	""	"112.2"	""	"95.3"	""	"137.2"	"143.7"	""	"729"	"35"	"35.000"	"28.000"	"0.0116063999666917"	"27"	"0"	"9.038E-05"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTLYVGTTR"	"[R].gDTLYVGTTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"656.35846"	"1311.70964"	"1311.71060"	"-0.73"	"-0.00048"	"8/86"	"8"	"86"	"4646122.61383057"	"HCD"	"MS2"	"0"	"213.8"	"100.000"	"46.1932"	"13775"	"13775"	"13757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"321.6"	""	"359.3"	""	"374.7"	""	"278.9"	""	"349.2"	"338.7"	""	"731"	"45"	"35.000"	"28.000"	"0.00111144347688468"	""	"0"	"0.0001371"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTLYVGTTR"	"[R].gDTLYVGTTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.6591"	"0.0000"	"1"	"1"	"1"	"656.35876"	"1311.71025"	"1311.71060"	"-0.26"	"-0.00017"	"8/86"	"8"	"86"	"4974083.82189941"	"HCD"	"MS2"	"0"	"219.0"	"100.000"	"46.0391"	"13724"	"13724"	"13705"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"343.2"	""	"362.0"	""	"387.0"	""	"281.0"	"1.5"	"345.7"	"349.1"	""	"722"	"44"	"35.000"	"28.000"	"0.00150489847432791"	""	"0"	"8.067E-05"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEGYDK"	"[R].eLEGYDk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"656.36359"	"1311.71990"	"1311.71965"	"0.19"	"0.00012"	"6/58"	"6"	"58"	"1749034.6427002"	"HCD"	"MS2"	"19.47991"	"136.1"	"100.000"	"50.2604"	"15444"	"15444"	"15424"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"182.7"	""	"164.7"	""	"175.1"	""	"211.8"	""	"282.6"	"277.7"	""	"681"	"28"	"35.000"	"28.000"	"0.052253708264316"	"25"	"0.003507"	"0.03592"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEGYDK"	"[R].eLEGYDk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"656.36414"	"1311.72099"	"1311.71965"	"1.02"	"0.00067"	"6/58"	"6"	"58"	"1341892.05133057"	"HCD"	"MS2"	"42.49205"	"112.5"	"100.000"	"50.5697"	"15559"	"15559"	"15534"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"144.6"	""	"152.9"	""	"145.3"	""	"162.1"	""	"220.2"	"244.4"	""	"700"	"28"	"35.000"	"28.000"	"0.0574206420619839"	"21"	"0.003449"	"0.03256"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"656.38086"	"1311.75444"	"1311.75604"	"-1.22"	"-0.00080"	"6/56"	"6"	"56"	"1476647.42810059"	"HCD"	"MS2"	"55.25721"	"104.5"	"100.000"	"55.1104"	"17419"	"17419"	"17400"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"181.0"	""	"163.7"	""	"147.2"	""	"123.1"	"0.3"	"196.4"	"177.3"	""	"604"	"20"	"34.000"	"27.000"	"0.330374822614173"	"15"	"0.004942"	"0.05525"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"656.38086"	"1311.75444"	"1311.75604"	"-1.22"	"-0.00080"	"6/56"	"6"	"56"	"1625974.22009277"	"HCD"	"MS2"	"59.58841"	"115.9"	"100.000"	"55.3357"	"17497"	"17497"	"17479"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"182.4"	""	"180.6"	""	"176.6"	""	"143.1"	""	"214.3"	"199.7"	""	"604"	"20"	"34.000"	"27.000"	"0.314779863676778"	"19"	"0.005119"	"0.0579"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"437.92307"	"1311.75464"	"1311.75604"	"-1.06"	"-0.00047"	"5/56"	"5"	"56"	"10946549.3193359"	"HCD"	"MS2"	"13.73217"	"454.9"	"96.719"	"54.5230"	"17180"	"17180"	"17161"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"778.5"	""	"743.4"	""	"659.9"	""	"624.9"	""	"788.8"	"709.0"	""	"604"	"30"	"34.000"	"27.000"	"0.0299231247357616"	"22"	"0.003717"	"0.03844"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"437.92310"	"1311.75473"	"1311.75604"	"-0.99"	"-0.00043"	"7/56"	"7"	"56"	"9633632.44110107"	"HCD"	"MS2"	"15.28619"	"434.7"	"100.000"	"54.7716"	"17268"	"17268"	"17248"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"745.1"	""	"700.7"	""	"634.5"	""	"583.0"	""	"769.6"	"681.6"	""	"604"	"30"	"34.000"	"27.000"	"0.0281194578391285"	"25"	"0.005309"	"0.06026"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYETVVK"	"[R].dYETVVk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P53042"	"Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus OX=10116 GN=Ppp5c PE=1 SV=1"	"P53042"	"Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus OX=10116 GN=Ppp5c PE=1 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"656.38104"	"1311.75481"	"1311.75604"	"-0.94"	"-0.00062"	"6/54"	"6"	"54"	"2379221.99664307"	"HCD"	"MS2"	"17.00895"	"206.4"	"100.000"	"54.2052"	"17053"	"17053"	"17033"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"310.2"	""	"266.4"	""	"269.1"	""	"301.9"	""	"396.3"	"413.9"	""	"604"	"34"	"34.000"	"27.000"	"0.0119126105226734"	"25"	"0.002973"	"0.02935"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"656.38116"	"1311.75505"	"1311.75604"	"-0.75"	"-0.00049"	"6/56"	"6"	"56"	"65824386.9938965"	"HCD"	"MS2"	"0"	"1065.8"	"20.647"	"54.5163"	"17178"	"17178"	"17161"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1878.8"	""	"1751.0"	""	"1566.1"	""	"1371.0"	""	"1826.9"	"1684.3"	""	"604"	"31"	"34.000"	"27.000"	"0.0231210175287199"	"20"	"0.008668"	"0.1089"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"656.38129"	"1311.75530"	"1311.75604"	"-0.57"	"-0.00037"	"6/56"	"6"	"56"	"6388137.55535889"	"HCD"	"MS2"	"2.61582"	"511.9"	"100.000"	"55.0303"	"17372"	"17372"	"17361"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"841.6"	""	"838.3"	""	"758.6"	""	"627.2"	""	"941.8"	"838.9"	""	"604"	"33"	"34.000"	"27.000"	"0.0169827080207486"	"23"	"0.003967"	"0.04156"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYETVVK"	"[R].dYETVVk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P53042"	"Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus OX=10116 GN=Ppp5c PE=1 SV=1"	"P53042"	"Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus OX=10116 GN=Ppp5c PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"656.38135"	"1311.75542"	"1311.75604"	"-0.47"	"-0.00031"	"6/54"	"6"	"54"	"2300838.75866699"	"HCD"	"MS2"	"16.82895"	"204.1"	"100.000"	"54.4623"	"17143"	"17143"	"17120"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"302.1"	""	"257.0"	""	"272.2"	""	"292.5"	""	"382.8"	"432.5"	""	"572"	"36"	"34.000"	"27.000"	"0.00741935297565981"	"25"	"0.002467"	"0.02495"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"656.38135"	"1311.75542"	"1311.75604"	"-0.47"	"-0.00031"	"6/56"	"6"	"56"	"74535517.4313965"	"HCD"	"MS2"	"0"	"1269.2"	"21.493"	"54.7623"	"17265"	"17265"	"17248"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2237.1"	""	"2108.5"	""	"1843.0"	""	"1619.3"	"0.4"	"2228.9"	"1962.1"	""	"572"	"34"	"34.000"	"27.000"	"0.0118131585569186"	"20"	"0.005369"	"0.06138"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"656.38153"	"1311.75578"	"1311.75604"	"-0.19"	"-0.00013"	"6/56"	"6"	"56"	"5482603.38262939"	"HCD"	"MS2"	"2.572437"	"440.7"	"100.000"	"54.8189"	"17301"	"17301"	"17284"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"714.0"	""	"732.2"	""	"634.2"	""	"561.7"	""	"791.5"	"741.9"	""	"558"	"32"	"34.000"	"27.000"	"0.0165045695934957"	"20"	"0.004069"	"0.04385"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMPHDLAR"	"[K].dLmPHDLAR.[A]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"438.23328"	"1312.68528"	"1312.68809"	"-2.14"	"-0.00094"	"6/74"	"6"	"74"	"4013424.12884521"	"HCD"	"MS2"	"19.85047"	"116.6"	"100.000"	"36.0242"	"9651"	"9651"	"9627"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"141.0"	""	"123.1"	""	"138.0"	""	"254.1"	""	"234.5"	"217.7"	""	"622"	"42"	"34.000"	"27.000"	"0.00218655491483872"	"27"	"0"	"0.002131"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMPHDLAR"	"[K].dLmPHDLAR.[A]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"438.23340"	"1312.68564"	"1312.68809"	"-1.86"	"-0.00081"	"7/74"	"7"	"74"	"4464675.7611084"	"HCD"	"MS2"	"14.07437"	"114.9"	"100.000"	"35.9285"	"9617"	"9617"	"9594"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"139.6"	""	"126.9"	""	"135.3"	""	"252.9"	""	"216.6"	"226.7"	""	"622"	"37"	"34.000"	"27.000"	"0.0061342347093172"	"23"	"0"	"0.003036"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTTGSYIANR"	"[R].tTTGSYIANR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"656.85559"	"1312.70391"	"1312.70585"	"-1.48"	"-0.00097"	"8/82"	"8"	"82"	"2139985.13189697"	"HCD"	"MS2"	"3.218082"	"108.1"	"100.000"	"32.6600"	"8294"	"8294"	"8275"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"179.4"	""	"130.1"	""	"163.7"	""	"166.0"	"1.2"	"187.9"	"195.1"	""	"611"	"60"	"34.000"	"27.000"	"3.09749928342556E-05"	"20"	"0"	"2.352E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTTGSYIANR"	"[R].tTTGSYIANR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"656.85583"	"1312.70439"	"1312.70585"	"-1.11"	"-0.00073"	"8/82"	"8"	"82"	"1643615.33410645"	"HCD"	"MS2"	"0"	"89.8"	"100.000"	"32.6558"	"8286"	"8286"	"8259"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"153.6"	""	"100.2"	""	"118.6"	""	"138.8"	""	"170.6"	"170.0"	""	"616"	"58"	"34.000"	"27.000"	"5.05301650145458E-05"	"18"	"0"	"4.153E-05"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVPEGSPVSR"	"[K].vGVPEGSPVSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"656.87354"	"1312.73979"	"1312.74223"	"-1.86"	"-0.00122"	"7/90"	"7"	"90"	"1194198.15118408"	"HCD"	"MS2"	"0"	"50.3"	"100.000"	"46.7394"	"14008"	"14008"	"13983"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.9"	""	"65.9"	""	"70.3"	""	"88.2"	""	"99.5"	"94.2"	""	"561"	"43"	"34.000"	"27.000"	"0.00137699659260805"	"19"	"0.0003538"	"0.00633"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVPEGSPVSR"	"[K].vGVPEGSPVSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"656.87390"	"1312.74053"	"1312.74223"	"-1.30"	"-0.00085"	"7/90"	"7"	"90"	"983748.879150391"	"HCD"	"MS2"	"0"	"42.4"	"100.000"	"46.9689"	"14090"	"14090"	"14067"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.2"	""	"57.6"	""	"59.5"	""	"71.1"	"0.6"	"82.9"	"78.7"	""	"566"	"34"	"34.000"	"27.000"	"0.0122401414182907"	"18"	"0.001374"	"0.01615"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVPEGSPVSR"	"[K].vGVPEGSPVSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.87433"	"1312.74138"	"1312.74223"	"-0.65"	"-0.00042"	"6/90"	"6"	"90"	"480215.733886719"	"HCD"	"MS2"	"28.49875"	"29.6"	"100.000"	"47.2795"	"14217"	"14217"	"14193"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.9"	""	"37.8"	""	"30.6"	""	"49.6"	"1.6"	"61.2"	"64.5"	""	"562"	"17"	"34.000"	"27.000"	"0.598007071921142"	"14"	"0.003111"	"0.0316"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEEEHK"	"[R].lAEEEHk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"438.58655"	"1313.74509"	"1313.74654"	"-1.10"	"-0.00048"	"6/52"	"6"	"52"	"5206226.06097412"	"HCD"	"MS2"	"61.8326"	"259.3"	"100.000"	"29.4336"	"6987"	"6987"	"6971"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"361.7"	""	"272.6"	""	"324.8"	""	"500.9"	""	"508.6"	"491.5"	""	"642"	"35"	"35.000"	"28.000"	"0.0100810329073427"	""	"0.005001"	"0.05663"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEEEHK"	"[R].lAEEEHk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"0"	"3"	"3"	"0.3448"	"0.0000"	"1"	"1"	"1"	"438.58698"	"1313.74637"	"1313.74654"	"-0.13"	"-0.00005"	"7/52"	"7"	"52"	"5781092.48260498"	"HCD"	"MS2"	"27.6484"	"288.4"	"100.000"	"29.5009"	"7002"	"7002"	"6985"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"426.2"	""	"307.4"	""	"357.1"	""	"523.5"	""	"563.9"	"561.1"	""	"631"	"29"	"34.000"	"28.000"	"0.0402716444179979"	""	"0.002973"	"0.02819"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPQEK"	"[R].sAVPPQEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"657.39563"	"1313.78398"	"1313.78292"	"0.81"	"0.00053"	"6/72"	"6"	"72"	"456677.425109863"	"HCD"	"MS2"	"25.07001"	"33.2"	"100.000"	"33.6316"	"8688"	"8688"	"8669"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.3"	""	"39.7"	""	"48.1"	""	"63.6"	""	"66.2"	"59.4"	""	"483"	"20"	"33.000"	"26.000"	"0.248265935997543"	""	"0.00447"	"0.04776"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPQEK"	"[R].sAVPPQEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.2917"	"0.0000"	"1"	"1"	"1"	"657.39587"	"1313.78447"	"1313.78292"	"1.18"	"0.00077"	"6/72"	"6"	"72"	"449902.505065918"	"HCD"	"MS2"	"0"	"34.5"	"100.000"	"33.6777"	"8700"	"8700"	"8677"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.3"	""	"41.1"	""	"50.1"	""	"64.4"	""	"73.4"	"63.1"	""	"476"	"24"	"33.000"	"26.000"	"0.0862138336231743"	""	"0.002056"	"0.02258"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQIYDVYR"	"[K].eQIYDVYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3B8Q2"	"Eukaryotic initiation factor 4A-III OS=Rattus norvegicus OX=10116 GN=Eif4a3 PE=1 SV=1"	"Q3B8Q2"	"Eukaryotic initiation factor 4A-III OS=Rattus norvegicus OX=10116 GN=Eif4a3 PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"657.84778"	"1314.68828"	"1314.68913"	"-0.65"	"-0.00043"	"7/76"	"7"	"76"	"1119075.75024414"	"HCD"	"MS2"	"0"	"59.2"	"100.000"	"59.9753"	"19379"	"19379"	"19373"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"86.6"	""	"66.0"	""	"56.0"	""	"112.4"	""	"124.0"	"120.9"	""	"635"	"34"	"35.000"	"28.000"	"0.0121267305991715"	"21"	"0.0002479"	"0.005375"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPNASEPK"	"[K].nPNASEPk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"657.87372"	"1314.74016"	"1314.74179"	"-1.24"	"-0.00081"	"7/72"	"7"	"72"	"1229758.31402588"	"HCD"	"MS2"	"0"	"82.0"	"100.000"	"26.0966"	"5634"	"5634"	"5622"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.1"	""	"93.4"	""	"97.8"	""	"138.9"	""	"174.9"	"178.9"	""	"624"	"34"	"34.000"	"27.000"	"0.0129167898543756"	"18"	"0.0003538"	"0.006879"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPNASEPK"	"[K].nPNASEPk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"657.87396"	"1314.74065"	"1314.74179"	"-0.87"	"-0.00057"	"7/72"	"7"	"72"	"1359289.8684082"	"HCD"	"MS2"	"0"	"89.0"	"100.000"	"26.1774"	"5651"	"5651"	"5640"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"95.9"	""	"102.2"	""	"113.5"	""	"149.8"	""	"197.8"	"189.1"	""	"609"	"39"	"34.000"	"27.000"	"0.00360236153718313"	"18"	"0.0001301"	"0.004756"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPNASEPK"	"[K].nPNASEPk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"657.87457"	"1314.74187"	"1314.74179"	"0.06"	"0.00004"	"7/72"	"7"	"72"	"1578364.57904053"	"HCD"	"MS2"	"0"	"101.8"	"100.000"	"25.9066"	"5543"	"5543"	"5513"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"116.2"	""	"122.5"	""	"130.1"	""	"178.0"	""	"212.0"	"208.7"	""	"596"	"37"	"34.000"	"27.000"	"0.00569136271052739"	"19"	"0"	"0.003237"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPNASEPK"	"[K].nPNASEPk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"657.87500"	"1314.74272"	"1314.74179"	"0.71"	"0.00047"	"7/72"	"7"	"72"	"2105344.284729"	"HCD"	"MS2"	"0"	"139.4"	"100.000"	"25.8237"	"5524"	"5524"	"5496"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"162.6"	""	"173.8"	""	"164.7"	""	"247.1"	""	"291.5"	"294.6"	""	"587"	"36"	"34.000"	"27.000"	"0.00692800361438499"	"19"	"0"	"0.003293"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMMAACDPR"	"[K].nmmAAcDPR.[H]"	"N-Term(TMT6plex); M2(Oxidation); M3(Oxidation); C6(Methylthio)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"658.27625"	"1315.54521"	"1315.54645"	"-0.94"	"-0.00062"	"7/80"	"7"	"80"	"519779.443908691"	"HCD"	"MS2"	"24.54987"	"29.4"	"100.000"	"31.0820"	"7643"	"7643"	"7620"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.3"	""	"24.8"	""	"29.3"	""	"77.5"	"0.9"	"62.6"	"55.2"	""	"91"	"23"	"26.000"	"19.000"	"0.0229620890391406"	"14"	"0.004867"	"0.05248"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMMAACDPR"	"[K].nmmAAcDPR.[H]"	"N-Term(TMT6plex); M2(Oxidation); M3(Oxidation); C6(Methylthio)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"658.27649"	"1315.54570"	"1315.54645"	"-0.57"	"-0.00037"	"7/80"	"7"	"80"	"534287.933898926"	"HCD"	"MS2"	"0"	"32.4"	"100.000"	"31.0036"	"7622"	"7622"	"7606"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.4"	""	"26.9"	""	"27.3"	""	"85.3"	""	"73.1"	"66.4"	""	"93"	"32"	"26.000"	"19.000"	"0.00278902850458812"	"15"	"0.003507"	"0.03665"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVAQPAENR"	"[R].aMVAQPAENR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"658.35205"	"1315.69682"	"1315.69899"	"-1.64"	"-0.00108"	"7/82"	"7"	"82"	"870993.100280762"	"HCD"	"MS2"	"0"	"48.6"	"100.000"	"31.6638"	"7881"	"7881"	"7853"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"89.2"	""	"68.1"	""	"69.3"	""	"56.7"	"0.4"	"90.4"	"86.1"	""	"699"	"39"	"35.000"	"28.000"	"0.00420191419898785"	"19"	"0"	"0.001282"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVAQPAENR"	"[R].aMVAQPAENR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"658.35211"	"1315.69695"	"1315.69899"	"-1.55"	"-0.00102"	"9/82"	"9"	"82"	"1314282.84112549"	"HCD"	"MS2"	"0"	"70.5"	"100.000"	"31.6702"	"7893"	"7893"	"7868"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"132.7"	""	"96.7"	""	"111.5"	""	"74.3"	"3.7"	"123.6"	"124.3"	""	"699"	"34"	"35.000"	"28.000"	"0.0132570587248302"	"19"	"0"	"0.002298"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEGVPTLWR"	"[R].eEGVPTLWR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"658.36346"	"1315.71965"	"1315.72077"	"-0.85"	"-0.00056"	"7/74"	"7"	"74"	"678651.28515625"	"HCD"	"MS2"	"7.25055"	"33.5"	"100.000"	"78.8587"	"27024"	"27024"	"27010"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.7"	""	"45.1"	""	"45.5"	""	"54.1"	""	"63.6"	"71.8"	""	"732"	"43"	"35.000"	"28.000"	"0.00163863069328548"	"27"	"0"	"0.002167"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEGVPTLWR"	"[R].eEGVPTLWR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"658.36414"	"1315.72099"	"1315.72077"	"0.17"	"0.00011"	"6/74"	"6"	"74"	"466258.933227539"	"HCD"	"MS2"	"6.194097"	"23.1"	"100.000"	"78.9491"	"27056"	"27056"	"27039"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.2"	""	"26.3"	""	"30.1"	""	"37.4"	"0.7"	"42.6"	"49.7"	""	"727"	"25"	"35.000"	"28.000"	"0.110028303111482"	"22"	"0.009021"	"0.1164"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEGVPTLWR"	"[R].eEGVPTLWR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"658.36469"	"1315.72209"	"1315.72077"	"1.01"	"0.00066"	"6/74"	"6"	"74"	"1113126.55334473"	"HCD"	"MS2"	"0"	"44.8"	"100.000"	"78.5567"	"26903"	"26903"	"26889"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.9"	""	"62.3"	""	"60.8"	""	"70.6"	""	"79.7"	"93.5"	""	"732"	"26"	"35.000"	"28.000"	"0.0900494543118031"	"18"	"0.0008629"	"0.01013"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEGVPTLWR"	"[R].eEGVPTLWR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"658.36481"	"1315.72234"	"1315.72077"	"1.19"	"0.00079"	"6/74"	"6"	"74"	"1178561.19799805"	"HCD"	"MS2"	"0"	"48.7"	"100.000"	"78.5891"	"26911"	"26911"	"26900"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.4"	""	"66.8"	""	"66.8"	""	"74.6"	""	"91.8"	"99.2"	""	"735"	"26"	"35.000"	"28.000"	"0.102154462590154"	"21"	"0"	"0.001951"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELDNMPLR"	"[K].vELDNMPLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"658.36597"	"1315.72466"	"1315.72414"	"0.39"	"0.00026"	"7/76"	"7"	"76"	"755081.20098877"	"HCD"	"MS2"	"36.72969"	"42.5"	"100.000"	"78.1439"	"26731"	"26731"	"26713"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.4"	""	"57.7"	""	"52.0"	""	"61.9"	""	"78.9"	"79.5"	""	"683"	"14"	"35.000"	"28.000"	"1.26879280736684"	"18"	"0.000936"	"0.01207"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELDNMPLR"	"[K].vELDNMPLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"658.36646"	"1315.72563"	"1315.72414"	"1.14"	"0.00075"	"6/76"	"6"	"76"	"836302.551391602"	"HCD"	"MS2"	"32.82283"	"40.5"	"100.000"	"78.0922"	"26718"	"26718"	"26702"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.1"	""	"54.7"	""	"51.6"	""	"57.2"	""	"81.0"	"75.3"	""	"669"	"15"	"35.000"	"28.000"	"0.971395577918359"	"19"	"0.001635"	"0.01973"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALEPGQK"	"[K].dALEPGQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"3"	"658.38422"	"1315.76116"	"1315.76219"	"-0.78"	"-0.00052"	"10/64"	"10"	"64"	"8293177.59448242"	"HCD"	"MS2"	"10.65261"	"540.3"	"100.000"	"41.4262"	"11849"	"11849"	"11828"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"877.2"	""	"697.4"	""	"705.5"	""	"986.8"	""	"915.8"	"932.7"	""	"714"	"29"	"35.000"	"28.000"	"0.0434178402230754"	"23"	"0.0023"	"0.02363"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPQDGAK"	"[K].lEPQDGAk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6UPR8"	"Endoplasmic reticulum metallopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Ermp1 PE=1 SV=1"	"Q6UPR8"	"Endoplasmic reticulum metallopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Ermp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"658.38434"	"1315.76140"	"1315.76219"	"-0.60"	"-0.00039"	"6/70"	"6"	"70"	"710181.363830566"	"HCD"	"MS2"	"0"	"63.0"	"100.000"	"41.1768"	"11739"	"11739"	"11713"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"77.3"	""	"67.1"	""	"73.0"	""	"113.7"	"0.0"	"127.9"	"139.6"	""	"714"	"32"	"35.000"	"28.000"	"0.0218609089845744"	"27"	"0.005921"	"0.06786"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALEPGQK"	"[K].dALEPGQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"3"	"658.38434"	"1315.76140"	"1315.76219"	"-0.60"	"-0.00039"	"10/64"	"10"	"64"	"6272991.05450439"	"HCD"	"MS2"	"0"	"446.1"	"100.000"	"41.7206"	"11970"	"11970"	"11953"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"696.3"	""	"563.5"	""	"583.5"	""	"761.6"	""	"773.7"	"854.5"	""	"714"	"27"	"35.000"	"28.000"	"0.0640719904779212"	"23"	"0.002937"	"0.02775"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALEPGQK"	"[K].dALEPGQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"439.25876"	"1315.76172"	"1315.76219"	"-0.35"	"-0.00015"	"6/64"	"6"	"64"	"5238757.26721191"	"HCD"	"MS2"	"10.63955"	"185.6"	"100.000"	"41.6192"	"11928"	"11928"	"11905"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"283.4"	""	"224.6"	""	"236.9"	""	"321.5"	""	"337.5"	"358.3"	""	"698"	"35"	"35.000"	"28.000"	"0.0109100169912626"	"21"	"0.004069"	"0.04409"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALEPGQK"	"[K].dALEPGQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"3"	"658.38452"	"1315.76177"	"1315.76219"	"-0.32"	"-0.00021"	"6/64"	"6"	"64"	"4650639.8347168"	"HCD"	"MS2"	"20.65764"	"317.9"	"100.000"	"41.5439"	"11887"	"11887"	"11874"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"513.5"	""	"421.1"	""	"408.2"	""	"583.4"	"1.9"	"556.7"	"523.1"	""	"698"	"23"	"35.000"	"28.000"	"0.159891518463372"	"28"	"0.001886"	"0.02163"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPQDGAK"	"[K].lEPQDGAk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6UPR8"	"Endoplasmic reticulum metallopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Ermp1 PE=1 SV=1"	"Q6UPR8"	"Endoplasmic reticulum metallopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Ermp1 PE=1 SV=1"	"0"	"2"	"2"	"0.5517"	"0.0000"	"1"	"1"	"1"	"658.38458"	"1315.76189"	"1315.76219"	"-0.23"	"-0.00015"	"6/70"	"6"	"70"	"750672.940002441"	"HCD"	"MS2"	"0"	"60.5"	"100.000"	"40.9558"	"11659"	"11659"	"11633"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"77.0"	""	"71.4"	""	"64.0"	""	"123.2"	""	"123.1"	"115.5"	""	"698"	"29"	"35.000"	"28.000"	"0.0453759182733618"	"27"	"0.004942"	"0.05356"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALEPGQK"	"[K].dALEPGQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"439.25891"	"1315.76218"	"1315.76219"	"-0.01"	"0.00000"	"6/64"	"6"	"64"	"6001373.19470215"	"HCD"	"MS2"	"6.322119"	"212.0"	"100.000"	"41.7623"	"11976"	"11976"	"11954"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"289.2"	""	"266.8"	""	"294.3"	""	"364.2"	""	"398.1"	"401.7"	""	"698"	"34"	"35.000"	"28.000"	"0.0152344025451818"	"20"	"0.005369"	"0.06144"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALEPGQK"	"[K].dALEPGQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"3"	"658.38477"	"1315.76225"	"1315.76219"	"0.05"	"0.00003"	"5/64"	"5"	"64"	"8731335.68054199"	"HCD"	"MS2"	"0"	"579.6"	"100.000"	"41.8244"	"12002"	"12002"	"11986"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"881.9"	""	"690.0"	""	"787.0"	""	"1003.6"	""	"1035.7"	"1098.1"	""	"698"	"22"	"35.000"	"28.000"	"0.233252027231446"	"23"	"0.002056"	"0.02217"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDELVTLR"	"[R].lQDELVTLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"658.39227"	"1315.77727"	"1315.77828"	"-0.77"	"-0.00051"	"7/86"	"7"	"86"	"585012.623168945"	"HCD"	"MS2"	"51.95206"	"32.0"	"100.000"	"84.2227"	"29165"	"29165"	"29147"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.2"	""	"37.4"	""	"63.0"	""	"57.4"	"0.7"	"44.9"	"63.8"	""	"741"	"26"	"35.000"	"28.000"	"0.0915773795728477"	"28"	"0"	"0.001141"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDELVTLR"	"[R].lQDELVTLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"658.39240"	"1315.77751"	"1315.77828"	"-0.58"	"-0.00038"	"7/86"	"7"	"86"	"406265.331604004"	"HCD"	"MS2"	"36.07284"	"15.2"	"100.000"	"84.5657"	"29300"	"29300"	"29284"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.2"	""	"15.2"	""	"36.7"	""	"24.5"	"0.5"	"22.0"	"28.6"	""	"741"	"23"	"35.000"	"28.000"	"0.18398745509735"	"25"	"0.001134"	"0.01397"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDELVTLR"	"[R].lQDELVTLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.4889"	"0.0000"	"1"	"1"	"1"	"658.39276"	"1315.77825"	"1315.77828"	"-0.03"	"-0.00002"	"7/86"	"7"	"86"	"428424.69732666"	"HCD"	"MS2"	"28.64672"	"22.4"	"100.000"	"84.4914"	"29273"	"29273"	"29261"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.5"	""	"22.2"	""	"48.2"	""	"41.0"	"5.3"	"32.0"	"41.8"	""	"737"	"45"	"35.000"	"28.000"	"0.00127478660728926"	""	"0"	"0.001208"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDELVTLR"	"[R].lQDELVTLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"658.39301"	"1315.77873"	"1315.77828"	"0.34"	"0.00023"	"6/86"	"6"	"86"	"619373.016845703"	"HCD"	"MS2"	"36.13309"	"32.0"	"100.000"	"84.2510"	"29176"	"29176"	"29159"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.7"	""	"34.9"	""	"55.6"	""	"60.2"	"1.0"	"47.5"	"64.9"	""	"763"	"31"	"35.000"	"28.000"	"0.0321732210087071"	"28"	"0"	"0.001192"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSDFDCELR"	"[K].gSDFDcELR.[L]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"658.79370"	"1316.58013"	"1316.58124"	"-0.85"	"-0.00056"	"10/74"	"10"	"74"	"468563.825073242"	"HCD"	"MS2"	"12.63918"	"29.2"	"100.000"	"75.8910"	"25829"	"25829"	"25808"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.3"	""	"35.1"	""	"33.2"	""	"45.0"	""	"58.0"	"62.4"	""	"143"	"21"	"28.000"	"21.000"	"0.0611372699712549"	"17"	"0"	"0.003726"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSDFDCELR"	"[K].gSDFDcELR.[L]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"658.79449"	"1316.58171"	"1316.58124"	"0.36"	"0.00024"	"5/74"	"5"	"74"	"388761.128234863"	"HCD"	"MS2"	"19.8308"	"26.9"	"100.000"	"76.0327"	"25877"	"25877"	"25855"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.6"	""	"27.7"	""	"34.3"	""	"42.7"	""	"54.8"	"54.9"	""	"144"	"20"	"28.000"	"21.000"	"0.0718344045952238"	"14"	"0.001546"	"0.0192"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYYEQWGK"	"[R].NYYEQWGk.[L]"	"K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"658.82690"	"1316.64653"	"1316.64727"	"-0.56"	"-0.00037"	"6/70"	"6"	"70"	"778936.159912109"	"HCD"	"MS2"	"14.80252"	"42.4"	"100.000"	"57.3166"	"18305"	"18305"	"18283"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.6"	""	"43.4"	""	"42.9"	""	"56.2"	"0.5"	"94.0"	"108.0"	""	"448"	"38"	"33.000"	"26.000"	"0.00358300998409685"	"15"	"0.006505"	"0.07321"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYYEQWGK"	"[R].NYYEQWGk.[L]"	"K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"658.82941"	"1316.65154"	"1316.64727"	"3.24"	"0.00213"	"6/70"	"6"	"70"	"846048.380432129"	"HCD"	"MS2"	"35.73467"	"44.5"	"100.000"	"57.1326"	"18244"	"18244"	"18224"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.5"	""	"45.7"	""	"42.8"	""	"60.2"	"0.0"	"101.3"	"120.1"	""	"470"	"38"	"33.000"	"26.000"	"0.00401853599046217"	"16"	"0.008437"	"0.1019"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGPAAQDGK"	"[K].dGPAAQDGk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JK71"	"Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Magi3 PE=1 SV=2"	"Q9JK71"	"Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Magi3 PE=1 SV=2"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"658.86310"	"1316.71892"	"1316.72105"	"-1.62"	"-0.00107"	"7/82"	"7"	"82"	"610823.223205566"	"HCD"	"MS2"	"0"	"50.9"	"100.000"	"26.7368"	"5894"	"5894"	"5866"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"82.7"	""	"53.3"	""	"61.4"	""	"88.8"	"2.4"	"91.3"	"102.8"	""	"778"	"49"	"35.000"	"28.000"	"0.000535734483399746"	"20"	"0"	"0.0001627"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGPAAQDGK"	"[K].dGPAAQDGk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JK71"	"Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Magi3 PE=1 SV=2"	"Q9JK71"	"Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Magi3 PE=1 SV=2"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"658.86377"	"1316.72026"	"1316.72105"	"-0.60"	"-0.00039"	"8/82"	"8"	"82"	"662028.673461914"	"HCD"	"MS2"	"0"	"55.3"	"100.000"	"26.8360"	"5918"	"5918"	"5895"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"84.8"	""	"59.5"	""	"71.7"	""	"91.5"	""	"106.2"	"111.2"	""	"782"	"52"	"35.000"	"28.000"	"0.000235058931355962"	"22"	"0"	"0.0001578"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITEPAEIMA"	"[K].lITEPAEIMA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P52481"	"Adenylyl cyclase-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cap2 PE=1 SV=1"	"P52481"	"Adenylyl cyclase-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cap2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"658.86969"	"1316.73210"	"1316.73331"	"-0.91"	"-0.00060"	"6/82"	"6"	"82"	"86702.2862548828"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"108.5740"	"37885"	"37885"	"37869"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.6"	""	"2.0"	""	"5.4"	""	"6.8"	""	"4.0"	"8.0"	""	"839"	"32"	"36.000"	"29.000"	"0.0290892125623951"	"22"	"0.003967"	"0.04226"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QENGASVILR"	"[R].qEnGASVILR.[D]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"658.87183"	"1316.73638"	"1316.73715"	"-0.58"	"-0.00038"	"12/98"	"12"	"98"	"701451.126464844"	"HCD"	"MS2"	"11.30664"	"43.6"	"100.000"	"50.2650"	"15446"	"15446"	"15424"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.5"	""	"50.3"	""	"54.4"	""	"80.7"	""	"86.0"	"80.9"	""	"924"	"28"	"36.000"	"29.000"	"0.0697657031223836"	"27"	"0"	"0.002605"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QENGASVILR"	"[R].qEnGASVILR.[D]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.5250"	"0.0000"	"1"	"1"	"1"	"658.87189"	"1316.73650"	"1316.73715"	"-0.49"	"-0.00032"	"6/98"	"6"	"98"	"713743.239440918"	"HCD"	"MS2"	"0"	"40.6"	"100.000"	"49.5856"	"15169"	"15169"	"15142"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.0"	""	"43.1"	""	"50.5"	""	"70.9"	"0.2"	"78.8"	"84.8"	""	"924"	"40"	"36.000"	"29.000"	"0.00441206574741903"	"26"	"0"	"0.0006636"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QENGASVILR"	"[R].qEnGASVILR.[D]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.3448"	"0.0000"	"1"	"1"	"1"	"658.87189"	"1316.73650"	"1316.73715"	"-0.49"	"-0.00032"	"13/98"	"13"	"98"	"475934.552185059"	"HCD"	"MS2"	"29.90378"	"27.9"	"100.000"	"49.8003"	"15245"	"15245"	"15217"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.9"	""	"28.1"	""	"37.0"	""	"48.0"	""	"49.4"	"62.1"	""	"924"	"29"	"36.000"	"29.000"	"0.0565772684060452"	"23"	"0"	"0.002287"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QENGASVILR"	"[R].qEnGASVILR.[D]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"658.87231"	"1316.73735"	"1316.73715"	"0.16"	"0.00010"	"7/98"	"7"	"98"	"1324635.17138672"	"HCD"	"MS2"	"0"	"67.1"	"100.000"	"50.4547"	"15512"	"15512"	"15486"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.5"	""	"83.8"	""	"84.3"	""	"121.1"	""	"131.1"	"133.1"	""	"938"	"33"	"36.000"	"29.000"	"0.0262526315101206"	""	"0"	"0.002129"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQQTEAELR"	"[K].lQQTEAELR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"658.87250"	"1316.73772"	"1316.73715"	"0.44"	"0.00029"	"7/84"	"7"	"84"	"1071060.79418945"	"HCD"	"MS2"	"9.883699"	"55.5"	"100.000"	"49.9405"	"15314"	"15314"	"15286"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"83.9"	""	"63.5"	""	"70.4"	""	"92.3"	"0.4"	"107.1"	"108.1"	""	"938"	"40"	"36.000"	"29.000"	"0.00504862185192392"	""	"0"	"0.0008187"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QENGASVILR"	"[R].qENGASVILR.[D]"	"N-Term(TMT6plex); Q1(Deamidated)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.0625"	"0.0000"	"1"	"1"	"1"	"658.87256"	"1316.73784"	"1316.73715"	"0.53"	"0.00035"	"7/98"	"7"	"98"	"407245.903747559"	"HCD"	"MS2"	"16.68938"	"28.5"	"100.000"	"50.1439"	"15385"	"15385"	"15358"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.7"	""	"29.0"	""	"31.7"	""	"51.1"	"0.1"	"57.2"	"60.1"	""	"938"	"16"	"36.000"	"29.000"	"1.15923862401256"	"27"	"0.007627"	"0.09221"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAATQPDGK"	"[R].aAATQPDGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"658.88202"	"1316.75676"	"1316.75744"	"-0.51"	"-0.00034"	"8/78"	"8"	"78"	"984456.357177734"	"HCD"	"MS2"	"0"	"71.9"	"100.000"	"27.2573"	"6104"	"6104"	"6086"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.0"	""	"60.3"	""	"64.3"	""	"140.6"	"1.5"	"183.0"	"166.2"	""	"958"	"41"	"36.000"	"29.000"	"0.00339887750854463"	"27"	"0"	"0.002491"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAATQPDGK"	"[R].aAATQPDGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"658.88232"	"1316.75737"	"1316.75744"	"-0.05"	"-0.00003"	"7/78"	"7"	"78"	"972438.672302246"	"HCD"	"MS2"	"0"	"69.6"	"100.000"	"27.3153"	"6113"	"6113"	"6089"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.0"	""	"52.1"	""	"66.2"	""	"134.5"	""	"178.4"	"169.0"	""	"947"	"50"	"36.000"	"29.000"	"0.000459536469490739"	"27"	"0"	"0.000147"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEEIVTLR"	"[K].vEEEIVTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PCT3"	"Tumor protein D54 OS=Rattus norvegicus OX=10116 GN=Tpd52l2 PE=1 SV=1"	"Q6PCT3"	"Tumor protein D54 OS=Rattus norvegicus OX=10116 GN=Tpd52l2 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"658.88416"	"1316.76103"	"1316.76230"	"-0.96"	"-0.00063"	"7/74"	"7"	"74"	"592878.280517578"	"HCD"	"MS2"	"10.50781"	"31.3"	"100.000"	"76.1331"	"25927"	"25927"	"25913"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.4"	""	"35.0"	""	"39.2"	""	"63.7"	""	"65.3"	"68.4"	""	"986"	"52"	"36.000"	"29.000"	"0.000343436871456609"	""	"0"	"0.0002943"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEEIVTLR"	"[K].vEEEIVTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PCT3"	"Tumor protein D54 OS=Rattus norvegicus OX=10116 GN=Tpd52l2 PE=1 SV=1"	"Q6PCT3"	"Tumor protein D54 OS=Rattus norvegicus OX=10116 GN=Tpd52l2 PE=1 SV=1"	"0"	"2"	"2"	"0.5750"	"0.0000"	"1"	"1"	"1"	"658.88434"	"1316.76140"	"1316.76230"	"-0.68"	"-0.00045"	"8/74"	"8"	"74"	"825688.868408203"	"HCD"	"MS2"	"0"	"41.3"	"100.000"	"76.4425"	"26052"	"26052"	"26034"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.3"	""	"47.2"	""	"44.9"	""	"85.8"	""	"92.7"	"90.9"	""	"988"	"40"	"36.000"	"29.000"	"0.00491730276171654"	""	"0"	"0.000667"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEEIVTLR"	"[K].vEEEIVTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PCT3"	"Tumor protein D54 OS=Rattus norvegicus OX=10116 GN=Tpd52l2 PE=1 SV=1"	"Q6PCT3"	"Tumor protein D54 OS=Rattus norvegicus OX=10116 GN=Tpd52l2 PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"658.88458"	"1316.76189"	"1316.76230"	"-0.31"	"-0.00020"	"8/74"	"8"	"74"	"491927.473754883"	"HCD"	"MS2"	"0"	"27.2"	"100.000"	"76.2172"	"25952"	"25952"	"25933"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.8"	""	"27.1"	""	"34.4"	""	"59.1"	"0.5"	"55.3"	"57.1"	""	"979"	"34"	"36.000"	"29.000"	"0.0177726707809965"	"29"	"0"	"0.0007723"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEEIVTLR"	"[K].vEEEIVTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PCT3"	"Tumor protein D54 OS=Rattus norvegicus OX=10116 GN=Tpd52l2 PE=1 SV=1"	"Q6PCT3"	"Tumor protein D54 OS=Rattus norvegicus OX=10116 GN=Tpd52l2 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"658.88477"	"1316.76225"	"1316.76230"	"-0.03"	"-0.00002"	"6/74"	"6"	"74"	"956785.465026855"	"HCD"	"MS2"	"0"	"49.8"	"100.000"	"76.5131"	"26073"	"26073"	"26056"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.8"	""	"47.4"	""	"57.7"	""	"106.1"	""	"107.7"	"116.3"	""	"979"	"40"	"36.000"	"29.000"	"0.00458936602390218"	""	"0"	"0.0003705"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"439.59875"	"1316.78171"	"1316.78259"	"-0.67"	"-0.00029"	"8/66"	"8"	"66"	"1985515.91552734"	"HCD"	"MS2"	"29.45435"	"107.9"	"100.000"	"54.4646"	"17144"	"17144"	"17120"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"152.5"	""	"136.0"	""	"151.7"	""	"161.2"	""	"206.8"	"217.2"	""	"843"	"24"	"36.000"	"29.000"	"0.176115499541551"	"26"	"0.008478"	"0.1023"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"439.59879"	"1316.78180"	"1316.78259"	"-0.60"	"-0.00026"	"6/66"	"6"	"66"	"8402504.77386475"	"HCD"	"MS2"	"27.22498"	"400.7"	"100.000"	"53.8578"	"16911"	"16911"	"16892"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"575.9"	""	"524.6"	""	"570.2"	""	"644.5"	""	"726.1"	"758.4"	""	"843"	"34"	"36.000"	"29.000"	"0.0182724835240343"	""	"0.0002479"	"0.005685"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6939"	"0.0000"	"1"	"1"	"1"	"658.89459"	"1316.78191"	"1316.78259"	"-0.52"	"-0.00034"	"7/66"	"7"	"66"	"7039436.2355957"	"HCD"	"MS2"	"9.229317"	"469.3"	"100.000"	"53.7010"	"16847"	"16847"	"16828"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"752.1"	""	"668.3"	""	"610.3"	""	"824.5"	"0.3"	"765.2"	"818.9"	""	"844"	"49"	"36.000"	"29.000"	"0.00056795306941161"	""	"0"	"0.001917"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.4643"	"0.0000"	"1"	"1"	"1"	"439.59882"	"1316.78189"	"1316.78259"	"-0.53"	"-0.00023"	"8/66"	"8"	"66"	"2951528.75146484"	"HCD"	"MS2"	"22.86844"	"156.3"	"100.000"	"54.1661"	"17037"	"17037"	"17017"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"213.1"	""	"215.4"	""	"223.0"	""	"232.5"	""	"292.0"	"309.8"	""	"844"	"28"	"36.000"	"29.000"	"0.0701960138456212"	"29"	"0.001134"	"0.01394"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6939"	"0.0000"	"1"	"1"	"1"	"658.89471"	"1316.78215"	"1316.78259"	"-0.33"	"-0.00022"	"7/66"	"7"	"66"	"43532944.1064453"	"HCD"	"MS2"	"0"	"734.0"	"25.862"	"54.0048"	"16972"	"16972"	"16955"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1075.4"	""	"940.4"	""	"984.8"	""	"1229.4"	""	"1301.3"	"1426.6"	""	"832"	"49"	"36.000"	"29.000"	"0.000565058393780256"	""	"0.0001301"	"0.00449"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6739"	"0.0000"	"1"	"1"	"1"	"658.89471"	"1316.78215"	"1316.78259"	"-0.33"	"-0.00022"	"7/66"	"7"	"66"	"8297659.7791748"	"HCD"	"MS2"	"6.21509"	"541.8"	"100.000"	"53.9662"	"16945"	"16945"	"16928"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"861.1"	""	"737.2"	""	"728.5"	""	"919.8"	""	"946.6"	"939.4"	""	"832"	"46"	"36.000"	"29.000"	"0.000961818952713047"	""	"0.0001301"	"0.004183"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"658.89496"	"1316.78264"	"1316.78259"	"0.04"	"0.00003"	"7/66"	"7"	"66"	"2520538.98797607"	"HCD"	"MS2"	"9.216139"	"184.8"	"100.000"	"54.5711"	"17187"	"17187"	"17168"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"263.9"	""	"251.9"	""	"255.6"	""	"286.3"	""	"335.3"	"359.9"	""	"832"	"46"	"36.000"	"29.000"	"0.00102351292332541"	""	"0"	"0.002712"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.4412"	"0.0000"	"1"	"1"	"1"	"439.59909"	"1316.78272"	"1316.78259"	"0.10"	"0.00004"	"6/66"	"6"	"66"	"9476249.11126709"	"HCD"	"MS2"	"24.29596"	"445.8"	"100.000"	"54.1342"	"17013"	"17013"	"16992"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"666.0"	""	"583.9"	""	"608.1"	""	"731.3"	""	"809.7"	"828.4"	""	"832"	"34"	"36.000"	"29.000"	"0.0183693306098978"	""	"0.0002479"	"0.006028"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"658.89508"	"1316.78288"	"1316.78259"	"0.23"	"0.00015"	"7/66"	"7"	"66"	"2503593.92150879"	"HCD"	"MS2"	"10.71135"	"173.8"	"100.000"	"54.3258"	"17100"	"17100"	"17081"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"245.3"	""	"221.0"	""	"244.8"	""	"275.0"	""	"319.7"	"342.0"	""	"840"	"48"	"36.000"	"29.000"	"0.000621225523030647"	""	"0"	"0.001527"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6739"	"0.0000"	"1"	"1"	"1"	"658.89551"	"1316.78374"	"1316.78259"	"0.87"	"0.00058"	"7/66"	"7"	"66"	"35232976.623291"	"HCD"	"MS2"	"0.158501"	"723.0"	"31.919"	"54.2792"	"17073"	"17073"	"17056"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1055.1"	""	"909.2"	""	"973.1"	""	"1130.5"	""	"1351.5"	"1437.3"	""	"880"	"46"	"36.000"	"29.000"	"0.00100104286953971"	""	"0.0001301"	"0.004037"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDEHGFISR"	"[R].qDEHGFISR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"439.89575"	"1317.67270"	"1317.67488"	"-1.65"	"-0.00073"	"8/92"	"8"	"92"	"7790166.68774414"	"HCD"	"MS2"	"34.43537"	"229.9"	"100.000"	"28.3801"	"6546"	"6546"	"6523"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"353.5"	""	"307.2"	""	"325.3"	""	"327.4"	"3.5"	"390.7"	"470.0"	""	"605"	"32"	"34.000"	"27.000"	"0.0194413034488398"	"20"	"0"	"0.002267"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDEHGFISR"	"[R].qDEHGFISR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"0"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"439.89648"	"1317.67490"	"1317.67488"	"0.02"	"0.00001"	"8/92"	"8"	"92"	"6345697.46087646"	"HCD"	"MS2"	"44.18883"	"168.3"	"100.000"	"28.2972"	"6526"	"6526"	"6505"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"267.0"	""	"214.2"	""	"229.3"	""	"240.6"	""	"295.2"	"349.2"	""	"643"	"35"	"35.000"	"28.000"	"0.0110708502740413"	"19"	"0"	"0.00141"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPSPASVSSGR"	"[R].gSPSPASVSSGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14056"	"Serine/threonine-protein kinase A-Raf OS=Rattus norvegicus OX=10116 GN=Araf PE=1 SV=1"	"P14056"	"Serine/threonine-protein kinase A-Raf OS=Rattus norvegicus OX=10116 GN=Araf PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"659.35059"	"1317.69390"	"1317.69601"	"-1.60"	"-0.00106"	"5/104"	"5"	"104"	"424793.48236084"	"HCD"	"MS2"	"13.46686"	"25.7"	"100.000"	"26.3216"	"5709"	"5709"	"5685"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.8"	""	"31.0"	""	"31.5"	""	"49.1"	"2.7"	"49.3"	"43.8"	""	"733"	"18"	"35.000"	"28.000"	"0.537123283710341"	"25"	"0.006685"	"0.07432"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDVDNASLAR"	"[R].qDVDNASLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"659.35358"	"1317.69988"	"1317.69601"	"2.94"	"0.00193"	"8/100"	"8"	"100"	"3413070.2322998"	"HCD"	"MS2"	"0"	"190.8"	"100.000"	"33.3287"	"8559"	"8559"	"8544"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"261.8"	""	"269.6"	""	"247.0"	""	"247.3"	""	"380.9"	"407.8"	""	"790"	"64"	"35.000"	"28.000"	"1.64284691145138E-05"	"28"	"0"	"2.677E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDVDNASLAR"	"[R].qDVDNASLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7344"	"0.0000"	"1"	"1"	"1"	"659.35370"	"1317.70012"	"1317.69601"	"3.12"	"0.00206"	"8/100"	"8"	"100"	"3214653.03607178"	"HCD"	"MS2"	"0"	"172.1"	"100.000"	"33.3471"	"8574"	"8574"	"8557"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"229.4"	""	"254.1"	""	"234.0"	""	"220.6"	""	"326.0"	"369.8"	""	"790"	"64"	"35.000"	"28.000"	"1.62404139836286E-05"	""	"0"	"6.175E-05"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLGDDEITR"	"[K].aVLGDDEITR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62696"	"Disks large homolog 1 OS=Rattus norvegicus OX=10116 GN=Dlg1 PE=1 SV=1"	"Q62696"	"Disks large homolog 1 OS=Rattus norvegicus OX=10116 GN=Dlg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"659.36371"	"1317.72014"	"1317.72116"	"-0.77"	"-0.00051"	"8/80"	"8"	"80"	"1052167.76806641"	"HCD"	"MS2"	"9.606048"	"64.7"	"100.000"	"55.4652"	"17564"	"17564"	"17543"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"86.9"	""	"66.4"	""	"73.8"	""	"114.4"	""	"130.1"	"142.6"	""	"978"	"40"	"36.000"	"29.000"	"0.00489"	"24"	"0"	"0.0001186"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQLTNTEVR"	"[R].qQLTNTEVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TA68"	"Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Opa1 PE=1 SV=1"	"Q2TA68"	"Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Opa1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"659.36890"	"1317.73052"	"1317.73239"	"-1.43"	"-0.00094"	"6/86"	"6"	"86"	"665354.18145752"	"HCD"	"MS2"	"29.96533"	"52.3"	"100.000"	"31.5467"	"7833"	"7833"	"7805"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.1"	""	"57.2"	""	"57.5"	""	"94.1"	""	"136.2"	"103.3"	""	"906"	"12"	"36.000"	"29.000"	"2.62481199481377"	"17"	"0.002937"	"0.02779"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTGEEWLVR"	"[R].vTGEEWLVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"659.37115"	"1317.73503"	"1317.73642"	"-1.05"	"-0.00069"	"6/70"	"6"	"70"	"856553.287902832"	"HCD"	"MS2"	"2.239614"	"43.8"	"100.000"	"79.5527"	"27304"	"27304"	"27287"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.6"	""	"54.0"	""	"68.3"	""	"62.0"	""	"74.5"	"88.0"	""	"996"	"40"	"36.000"	"29.000"	"0.00477781514494935"	""	"0"	"0.001729"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTGEEWLVR"	"[R].vTGEEWLVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"659.37140"	"1317.73552"	"1317.73642"	"-0.68"	"-0.00045"	"7/70"	"7"	"70"	"1146243.31970215"	"HCD"	"MS2"	"9.61656"	"55.5"	"100.000"	"79.2577"	"27185"	"27185"	"27169"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"82.9"	""	"79.3"	""	"82.7"	""	"89.6"	""	"84.6"	"107.3"	""	"1004"	"48"	"37.000"	"30.000"	"0.000870369606872577"	""	"0"	"0.0002184"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTGEEWLVR"	"[R].vTGEEWLVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.6809"	"0.0000"	"1"	"1"	"1"	"659.37177"	"1317.73625"	"1317.73642"	"-0.12"	"-0.00008"	"7/70"	"7"	"70"	"1195132.03100586"	"HCD"	"MS2"	"0"	"59.0"	"100.000"	"79.4858"	"27273"	"27273"	"27258"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.5"	""	"83.5"	""	"83.0"	""	"89.6"	""	"103.9"	"121.4"	""	"971"	"47"	"36.000"	"29.000"	"0.000869339142134135"	""	"0"	"0.0004135"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTGEEWLVR"	"[R].vTGEEWLVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"659.37213"	"1317.73699"	"1317.73642"	"0.43"	"0.00028"	"7/70"	"7"	"70"	"759782.542663574"	"HCD"	"MS2"	"16.49774"	"38.4"	"100.000"	"79.2096"	"27162"	"27162"	"27148"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.2"	""	"54.7"	""	"61.9"	""	"56.0"	""	"68.7"	"62.2"	""	"972"	"48"	"36.000"	"29.000"	"0.000821554292778627"	""	"0"	"0.0009542"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEPGESAAK"	"[R].aEPGESAAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q68FS3"	"F-box only protein 7 OS=Rattus norvegicus OX=10116 GN=Fbxo7 PE=2 SV=1"	"Q68FS3"	"F-box only protein 7 OS=Rattus norvegicus OX=10116 GN=Fbxo7 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"659.37347"	"1317.73967"	"1317.74145"	"-1.35"	"-0.00089"	"7/72"	"7"	"72"	"734020.849609375"	"HCD"	"MS2"	"26.84012"	"54.1"	"100.000"	"28.4215"	"6563"	"6563"	"6537"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"92.2"	""	"67.0"	""	"74.8"	""	"77.9"	""	"101.9"	"102.6"	""	"959"	"24"	"36.000"	"29.000"	"0.212710344765122"	"20"	"0.0023"	"0.02293"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEPGESAAK"	"[R].aEPGESAAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q68FS3"	"F-box only protein 7 OS=Rattus norvegicus OX=10116 GN=Fbxo7 PE=2 SV=1"	"Q68FS3"	"F-box only protein 7 OS=Rattus norvegicus OX=10116 GN=Fbxo7 PE=2 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"659.37396"	"1317.74065"	"1317.74145"	"-0.61"	"-0.00040"	"8/72"	"8"	"72"	"838503.843994141"	"HCD"	"MS2"	"27.25431"	"59.7"	"100.000"	"28.3132"	"6533"	"6533"	"6505"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"94.8"	""	"73.2"	""	"79.3"	""	"97.7"	""	"113.6"	"107.2"	""	"958"	"28"	"36.000"	"29.000"	"0.0701997415817882"	"19"	"0.001374"	"0.01686"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGVNNAEK"	"[K].qGVNNAEk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"659.37891"	"1317.75054"	"1317.75268"	"-1.63"	"-0.00107"	"7/70"	"7"	"70"	"518963.958435059"	"HCD"	"MS2"	"0"	"47.3"	"100.000"	"25.0642"	"5200"	"5200"	"5186"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.0"	""	"58.1"	""	"52.1"	""	"82.7"	""	"88.8"	"89.7"	""	"944"	"45"	"36.000"	"29.000"	"0.0013644009044765"	"26"	"0"	"0.001984"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGVNNAEK"	"[K].qGVNNAEk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"659.37903"	"1317.75078"	"1317.75268"	"-1.45"	"-0.00095"	"7/70"	"7"	"70"	"484203.275512695"	"HCD"	"MS2"	"0"	"44.8"	"100.000"	"24.9993"	"5189"	"5189"	"5170"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"73.6"	""	"57.5"	""	"61.6"	""	"72.1"	""	"82.6"	"77.3"	""	"944"	"25"	"36.000"	"29.000"	"0.16104305428555"	"22"	"0.0006732"	"0.008202"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLTGVDVLR"	"[R].eSLTGVDVLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ES71"	"Dihydroxyacetone phosphate acyltransferase OS=Rattus norvegicus OX=10116 GN=Gnpat PE=1 SV=1"	"Q9ES71"	"Dihydroxyacetone phosphate acyltransferase OS=Rattus norvegicus OX=10116 GN=Gnpat PE=1 SV=1"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"659.38190"	"1317.75652"	"1317.75755"	"-0.78"	"-0.00051"	"14/84"	"14"	"84"	"553807.818603516"	"HCD"	"MS2"	"6.401513"	"31.1"	"100.000"	"73.4798"	"24859"	"24859"	"24839"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.4"	""	"40.6"	""	"30.4"	""	"61.3"	"0.0"	"57.6"	"68.6"	""	"1019"	"35"	"37.000"	"30.000"	"0.0148301037165494"	"18"	"0"	"0.0003088"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLTGVDVLR"	"[R].eSLTGVDVLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ES71"	"Dihydroxyacetone phosphate acyltransferase OS=Rattus norvegicus OX=10116 GN=Gnpat PE=1 SV=1"	"Q9ES71"	"Dihydroxyacetone phosphate acyltransferase OS=Rattus norvegicus OX=10116 GN=Gnpat PE=1 SV=1"	"0"	"2"	"2"	"0.8600"	"0.0000"	"1"	"1"	"1"	"659.38226"	"1317.75725"	"1317.75755"	"-0.23"	"-0.00015"	"7/84"	"7"	"84"	"512331.469177246"	"HCD"	"MS2"	"7.548396"	"30.4"	"100.000"	"73.6057"	"24897"	"24897"	"24875"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.0"	""	"41.6"	""	"36.4"	""	"54.0"	""	"50.6"	"65.9"	""	"999"	"50"	"36.000"	"29.000"	"0.000513494140914173"	"23"	"0"	"0.0002112"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDDLQAIK"	"[K].gDDLQAIk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"659.39215"	"1317.77703"	"1317.77784"	"-0.62"	"-0.00041"	"7/64"	"7"	"64"	"593363.024597168"	"HCD"	"MS2"	"23.85306"	"52.9"	"100.000"	"57.9360"	"18557"	"18557"	"18530"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.4"	""	"44.6"	""	"34.7"	""	"109.4"	"1.3"	"139.7"	"117.5"	""	"873"	"47"	"36.000"	"29.000"	"0.00097720177698508"	""	"0"	"0.0009437"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELANEVK"	"[R].gELANEVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"659.39215"	"1317.77703"	"1317.77784"	"-0.62"	"-0.00041"	"7/70"	"7"	"70"	"2302683.92382813"	"HCD"	"MS2"	"22.43236"	"171.3"	"100.000"	"47.9468"	"14489"	"14489"	"14474"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"167.0"	""	"204.3"	""	"203.2"	""	"334.9"	""	"353.9"	"367.0"	""	"873"	"42"	"36.000"	"29.000"	"0.00306185237760317"	""	"0"	"0.003641"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDDLQAIK"	"[K].gDDLQAIk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.5510"	"0.0000"	"1"	"1"	"1"	"659.39227"	"1317.77727"	"1317.77784"	"-0.43"	"-0.00028"	"7/64"	"7"	"64"	"633298.964294434"	"HCD"	"MS2"	"31.55581"	"53.4"	"100.000"	"57.7798"	"18508"	"18508"	"18479"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.6"	""	"39.6"	""	"35.8"	""	"116.2"	""	"145.0"	"116.8"	""	"873"	"49"	"36.000"	"29.000"	"0.000548257079152813"	""	"0"	"0.001016"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELANEVK"	"[R].gELANEVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.5476"	"0.0000"	"1"	"1"	"1"	"659.39227"	"1317.77727"	"1317.77784"	"-0.43"	"-0.00028"	"7/70"	"7"	"70"	"2251478.40905762"	"HCD"	"MS2"	"29.62565"	"174.6"	"100.000"	"47.6206"	"14368"	"14368"	"14349"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"183.3"	""	"185.6"	""	"190.9"	""	"367.6"	""	"367.4"	"366.6"	""	"873"	"42"	"36.000"	"29.000"	"0.00296472385637401"	""	"0"	"0.003433"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELANEVK"	"[R].gELANEVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.3103"	"0.0000"	"1"	"1"	"1"	"659.39282"	"1317.77837"	"1317.77784"	"0.40"	"0.00027"	"7/70"	"7"	"70"	"663296.766723633"	"HCD"	"MS2"	"40.13649"	"54.7"	"100.000"	"48.2589"	"14616"	"14616"	"14590"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.8"	""	"61.7"	""	"70.5"	""	"101.1"	"1.6"	"109.5"	"120.8"	""	"858"	"29"	"36.000"	"29.000"	"0.0493693366857163"	""	"0"	"0.003797"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GELANEVK"	"[R].gELANEVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"659.39282"	"1317.77837"	"1317.77784"	"0.40"	"0.00027"	"7/70"	"7"	"70"	"719806.303588867"	"HCD"	"MS2"	"27.44995"	"57.2"	"100.000"	"47.9283"	"14493"	"14493"	"14474"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.6"	""	"52.8"	""	"81.0"	""	"121.1"	""	"116.6"	"123.7"	""	"858"	"28"	"36.000"	"29.000"	"0.0618667485804169"	"26"	"0.0002479"	"0.005259"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNEILK"	"[K].eLnEILk.[S]"	"N-Term(TMT6plex); N3(Deamidated); K7(TMT6plex)"	"1"	"1"	"P61295"	"Heart- and neural crest derivatives-expressed protein 2 OS=Rattus norvegicus OX=10116 GN=Hand2 PE=2 SV=1"	"P61295"	"Heart- and neural crest derivatives-expressed protein 2 OS=Rattus norvegicus OX=10116 GN=Hand2 PE=2 SV=1"	"0"	"2"	"2"	"0.0870"	"0.0000"	"1"	"1"	"3"	"659.40472"	"1317.80217"	"1317.80299"	"-0.62"	"-0.00041"	"6/62"	"6"	"62"	"515142.157897949"	"HCD"	"MS2"	"51.42841"	"31.1"	"100.000"	"82.9832"	"28677"	"28677"	"28663"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.0"	""	"39.7"	""	"40.1"	""	"53.1"	""	"55.8"	"66.0"	""	"880"	"23"	"36.000"	"29.000"	"0.198359349998242"	""	"0.00344"	"0.03238"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNEILK"	"[K].eLnEILk.[S]"	"N-Term(TMT6plex); N3(Deamidated); K7(TMT6plex)"	"1"	"1"	"P61295"	"Heart- and neural crest derivatives-expressed protein 2 OS=Rattus norvegicus OX=10116 GN=Hand2 PE=2 SV=1"	"P61295"	"Heart- and neural crest derivatives-expressed protein 2 OS=Rattus norvegicus OX=10116 GN=Hand2 PE=2 SV=1"	"0"	"2"	"2"	"0.0952"	"0.0000"	"1"	"1"	"3"	"659.40491"	"1317.80254"	"1317.80299"	"-0.34"	"-0.00023"	"9/62"	"9"	"62"	"559022.635620117"	"HCD"	"MS2"	"51.81527"	"36.4"	"100.000"	"82.9932"	"28682"	"28682"	"28671"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.2"	""	"48.0"	""	"48.5"	""	"55.6"	""	"68.7"	"87.5"	""	"861"	"21"	"36.000"	"29.000"	"0.336490769875276"	""	"0.002871"	"0.02713"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPGQGSPGGNR"	"[R].yPGQGSPGGNR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P13852"	"Major prion protein OS=Rattus norvegicus OX=10116 GN=Prnp PE=1 SV=2"	"P13852"	"Major prion protein OS=Rattus norvegicus OX=10116 GN=Prnp PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"659.83801"	"1318.66875"	"1318.67013"	"-1.05"	"-0.00069"	"8/94"	"8"	"94"	"996368.256713867"	"HCD"	"MS2"	"43.35223"	"52.7"	"100.000"	"26.1840"	"5654"	"5654"	"5640"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.3"	""	"53.0"	""	"62.4"	""	"113.1"	""	"111.6"	"102.0"	""	"646"	"15"	"35.000"	"28.000"	"1.01906649335"	"18"	"0.004817"	"0.0509"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANEVEQMIR"	"[K].aNEVEQMIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"659.85278"	"1318.69829"	"1318.69865"	"-0.27"	"-0.00018"	"7/82"	"7"	"82"	"2055026.70965576"	"HCD"	"MS2"	"7.198062"	"124.2"	"100.000"	"62.9896"	"20592"	"20592"	"20583"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"177.3"	""	"140.3"	""	"157.6"	""	"174.2"	"3.6"	"249.7"	"276.7"	""	"853"	"42"	"36.000"	"29.000"	"0.00272219376860269"	"26"	"0"	"0.0006016"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANEVEQMIR"	"[K].aNEVEQMIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"659.85297"	"1318.69866"	"1318.69865"	"0.00"	"0.00000"	"7/82"	"7"	"82"	"1827036.88665771"	"HCD"	"MS2"	"2.809128"	"111.6"	"100.000"	"63.1087"	"20626"	"20626"	"20614"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"154.1"	""	"132.2"	""	"145.8"	""	"149.0"	"3.2"	"233.0"	"242.5"	""	"850"	"34"	"36.000"	"29.000"	"0.0182973809458977"	"27"	"0"	"0.0008812"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLETENAGLR"	"[R].sLETENAGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.6531"	"0.0000"	"1"	"1"	"1"	"659.86169"	"1318.71611"	"1318.71641"	"-0.23"	"-0.00015"	"9/88"	"9"	"88"	"7837577.49981689"	"HCD"	"MS2"	"5.058802"	"370.1"	"100.000"	"41.9027"	"12034"	"12034"	"12017"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"262.1"	""	"294.3"	""	"242.8"	""	"665.6"	""	"915.7"	"1167.4"	""	"910"	"49"	"36.000"	"29.000"	"0.000514057141176123"	""	"0"	"0.0003192"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLETENAGLR"	"[R].sLETENAGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.6792"	"0.0000"	"1"	"1"	"1"	"659.86188"	"1318.71648"	"1318.71641"	"0.05"	"0.00003"	"9/88"	"9"	"88"	"8019107.98449707"	"HCD"	"MS2"	"3.62556"	"360.0"	"100.000"	"41.7641"	"11987"	"11987"	"11969"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"261.2"	""	"287.8"	""	"223.5"	""	"650.7"	"3.9"	"908.6"	"1106.0"	""	"904"	"53"	"36.000"	"29.000"	"0.000240512933188591"	""	"0"	"0.0002657"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EISQDSLAAR"	"[K].eISQDSLAAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"659.86224"	"1318.71721"	"1318.71641"	"0.61"	"0.00040"	"8/94"	"8"	"94"	"1977449.69628906"	"HCD"	"MS2"	"24.62034"	"94.3"	"100.000"	"43.3652"	"12631"	"12631"	"12602"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"137.7"	""	"106.8"	""	"96.4"	""	"167.2"	""	"187.2"	"200.2"	""	"912"	"47"	"36.000"	"29.000"	"0.000943984455048713"	"29"	"0"	"8.726E-05"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EISQDSLAAR"	"[K].eISQDSLAAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"659.86243"	"1318.71758"	"1318.71641"	"0.89"	"0.00058"	"8/94"	"8"	"94"	"1967094.73742676"	"HCD"	"MS2"	"13.16624"	"99.6"	"100.000"	"43.2314"	"12587"	"12587"	"12562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"140.0"	""	"120.0"	""	"118.0"	""	"178.6"	""	"201.6"	"193.6"	""	"896"	"47"	"36.000"	"29.000"	"0.000906312592047866"	"28"	"0"	"0.0001033"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLETENAGLR"	"[R].sLETENAGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"659.86298"	"1318.71868"	"1318.71641"	"1.72"	"0.00113"	"8/88"	"8"	"88"	"991432.066650391"	"HCD"	"MS2"	"0"	"78.7"	"100.000"	"42.0864"	"12119"	"12119"	"12092"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.2"	""	"84.4"	""	"91.9"	""	"124.4"	"7.7"	"167.0"	"194.0"	""	"882"	"18"	"36.000"	"29.000"	"0.743769884196434"	"22"	"0.0002479"	"0.005607"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLSEDSLGR"	"[R].nVLSEDSLGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P97520"	"C5a anaphylatoxin chemotactic receptor 1 OS=Rattus norvegicus OX=10116 GN=C5ar1 PE=1 SV=1"	"P97520"	"C5a anaphylatoxin chemotactic receptor 1 OS=Rattus norvegicus OX=10116 GN=C5ar1 PE=1 SV=1"	"0"	"2"	"2"	"0.1875"	"0.0000"	"1"	"1"	"1"	"659.86340"	"1318.71953"	"1318.71641"	"2.37"	"0.00156"	"8/96"	"8"	"96"	"2005428.82312012"	"HCD"	"MS2"	"47.92608"	"110.6"	"100.000"	"55.5615"	"17589"	"17589"	"17570"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"148.8"	""	"110.5"	""	"125.0"	""	"217.9"	""	"225.0"	"224.3"	""	"897"	"16"	"36.000"	"29.000"	"1.16617156407962"	"27"	"0"	"0.003417"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGLDVLQMK"	"[M].sGGLDVLQMk.[E]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"659.86505"	"1318.72283"	"1318.72380"	"-0.74"	"-0.00049"	"6/84"	"6"	"84"	"221780.803955078"	"HCD"	"MS2"	"41.14498"	"7.5"	"100.000"	"106.2108"	"36916"	"36916"	"36905"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.8"	""	"9.0"	""	"10.1"	""	"12.5"	""	"15.0"	"16.8"	""	"915"	"33"	"36.000"	"29.000"	"0.0211539317290162"	"21"	"0"	"0.001563"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGLDVLQMK"	"[M].sGGLDVLQMk.[E]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"659.86511"	"1318.72295"	"1318.72380"	"-0.65"	"-0.00043"	"7/84"	"7"	"84"	"218991.004882813"	"HCD"	"MS2"	"52.7644"	"7.6"	"100.000"	"106.1707"	"36971"	"36971"	"36962"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.8"	""	"7.4"	""	"10.6"	""	"11.9"	""	"15.5"	"20.4"	""	"915"	"8"	"36.000"	"29.000"	"6.84527812663203"	"13"	"0.003653"	"0.03776"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATGAAAAEAK"	"[R].aTGAAAAEAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6MG08"	"ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus OX=10116 GN=Abcf1 PE=1 SV=1"	"Q6MG08"	"ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus OX=10116 GN=Abcf1 PE=1 SV=1"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"659.88910"	"1318.77092"	"1318.77309"	"-1.64"	"-0.00108"	"9/84"	"9"	"84"	"813350.33026123"	"HCD"	"MS2"	"100"	"68.5"	"100.000"	"30.7835"	"7523"	"7523"	"7505"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"100.9"	""	"93.7"	""	"97.5"	""	"104.7"	"0.7"	"126.7"	"124.0"	""	"874"	"45"	"36.000"	"29.000"	"0.00149789522720799"	"19"	"0"	"2.271E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATGAAAAEAK"	"[R].aTGAAAAEAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6MG08"	"ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus OX=10116 GN=Abcf1 PE=1 SV=1"	"Q6MG08"	"ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus OX=10116 GN=Abcf1 PE=1 SV=1"	"0"	"2"	"2"	"0.9138"	"0.0000"	"1"	"1"	"1"	"659.88959"	"1318.77190"	"1318.77309"	"-0.90"	"-0.00059"	"9/84"	"9"	"84"	"822295.341186523"	"HCD"	"MS2"	"100"	"69.4"	"100.000"	"30.7235"	"7511"	"7511"	"7492"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"99.4"	""	"96.3"	""	"97.4"	""	"109.1"	""	"124.7"	"135.9"	""	"982"	"58"	"36.000"	"29.000"	"7.69274775423102E-05"	"21"	"0"	"1.23E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATGAAAAEAK"	"[R].aTGAAAAEAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6MG08"	"ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus OX=10116 GN=Abcf1 PE=1 SV=1"	"Q6MG08"	"ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus OX=10116 GN=Abcf1 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"659.89099"	"1318.77471"	"1318.77309"	"1.23"	"0.00081"	"11/84"	"11"	"84"	"376684.098937988"	"HCD"	"MS2"	"0"	"33.0"	"100.000"	"30.9786"	"7601"	"7601"	"7578"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.1"	""	"38.1"	""	"49.9"	""	"51.1"	"1.2"	"66.1"	"60.3"	""	"930"	"17"	"36.000"	"29.000"	"0.8384032494997"	"18"	"0.008437"	"0.1006"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATGAAAAEAK"	"[R].aTGAAAAEAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6MG08"	"ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus OX=10116 GN=Abcf1 PE=1 SV=1"	"Q6MG08"	"ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus OX=10116 GN=Abcf1 PE=1 SV=1"	"0"	"2"	"2"	"0.7627"	"0.0000"	"1"	"1"	"1"	"659.89111"	"1318.77495"	"1318.77309"	"1.41"	"0.00093"	"9/84"	"9"	"84"	"473611.119812012"	"HCD"	"MS2"	"0"	"42.8"	"100.000"	"30.9024"	"7582"	"7582"	"7558"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.8"	""	"49.8"	""	"61.5"	""	"65.4"	""	"79.9"	"82.0"	""	"932"	"59"	"36.000"	"29.000"	"5.56398456680351E-05"	""	"0"	"6.338E-05"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IQQQLTK"	"[K].iQqqLTk.[A]"	"N-Term(TMT6plex); Q3(Deamidated); Q4(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q8CHN6"	"Sphingosine-1-phosphate lyase 1 OS=Rattus norvegicus OX=10116 GN=Sgpl1 PE=2 SV=1"	"Q8CHN6"	"Sphingosine-1-phosphate lyase 1 OS=Rattus norvegicus OX=10116 GN=Sgpl1 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"659.90210"	"1318.79692"	"1318.79824"	"-1.00"	"-0.00066"	"6/58"	"6"	"58"	"874057.48638916"	"HCD"	"MS2"	"4.810366"	"65.8"	"100.000"	"58.3766"	"18752"	"18752"	"18735"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"101.5"	""	"74.4"	""	"93.7"	""	"115.6"	""	"128.1"	"113.9"	""	"871"	"36"	"36.000"	"29.000"	"0.0101388374271311"	""	"0.001886"	"0.02139"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LQEELTK"	"[].lQEELTk.[]"	"N-Term(TMT6plex); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"659.90210"	"1318.79692"	"1318.79824"	"-1.00"	"-0.00066"	"6/64"	"6"	"64"	"874057.48638916"	"HCD"	"MS2"	"4.810366"	"65.8"	"100.000"	"58.3766"	"18752"	"18752"	"18735"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"101.5"	""	"74.4"	""	"93.7"	""	"115.6"	""	"128.1"	"113.9"	""	"871"	"36"	"36.000"	"29.000"	"0.0101388374271311"	""	"0.001886"	"0.02138"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IQQQLTK"	"[K].iQqqLTk.[A]"	"N-Term(TMT6plex); Q3(Deamidated); Q4(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q8CHN6"	"Sphingosine-1-phosphate lyase 1 OS=Rattus norvegicus OX=10116 GN=Sgpl1 PE=2 SV=1"	"Q8CHN6"	"Sphingosine-1-phosphate lyase 1 OS=Rattus norvegicus OX=10116 GN=Sgpl1 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"659.90411"	"1318.80095"	"1318.79824"	"2.06"	"0.00136"	"12/58"	"12"	"58"	"988252.832824707"	"HCD"	"MS2"	"14.89024"	"77.4"	"100.000"	"58.0909"	"18635"	"18635"	"18607"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"119.8"	""	"99.3"	""	"105.0"	""	"128.6"	""	"145.5"	"139.7"	""	"723"	"38"	"35.000"	"28.000"	"0.00578240227344203"	""	"0.002056"	"0.02227"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LQEELTK"	"[].lQEELTk.[]"	"N-Term(TMT6plex); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"659.90411"	"1318.80095"	"1318.79824"	"2.06"	"0.00136"	"12/64"	"12"	"64"	"988252.832824707"	"HCD"	"MS2"	"14.89024"	"77.4"	"100.000"	"58.0909"	"18635"	"18635"	"18607"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"119.8"	""	"99.3"	""	"105.0"	""	"128.6"	""	"145.5"	"139.7"	""	"723"	"38"	"35.000"	"28.000"	"0.00578240227344203"	""	"0.002056"	"0.02227"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLITEEK"	"[R].qLITEEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"659.90424"	"1318.80120"	"1318.79824"	"2.24"	"0.00148"	"6/64"	"6"	"64"	"2178483.92810059"	"HCD"	"MS2"	"22.30408"	"169.4"	"100.000"	"52.0209"	"16161"	"16161"	"16142"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"173.8"	""	"168.5"	""	"155.7"	""	"323.2"	""	"399.4"	"393.7"	""	"723"	"33"	"35.000"	"28.000"	"0.0164857345116394"	""	"0.005001"	"0.05677"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLITEEK"	"[R].qLITEEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"659.90436"	"1318.80144"	"1318.79824"	"2.43"	"0.00160"	"6/64"	"6"	"64"	"2280063.06842041"	"HCD"	"MS2"	"6.730717"	"178.1"	"100.000"	"52.3253"	"16274"	"16274"	"16256"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"188.1"	""	"169.9"	""	"178.6"	""	"323.9"	"1.1"	"427.0"	"407.2"	""	"723"	"33"	"35.000"	"28.000"	"0.0169086253575322"	""	"0.005921"	"0.06885"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDPMLLSSGR"	"[K].dDPMLLSSGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P22062"	"Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Pcmt1 PE=1 SV=2"	"P22062"	"Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Pcmt1 PE=1 SV=2"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"660.34467"	"1319.68205"	"1319.68267"	"-0.46"	"-0.00031"	"6/86"	"6"	"86"	"385265.433044434"	"HCD"	"MS2"	"0"	"26.4"	"100.000"	"58.9748"	"18981"	"18981"	"18952"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.0"	""	"26.6"	""	"32.0"	""	"42.9"	""	"52.7"	"58.6"	""	"721"	"26"	"35.000"	"28.000"	"0.0862790330184142"	"15"	"0.000936"	"0.0116"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDPMLLSSGR"	"[K].dDPMLLSSGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P22062"	"Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Pcmt1 PE=1 SV=2"	"P22062"	"Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Pcmt1 PE=1 SV=2"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"660.34467"	"1319.68205"	"1319.68267"	"-0.46"	"-0.00031"	"8/86"	"8"	"86"	"474912.787841797"	"HCD"	"MS2"	"14.34806"	"32.7"	"100.000"	"58.8370"	"18940"	"18940"	"18911"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.4"	""	"36.6"	"2.3"	"42.4"	""	"46.5"	"1.4"	"70.8"	"65.2"	""	"721"	"35"	"35.000"	"28.000"	"0.0122434910768842"	"17"	"0"	"0.0005575"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPNYQEGLR"	"[R].gGPNYQEGLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"660.34821"	"1319.68913"	"1319.69053"	"-1.06"	"-0.00070"	"9/84"	"9"	"84"	"2512275.18078613"	"HCD"	"MS2"	"32.72184"	"189.6"	"100.000"	"35.8528"	"9586"	"9586"	"9562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"269.5"	""	"209.2"	""	"212.0"	""	"320.6"	""	"398.6"	"404.8"	""	"727"	"29"	"35.000"	"28.000"	"0.0416393954215452"	"22"	"0"	"0.0004947"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPNYQEGLR"	"[R].gGPNYQEGLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"660.34857"	"1319.68987"	"1319.69053"	"-0.50"	"-0.00033"	"7/84"	"7"	"84"	"1145084.53527832"	"HCD"	"MS2"	"6.714121"	"89.6"	"100.000"	"36.1536"	"9708"	"9708"	"9691"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"131.2"	""	"102.1"	""	"128.9"	""	"139.8"	"5.0"	"163.3"	"178.9"	""	"735"	"41"	"35.000"	"28.000"	"0.00318608489341145"	"21"	"0"	"0.00177"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPNYQEGLR"	"[R].gGPNYQEGLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"660.34894"	"1319.69060"	"1319.69053"	"0.05"	"0.00003"	"7/84"	"7"	"84"	"2645503.45526123"	"HCD"	"MS2"	"54.79618"	"186.0"	"100.000"	"35.9920"	"9638"	"9638"	"9614"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"294.5"	""	"179.7"	""	"221.3"	""	"294.4"	""	"369.5"	"407.2"	""	"709"	"36"	"35.000"	"28.000"	"0.00974128477274799"	"22"	"0"	"0.0001476"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPNYQEGLR"	"[R].gGPNYQEGLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"660.34912"	"1319.69097"	"1319.69053"	"0.33"	"0.00022"	"7/84"	"7"	"84"	"1535125.79748535"	"HCD"	"MS2"	"6.597091"	"106.9"	"100.000"	"36.2648"	"9747"	"9747"	"9736"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"183.3"	""	"111.7"	""	"144.3"	""	"164.9"	"1.4"	"198.9"	"208.4"	""	"714"	"40"	"35.000"	"28.000"	"0.00327844736944639"	"26"	"0"	"0.001846"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTMQNLNDR"	"[K].vTMQNLNDR.[L]"	"N-Term(TMT6plex)"	"1"	"5"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFV3; Q6IFW8; Q6IFV1; Q6IFW6; Q6IFX0"	"Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 27 OS=Rattus norvegicus OX=10116 GN=Krt27 PE=3 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1; Keratin, type I cytoskeletal 25 OS=Rattus norvegicus OX=10116 GN=Krt25 PE=3 SV=1"	"0"	"2"	"2"	"0.1935"	"0.0000"	"1"	"1"	"1"	"660.35010"	"1319.69292"	"1319.69390"	"-0.74"	"-0.00049"	"8/86"	"8"	"86"	"1602600.37994385"	"HCD"	"MS2"	"16.48476"	"103.6"	"100.000"	"45.4087"	"13456"	"13456"	"13435"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"220.2"	""	"137.3"	""	"132.3"	""	"164.7"	"1.0"	"155.9"	"166.5"	""	"761"	"31"	"35.000"	"28.000"	"0.0324604593383692"	""	"0"	"0.001408"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTMQNLNDR"	"[K].vTMQNLNDR.[L]"	"N-Term(TMT6plex)"	"1"	"5"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFV3; Q6IFW8; Q6IFV1; Q6IFW6; Q6IFX0"	"Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 27 OS=Rattus norvegicus OX=10116 GN=Krt27 PE=3 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1; Keratin, type I cytoskeletal 25 OS=Rattus norvegicus OX=10116 GN=Krt25 PE=3 SV=1"	"0"	"2"	"2"	"0.5641"	"0.0000"	"1"	"1"	"1"	"660.35034"	"1319.69341"	"1319.69390"	"-0.37"	"-0.00025"	"7/86"	"7"	"86"	"2041436.62384033"	"HCD"	"MS2"	"9.03831"	"132.4"	"100.000"	"45.3003"	"13423"	"13423"	"13399"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"293.2"	""	"171.1"	""	"172.4"	""	"197.5"	"0.2"	"196.4"	"218.6"	""	"764"	"39"	"35.000"	"28.000"	"0.00436579523889693"	""	"0"	"0.0006229"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEQAEADK"	"[R].aEQAEADk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P58775; P04692"	"Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P58775; P04692"	"Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.4878"	"0.0000"	"1"	"1"	"3"	"660.36237"	"1319.71745"	"1319.72072"	"-2.47"	"-0.00163"	"12/76"	"12"	"76"	"724882.743835449"	"HCD"	"MS2"	"17.86175"	"66.8"	"100.000"	"27.5187"	"6210"	"6210"	"6190"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.3"	""	"49.1"	""	"63.4"	""	"112.7"	""	"156.1"	"181.6"	""	"921"	"41"	"36.000"	"29.000"	"0.0032676056214714"	""	"0"	"0.002417"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDEELNK"	"[R].nDEELNk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"8"	"P02262"	"Histone H2A type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"Q4FZT6; Q00728; P0C169; Q64598; P0C170; A9UMV8; P02262; P0CC09"	"Histone H2A type 3 OS=Rattus norvegicus OX=10116 PE=2 SV=3; Histone H2A type 4 OS=Rattus norvegicus OX=10116 PE=2 SV=2; Histone H2A type 1-C OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A type 1-F OS=Rattus norvegicus OX=10116 PE=3 SV=3; Histone H2A type 1-E OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A.J OS=Rattus norvegicus OX=10116 GN=H2afj PE=2 SV=1; Histone H2A type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A type 2-A OS=Rattus norvegicus OX=10116 GN=Hist2h2aa3 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"660.36237"	"1319.71745"	"1319.72072"	"-2.47"	"-0.00163"	"6/64"	"6"	"64"	"2484344.29217529"	"HCD"	"MS2"	"13.21192"	"204.9"	"100.000"	"35.6663"	"9506"	"9506"	"9487"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"195.7"	""	"134.3"	""	"153.2"	""	"385.6"	""	"563.6"	"529.7"	""	"921"	"36"	"36.000"	"29.000"	"0.0118639589279969"	"29"	"0.004942"	"0.05563"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDEELNK"	"[R].nDEELNk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"8"	"P02262"	"Histone H2A type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"Q4FZT6; Q00728; P0C169; Q64598; P0C170; A9UMV8; P02262; P0CC09"	"Histone H2A type 3 OS=Rattus norvegicus OX=10116 PE=2 SV=3; Histone H2A type 4 OS=Rattus norvegicus OX=10116 PE=2 SV=2; Histone H2A type 1-C OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A type 1-F OS=Rattus norvegicus OX=10116 PE=3 SV=3; Histone H2A type 1-E OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A.J OS=Rattus norvegicus OX=10116 GN=H2afj PE=2 SV=1; Histone H2A type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A type 2-A OS=Rattus norvegicus OX=10116 GN=Hist2h2aa3 PE=1 SV=1"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"660.36304"	"1319.71880"	"1319.72072"	"-1.45"	"-0.00096"	"6/64"	"6"	"64"	"2999706.47052002"	"HCD"	"MS2"	"7.565592"	"239.4"	"100.000"	"35.5456"	"9461"	"9461"	"9447"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"218.5"	""	"148.8"	""	"164.3"	""	"449.2"	"0.3"	"687.7"	"620.1"	""	"932"	"33"	"36.000"	"29.000"	"0.0219981377228833"	"27"	"0.005921"	"0.06728"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEQAEADK"	"[R].aEQAEADk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P58775; P04692"	"Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P58775; P04692"	"Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"660.36389"	"1319.72051"	"1319.72072"	"-0.16"	"-0.00010"	"6/76"	"6"	"76"	"608218.165588379"	"HCD"	"MS2"	"14.47111"	"57.2"	"100.000"	"27.5952"	"6226"	"6226"	"6202"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.0"	""	"45.0"	""	"53.1"	""	"104.5"	""	"138.0"	"143.3"	""	"956"	"32"	"36.000"	"29.000"	"0.0308622721478566"	""	"0"	"0.003319"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DELDELK"	"[K].dELDELk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.1212"	"0.0000"	"1"	"1"	"1"	"660.37616"	"1319.74504"	"1319.74587"	"-0.63"	"-0.00041"	"6/56"	"6"	"56"	"1350095.23443604"	"HCD"	"MS2"	"33.81315"	"101.5"	"100.000"	"68.3052"	"22752"	"22752"	"22735"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.3"	""	"69.7"	""	"61.8"	""	"206.6"	""	"300.7"	"271.3"	""	"1055"	"33"	"37.000"	"30.000"	"0.0281982699581903"	""	"0.002937"	"0.02748"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DELDELK"	"[K].dELDELk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.1000"	"0.0000"	"1"	"1"	"1"	"660.37640"	"1319.74553"	"1319.74587"	"-0.26"	"-0.00017"	"6/56"	"6"	"56"	"1188695.05169678"	"HCD"	"MS2"	"30.2803"	"89.8"	"100.000"	"68.4400"	"22792"	"22792"	"22773"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.0"	""	"60.3"	""	"69.4"	""	"169.9"	""	"269.4"	"235.1"	""	"1007"	"30"	"37.000"	"30.000"	"0.0502341982134655"	""	"0.002937"	"0.02761"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEQSQK"	"[K].eLEQSQk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"660.38165"	"1319.75603"	"1319.75710"	"-0.81"	"-0.00054"	"6/62"	"6"	"62"	"521733.930053711"	"HCD"	"MS2"	"0"	"46.7"	"100.000"	"32.2653"	"8127"	"8127"	"8100"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.1"	""	"54.1"	""	"58.7"	""	"74.3"	"1.3"	"78.3"	"97.9"	""	"986"	"23"	"36.000"	"29.000"	"0.223278506892485"	"24"	"0.007147"	"0.0825"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLQEAGK"	"[K].eSLQEAGk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P53987"	"Monocarboxylate transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc16a1 PE=1 SV=1"	"P53987"	"Monocarboxylate transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc16a1 PE=1 SV=1"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"660.38171"	"1319.75615"	"1319.75710"	"-0.72"	"-0.00048"	"12/72"	"12"	"72"	"1226421.5144043"	"HCD"	"MS2"	"22.16728"	"99.0"	"100.000"	"39.1705"	"10923"	"10923"	"10899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"132.9"	""	"104.4"	""	"106.4"	""	"158.0"	"1.3"	"209.9"	"227.6"	""	"986"	"23"	"36.000"	"29.000"	"0.26536700278053"	"26"	"0.001374"	"0.01656"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLQEAGK"	"[K].eSLQEAGk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P53987"	"Monocarboxylate transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc16a1 PE=1 SV=1"	"P53987"	"Monocarboxylate transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc16a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"660.38202"	"1319.75676"	"1319.75710"	"-0.26"	"-0.00017"	"7/72"	"7"	"72"	"1308391.86712646"	"HCD"	"MS2"	"25.48307"	"101.9"	"100.000"	"38.9720"	"10851"	"10851"	"10828"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"129.2"	""	"91.1"	""	"108.3"	""	"179.8"	"1.6"	"228.3"	"230.8"	""	"948"	"27"	"36.000"	"29.000"	"0.0913646808852504"	"22"	"0.0006732"	"0.008609"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAESIDQK"	"[K].aAESIDQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8R511"	"Formin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fnbp1 PE=1 SV=2"	"Q8R511"	"Formin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fnbp1 PE=1 SV=2"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"660.38214"	"1319.75701"	"1319.75710"	"-0.07"	"-0.00005"	"7/64"	"7"	"64"	"892972.08203125"	"HCD"	"MS2"	"0"	"78.8"	"100.000"	"37.5129"	"10258"	"10258"	"10246"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"140.6"	""	"89.4"	""	"105.7"	""	"129.6"	"1.0"	"144.4"	"135.0"	""	"948"	"46"	"36.000"	"29.000"	"0.00123816448198522"	""	"0"	"0.002089"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAESIDQK"	"[K].aAESIDQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8R511"	"Formin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fnbp1 PE=1 SV=2"	"Q8R511"	"Formin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fnbp1 PE=1 SV=2"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"660.38257"	"1319.75786"	"1319.75710"	"0.57"	"0.00038"	"7/64"	"7"	"64"	"826259.937683105"	"HCD"	"MS2"	"0"	"76.8"	"100.000"	"37.6863"	"10322"	"10322"	"10309"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"150.0"	""	"90.2"	""	"90.1"	""	"122.0"	"1.4"	"131.5"	"141.2"	""	"953"	"48"	"36.000"	"29.000"	"0.000756942525706841"	""	"0"	"0.001698"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAESIDQK"	"[K].aAESIDQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8R511"	"Formin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fnbp1 PE=1 SV=2"	"Q8R511"	"Formin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fnbp1 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"660.38263"	"1319.75798"	"1319.75710"	"0.67"	"0.00044"	"7/64"	"7"	"64"	"677885.424133301"	"HCD"	"MS2"	"38.38838"	"58.3"	"100.000"	"37.1966"	"10133"	"10133"	"10104"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"76.7"	""	"66.3"	""	"78.9"	""	"99.0"	"3.1"	"110.5"	"118.7"	""	"953"	"30"	"36.000"	"29.000"	"0.044265248330064"	""	"0"	"0.003524"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEIPADLR"	"[R].yDEIPADLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07803"	"Elongation factor G, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gfm1 PE=1 SV=2"	"Q07803"	"Elongation factor G, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gfm1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"660.85364"	"1320.70000"	"1320.69970"	"0.23"	"0.00015"	"5/74"	"5"	"74"	"1108780.98516846"	"HCD"	"MS2"	"3.107923"	"52.0"	"100.000"	"72.8976"	"24609"	"24609"	"24591"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.5"	""	"73.8"	""	"73.7"	""	"74.1"	"1.9"	"95.7"	"106.1"	""	"857"	"36"	"36.000"	"29.000"	"0.0112189141902183"	"27"	"0"	"0.003273"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDMLDIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"660.85449"	"1320.70171"	"1320.70307"	"-1.03"	"-0.00068"	"7/76"	"7"	"76"	"4385279.57531738"	"HCD"	"MS2"	"0"	"174.1"	"100.000"	"91.8473"	"32127"	"32127"	"32114"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"303.2"	""	"271.2"	""	"264.1"	""	"180.8"	""	"296.5"	"333.4"	""	"865"	"69"	"36.000"	"29.000"	"6.02540317273844E-06"	""	"0"	"7.344E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDMLDIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"660.85468"	"1320.70207"	"1320.70307"	"-0.75"	"-0.00050"	"7/76"	"7"	"76"	"243489.01965332"	"HCD"	"MS2"	"25.13016"	"14.3"	"100.000"	"91.5736"	"32023"	"32023"	"32013"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.8"	""	"18.9"	""	"19.9"	""	"20.1"	""	"29.0"	"32.1"	""	"863"	"40"	"36.000"	"29.000"	"0.00399927068788189"	"27"	"0"	"0.002851"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEALMLDR"	"[K].dLEALmLDR.[S]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"660.85474"	"1320.70220"	"1320.70307"	"-0.66"	"-0.00044"	"5/78"	"5"	"78"	"438089.67175293"	"HCD"	"MS2"	"5.666859"	"19.7"	"100.000"	"78.8702"	"27029"	"27029"	"27010"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.9"	""	"21.1"	""	"24.3"	""	"34.8"	""	"34.6"	"42.9"	""	"863"	"13"	"36.000"	"29.000"	"2.07482178856058"	"20"	"0.008478"	"0.1038"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDMLDIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7246"	"0.0000"	"1"	"1"	"1"	"660.85480"	"1320.70232"	"1320.70307"	"-0.57"	"-0.00037"	"7/76"	"7"	"76"	"1753315.6439209"	"HCD"	"MS2"	"0.5335224"	"71.1"	"100.000"	"92.1124"	"32228"	"32228"	"32218"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"116.1"	""	"115.6"	""	"120.3"	""	"73.7"	""	"116.2"	"134.8"	""	"863"	"69"	"36.000"	"29.000"	"6.02532947795637E-06"	""	"0"	"3.866E-05"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDMLDIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7167"	"0.0000"	"1"	"1"	"1"	"660.85492"	"1320.70256"	"1320.70307"	"-0.38"	"-0.00025"	"7/76"	"7"	"76"	"1508143.16772461"	"HCD"	"MS2"	"0"	"68.2"	"100.000"	"92.1725"	"32260"	"32260"	"32249"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"106.3"	""	"102.4"	""	"120.8"	""	"69.8"	""	"115.6"	"135.3"	""	"863"	"60"	"36.000"	"29.000"	"4.24600792135929E-05"	""	"0"	"8.698E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEALMLDR"	"[K].dLEALmLDR.[S]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"660.85498"	"1320.70268"	"1320.70307"	"-0.29"	"-0.00019"	"6/78"	"6"	"78"	"580113.100952148"	"HCD"	"MS2"	"34.08277"	"26.3"	"100.000"	"79.6544"	"27340"	"27340"	"27328"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.6"	""	"32.8"	""	"39.8"	""	"43.5"	""	"45.9"	"53.3"	""	"851"	"7"	"36.000"	"29.000"	"7.79649786718951"	"19"	"0.008478"	"0.1034"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEALMLDR"	"[K].dLEALmLDR.[S]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"660.85516"	"1320.70305"	"1320.70307"	"-0.01"	"-0.00001"	"8/78"	"8"	"78"	"457234.354187012"	"HCD"	"MS2"	"5.302665"	"23.2"	"100.000"	"78.9142"	"27042"	"27042"	"27023"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.9"	""	"31.1"	""	"27.4"	""	"40.6"	""	"38.4"	"49.6"	""	"851"	"20"	"36.000"	"29.000"	"0.427464018763457"	"19"	"0.00447"	"0.04751"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDMLDIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"660.85541"	"1320.70354"	"1320.70307"	"0.36"	"0.00024"	"7/76"	"7"	"76"	"4958915.97467041"	"HCD"	"MS2"	"0"	"197.9"	"100.000"	"91.8803"	"32146"	"32146"	"32138"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"346.4"	""	"303.2"	""	"324.1"	""	"213.7"	""	"344.8"	"342.7"	""	"858"	"64"	"36.000"	"29.000"	"1.66516507009988E-05"	""	"0"	"8.808E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDMLDIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8103"	"0.0000"	"1"	"1"	"1"	"660.85577"	"1320.70427"	"1320.70307"	"0.91"	"0.00060"	"7/76"	"7"	"76"	"257855.476379395"	"HCD"	"MS2"	"19.09781"	"14.6"	"100.000"	"91.6106"	"32043"	"32043"	"32034"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.0"	""	"13.4"	""	"25.5"	""	"22.6"	""	"26.5"	"28.4"	""	"858"	"58"	"36.000"	"29.000"	"6.61389494315362E-05"	"27"	"0"	"0.001244"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQEGDAASK"	"[K].gQEGDAASk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"660.86182"	"1320.71636"	"1320.71596"	"0.30"	"0.00020"	"12/88"	"12"	"88"	"393200.050231934"	"HCD"	"MS2"	"0"	"33.5"	"100.000"	"23.3307"	"4507"	"4507"	"4479"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.7"	""	"24.7"	""	"20.2"	""	"79.0"	""	"90.5"	"79.2"	""	"924"	"37"	"36.000"	"29.000"	"0.00923936183770327"	"20"	"0.003111"	"0.03176"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFnDGLk.[H]"	"N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"660.87115"	"1320.73503"	"1320.73608"	"-0.80"	"-0.00053"	"7/86"	"7"	"86"	"1077720.94165039"	"HCD"	"MS2"	"13.97696"	"56.6"	"100.000"	"68.5863"	"22866"	"22866"	"22847"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.9"	""	"63.0"	""	"64.0"	""	"94.6"	"0.1"	"129.0"	"128.4"	""	"1034"	"46"	"37.000"	"30.000"	"0.00130463955937246"	"24"	"0.002547"	"0.02541"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEADGTEK"	"[K].lEADGTEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O54921"	"Exocyst complex component 2 OS=Rattus norvegicus OX=10116 GN=Exoc2 PE=1 SV=1"	"O54921"	"Exocyst complex component 2 OS=Rattus norvegicus OX=10116 GN=Exoc2 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"660.87140"	"1320.73552"	"1320.74112"	"-4.24"	"-0.00280"	"10/66"	"10"	"66"	"1104067.34851074"	"HCD"	"MS2"	"30.76315"	"98.7"	"100.000"	"41.3594"	"11822"	"11822"	"11797"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"107.1"	""	"112.2"	""	"115.2"	""	"168.9"	""	"230.2"	"206.3"	""	"1045"	"12"	"37.000"	"30.000"	"3.22913569072322"	"18"	"0.003449"	"0.03313"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDLSLPVER"	"[K].yDLSLPVER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P84850"	"D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=3 SV=1"	"P84850"	"D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=3 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"660.87164"	"1320.73601"	"1320.73608"	"-0.06"	"-0.00004"	"12/76"	"12"	"76"	"515397.487731934"	"HCD"	"MS2"	"45.08983"	"25.2"	"100.000"	"82.2764"	"28399"	"28399"	"28385"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.9"	""	"36.4"	""	"35.3"	""	"36.1"	""	"44.1"	"48.5"	""	"1039"	"15"	"37.000"	"30.000"	"1.54733928508847"	"15"	"0.002937"	"0.02772"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDLSLPVER"	"[K].yDLSLPVER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P84850"	"D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=3 SV=1"	"P84850"	"D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=3 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"660.87170"	"1320.73613"	"1320.73608"	"0.04"	"0.00002"	"6/76"	"6"	"76"	"503444.471130371"	"HCD"	"MS2"	"42.98726"	"25.0"	"100.000"	"82.2710"	"28394"	"28394"	"28376"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.9"	""	"32.0"	""	"42.1"	""	"34.3"	"0.8"	"45.1"	"47.5"	""	"1039"	"9"	"37.000"	"30.000"	"7.1876273387584"	"16"	"0.003449"	"0.0331"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEADGTEK"	"[K].lEADGTEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O54921"	"Exocyst complex component 2 OS=Rattus norvegicus OX=10116 GN=Exoc2 PE=1 SV=1"	"O54921"	"Exocyst complex component 2 OS=Rattus norvegicus OX=10116 GN=Exoc2 PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"660.87292"	"1320.73857"	"1320.74112"	"-1.93"	"-0.00127"	"5/66"	"5"	"66"	"1642917.60992432"	"HCD"	"MS2"	"39.94928"	"148.5"	"100.000"	"41.5255"	"11880"	"11880"	"11858"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"191.4"	""	"167.1"	""	"164.6"	""	"262.8"	""	"324.7"	"303.5"	""	"1048"	"30"	"37.000"	"30.000"	"0.0532514315064244"	"25"	"0.0006732"	"0.008828"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDDSVGK"	"[R].eIDDSVGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q32KJ6"	"N-acetylgalactosamine-6-sulfatase OS=Rattus norvegicus OX=10116 GN=Galns PE=1 SV=1"	"Q32KJ6"	"N-acetylgalactosamine-6-sulfatase OS=Rattus norvegicus OX=10116 GN=Galns PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"660.87360"	"1320.73992"	"1320.74112"	"-0.91"	"-0.00060"	"7/64"	"7"	"64"	"1035218.25891113"	"HCD"	"MS2"	"0"	"97.1"	"100.000"	"47.8593"	"14454"	"14454"	"14426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"164.8"	""	"125.6"	""	"111.5"	""	"170.7"	""	"166.4"	"181.7"	""	"1043"	"46"	"37.000"	"30.000"	"0.00123952220947487"	""	"0"	"0.002298"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIETGEK"	"[K].eGIETGEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"660.87360"	"1320.73992"	"1320.74112"	"-0.91"	"-0.00060"	"7/68"	"7"	"68"	"1667331.53344727"	"HCD"	"MS2"	"0"	"139.9"	"100.000"	"38.1173"	"10494"	"10494"	"10471"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"115.3"	""	"85.9"	""	"101.9"	""	"357.5"	""	"325.4"	"348.4"	""	"1043"	"46"	"37.000"	"30.000"	"0.00140040712841091"	"27"	"0"	"0.00278"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIETGEK"	"[K].eGIETGEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"660.87366"	"1320.74004"	"1320.74112"	"-0.82"	"-0.00054"	"12/68"	"12"	"68"	"1744190.32885742"	"HCD"	"MS2"	"0"	"141.4"	"100.000"	"37.9235"	"10423"	"10423"	"10401"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"110.5"	""	"83.3"	"2.6"	"99.7"	""	"372.2"	""	"349.8"	"332.6"	""	"1043"	"36"	"37.000"	"30.000"	"0.0123952220947487"	"27"	"0.0001301"	"0.004933"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDDSVGK"	"[R].eIDDSVGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q32KJ6"	"N-acetylgalactosamine-6-sulfatase OS=Rattus norvegicus OX=10116 GN=Galns PE=1 SV=1"	"Q32KJ6"	"N-acetylgalactosamine-6-sulfatase OS=Rattus norvegicus OX=10116 GN=Galns PE=1 SV=1"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"660.87408"	"1320.74089"	"1320.74112"	"-0.17"	"-0.00011"	"7/64"	"7"	"64"	"1009616.34631348"	"HCD"	"MS2"	"6.979522"	"91.0"	"100.000"	"47.5677"	"14347"	"14347"	"14317"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"139.1"	""	"105.9"	""	"115.1"	""	"165.2"	""	"150.7"	"186.3"	""	"994"	"43"	"36.000"	"29.000"	"0.00253137442915426"	""	"0"	"0.002231"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFnDGLk.[H]"	"N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"660.87451"	"1320.74175"	"1320.73608"	"4.29"	"0.00283"	"7/86"	"7"	"86"	"794826.692138672"	"HCD"	"MS2"	"100"	"44.0"	"100.000"	"68.7192"	"22906"	"22906"	"22885"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.7"	""	"49.4"	""	"52.9"	""	"75.7"	"1.2"	"99.3"	"90.1"	""	"1006"	"26"	"37.000"	"30.000"	"0.138219075901051"	"15"	"0.001886"	"0.02103"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGVDLTK"	"[R].eTGVDLTk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.5800"	"0.0000"	"1"	"1"	"1"	"660.89185"	"1320.77641"	"1320.77750"	"-0.82"	"-0.00054"	"7/68"	"7"	"68"	"3948159.7722168"	"HCD"	"MS2"	"0"	"287.8"	"100.000"	"52.8056"	"16482"	"16482"	"16465"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"441.1"	""	"332.4"	""	"364.0"	""	"498.9"	"2.9"	"504.8"	"582.5"	""	"872"	"50"	"36.000"	"29.000"	"0.000434997227826633"	""	"0.0001301"	"0.004073"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGVDLTK"	"[R].eTGVDLTk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.7115"	"0.0000"	"1"	"1"	"1"	"660.89246"	"1320.77764"	"1320.77750"	"0.10"	"0.00007"	"7/68"	"7"	"68"	"3885599.54504395"	"HCD"	"MS2"	"1.305447"	"287.6"	"100.000"	"53.0387"	"16565"	"16565"	"16547"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"437.6"	""	"345.1"	""	"367.3"	""	"481.6"	""	"529.4"	"566.6"	""	"828"	"52"	"36.000"	"29.000"	"0.000257632318060032"	""	"0"	"0.001967"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHDLVLPIR"	"[R].eHDLVLPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.9388"	"0.0000"	"1"	"1"	"1"	"440.93164"	"1320.78037"	"1320.78370"	"-2.52"	"-0.00111"	"11/68"	"11"	"68"	"3008000.35919189"	"HCD"	"MS2"	"38.31929"	"28.3"	"100.000"	"59.6954"	"19281"	"19281"	"19279"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.2"	""	"41.3"	""	"44.8"	""	"46.8"	""	"43.6"	"50.3"	""	"746"	"49"	"35.000"	"28.000"	"0.00049740349419692"	"19"	"0"	"0.0004299"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHDLVLPIR"	"[R].eHDLVLPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"440.93192"	"1320.78119"	"1320.78370"	"-1.90"	"-0.00084"	"11/68"	"11"	"68"	"2473867.96716309"	"HCD"	"MS2"	"56.95223"	"25.9"	"100.000"	"59.9406"	"19366"	"19366"	"19363"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.5"	""	"33.4"	""	"41.0"	""	"45.3"	""	"41.3"	"45.8"	""	"789"	"32"	"35.000"	"28.000"	"0.0246063392597814"	"15"	"0"	"0.0006598"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHDLVLPIR"	"[R].eHDLVLPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.9556"	"0.0000"	"1"	"1"	"1"	"440.93210"	"1320.78174"	"1320.78370"	"-1.48"	"-0.00065"	"12/68"	"12"	"68"	"9622833.00958252"	"HCD"	"MS2"	"0"	"72.7"	"100.000"	"59.9480"	"19370"	"19370"	"19365"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"120.5"	""	"91.9"	""	"98.4"	""	"118.5"	""	"117.0"	"142.9"	""	"790"	"45"	"35.000"	"28.000"	"0.00114445071714202"	"17"	"0"	"0.0002715"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHDLVLPIR"	"[R].eHDLVLPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"440.93219"	"1320.78202"	"1320.78370"	"-1.28"	"-0.00056"	"11/68"	"11"	"68"	"9519049.39703369"	"HCD"	"MS2"	"0"	"67.7"	"100.000"	"60.2005"	"19457"	"19457"	"19454"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"110.3"	""	"81.5"	""	"101.6"	""	"104.5"	""	"117.3"	"130.7"	""	"788"	"46"	"35.000"	"28.000"	"0.000947318943202733"	"18"	"0"	"0.0003145"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHDLVLPIR"	"[R].eHDLVLPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"440.93222"	"1320.78211"	"1320.78370"	"-1.21"	"-0.00053"	"11/68"	"11"	"68"	"3505256.63372803"	"HCD"	"MS2"	"0"	"41.3"	"100.000"	"60.2273"	"19475"	"19475"	"19463"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.1"	""	"44.5"	""	"59.5"	""	"58.5"	"0.5"	"83.5"	"87.6"	""	"788"	"49"	"35.000"	"28.000"	"0.000541372538154932"	"16"	"0"	"0.0004775"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHDLVLPIR"	"[R].eHDLVLPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"440.93231"	"1320.78238"	"1320.78370"	"-1.00"	"-0.00044"	"11/68"	"11"	"68"	"2924260.01043701"	"HCD"	"MS2"	"5.345364"	"35.3"	"100.000"	"60.4798"	"19562"	"19562"	"19555"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.2"	""	"38.2"	""	"56.4"	""	"57.2"	""	"63.4"	"69.3"	""	"787"	"40"	"35.000"	"28.000"	"0.00409208585253735"	"15"	"0"	"0.0005496"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLAEDIMR"	"[R].dNLAEDImR.[L]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"661.33350"	"1321.65972"	"1321.66193"	"-1.68"	"-0.00111"	"7/88"	"7"	"88"	"296253.3515625"	"HCD"	"MS2"	"25.90696"	"17.4"	"100.000"	"65.1482"	"21466"	"21466"	"21437"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.9"	""	"23.9"	""	"29.6"	""	"23.7"	"0.6"	"28.7"	"40.4"	""	"550"	"18"	"34.000"	"27.000"	"0.411464805425969"	"23"	"0.002056"	"0.02257"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLAEDIMR"	"[R].dNLAEDImR.[L]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"661.33453"	"1321.66179"	"1321.66193"	"-0.11"	"-0.00007"	"10/88"	"10"	"88"	"288434.233093262"	"HCD"	"MS2"	"19.95941"	"21.3"	"100.000"	"67.7698"	"22534"	"22534"	"22513"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.0"	""	"25.7"	""	"26.8"	""	"32.6"	""	"41.8"	"49.3"	""	"572"	"14"	"34.000"	"27.000"	"1.05770859417156"	"21"	"0.004542"	"0.04897"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLAEDIMR"	"[R].dNLAEDImR.[L]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"661.33466"	"1321.66203"	"1321.66193"	"0.08"	"0.00005"	"7/88"	"7"	"88"	"280887.079406738"	"HCD"	"MS2"	"0"	"20.1"	"100.000"	"67.9514"	"22593"	"22593"	"22569"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.2"	""	"24.9"	""	"26.2"	""	"34.9"	""	"37.1"	"41.6"	""	"572"	"12"	"34.000"	"27.000"	"1.66481520282469"	"20"	"0.004022"	"0.04274"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLAEDIMR"	"[R].dNLAEDImR.[L]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"661.33472"	"1321.66216"	"1321.66193"	"0.17"	"0.00011"	"6/88"	"6"	"88"	"293387.739379883"	"HCD"	"MS2"	"26.34861"	"20.0"	"100.000"	"65.4222"	"21562"	"21562"	"21533"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.2"	""	"20.9"	""	"35.0"	""	"20.5"	"0.9"	"44.6"	"40.0"	""	"574"	"15"	"34.000"	"27.000"	"0.837301553018336"	"19"	"0.003922"	"0.04011"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLAEDIMR"	"[R].dNLAEDImR.[L]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"661.33484"	"1321.66240"	"1321.66193"	"0.36"	"0.00023"	"7/88"	"7"	"88"	"236117.623535156"	"HCD"	"MS2"	"0"	"17.4"	"100.000"	"64.5081"	"21210"	"21210"	"21183"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.7"	""	"18.5"	""	"28.8"	""	"25.3"	""	"32.3"	"38.0"	""	"582"	"46"	"34.000"	"27.000"	"0.000751437715474667"	""	"0"	"0.003294"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLAEDIMR"	"[R].dNLAEDImR.[L]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"661.33484"	"1321.66240"	"1321.66193"	"0.36"	"0.00023"	"6/88"	"6"	"88"	"353117.324707031"	"HCD"	"MS2"	"60.87274"	"24.4"	"100.000"	"67.4147"	"22390"	"22390"	"22363"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.0"	""	"28.1"	""	"31.8"	""	"34.6"	""	"47.6"	"52.7"	""	"582"	"10"	"34.000"	"27.000"	"2.77902842532238"	"18"	"0.008641"	"0.1068"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLAEDIMR"	"[R].dNLAEDImR.[L]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"661.33514"	"1321.66301"	"1321.66193"	"0.82"	"0.00054"	"6/88"	"6"	"88"	"315371.584960938"	"HCD"	"MS2"	"49.61008"	"22.1"	"100.000"	"67.6146"	"22456"	"22456"	"22430"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.9"	""	"23.2"	""	"31.3"	""	"36.3"	"1.1"	"46.8"	"42.1"	""	"583"	"6"	"34.000"	"27.000"	"6.69327330924754"	"18"	"0.008052"	"0.09831"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLAEDIMR"	"[R].dNLAEDImR.[L]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"661.33563"	"1321.66399"	"1321.66193"	"1.56"	"0.00103"	"6/88"	"6"	"88"	"235936.122619629"	"HCD"	"MS2"	"17.24013"	"17.4"	"100.000"	"64.5254"	"21203"	"21203"	"21177"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.7"	""	"26.0"	""	"23.8"	""	"25.1"	""	"30.6"	"36.6"	""	"589"	"23"	"34.000"	"27.000"	"0.138702822623903"	"21"	"0.001374"	"0.01802"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLAEDIMR"	"[R].dNLAEDImR.[L]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.2143"	"0.0000"	"1"	"1"	"1"	"661.33588"	"1321.66448"	"1321.66193"	"1.93"	"0.00127"	"11/88"	"11"	"88"	"332169.971008301"	"HCD"	"MS2"	"34.37317"	"21.0"	"100.000"	"64.1936"	"21068"	"21068"	"21043"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.3"	""	"27.1"	""	"31.3"	""	"35.1"	""	"38.1"	"42.1"	""	"599"	"14"	"34.000"	"27.000"	"1.32555217522607"	"24"	"0.003449"	"0.0337"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPYPTDVAR"	"[R].sSPYPTDVAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"661.34875"	"1321.69023"	"1321.69495"	"-3.57"	"-0.00236"	"9/84"	"9"	"84"	"4938897.62805176"	"HCD"	"MS2"	"39.37956"	"242.3"	"100.000"	"39.7016"	"11139"	"11139"	"11117"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"392.0"	""	"324.2"	""	"297.1"	""	"344.8"	""	"464.2"	"476.4"	""	"763"	"44"	"35.000"	"28.000"	"0.00143052200356652"	"23"	"0"	"8.119E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPYPTDVAR"	"[R].sSPYPTDVAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"661.34882"	"1321.69036"	"1321.69495"	"-3.47"	"-0.00230"	"9/84"	"9"	"84"	"4280003.5368042"	"HCD"	"MS2"	"31.8376"	"209.8"	"100.000"	"39.4801"	"11058"	"11058"	"11037"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"330.2"	""	"300.2"	""	"241.4"	""	"315.9"	""	"403.8"	"397.5"	""	"763"	"37"	"35.000"	"28.000"	"0.00757695210971837"	"21"	"0.0003538"	"0.007438"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPYPTDVAR"	"[R].sSPYPTDVAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"661.35046"	"1321.69365"	"1321.69495"	"-0.98"	"-0.00065"	"9/84"	"9"	"84"	"3318463.14483643"	"HCD"	"MS2"	"0"	"153.1"	"100.000"	"39.7673"	"11175"	"11175"	"11156"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"238.3"	""	"204.0"	""	"191.0"	""	"234.7"	""	"303.8"	"280.7"	""	"795"	"37"	"35.000"	"29.000"	"0.0073339362912384"	"22"	"0.0003538"	"0.007085"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPYPTDVAR"	"[R].sSPYPTDVAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"661.35071"	"1321.69414"	"1321.69495"	"-0.61"	"-0.00040"	"9/84"	"9"	"84"	"2446151.13818359"	"HCD"	"MS2"	"0"	"134.5"	"100.000"	"40.0027"	"11262"	"11262"	"11241"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"217.0"	""	"181.4"	""	"176.2"	""	"197.1"	""	"249.2"	"256.3"	""	"825"	"38"	"36.000"	"29.000"	"0.00620046061012134"	"20"	"0"	"0.0002316"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSTEEIVQR"	"[K].mSTEEIVQR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"661.35168"	"1321.69609"	"1321.69832"	"-1.68"	"-0.00111"	"7/72"	"7"	"72"	"1065460.24468994"	"HCD"	"MS2"	"25.31565"	"69.9"	"100.000"	"47.3991"	"14266"	"14266"	"14241"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"101.1"	""	"103.5"	""	"106.6"	""	"87.9"	"0.1"	"123.2"	"139.4"	""	"832"	"24"	"36.000"	"29.000"	"0.152438031053499"	"18"	"0"	"0.001461"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSTEEIVQR"	"[K].mSTEEIVQR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"661.35248"	"1321.69768"	"1321.69832"	"-0.48"	"-0.00032"	"7/72"	"7"	"72"	"948284.128112793"	"HCD"	"MS2"	"20.55669"	"79.4"	"100.000"	"47.4780"	"14310"	"14310"	"14286"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"126.5"	""	"86.2"	""	"112.7"	""	"120.6"	""	"141.2"	"171.8"	""	"876"	"15"	"36.000"	"29.000"	"1.47731841192585"	"18"	"0.0008629"	"0.01057"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSTEEIVQR"	"[K].mSTEEIVQR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"661.35315"	"1321.69902"	"1321.69832"	"0.53"	"0.00035"	"6/72"	"6"	"72"	"1042348.3270874"	"HCD"	"MS2"	"6.229725"	"75.7"	"100.000"	"47.6936"	"14386"	"14386"	"14369"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"117.6"	""	"97.2"	""	"107.3"	""	"97.8"	"0.3"	"148.4"	"149.0"	""	"890"	"30"	"36.000"	"29.000"	"0.0400276423780866"	"21"	"0"	"0.001118"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDEMNGK"	"[K].aVDEMNGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"661.36292"	"1321.71855"	"1321.71861"	"-0.04"	"-0.00003"	"6/62"	"6"	"62"	"1596399.45001221"	"HCD"	"MS2"	"46.10041"	"128.4"	"100.000"	"40.8647"	"11613"	"11613"	"11586"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"226.2"	""	"153.8"	""	"182.3"	""	"179.7"	""	"243.5"	"232.2"	""	"972"	"30"	"36.000"	"29.000"	"0.0447338491872041"	"29"	"0.0008629"	"0.009694"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDEMNGK"	"[K].aVDEMNGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"661.36346"	"1321.71965"	"1321.71861"	"0.79"	"0.00052"	"7/62"	"7"	"62"	"1852981.21179199"	"HCD"	"MS2"	"37.87144"	"156.1"	"100.000"	"40.7080"	"11559"	"11559"	"11535"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"279.6"	""	"179.8"	""	"204.2"	""	"234.9"	""	"290.9"	"291.7"	""	"984"	"36"	"36.000"	"29.000"	"0.0134885449258852"	""	"0.0003538"	"0.00707"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPVYDTTIR"	"[K].qPVYDTTIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"661.36768"	"1321.72807"	"1321.73133"	"-2.46"	"-0.00163"	"8/84"	"8"	"84"	"2477034.17907715"	"HCD"	"MS2"	"22.28653"	"156.5"	"100.000"	"46.5651"	"13938"	"13938"	"13923"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"228.2"	""	"209.0"	""	"152.2"	""	"271.3"	""	"318.5"	"309.2"	""	"943"	"18"	"36.000"	"29.000"	"0.691005807010713"	"20"	"0.002973"	"0.03032"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPVYDTTIR"	"[K].qPVYDTTIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"661.36877"	"1321.73027"	"1321.73133"	"-0.80"	"-0.00053"	"5/84"	"5"	"84"	"913559.862426758"	"HCD"	"MS2"	"33.85892"	"58.2"	"100.000"	"46.3956"	"13870"	"13870"	"13849"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"77.6"	""	"60.4"	""	"67.6"	""	"103.7"	"0.6"	"125.9"	"117.1"	""	"1006"	"27"	"37.000"	"30.000"	"0.0951848840178422"	"18"	"0"	"0.001191"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFITAEELR"	"[K].nFITAEELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.8689"	"0.0000"	"1"	"1"	"1"	"661.36890"	"1321.73052"	"1321.73133"	"-0.62"	"-0.00041"	"7/86"	"7"	"86"	"1965484.41174316"	"HCD"	"MS2"	"40.63943"	"100.3"	"100.000"	"72.7857"	"24578"	"24578"	"24561"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"125.7"	""	"134.0"	""	"117.4"	""	"169.6"	""	"194.5"	"212.4"	""	"1004"	"61"	"37.000"	"30.000"	"4.32218863596669E-05"	"24"	"0"	"0.000496"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFITAEELR"	"[K].nFITAEELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.8361"	"0.0000"	"1"	"1"	"1"	"661.36902"	"1321.73076"	"1321.73133"	"-0.43"	"-0.00029"	"7/86"	"7"	"86"	"4572597.04022217"	"HCD"	"MS2"	"0.3281619"	"206.6"	"100.000"	"73.2251"	"24743"	"24743"	"24731"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"262.5"	""	"234.3"	""	"207.1"	""	"333.5"	""	"456.7"	"472.0"	""	"1006"	"61"	"37.000"	"30.000"	"3.94065110311404E-05"	"27"	"0"	"0.0002646"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFITAEELR"	"[K].nFITAEELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.8689"	"0.0000"	"1"	"1"	"1"	"661.36908"	"1321.73088"	"1321.73133"	"-0.34"	"-0.00022"	"7/86"	"7"	"86"	"2409858.40020752"	"HCD"	"MS2"	"31.10312"	"120.6"	"100.000"	"72.9368"	"24625"	"24625"	"24607"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"152.6"	""	"138.0"	""	"141.1"	""	"212.4"	""	"243.4"	"257.3"	""	"1006"	"61"	"37.000"	"30.000"	"4.401168389394E-05"	"24"	"0"	"0.0006744"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFITAEELR"	"[K].nFITAEELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.8361"	"0.0000"	"1"	"1"	"1"	"661.36914"	"1321.73100"	"1321.73133"	"-0.25"	"-0.00016"	"7/86"	"7"	"86"	"5376995.89379883"	"HCD"	"MS2"	"0"	"233.8"	"100.000"	"73.0670"	"24692"	"24692"	"24680"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"300.9"	""	"255.6"	""	"244.3"	""	"361.3"	""	"516.9"	"546.9"	""	"997"	"61"	"36.000"	"29.000"	"3.95061913244515E-05"	"27"	"0"	"0.0002985"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPVYDTTIR"	"[K].qPVYDTTIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"661.37024"	"1321.73320"	"1321.73133"	"1.42"	"0.00094"	"12/84"	"12"	"84"	"733178.743530273"	"HCD"	"MS2"	"0"	"51.4"	"100.000"	"46.5907"	"13938"	"13938"	"13914"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"72.4"	""	"55.8"	""	"55.2"	""	"86.3"	"1.3"	"110.6"	"107.0"	""	"965"	"22"	"36.000"	"29.000"	"0.275738442194176"	"15"	"0.000936"	"0.01176"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSEQESVK"	"[K].gSEQESVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"1"	"661.37134"	"1321.73540"	"1321.73637"	"-0.73"	"-0.00048"	"7/72"	"7"	"72"	"1674662.73895264"	"HCD"	"MS2"	"39.61057"	"134.5"	"100.000"	"26.5599"	"5822"	"5822"	"5796"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"216.5"	""	"146.9"	""	"180.2"	""	"233.3"	""	"248.1"	"249.8"	""	"960"	"34"	"36.000"	"29.000"	"0.0189339504996134"	""	"0.0008629"	"0.009695"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AETSQAEK"	"[K].aETSQAEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"661.37146"	"1321.73564"	"1321.73637"	"-0.55"	"-0.00036"	"7/72"	"7"	"72"	"754551.425048828"	"HCD"	"MS2"	"0"	"64.0"	"100.000"	"24.3424"	"4913"	"4913"	"4898"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"110.7"	""	"68.0"	""	"74.2"	""	"105.0"	""	"122.0"	"131.9"	""	"960"	"46"	"36.000"	"29.000"	"0.0012252966252774"	""	"0"	"0.001697"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSEQESVK"	"[K].gSEQESVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"661.37146"	"1321.73564"	"1321.73637"	"-0.55"	"-0.00036"	"5/72"	"5"	"72"	"1665038.94976807"	"HCD"	"MS2"	"41.23674"	"127.6"	"100.000"	"26.6318"	"5835"	"5835"	"5810"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"195.8"	""	"147.8"	""	"148.6"	""	"211.3"	""	"243.2"	"264.7"	""	"960"	"31"	"36.000"	"29.000"	"0.0366641176117291"	"28"	"0.0008629"	"0.01114"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AETSQAEK"	"[K].aETSQAEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"661.37219"	"1321.73711"	"1321.73637"	"0.56"	"0.00037"	"7/72"	"7"	"72"	"758605.323242188"	"HCD"	"MS2"	"0"	"66.1"	"100.000"	"24.2564"	"4894"	"4894"	"4873"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.7"	""	"66.6"	""	"83.2"	""	"113.7"	""	"125.1"	"135.6"	""	"915"	"43"	"36.000"	"29.000"	"0.00250836711451291"	""	"0"	"0.00202"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHIEIGPDGR"	"[R].vHIEIGPDGR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3;Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"3"	"3"	"0.6842"	"0.0000"	"1"	"1"	"1"	"441.25165"	"1321.74039"	"1321.74256"	"-1.65"	"-0.00072"	"7/80"	"7"	"80"	"4303436.51367188"	"HCD"	"MS2"	"10.57217"	"42.0"	"100.000"	"48.6947"	"14806"	"14806"	"14783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.0"	""	"50.4"	""	"53.6"	""	"81.7"	""	"80.4"	"77.5"	""	"896"	"38"	"36.000"	"29.000"	"0.00662640557899357"	"27"	"0"	"0.0009086"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHIEIGPDGR"	"[R].vHIEIGPDGR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3;Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"3"	"3"	"0.8085"	"0.0000"	"1"	"1"	"1"	"441.25168"	"1321.74048"	"1321.74256"	"-1.58"	"-0.00069"	"11/80"	"11"	"80"	"35475510.7714844"	"HCD"	"MS2"	"1.940159"	"49.6"	"24.759"	"48.9731"	"14920"	"14920"	"14906"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.5"	""	"64.1"	""	"57.3"	""	"95.2"	""	"99.6"	"86.8"	""	"897"	"47"	"36.000"	"29.000"	"0.000905237314111179"	"25"	"0"	"9.789E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVGPELHDR"	"[K].gLVGPELHDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.7800"	"0.0000"	"1"	"1"	"1"	"441.25183"	"1321.74094"	"1321.74256"	"-1.23"	"-0.00054"	"8/78"	"8"	"78"	"4648662.41656494"	"HCD"	"MS2"	"3.136694"	"105.9"	"100.000"	"40.7267"	"11566"	"11566"	"11546"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"161.3"	""	"143.1"	""	"155.0"	""	"138.8"	""	"195.0"	"212.6"	""	"891"	"50"	"36.000"	"29.000"	"0.000399804527950084"	"27"	"0"	"0.002123"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHIEIGPDGR"	"[R].vHIEIGPDGR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3;Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"3"	"3"	"0.7556"	"0.0000"	"1"	"1"	"1"	"441.25195"	"1321.74131"	"1321.74256"	"-0.95"	"-0.00042"	"7/80"	"7"	"80"	"2944614.42138672"	"HCD"	"MS2"	"2.899502"	"33.9"	"100.000"	"49.2609"	"15037"	"15037"	"15020"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.8"	""	"42.8"	""	"43.0"	""	"59.0"	"1.1"	"63.4"	"66.0"	""	"959"	"45"	"36.000"	"29.000"	"0.0013924788628157"	"26"	"0"	"0.0001748"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVGPELHDR"	"[K].gLVGPELHDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.7843"	"0.0000"	"1"	"1"	"1"	"441.25208"	"1321.74167"	"1321.74256"	"-0.68"	"-0.00030"	"8/78"	"8"	"78"	"2222324.59075928"	"HCD"	"MS2"	"27.88702"	"46.5"	"100.000"	"40.4181"	"11441"	"11441"	"11414"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.5"	""	"66.9"	""	"78.3"	""	"68.4"	""	"73.2"	"98.1"	""	"947"	"51"	"36.000"	"29.000"	"0.000407680541659408"	"27"	"0"	"0.001814"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVGPELHDR"	"[K].gLVGPELHDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.7455"	"0.0000"	"1"	"1"	"1"	"441.25208"	"1321.74167"	"1321.74256"	"-0.68"	"-0.00030"	"8/78"	"8"	"78"	"5425540.61737061"	"HCD"	"MS2"	"4.010499"	"105.1"	"100.000"	"40.8789"	"11618"	"11618"	"11598"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"148.3"	""	"136.4"	""	"154.4"	""	"155.3"	"0.3"	"198.7"	"203.0"	""	"947"	"55"	"36.000"	"29.000"	"0.000138458615090882"	""	"0"	"0.0001988"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHIEIGPDGR"	"[R].vHIEIGPDGR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3;Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"3"	"3"	"0.8085"	"0.0000"	"1"	"1"	"1"	"441.25223"	"1321.74213"	"1321.74256"	"-0.33"	"-0.00014"	"7/80"	"7"	"80"	"4377758.48236084"	"HCD"	"MS2"	"21.66443"	"40.9"	"100.000"	"49.0732"	"14948"	"14948"	"14918"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.4"	""	"49.8"	""	"51.7"	""	"78.4"	"1.1"	"81.7"	"73.5"	""	"946"	"47"	"36.000"	"29.000"	"0.000911719283939312"	"24"	"0"	"5.633E-05"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVGPELHDR"	"[K].gLVGPELHDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"441.25229"	"1321.74231"	"1321.74256"	"-0.19"	"-0.00008"	"12/78"	"12"	"78"	"1624698.99188232"	"HCD"	"MS2"	"58.674"	"44.6"	"100.000"	"40.5797"	"11497"	"11497"	"11482"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.4"	""	"64.1"	""	"72.6"	""	"64.3"	"2.5"	"68.3"	"87.7"	""	"945"	"44"	"36.000"	"29.000"	"0.00185524731976311"	"25"	"0"	"0.0002629"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHIEIGPDGR"	"[R].vHIEIGPDGR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3;Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"3"	"3"	"0.7234"	"0.0000"	"1"	"1"	"1"	"441.25266"	"1321.74341"	"1321.74256"	"0.64"	"0.00028"	"7/80"	"7"	"80"	"31558229.6665039"	"HCD"	"MS2"	"2.150307"	"57.5"	"34.854"	"49.3815"	"15074"	"15074"	"15059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"73.8"	""	"69.1"	""	"77.6"	""	"107.6"	""	"111.4"	"109.4"	""	"921"	"47"	"36.000"	"29.000"	"0.000820785422409845"	"29"	"0"	"0.0001468"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADLSEAANR"	"[K].fADLSEAANR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.8542"	"0.0000"	"1"	"1"	"1"	"441.56757"	"1322.68814"	"1322.69019"	"-1.55"	"-0.00068"	"10/80"	"10"	"80"	"940437.984924316"	"HCD"	"MS2"	"44.02785"	"21.8"	"100.000"	"62.1204"	"20241"	"20241"	"20217"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.1"	""	"24.7"	""	"25.4"	""	"36.3"	"0.2"	"45.1"	"47.6"	""	"767"	"48"	"35.000"	"28.000"	"0.000657302627429481"	"23"	"0"	"0.0006683"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQYEEIANR"	"[R].aQYEEIANR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"661.84778"	"1322.68828"	"1322.69019"	"-1.45"	"-0.00096"	"7/80"	"7"	"80"	"3652936.35443115"	"HCD"	"MS2"	"38.02205"	"226.6"	"100.000"	"41.0737"	"11697"	"11697"	"11685"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"383.0"	""	"280.9"	""	"300.9"	""	"305.2"	"0.3"	"431.8"	"444.9"	""	"767"	"29"	"35.000"	"28.000"	"0.0505551459236382"	"24"	"0"	"0.001625"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQYEEIANR"	"[R].aQYEEIANR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"661.84802"	"1322.68877"	"1322.69019"	"-1.08"	"-0.00071"	"7/80"	"7"	"80"	"1555720.99719238"	"HCD"	"MS2"	"0"	"98.0"	"100.000"	"41.1852"	"11751"	"11751"	"11738"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"151.2"	""	"107.5"	""	"130.1"	""	"150.7"	"1.6"	"184.8"	"202.9"	""	"753"	"33"	"35.000"	"28.000"	"0.0185679937189033"	"23"	"0"	"0.001009"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQYEEIANR"	"[R].aQYEEIANR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"661.84808"	"1322.68889"	"1322.69019"	"-0.99"	"-0.00065"	"7/80"	"7"	"80"	"1212706.25524902"	"HCD"	"MS2"	"0"	"81.9"	"100.000"	"41.3855"	"11823"	"11823"	"11802"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"123.8"	""	"87.4"	""	"104.6"	""	"131.4"	"3.0"	"153.3"	"173.2"	""	"765"	"34"	"35.000"	"28.000"	"0.0142439827642373"	"22"	"0"	"0.001378"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADLSEAANR"	"[K].fADLSEAANR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9219"	"0.0000"	"1"	"1"	"1"	"661.84808"	"1322.68889"	"1322.69019"	"-0.99"	"-0.00065"	"8/80"	"8"	"80"	"6083329.15014648"	"HCD"	"MS2"	"3.265352"	"279.8"	"100.000"	"62.3518"	"20317"	"20317"	"20305"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"368.5"	""	"377.6"	""	"355.7"	""	"389.4"	""	"552.3"	"615.2"	""	"765"	"64"	"35.000"	"28.000"	"1.48809767960313E-05"	"21"	"0"	"2.571E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADLSEAANR"	"[K].fADLSEAANR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"441.56784"	"1322.68897"	"1322.69019"	"-0.93"	"-0.00041"	"12/80"	"12"	"80"	"892105.632263184"	"HCD"	"MS2"	"23.39614"	"22.9"	"100.000"	"62.3060"	"20299"	"20299"	"20284"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.8"	""	"33.0"	""	"37.1"	""	"36.5"	""	"37.7"	"43.6"	""	"794"	"44"	"35.000"	"28.000"	"0.00170919064365209"	"19"	"0"	"0.001261"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADLSEAANR"	"[K].fADLSEAANR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"661.84827"	"1322.68926"	"1322.69019"	"-0.71"	"-0.00047"	"8/80"	"8"	"80"	"2723783.47875977"	"HCD"	"MS2"	"0"	"150.2"	"100.000"	"61.9326"	"20166"	"20166"	"20153"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"179.1"	""	"190.9"	""	"178.6"	""	"204.2"	""	"298.0"	"381.9"	""	"790"	"43"	"35.000"	"28.000"	"0.00178072598293877"	"17"	"0"	"8.252E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADLSEAANR"	"[K].fADLSEAANR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9508"	"0.0000"	"1"	"1"	"1"	"661.84827"	"1322.68926"	"1322.69019"	"-0.71"	"-0.00047"	"8/80"	"8"	"80"	"7198077.86975098"	"HCD"	"MS2"	"4.162089"	"330.1"	"100.000"	"62.1940"	"20270"	"20270"	"20263"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"461.6"	""	"466.4"	""	"400.8"	""	"454.1"	""	"627.3"	"721.9"	""	"790"	"61"	"35.000"	"28.000"	"2.81576946899975E-05"	"19"	"0"	"6.349E-05"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQYEEIANR"	"[R].aQYEEIANR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"661.84875"	"1322.69023"	"1322.69019"	"0.03"	"0.00002"	"7/80"	"7"	"80"	"3677685.52911377"	"HCD"	"MS2"	"54.42102"	"237.3"	"100.000"	"40.8802"	"11628"	"11628"	"11619"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"393.6"	""	"284.4"	""	"309.2"	""	"324.7"	""	"457.4"	"483.1"	""	"770"	"27"	"35.000"	"28.000"	"0.0787881185138999"	"23"	"0"	"0.002012"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADLSEAANR"	"[K].fADLSEAANR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"661.84894"	"1322.69060"	"1322.69019"	"0.31"	"0.00020"	"8/80"	"8"	"80"	"805368.144897461"	"HCD"	"MS2"	"9.180831"	"54.5"	"100.000"	"62.4971"	"20392"	"20392"	"20375"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.4"	""	"73.6"	""	"65.1"	""	"83.9"	"0.7"	"102.3"	"120.0"	""	"774"	"60"	"35.000"	"28.000"	"3.67884055144981E-05"	"21"	"0"	"3.249E-05"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADLSEAANR"	"[K].fADLSEAANR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"661.84900"	"1322.69072"	"1322.69019"	"0.40"	"0.00026"	"8/80"	"8"	"80"	"597120.519226074"	"HCD"	"MS2"	"21.76842"	"43.3"	"100.000"	"62.6758"	"20449"	"20449"	"20427"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.3"	""	"55.8"	""	"49.0"	""	"65.8"	""	"92.8"	"95.3"	""	"774"	"33"	"35.000"	"28.000"	"0.019939348545314"	"16"	"0"	"0.0005523"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADLSEAANR"	"[K].fADLSEAANR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"661.84955"	"1322.69182"	"1322.69019"	"1.23"	"0.00081"	"7/80"	"7"	"80"	"2667219.62585449"	"HCD"	"MS2"	"0"	"159.0"	"100.000"	"62.0679"	"20205"	"20205"	"20195"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"184.9"	""	"210.0"	""	"180.0"	""	"230.7"	""	"317.4"	"394.6"	""	"770"	"42"	"35.000"	"28.000"	"0.00234131975492306"	"17"	"0"	"8.836E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGTDEEK"	"[K].wGTDEEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.1000"	"0.0000"	"1"	"1"	"1"	"661.85382"	"1322.70036"	"1322.69925"	"0.84"	"0.00056"	"12/54"	"12"	"54"	"1874632.51287842"	"HCD"	"MS2"	"11.08627"	"179.2"	"100.000"	"49.1194"	"14967"	"14967"	"14950"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"242.3"	""	"163.3"	""	"206.4"	""	"307.5"	"0.4"	"367.8"	"414.8"	""	"873"	"20"	"36.000"	"29.000"	"0.427547378630897"	""	"0.008641"	"0.1068"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGTDEEK"	"[K].wGTDEEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.1304"	"0.0000"	"1"	"1"	"1"	"661.85382"	"1322.70036"	"1322.69925"	"0.84"	"0.00056"	"10/54"	"10"	"54"	"2670403.76837158"	"HCD"	"MS2"	"16.60086"	"233.0"	"100.000"	"48.2018"	"14605"	"14605"	"14578"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"374.3"	""	"231.4"	""	"244.9"	""	"471.1"	"0.5"	"419.8"	"466.9"	""	"873"	"23"	"36.000"	"29.000"	"0.229606536779543"	""	"0.00736"	"0.08654"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"WGTDEEK"	"[K].wGTDEEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"661.85419"	"1322.70110"	"1322.69925"	"1.40"	"0.00092"	"12/54"	"12"	"54"	"1334834.0637207"	"HCD"	"MS2"	"26.1782"	"118.3"	"100.000"	"48.5045"	"14716"	"14716"	"14686"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"194.3"	""	"114.9"	""	"122.7"	""	"247.1"	""	"208.0"	"234.9"	""	"868"	"22"	"36.000"	"29.000"	"0.256147268794581"	""	"0.005183"	"0.05888"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDEMNGK"	"[K].aVDEMnGk.[E]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"661.85553"	"1322.70378"	"1322.70262"	"0.88"	"0.00058"	"7/62"	"7"	"62"	"1068275.9006958"	"HCD"	"MS2"	"12.40399"	"88.4"	"100.000"	"45.3143"	"13418"	"13418"	"13387"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"132.1"	""	"93.5"	""	"103.8"	""	"147.8"	""	"182.2"	"186.7"	""	"886"	"35"	"36.000"	"29.000"	"0.0138804557587181"	"29"	"0.0002479"	"0.005438"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDEMNGK"	"[K].aVDEMnGk.[E]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"661.85571"	"1322.70415"	"1322.70262"	"1.15"	"0.00076"	"7/62"	"7"	"62"	"911027.627380371"	"HCD"	"MS2"	"32.19837"	"81.1"	"100.000"	"45.1209"	"13350"	"13350"	"13319"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"129.6"	""	"88.5"	""	"87.2"	""	"126.7"	""	"178.6"	"159.5"	""	"892"	"46"	"36.000"	"29.000"	"0.00114903923602315"	"25"	"0"	"0.002322"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLVLDEADR"	"[K].yLVLDEADR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64060"	"Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus OX=10116 GN=Ddx4 PE=1 SV=1"	"Q64060"	"Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus OX=10116 GN=Ddx4 PE=1 SV=1"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"661.86023"	"1322.71318"	"1322.71535"	"-1.64"	"-0.00108"	"12/70"	"12"	"70"	"773196.327758789"	"HCD"	"MS2"	"0"	"43.5"	"100.000"	"73.8662"	"25003"	"25003"	"24978"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.5"	""	"65.6"	""	"57.2"	""	"71.4"	""	"79.1"	"80.7"	""	"960"	"41"	"36.000"	"29.000"	"0.00419992212109169"	"25"	"0"	"0.0004782"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLVLDEADR"	"[K].yLVLDEADR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64060"	"Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus OX=10116 GN=Ddx4 PE=1 SV=1"	"Q64060"	"Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus OX=10116 GN=Ddx4 PE=1 SV=1"	"0"	"2"	"2"	"0.7925"	"0.0000"	"1"	"1"	"1"	"661.86072"	"1322.71416"	"1322.71535"	"-0.90"	"-0.00059"	"13/70"	"13"	"70"	"1107489.4541626"	"HCD"	"MS2"	"4.561333"	"58.7"	"100.000"	"73.7635"	"24974"	"24974"	"24955"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.3"	""	"72.8"	""	"70.2"	""	"89.7"	"1.2"	"111.5"	"120.1"	""	"963"	"53"	"36.000"	"29.000"	"0.000262178027343626"	"27"	"0"	"0.000263"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAFTLEER"	"[K].dLAFTLEER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P13697"	"NADP-dependent malic enzyme OS=Rattus norvegicus OX=10116 GN=Me1 PE=1 SV=2"	"P13697"	"NADP-dependent malic enzyme OS=Rattus norvegicus OX=10116 GN=Me1 PE=1 SV=2"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"661.86078"	"1322.71428"	"1322.71535"	"-0.81"	"-0.00053"	"7/78"	"7"	"78"	"390032.12512207"	"HCD"	"MS2"	"4.467582"	"22.2"	"100.000"	"83.5318"	"28891"	"28891"	"28880"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.6"	""	"29.0"	""	"28.7"	""	"32.3"	"0.8"	"40.9"	"37.6"	""	"963"	"47"	"36.000"	"29.000"	"0.000938850174783499"	"25"	"0"	"0.0005362"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAFTLEER"	"[K].dLAFTLEER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P13697"	"NADP-dependent malic enzyme OS=Rattus norvegicus OX=10116 GN=Me1 PE=1 SV=2"	"P13697"	"NADP-dependent malic enzyme OS=Rattus norvegicus OX=10116 GN=Me1 PE=1 SV=2"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"661.86096"	"1322.71465"	"1322.71535"	"-0.53"	"-0.00035"	"7/78"	"7"	"78"	"506774.701782227"	"HCD"	"MS2"	"0"	"28.0"	"100.000"	"83.5985"	"28915"	"28915"	"28896"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.9"	""	"30.5"	""	"37.2"	""	"46.0"	""	"48.9"	"59.5"	""	"963"	"34"	"36.000"	"29.000"	"0.0198882372208263"	"23"	"0"	"0.003078"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLVLDEADR"	"[K].yLVLDEADR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64060"	"Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus OX=10116 GN=Ddx4 PE=1 SV=1"	"Q64060"	"Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus OX=10116 GN=Ddx4 PE=1 SV=1"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"661.86115"	"1322.71501"	"1322.71535"	"-0.25"	"-0.00017"	"7/70"	"7"	"70"	"1657511.97509766"	"HCD"	"MS2"	"3.434589"	"79.7"	"100.000"	"74.0516"	"25091"	"25091"	"25076"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"119.4"	""	"82.4"	""	"103.8"	""	"129.0"	"0.7"	"160.2"	"160.6"	""	"959"	"47"	"36.000"	"29.000"	"0.000934950485583982"	"25"	"0"	"0.0001946"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLVLDEADR"	"[K].yLVLDEADR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64060"	"Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus OX=10116 GN=Ddx4 PE=1 SV=1"	"Q64060"	"Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus OX=10116 GN=Ddx4 PE=1 SV=1"	"0"	"2"	"2"	"0.8070"	"0.0000"	"1"	"1"	"1"	"661.86115"	"1322.71501"	"1322.71535"	"-0.25"	"-0.00017"	"14/70"	"14"	"70"	"1771201.96295166"	"HCD"	"MS2"	"3.614983"	"86.5"	"100.000"	"74.1752"	"25128"	"25128"	"25112"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"127.7"	""	"99.0"	""	"111.1"	""	"131.3"	"0.7"	"178.5"	"173.0"	""	"959"	"57"	"36.000"	"29.000"	"0.000105630323903413"	"27"	"0"	"0.000107"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDTTWVK"	"[R].dDTTWVk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"661.87079"	"1322.73430"	"1322.73564"	"-1.01"	"-0.00067"	"10/54"	"10"	"54"	"776225.170288086"	"HCD"	"MS2"	"0"	"70.8"	"100.000"	"59.1935"	"19070"	"19070"	"19048"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"102.0"	""	"70.2"	""	"81.4"	""	"124.1"	""	"138.1"	"157.4"	""	"890"	"25"	"36.000"	"29.000"	"0.153235719189686"	"23"	"0.006958"	"0.08117"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDTTWVK"	"[R].dDTTWVk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"661.87134"	"1322.73540"	"1322.73564"	"-0.18"	"-0.00012"	"10/54"	"10"	"54"	"825570.954650879"	"HCD"	"MS2"	"8.168094"	"76.1"	"100.000"	"58.9799"	"18998"	"18998"	"18975"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"93.0"	""	"82.1"	""	"88.7"	""	"125.4"	"0.6"	"161.0"	"172.3"	""	"888"	"26"	"36.000"	"29.000"	"0.108738407937907"	"27"	"0.005119"	"0.05785"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDADAMK"	"[R].lTDADAMk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"661.87280"	"1322.73833"	"1322.73901"	"-0.51"	"-0.00034"	"14/62"	"14"	"62"	"1312440.03363037"	"HCD"	"MS2"	"0"	"113.8"	"100.000"	"57.4778"	"18370"	"18370"	"18351"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"165.6"	""	"172.9"	""	"164.8"	""	"139.5"	""	"220.8"	"216.0"	""	"917"	"50"	"36.000"	"29.000"	"0.000443955397095783"	""	"0"	"0.002006"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDADAMK"	"[R].lTDADAMk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"661.87299"	"1322.73870"	"1322.73901"	"-0.24"	"-0.00016"	"14/62"	"14"	"62"	"1650396.07318115"	"HCD"	"MS2"	"6.568919"	"131.9"	"100.000"	"57.5747"	"18424"	"18424"	"18408"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"182.1"	""	"186.4"	""	"199.2"	""	"154.1"	""	"257.3"	"275.3"	""	"890"	"50"	"36.000"	"29.000"	"0.000470283791600078"	""	"0"	"0.00239"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDADAMK"	"[R].lTDADAMk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.3043"	"0.0000"	"1"	"1"	"1"	"661.87305"	"1322.73882"	"1322.73901"	"-0.14"	"-0.00010"	"7/62"	"7"	"62"	"1341509.02087402"	"HCD"	"MS2"	"8.184397"	"108.7"	"100.000"	"57.7979"	"18500"	"18500"	"18482"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"151.2"	""	"133.1"	""	"155.5"	""	"130.8"	""	"225.3"	"238.3"	""	"891"	"46"	"36.000"	"29.000"	"0.00102765587257479"	""	"0"	"0.002291"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDADAMK"	"[R].lTDADAMk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"661.87329"	"1322.73931"	"1322.73901"	"0.22"	"0.00015"	"14/62"	"14"	"62"	"1344151.50756836"	"HCD"	"MS2"	"0"	"111.2"	"100.000"	"57.2801"	"18304"	"18304"	"18281"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"157.3"	""	"175.0"	""	"162.4"	""	"137.7"	""	"200.6"	"224.2"	""	"892"	"50"	"36.000"	"29.000"	"0.000429867744536291"	""	"0"	"0.001168"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADLSEAANR"	"[K].fADLSEAAnR.[N]"	"N-Term(TMT6plex); N9(Deamidated)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"662.33899"	"1323.67070"	"1323.67421"	"-2.65"	"-0.00175"	"6/80"	"6"	"80"	"305920.269226074"	"HCD"	"MS2"	"0"	"20.4"	"100.000"	"65.7572"	"21714"	"21714"	"21686"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.5"	""	"23.7"	""	"26.8"	""	"33.6"	""	"39.7"	"42.9"	""	"661"	"24"	"35.000"	"28.000"	"0.131574419867931"	"19"	"0.004942"	"0.05413"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIDTGMGLER"	"[K].sIDTGmGLER.[L]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"662.34052"	"1323.67375"	"1323.67758"	"-2.89"	"-0.00191"	"9/88"	"9"	"88"	"920049.697570801"	"HCD"	"MS2"	"22.48294"	"57.9"	"100.000"	"41.6517"	"11941"	"11941"	"11921"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.1"	""	"55.6"	""	"63.4"	""	"124.0"	"1.4"	"125.1"	"110.1"	""	"702"	"26"	"35.000"	"28.000"	"0.0964510847738941"	"17"	"0.004676"	"0.05032"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAFQDTIR"	"[K].eDAFQDTIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"662.34058"	"1323.67388"	"1323.67421"	"-0.25"	"-0.00017"	"7/84"	"7"	"84"	"2590489.03778076"	"HCD"	"MS2"	"15.43953"	"125.6"	"100.000"	"55.8402"	"17703"	"17703"	"17681"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"151.9"	""	"131.2"	""	"123.0"	""	"275.7"	""	"266.0"	"248.2"	""	"700"	"48"	"35.000"	"28.000"	"0.000608230290062281"	""	"0"	"0.0002549"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAFQDTIR"	"[K].eDAFQDTIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"662.34058"	"1323.67388"	"1323.67421"	"-0.25"	"-0.00017"	"7/84"	"7"	"84"	"2736949.58538818"	"HCD"	"MS2"	"18.64959"	"133.7"	"100.000"	"55.6497"	"17639"	"17639"	"17621"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"156.2"	""	"128.2"	""	"143.4"	""	"293.7"	""	"279.7"	"270.4"	""	"700"	"48"	"35.000"	"28.000"	"0.000611037753522177"	""	"0"	"0.0004941"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAFQDTIR"	"[K].eDAFQDTIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"662.34070"	"1323.67412"	"1323.67421"	"-0.07"	"-0.00005"	"7/84"	"7"	"84"	"5495354.20922852"	"HCD"	"MS2"	"2.351938"	"249.4"	"100.000"	"56.1307"	"17822"	"17822"	"17805"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"292.4"	""	"257.3"	""	"249.6"	""	"514.1"	""	"532.0"	"528.2"	""	"700"	"48"	"35.000"	"28.000"	"0.000563725972312395"	""	"0"	"0.0003886"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASSFSDPVER"	"[K].aSSFSDPVER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4M9"	"Oxysterol-binding protein-related protein 1 OS=Rattus norvegicus OX=10116 GN=Osbpl1a PE=1 SV=1"	"Q8K4M9"	"Oxysterol-binding protein-related protein 1 OS=Rattus norvegicus OX=10116 GN=Osbpl1a PE=1 SV=1"	"0"	"2"	"2"	"0.9792"	"0.0000"	"1"	"1"	"1"	"662.34076"	"1323.67424"	"1323.67421"	"0.02"	"0.00002"	"8/86"	"8"	"86"	"1288067.19500732"	"HCD"	"MS2"	"10.64819"	"77.3"	"100.000"	"45.5557"	"13527"	"13527"	"13507"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"100.2"	""	"91.4"	""	"92.2"	""	"134.2"	"0.1"	"146.2"	"169.2"	""	"691"	"48"	"35.000"	"28.000"	"0.000525349171522578"	"16"	"0"	"3.99E-05"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAFQDTIR"	"[K].eDAFQDTIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"0"	"2"	"2"	"0.6304"	"0.0000"	"1"	"1"	"1"	"662.34076"	"1323.67424"	"1323.67421"	"0.02"	"0.00002"	"7/84"	"7"	"84"	"5857922.28527832"	"HCD"	"MS2"	"1.30083"	"259.8"	"100.000"	"55.9397"	"17758"	"17758"	"17745"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"296.0"	""	"260.2"	""	"270.1"	""	"547.5"	""	"555.6"	"540.0"	""	"691"	"46"	"35.000"	"28.000"	"0.000842263637746404"	""	"0"	"0.0007833"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMADGNEK"	"[K].tMADGNEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"662.35229"	"1323.69731"	"1323.69787"	"-0.42"	"-0.00028"	"6/72"	"6"	"72"	"895741.160888672"	"HCD"	"MS2"	"10.48397"	"82.9"	"100.000"	"30.2899"	"7335"	"7335"	"7311"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"134.0"	""	"102.3"	""	"111.5"	""	"96.8"	"0.8"	"173.6"	"167.3"	""	"809"	"30"	"36.000"	"29.000"	"0.0429455852886884"	"17"	"0.0002479"	"0.005567"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMADGNEK"	"[K].tMADGNEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"662.35229"	"1323.69731"	"1323.69787"	"-0.42"	"-0.00028"	"12/72"	"12"	"72"	"3859256.94537354"	"HCD"	"MS2"	"4.573453"	"315.9"	"100.000"	"29.9803"	"7209"	"7209"	"7185"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"555.7"	""	"436.4"	""	"443.4"	""	"324.1"	""	"612.3"	"622.2"	""	"809"	"35"	"36.000"	"29.000"	"0.013210477811371"	"21"	"0.0003538"	"0.006651"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMADGNEK"	"[K].tMADGNEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"662.35254"	"1323.69780"	"1323.69787"	"-0.05"	"-0.00004"	"12/72"	"12"	"72"	"3579862.79815674"	"HCD"	"MS2"	"0"	"296.2"	"100.000"	"30.0105"	"7210"	"7210"	"7181"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"514.1"	""	"383.9"	""	"417.0"	""	"305.1"	"2.0"	"576.4"	"608.8"	""	"802"	"37"	"36.000"	"29.000"	"0.00869249346032697"	"19"	"0.0003538"	"0.006867"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMADGNEK"	"[K].tMADGNEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"662.35291"	"1323.69853"	"1323.69787"	"0.50"	"0.00033"	"6/72"	"6"	"72"	"838879.626281738"	"HCD"	"MS2"	"0"	"77.3"	"100.000"	"30.3293"	"7339"	"7339"	"7317"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"124.2"	""	"89.5"	""	"111.9"	""	"94.3"	""	"152.1"	"161.7"	""	"800"	"28"	"36.000"	"29.000"	"0.0579508741417905"	"16"	"0.0006732"	"0.008563"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GDETFAVLSR"	"[].gDETFAVLSR.[]"	"N-Term(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"662.35754"	"1323.70781"	"1323.71060"	"-2.10"	"-0.00139"	"6/86"	"6"	"86"	"283241.812011719"	"HCD"	"MS2"	"31.27278"	"18.7"	"100.000"	"69.4826"	"23232"	"23232"	"23208"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.7"	""	"22.3"	""	"25.0"	""	"32.2"	""	"34.4"	"38.2"	""	"804"	"1"	"36.000"	"29.000"	"31.858553485315"	"14"	"0.008437"	"0.1022"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QNEGFSLTAK"	"[K].QNEGFSLTAk.[G]"	"K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"662.35809"	"1323.70891"	"1323.71060"	"-1.27"	"-0.00084"	"7/100"	"7"	"100"	"2034205.90155029"	"HCD"	"MS2"	"12.20706"	"52.7"	"100.000"	"81.1374"	"27942"	"27942"	"27923"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"101.1"	""	"88.8"	""	"69.9"	""	"76.1"	""	"77.3"	"84.2"	""	"787"	"54"	"35.000"	"28.000"	"0.000144193185623922"	"19"	"0.001211"	"0.01445"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTADGTFLVR"	"[R].dTADGTFLVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"662.35815"	"1323.70903"	"1323.71060"	"-1.18"	"-0.00078"	"8/82"	"8"	"82"	"1195267.65454102"	"HCD"	"MS2"	"6.544945"	"72.7"	"100.000"	"61.5382"	"20007"	"20007"	"19985"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"84.4"	""	"85.4"	""	"95.4"	""	"113.8"	""	"144.9"	"172.8"	""	"788"	"41"	"35.000"	"28.000"	"0.00340013547820187"	"20"	"0"	"0.0008881"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QNEGFSLTAK"	"[K].QNEGFSLTAk.[G]"	"K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9138"	"0.0000"	"1"	"1"	"1"	"662.35870"	"1323.71013"	"1323.71060"	"-0.35"	"-0.00023"	"7/100"	"7"	"100"	"1601726.28521729"	"HCD"	"MS2"	"14.29823"	"47.8"	"100.000"	"81.1091"	"27929"	"27929"	"27912"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"92.6"	""	"73.5"	""	"60.2"	""	"77.1"	"1.7"	"74.4"	"72.0"	""	"839"	"58"	"36.000"	"29.000"	"6.66395361036768E-05"	"21"	"0.0008629"	"0.01094"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTMESALTAR"	"[R].vTmESALTAR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"662.36047"	"1323.71367"	"1323.71397"	"-0.22"	"-0.00015"	"9/84"	"9"	"84"	"2000338.31506348"	"HCD"	"MS2"	"37.81664"	"92.3"	"100.000"	"40.2095"	"11347"	"11347"	"11320"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"116.6"	""	"113.7"	""	"119.5"	""	"169.6"	""	"178.4"	"179.5"	""	"809"	"25"	"36.000"	"29.000"	"0.115855998882721"	"14"	"0.006769"	"0.07905"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTMESALTAR"	"[R].vTmESALTAR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"662.36078"	"1323.71428"	"1323.71397"	"0.24"	"0.00016"	"16/84"	"16"	"84"	"2014397.72967529"	"HCD"	"MS2"	"0"	"78.6"	"100.000"	"40.0020"	"11271"	"11271"	"11252"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.0"	""	"101.4"	""	"112.0"	""	"149.7"	"0.8"	"135.8"	"156.1"	""	"815"	"32"	"36.000"	"29.000"	"0.0246109066470875"	"21"	"0"	"0.001705"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEWYAR"	"[K].eLEEWYAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"662.83960"	"1324.67192"	"1324.67348"	"-1.18"	"-0.00078"	"5/62"	"5"	"62"	"464517.818969727"	"HCD"	"MS2"	"0"	"27.6"	"100.000"	"73.6111"	"24912"	"24912"	"24893"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.0"	""	"26.6"	""	"32.0"	""	"48.5"	""	"53.3"	"61.1"	""	"589"	"21"	"34.000"	"27.000"	"0.237183950933125"	"17"	"0.0023"	"0.02414"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEWYAR"	"[K].eLEEWYAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"662.83984"	"1324.67241"	"1324.67348"	"-0.81"	"-0.00054"	"6/62"	"6"	"62"	"606959.006713867"	"HCD"	"MS2"	"0"	"36.0"	"100.000"	"73.7049"	"24938"	"24938"	"24921"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.1"	""	"36.9"	""	"44.9"	""	"62.7"	""	"73.6"	"80.1"	""	"595"	"32"	"34.000"	"27.000"	"0.0185134334837825"	"22"	"0.0001301"	"0.004202"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEWYAR"	"[K].eLEEWYAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"662.84009"	"1324.67290"	"1324.67348"	"-0.44"	"-0.00029"	"6/62"	"6"	"62"	"2756811.29205322"	"HCD"	"MS2"	"4.793601"	"134.5"	"100.000"	"73.3982"	"24813"	"24813"	"24796"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"173.5"	""	"151.7"	""	"142.8"	""	"239.5"	"2.0"	"280.1"	"287.7"	""	"604"	"33"	"34.000"	"27.000"	"0.0167883085695662"	"22"	"0.0002479"	"0.00516"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEWYAR"	"[K].eLEEWYAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"662.84039"	"1324.67351"	"1324.67348"	"0.02"	"0.00001"	"6/62"	"6"	"62"	"2831682.7878418"	"HCD"	"MS2"	"4.847851"	"141.2"	"100.000"	"73.2790"	"24777"	"24777"	"24759"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"186.5"	""	"145.9"	""	"158.7"	""	"239.4"	"3.3"	"293.9"	"313.8"	""	"602"	"34"	"34.000"	"27.000"	"0.0120660882005818"	"21"	"0.0005778"	"0.008067"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSDDSEK"	"[K].sVSDDSEk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"662.85291"	"1324.69853"	"1324.69965"	"-0.84"	"-0.00056"	"7/68"	"7"	"68"	"971267.654663086"	"HCD"	"MS2"	"13.85884"	"80.0"	"100.000"	"28.3455"	"6546"	"6546"	"6518"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"135.7"	""	"74.9"	""	"84.5"	""	"145.1"	""	"161.9"	"163.0"	""	"690"	"40"	"35.000"	"28.000"	"0.00373954785337315"	""	"0"	"0.002412"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSDDSEK"	"[K].sVSDDSEk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"662.85352"	"1324.69975"	"1324.69965"	"0.08"	"0.00005"	"12/68"	"12"	"68"	"631126.210205078"	"HCD"	"MS2"	"21.21306"	"51.8"	"100.000"	"28.4651"	"6581"	"6581"	"6553"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.0"	""	"46.2"	""	"62.2"	""	"74.6"	""	"123.0"	"103.5"	""	"690"	"13"	"35.000"	"28.000"	"1.70537187010458"	"18"	"0.004542"	"0.04906"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMTDESGK"	"[K].vMTDESGk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"662.86243"	"1324.71758"	"1324.71827"	"-0.53"	"-0.00035"	"12/62"	"12"	"62"	"2033783.7322998"	"HCD"	"MS2"	"8.494644"	"156.6"	"100.000"	"40.3215"	"11401"	"11401"	"11383"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"237.3"	""	"179.6"	""	"188.0"	""	"233.2"	""	"316.9"	"332.6"	""	"740"	"37"	"35.000"	"28.000"	"0.00721442501910477"	"18"	"0.0001301"	"0.004512"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMTDESGK"	"[K].vMTDESGk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"662.86261"	"1324.71794"	"1324.71827"	"-0.25"	"-0.00017"	"12/62"	"12"	"62"	"1924614.14459229"	"HCD"	"MS2"	"5.223701"	"151.3"	"100.000"	"40.5174"	"11472"	"11472"	"11457"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"236.2"	""	"163.1"	""	"187.6"	""	"232.7"	""	"308.0"	"312.0"	""	"725"	"37"	"35.000"	"28.000"	"0.00716651494540549"	"19"	"0.0002479"	"0.005343"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEFPELAPR"	"[R].hEFPELAPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"442.24524"	"1324.72116"	"1324.72110"	"0.05"	"0.00002"	"7/70"	"7"	"70"	"2358124.46777344"	"HCD"	"MS2"	"9.544802"	"41.3"	"100.000"	"47.6959"	"14387"	"14387"	"14369"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.0"	""	"54.0"	""	"58.3"	""	"62.2"	""	"86.4"	"78.2"	""	"680"	"32"	"35.000"	"28.000"	"0.02015946103572"	"18"	"0"	"0.00365"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYEEIAK"	"[K].nYEEIAk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"662.87891"	"1324.75054"	"1324.75129"	"-0.57"	"-0.00038"	"12/62"	"12"	"62"	"981611.981872559"	"HCD"	"MS2"	"13.56016"	"72.4"	"100.000"	"51.6899"	"16026"	"16026"	"16005"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"108.7"	""	"80.9"	""	"95.4"	""	"109.8"	""	"151.0"	"146.5"	""	"683"	"20"	"35.000"	"28.000"	"0.32165529721255"	"23"	"0.004606"	"0.04979"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYEEIAK"	"[K].nYEEIAk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"662.87891"	"1324.75054"	"1324.75129"	"-0.57"	"-0.00038"	"10/62"	"10"	"62"	"1229651.52197266"	"HCD"	"MS2"	"0"	"97.7"	"100.000"	"51.9874"	"16136"	"16136"	"16123"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"133.3"	""	"101.2"	""	"126.7"	""	"151.8"	""	"203.5"	"212.5"	""	"683"	"22"	"35.000"	"28.000"	"0.198788248868753"	"24"	"0.004606"	"0.04967"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYEEIAK"	"[K].nYEEIAk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"662.87897"	"1324.75066"	"1324.75129"	"-0.48"	"-0.00031"	"10/62"	"10"	"62"	"4361589.31018066"	"HCD"	"MS2"	"3.61031"	"315.0"	"100.000"	"51.6815"	"16012"	"16012"	"15995"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"427.2"	""	"366.0"	""	"349.6"	""	"533.1"	""	"675.5"	"649.1"	""	"689"	"24"	"35.000"	"28.000"	"0.136517782800999"	"25"	"0.006739"	"0.07628"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYEEIAK"	"[K].nYEEIAk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"662.87921"	"1324.75115"	"1324.75129"	"-0.11"	"-0.00007"	"6/62"	"6"	"62"	"4731769.60247803"	"HCD"	"MS2"	"5.713264"	"341.6"	"100.000"	"51.3697"	"15895"	"15895"	"15877"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"437.0"	""	"379.5"	""	"401.2"	""	"594.5"	""	"715.2"	"719.7"	""	"670"	"31"	"35.000"	"28.000"	"0.0284475459137165"	"26"	"0.004942"	"0.05276"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STIIGESMSR"	"[R].sTIIGESmSR.[L]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"663.35309"	"1325.69890"	"1325.69323"	"4.28"	"0.00283"	"8/88"	"8"	"88"	"2439438.89959717"	"HCD"	"MS2"	"29.06344"	"136.6"	"100.000"	"36.5897"	"9885"	"9885"	"9864"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"162.6"	""	"137.9"	""	"143.2"	""	"318.5"	""	"272.5"	"262.8"	""	"636"	"15"	"35.000"	"28.000"	"0.996384860332357"	"17"	"0.004817"	"0.05077"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYEGQQK"	"[K].dYEGQQk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"663.35815"	"1325.70903"	"1325.71015"	"-0.84"	"-0.00056"	"10/56"	"10"	"56"	"2169061.87487793"	"HCD"	"MS2"	"22.18114"	"175.8"	"100.000"	"29.6683"	"7070"	"7070"	"7052"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"316.5"	""	"172.2"	""	"137.4"	""	"387.4"	"0.2"	"375.2"	"278.3"	""	"605"	"23"	"34.000"	"27.000"	"0.153718231374569"	""	"0.005067"	"0.05709"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYEGQQK"	"[K].dYEGQQk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"663.35883"	"1325.71037"	"1325.71015"	"0.17"	"0.00011"	"10/56"	"10"	"56"	"2124498.80822754"	"HCD"	"MS2"	"26.31977"	"174.8"	"100.000"	"29.6334"	"7068"	"7068"	"7042"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"317.2"	""	"169.0"	""	"123.0"	""	"392.8"	""	"369.6"	"296.8"	""	"597"	"21"	"34.000"	"27.000"	"0.217743066810989"	"26"	"0.005119"	"0.05859"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SATYVNTEGR"	"[K].sATYVNTEGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"663.84711"	"1326.68694"	"1326.68511"	"1.38"	"0.00091"	"5/94"	"5"	"94"	"355211.134399414"	"HCD"	"MS2"	"25.02144"	"26.5"	"100.000"	"29.5098"	"7006"	"7006"	"6985"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.5"	""	"36.2"	""	"29.7"	""	"44.7"	"0.5"	"50.1"	"46.0"	""	"574"	"21"	"34.000"	"27.000"	"0.231143612624132"	"26"	"0.0002479"	"0.005986"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATFAEDSK"	"[K].aTFAEDSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P42893"	"Endothelin-converting enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ece1 PE=1 SV=2"	"P42893"	"Endothelin-converting enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ece1 PE=1 SV=2"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"663.86823"	"1326.72917"	"1326.73055"	"-1.04"	"-0.00069"	"7/66"	"7"	"66"	"1317681.64239502"	"HCD"	"MS2"	"0"	"117.6"	"100.000"	"44.6297"	"13150"	"13150"	"13128"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"133.5"	""	"125.7"	""	"119.2"	""	"213.2"	"2.5"	"257.6"	"266.9"	""	"570"	"46"	"34.000"	"27.000"	"0.000658938465200045"	"24"	"0"	"0.002371"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATFAEDSK"	"[K].aTFAEDSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P42893"	"Endothelin-converting enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ece1 PE=1 SV=2"	"P42893"	"Endothelin-converting enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ece1 PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"663.86890"	"1326.73052"	"1326.73055"	"-0.03"	"-0.00002"	"7/66"	"7"	"66"	"802860.956665039"	"HCD"	"MS2"	"30.13542"	"79.8"	"100.000"	"44.7228"	"13176"	"13176"	"13153"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"100.9"	""	"80.2"	""	"86.3"	""	"134.4"	""	"176.1"	"182.6"	""	"552"	"48"	"34.000"	"27.000"	"0.000458045986452767"	"25"	"0"	"0.0007107"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYMLTLNR"	"[K].dGYmLTLNR.[V]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"664.34729"	"1327.68730"	"1327.68775"	"-0.34"	"-0.00022"	"7/76"	"7"	"76"	"1346115.99926758"	"HCD"	"MS2"	"5.549915"	"61.6"	"100.000"	"58.5838"	"18836"	"18836"	"18815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.4"	""	"70.3"	""	"67.2"	""	"144.8"	""	"118.1"	"108.9"	""	"546"	"26"	"34.000"	"27.000"	"0.0621101598600775"	"21"	"0.001465"	"0.01841"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYMLTLNR"	"[K].dGYmLTLNR.[V]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"664.34760"	"1327.68791"	"1327.68775"	"0.12"	"0.00008"	"7/76"	"7"	"76"	"1811014.7880249"	"HCD"	"MS2"	"0"	"77.8"	"100.000"	"59.1060"	"19034"	"19034"	"19016"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.3"	""	"80.9"	""	"85.3"	""	"191.2"	""	"149.6"	"145.0"	""	"545"	"29"	"34.000"	"27.000"	"0.0362548828899029"	"25"	"0.002379"	"0.02445"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYMLTLNR"	"[K].dGYmLTLNR.[V]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"664.34784"	"1327.68840"	"1327.68775"	"0.49"	"0.00032"	"7/76"	"7"	"76"	"1887892.15740967"	"HCD"	"MS2"	"0"	"77.0"	"100.000"	"58.8969"	"18964"	"18964"	"18943"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"99.3"	""	"87.8"	""	"76.0"	""	"186.8"	"1.5"	"133.1"	"145.9"	""	"549"	"28"	"34.000"	"27.000"	"0.0466167882600749"	"21"	"0.0006732"	"0.009129"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYMLTLNR"	"[K].dGYmLTLNR.[V]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"664.34839"	"1327.68950"	"1327.68775"	"1.32"	"0.00087"	"8/76"	"8"	"76"	"1361807.11352539"	"HCD"	"MS2"	"10.64818"	"63.6"	"100.000"	"58.8045"	"18911"	"18911"	"18888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"71.2"	""	"73.6"	""	"71.9"	""	"142.5"	"1.5"	"126.6"	"116.6"	""	"563"	"23"	"34.000"	"27.000"	"0.128966941110141"	"23"	"0.002973"	"0.02899"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESSTASALVA"	"[K].yESSTASALVA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"664.35004"	"1327.69280"	"1327.69428"	"-1.12"	"-0.00074"	"7/92"	"7"	"92"	"139405.270935059"	"HCD"	"MS2"	"17.06706"	"8.2"	"100.000"	"72.5817"	"24481"	"24481"	"24456"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.1"	""	"12.3"	""	"11.5"	""	"14.0"	""	"11.1"	"14.6"	""	"567"	"42"	"34.000"	"27.000"	"0.00166553231442192"	"17"	"0"	"0.003023"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESSTASALVA"	"[K].yESSTASALVA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.8983"	"0.0000"	"1"	"1"	"1"	"664.35022"	"1327.69316"	"1327.69428"	"-0.84"	"-0.00056"	"8/92"	"8"	"92"	"765454.162414551"	"HCD"	"MS2"	"24.00814"	"13.9"	"100.000"	"71.5292"	"24066"	"24066"	"24042"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.9"	""	"16.7"	""	"18.0"	""	"21.9"	""	"32.2"	"28.2"	""	"562"	"59"	"34.000"	"27.000"	"3.90576689370952E-05"	"22"	"0"	"0.0003182"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESSTASALVA"	"[K].yESSTASALVA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.9219"	"0.0000"	"1"	"1"	"1"	"664.35065"	"1327.69402"	"1327.69428"	"-0.20"	"-0.00013"	"9/92"	"9"	"92"	"2591284.91137695"	"HCD"	"MS2"	"0"	"23.0"	"100.000"	"71.8220"	"24185"	"24185"	"24168"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.7"	""	"31.9"	""	"34.5"	""	"37.6"	""	"45.8"	"42.2"	""	"552"	"64"	"34.000"	"27.000"	"1.23284671433666E-05"	"22"	"0"	"0.0005777"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESSTASALVA"	"[K].yESSTASALVA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.9180"	"0.0000"	"1"	"1"	"1"	"664.35071"	"1327.69414"	"1327.69428"	"-0.10"	"-0.00007"	"8/92"	"8"	"92"	"1000679.05401611"	"HCD"	"MS2"	"16.67157"	"16.1"	"100.000"	"71.6806"	"24114"	"24114"	"24088"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.6"	""	"23.3"	""	"24.8"	""	"31.3"	""	"31.2"	"27.1"	""	"552"	"61"	"34.000"	"27.000"	"2.07447918749024E-05"	"21"	"0"	"0.0002621"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESSTASALVA"	"[K].yESSTASALVA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.8906"	"0.0000"	"1"	"1"	"1"	"664.35077"	"1327.69426"	"1327.69428"	"-0.01"	"-0.00001"	"9/92"	"9"	"92"	"2143411.34307861"	"HCD"	"MS2"	"0"	"20.6"	"100.000"	"71.9781"	"24235"	"24235"	"24219"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.0"	""	"32.0"	""	"29.0"	""	"31.7"	""	"42.5"	"38.5"	""	"583"	"64"	"34.000"	"27.000"	"1.04625743949019E-05"	"24"	"0"	"0.0005056"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESSTASALVA"	"[K].yESSTASALVA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"664.35193"	"1327.69658"	"1327.69428"	"1.73"	"0.00115"	"6/92"	"6"	"92"	"229198.583374023"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"72.1399"	"24314"	"24314"	"24293"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.8"	""	"11.0"	""	"16.2"	""	"17.7"	""	"15.5"	"21.6"	""	"584"	"27"	"34.000"	"27.000"	"0.0598939356217065"	"14"	"0.003449"	"0.0334"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTPTQSPVVGR"	"[K].gTPTQSPVVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLH5"	"Arf-GAP domain and FG repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Agfg1 PE=1 SV=1"	"Q4KLH5"	"Arf-GAP domain and FG repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Agfg1 PE=1 SV=1"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"664.38007"	"1327.75286"	"1327.75313"	"-0.21"	"-0.00014"	"9/100"	"9"	"100"	"1674834.39837646"	"HCD"	"MS2"	"12.84746"	"91.3"	"100.000"	"32.1483"	"8079"	"8079"	"8054"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"110.2"	""	"86.5"	""	"110.1"	""	"207.1"	"1.3"	"188.2"	"163.4"	""	"612"	"32"	"34.000"	"27.000"	"0.01899859244744"	"25"	"0"	"0.002009"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEFMDDTSR"	"[R].vEFMDDTSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P62859"	"40S ribosomal protein S28 OS=Rattus norvegicus OX=10116 GN=Rps28 PE=1 SV=1"	"P62859"	"40S ribosomal protein S28 OS=Rattus norvegicus OX=10116 GN=Rps28 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"664.82062"	"1328.63396"	"1328.63538"	"-1.07"	"-0.00071"	"7/76"	"7"	"76"	"882826.018005371"	"HCD"	"MS2"	"15.37184"	"57.1"	"100.000"	"60.9904"	"19783"	"19783"	"19769"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"92.9"	""	"71.1"	""	"73.9"	""	"72.0"	""	"118.3"	"117.2"	""	"329"	"45"	"32.000"	"25.000"	"0.00057831692466905"	"18"	"0"	"0.0002441"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEFMDDTSR"	"[R].vEFMDDTSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P62859"	"40S ribosomal protein S28 OS=Rattus norvegicus OX=10116 GN=Rps28 PE=1 SV=1"	"P62859"	"40S ribosomal protein S28 OS=Rattus norvegicus OX=10116 GN=Rps28 PE=1 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"664.82092"	"1328.63457"	"1328.63538"	"-0.61"	"-0.00041"	"6/76"	"6"	"76"	"916483.208679199"	"HCD"	"MS2"	"7.380959"	"57.7"	"100.000"	"61.1830"	"19846"	"19846"	"19829"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"105.7"	""	"54.5"	""	"74.7"	""	"78.2"	"1.2"	"121.7"	"111.4"	""	"329"	"29"	"32.000"	"25.000"	"0.019461033591679"	"16"	"0"	"0.002172"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPEYFAER"	"[R].sTPEYFAER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"664.83740"	"1328.66753"	"1328.66840"	"-0.65"	"-0.00043"	"6/78"	"6"	"78"	"2447262.63513184"	"HCD"	"MS2"	"0"	"124.8"	"100.000"	"49.3514"	"15061"	"15061"	"15043"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"178.1"	""	"145.5"	""	"171.3"	""	"212.2"	""	"231.3"	"246.7"	""	"466"	"34"	"33.000"	"26.000"	"0.0100081987436219"	"18"	"0.000936"	"0.01212"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPEYFAER"	"[R].sTPEYFAER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"664.83752"	"1328.66777"	"1328.66840"	"-0.47"	"-0.00031"	"5/78"	"5"	"78"	"25289109.4509277"	"HCD"	"MS2"	"0"	"436.7"	"40.395"	"48.7178"	"14816"	"14816"	"14799"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"614.3"	""	"602.3"	""	"589.6"	""	"692.1"	""	"796.3"	"846.3"	""	"473"	"34"	"33.000"	"26.000"	"0.00895016712855925"	"21"	"0"	"0.003457"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPEYFAER"	"[R].sTPEYFAER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"664.83765"	"1328.66802"	"1328.66840"	"-0.29"	"-0.00019"	"6/78"	"6"	"78"	"455693.128234863"	"HCD"	"MS2"	"16.0385"	"32.6"	"100.000"	"49.3783"	"15084"	"15084"	"15063"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.3"	""	"39.5"	""	"52.9"	""	"54.2"	"1.0"	"54.6"	"62.5"	""	"474"	"28"	"33.000"	"26.000"	"0.0413759850242159"	"19"	"0.006505"	"0.07314"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPEYFAER"	"[R].sTPEYFAER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"664.83765"	"1328.66802"	"1328.66840"	"-0.29"	"-0.00019"	"12/78"	"12"	"78"	"4433214.93933105"	"HCD"	"MS2"	"21.1497"	"219.8"	"100.000"	"48.7393"	"14811"	"14811"	"14796"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"300.8"	""	"241.2"	""	"295.4"	""	"387.3"	""	"436.4"	"424.5"	""	"474"	"24"	"33.000"	"26.000"	"0.0872465667532799"	"15"	"0.001812"	"0.02065"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPEYFAER"	"[R].sTPEYFAER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"664.83771"	"1328.66814"	"1328.66840"	"-0.19"	"-0.00013"	"6/78"	"6"	"78"	"2251231.9755249"	"HCD"	"MS2"	"5.764246"	"118.3"	"100.000"	"49.0028"	"14931"	"14931"	"14919"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"158.2"	""	"157.0"	""	"157.9"	""	"190.7"	""	"218.2"	"241.3"	""	"470"	"29"	"33.000"	"26.000"	"0.0283183445987372"	"18"	"0.001211"	"0.01466"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPEYFAER"	"[R].sTPEYFAER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"664.83771"	"1328.66814"	"1328.66840"	"-0.19"	"-0.00013"	"12/78"	"12"	"78"	"6288248.75286865"	"HCD"	"MS2"	"30.41756"	"298.1"	"100.000"	"48.4114"	"14691"	"14691"	"14674"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"402.9"	""	"323.5"	""	"415.4"	""	"516.0"	""	"583.2"	"587.7"	""	"470"	"25"	"33.000"	"26.000"	"0.0739720853813809"	"15"	"0.001635"	"0.01991"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPEYFAER"	"[R].sTPEYFAER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"664.83820"	"1328.66911"	"1328.66840"	"0.54"	"0.00036"	"11/78"	"11"	"78"	"28472536.0803223"	"HCD"	"MS2"	"0"	"395.2"	"32.384"	"49.0411"	"14935"	"14935"	"14918"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"586.1"	""	"489.4"	""	"555.6"	""	"651.5"	""	"705.9"	"757.3"	""	"476"	"38"	"33.000"	"26.000"	"0.00340860720027104"	"24"	"0"	"0.001701"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPNGLTPETR"	"[R].dPNGLTPETR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P04916"	"Retinol-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Rbp4 PE=1 SV=1"	"P04916"	"Retinol-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Rbp4 PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"664.85364"	"1328.70000"	"1328.70076"	"-0.57"	"-0.00038"	"6/102"	"6"	"102"	"1666198.58666992"	"HCD"	"MS2"	"0"	"71.2"	"100.000"	"37.4020"	"10211"	"10211"	"10184"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"114.0"	""	"96.5"	""	"97.9"	""	"125.9"	""	"113.6"	"126.5"	""	"524"	"50"	"34.000"	"27.000"	"0.00026320933705294"	"24"	"0"	"0.0001158"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPNGLTPETR"	"[R].dPNGLTPETR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P04916"	"Retinol-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Rbp4 PE=1 SV=1"	"P04916"	"Retinol-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Rbp4 PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"664.85419"	"1328.70110"	"1328.70076"	"0.25"	"0.00017"	"6/102"	"6"	"102"	"1767174.40765381"	"HCD"	"MS2"	"0"	"77.3"	"100.000"	"37.1599"	"10118"	"10118"	"10090"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"125.9"	""	"105.0"	""	"107.8"	""	"137.4"	""	"129.7"	"125.8"	""	"527"	"50"	"34.000"	"27.000"	"0.000266551186197483"	"23"	"0"	"0.0005902"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPNGLTPETR"	"[R].dPNGLTPETR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P04916"	"Retinol-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Rbp4 PE=1 SV=1"	"P04916"	"Retinol-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Rbp4 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"664.85461"	"1328.70195"	"1328.70076"	"0.90"	"0.00060"	"5/102"	"5"	"102"	"473376.743347168"	"HCD"	"MS2"	"0"	"25.4"	"100.000"	"37.4556"	"10236"	"10236"	"10220"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.8"	""	"32.0"	""	"38.7"	""	"41.9"	""	"49.5"	"44.9"	""	"564"	"42"	"34.000"	"27.000"	"0.00160786324783171"	"18"	"0"	"0.0005187"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSDYDGK"	"[K].sVSDYDGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"664.85809"	"1328.70891"	"1328.70982"	"-0.68"	"-0.00045"	"7/66"	"7"	"66"	"5825823.53448486"	"HCD"	"MS2"	"0"	"464.8"	"100.000"	"42.5299"	"12300"	"12300"	"12284"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"697.5"	""	"534.5"	""	"600.7"	""	"781.9"	""	"844.2"	"947.7"	""	"560"	"36"	"34.000"	"27.000"	"0.00714756364745148"	"20"	"0.0002479"	"0.005349"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSDYDGK"	"[K].sVSDYDGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"664.85815"	"1328.70903"	"1328.70982"	"-0.59"	"-0.00039"	"6/66"	"6"	"66"	"844329.934570313"	"HCD"	"MS2"	"17.42675"	"66.7"	"100.000"	"42.8428"	"12428"	"12428"	"12403"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.0"	""	"64.5"	""	"94.6"	""	"98.3"	""	"141.3"	"149.2"	""	"560"	"24"	"34.000"	"27.000"	"0.113804132166259"	"16"	"0.002056"	"0.02216"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSDYDGK"	"[K].sVSDYDGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"664.85828"	"1328.70928"	"1328.70982"	"-0.41"	"-0.00027"	"7/66"	"7"	"66"	"4683246.91668701"	"HCD"	"MS2"	"23.29909"	"364.9"	"100.000"	"42.2403"	"12182"	"12182"	"12156"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"587.9"	""	"437.8"	""	"482.1"	""	"632.9"	""	"636.5"	"681.2"	""	"560"	"36"	"34.000"	"27.000"	"0.00755367041084577"	"20"	"0.0002479"	"0.00531"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSDYDGK"	"[K].sVSDYDGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"664.85828"	"1328.70928"	"1328.70982"	"-0.41"	"-0.00027"	"7/66"	"7"	"66"	"7298353.61480713"	"HCD"	"MS2"	"0"	"580.3"	"100.000"	"42.6153"	"12324"	"12324"	"12308"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"898.9"	""	"651.5"	""	"775.9"	""	"951.9"	""	"1068.0"	"1163.1"	""	"560"	"35"	"34.000"	"27.000"	"0.00803818562966912"	"19"	"0.0004639"	"0.007638"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSDYDGK"	"[K].sVSDYDGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"664.85931"	"1328.71135"	"1328.70982"	"1.15"	"0.00077"	"6/66"	"6"	"66"	"819248.687805176"	"HCD"	"MS2"	"18.88525"	"60.9"	"100.000"	"42.9443"	"12459"	"12459"	"12431"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"79.5"	""	"62.7"	""	"82.0"	""	"98.5"	""	"128.7"	"127.5"	""	"595"	"25"	"34.000"	"27.000"	"0.0940777603900094"	"18"	"0.0002479"	"0.005944"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGIVDEGALLR"	"[R].gGIVDEGALLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O08651"	"D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Phgdh PE=1 SV=3"	"O08651"	"D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Phgdh PE=1 SV=3"	"0"	"2"	"2"	"0.8868"	"0.0000"	"1"	"1"	"1"	"664.88995"	"1328.77263"	"1328.77353"	"-0.68"	"-0.00045"	"8/82"	"8"	"82"	"457390.656311035"	"HCD"	"MS2"	"7.731401"	"25.6"	"100.000"	"75.8217"	"25801"	"25801"	"25777"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.8"	""	"40.0"	""	"28.1"	""	"37.1"	""	"44.8"	"45.9"	""	"610"	"53"	"34.000"	"27.000"	"0.00015678331373264"	"22"	"0"	"6.814E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVLIGEQAR"	"[R].dVVLIGEQAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"664.88995"	"1328.77263"	"1328.77353"	"-0.68"	"-0.00045"	"7/88"	"7"	"88"	"769085.99420166"	"HCD"	"MS2"	"33.78842"	"38.0"	"100.000"	"64.6340"	"21247"	"21247"	"21223"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.8"	""	"51.8"	""	"56.8"	""	"59.2"	""	"63.1"	"65.0"	""	"610"	"47"	"34.000"	"27.000"	"0.000547393756183921"	""	"0"	"0.0006144"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGIVDEGALLR"	"[R].gGIVDEGALLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O08651"	"D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Phgdh PE=1 SV=3"	"O08651"	"D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Phgdh PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"664.89008"	"1328.77287"	"1328.77353"	"-0.49"	"-0.00033"	"8/82"	"8"	"82"	"492980.591308594"	"HCD"	"MS2"	"8.041756"	"24.6"	"100.000"	"75.9196"	"25831"	"25831"	"25807"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.3"	""	"31.9"	""	"27.3"	""	"41.5"	""	"46.1"	"41.5"	""	"605"	"45"	"34.000"	"27.000"	"0.000976619471818073"	"25"	"0"	"9.227E-05"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVLIGEQAR"	"[R].dVVLIGEQAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6444"	"0.0000"	"1"	"1"	"1"	"664.89008"	"1328.77287"	"1328.77353"	"-0.49"	"-0.00033"	"7/88"	"7"	"88"	"869504.857910156"	"HCD"	"MS2"	"33.18693"	"41.1"	"100.000"	"64.5473"	"21226"	"21226"	"21199"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.0"	""	"61.6"	""	"59.5"	""	"57.4"	""	"71.4"	"71.8"	""	"605"	"45"	"34.000"	"27.000"	"0.00090100121990233"	""	"0"	"0.0003762"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVLIGEQAR"	"[R].dVVLIGEQAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"664.89038"	"1328.77349"	"1328.77353"	"-0.03"	"-0.00002"	"7/88"	"7"	"88"	"532456.558044434"	"HCD"	"MS2"	"28.2116"	"29.1"	"100.000"	"64.9589"	"21374"	"21374"	"21351"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.7"	""	"39.5"	""	"44.5"	""	"42.0"	""	"52.6"	"55.2"	""	"622"	"46"	"34.000"	"27.000"	"0.000701068394979405"	""	"0"	"0.0002631"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVLIGEQAR"	"[R].dVVLIGEQAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7656"	"0.0000"	"1"	"1"	"1"	"664.89056"	"1328.77385"	"1328.77353"	"0.24"	"0.00016"	"8/88"	"8"	"88"	"592955.532409668"	"HCD"	"MS2"	"22.62231"	"32.4"	"100.000"	"64.8575"	"21348"	"21348"	"21326"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.4"	""	"50.8"	""	"49.5"	""	"39.0"	""	"57.2"	"64.5"	""	"612"	"64"	"34.000"	"27.000"	"1.32349232296713E-05"	""	"0"	"0.0001006"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYNEAGVTFT"	"[K].vYNEAGVTFT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.9138"	"0.0000"	"1"	"1"	"1"	"665.34753"	"1329.68779"	"1329.68880"	"-0.76"	"-0.00050"	"8/84"	"8"	"84"	"1331266.60198975"	"HCD"	"MS2"	"3.879179"	"18.9"	"100.000"	"88.2443"	"30741"	"30741"	"30736"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.2"	""	"31.5"	""	"30.0"	""	"29.6"	""	"31.2"	"37.3"	""	"579"	"58"	"34.000"	"27.000"	"4.33160222439338E-05"	"21"	"0"	"0.002473"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYNEAGVTFT"	"[K].vYNEAGVTFT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"665.34766"	"1329.68804"	"1329.68880"	"-0.57"	"-0.00038"	"6/84"	"6"	"84"	"142711.065673828"	"HCD"	"MS2"	"10.36845"	"5.2"	"100.000"	"88.5654"	"30865"	"30865"	"30852"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.7"	""	"7.1"	""	"8.4"	""	"7.8"	""	"10.1"	"10.1"	""	"593"	"36"	"34.000"	"27.000"	"0.00827989248926871"	"20"	"0"	"0.001492"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYNEAGVTFT"	"[K].vYNEAGVTFT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.9107"	"0.0000"	"1"	"1"	"1"	"665.34778"	"1329.68828"	"1329.68880"	"-0.39"	"-0.00026"	"8/84"	"8"	"84"	"4571968.23132324"	"HCD"	"MS2"	"0"	"50.7"	"100.000"	"87.9916"	"30643"	"30643"	"30630"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.4"	""	"79.9"	""	"75.2"	""	"78.5"	""	"93.6"	"97.0"	""	"594"	"56"	"34.000"	"27.000"	"6.69509046009272E-05"	"21"	"0"	"0.0007932"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYNEAGVTFT"	"[K].vYNEAGVTFT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.9107"	"0.0000"	"1"	"1"	"1"	"665.34796"	"1329.68865"	"1329.68880"	"-0.11"	"-0.00008"	"8/84"	"8"	"84"	"1540384.11065674"	"HCD"	"MS2"	"3.323856"	"21.8"	"100.000"	"88.2560"	"30750"	"30750"	"30741"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.2"	""	"28.9"	""	"26.4"	""	"35.3"	""	"41.8"	"44.9"	""	"589"	"56"	"34.000"	"27.000"	"6.74660523740109E-05"	"21"	"0"	"0.0004762"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYNEAGVTFT"	"[K].vYNEAGVTFT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"665.34802"	"1329.68877"	"1329.68880"	"-0.02"	"-0.00001"	"6/84"	"6"	"84"	"150431.410766602"	"HCD"	"MS2"	"15.64462"	"5.4"	"100.000"	"88.5300"	"30848"	"30848"	"30835"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.2"	""	"6.9"	""	"7.2"	""	"8.2"	""	"9.7"	"13.0"	""	"596"	"30"	"34.000"	"27.000"	"0.0307055063891601"	"18"	"0"	"0.002481"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYNEAGVTFT"	"[K].vYNEAGVTFT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8833"	"0.0000"	"1"	"1"	"1"	"665.34808"	"1329.68889"	"1329.68880"	"0.07"	"0.00005"	"8/84"	"8"	"84"	"4498335.12408447"	"HCD"	"MS2"	"0"	"45.0"	"100.000"	"87.9937"	"30649"	"30649"	"30644"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.2"	""	"65.7"	""	"68.7"	""	"70.4"	""	"79.4"	"86.8"	""	"596"	"60"	"34.000"	"27.000"	"2.66818700133779E-05"	"23"	"0"	"0.0002249"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYNEAGVTFT"	"[K].vYNEAGVTFT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"665.34869"	"1329.69011"	"1329.68880"	"0.99"	"0.00066"	"7/84"	"7"	"84"	"177840.594116211"	"HCD"	"MS2"	"20.82957"	"6.4"	"100.000"	"87.7038"	"30535"	"30535"	"30521"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.2"	""	"8.0"	""	"10.4"	""	"14.0"	""	"9.6"	"10.1"	""	"612"	"36"	"34.000"	"27.000"	"0.00689797198918644"	"17"	"0"	"0.0006291"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYNEAGVTFT"	"[K].vYNEAGVTFT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"665.34937"	"1329.69145"	"1329.68880"	"2.00"	"0.00133"	"6/84"	"6"	"84"	"257923.659606934"	"HCD"	"MS2"	"32.32996"	"6.8"	"100.000"	"87.6994"	"30528"	"30528"	"30512"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.3"	""	"10.3"	""	"9.8"	""	"12.5"	""	"9.2"	"14.6"	""	"593"	"47"	"34.000"	"27.000"	"0.000595696018938488"	"19"	"0"	"0.000354"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSVSAAAPVAGR"	"[K].dSVSAAAPVAGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99N37"	"Rho GTPase-activating protein 17 OS=Rattus norvegicus OX=10116 GN=Arhgap17 PE=1 SV=1"	"Q99N37"	"Rho GTPase-activating protein 17 OS=Rattus norvegicus OX=10116 GN=Arhgap17 PE=1 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"665.37018"	"1329.73308"	"1329.73239"	"0.52"	"0.00034"	"10/94"	"10"	"94"	"681395.828979492"	"HCD"	"MS2"	"8.641366"	"42.6"	"100.000"	"36.9862"	"10041"	"10041"	"10018"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.6"	""	"50.4"	""	"52.7"	""	"66.0"	""	"84.3"	"86.1"	""	"727"	"58"	"35.000"	"28.000"	"6.39005233673985E-05"	"20"	"0"	"4.305E-06"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELEQELR"	"[R].aLELEQELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"0"	"2"	"2"	"0.3250"	"0.0000"	"1"	"1"	"1"	"665.38171"	"1329.75615"	"1329.75755"	"-1.05"	"-0.00070"	"6/78"	"6"	"78"	"726283.153625488"	"HCD"	"MS2"	"12.5727"	"38.4"	"100.000"	"77.6863"	"26557"	"26557"	"26543"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.6"	""	"45.8"	""	"50.4"	""	"76.9"	"0.0"	"63.9"	"70.5"	""	"753"	"40"	"35.000"	"28.000"	"0.00347348142323768"	""	"0"	"0.00192"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELEQELR"	"[R].aLELEQELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"0"	"2"	"2"	"0.4186"	"0.0000"	"1"	"1"	"1"	"665.38177"	"1329.75627"	"1329.75755"	"-0.96"	"-0.00064"	"7/78"	"7"	"78"	"667207.284057617"	"HCD"	"MS2"	"15.10325"	"35.1"	"100.000"	"77.4498"	"26451"	"26451"	"26429"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.6"	""	"36.6"	""	"39.9"	""	"63.6"	""	"61.6"	"77.7"	""	"753"	"43"	"35.000"	"28.000"	"0.00188696993460668"	""	"0"	"0.0001852"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELEQELR"	"[R].aLELEQELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"0"	"2"	"2"	"0.4062"	"0.0000"	"1"	"1"	"1"	"665.38208"	"1329.75688"	"1329.75755"	"-0.50"	"-0.00033"	"8/78"	"8"	"78"	"812836.936218262"	"HCD"	"MS2"	"12.6524"	"38.8"	"100.000"	"77.7473"	"26572"	"26572"	"26557"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"64.4"	""	"40.1"	""	"44.8"	""	"66.6"	""	"69.7"	"84.8"	""	"743"	"32"	"35.000"	"28.000"	"0.0246013431125205"	""	"0"	"0.0007968"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELEQELR"	"[R].aLELEQELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"0"	"2"	"2"	"0.4255"	"0.0000"	"1"	"1"	"1"	"665.38251"	"1329.75774"	"1329.75755"	"0.14"	"0.00010"	"7/78"	"7"	"78"	"693377.219238281"	"HCD"	"MS2"	"15.45266"	"35.1"	"100.000"	"77.3768"	"26432"	"26432"	"26412"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.4"	""	"42.5"	""	"41.6"	""	"60.1"	""	"72.9"	"70.9"	""	"753"	"47"	"35.000"	"28.000"	"0.000803091409799686"	""	"0"	"0.0004245"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADLQVQVTR"	"[K].aADLQVQVTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"665.38690"	"1329.76653"	"1329.76878"	"-1.69"	"-0.00113"	"8/94"	"8"	"94"	"1515197.2678833"	"HCD"	"MS2"	"0"	"76.7"	"100.000"	"51.7957"	"16070"	"16070"	"16053"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"111.5"	""	"106.7"	""	"113.7"	""	"107.7"	"7.2"	"124.5"	"154.7"	""	"718"	"48"	"35.000"	"28.000"	"0.000518912877697788"	""	"0"	"3.919E-05"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADLQVQVTR"	"[K].aADLQVQVTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"665.38776"	"1329.76824"	"1329.76878"	"-0.41"	"-0.00027"	"5/94"	"5"	"94"	"397452.047912598"	"HCD"	"MS2"	"0"	"27.2"	"100.000"	"52.4083"	"16308"	"16308"	"16284"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.2"	""	"32.6"	""	"41.4"	""	"36.6"	""	"60.4"	"53.2"	""	"778"	"16"	"35.000"	"28.000"	"0.993000806735225"	"21"	"0.006834"	"0.07984"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADLQVQVTR"	"[K].aADLQVQVTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"665.38782"	"1329.76836"	"1329.76878"	"-0.32"	"-0.00021"	"7/94"	"7"	"94"	"1430879.08453369"	"HCD"	"MS2"	"5.272264"	"73.7"	"100.000"	"52.0999"	"16182"	"16182"	"16163"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"93.9"	""	"105.1"	""	"106.8"	""	"117.7"	"6.1"	"119.8"	"148.6"	""	"778"	"45"	"35.000"	"28.000"	"0.00121045765513424"	"27"	"0"	"4.343E-05"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETEFYLGK"	"[R].DETEFYLGk.[R]"	"K9(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"665.83887"	"1330.67046"	"1330.67281"	"-1.77"	"-0.00118"	"5/70"	"5"	"70"	"149277.624206543"	"HCD"	"MS2"	"30.15414"	"10.5"	"100.000"	"78.0308"	"26686"	"26686"	"26663"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.0"	""	"11.1"	""	"16.1"	""	"22.2"	""	"17.1"	"18.0"	""	"519"	"32"	"34.000"	"27.000"	"0.0166777462643766"	"22"	"0.006189"	"0.07059"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGYTEFSLR"	"[R].eGYTEFSLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"665.84460"	"1330.68193"	"1330.68405"	"-1.59"	"-0.00106"	"7/76"	"7"	"76"	"522587.929382324"	"HCD"	"MS2"	"27.43325"	"33.8"	"100.000"	"68.6001"	"22872"	"22872"	"22847"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.3"	""	"46.6"	""	"46.5"	""	"54.7"	"0.3"	"50.6"	"62.5"	""	"553"	"40"	"34.000"	"27.000"	"0.00294913827520166"	"20"	"0"	"0.002308"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGYTEFSLR"	"[R].eGYTEFSLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"665.84540"	"1330.68352"	"1330.68405"	"-0.40"	"-0.00026"	"7/76"	"7"	"76"	"718042.707336426"	"HCD"	"MS2"	"0"	"42.6"	"100.000"	"68.9069"	"22997"	"22997"	"22975"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"77.5"	""	"62.1"	""	"58.7"	""	"69.2"	""	"63.8"	"73.8"	""	"569"	"43"	"34.000"	"27.000"	"0.00141606200676507"	"21"	"0"	"0.0003479"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGYTEFSLR"	"[R].eGYTEFSLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"665.84558"	"1330.68389"	"1330.68405"	"-0.12"	"-0.00008"	"7/76"	"7"	"76"	"681140.145385742"	"HCD"	"MS2"	"0"	"40.2"	"100.000"	"69.0626"	"23046"	"23046"	"23028"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.1"	""	"59.4"	""	"55.1"	""	"66.7"	""	"66.6"	"73.1"	""	"561"	"42"	"34.000"	"27.000"	"0.00184473023378196"	"26"	"0"	"0.0003154"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGYTEFSLR"	"[R].eGYTEFSLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"665.84570"	"1330.68413"	"1330.68405"	"0.06"	"0.00004"	"6/76"	"6"	"76"	"612635.35369873"	"HCD"	"MS2"	"15.87279"	"36.6"	"100.000"	"68.7653"	"22925"	"22925"	"22901"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.2"	""	"53.4"	""	"47.2"	""	"62.3"	"0.8"	"52.4"	"69.6"	""	"564"	"39"	"34.000"	"27.000"	"0.00352573046521397"	"20"	"0"	"0.0002617"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNQITNNQR"	"[K].nNQITNNQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"665.85535"	"1330.70342"	"1330.70249"	"0.70"	"0.00046"	"7/80"	"7"	"80"	"591575.502807617"	"HCD"	"MS2"	"0"	"35.5"	"100.000"	"20.5923"	"3411"	"3411"	"3392"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"76.1"	""	"40.4"	""	"50.2"	""	"54.0"	""	"57.7"	"59.5"	""	"625"	"42"	"34.000"	"27.000"	"0.00196268237129162"	"23"	"0"	"0.0003024"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQGGQGLEWR"	"[K].aQGGQGLEWR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64611"	"Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Csad PE=1 SV=1"	"Q64611"	"Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Csad PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"665.85883"	"1330.71037"	"1330.70651"	"2.90"	"0.00193"	"9/88"	"9"	"88"	"602611.112060547"	"HCD"	"MS2"	"29.15008"	"40.0"	"100.000"	"47.9605"	"14495"	"14495"	"14474"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.1"	""	"55.1"	""	"52.2"	""	"66.0"	""	"74.8"	"72.6"	""	"674"	"26"	"35.000"	"28.000"	"0.0829143882597751"	"18"	"0.0001301"	"0.004958"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQGGQGLEWR"	"[K].aQGGQGLEWR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64611"	"Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Csad PE=1 SV=1"	"Q64611"	"Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Csad PE=1 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"665.85883"	"1330.71037"	"1330.70651"	"2.90"	"0.00193"	"8/88"	"8"	"88"	"804613.005187988"	"HCD"	"MS2"	"51.39941"	"49.4"	"100.000"	"47.8915"	"14467"	"14467"	"14442"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"69.8"	""	"65.0"	""	"68.5"	""	"77.1"	"0.0"	"92.6"	"95.3"	""	"674"	"16"	"35.000"	"28.000"	"0.884361649120557"	"22"	"0.0001301"	"0.004192"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLIDDLQR"	"[R].dNLIDDLQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"665.86145"	"1330.71562"	"1330.71641"	"-0.59"	"-0.00039"	"8/88"	"8"	"88"	"1106418.88867188"	"HCD"	"MS2"	"28.49795"	"57.7"	"100.000"	"74.3654"	"25219"	"25219"	"25201"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"86.3"	""	"86.9"	""	"81.8"	""	"69.2"	"0.3"	"109.0"	"113.1"	""	"683"	"38"	"35.000"	"28.000"	"0.00492482392545743"	"26"	"0"	"0.0006167"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLIDDLQR"	"[R].dNLIDDLQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"0.5778"	"0.0000"	"1"	"1"	"1"	"665.86151"	"1330.71575"	"1330.71641"	"-0.50"	"-0.00033"	"7/88"	"7"	"88"	"1363915.28295898"	"HCD"	"MS2"	"32.4017"	"71.9"	"100.000"	"74.4750"	"25250"	"25250"	"25233"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"100.9"	""	"107.6"	""	"99.7"	""	"88.9"	""	"138.4"	"147.5"	""	"683"	"45"	"35.000"	"28.000"	"0.00106265112912171"	""	"0"	"0.0002867"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDQSNIQR"	"[K].lQDQSNIQR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"665.86725"	"1330.72722"	"1330.72764"	"-0.32"	"-0.00021"	"7/82"	"7"	"82"	"782775.565979004"	"HCD"	"MS2"	"0"	"52.5"	"100.000"	"32.4216"	"8190"	"8190"	"8170"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"93.8"	""	"78.6"	""	"66.8"	""	"78.1"	""	"91.7"	"88.5"	""	"754"	"35"	"35.000"	"28.000"	"0.0126281970562501"	"24"	"0"	"0.0005734"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDQSNIQR"	"[K].lQDQSNIQR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"665.86761"	"1330.72795"	"1330.72764"	"0.23"	"0.00015"	"8/82"	"8"	"82"	"1857654.8347168"	"HCD"	"MS2"	"0"	"102.0"	"100.000"	"32.3176"	"8154"	"8154"	"8141"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"206.5"	""	"161.1"	""	"111.2"	""	"170.8"	""	"167.1"	"147.2"	""	"754"	"33"	"35.000"	"28.000"	"0.0194688971215571"	"23"	"0"	"0.00149"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDQSNIQR"	"[K].lQDQSNIQR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"665.86902"	"1330.73076"	"1330.72764"	"2.34"	"0.00156"	"7/82"	"7"	"82"	"1322910.1895752"	"HCD"	"MS2"	"0"	"79.9"	"100.000"	"32.1116"	"8064"	"8064"	"8038"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"159.3"	""	"115.4"	""	"83.6"	""	"147.1"	"1.3"	"141.9"	"106.8"	""	"765"	"35"	"35.000"	"28.000"	"0.011874940424591"	"24"	"0"	"0.001526"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDNPDLTSK"	"[K].VLDNPDLTSk.[E]"	"K10(TMT6plex)"	"1"	"1"	"Q9Z1T4"	"Connector enhancer of kinase suppressor of ras 2 OS=Rattus norvegicus OX=10116 GN=Cnksr2 PE=1 SV=1"	"Q9Z1T4"	"Connector enhancer of kinase suppressor of ras 2 OS=Rattus norvegicus OX=10116 GN=Cnksr2 PE=1 SV=1"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"1"	"665.87415"	"1330.74101"	"1330.74156"	"-0.41"	"-0.00027"	"5/96"	"5"	"96"	"561747.218566895"	"HCD"	"MS2"	"14.20443"	"24.1"	"100.000"	"71.4523"	"24021"	"24021"	"24000"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.0"	""	"33.1"	""	"40.0"	""	"35.7"	"0.7"	"43.1"	"39.9"	""	"839"	"17"	"36.000"	"29.000"	"0.838942054310937"	"24"	"0.008668"	"0.1089"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDNPDLTSK"	"[K].VLDNPDLTSk.[E]"	"K10(TMT6plex)"	"1"	"1"	"Q9Z1T4"	"Connector enhancer of kinase suppressor of ras 2 OS=Rattus norvegicus OX=10116 GN=Cnksr2 PE=1 SV=1"	"Q9Z1T4"	"Connector enhancer of kinase suppressor of ras 2 OS=Rattus norvegicus OX=10116 GN=Cnksr2 PE=1 SV=1"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"1"	"665.87512"	"1330.74297"	"1330.74156"	"1.06"	"0.00070"	"5/96"	"5"	"96"	"317787.981384277"	"HCD"	"MS2"	"33.73547"	"17.6"	"100.000"	"71.1299"	"23890"	"23890"	"23861"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.9"	""	"24.7"	""	"27.6"	""	"24.2"	""	"32.5"	"27.1"	""	"866"	"20"	"36.000"	"29.000"	"0.399473427958012"	"25"	"0.006685"	"0.07507"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEQVTDLR"	"[K].lQEQVTDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"0"	"2"	"2"	"0.5870"	"0.0000"	"1"	"1"	"1"	"665.87988"	"1330.75249"	"1330.75280"	"-0.23"	"-0.00015"	"6/86"	"6"	"86"	"698886.60723877"	"HCD"	"MS2"	"22.82945"	"41.4"	"100.000"	"58.3904"	"18757"	"18757"	"18735"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.3"	""	"49.1"	""	"51.1"	""	"68.0"	"0.1"	"82.1"	"85.7"	""	"883"	"46"	"36.000"	"29.000"	"0.0011720083556122"	""	"0"	"0.001668"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPEEAIK"	"[R].vSPEEAIk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"665.90216"	"1330.79704"	"1330.79824"	"-0.90"	"-0.00060"	"7/62"	"7"	"62"	"1296919.75915527"	"HCD"	"MS2"	"19.66761"	"96.2"	"100.000"	"54.8693"	"17321"	"17321"	"17300"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"137.5"	""	"117.3"	""	"135.6"	""	"144.4"	"1.8"	"199.9"	"176.1"	""	"737"	"43"	"35.000"	"28.000"	"0.00191618524722601"	"23"	"0.0023"	"0.02366"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLEPVEK"	"[R].gTLEPVEk.[SA]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"3"	"P14659"	"Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"665.90222"	"1330.79717"	"1330.79824"	"-0.80"	"-0.00054"	"7/66"	"7"	"66"	"5149807.48242188"	"HCD"	"MS2"	"0"	"351.3"	"100.000"	"50.9253"	"15714"	"15714"	"15699"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"495.1"	""	"466.2"	""	"486.6"	""	"552.8"	"2.3"	"671.0"	"655.6"	""	"737"	"47"	"35.000"	"28.000"	"0.000662883932224958"	"23"	"0.0001301"	"0.004714"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLEPVEK"	"[R].gTLEPVEk.[SA]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"3"	"P14659"	"Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"665.90247"	"1330.79766"	"1330.79824"	"-0.44"	"-0.00029"	"7/66"	"7"	"66"	"3141389.10913086"	"HCD"	"MS2"	"0"	"224.0"	"100.000"	"51.3336"	"15870"	"15870"	"15854"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"300.3"	""	"291.1"	""	"307.3"	""	"355.4"	""	"411.1"	"462.8"	""	"737"	"47"	"35.000"	"28.000"	"0.000694124689476992"	"22"	"0"	"0.00236"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPEEAIK"	"[R].vSPEEAIk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"665.90295"	"1330.79863"	"1330.79824"	"0.30"	"0.00020"	"7/62"	"7"	"62"	"1126311.05932617"	"HCD"	"MS2"	"17.01955"	"84.5"	"100.000"	"55.0716"	"17389"	"17389"	"17370"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.1"	""	"120.5"	""	"124.0"	""	"118.7"	""	"160.6"	"157.5"	""	"734"	"44"	"35.000"	"28.000"	"0.00131421392416667"	"24"	"0.0023"	"0.02385"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLEPVEK"	"[R].gTLEPVEk.[SA]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"3"	"P14659"	"Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"665.90338"	"1330.79949"	"1330.79824"	"0.94"	"0.00062"	"7/66"	"7"	"66"	"2316235.37463379"	"HCD"	"MS2"	"0"	"175.7"	"100.000"	"50.6307"	"15594"	"15594"	"15572"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"261.8"	""	"254.8"	""	"220.5"	""	"299.3"	"0.4"	"310.3"	"317.0"	""	"778"	"46"	"35.000"	"28.000"	"0.00105183980363834"	"25"	"0"	"0.001975"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLEPVEK"	"[R].gTLEPVEk.[SA]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"3"	"P14659"	"Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"665.90369"	"1330.80010"	"1330.79824"	"1.40"	"0.00093"	"7/66"	"7"	"66"	"4417182.53857422"	"HCD"	"MS2"	"1.762522"	"294.3"	"100.000"	"51.0480"	"15753"	"15753"	"15730"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"419.7"	""	"426.1"	""	"389.3"	""	"465.6"	"3.7"	"541.1"	"542.3"	""	"745"	"46"	"35.000"	"28.000"	"0.00100029080600779"	"26"	"0.0001301"	"0.004095"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANFENHSGR"	"[R].aANFENHSGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"666.33600"	"1331.66472"	"1331.66538"	"-0.49"	"-0.00033"	"11/92"	"11"	"92"	"3071894.09094238"	"HCD"	"MS2"	"27.18645"	"150.8"	"100.000"	"21.9676"	"3967"	"3967"	"3951"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"242.6"	""	"181.6"	""	"196.1"	""	"238.4"	"1.1"	"280.6"	"288.7"	""	"492"	"37"	"33.000"	"26.000"	"0.00490834529482345"	"17"	"0"	"0.0007296"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANFENHSGR"	"[R].aANFENHSGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"666.33667"	"1331.66606"	"1331.66538"	"0.52"	"0.00034"	"12/92"	"12"	"92"	"2897800.99829102"	"HCD"	"MS2"	"29.60197"	"142.1"	"100.000"	"22.0022"	"3964"	"3964"	"3944"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"233.2"	""	"172.2"	""	"173.9"	""	"246.6"	""	"254.7"	"267.6"	""	"498"	"40"	"33.000"	"26.000"	"0.00242214058720465"	"20"	"0"	"0.0003121"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGNTLTYYR"	"[R].dGNTLTYYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"666.34277"	"1331.67827"	"1331.67930"	"-0.77"	"-0.00051"	"6/86"	"6"	"86"	"4820397.76098633"	"HCD"	"MS2"	"14.12241"	"264.3"	"100.000"	"46.4987"	"13911"	"13911"	"13902"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"468.4"	""	"354.8"	""	"328.8"	""	"437.1"	"14.6"	"463.8"	"433.7"	""	"562"	"30"	"34.000"	"27.000"	"0.027714453546237"	"21"	"0"	"0.003008"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGNTLTYYR"	"[R].dGNTLTYYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"666.34314"	"1331.67900"	"1331.67930"	"-0.22"	"-0.00015"	"6/86"	"6"	"86"	"2415293.23602295"	"HCD"	"MS2"	"11.18608"	"138.8"	"100.000"	"46.1774"	"13781"	"13781"	"13753"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"254.0"	""	"179.7"	""	"150.5"	""	"251.2"	"1.4"	"261.6"	"215.2"	""	"577"	"32"	"34.000"	"27.000"	"0.0191049461317958"	"23"	"0"	"0.00209"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGNTLTYYR"	"[R].dGNTLTYYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"3"	"666.34326"	"1331.67925"	"1331.67930"	"-0.04"	"-0.00002"	"12/86"	"12"	"86"	"1170060.1416626"	"HCD"	"MS2"	"30.79206"	"79.7"	"100.000"	"46.8040"	"14034"	"14034"	"14014"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"126.7"	""	"107.6"	""	"114.0"	""	"128.6"	""	"129.1"	"148.2"	""	"579"	"9"	"34.000"	"27.000"	"3.40916929334274"	"19"	"0.006308"	"0.07154"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGNTLTYYR"	"[R].dGNTLTYYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"666.34357"	"1331.67986"	"1331.67930"	"0.42"	"0.00028"	"6/86"	"6"	"86"	"5045694.65045166"	"HCD"	"MS2"	"9.238257"	"265.8"	"100.000"	"46.6251"	"13951"	"13951"	"13942"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"486.5"	""	"357.6"	""	"311.4"	""	"466.4"	"15.0"	"468.5"	"409.0"	""	"578"	"31"	"34.000"	"27.000"	"0.0207442550177423"	"22"	"0"	"0.001739"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGNTLTYYR"	"[R].dGNTLTYYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"666.34375"	"1331.68022"	"1331.67930"	"0.70"	"0.00046"	"6/86"	"6"	"86"	"1565874.75292969"	"HCD"	"MS2"	"18.76827"	"92.9"	"100.000"	"46.3291"	"13831"	"13831"	"13805"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"154.8"	""	"123.4"	""	"113.6"	""	"164.7"	"0.9"	"166.3"	"156.1"	""	"590"	"32"	"34.000"	"27.000"	"0.0205032173688695"	"22"	"0"	"0.002175"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGNTLTYYR"	"[R].dGNTLTYYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"666.34375"	"1331.68022"	"1331.67930"	"0.70"	"0.00046"	"8/86"	"8"	"86"	"1806177.70507813"	"HCD"	"MS2"	"21.49801"	"80.5"	"100.000"	"46.9184"	"14069"	"14069"	"14057"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"128.0"	""	"105.1"	""	"96.0"	""	"130.9"	"1.4"	"156.8"	"146.3"	""	"590"	"21"	"34.000"	"27.000"	"0.21321709206264"	"26"	"0.0004639"	"0.007851"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELDNMPLR"	"[K].vELDNmPLR.[G]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"666.36292"	"1331.71855"	"1331.71905"	"-0.37"	"-0.00025"	"8/76"	"8"	"76"	"2676938.15393066"	"HCD"	"MS2"	"3.410119"	"104.1"	"100.000"	"57.5379"	"18395"	"18395"	"18380"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"84.1"	""	"105.1"	""	"106.5"	""	"273.2"	""	"216.6"	"205.8"	""	"833"	"39"	"36.000"	"29.000"	"0.00551588249408578"	"29"	"0.002795"	"0.0267"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELDNMPLR"	"[K].vELDNmPLR.[G]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"666.36292"	"1331.71855"	"1331.71905"	"-0.37"	"-0.00025"	"8/76"	"8"	"76"	"2698276.91375732"	"HCD"	"MS2"	"3.615588"	"103.0"	"100.000"	"57.3860"	"18347"	"18347"	"18329"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.4"	""	"97.1"	""	"106.1"	""	"273.0"	""	"218.1"	"193.5"	""	"833"	"39"	"36.000"	"29.000"	"0.00550319631638709"	"29"	"0.0008629"	"0.01099"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELDNMPLR"	"[K].vELDNmPLR.[G]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"666.36346"	"1331.71965"	"1331.71905"	"0.45"	"0.00030"	"8/76"	"8"	"76"	"728004.468933105"	"HCD"	"MS2"	"43.73864"	"40.4"	"100.000"	"57.0750"	"18221"	"18221"	"18195"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.0"	""	"41.0"	""	"49.5"	""	"91.8"	""	"80.3"	"76.9"	""	"831"	"30"	"36.000"	"29.000"	"0.0442151424072204"	"20"	"0.000936"	"0.01167"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILDEELQR"	"[K].sILDEELQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"666.37170"	"1331.73613"	"1331.73681"	"-0.51"	"-0.00034"	"7/76"	"7"	"76"	"2113891.02490234"	"HCD"	"MS2"	"0"	"96.3"	"100.000"	"70.1251"	"23479"	"23479"	"23461"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"138.1"	""	"123.8"	""	"134.7"	""	"129.2"	""	"178.1"	"210.5"	""	"939"	"46"	"36.000"	"29.000"	"0.00130207378913404"	""	"0"	"0.000407"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILDEELQR"	"[K].sILDEELQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"666.37177"	"1331.73625"	"1331.73681"	"-0.42"	"-0.00028"	"7/76"	"7"	"76"	"2197354.96923828"	"HCD"	"MS2"	"0"	"96.3"	"100.000"	"69.9920"	"23439"	"23439"	"23421"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"139.7"	""	"120.8"	""	"135.3"	""	"129.9"	""	"174.6"	"215.3"	""	"939"	"48"	"36.000"	"29.000"	"0.000773812242821226"	""	"0"	"0.0007492"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDGGLETIR"	"[R].eIDGGLETIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"666.37183"	"1331.73638"	"1331.73681"	"-0.33"	"-0.00022"	"7/86"	"7"	"86"	"4951795.17254639"	"HCD"	"MS2"	"0.5978411"	"213.0"	"100.000"	"63.8653"	"20949"	"20949"	"20933"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"423.5"	""	"274.3"	""	"321.2"	""	"301.2"	"0.3"	"351.6"	"340.4"	""	"939"	"54"	"36.000"	"29.000"	"0.000201203530326598"	""	"0"	"0.000108"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDGGLETIR"	"[R].eIDGGLETIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.7544"	"0.0000"	"1"	"1"	"1"	"666.37189"	"1331.73650"	"1331.73681"	"-0.24"	"-0.00016"	"7/86"	"7"	"86"	"805134.261901855"	"HCD"	"MS2"	"0"	"30.7"	"100.000"	"64.1533"	"21066"	"21066"	"21049"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.2"	""	"42.6"	""	"46.0"	""	"46.7"	"0.3"	"55.0"	"52.4"	""	"939"	"57"	"36.000"	"29.000"	"0.000102479169361029"	""	"0"	"0.0001323"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDGGLETIR"	"[R].eIDGGLETIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"666.37195"	"1331.73662"	"1331.73681"	"-0.14"	"-0.00010"	"8/86"	"8"	"86"	"1089518.81634521"	"HCD"	"MS2"	"33.60455"	"66.0"	"100.000"	"63.5817"	"20833"	"20833"	"20811"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"122.1"	""	"76.2"	""	"88.4"	""	"107.4"	""	"114.5"	"116.0"	""	"930"	"56"	"36.000"	"29.000"	"0.000127189995773262"	""	"0"	"0.000447"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDGGLETIR"	"[R].eIDGGLETIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.6731"	"0.0000"	"1"	"1"	"1"	"666.37207"	"1331.73686"	"1331.73681"	"0.04"	"0.00003"	"7/86"	"7"	"86"	"698972.007507324"	"HCD"	"MS2"	"41.17513"	"43.6"	"100.000"	"63.6685"	"20854"	"20854"	"20827"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"81.2"	""	"51.0"	""	"54.9"	""	"71.3"	""	"76.2"	"80.5"	""	"962"	"52"	"36.000"	"29.000"	"0.000291840174532071"	""	"0"	"0.0004656"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDGGLETIR"	"[R].eIDGGLETIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.7321"	"0.0000"	"1"	"1"	"1"	"666.37213"	"1331.73699"	"1331.73681"	"0.13"	"0.00009"	"7/86"	"7"	"86"	"668778.600158691"	"HCD"	"MS2"	"0"	"28.5"	"100.000"	"64.2790"	"21102"	"21102"	"21083"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.5"	""	"35.3"	""	"39.4"	""	"41.2"	""	"52.4"	"53.8"	""	"960"	"56"	"36.000"	"29.000"	"0.000108203482183317"	""	"0"	"0.0002041"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDGGLETIR"	"[R].eIDGGLETIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.6481"	"0.0000"	"1"	"1"	"1"	"666.37213"	"1331.73699"	"1331.73681"	"0.13"	"0.00009"	"7/86"	"7"	"86"	"4815231.47857666"	"HCD"	"MS2"	"0.4310456"	"217.4"	"100.000"	"63.9911"	"20985"	"20985"	"20967"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"440.1"	""	"282.1"	""	"320.7"	""	"303.8"	""	"364.0"	"346.3"	""	"960"	"54"	"36.000"	"29.000"	"0.000213423008385172"	""	"0"	"5.726E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILDEELQR"	"[K].sILDEELQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"3"	"666.37219"	"1331.73711"	"1331.73681"	"0.22"	"0.00015"	"6/76"	"6"	"76"	"425139.148620605"	"HCD"	"MS2"	"14.69259"	"29.0"	"100.000"	"70.4483"	"23611"	"23611"	"23589"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.8"	""	"33.0"	""	"42.7"	""	"47.9"	""	"55.0"	"59.9"	""	"960"	"32"	"36.000"	"29.000"	"0.0335924158081091"	""	"0"	"0.003682"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILDEELQR"	"[K].sILDEELQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"666.37262"	"1331.73796"	"1331.73681"	"0.86"	"0.00058"	"7/76"	"7"	"76"	"405694.682067871"	"HCD"	"MS2"	"10.33144"	"30.3"	"100.000"	"70.3105"	"23569"	"23569"	"23544"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.1"	""	"36.8"	""	"39.8"	""	"44.5"	"1.0"	"57.8"	"58.1"	""	"966"	"42"	"36.000"	"29.000"	"0.00314736514331387"	""	"0"	"0.0005478"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSMPLNGLK"	"[M].aLSmPLnGLk.[E]"	"N-Term(Prot)(Acetyl); M4(Oxidation); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"666.37549"	"1331.74370"	"1331.74421"	"-0.38"	"-0.00025"	"6/78"	"6"	"78"	"512939.285766602"	"HCD"	"MS2"	"64.2165"	"33.9"	"100.000"	"92.1818"	"32263"	"32263"	"32249"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.9"	""	"28.2"	""	"40.2"	""	"86.1"	""	"68.6"	"61.8"	""	"894"	"13"	"36.000"	"29.000"	"2.33511096482607"	"13"	"0.00736"	"0.08559"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSMPLNGLK"	"[M].aLSmPLnGLk.[E]"	"N-Term(Prot)(Acetyl); M4(Oxidation); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"666.37573"	"1331.74419"	"1331.74421"	"-0.01"	"-0.00001"	"6/78"	"6"	"78"	"212541.183044434"	"HCD"	"MS2"	"9.733163"	"10.8"	"100.000"	"91.8086"	"32113"	"32113"	"32105"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.1"	""	"9.6"	""	"11.0"	""	"25.6"	""	"27.7"	"22.7"	""	"903"	"39"	"36.000"	"29.000"	"0.00596564978835238"	"22"	"0.001546"	"0.01878"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSMPLNGLK"	"[M].aLSmPLnGLk.[E]"	"N-Term(Prot)(Acetyl); M4(Oxidation); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"666.37598"	"1331.74468"	"1331.74421"	"0.35"	"0.00024"	"6/78"	"6"	"78"	"250564.255187988"	"HCD"	"MS2"	"6.245141"	"12.1"	"100.000"	"91.8939"	"32151"	"32151"	"32138"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.1"	""	"9.3"	""	"14.1"	""	"28.4"	""	"30.6"	"23.2"	""	"895"	"34"	"36.000"	"29.000"	"0.0185691934078877"	"24"	"0.002711"	"0.02623"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSMPLNGLK"	"[M].aLSmPLnGLk.[E]"	"N-Term(Prot)(Acetyl); M4(Oxidation); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"666.37653"	"1331.74578"	"1331.74421"	"1.18"	"0.00078"	"6/78"	"6"	"78"	"447136.868713379"	"HCD"	"MS2"	"32.04239"	"30.1"	"100.000"	"92.1006"	"32223"	"32223"	"32209"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.6"	""	"28.4"	""	"37.9"	""	"72.3"	"1.3"	"59.2"	"44.8"	""	"895"	"39"	"36.000"	"29.000"	"0.0061772195840979"	"20"	"0.001886"	"0.02181"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDITGEPK"	"[R].nDITGEPk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"666.38153"	"1331.75578"	"1331.75710"	"-0.99"	"-0.00066"	"7/78"	"7"	"78"	"570442.925292969"	"HCD"	"MS2"	"46.98535"	"40.8"	"100.000"	"39.6029"	"11099"	"11099"	"11070"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"70.0"	""	"62.2"	""	"58.4"	""	"60.3"	"2.2"	"65.3"	"67.3"	""	"940"	"12"	"36.000"	"29.000"	"2.99983838509558"	"16"	"0.001374"	"0.01678"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDITGEPK"	"[R].nDITGEPk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.6512"	"0.0000"	"1"	"1"	"1"	"666.38159"	"1331.75591"	"1331.75710"	"-0.90"	"-0.00060"	"12/78"	"12"	"78"	"4074221.57891846"	"HCD"	"MS2"	"0"	"286.8"	"100.000"	"38.7699"	"10768"	"10768"	"10752"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"462.1"	""	"376.1"	""	"390.5"	""	"467.2"	"1.5"	"546.4"	"472.1"	""	"940"	"43"	"36.000"	"29.000"	"0.00250090881855393"	""	"0.0001301"	"0.00471"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDITGEPK"	"[R].nDITGEPk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"666.38184"	"1331.75640"	"1331.75710"	"-0.53"	"-0.00035"	"12/78"	"12"	"78"	"4424987.89044189"	"HCD"	"MS2"	"0"	"291.6"	"100.000"	"39.0570"	"10885"	"10885"	"10870"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"439.1"	""	"364.1"	""	"403.2"	""	"460.3"	"1.1"	"577.7"	"518.5"	""	"941"	"41"	"36.000"	"29.000"	"0.00363546215287528"	"28"	"0.0002479"	"0.005535"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDITGEPK"	"[R].nDITGEPk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"666.38220"	"1331.75713"	"1331.75710"	"0.02"	"0.00001"	"12/78"	"12"	"78"	"3742901.46936035"	"HCD"	"MS2"	"0"	"259.9"	"100.000"	"39.2854"	"10969"	"10969"	"10956"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"379.1"	""	"295.4"	""	"371.8"	""	"397.3"	"0.3"	"536.7"	"483.8"	""	"944"	"43"	"36.000"	"29.000"	"0.00250001145516863"	"29"	"0.0001301"	"0.004174"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDITGEPK"	"[R].nDITGEPk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"666.38239"	"1331.75749"	"1331.75710"	"0.29"	"0.00020"	"12/78"	"12"	"78"	"4855161.85888672"	"HCD"	"MS2"	"0"	"323.9"	"100.000"	"39.0051"	"10855"	"10855"	"10837"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"506.0"	""	"434.9"	""	"428.6"	""	"518.4"	""	"647.2"	"535.9"	""	"944"	"39"	"36.000"	"29.000"	"0.00539438574020772"	"28"	"0.0002479"	"0.00514"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEETQTLLR"	"[R].lEETQTLLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"666.38983"	"1331.77239"	"1331.77320"	"-0.61"	"-0.00040"	"7/80"	"7"	"80"	"549931.18939209"	"HCD"	"MS2"	"12.85068"	"35.9"	"100.000"	"70.6401"	"23689"	"23689"	"23669"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.3"	""	"55.7"	""	"44.7"	""	"55.9"	"0.3"	"71.8"	"68.8"	""	"904"	"42"	"36.000"	"29.000"	"0.00305589504877176"	"21"	"0"	"0.00172"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEETQTLLR"	"[R].lEETQTLLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"666.38995"	"1331.77263"	"1331.77320"	"-0.42"	"-0.00028"	"7/80"	"7"	"80"	"587126.074951172"	"HCD"	"MS2"	"23.08549"	"36.4"	"100.000"	"70.5020"	"23647"	"23647"	"23624"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.0"	""	"48.5"	""	"50.3"	""	"52.7"	""	"73.6"	"75.6"	""	"904"	"43"	"36.000"	"29.000"	"0.00207080132794969"	"22"	"0"	"0.0003721"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQEQELK"	"[K].vQEQELk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q3KR86"	"MICOS complex subunit Mic60 (Fragment) OS=Rattus norvegicus OX=10116 GN=Immt PE=1 SV=1"	"Q3KR86"	"MICOS complex subunit Mic60 (Fragment) OS=Rattus norvegicus OX=10116 GN=Immt PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"3"	"666.39966"	"1331.79204"	"1331.79349"	"-1.09"	"-0.00072"	"6/62"	"6"	"62"	"611212.88079834"	"HCD"	"MS2"	"38.06392"	"57.1"	"100.000"	"44.1934"	"12966"	"12966"	"12939"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"70.1"	""	"77.7"	""	"76.5"	""	"88.6"	"0.2"	"112.7"	"116.3"	""	"825"	"10"	"36.000"	"29.000"	"4.15359313401369"	"20"	"0.007627"	"0.0935"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QILDEAGK"	"[R].qILDEAGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4722"	"0.0000"	"1"	"1"	"1"	"666.40015"	"1331.79302"	"1331.79349"	"-0.35"	"-0.00024"	"11/72"	"11"	"72"	"1692422.67431641"	"HCD"	"MS2"	"3.609013"	"131.2"	"100.000"	"58.0678"	"18625"	"18625"	"18607"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"199.5"	""	"158.0"	""	"164.1"	""	"215.3"	"0.7"	"234.9"	"270.7"	""	"819"	"36"	"36.000"	"29.000"	"0.00989131211705202"	""	"0.0001301"	"0.004085"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QILDEAGK"	"[R].qILDEAGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"666.40051"	"1331.79375"	"1331.79349"	"0.20"	"0.00013"	"7/72"	"7"	"72"	"1462968.71936035"	"HCD"	"MS2"	"3.864807"	"111.0"	"100.000"	"58.3051"	"18707"	"18707"	"18687"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"167.3"	""	"126.9"	""	"138.3"	""	"188.4"	""	"218.4"	"221.5"	""	"815"	"36"	"36.000"	"29.000"	"0.00937837540593967"	""	"0"	"0.002738"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTEHVEEGR"	"[R].fTEHVEEGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"666.84039"	"1332.67351"	"1332.67454"	"-0.78"	"-0.00052"	"7/74"	"7"	"74"	"861114.729248047"	"HCD"	"MS2"	"25.0766"	"52.0"	"100.000"	"31.1782"	"7692"	"7692"	"7673"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.2"	""	"62.0"	""	"76.2"	""	"86.2"	""	"109.5"	"102.5"	""	"535"	"38"	"34.000"	"27.000"	"0.00412404871164008"	"18"	"0"	"0.0004956"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTEHVEEGR"	"[R].fTEHVEEGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"666.84082"	"1332.67436"	"1332.67454"	"-0.14"	"-0.00009"	"8/74"	"8"	"74"	"769144.280944824"	"HCD"	"MS2"	"0"	"47.5"	"100.000"	"31.2015"	"7692"	"7692"	"7663"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.1"	""	"53.5"	""	"63.3"	""	"80.8"	""	"100.4"	"98.5"	""	"556"	"30"	"34.000"	"27.000"	"0.0274185697005476"	"15"	"0"	"0.0009433"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSQETEALGR"	"[R].lSQETEALGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"666.86865"	"1332.73003"	"1332.73206"	"-1.52"	"-0.00102"	"8/94"	"8"	"94"	"1100272.03961182"	"HCD"	"MS2"	"28.07895"	"55.0"	"100.000"	"50.0832"	"15372"	"15372"	"15350"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.5"	""	"66.0"	""	"65.2"	""	"93.8"	"5.6"	"113.2"	"110.2"	""	"914"	"43"	"36.000"	"29.000"	"0.00239837009334146"	"24"	"0"	"0.0001073"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSQETEALGR"	"[R].lSQETEALGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"666.86926"	"1332.73125"	"1332.73206"	"-0.61"	"-0.00041"	"8/94"	"8"	"94"	"1458592.23272705"	"HCD"	"MS2"	"28.88108"	"70.8"	"100.000"	"50.4892"	"15526"	"15526"	"15502"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"82.0"	""	"83.0"	""	"80.7"	""	"110.9"	"0.2"	"139.7"	"175.9"	""	"1009"	"40"	"37.000"	"30.000"	"0.00478477114735303"	"26"	"0"	"0.0001048"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAALEDK"	"[R].dLAALEDk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6042"	"0.0000"	"1"	"1"	"1"	"666.89178"	"1332.77629"	"1332.77750"	"-0.91"	"-0.00060"	"7/68"	"7"	"68"	"2201258.91387939"	"HCD"	"MS2"	"9.020713"	"148.3"	"100.000"	"74.5696"	"25288"	"25288"	"25277"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"176.5"	""	"152.8"	""	"162.1"	""	"223.6"	""	"318.0"	"381.1"	""	"937"	"48"	"36.000"	"29.000"	"0.000770388152326195"	""	"0"	"0.002822"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAALEDK"	"[R].dLAALEDk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6739"	"0.0000"	"1"	"1"	"1"	"666.89178"	"1332.77629"	"1332.77750"	"-0.91"	"-0.00060"	"7/68"	"7"	"68"	"2560045.91992188"	"HCD"	"MS2"	"6.833978"	"184.5"	"100.000"	"74.4555"	"25256"	"25256"	"25244"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"230.6"	""	"187.4"	""	"202.2"	""	"272.7"	""	"379.8"	"486.9"	""	"937"	"46"	"36.000"	"29.000"	"0.00113164340093745"	""	"0"	"0.00298"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EELNQLK"	"[R].eELNqLk.[N]"	"N-Term(TMT6plex); Q5(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q2KN99"	"Cytospin-A OS=Rattus norvegicus OX=10116 GN=Specc1l PE=1 SV=1"	"Q2KN99"	"Cytospin-A OS=Rattus norvegicus OX=10116 GN=Specc1l PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"666.89203"	"1332.77678"	"1332.77750"	"-0.54"	"-0.00036"	"10/56"	"10"	"56"	"472759.34362793"	"HCD"	"MS2"	"29.71541"	"42.5"	"100.000"	"56.4853"	"17966"	"17966"	"17943"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.6"	""	"50.1"	""	"50.8"	""	"66.8"	"1.3"	"87.4"	"92.2"	""	"934"	"13"	"36.000"	"29.000"	"2.24551975726023"	"24"	"0.006639"	"0.07421"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"EQLNQIK"	"[].eqLNqIk.[]"	"N-Term(TMT6plex); Q2(Deamidated); Q5(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"4"	"666.89203"	"1332.77678"	"1332.77750"	"-0.54"	"-0.00036"	"10/58"	"10"	"58"	"472759.34362793"	"HCD"	"MS2"	"29.71541"	"42.5"	"100.000"	"56.4853"	"17966"	"17966"	"17943"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.6"	""	"50.1"	""	"50.8"	""	"66.8"	"1.3"	"87.4"	"92.2"	""	"934"	"13"	"36.000"	"29.000"	"2.24551975726023"	"24"	"0.006639"	"0.07422"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAALEDK"	"[R].dLAALEDk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6383"	"0.0000"	"1"	"1"	"1"	"666.89221"	"1332.77715"	"1332.77750"	"-0.27"	"-0.00018"	"7/68"	"7"	"68"	"1069734.75323486"	"HCD"	"MS2"	"9.414508"	"78.2"	"100.000"	"74.7530"	"25376"	"25376"	"25360"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"80.1"	""	"83.9"	""	"83.1"	""	"108.6"	""	"169.2"	"222.1"	""	"934"	"47"	"36.000"	"29.000"	"0.00104307822806186"	""	"0"	"0.001322"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAALEDK"	"[R].dLAALEDk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6596"	"0.0000"	"1"	"1"	"1"	"666.89221"	"1332.77715"	"1332.77750"	"-0.27"	"-0.00018"	"7/68"	"7"	"68"	"1438665.61090088"	"HCD"	"MS2"	"5.56656"	"103.2"	"100.000"	"74.8564"	"25400"	"25400"	"25388"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.2"	""	"95.8"	""	"119.3"	""	"140.9"	""	"234.2"	"293.2"	""	"934"	"47"	"36.000"	"29.000"	"0.000834289697455909"	""	"0"	"0.001488"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDEHGYISR"	"[R].qDEHGYISR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"667.33826"	"1333.66924"	"1333.66979"	"-0.42"	"-0.00028"	"11/92"	"11"	"92"	"516503.124145508"	"HCD"	"MS2"	"0"	"27.7"	"100.000"	"23.0990"	"4412"	"4412"	"4383"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.4"	""	"19.8"	""	"18.0"	""	"66.3"	""	"84.3"	"56.8"	""	"543"	"13"	"34.000"	"27.000"	"1.29053513843472"	"19"	"0.003922"	"0.04053"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVSEDMLGR"	"[R].tPVSEDMLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"667.35278"	"1333.69829"	"1333.69832"	"-0.02"	"-0.00001"	"9/82"	"9"	"82"	"2856962.78204346"	"HCD"	"MS2"	"5.142159"	"136.1"	"100.000"	"57.9458"	"18576"	"18576"	"18559"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"209.5"	""	"181.6"	""	"194.7"	""	"166.8"	""	"270.6"	"277.4"	""	"747"	"36"	"35.000"	"28.000"	"0.0104301512470215"	"18"	"0"	"0.001335"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVSEDMLGR"	"[R].tPVSEDMLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"667.35284"	"1333.69841"	"1333.69832"	"0.07"	"0.00005"	"8/82"	"8"	"82"	"2341507.73693848"	"HCD"	"MS2"	"9.675858"	"101.0"	"100.000"	"57.6508"	"18455"	"18455"	"18437"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"160.3"	""	"136.0"	""	"147.0"	""	"129.2"	""	"193.5"	"191.7"	""	"747"	"38"	"35.000"	"28.000"	"0.00543613966597365"	"19"	"0"	"0.001372"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVSEDMLGR"	"[R].tPVSEDMLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"667.35297"	"1333.69866"	"1333.69832"	"0.25"	"0.00017"	"8/82"	"8"	"82"	"2170558.00042725"	"HCD"	"MS2"	"14.4876"	"98.7"	"100.000"	"57.8370"	"18516"	"18516"	"18498"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"147.5"	""	"127.8"	""	"140.9"	""	"137.1"	"4.2"	"185.2"	"192.5"	""	"746"	"36"	"35.000"	"28.000"	"0.00936933638953073"	"21"	"0"	"0.0009579"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVSEDMLGR"	"[R].tPVSEDMLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"667.35297"	"1333.69866"	"1333.69832"	"0.25"	"0.00017"	"9/82"	"9"	"82"	"2725060.51751709"	"HCD"	"MS2"	"5.283426"	"124.7"	"100.000"	"58.1390"	"18640"	"18640"	"18623"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"197.6"	""	"175.3"	""	"175.9"	""	"140.8"	""	"247.7"	"246.9"	""	"746"	"36"	"35.000"	"28.000"	"0.010202552349124"	"19"	"0"	"0.0009637"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIMTQNVER"	"[K].nIMTQNVER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"667.35730"	"1333.70732"	"1333.70955"	"-1.67"	"-0.00111"	"6/88"	"6"	"88"	"1058310.96130371"	"HCD"	"MS2"	"19.78474"	"75.9"	"100.000"	"41.3295"	"11810"	"11810"	"11785"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"96.9"	""	"81.1"	""	"93.8"	""	"117.2"	"3.0"	"147.2"	"181.9"	""	"729"	"38"	"35.000"	"28.000"	"0.00613334695260185"	"18"	"0"	"0.0008202"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIMTQNVER"	"[K].nIMTQNVER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"667.35797"	"1333.70867"	"1333.70955"	"-0.66"	"-0.00044"	"7/88"	"7"	"88"	"1064188.40606689"	"HCD"	"MS2"	"31.39385"	"81.2"	"100.000"	"41.5024"	"11871"	"11871"	"11848"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"116.9"	""	"96.5"	""	"86.1"	""	"117.8"	"1.3"	"174.1"	"178.8"	""	"761"	"36"	"35.000"	"28.000"	"0.00921201552283116"	"18"	"0"	"0.0009764"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIEEQTK"	"[K].qIEEQTk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"1"	"667.38806"	"1333.76885"	"1333.77275"	"-2.93"	"-0.00195"	"6/66"	"6"	"66"	"5342001.5647583"	"HCD"	"MS2"	"6.750099"	"394.9"	"100.000"	"33.3173"	"8561"	"8561"	"8550"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"496.6"	""	"335.5"	""	"380.4"	""	"725.1"	"0.4"	"869.1"	"950.3"	""	"913"	"34"	"36.000"	"29.000"	"0.0180900922637608"	""	"0.006189"	"0.07023"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIEEQTK"	"[K].qIEEQTk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.4062"	"0.0000"	"1"	"1"	"1"	"667.38849"	"1333.76970"	"1333.77275"	"-2.29"	"-0.00153"	"6/66"	"6"	"66"	"4073799.86029053"	"HCD"	"MS2"	"0"	"317.5"	"100.000"	"33.3516"	"8568"	"8568"	"8554"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"391.3"	""	"261.6"	""	"282.7"	""	"609.0"	""	"737.4"	"742.5"	""	"889"	"32"	"36.000"	"29.000"	"0.0254607835773201"	""	"0.006308"	"0.07216"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQLETEK"	"[R].qQLETEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"667.38947"	"1333.77165"	"1333.77275"	"-0.82"	"-0.00055"	"12/64"	"12"	"64"	"1226197.67126465"	"HCD"	"MS2"	"5.4632"	"102.3"	"100.000"	"35.7015"	"9524"	"9524"	"9507"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"135.2"	""	"95.2"	""	"105.8"	""	"196.2"	"0.7"	"213.4"	"225.6"	""	"874"	"36"	"36.000"	"29.000"	"0.012259744997849"	""	"0.003358"	"0.03236"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEQETQK"	"[K].iEQETQk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"2"	"2"	"0.4333"	"0.0000"	"1"	"1"	"1"	"667.38953"	"1333.77178"	"1333.77275"	"-0.73"	"-0.00049"	"6/62"	"6"	"62"	"737314.396118164"	"HCD"	"MS2"	"0"	"65.9"	"100.000"	"36.2039"	"9729"	"9729"	"9704"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"86.7"	""	"63.4"	""	"77.8"	""	"109.6"	"1.4"	"156.2"	"131.3"	""	"874"	"30"	"36.000"	"29.000"	"0.0415414294827795"	""	"0.003507"	"0.03594"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQLETEK"	"[R].qQLETEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"667.38971"	"1333.77214"	"1333.77275"	"-0.46"	"-0.00030"	"6/64"	"6"	"64"	"873931.099365234"	"HCD"	"MS2"	"0"	"71.9"	"100.000"	"35.5055"	"9441"	"9441"	"9410"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"105.9"	""	"69.5"	""	"75.1"	""	"134.5"	""	"147.5"	"150.9"	""	"874"	"32"	"36.000"	"29.000"	"0.0303027077229241"	""	"0.003275"	"0.03229"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIEEQTK"	"[K].qIEEQTk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.4412"	"0.0000"	"1"	"1"	"1"	"667.38971"	"1333.77214"	"1333.77275"	"-0.46"	"-0.00030"	"6/66"	"6"	"66"	"6425066.1809082"	"HCD"	"MS2"	"5.286461"	"484.4"	"100.000"	"33.0764"	"8456"	"8456"	"8441"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"681.6"	""	"428.8"	""	"443.5"	""	"936.0"	""	"1077.2"	"1040.7"	""	"874"	"34"	"36.000"	"29.000"	"0.0176799664671782"	""	"0.005309"	"0.06047"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEAQAEK"	"[K].sLEAQAEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"667.38977"	"1333.77226"	"1333.77275"	"-0.37"	"-0.00024"	"12/74"	"12"	"74"	"638591.558105469"	"HCD"	"MS2"	"17.48533"	"56.6"	"100.000"	"40.3819"	"11417"	"11417"	"11397"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.2"	""	"58.7"	""	"78.6"	""	"103.2"	"3.4"	"110.6"	"119.4"	""	"874"	"34"	"36.000"	"29.000"	"0.0158300190308097"	"28"	"0"	"0.00317"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIEEQTK"	"[K].qIEEQTk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3143"	"0.0000"	"1"	"1"	"1"	"667.38977"	"1333.77226"	"1333.77275"	"-0.37"	"-0.00024"	"6/66"	"6"	"66"	"4441218.99499512"	"HCD"	"MS2"	"0"	"335.4"	"100.000"	"33.0323"	"8445"	"8445"	"8427"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"497.9"	""	"312.2"	""	"297.3"	""	"645.5"	"2.6"	"725.1"	"706.3"	""	"874"	"35"	"36.000"	"29.000"	"0.0125453111434479"	""	"0.005001"	"0.05652"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQLETEK"	"[R].qQLETEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"667.39008"	"1333.77287"	"1333.77275"	"0.09"	"0.00006"	"12/64"	"12"	"64"	"1426079.52423096"	"HCD"	"MS2"	"0"	"122.1"	"100.000"	"35.8177"	"9567"	"9567"	"9550"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"162.2"	""	"111.5"	""	"123.2"	""	"230.6"	"1.0"	"256.8"	"275.3"	""	"856"	"36"	"36.000"	"29.000"	"0.0118698100479099"	""	"0.003111"	"0.031"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEAQAEK"	"[K].sLEAQAEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.5306"	"0.0000"	"1"	"1"	"1"	"667.39020"	"1333.77312"	"1333.77275"	"0.28"	"0.00018"	"14/74"	"14"	"74"	"4814451.82507324"	"HCD"	"MS2"	"1.080202"	"354.3"	"100.000"	"40.0762"	"11292"	"11292"	"11273"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"403.7"	""	"362.4"	""	"384.4"	""	"659.2"	""	"706.2"	"851.9"	""	"856"	"49"	"36.000"	"29.000"	"0.000530204939034999"	""	"0"	"0.00252"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEAQAEK"	"[K].sLEAQAEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.5102"	"0.0000"	"1"	"1"	"1"	"667.39020"	"1333.77312"	"1333.77275"	"0.28"	"0.00018"	"14/74"	"14"	"74"	"5610849.62219238"	"HCD"	"MS2"	"0"	"379.1"	"100.000"	"39.9263"	"11240"	"11240"	"11220"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"433.1"	""	"385.9"	""	"407.0"	""	"669.3"	""	"786.7"	"926.3"	""	"856"	"49"	"36.000"	"29.000"	"0.000513385701747935"	""	"0.0001301"	"0.00408"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEAQAEK"	"[K].sLEAQAEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"667.39026"	"1333.77324"	"1333.77275"	"0.37"	"0.00024"	"6/74"	"6"	"74"	"519620.319946289"	"HCD"	"MS2"	"0"	"46.6"	"100.000"	"39.5995"	"11107"	"11107"	"11080"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.5"	""	"41.6"	""	"44.3"	""	"93.3"	""	"99.3"	"113.1"	""	"848"	"18"	"36.000"	"29.000"	"0.68448802809443"	"23"	"0.004867"	"0.05144"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQLETEK"	"[R].qQLETEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"667.39038"	"1333.77349"	"1333.77275"	"0.55"	"0.00037"	"12/64"	"12"	"64"	"1401877.2868042"	"HCD"	"MS2"	"12.17075"	"113.5"	"100.000"	"35.4121"	"9408"	"9408"	"9380"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"154.4"	""	"111.2"	""	"117.1"	""	"239.7"	""	"250.6"	"212.9"	""	"845"	"36"	"36.000"	"29.000"	"0.0114505596447388"	""	"0.002973"	"0.02921"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEQETQK"	"[K].iEQETQk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"667.39087"	"1333.77446"	"1333.77275"	"1.28"	"0.00086"	"6/62"	"6"	"62"	"722703.635314941"	"HCD"	"MS2"	"0"	"59.5"	"100.000"	"36.3956"	"9800"	"9800"	"9776"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.9"	""	"52.2"	""	"66.8"	""	"113.6"	"1.1"	"124.8"	"125.4"	""	"795"	"29"	"35.000"	"29.000"	"0.0506217474704123"	""	"0.003717"	"0.03834"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELFEADPER"	"[R].eLFEADPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"667.84192"	"1334.67656"	"1334.67896"	"-1.80"	"-0.00120"	"7/78"	"7"	"78"	"6595499.58807373"	"HCD"	"MS2"	"5.88754"	"252.4"	"100.000"	"61.7242"	"20083"	"20083"	"20065"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"418.6"	""	"280.0"	""	"293.9"	""	"435.0"	""	"458.6"	"507.0"	""	"652"	"37"	"35.000"	"28.000"	"0.00656474105455138"	"26"	"0"	"0.0012"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELFEADPER"	"[R].eLFEADPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"667.84204"	"1334.67681"	"1334.67896"	"-1.62"	"-0.00108"	"6/78"	"6"	"78"	"561499.880187988"	"HCD"	"MS2"	"100"	"31.4"	"100.000"	"62.0403"	"20209"	"20209"	"20193"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.7"	""	"35.2"	""	"39.6"	""	"50.6"	""	"68.0"	"69.7"	""	"647"	"17"	"35.000"	"28.000"	"0.633686251879188"	"22"	"0.000936"	"0.01241"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELFEADPER"	"[R].eLFEADPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"667.84204"	"1334.67681"	"1334.67896"	"-1.62"	"-0.00108"	"5/78"	"5"	"78"	"1372345.71911621"	"HCD"	"MS2"	"13.40726"	"61.5"	"100.000"	"61.5835"	"20010"	"20010"	"19985"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.2"	""	"63.4"	""	"75.6"	""	"107.2"	"3.0"	"110.9"	"119.0"	""	"647"	"35"	"35.000"	"28.000"	"0.00985994029144654"	"24"	"0.0002479"	"0.005529"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELFEADPER"	"[R].eLFEADPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"667.84259"	"1334.67790"	"1334.67896"	"-0.79"	"-0.00053"	"6/78"	"6"	"78"	"699840.011657715"	"HCD"	"MS2"	"0"	"37.6"	"100.000"	"62.1617"	"20242"	"20242"	"20233"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.7"	""	"38.5"	""	"52.1"	""	"65.3"	""	"71.0"	"83.9"	""	"636"	"30"	"35.000"	"28.000"	"0.0302292324382698"	"24"	"0.0003538"	"0.007445"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELFEADPER"	"[R].eLFEADPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"667.84271"	"1334.67815"	"1334.67896"	"-0.61"	"-0.00041"	"7/78"	"7"	"78"	"6209471.03509521"	"HCD"	"MS2"	"4.486764"	"249.5"	"100.000"	"61.8730"	"20128"	"20128"	"20113"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"384.6"	""	"276.7"	""	"305.4"	""	"404.1"	""	"492.2"	"507.1"	""	"652"	"39"	"35.000"	"28.000"	"0.0045000527026054"	"24"	"0"	"0.0004501"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELFEADPER"	"[R].eLFEADPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"667.84283"	"1334.67839"	"1334.67896"	"-0.43"	"-0.00028"	"5/78"	"5"	"78"	"1235154.76629639"	"HCD"	"MS2"	"0"	"58.5"	"100.000"	"61.4322"	"19964"	"19964"	"19937"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"96.2"	""	"68.5"	""	"71.8"	""	"97.9"	""	"108.6"	"115.7"	""	"654"	"35"	"35.000"	"28.000"	"0.00987524212571459"	"24"	"0.0003538"	"0.007295"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RYDGVQDPR"	"[R].rYDGVQDPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"1"	"3"	"3"	"0.4375"	"0.0000"	"1"	"1"	"1"	"445.57156"	"1334.70014"	"1334.70143"	"-0.97"	"-0.00043"	"8/88"	"8"	"88"	"11116210.3234863"	"HCD"	"MS2"	"67.0204"	"260.9"	"57.979"	"25.2083"	"5273"	"5273"	"5254"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"315.1"	""	"313.6"	""	"342.2"	""	"455.2"	"0.3"	"541.9"	"508.0"	""	"769"	"16"	"35.000"	"28.000"	"0.866754977072608"	"22"	"0.008668"	"0.1084"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SADDSLSGVVR"	"[R].sADDSLSGVVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4K5"	"Lethal(2) giant larvae protein homolog 1 OS=Rattus norvegicus OX=10116 GN=Llgl1 PE=1 SV=1"	"Q8K4K5"	"Lethal(2) giant larvae protein homolog 1 OS=Rattus norvegicus OX=10116 GN=Llgl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"667.85809"	"1334.70891"	"1334.71132"	"-1.81"	"-0.00121"	"15/92"	"15"	"92"	"1319930.07513428"	"HCD"	"MS2"	"41.27771"	"79.5"	"100.000"	"48.7038"	"14810"	"14810"	"14783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"110.1"	""	"106.1"	""	"110.9"	""	"118.4"	"2.1"	"149.7"	"156.3"	""	"844"	"55"	"36.000"	"29.000"	"0.000134682897485252"	"26"	"0"	"2.169E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SADDSLSGVVR"	"[R].sADDSLSGVVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4K5"	"Lethal(2) giant larvae protein homolog 1 OS=Rattus norvegicus OX=10116 GN=Llgl1 PE=1 SV=1"	"Q8K4K5"	"Lethal(2) giant larvae protein homolog 1 OS=Rattus norvegicus OX=10116 GN=Llgl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"667.85956"	"1334.71184"	"1334.71132"	"0.39"	"0.00026"	"9/92"	"9"	"92"	"1225568.98583984"	"HCD"	"MS2"	"43.50687"	"69.0"	"100.000"	"49.0755"	"14949"	"14949"	"14918"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"93.0"	""	"100.0"	""	"91.6"	""	"98.9"	""	"137.7"	"138.3"	""	"888"	"46"	"36.000"	"29.000"	"0.00104564188204983"	"23"	"0"	"6.628E-06"	"0.942"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGLDVLQMK"	"[M].sGGLDVLQmk.[E]"	"N-Term(Prot)(Acetyl); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"667.86249"	"1334.71770"	"1334.71872"	"-0.76"	"-0.00051"	"6/84"	"6"	"84"	"783514.962280273"	"HCD"	"MS2"	"9.535951"	"19.9"	"100.000"	"87.8827"	"30600"	"30600"	"30587"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.1"	""	"14.4"	""	"17.6"	""	"50.8"	""	"49.0"	"43.4"	""	"903"	"46"	"36.000"	"29.000"	"0.00120131736449916"	"28"	"0"	"0.001595"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGLDVLQMK"	"[M].sGGLDVLQmk.[E]"	"N-Term(Prot)(Acetyl); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"667.86261"	"1334.71794"	"1334.71872"	"-0.58"	"-0.00039"	"6/84"	"6"	"84"	"263241.088317871"	"HCD"	"MS2"	"29.11389"	"9.1"	"100.000"	"87.6111"	"30499"	"30499"	"30485"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.9"	""	"8.8"	""	"8.6"	""	"24.4"	""	"22.2"	"12.7"	""	"893"	"36"	"36.000"	"29.000"	"0.0111127479261309"	"21"	"0"	"0.003187"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGLDVLQMK"	"[M].sGGLDVLQmk.[E]"	"N-Term(Prot)(Acetyl); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"667.86304"	"1334.71880"	"1334.71872"	"0.06"	"0.00004"	"9/84"	"9"	"84"	"318983.653076172"	"HCD"	"MS2"	"38.65533"	"9.6"	"100.000"	"87.5998"	"30489"	"30489"	"30472"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.7"	""	"6.3"	""	"11.5"	""	"21.7"	""	"19.7"	"22.9"	""	"897"	"33"	"36.000"	"29.000"	"0.0218656527811369"	"22"	"0"	"0.002992"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGLDVLQMK"	"[M].sGGLDVLQmk.[E]"	"N-Term(Prot)(Acetyl); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"667.86328"	"1334.71929"	"1334.71872"	"0.42"	"0.00028"	"6/84"	"6"	"84"	"818193.982299805"	"HCD"	"MS2"	"4.677609"	"19.1"	"100.000"	"87.8964"	"30611"	"30611"	"30603"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.1"	""	"13.7"	""	"20.8"	""	"47.8"	""	"41.7"	"41.3"	""	"895"	"48"	"36.000"	"29.000"	"0.000648325404461281"	"27"	"0"	"0.0005871"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNNLVSGYPK"	"[K].GGNNLVSGYPk.[R]"	"K11(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"667.86676"	"1334.72624"	"1334.72658"	"-0.25"	"-0.00017"	"7/96"	"7"	"96"	"482557.743713379"	"HCD"	"MS2"	"0"	"30.4"	"100.000"	"45.6063"	"13548"	"13548"	"13518"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.2"	""	"46.6"	""	"43.1"	""	"49.9"	"0.0"	"51.1"	"54.6"	""	"898"	"38"	"36.000"	"29.000"	"0.00767796876475539"	"21"	"0.0002479"	"0.005794"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNNLVSGYPK"	"[K].GGNNLVSGYPk.[R]"	"K11(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"667.86682"	"1334.72637"	"1334.72658"	"-0.16"	"-0.00011"	"6/96"	"6"	"96"	"453893.824829102"	"HCD"	"MS2"	"22.63155"	"28.5"	"100.000"	"45.7513"	"13595"	"13595"	"13566"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.2"	""	"36.0"	""	"42.6"	""	"39.8"	"0.2"	"55.9"	"51.5"	""	"898"	"28"	"36.000"	"29.000"	"0.0693819243352748"	"22"	"0.000936"	"0.01144"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETIEQEK"	"[K].eTIEQEk.[QR]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329; P63312"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2; Thymosin beta-10 OS=Rattus norvegicus OX=10116 GN=Tmsb10 PE=1 SV=2"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"667.88129"	"1334.75530"	"1334.75677"	"-1.10"	"-0.00074"	"12/62"	"12"	"62"	"2829429.42449951"	"HCD"	"MS2"	"21.9418"	"214.9"	"100.000"	"36.8459"	"9984"	"9984"	"9956"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"360.0"	""	"224.2"	""	"246.1"	""	"351.9"	"3.8"	"435.6"	"416.7"	""	"934"	"34"	"36.000"	"29.000"	"0.0193337848140814"	""	"0.004069"	"0.04383"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVLEDDK"	"[R].sAVLEDDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"667.88141"	"1334.75554"	"1334.75677"	"-0.92"	"-0.00061"	"7/68"	"7"	"68"	"646495.161376953"	"HCD"	"MS2"	"22.68417"	"54.4"	"100.000"	"47.1329"	"14169"	"14169"	"14142"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"85.3"	""	"57.6"	""	"62.7"	""	"85.6"	"0.2"	"122.5"	"103.0"	""	"924"	"45"	"36.000"	"29.000"	"0.00150883578463619"	"27"	"0"	"0.001909"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETIEQEK"	"[K].eTIEQEk.[QR]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329; P63312"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2; Thymosin beta-10 OS=Rattus norvegicus OX=10116 GN=Tmsb10 PE=1 SV=2"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"667.88147"	"1334.75566"	"1334.75677"	"-0.83"	"-0.00055"	"12/62"	"12"	"62"	"3693469.22283936"	"HCD"	"MS2"	"13.00888"	"279.7"	"100.000"	"36.6657"	"9916"	"9916"	"9891"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"464.2"	""	"285.3"	""	"333.4"	""	"426.1"	""	"589.8"	"558.3"	""	"926"	"32"	"36.000"	"29.000"	"0.0268893925312367"	"26"	"0.005119"	"0.05809"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTQEEK"	"[R].eLTQEEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63186"	"Translation initiation factor eIF-2B subunit delta OS=Rattus norvegicus OX=10116 GN=Eif2b4 PE=2 SV=1"	"Q63186"	"Translation initiation factor eIF-2B subunit delta OS=Rattus norvegicus OX=10116 GN=Eif2b4 PE=2 SV=1"	"0"	"2"	"2"	"0.4848"	"0.0000"	"1"	"1"	"1"	"667.88153"	"1334.75578"	"1334.75677"	"-0.74"	"-0.00049"	"12/64"	"12"	"64"	"305549.198303223"	"HCD"	"MS2"	"0"	"27.7"	"100.000"	"38.0530"	"10468"	"10468"	"10447"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.1"	""	"22.5"	""	"28.5"	""	"58.0"	""	"55.9"	"58.3"	""	"926"	"33"	"36.000"	"29.000"	"0.0208248072815592"	""	"0.001374"	"0.01592"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTPEEVK"	"[K].sSTPEEVk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"667.88153"	"1334.75578"	"1334.75677"	"-0.74"	"-0.00049"	"7/66"	"7"	"66"	"3071722.484375"	"HCD"	"MS2"	"0"	"223.9"	"100.000"	"32.9173"	"8398"	"8398"	"8379"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"310.0"	""	"232.0"	""	"263.6"	""	"396.3"	""	"481.6"	"448.6"	""	"926"	"45"	"36.000"	"29.000"	"0.00143080678525379"	"28"	"0.007627"	"0.09392"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVLEDDK"	"[R].sAVLEDDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"667.88165"	"1334.75603"	"1334.75677"	"-0.55"	"-0.00037"	"7/68"	"7"	"68"	"536989.344482422"	"HCD"	"MS2"	"0"	"50.7"	"100.000"	"47.4083"	"14270"	"14270"	"14241"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.3"	""	"52.3"	""	"71.2"	""	"76.7"	""	"119.9"	"96.7"	""	"926"	"26"	"36.000"	"29.000"	"0.111578621348189"	"23"	"0.0003538"	"0.007446"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTPEEVK"	"[K].sSTPEEVk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"667.88165"	"1334.75603"	"1334.75677"	"-0.55"	"-0.00037"	"7/66"	"7"	"66"	"3138144.39691162"	"HCD"	"MS2"	"0"	"221.9"	"100.000"	"32.5979"	"8269"	"8269"	"8243"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"330.0"	""	"262.3"	""	"244.9"	""	"403.7"	""	"451.9"	"415.5"	""	"926"	"45"	"36.000"	"29.000"	"0.00137271693334977"	"26"	"0.00736"	"0.08561"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTPEEVK"	"[K].sSTPEEVk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"667.88177"	"1334.75627"	"1334.75677"	"-0.37"	"-0.00025"	"7/66"	"7"	"66"	"4119610.30133057"	"HCD"	"MS2"	"0"	"281.4"	"100.000"	"32.9084"	"8388"	"8388"	"8372"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"401.4"	""	"279.5"	""	"337.6"	""	"494.9"	""	"590.5"	"568.8"	""	"926"	"45"	"36.000"	"29.000"	"0.0013758813726947"	"26"	"0.008641"	"0.1067"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTPEEVK"	"[K].sSTPEEVk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"667.88184"	"1334.75640"	"1334.75677"	"-0.28"	"-0.00019"	"7/66"	"7"	"66"	"2795247.10522461"	"HCD"	"MS2"	"0"	"194.8"	"100.000"	"32.6144"	"8269"	"8269"	"8243"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"313.8"	"2.6"	"218.9"	""	"224.0"	""	"343.6"	"0.5"	"371.7"	"372.0"	""	"928"	"45"	"36.000"	"29.000"	"0.0014338970806863"	"26"	"0.006189"	"0.07072"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETIEQEK"	"[K].eTIEQEk.[QR]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329; P63312"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2; Thymosin beta-10 OS=Rattus norvegicus OX=10116 GN=Tmsb10 PE=1 SV=2"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"667.88257"	"1334.75786"	"1334.75677"	"0.82"	"0.00055"	"7/62"	"7"	"62"	"2890941.82141113"	"HCD"	"MS2"	"14.56599"	"217.8"	"100.000"	"37.1657"	"10114"	"10114"	"10095"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"298.0"	""	"213.9"	""	"247.1"	""	"344.8"	""	"483.4"	"486.6"	""	"902"	"25"	"36.000"	"29.000"	"0.135574041248533"	"28"	"0.006769"	"0.07885"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTEETVK"	"[K].aVTEETVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"667.89899"	"1334.79070"	"1334.79315"	"-1.84"	"-0.00123"	"14/62"	"14"	"62"	"1706584.09729004"	"HCD"	"MS2"	"14.80901"	"132.1"	"100.000"	"41.8750"	"12032"	"12032"	"12015"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"182.1"	""	"166.7"	""	"201.5"	""	"202.4"	""	"257.5"	"242.2"	""	"816"	"48"	"36.000"	"29.000"	"0.000630463811331673"	"23"	"0"	"0.002996"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAESVLK"	"[K].eTAESVLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"667.89984"	"1334.79241"	"1334.79315"	"-0.56"	"-0.00037"	"14/64"	"14"	"64"	"1457514.35571289"	"HCD"	"MS2"	"20.59717"	"110.4"	"100.000"	"52.4350"	"16330"	"16330"	"16312"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"132.3"	""	"124.5"	""	"133.4"	""	"197.8"	""	"234.3"	"227.3"	""	"809"	"48"	"36.000"	"29.000"	"0.00057798760621774"	"29"	"0"	"0.001415"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAESVLK"	"[K].eTAESVLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"667.90009"	"1334.79289"	"1334.79315"	"-0.19"	"-0.00013"	"7/64"	"7"	"64"	"1392084.52807617"	"HCD"	"MS2"	"21.09134"	"103.9"	"100.000"	"52.7373"	"16442"	"16442"	"16423"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"145.8"	""	"105.1"	""	"123.0"	""	"183.7"	"0.4"	"218.4"	"209.7"	""	"809"	"41"	"36.000"	"29.000"	"0.00295065562897973"	"26"	"0"	"0.002743"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAESVLK"	"[K].eTAESVLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"667.90015"	"1334.79302"	"1334.79315"	"-0.10"	"-0.00007"	"7/64"	"7"	"64"	"926692.198181152"	"HCD"	"MS2"	"29.40176"	"76.1"	"100.000"	"52.4129"	"16310"	"16310"	"16284"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.1"	""	"99.2"	""	"102.2"	""	"122.7"	"1.9"	"155.6"	"136.4"	""	"782"	"47"	"35.000"	"28.000"	"0.00084173765827723"	""	"0"	"0.001772"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTEETVK"	"[K].aVTEETVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.7551"	"0.0000"	"1"	"1"	"1"	"667.90021"	"1334.79314"	"1334.79315"	"-0.01"	"-0.00001"	"14/62"	"14"	"62"	"2706756.94232178"	"HCD"	"MS2"	"28.35181"	"210.4"	"100.000"	"41.5756"	"11910"	"11910"	"11889"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"327.3"	""	"314.1"	""	"292.9"	""	"324.4"	""	"372.0"	"365.1"	""	"782"	"49"	"35.000"	"28.000"	"0.000507197094954727"	"27"	"0"	"0.002498"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAESVLK"	"[K].eTAESVLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"667.90027"	"1334.79326"	"1334.79315"	"0.08"	"0.00005"	"14/64"	"14"	"64"	"1217555.88549805"	"HCD"	"MS2"	"12.30424"	"96.0"	"100.000"	"52.1451"	"16212"	"16212"	"16188"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"129.9"	""	"124.5"	""	"114.2"	""	"162.9"	""	"191.9"	"188.7"	""	"782"	"49"	"35.000"	"28.000"	"0.000538488902337533"	""	"0"	"0.001303"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTEETVK"	"[K].aVTEETVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.7551"	"0.0000"	"1"	"1"	"1"	"667.90051"	"1334.79375"	"1334.79315"	"0.45"	"0.00030"	"14/62"	"14"	"62"	"3467082.94616699"	"HCD"	"MS2"	"23.99734"	"256.1"	"100.000"	"41.7692"	"11979"	"11979"	"11954"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"408.9"	""	"351.2"	""	"376.7"	""	"407.0"	""	"443.8"	"437.9"	""	"780"	"49"	"35.000"	"28.000"	"0.00048424439996104"	"27"	"0"	"0.00163"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTEETVK"	"[K].aVTEETVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"667.90057"	"1334.79387"	"1334.79315"	"0.54"	"0.00036"	"11/62"	"11"	"62"	"1174864.64282227"	"HCD"	"MS2"	"30.4466"	"96.7"	"100.000"	"42.0753"	"12104"	"12104"	"12081"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"132.2"	""	"117.0"	""	"152.0"	""	"119.3"	""	"193.0"	"204.7"	""	"780"	"31"	"35.000"	"28.000"	"0.0344401161163239"	"23"	"0.0003538"	"0.007274"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTDEMVELR"	"[R].nTDEMVELR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"668.34119"	"1335.67510"	"1335.67758"	"-1.86"	"-0.00124"	"7/90"	"7"	"90"	"1575104.48925781"	"HCD"	"MS2"	"0"	"86.6"	"100.000"	"52.7985"	"16479"	"16479"	"16449"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"130.0"	""	"118.0"	""	"108.5"	""	"111.6"	"0.8"	"176.9"	"175.6"	""	"693"	"43"	"35.000"	"28.000"	"0.00180178612798863"	"25"	"0"	"0.0005472"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTDEMVELR"	"[R].nTDEMVELR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"668.34119"	"1335.67510"	"1335.67758"	"-1.86"	"-0.00124"	"14/90"	"14"	"90"	"3474427.09680176"	"HCD"	"MS2"	"0"	"169.1"	"100.000"	"53.3494"	"16692"	"16692"	"16674"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"251.9"	""	"198.2"	""	"221.9"	""	"231.8"	"6.0"	"339.3"	"356.0"	""	"693"	"36"	"35.000"	"28.000"	"0.00882476682520717"	""	"0"	"0.003006"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTDEMVELR"	"[R].nTDEMVELR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"668.34143"	"1335.67558"	"1335.67758"	"-1.49"	"-0.00100"	"14/90"	"14"	"90"	"3350422.36651611"	"HCD"	"MS2"	"0"	"161.0"	"100.000"	"53.0839"	"16595"	"16595"	"16577"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"240.6"	""	"200.3"	""	"215.9"	""	"218.7"	"3.7"	"309.8"	"337.7"	""	"691"	"36"	"35.000"	"28.000"	"0.00888071742946644"	""	"0"	"0.002022"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTDEMVELR"	"[R].nTDEMVELR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"668.34167"	"1335.67607"	"1335.67758"	"-1.13"	"-0.00075"	"7/90"	"7"	"90"	"1236397.49420166"	"HCD"	"MS2"	"26.55625"	"75.4"	"100.000"	"53.0617"	"16575"	"16575"	"16547"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"128.4"	""	"101.9"	""	"101.7"	""	"100.4"	""	"141.1"	"141.5"	""	"738"	"25"	"35.000"	"28.000"	"0.128536469248288"	"15"	"0.001211"	"0.01434"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEDMLITGGR"	"[R].dEDMLITGGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"668.34235"	"1335.67742"	"1335.67758"	"-0.12"	"-0.00008"	"6/84"	"6"	"84"	"739152.734832764"	"HCD"	"MS2"	"0"	"48.3"	"100.000"	"60.6127"	"19615"	"19615"	"19605"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.6"	""	"54.4"	""	"59.4"	""	"80.1"	""	"106.8"	"97.9"	""	"729"	"35"	"35.000"	"28.000"	"0.0107324168551965"	""	"0"	"0.00107"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEDMLITGGR"	"[R].dEDMLITGGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.3250"	"0.0000"	"1"	"1"	"1"	"668.34363"	"1335.67998"	"1335.67758"	"1.80"	"0.00120"	"8/84"	"8"	"84"	"714660.990722656"	"HCD"	"MS2"	"0"	"41.4"	"100.000"	"60.3991"	"19544"	"19544"	"19528"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.7"	""	"43.1"	""	"45.0"	""	"75.4"	"0.1"	"84.2"	"88.6"	""	"753"	"40"	"35.000"	"28.000"	"0.00363718155939665"	""	"0"	"0.0003519"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTMQNLNDR"	"[K].vTmQNLNDR.[L]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"5"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFV3; Q6IFW8; Q6IFV1; Q6IFW6; Q6IFX0"	"Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 27 OS=Rattus norvegicus OX=10116 GN=Krt27 PE=3 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1; Keratin, type I cytoskeletal 25 OS=Rattus norvegicus OX=10116 GN=Krt25 PE=3 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"668.34808"	"1335.68889"	"1335.68882"	"0.06"	"0.00004"	"8/86"	"8"	"86"	"1012651.56726074"	"HCD"	"MS2"	"31.56335"	"53.8"	"100.000"	"29.5299"	"7026"	"7026"	"7006"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"115.2"	""	"57.3"	""	"77.1"	""	"79.9"	""	"92.9"	"88.7"	""	"835"	"40"	"36.000"	"29.000"	"0.00441221310096703"	"20"	"0.0002479"	"0.005049"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTMQNLNDR"	"[K].vTmQNLNDR.[L]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"5"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFV3; Q6IFW8; Q6IFV1; Q6IFW6; Q6IFX0"	"Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 27 OS=Rattus norvegicus OX=10116 GN=Krt27 PE=3 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1; Keratin, type I cytoskeletal 25 OS=Rattus norvegicus OX=10116 GN=Krt25 PE=3 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"668.34967"	"1335.69206"	"1335.68882"	"2.43"	"0.00162"	"8/86"	"8"	"86"	"835984.380249023"	"HCD"	"MS2"	"0"	"47.4"	"100.000"	"29.5420"	"7019"	"7019"	"6998"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"101.4"	""	"44.3"	""	"68.4"	""	"72.7"	""	"82.2"	"82.3"	""	"847"	"27"	"36.000"	"29.000"	"0.0821965169160541"	"15"	"0.009021"	"0.1167"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEGTPEGLYL"	"[K].qEGTPEGLYL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.35278"	"1335.69829"	"1335.69936"	"-0.80"	"-0.00054"	"6/80"	"6"	"80"	"340267.175231934"	"HCD"	"MS2"	"21.98687"	"9.4"	"100.000"	"92.5881"	"32411"	"32411"	"32402"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.8"	""	"8.4"	""	"13.5"	""	"21.4"	""	"20.8"	"15.4"	""	"878"	"41"	"36.000"	"29.000"	"0.00340772484199995"	"15"	"0.001546"	"0.01868"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEGTPEGLYL"	"[K].qEGTPEGLYL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.35315"	"1335.69902"	"1335.69936"	"-0.25"	"-0.00017"	"6/80"	"6"	"80"	"346640.37677002"	"HCD"	"MS2"	"15.84371"	"10.9"	"100.000"	"92.6033"	"32429"	"32429"	"32415"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.4"	""	"15.2"	""	"9.6"	""	"21.0"	""	"23.2"	"24.8"	""	"918"	"31"	"36.000"	"29.000"	"0.0337919057750084"	"14"	"0.002056"	"0.02255"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAEQMAK"	"[R].aEAEQMAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"668.36993"	"1335.73259"	"1335.73426"	"-1.25"	"-0.00083"	"7/66"	"7"	"66"	"1782066.92047119"	"HCD"	"MS2"	"23.33944"	"182.0"	"100.000"	"37.1163"	"10100"	"10100"	"10074"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"184.5"	""	"156.9"	""	"164.6"	""	"261.9"	""	"375.4"	"604.8"	""	"970"	"29"	"36.000"	"29.000"	"0.059120995547856"	"21"	"0.000936"	"0.01293"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIFQETAR"	"[K].eLIFQETAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"668.37659"	"1335.74590"	"1335.74698"	"-0.81"	"-0.00054"	"7/84"	"7"	"84"	"1328019.60449219"	"HCD"	"MS2"	"10.1767"	"65.5"	"100.000"	"70.1599"	"23494"	"23494"	"23477"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"79.6"	""	"81.0"	""	"86.1"	""	"109.9"	"3.1"	"128.0"	"134.0"	""	"934"	"39"	"36.000"	"29.000"	"0.00525190522842555"	"23"	"0"	"0.0005421"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIFQETAR"	"[K].eLIFQETAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"668.37665"	"1335.74602"	"1335.74698"	"-0.72"	"-0.00048"	"7/84"	"7"	"84"	"1328706.89593506"	"HCD"	"MS2"	"36.81133"	"64.2"	"100.000"	"69.7684"	"23348"	"23348"	"23326"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"82.1"	""	"68.8"	""	"89.1"	""	"106.6"	"0.7"	"131.8"	"130.0"	""	"932"	"39"	"36.000"	"29.000"	"0.00557681087589175"	"22"	"0"	"0.0007981"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIFQETAR"	"[K].eLIFQETAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"668.37695"	"1335.74663"	"1335.74698"	"-0.26"	"-0.00018"	"7/84"	"7"	"84"	"999029.694946289"	"HCD"	"MS2"	"45.98984"	"50.3"	"100.000"	"69.8671"	"23374"	"23374"	"23355"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"71.8"	""	"64.6"	""	"59.1"	""	"86.3"	"0.3"	"97.9"	"96.9"	""	"936"	"36"	"36.000"	"29.000"	"0.0129195043671112"	"23"	"0"	"0.0007026"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEQSDAK"	"[K].iSEQSDAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"668.37738"	"1335.74748"	"1335.75202"	"-3.39"	"-0.00227"	"7/72"	"7"	"72"	"3654353.06072998"	"HCD"	"MS2"	"12.12784"	"284.5"	"100.000"	"33.4985"	"8628"	"8628"	"8606"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"459.3"	""	"349.4"	""	"344.1"	""	"478.7"	""	"532.4"	"533.0"	""	"924"	"45"	"36.000"	"29.000"	"0.00156546000136311"	"21"	"0.0003538"	"0.007002"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEQSDAK"	"[K].iSEQSDAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"668.37750"	"1335.74773"	"1335.75202"	"-3.21"	"-0.00214"	"7/72"	"7"	"72"	"3138718.33197021"	"HCD"	"MS2"	"11.50933"	"247.2"	"100.000"	"33.4708"	"8623"	"8623"	"8607"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"379.5"	""	"300.7"	"2.9"	"286.3"	""	"436.6"	""	"470.9"	"471.0"	""	"934"	"45"	"36.000"	"29.000"	"0.0014870202426461"	"21"	"0.0001301"	"0.004817"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEQSDAK"	"[K].iSEQSDAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"668.37939"	"1335.75151"	"1335.75202"	"-0.38"	"-0.00025"	"7/72"	"7"	"72"	"1485954.2532959"	"HCD"	"MS2"	"0"	"123.2"	"100.000"	"33.8017"	"8757"	"8757"	"8731"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"178.3"	""	"122.4"	""	"157.5"	""	"218.9"	""	"256.5"	"244.3"	""	"897"	"43"	"36.000"	"29.000"	"0.00245336659357946"	"21"	"0"	"0.002756"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEQSDAK"	"[K].iSEQSDAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"668.37976"	"1335.75224"	"1335.75202"	"0.17"	"0.00011"	"7/72"	"7"	"72"	"1292146.41363525"	"HCD"	"MS2"	"2.919812"	"110.6"	"100.000"	"33.8272"	"8761"	"8761"	"8737"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"153.9"	""	"123.8"	""	"152.0"	""	"171.0"	""	"227.6"	"224.3"	""	"870"	"42"	"36.000"	"29.000"	"0.00245747584043352"	"20"	"0"	"0.002792"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWGSGSDTLR"	"[R].eWGSGSDTLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"668.83728"	"1336.66728"	"1336.66946"	"-1.63"	"-0.00109"	"8/86"	"8"	"86"	"2661891.87878418"	"HCD"	"MS2"	"45.83185"	"123.1"	"100.000"	"49.5172"	"15129"	"15129"	"15105"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"173.3"	""	"144.6"	""	"174.2"	""	"220.9"	""	"232.9"	"221.3"	""	"636"	"41"	"35.000"	"28.000"	"0.00249130626399655"	"22"	"0"	"0.0001321"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWGSGSDTLR"	"[R].eWGSGSDTLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"668.83728"	"1336.66728"	"1336.66946"	"-1.63"	"-0.00109"	"8/86"	"8"	"86"	"2871334.07354736"	"HCD"	"MS2"	"41.29371"	"137.3"	"100.000"	"49.1618"	"14996"	"14996"	"14976"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"218.3"	""	"167.5"	""	"182.1"	""	"227.8"	""	"266.0"	"240.1"	""	"636"	"44"	"35.000"	"28.000"	"0.00122300186690423"	"26"	"0"	"0.0001055"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWGSGSDTLR"	"[R].eWGSGSDTLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"668.83813"	"1336.66899"	"1336.66946"	"-0.35"	"-0.00023"	"8/86"	"8"	"86"	"3182721.60168457"	"HCD"	"MS2"	"25.22948"	"207.0"	"100.000"	"49.4496"	"15113"	"15113"	"15095"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"299.0"	""	"262.7"	""	"279.0"	""	"331.2"	""	"396.0"	"397.4"	""	"633"	"33"	"35.000"	"28.000"	"0.0141701260771819"	"26"	"0"	"0.0002097"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWGSGSDTLR"	"[R].eWGSGSDTLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"668.83826"	"1336.66924"	"1336.66946"	"-0.17"	"-0.00011"	"8/86"	"8"	"86"	"2810527.40478516"	"HCD"	"MS2"	"24.20692"	"183.5"	"100.000"	"49.8051"	"15247"	"15247"	"15232"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"253.1"	""	"225.1"	""	"250.5"	""	"292.1"	""	"377.9"	"345.7"	""	"635"	"30"	"35.000"	"28.000"	"0.0321916864971396"	"23"	"0"	"0.0002576"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILMSALEEE"	"[K].gILmSALEEE.[-]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q91XU8"	"Phosphatidate cytidylyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Cds2 PE=1 SV=1"	"Q91XU8"	"Phosphatidate cytidylyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Cds2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.84589"	"1336.68450"	"1336.68675"	"-1.69"	"-0.00113"	"5/84"	"5"	"84"	"105963.31854248"	"HCD"	"MS2"	"35.31145"	"3.6"	"100.000"	"98.3186"	"34479"	"34479"	"34475"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.4"	""	"4.6"	""	"4.4"	""	"4.7"	""	"8.5"	"7.8"	""	"759"	"16"	"35.000"	"28.000"	"0.899936321298598"	"14"	"0.004942"	"0.05511"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILMSALEEE"	"[K].gILmSALEEE.[-]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q91XU8"	"Phosphatidate cytidylyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Cds2 PE=1 SV=1"	"Q91XU8"	"Phosphatidate cytidylyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Cds2 PE=1 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"668.84631"	"1336.68535"	"1336.68675"	"-1.05"	"-0.00070"	"5/84"	"5"	"84"	"102012.517578125"	"HCD"	"MS2"	"19.42304"	"2.5"	"100.000"	"98.3470"	"34457"	"34457"	"34453"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	"2.2"	""	"3.0"	""	"6.3"	""	"6.3"	"6.6"	""	"764"	"25"	"35.000"	"28.000"	"0.109411598450431"	"16"	"0.0002479"	"0.005456"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILMSALEEE"	"[K].gILmSALEEE.[-]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q91XU8"	"Phosphatidate cytidylyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Cds2 PE=1 SV=1"	"Q91XU8"	"Phosphatidate cytidylyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Cds2 PE=1 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"668.84656"	"1336.68584"	"1336.68675"	"-0.68"	"-0.00046"	"5/84"	"5"	"84"	"122369.921569824"	"HCD"	"MS2"	"23.57707"	"3.0"	"100.000"	"97.0631"	"34034"	"34034"	"34025"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	"3.6"	""	"5.1"	""	"7.2"	""	"6.9"	"5.8"	""	"760"	"21"	"35.000"	"28.000"	"0.307456441687785"	"15"	"0.002547"	"0.02549"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILMSALEEE"	"[K].gILmSALEEE.[-]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q91XU8"	"Phosphatidate cytidylyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Cds2 PE=1 SV=1"	"Q91XU8"	"Phosphatidate cytidylyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Cds2 PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"668.84735"	"1336.68743"	"1336.68675"	"0.51"	"0.00034"	"6/84"	"6"	"84"	"105259.256164551"	"HCD"	"MS2"	"26.79375"	"3.2"	"100.000"	"96.9782"	"34024"	"34024"	"34018"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.3"	""	"2.7"	""	"5.2"	""	"3.3"	""	"7.4"	"8.7"	""	"748"	"17"	"35.000"	"28.000"	"0.691626463497802"	"15"	"0.000936"	"0.01258"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"668.85095"	"1336.69463"	"1336.69798"	"-2.51"	"-0.00168"	"7/76"	"7"	"76"	"316788.15826416"	"HCD"	"MS2"	"21.3932"	"14.6"	"100.000"	"80.4553"	"27667"	"27667"	"27643"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.6"	""	"15.3"	""	"19.2"	""	"21.5"	""	"30.8"	"26.2"	""	"757"	"22"	"35.000"	"28.000"	"0.231241556426759"	"14"	"0.005001"	"0.05608"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"668.85162"	"1336.69597"	"1336.69798"	"-1.51"	"-0.00101"	"8/76"	"8"	"76"	"1189381.1348877"	"HCD"	"MS2"	"5.861859"	"43.8"	"100.000"	"72.5011"	"24448"	"24448"	"24425"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.5"	""	"49.8"	""	"51.2"	""	"110.4"	"1.6"	"77.2"	"70.4"	""	"785"	"34"	"35.000"	"28.000"	"0.0163998418908799"	"16"	"0.000936"	"0.01208"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"668.85168"	"1336.69609"	"1336.69798"	"-1.41"	"-0.00095"	"7/76"	"7"	"76"	"261658.418518066"	"HCD"	"MS2"	"14.70107"	"11.9"	"100.000"	"83.3346"	"28815"	"28815"	"28806"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.4"	""	"17.7"	""	"21.1"	""	"14.2"	""	"20.8"	"22.1"	""	"785"	"24"	"35.000"	"28.000"	"0.152700219410255"	"17"	"0.004867"	"0.05236"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.85168"	"1336.69609"	"1336.69798"	"-1.41"	"-0.00095"	"6/76"	"6"	"76"	"334074.696472168"	"HCD"	"MS2"	"23.5464"	"15.0"	"100.000"	"79.5064"	"27286"	"27286"	"27265"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.8"	""	"18.3"	""	"19.7"	""	"24.5"	""	"29.0"	"28.6"	""	"785"	"23"	"35.000"	"28.000"	"0.184858600610804"	"14"	"0.0023"	"0.02413"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.85175"	"1336.69621"	"1336.69798"	"-1.32"	"-0.00088"	"6/76"	"6"	"76"	"202268.25958252"	"HCD"	"MS2"	"15.0576"	"7.9"	"100.000"	"87.5047"	"30457"	"30457"	"30434"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.0"	""	"10.4"	""	"13.2"	""	"8.7"	""	"13.1"	"16.7"	""	"768"	"27"	"35.000"	"28.000"	"0.0741875833734499"	"14"	"0.002973"	"0.02955"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.85181"	"1336.69634"	"1336.69798"	"-1.23"	"-0.00082"	"6/76"	"6"	"76"	"232468.780395508"	"HCD"	"MS2"	"26.67138"	"11.1"	"100.000"	"85.5883"	"29700"	"29700"	"29687"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.4"	""	"14.1"	""	"17.4"	""	"14.0"	""	"17.8"	"21.4"	""	"769"	"19"	"35.000"	"28.000"	"0.477415312269282"	"14"	"0.004817"	"0.05065"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"668.85187"	"1336.69646"	"1336.69798"	"-1.14"	"-0.00076"	"6/76"	"6"	"76"	"237638.312133789"	"HCD"	"MS2"	"25.51798"	"12.7"	"100.000"	"84.8919"	"29429"	"29429"	"29415"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.6"	""	"18.3"	""	"16.6"	""	"18.5"	""	"24.5"	"19.5"	""	"773"	"19"	"35.000"	"28.000"	"0.483225115179149"	"19"	"0.004542"	"0.04906"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"668.85187"	"1336.69646"	"1336.69798"	"-1.14"	"-0.00076"	"6/76"	"6"	"76"	"1135267.41870117"	"HCD"	"MS2"	"4.526413"	"39.0"	"100.000"	"72.3680"	"24407"	"24407"	"24389"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.5"	""	"36.2"	""	"41.5"	""	"101.8"	""	"76.3"	"67.8"	""	"773"	"31"	"35.000"	"28.000"	"0.0285199984944898"	"21"	"0.001546"	"0.01938"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"668.85193"	"1336.69658"	"1336.69798"	"-1.05"	"-0.00070"	"6/76"	"6"	"76"	"356427.301086426"	"HCD"	"MS2"	"10.21105"	"18.7"	"100.000"	"80.1438"	"27541"	"27541"	"27526"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.8"	""	"22.8"	""	"25.1"	""	"32.1"	""	"35.6"	"32.9"	""	"774"	"19"	"35.000"	"28.000"	"0.472836468483805"	"22"	"0.004022"	"0.04273"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"668.85193"	"1336.69658"	"1336.69798"	"-1.05"	"-0.00070"	"7/76"	"7"	"76"	"487017.714538574"	"HCD"	"MS2"	"40.4573"	"17.3"	"100.000"	"77.6113"	"26517"	"26517"	"26493"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.1"	""	"23.7"	""	"25.4"	""	"27.2"	""	"27.9"	"34.2"	""	"774"	"9"	"35.000"	"28.000"	"4.9398181900999"	"14"	"0.008478"	"0.1034"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.85205"	"1336.69682"	"1336.69798"	"-0.87"	"-0.00058"	"5/76"	"5"	"76"	"287737.507446289"	"HCD"	"MS2"	"36.59719"	"10.8"	"100.000"	"86.3671"	"30006"	"30006"	"29991"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.8"	""	"17.7"	""	"10.0"	""	"16.3"	""	"24.1"	"21.0"	""	"774"	"15"	"35.000"	"28.000"	"1.36053890484451"	"13"	"0.003449"	"0.03479"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.85205"	"1336.69682"	"1336.69798"	"-0.87"	"-0.00058"	"7/76"	"7"	"76"	"445063.802124023"	"HCD"	"MS2"	"52.99841"	"21.0"	"100.000"	"83.9065"	"29039"	"29039"	"29027"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.9"	""	"30.8"	""	"26.9"	""	"41.4"	""	"32.4"	"39.1"	""	"774"	"18"	"35.000"	"28.000"	"0.596638075291479"	"14"	"0.003449"	"0.03487"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.85211"	"1336.69695"	"1336.69798"	"-0.77"	"-0.00052"	"7/76"	"7"	"76"	"278012.190002441"	"HCD"	"MS2"	"27.0323"	"11.8"	"100.000"	"82.3087"	"28412"	"28412"	"28393"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.1"	""	"15.1"	""	"19.5"	""	"16.2"	""	"18.0"	"22.5"	""	"774"	"32"	"35.000"	"28.000"	"0.0227882494622613"	"15"	"0.002056"	"0.02258"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"668.85211"	"1336.69695"	"1336.69798"	"-0.77"	"-0.00052"	"9/76"	"9"	"76"	"310869.115783691"	"HCD"	"MS2"	"13.38834"	"15.0"	"100.000"	"82.4837"	"28479"	"28479"	"28464"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.3"	""	"23.6"	""	"18.5"	""	"21.4"	""	"24.6"	"34.4"	""	"774"	"23"	"35.000"	"28.000"	"0.183109537218093"	"18"	"0.004606"	"0.04964"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"668.85217"	"1336.69707"	"1336.69798"	"-0.68"	"-0.00046"	"5/76"	"5"	"76"	"245680.270141602"	"HCD"	"MS2"	"59.98798"	"11.2"	"100.000"	"89.0664"	"31057"	"31057"	"31038"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.1"	""	"15.3"	""	"14.5"	""	"18.7"	""	"21.9"	"22.3"	""	"763"	"14"	"35.000"	"28.000"	"1.57577622009247"	"22"	"0.005309"	"0.05954"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"668.85217"	"1336.69707"	"1336.69798"	"-0.68"	"-0.00046"	"8/76"	"8"	"76"	"270195.963928223"	"HCD"	"MS2"	"10.24059"	"12.1"	"100.000"	"83.1896"	"28760"	"28760"	"28743"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.9"	""	"19.1"	""	"20.9"	""	"15.9"	""	"23.6"	"18.1"	""	"763"	"36"	"35.000"	"28.000"	"0.00938630240982319"	"16"	"0.0023"	"0.02291"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"668.85217"	"1336.69707"	"1336.69798"	"-0.68"	"-0.00046"	"7/76"	"7"	"76"	"372873.482421875"	"HCD"	"MS2"	"24.87424"	"17.3"	"100.000"	"80.9968"	"27885"	"27885"	"27867"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.4"	""	"18.6"	""	"21.8"	""	"30.3"	""	"32.3"	"35.7"	""	"763"	"24"	"35.000"	"28.000"	"0.162740086422808"	"15"	"0.002547"	"0.0255"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"668.85223"	"1336.69719"	"1336.69798"	"-0.59"	"-0.00040"	"7/76"	"7"	"76"	"290813.856384277"	"HCD"	"MS2"	"13.79988"	"14.3"	"100.000"	"83.6244"	"28928"	"28928"	"28911"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.1"	""	"22.2"	""	"19.8"	""	"21.3"	""	"24.3"	"26.0"	""	"763"	"22"	"35.000"	"28.000"	"0.259713510341662"	"15"	"0.002973"	"0.02971"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"668.85223"	"1336.69719"	"1336.69798"	"-0.59"	"-0.00040"	"8/76"	"8"	"76"	"2181786.7555542"	"HCD"	"MS2"	"0"	"73.5"	"100.000"	"72.9701"	"24653"	"24653"	"24637"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.7"	""	"73.2"	""	"80.8"	""	"199.2"	""	"129.8"	"133.2"	""	"763"	"38"	"35.000"	"28.000"	"0.0061729753436083"	"25"	"0.0001301"	"0.003974"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"668.85229"	"1336.69731"	"1336.69798"	"-0.50"	"-0.00033"	"7/76"	"7"	"76"	"293872.09979248"	"HCD"	"MS2"	"7.483029"	"11.9"	"100.000"	"83.0592"	"28707"	"28707"	"28695"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.1"	""	"17.7"	""	"13.6"	""	"15.1"	""	"24.6"	"23.1"	""	"763"	"25"	"35.000"	"28.000"	"0.131067357123802"	"23"	"0.00387"	"0.03916"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"668.85229"	"1336.69731"	"1336.69798"	"-0.50"	"-0.00033"	"5/76"	"5"	"76"	"341332.053771973"	"HCD"	"MS2"	"32.96484"	"15.4"	"100.000"	"81.9362"	"28260"	"28260"	"28243"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.6"	""	"18.5"	""	"22.8"	""	"23.1"	""	"27.5"	"31.1"	""	"763"	"18"	"35.000"	"28.000"	"0.65538204970062"	"14"	"0.00447"	"0.04689"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.85229"	"1336.69731"	"1336.69798"	"-0.50"	"-0.00033"	"4/76"	"4"	"76"	"421338.101013184"	"HCD"	"MS2"	"61.78756"	"19.2"	"100.000"	"84.0449"	"29093"	"29093"	"29072"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.8"	""	"19.5"	""	"27.5"	""	"40.7"	""	"33.1"	"36.5"	""	"763"	"17"	"35.000"	"28.000"	"0.770006767744515"	"14"	"0.004867"	"0.0518"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"668.85236"	"1336.69744"	"1336.69798"	"-0.41"	"-0.00027"	"5/76"	"5"	"76"	"316872.533996582"	"HCD"	"MS2"	"22.80949"	"14.5"	"100.000"	"82.7748"	"28596"	"28596"	"28581"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.7"	""	"23.6"	""	"24.2"	""	"19.8"	""	"25.2"	"23.4"	""	"763"	"31"	"35.000"	"28.000"	"0.0273208710996222"	"23"	"0.001465"	"0.01814"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"668.85236"	"1336.69744"	"1336.69798"	"-0.41"	"-0.00027"	"7/76"	"7"	"76"	"433942.399353027"	"HCD"	"MS2"	"37.75945"	"19.3"	"100.000"	"79.1864"	"27156"	"27156"	"27140"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.0"	""	"21.8"	""	"28.0"	""	"25.0"	""	"37.9"	"33.4"	""	"763"	"12"	"35.000"	"28.000"	"2.39053189372496"	"16"	"0.008478"	"0.1024"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"668.85242"	"1336.69756"	"1336.69798"	"-0.32"	"-0.00021"	"4/76"	"4"	"76"	"266165.580993652"	"HCD"	"MS2"	"35.03187"	"11.6"	"100.000"	"85.5066"	"29669"	"29669"	"29657"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.7"	""	"17.2"	""	"18.7"	""	"12.1"	""	"21.3"	"21.2"	""	"764"	"18"	"35.000"	"28.000"	"0.567627415353637"	"17"	"0.002973"	"0.02853"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"668.85242"	"1336.69756"	"1336.69798"	"-0.32"	"-0.00021"	"7/76"	"7"	"76"	"349089.963745117"	"HCD"	"MS2"	"15.09598"	"16.5"	"100.000"	"79.9587"	"27463"	"27463"	"27441"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.3"	""	"29.1"	""	"19.5"	""	"21.0"	"1.1"	"29.5"	"36.2"	""	"764"	"25"	"35.000"	"28.000"	"0.109159958756923"	"18"	"0.005617"	"0.06309"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"668.85242"	"1336.69756"	"1336.69798"	"-0.32"	"-0.00021"	"6/76"	"6"	"76"	"324224.085083008"	"HCD"	"MS2"	"25.42974"	"15.4"	"100.000"	"82.8913"	"28643"	"28643"	"28631"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.7"	""	"23.1"	""	"19.3"	""	"23.1"	""	"32.4"	"27.5"	""	"764"	"23"	"35.000"	"28.000"	"0.208960097825497"	"15"	"0.003967"	"0.04181"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"668.85248"	"1336.69768"	"1336.69798"	"-0.23"	"-0.00015"	"6/76"	"6"	"76"	"343903.529174805"	"HCD"	"MS2"	"25.07981"	"16.6"	"100.000"	"80.9892"	"27881"	"27881"	"27865"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.8"	""	"19.5"	""	"25.9"	""	"23.4"	""	"37.6"	"26.2"	""	"764"	"20"	"35.000"	"28.000"	"0.420788016244821"	"19"	"0.003922"	"0.04009"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"668.85248"	"1336.69768"	"1336.69798"	"-0.23"	"-0.00015"	"7/76"	"7"	"76"	"226419.174804688"	"HCD"	"MS2"	"7.205581"	"10.1"	"100.000"	"85.1231"	"29523"	"29523"	"29502"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.9"	""	"13.0"	""	"15.6"	""	"14.9"	""	"18.8"	"16.9"	""	"764"	"23"	"35.000"	"28.000"	"0.175010200724952"	"15"	"0.003507"	"0.0361"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"668.85248"	"1336.69768"	"1336.69798"	"-0.23"	"-0.00015"	"7/76"	"7"	"76"	"2444496.11706543"	"HCD"	"MS2"	"0"	"71.9"	"100.000"	"73.0869"	"24687"	"24687"	"24670"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.5"	""	"74.5"	""	"77.3"	""	"202.3"	""	"120.0"	"133.5"	""	"764"	"46"	"35.000"	"28.000"	"0.00102816629510008"	"19"	"0"	"0.002337"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"668.85248"	"1336.69768"	"1336.69798"	"-0.23"	"-0.00015"	"13/76"	"13"	"76"	"3707796.45532227"	"HCD"	"MS2"	"0.7177507"	"115.9"	"100.000"	"72.7825"	"24563"	"24563"	"24546"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"130.2"	""	"102.5"	""	"111.0"	""	"348.6"	""	"207.2"	"199.2"	""	"764"	"38"	"35.000"	"28.000"	"0.00677740381700044"	"18"	"0"	"0.003096"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"668.85248"	"1336.69768"	"1336.69798"	"-0.23"	"-0.00015"	"10/76"	"10"	"76"	"3800147.08068848"	"HCD"	"MS2"	"1.163998"	"116.2"	"100.000"	"72.6726"	"24531"	"24531"	"24513"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"115.6"	""	"110.0"	""	"121.4"	""	"354.3"	"0.3"	"197.7"	"202.1"	""	"764"	"35"	"35.000"	"28.000"	"0.011562809295347"	"17"	"0"	"0.001831"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"668.85254"	"1336.69780"	"1336.69798"	"-0.14"	"-0.00009"	"7/76"	"7"	"76"	"298109.522338867"	"HCD"	"MS2"	"24.934"	"13.1"	"100.000"	"82.2063"	"28368"	"28368"	"28358"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.5"	""	"14.9"	""	"16.9"	""	"17.8"	"1.1"	"24.0"	"28.3"	""	"778"	"22"	"35.000"	"28.000"	"0.219255048116296"	"18"	"0.00447"	"0.04669"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"3"	"668.85260"	"1336.69792"	"1336.69798"	"-0.04"	"-0.00003"	"5/76"	"5"	"76"	"195144.166625977"	"HCD"	"MS2"	"20.9621"	"7.6"	"100.000"	"87.3754"	"30399"	"30399"	"30384"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.3"	""	"12.5"	""	"9.8"	""	"9.0"	""	"15.3"	"13.8"	""	"766"	"10"	"35.000"	"28.000"	"4.04761106028831"	"16"	"0.005427"	"0.06182"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"668.85260"	"1336.69792"	"1336.69798"	"-0.04"	"-0.00003"	"7/76"	"7"	"76"	"262396.897094727"	"HCD"	"MS2"	"27.43746"	"10.6"	"100.000"	"85.2272"	"29564"	"29564"	"29547"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.3"	""	"13.5"	""	"18.2"	""	"13.6"	""	"18.0"	"23.9"	""	"766"	"28"	"35.000"	"28.000"	"0.0602835437090562"	"24"	"0.002056"	"0.02231"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"668.85260"	"1336.69792"	"1336.69798"	"-0.04"	"-0.00003"	"6/76"	"6"	"76"	"364309.616210938"	"HCD"	"MS2"	"15.39892"	"17.3"	"100.000"	"81.5955"	"28124"	"28124"	"28102"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.5"	""	"20.3"	""	"27.8"	""	"21.7"	""	"34.3"	"37.5"	""	"766"	"11"	"35.000"	"28.000"	"3.08459942979243"	"16"	"0.007627"	"0.09088"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.85266"	"1336.69805"	"1336.69798"	"0.05"	"0.00003"	"5/76"	"5"	"76"	"196867.915710449"	"HCD"	"MS2"	"16.58644"	"9.5"	"100.000"	"87.0975"	"30291"	"30291"	"30281"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.8"	""	"9.2"	""	"14.2"	""	"16.1"	""	"16.8"	"21.6"	""	"766"	"31"	"35.000"	"28.000"	"0.0273652092886922"	"14"	"0.001465"	"0.01835"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"668.85272"	"1336.69817"	"1336.69798"	"0.14"	"0.00009"	"6/76"	"6"	"76"	"363152.333312988"	"HCD"	"MS2"	"51.47879"	"17.0"	"100.000"	"82.0039"	"28291"	"28291"	"28270"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.5"	""	"27.5"	""	"26.0"	""	"21.4"	""	"23.2"	"40.9"	""	"766"	"22"	"35.000"	"28.000"	"0.254213595963931"	"18"	"0.001886"	"0.02104"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"668.85278"	"1336.69829"	"1336.69798"	"0.23"	"0.00015"	"5/76"	"5"	"76"	"294228.190490723"	"HCD"	"MS2"	"17.89071"	"14.2"	"100.000"	"82.6069"	"28531"	"28531"	"28514"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.7"	""	"25.1"	""	"14.7"	""	"20.7"	""	"23.0"	"29.5"	""	"766"	"15"	"35.000"	"28.000"	"1.16734378102752"	"15"	"0.003449"	"0.03358"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"668.85278"	"1336.69829"	"1336.69798"	"0.23"	"0.00015"	"6/76"	"6"	"76"	"341503.209106445"	"HCD"	"MS2"	"32.42788"	"16.7"	"100.000"	"81.7044"	"28170"	"28170"	"28153"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.0"	""	"23.1"	""	"26.6"	""	"23.9"	"1.3"	"27.1"	"29.9"	""	"766"	"20"	"35.000"	"28.000"	"0.375144664411532"	"21"	"0.002547"	"0.02511"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.85291"	"1336.69853"	"1336.69798"	"0.41"	"0.00028"	"5/76"	"5"	"76"	"244635.613220215"	"HCD"	"MS2"	"0"	"12.7"	"100.000"	"76.9963"	"26277"	"26277"	"26253"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.0"	""	"20.4"	""	"18.3"	""	"17.6"	""	"22.2"	"26.1"	""	"759"	"33"	"35.000"	"28.000"	"0.0191960459230182"	"15"	"0.00263"	"0.02558"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"668.85291"	"1336.69853"	"1336.69798"	"0.41"	"0.00028"	"6/76"	"6"	"76"	"260338.091369629"	"HCD"	"MS2"	"10.06842"	"11.8"	"100.000"	"83.4687"	"28864"	"28864"	"28853"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.4"	""	"19.7"	""	"14.9"	""	"13.4"	""	"19.9"	"21.0"	""	"759"	"29"	"35.000"	"28.000"	"0.0502587612606375"	"23"	"0.0023"	"0.02377"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"668.85309"	"1336.69890"	"1336.69798"	"0.69"	"0.00046"	"6/76"	"6"	"76"	"328491.46673584"	"HCD"	"MS2"	"46.50629"	"15.5"	"100.000"	"88.5259"	"30850"	"30850"	"30829"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.1"	""	"21.6"	""	"17.8"	""	"27.0"	""	"25.6"	"33.6"	""	"759"	"7"	"35.000"	"28.000"	"6.92168419030302"	"15"	"0.008437"	"0.1018"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"668.85315"	"1336.69902"	"1336.69798"	"0.78"	"0.00052"	"6/76"	"6"	"76"	"200683.935180664"	"HCD"	"MS2"	"25.28868"	"8.6"	"100.000"	"87.2106"	"30341"	"30341"	"30336"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.1"	""	"15.5"	""	"12.8"	""	"10.7"	""	"15.1"	"15.4"	""	"759"	"27"	"35.000"	"28.000"	"0.0748534428355587"	"22"	"0.001886"	"0.02155"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"668.85315"	"1336.69902"	"1336.69798"	"0.78"	"0.00052"	"7/76"	"7"	"76"	"256437.955932617"	"HCD"	"MS2"	"45.97936"	"12.7"	"100.000"	"84.7992"	"29394"	"29394"	"29375"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.7"	""	"17.4"	""	"15.8"	""	"16.6"	""	"27.9"	"25.8"	""	"759"	"21"	"35.000"	"28.000"	"0.312760414647434"	"15"	"0.002379"	"0.02466"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"668.85333"	"1336.69939"	"1336.69798"	"1.05"	"0.00070"	"6/76"	"6"	"76"	"302935.076416016"	"HCD"	"MS2"	"15.58889"	"15.1"	"100.000"	"79.6309"	"27331"	"27331"	"27312"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.5"	""	"20.9"	""	"17.6"	""	"27.3"	""	"28.2"	"30.4"	""	"765"	"26"	"35.000"	"28.000"	"0.0938926160249524"	"17"	"0.001635"	"0.01991"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.85345"	"1336.69963"	"1336.69798"	"1.23"	"0.00082"	"7/76"	"7"	"76"	"296965.432495117"	"HCD"	"MS2"	"13.14418"	"12.9"	"100.000"	"79.8297"	"27415"	"27415"	"27398"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.3"	""	"16.9"	""	"20.0"	""	"13.0"	""	"24.8"	"28.9"	""	"740"	"27"	"35.000"	"28.000"	"0.0674841409858266"	"14"	"0.002379"	"0.02481"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.85364"	"1336.70000"	"1336.69798"	"1.51"	"0.00101"	"6/76"	"6"	"76"	"203581.286804199"	"HCD"	"MS2"	"18.93426"	"11.0"	"100.000"	"86.9463"	"30237"	"30237"	"30218"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.6"	""	"12.3"	""	"14.6"	""	"19.2"	""	"17.9"	"25.4"	""	"740"	"22"	"35.000"	"28.000"	"0.229193197778409"	"14"	"0.00413"	"0.04516"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAQLFATDER"	"[R].gAQLFATDER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVS2"	"Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Rattus norvegicus OX=10116 GN=Osgep PE=2 SV=2"	"Q9WVS2"	"Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Rattus norvegicus OX=10116 GN=Osgep PE=2 SV=2"	"0"	"2"	"2"	"0.5227"	"0.0000"	"1"	"1"	"1"	"668.85675"	"1336.70622"	"1336.70585"	"0.28"	"0.00019"	"6/90"	"6"	"90"	"1938515.31060791"	"HCD"	"MS2"	"37.23769"	"114.0"	"100.000"	"53.7843"	"16870"	"16870"	"16848"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"165.1"	""	"143.3"	""	"148.5"	""	"219.1"	""	"214.8"	"189.5"	""	"755"	"44"	"35.000"	"28.000"	"0.00162898451502481"	""	"0"	"0.0001163"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAQLFATDER"	"[R].gAQLFATDER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVS2"	"Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Rattus norvegicus OX=10116 GN=Osgep PE=2 SV=2"	"Q9WVS2"	"Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Rattus norvegicus OX=10116 GN=Osgep PE=2 SV=2"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"668.85681"	"1336.70635"	"1336.70585"	"0.38"	"0.00025"	"6/90"	"6"	"90"	"1855748.64929199"	"HCD"	"MS2"	"44.16826"	"103.9"	"100.000"	"53.5144"	"16771"	"16771"	"16748"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"143.7"	""	"134.5"	""	"146.6"	""	"198.4"	""	"188.2"	"179.4"	""	"755"	"40"	"35.000"	"28.000"	"0.00390766167921452"	"26"	"0"	"5.838E-05"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"ELIFEETAR"	"[K].eLIFEETAR.[F]"	"N-Term(TMT6plex)"	"0"	"1"	""	""	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"668.86792"	"1336.72856"	"1336.73100"	"-1.82"	"-0.00122"	"13/76"	"13"	"76"	"648352.922485352"	"HCD"	"MS2"	"22.50615"	"34.5"	"100.000"	"74.2548"	"25174"	"25174"	"25153"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.2"	""	"42.6"	""	"50.4"	""	"48.9"	""	"71.6"	"73.2"	""	"844"	"38"	"36.000"	"29.000"	"0.00697127878852644"	"23"	"0"	"0.0003989"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ELIFQETAR"	"[K].eLIFqETAR.[F]"	"N-Term(TMT6plex); Q5(Deamidated)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"668.86792"	"1336.72856"	"1336.73100"	"-1.82"	"-0.00122"	"13/84"	"13"	"84"	"648352.922485352"	"HCD"	"MS2"	"22.50615"	"34.5"	"100.000"	"74.2548"	"25174"	"25174"	"25153"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.2"	""	"42.6"	""	"50.4"	""	"48.9"	""	"71.6"	"73.2"	""	"844"	"38"	"36.000"	"29.000"	"0.00697127878852644"	"23"	"0"	"0.0003989"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"ELIFEETAR"	"[K].eLIFEETAR.[F]"	"N-Term(TMT6plex)"	"0"	"1"	""	""	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"668.86865"	"1336.73003"	"1336.73100"	"-0.72"	"-0.00048"	"7/76"	"7"	"76"	"1586277.34051514"	"HCD"	"MS2"	"0"	"86.7"	"100.000"	"74.7494"	"25361"	"25361"	"25347"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"112.6"	""	"115.5"	""	"117.5"	""	"150.0"	""	"158.7"	"169.3"	""	"849"	"46"	"36.000"	"29.000"	"0.0011478303255642"	"25"	"0"	"0.0004031"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ELIFQETAR"	"[K].eLIFqETAR.[F]"	"N-Term(TMT6plex); Q5(Deamidated)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"668.86865"	"1336.73003"	"1336.73100"	"-0.73"	"-0.00048"	"7/84"	"7"	"84"	"1586277.34051514"	"HCD"	"MS2"	"0"	"86.7"	"100.000"	"74.7494"	"25361"	"25361"	"25347"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"112.6"	""	"115.5"	""	"117.5"	""	"150.0"	""	"158.7"	"169.3"	""	"849"	"46"	"36.000"	"29.000"	"0.0011478303255642"	"25"	"0"	"0.0004031"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"ELIFEETAR"	"[K].eLIFEETAR.[F]"	"N-Term(TMT6plex)"	"0"	"1"	""	""	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"668.86884"	"1336.73039"	"1336.73100"	"-0.45"	"-0.00030"	"5/76"	"5"	"76"	"1251390.5435791"	"HCD"	"MS2"	"9.05339"	"68.3"	"100.000"	"74.6582"	"25337"	"25337"	"25322"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.7"	""	"70.5"	""	"104.8"	""	"120.1"	"0.3"	"129.2"	"132.1"	""	"856"	"32"	"36.000"	"29.000"	"0.0275070343011685"	"22"	"0"	"0.0007866"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ELIFQETAR"	"[K].eLIFqETAR.[F]"	"N-Term(TMT6plex); Q5(Deamidated)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"668.86884"	"1336.73039"	"1336.73100"	"-0.45"	"-0.00030"	"5/84"	"5"	"84"	"1251390.5435791"	"HCD"	"MS2"	"9.05339"	"68.3"	"100.000"	"74.6582"	"25337"	"25337"	"25322"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.7"	""	"70.5"	""	"104.8"	""	"120.1"	"0.3"	"129.2"	"132.1"	""	"856"	"32"	"36.000"	"29.000"	"0.0275070343011685"	"22"	"0"	"0.0007866"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"ELIFEETAR"	"[K].eLIFEETAR.[F]"	"N-Term(TMT6plex)"	"0"	"1"	""	""	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"668.86896"	"1336.73064"	"1336.73100"	"-0.27"	"-0.00018"	"14/76"	"14"	"76"	"683075.422790527"	"HCD"	"MS2"	"18.61897"	"36.3"	"100.000"	"74.4082"	"25223"	"25223"	"25201"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.3"	""	"46.2"	""	"58.0"	""	"57.6"	"0.1"	"62.8"	"67.5"	""	"856"	"41"	"36.000"	"29.000"	"0.0036765778720431"	""	"0"	"0.0003823"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ELIFQETAR"	"[K].eLIFqETAR.[F]"	"N-Term(TMT6plex); Q5(Deamidated)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"668.86896"	"1336.73064"	"1336.73100"	"-0.27"	"-0.00018"	"14/84"	"14"	"84"	"683075.422790527"	"HCD"	"MS2"	"18.61897"	"36.3"	"100.000"	"74.4082"	"25223"	"25223"	"25201"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.3"	""	"46.2"	""	"58.0"	""	"57.6"	"0.1"	"62.8"	"67.5"	""	"856"	"41"	"36.000"	"29.000"	"0.0036765778720431"	""	"0"	"0.0003824"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENPVYEK"	"[R].eNPVYEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"668.87854"	"1336.74980"	"1336.75129"	"-1.11"	"-0.00074"	"6/68"	"6"	"68"	"4419544.07397461"	"HCD"	"MS2"	"0"	"317.9"	"100.000"	"43.7335"	"12789"	"12789"	"12776"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"528.6"	""	"366.9"	""	"378.1"	""	"511.0"	"0.1"	"619.6"	"609.6"	""	"854"	"32"	"36.000"	"29.000"	"0.0294054530539006"	""	"0.005427"	"0.06168"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENPVYEK"	"[R].eNPVYEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"668.87860"	"1336.74993"	"1336.75129"	"-1.02"	"-0.00068"	"6/68"	"6"	"68"	"2832756.85375977"	"HCD"	"MS2"	"4.403689"	"225.7"	"100.000"	"44.0505"	"12918"	"12918"	"12897"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"377.5"	""	"261.3"	""	"292.1"	""	"345.9"	"5.3"	"403.6"	"452.0"	""	"850"	"30"	"36.000"	"29.000"	"0.045434832366963"	"27"	"0.005309"	"0.05986"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENPVYEK"	"[R].eNPVYEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"0"	"2"	"2"	"0.5152"	"0.0000"	"1"	"1"	"1"	"668.87891"	"1336.75054"	"1336.75129"	"-0.56"	"-0.00038"	"6/68"	"6"	"68"	"5486183.95617676"	"HCD"	"MS2"	"0"	"379.0"	"100.000"	"43.8856"	"12840"	"12840"	"12824"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"606.5"	""	"453.3"	""	"455.2"	""	"602.3"	""	"732.2"	"747.1"	""	"863"	"33"	"36.000"	"29.000"	"0.0193633635756147"	""	"0.005001"	"0.05618"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGVSPDK"	"[R].eFGVSPDk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"668.87903"	"1336.75078"	"1336.75129"	"-0.38"	"-0.00025"	"7/68"	"7"	"68"	"685329.565368652"	"HCD"	"MS2"	"14.41495"	"55.9"	"100.000"	"56.8402"	"18125"	"18125"	"18099"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"86.8"	""	"74.5"	""	"63.3"	""	"98.6"	"1.9"	"96.7"	"107.4"	""	"863"	"32"	"36.000"	"29.000"	"0.0273514780407364"	"24"	"0.002795"	"0.02659"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENPVYEK"	"[R].eNPVYEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"668.87933"	"1336.75139"	"1336.75129"	"0.08"	"0.00005"	"6/68"	"6"	"68"	"2752115.85180664"	"HCD"	"MS2"	"0"	"229.3"	"100.000"	"44.1776"	"12959"	"12959"	"12939"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"389.1"	""	"267.8"	""	"303.9"	""	"353.7"	"5.4"	"422.6"	"429.7"	""	"849"	"31"	"36.000"	"29.000"	"0.0341883148289003"	"27"	"0.005874"	"0.066"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGVSPDK"	"[R].eFGVSPDk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"668.87994"	"1336.75261"	"1336.75129"	"0.99"	"0.00066"	"7/68"	"7"	"68"	"673935.73260498"	"HCD"	"MS2"	"7.113904"	"55.9"	"100.000"	"57.0196"	"18184"	"18184"	"18163"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.2"	""	"60.5"	"2.1"	"70.3"	""	"87.1"	""	"117.9"	"117.1"	""	"918"	"44"	"36.000"	"29.000"	"0.00205027768797292"	"25"	"0.0008629"	"0.01032"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTMEELK"	"[K].qTMEELk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JJ50"	"Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Rattus norvegicus OX=10116 GN=Hgs PE=1 SV=1"	"Q9JJ50"	"Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Rattus norvegicus OX=10116 GN=Hgs PE=1 SV=1"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"668.88165"	"1336.75603"	"1336.75466"	"1.03"	"0.00069"	"6/66"	"6"	"66"	"475442.276550293"	"HCD"	"MS2"	"12.93339"	"43.9"	"100.000"	"51.0427"	"15762"	"15762"	"15739"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.4"	""	"55.9"	""	"50.8"	""	"76.4"	""	"90.8"	"91.4"	""	"911"	"30"	"36.000"	"29.000"	"0.0421200018228861"	"28"	"0.003507"	"0.03609"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAQDYGVLK"	"[R].TIAQDYGVLk.[A]"	"K10(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9054"	"0.0000"	"1"	"1"	"1"	"668.88715"	"1336.76702"	"1336.76738"	"-0.27"	"-0.00018"	"8/92"	"8"	"92"	"391440.377075195"	"HCD"	"MS2"	"20.50374"	"20.9"	"100.000"	"65.2608"	"21496"	"21496"	"21470"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.4"	""	"33.7"	""	"31.6"	""	"24.7"	""	"38.0"	"36.5"	""	"842"	"74"	"36.000"	"29.000"	"1.84196806271624E-06"	"24"	"0"	"0.0006557"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAQDYGVLK"	"[R].TIAQDYGVLk.[A]"	"K10(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"668.88733"	"1336.76738"	"1336.76738"	"0.00"	"0.00000"	"8/92"	"8"	"92"	"406771.350219727"	"HCD"	"MS2"	"8.864258"	"18.8"	"100.000"	"65.4413"	"21585"	"21585"	"21563"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.7"	""	"29.0"	""	"29.3"	""	"26.2"	""	"33.6"	"33.5"	""	"836"	"69"	"36.000"	"29.000"	"5.44723713393061E-06"	"23"	"0"	"0.001112"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAQDYGVLK"	"[R].TIAQDYGVLk.[A]"	"K10(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"668.88751"	"1336.76775"	"1336.76738"	"0.27"	"0.00018"	"8/92"	"8"	"92"	"372427.382019043"	"HCD"	"MS2"	"19.91108"	"19.3"	"100.000"	"65.5585"	"21617"	"21617"	"21597"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.2"	""	"27.3"	""	"27.0"	""	"32.0"	""	"38.5"	"35.2"	""	"834"	"64"	"36.000"	"29.000"	"1.77474538276771E-05"	"18"	"0"	"0.002937"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAQDYGVLK"	"[R].TIAQDYGVLk.[A]"	"K10(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"668.88763"	"1336.76799"	"1336.76738"	"0.46"	"0.00030"	"7/92"	"7"	"92"	"343928.661743164"	"HCD"	"MS2"	"37.75268"	"19.1"	"100.000"	"65.1106"	"21451"	"21451"	"21421"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.1"	""	"31.0"	""	"24.5"	""	"28.8"	""	"33.6"	"36.5"	""	"840"	"52"	"36.000"	"29.000"	"0.00027242646209026"	"18"	"0.0001301"	"0.004675"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVTESSK"	"[K].dIVTESSk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"668.88940"	"1336.77153"	"1336.77242"	"-0.66"	"-0.00044"	"7/68"	"7"	"68"	"581813.904846191"	"HCD"	"MS2"	"12.25869"	"52.9"	"100.000"	"45.0681"	"13317"	"13317"	"13293"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.8"	""	"65.3"	""	"68.1"	""	"92.0"	""	"100.4"	"115.8"	""	"796"	"32"	"35.000"	"29.000"	"0.0260545197278775"	"23"	"0.0003538"	"0.006464"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVTESSK"	"[K].dIVTESSk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"668.89001"	"1336.77275"	"1336.77242"	"0.25"	"0.00017"	"14/68"	"14"	"68"	"1061543.38562012"	"HCD"	"MS2"	"20.53541"	"91.0"	"100.000"	"44.7064"	"13181"	"13181"	"13157"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"127.2"	""	"104.8"	""	"127.2"	""	"155.1"	""	"172.8"	"182.3"	""	"801"	"38"	"36.000"	"29.000"	"0.00624600777382194"	"28"	"0"	"0.001826"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVTESSK"	"[K].dIVTESSk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"0"	"2"	"2"	"0.6757"	"0.0000"	"1"	"1"	"1"	"668.89008"	"1336.77287"	"1336.77242"	"0.34"	"0.00023"	"14/68"	"14"	"68"	"1173656.91595459"	"HCD"	"MS2"	"0"	"95.3"	"100.000"	"44.8771"	"13239"	"13239"	"13216"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"126.1"	""	"111.8"	""	"126.8"	""	"170.9"	""	"192.6"	"175.6"	""	"801"	"37"	"36.000"	"29.000"	"0.00854284487715203"	"27"	"0"	"0.002733"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESGSDAWK"	"[R].eSGSDAWk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"0.5588"	"0.0000"	"1"	"1"	"1"	"669.35834"	"1337.70940"	"1337.71015"	"-0.56"	"-0.00038"	"12/64"	"12"	"64"	"3091035.46405029"	"HCD"	"MS2"	"26.89759"	"279.7"	"100.000"	"44.1217"	"12947"	"12947"	"12929"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"499.1"	""	"365.9"	""	"366.7"	""	"423.5"	""	"485.9"	"508.4"	""	"695"	"34"	"35.000"	"28.000"	"0.0148236382783553"	""	"0.0006732"	"0.008932"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESGSDAWK"	"[R].eSGSDAWk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"0.5588"	"0.0000"	"1"	"1"	"1"	"669.35840"	"1337.70952"	"1337.71015"	"-0.47"	"-0.00032"	"12/64"	"12"	"64"	"2900534.17565918"	"HCD"	"MS2"	"19.90656"	"262.1"	"100.000"	"44.2567"	"12988"	"12988"	"12971"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"483.8"	""	"319.8"	""	"347.1"	""	"411.5"	""	"454.6"	"462.7"	""	"695"	"34"	"35.000"	"28.000"	"0.0148578102937676"	""	"0.0005778"	"0.008091"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDEMNGK"	"[K].aVDEmNGk.[E]"	"N-Term(TMT6plex); M5(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"669.35974"	"1337.71221"	"1337.71352"	"-0.98"	"-0.00066"	"7/62"	"7"	"62"	"261763.415100098"	"HCD"	"MS2"	"0"	"21.2"	"100.000"	"28.2673"	"6514"	"6514"	"6491"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.3"	""	"21.2"	""	"25.2"	""	"39.9"	""	"36.9"	"50.3"	""	"729"	"22"	"35.000"	"28.000"	"0.217118851316324"	"14"	"0.008478"	"0.1039"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMQPTHPIR"	"[K].eMQPTHPIR.[L]"	"N-Term(TMT6plex)"	"2"	"3"	"P68255; P63102"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P35213; P68255; P63102"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"669.36353"	"1337.71977"	"1337.71972"	"0.04"	"0.00003"	"8/84"	"8"	"84"	"5005029.9017334"	"HCD"	"MS2"	"0"	"227.3"	"100.000"	"25.7319"	"5486"	"5486"	"5465"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"374.4"	""	"286.3"	""	"339.2"	""	"319.2"	"1.4"	"420.2"	"411.3"	""	"761"	"28"	"35.000"	"28.000"	"0.0569317667143931"	"24"	"0"	"0.002787"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMQPTHPIR"	"[K].eMQPTHPIR.[L]"	"N-Term(TMT6plex)"	"2"	"3"	"P68255; P63102"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P35213; P68255; P63102"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"669.36359"	"1337.71990"	"1337.71972"	"0.13"	"0.00009"	"8/84"	"8"	"84"	"4216972.37768555"	"HCD"	"MS2"	"0"	"199.3"	"100.000"	"25.8401"	"5515"	"5515"	"5497"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"317.9"	""	"260.5"	""	"276.2"	""	"285.1"	""	"376.5"	"372.6"	""	"764"	"28"	"35.000"	"28.000"	"0.0616684968707718"	"25"	"0"	"0.002675"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMQPTHPIR"	"[K].eMQPTHPIR.[L]"	"N-Term(TMT6plex)"	"2"	"3"	"P68255; P63102"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P35213; P68255; P63102"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"3"	"3"	"0.6889"	"0.0000"	"1"	"1"	"1"	"446.57828"	"1337.72028"	"1337.71972"	"0.42"	"0.00019"	"8/84"	"8"	"84"	"181357375.728516"	"HCD"	"MS2"	"13.28405"	"161.1"	"6.056"	"25.7622"	"5484"	"5484"	"5467"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"241.2"	""	"217.0"	""	"236.1"	""	"209.4"	""	"312.6"	"311.7"	""	"734"	"45"	"35.000"	"28.000"	"0.00113675288281248"	""	"0"	"0.0009099"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMQPTHPIR"	"[K].eMQPTHPIR.[L]"	"N-Term(TMT6plex)"	"2"	"3"	"P68255; P63102"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P35213; P68255; P63102"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"3"	"3"	"0.6739"	"0.0000"	"1"	"1"	"1"	"446.57886"	"1337.72202"	"1337.71972"	"1.72"	"0.00077"	"8/84"	"8"	"84"	"194972273.272461"	"HCD"	"MS2"	"12.19098"	"184.1"	"6.341"	"25.6816"	"5466"	"5466"	"5450"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"277.0"	""	"262.7"	""	"241.9"	""	"239.8"	""	"354.5"	"371.3"	""	"743"	"46"	"35.000"	"28.000"	"0.00089527986675707"	""	"0"	"0.0007722"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGDETGAK"	"[K].tTGDETGAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"669.36920"	"1337.73113"	"1337.73128"	"-0.12"	"-0.00008"	"8/74"	"8"	"74"	"3312625.47167969"	"HCD"	"MS2"	"0"	"264.3"	"100.000"	"25.4357"	"5366"	"5366"	"5344"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"432.8"	""	"333.1"	""	"359.2"	""	"473.9"	""	"493.0"	"410.6"	""	"839"	"39"	"36.000"	"29.000"	"0.00499726022367484"	"27"	"0"	"0.001292"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGDETGAK"	"[K].tTGDETGAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"669.37036"	"1337.73345"	"1337.73128"	"1.62"	"0.00108"	"12/74"	"12"	"74"	"3996480.59429932"	"HCD"	"MS2"	"0"	"317.0"	"100.000"	"25.5301"	"5390"	"5390"	"5365"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"503.9"	""	"378.6"	""	"453.6"	""	"613.6"	""	"568.5"	"485.2"	""	"788"	"38"	"35.000"	"28.000"	"0.00634594380260239"	"27"	"0"	"0.001683"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHPEAQAK"	"[R].vHPEAQAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"669.39893"	"1337.79057"	"1337.79416"	"-2.68"	"-0.00179"	"7/60"	"7"	"60"	"262851.026306152"	"HCD"	"MS2"	"0"	"21.3"	"100.000"	"24.0330"	"4810"	"4810"	"4783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.0"	""	"21.6"	""	"24.9"	""	"36.1"	"1.1"	"51.6"	"39.4"	""	"578"	"30"	"34.000"	"27.000"	"0.0283725155532775"	"16"	"0.004431"	"0.04654"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STTFAQAEVR"	"[K].sTTFAQAEVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"669.86365"	"1338.72002"	"1338.72150"	"-1.10"	"-0.00074"	"8/94"	"8"	"94"	"582366.052612305"	"HCD"	"MS2"	"0"	"46.3"	"100.000"	"42.8660"	"12427"	"12427"	"12402"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"70.9"	""	"40.0"	""	"42.3"	""	"87.6"	""	"119.2"	"83.5"	""	"830"	"43"	"36.000"	"29.000"	"0.00225968600929605"	"21"	"0"	"0.0007646"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STTFAQAEVR"	"[K].sTTFAQAEVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"669.86487"	"1338.72246"	"1338.72150"	"0.72"	"0.00048"	"7/94"	"7"	"94"	"468798.082580566"	"HCD"	"MS2"	"0"	"38.3"	"100.000"	"42.7370"	"12385"	"12385"	"12360"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.9"	""	"41.7"	""	"38.4"	""	"75.4"	""	"92.5"	"71.8"	""	"849"	"31"	"36.000"	"29.000"	"0.0302606111288708"	"15"	"0"	"0.002727"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGAGVGSMTK"	"[R].gGAGVGSmTk.[I]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"669.87549"	"1338.74370"	"1338.74516"	"-1.09"	"-0.00073"	"9/76"	"9"	"76"	"512773.79095459"	"HCD"	"MS2"	"0"	"39.6"	"100.000"	"26.8906"	"5957"	"5957"	"5926"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.1"	""	"61.9"	""	"57.4"	""	"76.0"	""	"74.7"	"62.2"	""	"899"	"11"	"36.000"	"29.000"	"3.63688606680683"	"13"	"0.002973"	"0.02855"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGAGVGSMTK"	"[R].gGAGVGSmTk.[I]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"669.87610"	"1338.74492"	"1338.74516"	"-0.18"	"-0.00012"	"5/76"	"5"	"76"	"424982.704711914"	"HCD"	"MS2"	"0"	"32.6"	"100.000"	"27.0447"	"6003"	"6003"	"5980"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.3"	""	"42.5"	""	"44.0"	""	"70.9"	""	"60.2"	"45.8"	""	"890"	"5"	"36.000"	"29.000"	"13.7835158815138"	"14"	"0.006308"	"0.07185"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLETVYLER"	"[R].sLETVYLER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"669.87628"	"1338.74529"	"1338.74665"	"-1.02"	"-0.00068"	"6/78"	"6"	"78"	"2545573.14447021"	"HCD"	"MS2"	"4.790637"	"120.6"	"100.000"	"71.2564"	"23941"	"23941"	"23923"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"195.0"	""	"190.2"	""	"182.8"	""	"169.4"	""	"208.1"	"195.4"	""	"885"	"44"	"36.000"	"29.000"	"0.00165925553493626"	"21"	"0"	"0.0004323"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLETVYLER"	"[R].sLETVYLER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"669.87659"	"1338.74590"	"1338.74665"	"-0.56"	"-0.00038"	"6/78"	"6"	"78"	"1844433.83770752"	"HCD"	"MS2"	"23.30522"	"86.4"	"100.000"	"70.9881"	"23845"	"23845"	"23825"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"133.6"	""	"128.8"	""	"133.8"	""	"122.6"	""	"157.3"	"147.0"	""	"883"	"47"	"36.000"	"29.000"	"0.000790552484556582"	"22"	"0"	"0.0004209"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLETVYLER"	"[R].sLETVYLER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"669.87689"	"1338.74651"	"1338.74665"	"-0.10"	"-0.00007"	"6/78"	"6"	"78"	"1432718.66064453"	"HCD"	"MS2"	"1.50933"	"67.3"	"100.000"	"71.2756"	"23963"	"23963"	"23951"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"108.1"	""	"97.5"	""	"102.5"	""	"87.1"	""	"119.7"	"126.9"	""	"894"	"48"	"36.000"	"29.000"	"0.000753889202348768"	"20"	"0"	"0.0002659"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLETVYLER"	"[R].sLETVYLER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"669.87708"	"1338.74687"	"1338.74665"	"0.17"	"0.00011"	"7/78"	"7"	"78"	"290672.921875"	"HCD"	"MS2"	"0"	"18.2"	"100.000"	"71.5445"	"24058"	"24058"	"24040"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.8"	""	"28.9"	""	"22.5"	""	"27.0"	""	"39.4"	"32.0"	""	"879"	"38"	"36.000"	"29.000"	"0.00711146176544127"	"20"	"0"	"0.002984"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSQEEIK"	"[R].fSQEEIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04466"	"Myosin regulatory light chain 2, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Mylpf PE=1 SV=2"	"P04466"	"Myosin regulatory light chain 2, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Mylpf PE=1 SV=2"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"669.88678"	"1338.76628"	"1338.76694"	"-0.49"	"-0.00033"	"6/62"	"6"	"62"	"459525.168457031"	"HCD"	"MS2"	"0"	"44.6"	"100.000"	"57.1027"	"18232"	"18232"	"18208"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.2"	""	"17.7"	""	"19.5"	""	"42.1"	""	"40.7"	"285.2"	""	"723"	"19"	"35.000"	"28.000"	"0.409362731309654"	"24"	"0.006769"	"0.07822"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSQEEIK"	"[R].fSQEEIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04466"	"Myosin regulatory light chain 2, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Mylpf PE=1 SV=2"	"P04466"	"Myosin regulatory light chain 2, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Mylpf PE=1 SV=2"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"669.88715"	"1338.76702"	"1338.76694"	"0.06"	"0.00004"	"6/62"	"6"	"62"	"387296.828125"	"HCD"	"MS2"	"19.4703"	"38.4"	"100.000"	"57.3143"	"18304"	"18304"	"18283"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.2"	""	"14.5"	""	"24.5"	""	"27.8"	""	"34.5"	"245.5"	""	"698"	"23"	"35.000"	"28.000"	"0.174914344535918"	"27"	"0.005874"	"0.06685"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMADGNEK"	"[K].tmADGNEk.[K]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"670.34924"	"1339.69121"	"1339.69279"	"-1.18"	"-0.00079"	"6/72"	"6"	"72"	"2414966.49627686"	"HCD"	"MS2"	"0"	"162.1"	"100.000"	"22.8441"	"4325"	"4325"	"4294"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"178.9"	""	"143.1"	""	"173.8"	""	"419.8"	""	"320.0"	"304.5"	""	"610"	"29"	"34.000"	"27.000"	"0.03550584389702"	"23"	"0.006769"	"0.07826"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STTPDITGYR"	"[R].sTTPDITGYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"670.35590"	"1339.70452"	"1339.70551"	"-0.74"	"-0.00050"	"7/84"	"7"	"84"	"1602405.40032959"	"HCD"	"MS2"	"26.57828"	"88.4"	"100.000"	"47.4734"	"14308"	"14308"	"14286"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"126.0"	""	"121.9"	""	"104.5"	""	"135.0"	""	"175.0"	"177.0"	""	"672"	"30"	"35.000"	"28.000"	"0.0358376296733366"	"20"	"0.0002479"	"0.005276"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STTPDITGYR"	"[R].sTTPDITGYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"670.35608"	"1339.70488"	"1339.70551"	"-0.47"	"-0.00031"	"7/84"	"7"	"84"	"1646852.91259766"	"HCD"	"MS2"	"11.55267"	"86.5"	"100.000"	"47.8179"	"14437"	"14437"	"14410"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"113.0"	""	"129.2"	""	"100.9"	""	"135.6"	"0.3"	"162.1"	"179.8"	""	"674"	"35"	"35.000"	"28.000"	"0.0116313440156184"	"18"	"0.0001301"	"0.003857"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STTPDITGYR"	"[R].sTTPDITGYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"670.35675"	"1339.70622"	"1339.70551"	"0.53"	"0.00036"	"7/84"	"7"	"84"	"581244.454284668"	"HCD"	"MS2"	"0"	"40.2"	"100.000"	"47.7724"	"14430"	"14430"	"14407"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.8"	""	"55.1"	""	"54.4"	""	"58.3"	"1.1"	"77.7"	"76.8"	""	"676"	"21"	"35.000"	"28.000"	"0.27791801568211"	"14"	"0.00912"	"0.1173"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDDIEK"	"[K].yVDDIEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"0.4194"	"0.0000"	"1"	"1"	"1"	"670.37854"	"1339.74980"	"1339.75095"	"-0.86"	"-0.00057"	"12/54"	"12"	"54"	"1664894.62030029"	"HCD"	"MS2"	"0"	"158.8"	"100.000"	"59.6310"	"19249"	"19249"	"19222"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"222.0"	""	"166.0"	""	"180.0"	""	"304.5"	"1.8"	"305.9"	"326.4"	""	"684"	"31"	"35.000"	"28.000"	"0.0265476513887012"	""	"0.003449"	"0.03376"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDDIEK"	"[K].yVDDIEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"670.37915"	"1339.75102"	"1339.75095"	"0.05"	"0.00004"	"12/54"	"12"	"54"	"2440370.89904785"	"HCD"	"MS2"	"3.687585"	"206.5"	"100.000"	"59.4222"	"19178"	"19178"	"19158"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"279.0"	""	"207.1"	""	"210.4"	""	"391.5"	""	"432.1"	"442.7"	""	"667"	"35"	"35.000"	"28.000"	"0.0110432229014444"	"27"	"0.002973"	"0.02992"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEQSYQK"	"[R].vEQSYQk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"670.38342"	"1339.75957"	"1339.76219"	"-1.95"	"-0.00131"	"12/60"	"12"	"60"	"407826.234741211"	"HCD"	"MS2"	"0"	"38.0"	"100.000"	"38.0300"	"10459"	"10459"	"10436"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.6"	""	"49.5"	""	"50.1"	""	"51.2"	""	"71.8"	"78.6"	""	"656"	"30"	"35.000"	"28.000"	"0.0293004198664521"	"20"	"0.001886"	"0.02128"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEQSYQK"	"[R].vEQSYQk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"670.38416"	"1339.76103"	"1339.76219"	"-0.86"	"-0.00058"	"12/60"	"12"	"60"	"466010.021240234"	"HCD"	"MS2"	"0"	"40.9"	"100.000"	"37.7628"	"10358"	"10358"	"10337"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.5"	""	"46.0"	""	"52.3"	""	"59.9"	""	"87.9"	"77.8"	""	"635"	"34"	"35.000"	"28.000"	"0.01221078907994"	"21"	"0.001374"	"0.01685"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDIAFAYQR"	"[R].qDIAFAYQR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"670.86115"	"1340.71501"	"1340.71602"	"-0.75"	"-0.00050"	"7/80"	"7"	"80"	"2860781.40374756"	"HCD"	"MS2"	"0"	"111.4"	"100.000"	"61.8043"	"20100"	"20100"	"20081"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"171.0"	""	"120.4"	""	"135.0"	""	"196.2"	""	"216.0"	"219.9"	""	"652"	"21"	"35.000"	"28.000"	"0.26928837156216"	"15"	"0"	"0.003704"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDIAFAYQR"	"[R].qDIAFAYQR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"670.86157"	"1340.71587"	"1340.71602"	"-0.11"	"-0.00007"	"7/80"	"7"	"80"	"1504312.73986816"	"HCD"	"MS2"	"0"	"62.9"	"100.000"	"61.7814"	"20106"	"20106"	"20092"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"104.6"	""	"71.4"	""	"65.7"	""	"106.9"	""	"117.4"	"135.2"	""	"667"	"11"	"35.000"	"28.000"	"2.85164748747042"	"15"	"0.003967"	"0.04178"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGLSHEEVD"	"[K].iLGLSHEEVD.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK4"	"Apoptosis facilitator Bcl-2-like protein 14 OS=Rattus norvegicus OX=10116 GN=Bcl2l14 PE=1 SV=1"	"Q6AYK4"	"Apoptosis facilitator Bcl-2-like protein 14 OS=Rattus norvegicus OX=10116 GN=Bcl2l14 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"670.86646"	"1340.72563"	"1340.72591"	"-0.21"	"-0.00014"	"7/84"	"7"	"84"	"214550.331481934"	"HCD"	"MS2"	"40.4143"	"7.0"	"100.000"	"74.0160"	"25064"	"25064"	"25040"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.2"	""	"11.9"	""	"8.6"	""	"11.3"	""	"13.3"	"11.1"	""	"711"	"20"	"35.000"	"28.000"	"0.343431087480879"	"14"	"0.002973"	"0.02955"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGLSHEEVD"	"[K].iLGLSHEEVD.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK4"	"Apoptosis facilitator Bcl-2-like protein 14 OS=Rattus norvegicus OX=10116 GN=Bcl2l14 PE=1 SV=1"	"Q6AYK4"	"Apoptosis facilitator Bcl-2-like protein 14 OS=Rattus norvegicus OX=10116 GN=Bcl2l14 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"670.86664"	"1340.72600"	"1340.72591"	"0.07"	"0.00004"	"7/84"	"7"	"84"	"211407.497375488"	"HCD"	"MS2"	"37.24083"	"7.3"	"100.000"	"73.9271"	"25041"	"25041"	"25014"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.3"	""	"8.6"	""	"7.8"	""	"8.1"	""	"15.2"	"19.8"	""	"704"	"10"	"35.000"	"28.000"	"3.15894935664263"	"13"	"0.004942"	"0.05291"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPVDSPELK"	"[KR].NIPVDSPELk.[E]"	"K10(TMT6plex)"	"1"	"2"	"P08934"	"Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"2"	"2"	"0.9123"	"0.0000"	"1"	"1"	"1"	"670.88403"	"1340.76079"	"1340.76230"	"-1.12"	"-0.00075"	"7/96"	"7"	"96"	"577317.109680176"	"HCD"	"MS2"	"0"	"23.9"	"100.000"	"58.0080"	"18601"	"18601"	"18575"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.5"	""	"40.6"	""	"24.7"	""	"42.8"	""	"44.8"	"32.7"	""	"651"	"57"	"35.000"	"28.000"	"7.10478586304897E-05"	"21"	"0.0003538"	"0.006978"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPVDSPELK"	"[KR].NIPVDSPELk.[E]"	"K10(TMT6plex)"	"1"	"2"	"P08934"	"Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"2"	"2"	"0.9057"	"0.0000"	"1"	"1"	"1"	"670.88403"	"1340.76079"	"1340.76230"	"-1.12"	"-0.00075"	"7/96"	"7"	"96"	"574159.995178223"	"HCD"	"MS2"	"11.74245"	"23.2"	"100.000"	"58.1988"	"18664"	"18664"	"18639"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.9"	""	"40.1"	""	"22.7"	""	"41.9"	""	"42.6"	"38.9"	""	"651"	"53"	"35.000"	"28.000"	"0.000179287905179959"	"20"	"0.0001301"	"0.004186"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPVDSPELK"	"[KR].NIPVDSPELk.[E]"	"K10(TMT6plex)"	"1"	"2"	"P08934"	"Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"670.88422"	"1340.76116"	"1340.76230"	"-0.85"	"-0.00057"	"8/96"	"8"	"96"	"213158.868774414"	"HCD"	"MS2"	"20.74258"	"14.8"	"100.000"	"58.3650"	"18747"	"18747"	"18719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.2"	""	"18.3"	""	"20.7"	""	"24.0"	""	"29.5"	"27.4"	""	"651"	"45"	"35.000"	"28.000"	"0.00113123020549763"	"15"	"0.002056"	"0.02247"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPVDSPELK"	"[KR].NIPVDSPELk.[E]"	"K10(TMT6plex)"	"1"	"2"	"P08934"	"Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"670.88477"	"1340.76225"	"1340.76230"	"-0.03"	"-0.00002"	"8/96"	"8"	"96"	"275492.761352539"	"HCD"	"MS2"	"0"	"16.8"	"100.000"	"58.5097"	"18791"	"18791"	"18767"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.6"	""	"24.6"	""	"16.7"	""	"30.7"	"0.7"	"25.3"	"34.3"	""	"654"	"46"	"35.000"	"28.000"	"0.000810117012846084"	"15"	"0.0008629"	"0.01067"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAHSDWVR"	"[K].lEAHSDWVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"447.90820"	"1341.71006"	"1341.71126"	"-0.90"	"-0.00040"	"8/72"	"8"	"72"	"2942321.50750732"	"HCD"	"MS2"	"10.15097"	"66.3"	"100.000"	"45.9976"	"13695"	"13695"	"13677"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.6"	""	"78.1"	""	"96.3"	""	"112.6"	""	"137.4"	"129.2"	""	"657"	"44"	"35.000"	"28.000"	"0.00138846639786251"	""	"0"	"0.0016"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAHSDWVR"	"[K].lEAHSDWVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"0"	"3"	"3"	"0.6444"	"0.0000"	"1"	"1"	"1"	"447.90842"	"1341.71070"	"1341.71126"	"-0.42"	"-0.00019"	"8/72"	"8"	"72"	"2929655.09228516"	"HCD"	"MS2"	"16.67212"	"67.8"	"100.000"	"45.8227"	"13636"	"13636"	"13611"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"76.8"	""	"91.6"	""	"101.1"	""	"107.7"	""	"130.7"	"135.9"	""	"676"	"45"	"35.000"	"28.000"	"0.000988363503711046"	""	"0"	"0.00173"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDGGVMQPVR"	"[K].gPDGGVMQPVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QYU4"	"Ketimine reductase mu-crystallin OS=Rattus norvegicus OX=10116 GN=Crym PE=1 SV=1"	"Q9QYU4"	"Ketimine reductase mu-crystallin OS=Rattus norvegicus OX=10116 GN=Crym PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.36060"	"1341.71391"	"1341.71464"	"-0.54"	"-0.00036"	"5/86"	"5"	"86"	"836519.003723145"	"HCD"	"MS2"	"19.48384"	"53.2"	"100.000"	"42.6360"	"12333"	"12333"	"12308"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"89.2"	""	"72.6"	""	"57.3"	""	"70.9"	"1.2"	"87.8"	"125.1"	""	"682"	"29"	"35.000"	"28.000"	"0.0437274728685703"	"14"	"0.0002479"	"0.005963"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDGGVMQPVR"	"[K].gPDGGVMQPVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QYU4"	"Ketimine reductase mu-crystallin OS=Rattus norvegicus OX=10116 GN=Crym PE=1 SV=1"	"Q9QYU4"	"Ketimine reductase mu-crystallin OS=Rattus norvegicus OX=10116 GN=Crym PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.36090"	"1341.71453"	"1341.71464"	"-0.08"	"-0.00006"	"8/86"	"8"	"86"	"682721.607055664"	"HCD"	"MS2"	"18.70793"	"45.3"	"100.000"	"42.4380"	"12263"	"12263"	"12236"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.5"	""	"53.3"	""	"52.3"	""	"58.7"	""	"94.3"	"99.4"	""	"688"	"31"	"35.000"	"28.000"	"0.0250356252760667"	"14"	"0.0001301"	"0.004525"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYEDETK"	"[K].vYEDETk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q920Q0"	"Paralemmin-1 OS=Rattus norvegicus OX=10116 GN=Palm PE=1 SV=1"	"Q920Q0"	"Paralemmin-1 OS=Rattus norvegicus OX=10116 GN=Palm PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"671.36737"	"1341.72746"	"1341.73022"	"-2.05"	"-0.00138"	"6/54"	"6"	"54"	"982133.425109863"	"HCD"	"MS2"	"0"	"82.0"	"100.000"	"40.9994"	"11676"	"11676"	"11660"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.9"	""	"56.8"	""	"75.6"	""	"178.1"	""	"189.0"	"193.0"	""	"669"	"31"	"35.000"	"28.000"	"0.0253160603384516"	"23"	"0.003507"	"0.03698"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYEDETK"	"[K].vYEDETk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q920Q0"	"Paralemmin-1 OS=Rattus norvegicus OX=10116 GN=Palm PE=1 SV=1"	"Q920Q0"	"Paralemmin-1 OS=Rattus norvegicus OX=10116 GN=Palm PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"671.36774"	"1341.72820"	"1341.73022"	"-1.51"	"-0.00101"	"12/54"	"12"	"54"	"913947.031311035"	"HCD"	"MS2"	"0"	"79.6"	"100.000"	"41.1723"	"11737"	"11737"	"11713"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"85.9"	""	"59.9"	""	"72.4"	""	"165.2"	""	"180.0"	"196.0"	""	"653"	"22"	"35.000"	"28.000"	"0.207435549249594"	"24"	"0.004942"	"0.05331"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVR"	"[K].vPEMAVPDVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"671.37360"	"1341.73992"	"1341.73979"	"0.10"	"0.00006"	"6/82"	"6"	"82"	"811283.224121094"	"HCD"	"MS2"	"46.76542"	"34.3"	"100.000"	"78.2263"	"26771"	"26771"	"26761"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.2"	""	"47.2"	""	"48.5"	""	"49.9"	"0.4"	"67.3"	"59.9"	""	"654"	"19"	"35.000"	"28.000"	"0.428102488820806"	"22"	"0.005309"	"0.06043"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVR"	"[K].vPEMAVPDVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"671.37372"	"1341.74016"	"1341.73979"	"0.28"	"0.00019"	"11/82"	"11"	"82"	"592266.481079102"	"HCD"	"MS2"	"38.98928"	"22.7"	"100.000"	"78.1854"	"26748"	"26748"	"26729"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.9"	""	"27.3"	""	"28.4"	""	"34.1"	""	"44.3"	"43.4"	""	"654"	"27"	"35.000"	"28.000"	"0.0676936221054671"	"22"	"0.002547"	"0.02522"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPGQVTEAVK"	"[K].SPPGQVTEAVk.[V]"	"K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.38214"	"1341.75701"	"1341.75755"	"-0.40"	"-0.00027"	"7/106"	"7"	"106"	"982860.922241211"	"HCD"	"MS2"	"38.55299"	"68.5"	"100.000"	"36.8091"	"9969"	"9969"	"9940"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"101.0"	""	"104.5"	""	"97.3"	""	"103.4"	"0.1"	"127.6"	"114.3"	""	"621"	"40"	"34.000"	"27.000"	"0.00309073382087649"	"15"	"0.001546"	"0.01921"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLQQHK"	"[R].eTLQQHk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"671.39764"	"1341.78801"	"1341.78907"	"-0.79"	"-0.00053"	"10/56"	"10"	"56"	"393327.449401855"	"HCD"	"MS2"	"33.00707"	"27.9"	"100.000"	"24.9694"	"5177"	"5177"	"5157"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.6"	""	"36.2"	""	"34.3"	""	"47.6"	"0.6"	"50.8"	"49.1"	""	"529"	"22"	"34.000"	"27.000"	"0.185534926432082"	"19"	"0.002711"	"0.02593"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLQQHK"	"[R].eTLQQHk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"447.93423"	"1341.78815"	"1341.78907"	"-0.69"	"-0.00031"	"6/56"	"6"	"56"	"11292172.8400269"	"HCD"	"MS2"	"22.17569"	"477.8"	"100.000"	"25.0364"	"5189"	"5189"	"5176"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"787.1"	""	"541.2"	""	"590.2"	""	"789.3"	""	"904.9"	"915.5"	""	"529"	"32"	"34.000"	"27.000"	"0.0154321230080405"	"27"	"0.008052"	"0.09781"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLQQHK"	"[R].eTLQQHk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"671.39832"	"1341.78935"	"1341.78907"	"0.21"	"0.00014"	"5/56"	"5"	"56"	"322924.012451172"	"HCD"	"MS2"	"38.08515"	"23.4"	"100.000"	"25.1029"	"5216"	"5216"	"5196"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.5"	""	"27.6"	""	"28.3"	""	"38.9"	""	"45.0"	"43.1"	""	"495"	"15"	"33.000"	"26.000"	"0.737182816283725"	"19"	"0.008478"	"0.1032"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AENGDFASFR"	"[K].aENGDFASFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"671.83295"	"1342.65862"	"1342.65889"	"-0.21"	"-0.00014"	"8/98"	"8"	"98"	"4602013.05096436"	"HCD"	"MS2"	"40.88436"	"206.0"	"100.000"	"55.7140"	"17666"	"17666"	"17651"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"348.8"	""	"298.8"	""	"237.3"	""	"314.1"	""	"378.3"	"375.4"	""	"414"	"42"	"33.000"	"26.000"	"0.0013771154333376"	"18"	"0"	"4.833E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AENGDFASFR"	"[K].aENGDFASFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"671.83337"	"1342.65947"	"1342.65889"	"0.43"	"0.00029"	"8/98"	"8"	"98"	"4724777.30609131"	"HCD"	"MS2"	"43.04499"	"217.7"	"100.000"	"55.9001"	"17727"	"17727"	"17713"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"341.8"	""	"305.1"	""	"256.0"	""	"345.1"	""	"409.2"	"409.1"	""	"419"	"49"	"33.000"	"26.000"	"0.000292539171641219"	"19"	"0"	"2.87E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFDDTFDR"	"[R].vVFDDTFDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"671.84497"	"1342.68266"	"1342.68405"	"-1.03"	"-0.00069"	"8/72"	"8"	"72"	"363379.267028809"	"HCD"	"MS2"	"0"	"22.5"	"100.000"	"83.4692"	"28867"	"28867"	"28852"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.8"	""	"4.0"	""	"15.3"	""	"14.7"	""	"15.8"	"110.8"	""	"505"	"44"	"34.000"	"27.000"	"0.000996004687740078"	"19"	"0"	"0.0003162"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFDDTFDR"	"[R].vVFDDTFDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.84521"	"1342.68315"	"1342.68405"	"-0.67"	"-0.00045"	"12/72"	"12"	"72"	"1700938.67950439"	"HCD"	"MS2"	"1.122316"	"81.7"	"100.000"	"84.0726"	"29104"	"29104"	"29088"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"190.7"	""	"23.5"	""	"32.5"	""	"29.3"	"1.4"	"31.2"	"467.6"	""	"502"	"36"	"33.000"	"27.000"	"0.00575007780844711"	"15"	"0"	"0.001366"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFDDTFDR"	"[R].vVFDDTFDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.84534"	"1342.68340"	"1342.68405"	"-0.48"	"-0.00032"	"9/72"	"9"	"72"	"208318.532165527"	"HCD"	"MS2"	"12.82942"	"12.9"	"100.000"	"84.3614"	"29221"	"29221"	"29203"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.1"	""	"4.6"	""	"9.5"	""	"8.2"	""	"11.2"	"61.7"	""	"503"	"23"	"34.000"	"27.000"	"0.139488366808915"	"14"	"0.0008629"	"0.009591"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFDDTFDR"	"[R].vVFDDTFDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"671.84540"	"1342.68352"	"1342.68405"	"-0.39"	"-0.00026"	"8/72"	"8"	"72"	"7621715.27575684"	"HCD"	"MS2"	"0.5735452"	"320.9"	"100.000"	"83.7449"	"28976"	"28976"	"28966"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"801.2"	""	"73.0"	""	"117.3"	""	"98.4"	""	"97.3"	"1876.8"	""	"503"	"41"	"34.000"	"27.000"	"0.00192104699569789"	"16"	"0"	"0.0006349"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFDDTFDR"	"[R].vVFDDTFDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"671.84558"	"1342.68389"	"1342.68405"	"-0.12"	"-0.00008"	"8/72"	"8"	"72"	"2281872.31713867"	"HCD"	"MS2"	"1.06797"	"104.5"	"100.000"	"84.0430"	"29094"	"29094"	"29078"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"241.9"	""	"19.8"	""	"39.0"	""	"33.2"	""	"41.1"	"624.3"	""	"498"	"37"	"33.000"	"26.000"	"0.00462593309317833"	"18"	"0"	"0.0003217"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFDDTFDR"	"[R].vVFDDTFDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"671.84583"	"1342.68437"	"1342.68405"	"0.24"	"0.00016"	"12/72"	"12"	"72"	"8210047.01837158"	"HCD"	"MS2"	"0.5507962"	"360.5"	"100.000"	"83.7607"	"28980"	"28980"	"28967"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"917.6"	""	"76.0"	""	"124.9"	""	"113.4"	""	"117.3"	"2084.8"	""	"491"	"40"	"33.000"	"26.000"	"0.00234991144502885"	"16"	"0"	"0.0006449"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFDDTFDR"	"[R].vVFDDTFDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"671.84589"	"1342.68450"	"1342.68405"	"0.33"	"0.00022"	"8/72"	"8"	"72"	"392559.271179199"	"HCD"	"MS2"	"0"	"21.2"	"100.000"	"83.4735"	"28866"	"28866"	"28853"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.7"	""	"8.7"	""	"10.4"	""	"12.5"	""	"14.2"	"102.6"	""	"494"	"46"	"33.000"	"26.000"	"0.000664809096569948"	"17"	"0"	"0.000229"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPQAEALDR"	"[R].tLPQAEALDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"671.87921"	"1342.75115"	"1342.75280"	"-1.23"	"-0.00082"	"13/100"	"13"	"100"	"914377.756469727"	"HCD"	"MS2"	"18.19132"	"44.3"	"100.000"	"55.0943"	"17413"	"17413"	"17384"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.7"	""	"48.9"	""	"66.2"	""	"73.4"	""	"86.9"	"75.6"	""	"657"	"48"	"35.000"	"28.000"	"0.000505283799339547"	""	"0"	"0.0006071"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALALANGTPR"	"[K].eALALAnGTPR.[G]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"671.87939"	"1342.75151"	"1342.75280"	"-0.96"	"-0.00064"	"9/104"	"9"	"104"	"347721.904602051"	"HCD"	"MS2"	"0"	"23.7"	"100.000"	"58.6413"	"18860"	"18860"	"18831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.7"	""	"31.1"	""	"29.6"	""	"37.9"	""	"54.2"	"38.6"	""	"657"	"45"	"35.000"	"28.000"	"0.0010035415856913"	"26"	"0"	"0.0001248"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALALANGTPR"	"[K].eALALAnGTPR.[G]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"671.87982"	"1342.75237"	"1342.75280"	"-0.32"	"-0.00021"	"8/104"	"8"	"104"	"799009.367248535"	"HCD"	"MS2"	"37.51902"	"45.7"	"100.000"	"56.9827"	"18169"	"18169"	"18147"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"77.2"	""	"59.4"	""	"68.2"	""	"58.7"	""	"86.6"	"83.0"	""	"648"	"41"	"35.000"	"28.000"	"0.00236889063048627"	"25"	"0"	"6.272E-05"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"TLPQAEALDR"	"[R].tLPQAEALDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"671.87982"	"1342.75237"	"1342.75280"	"-0.32"	"-0.00021"	"8/100"	"8"	"100"	"1140951.79095459"	"HCD"	"MS2"	"12.51956"	"55.6"	"100.000"	"55.3428"	"17500"	"17500"	"17479"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.4"	""	"68.5"	""	"75.7"	""	"91.1"	""	"107.4"	"109.6"	""	"648"	"21"	"35.000"	"28.000"	"0.234717251064297"	"21"	"0.000936"	"0.01136"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPQAEALDR"	"[R].tLPQAEALDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"671.87982"	"1342.75237"	"1342.75280"	"-0.32"	"-0.00021"	"14/100"	"14"	"100"	"3687328.28674316"	"HCD"	"MS2"	"40.64689"	"169.2"	"100.000"	"55.6795"	"17652"	"17652"	"17635"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"274.9"	""	"233.3"	""	"194.6"	""	"278.7"	"0.4"	"312.5"	"308.3"	""	"648"	"20"	"35.000"	"28.000"	"0.294811900332849"	"27"	"0"	"0.0002954"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALALANGTPR"	"[K].eALALAnGTPR.[G]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"671.87988"	"1342.75249"	"1342.75280"	"-0.23"	"-0.00015"	"8/104"	"8"	"104"	"883148.848815918"	"HCD"	"MS2"	"33.27453"	"47.3"	"100.000"	"56.7848"	"18102"	"18102"	"18086"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"77.6"	""	"63.0"	""	"65.9"	""	"69.5"	"1.2"	"88.8"	"81.5"	""	"659"	"47"	"35.000"	"28.000"	"0.000598212410883749"	"26"	"0"	"3.721E-05"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPQAEALDR"	"[R].tLPQAEALDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"671.87988"	"1342.75249"	"1342.75280"	"-0.23"	"-0.00015"	"13/100"	"13"	"100"	"4789361.44500732"	"HCD"	"MS2"	"0"	"173.1"	"100.000"	"55.3754"	"17528"	"17528"	"17511"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"284.0"	"3.2"	"217.0"	""	"223.6"	""	"278.0"	"1.1"	"315.8"	"316.5"	""	"659"	"45"	"35.000"	"28.000"	"0.00107363192980162"	""	"0"	"0.0001026"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPQAEALDR"	"[R].tLPQAEALDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"2"	"2"	"0.6585"	"0.0000"	"1"	"1"	"1"	"671.88013"	"1342.75298"	"1342.75280"	"0.14"	"0.00009"	"9/100"	"9"	"100"	"5141177.95922852"	"HCD"	"MS2"	"0"	"185.4"	"100.000"	"55.6375"	"17620"	"17620"	"17602"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"288.7"	"2.9"	"216.6"	""	"241.2"	""	"315.2"	""	"339.8"	"354.0"	""	"652"	"41"	"35.000"	"28.000"	"0.00246727523776837"	""	"0"	"5.551E-05"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALALANGTPR"	"[K].eALALAnGTPR.[G]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"671.88068"	"1342.75408"	"1342.75280"	"0.95"	"0.00064"	"8/104"	"8"	"104"	"419009.592102051"	"HCD"	"MS2"	"0"	"26.1"	"100.000"	"58.9310"	"18963"	"18963"	"18936"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.9"	""	"36.5"	""	"31.8"	""	"45.7"	""	"55.2"	"48.1"	""	"692"	"48"	"35.000"	"28.000"	"0.000604054464910495"	""	"0"	"0.0002212"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AENGDFASFR"	"[K].aEnGDFASFR.[V]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"672.32422"	"1343.64116"	"1343.64291"	"-1.30"	"-0.00087"	"7/98"	"7"	"98"	"2076447.97772217"	"HCD"	"MS2"	"36.07845"	"124.4"	"100.000"	"61.5744"	"20006"	"20006"	"19985"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"214.1"	""	"147.1"	""	"124.1"	""	"202.6"	"2.8"	"253.9"	"234.8"	""	"309"	"39"	"31.000"	"24.000"	"0.00215738911783143"	"15"	"0"	"3.9E-05"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AENGDFASFR"	"[K].aEnGDFASFR.[V]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"672.32428"	"1343.64128"	"1343.64291"	"-1.21"	"-0.00081"	"8/98"	"8"	"98"	"2313316.0144043"	"HCD"	"MS2"	"48.53478"	"129.9"	"100.000"	"61.4577"	"19974"	"19974"	"19953"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"188.0"	""	"178.0"	""	"140.0"	""	"183.0"	""	"280.3"	"267.5"	""	"317"	"15"	"32.000"	"25.000"	"0.493207039431304"	"16"	"0"	"0.0003767"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISTPVDVNNR"	"[K].iSTPVDVNNR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"672.37775"	"1343.74822"	"1343.74804"	"0.13"	"0.00009"	"6/84"	"6"	"84"	"1314852.30700684"	"HCD"	"MS2"	"5.174317"	"84.7"	"100.000"	"49.2311"	"15024"	"15024"	"15004"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"114.0"	""	"114.2"	""	"108.9"	""	"135.6"	"7.6"	"155.0"	"168.2"	""	"687"	"28"	"35.000"	"28.000"	"0.0592825315898635"	"19"	"0.003449"	"0.0347"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISTPVDVNNR"	"[K].iSTPVDVNNR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"672.37787"	"1343.74846"	"1343.74804"	"0.31"	"0.00021"	"6/84"	"6"	"84"	"2045125.14874268"	"HCD"	"MS2"	"14.73272"	"115.6"	"100.000"	"49.5083"	"15125"	"15125"	"15105"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"181.1"	""	"131.4"	""	"141.6"	""	"198.1"	"9.9"	"213.9"	"220.0"	""	"685"	"32"	"35.000"	"28.000"	"0.0222669418942508"	"23"	"0.0003538"	"0.007038"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQNPPQSK"	"[R].sQNPPQSk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q792H5"	"CUGBP Elav-like family member 2 OS=Rattus norvegicus OX=10116 GN=Celf2 PE=2 SV=1"	"Q792H5; Q4QQT3"	"CUGBP Elav-like family member 2 OS=Rattus norvegicus OX=10116 GN=Celf2 PE=2 SV=1; CUGBP Elav-like family member 1 OS=Rattus norvegicus OX=10116 GN=Celf1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"672.38641"	"1343.76555"	"1343.76833"	"-2.07"	"-0.00139"	"9/80"	"9"	"80"	"364945.221252441"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"23.3330"	"4508"	"4508"	"4479"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.6"	""	"18.6"	""	"16.1"	""	"40.4"	""	"40.0"	"35.6"	""	"695"	"21"	"35.000"	"28.000"	"0.248287473311241"	"14"	"0.006685"	"0.07512"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQNPPQSK"	"[R].sQNPPQSk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q792H5"	"CUGBP Elav-like family member 2 OS=Rattus norvegicus OX=10116 GN=Celf2 PE=2 SV=1"	"Q792H5; Q4QQT3"	"CUGBP Elav-like family member 2 OS=Rattus norvegicus OX=10116 GN=Celf2 PE=2 SV=1; CUGBP Elav-like family member 1 OS=Rattus norvegicus OX=10116 GN=Celf1 PE=2 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"672.38770"	"1343.76811"	"1343.76833"	"-0.16"	"-0.00011"	"5/80"	"5"	"80"	"390841.637634277"	"HCD"	"MS2"	"25.69051"	"20.6"	"100.000"	"23.2985"	"4511"	"4511"	"4483"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.0"	""	"19.9"	""	"22.9"	""	"36.0"	""	"42.2"	"50.2"	""	"673"	"17"	"35.000"	"28.000"	"0.677618210078693"	"21"	"0.00379"	"0.03888"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEFGESDLR"	"[K].yEFGESDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"672.83569"	"1344.66411"	"1344.66331"	"0.59"	"0.00040"	"5/74"	"5"	"74"	"857585.73034668"	"HCD"	"MS2"	"15.80975"	"50.9"	"100.000"	"64.7909"	"21306"	"21306"	"21287"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.6"	""	"52.3"	""	"59.9"	""	"87.1"	"3.4"	"106.3"	"107.9"	""	"453"	"15"	"33.000"	"26.000"	"0.803652326614049"	"13"	"0.001374"	"0.01615"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEFGESDLR"	"[K].yEFGESDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"672.83606"	"1344.66484"	"1344.66331"	"1.14"	"0.00077"	"7/74"	"7"	"74"	"802141.75177002"	"HCD"	"MS2"	"15.71328"	"44.7"	"100.000"	"64.7685"	"21312"	"21312"	"21294"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.2"	""	"48.4"	""	"52.5"	""	"83.7"	"1.7"	"89.0"	"89.7"	""	"456"	"12"	"33.000"	"26.000"	"1.41884465018568"	"13"	"0.0023"	"0.02321"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SESGYGFNVR"	"[K].sESGYGFNVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4V4"	"Sorting nexin-27 OS=Rattus norvegicus OX=10116 GN=Snx27 PE=1 SV=2"	"Q8K4V4"	"Sorting nexin-27 OS=Rattus norvegicus OX=10116 GN=Snx27 PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"672.84045"	"1344.67363"	"1344.67454"	"-0.68"	"-0.00046"	"8/80"	"8"	"80"	"1483171.39233398"	"HCD"	"MS2"	"0"	"90.3"	"100.000"	"50.0762"	"15369"	"15369"	"15350"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"150.8"	""	"119.7"	""	"122.6"	""	"136.8"	"0.6"	"169.7"	"154.7"	""	"516"	"48"	"34.000"	"27.000"	"0.000425225897013581"	"19"	"0"	"6.351E-05"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SESGYGFNVR"	"[K].sESGYGFNVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4V4"	"Sorting nexin-27 OS=Rattus norvegicus OX=10116 GN=Snx27 PE=1 SV=2"	"Q8K4V4"	"Sorting nexin-27 OS=Rattus norvegicus OX=10116 GN=Snx27 PE=1 SV=2"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"672.84125"	"1344.67522"	"1344.67454"	"0.50"	"0.00034"	"8/80"	"8"	"80"	"1600005.39776611"	"HCD"	"MS2"	"0"	"97.2"	"100.000"	"50.4502"	"15510"	"15510"	"15486"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"151.8"	""	"132.1"	""	"153.6"	""	"149.1"	""	"168.4"	"170.2"	""	"543"	"46"	"34.000"	"27.000"	"0.000666453470608486"	"22"	"0"	"7.664E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELQELNDR"	"[K].vELQELNDR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.1765"	"0.0000"	"1"	"1"	"1"	"672.86774"	"1344.72820"	"1344.73206"	"-2.87"	"-0.00193"	"7/86"	"7"	"86"	"1929934.9876709"	"HCD"	"MS2"	"43.50615"	"110.7"	"100.000"	"61.4164"	"19957"	"19957"	"19937"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"152.9"	""	"143.6"	""	"127.1"	""	"166.0"	""	"235.6"	"228.6"	""	"715"	"17"	"35.000"	"28.000"	"0.6970694444135"	"28"	"0.0001301"	"0.00399"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELQELNDR"	"[K].vELQELNDR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"672.86847"	"1344.72966"	"1344.73206"	"-1.78"	"-0.00120"	"7/86"	"7"	"86"	"2764801.20196533"	"HCD"	"MS2"	"53.82224"	"138.6"	"100.000"	"60.8129"	"19711"	"19711"	"19689"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"186.4"	""	"194.2"	""	"155.7"	""	"197.7"	""	"293.5"	"289.4"	""	"715"	"41"	"35.000"	"28.000"	"0.00314974972100365"	"25"	"0"	"0.0004252"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELQELNDR"	"[K].vELQELNDR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"672.86871"	"1344.73015"	"1344.73206"	"-1.42"	"-0.00095"	"6/86"	"6"	"86"	"3141591.54626465"	"HCD"	"MS2"	"49.3887"	"156.1"	"100.000"	"60.9967"	"19770"	"19770"	"19750"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"220.2"	""	"210.5"	""	"180.5"	""	"226.0"	""	"304.7"	"345.0"	""	"707"	"38"	"35.000"	"28.000"	"0.00598948412458131"	"24"	"0"	"0.000912"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELQELNDR"	"[K].vELQELNDR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"672.86926"	"1344.73125"	"1344.73206"	"-0.60"	"-0.00041"	"6/86"	"6"	"86"	"10881679.8085938"	"HCD"	"MS2"	"0.2536817"	"370.1"	"77.059"	"61.0962"	"19827"	"19827"	"19810"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"457.0"	""	"445.7"	""	"430.7"	""	"504.9"	""	"789.7"	"892.7"	""	"748"	"41"	"35.000"	"28.000"	"0.00315407199403839"	"28"	"0"	"0.0007226"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAELLGEGDGR"	"[K].vAELLGEGDGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQM2"	"Kinesin light chain 4 OS=Rattus norvegicus OX=10116 GN=Klc4 PE=1 SV=1"	"Q5PQM2"	"Kinesin light chain 4 OS=Rattus norvegicus OX=10116 GN=Klc4 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"672.86969"	"1344.73210"	"1344.73206"	"0.03"	"0.00002"	"7/92"	"7"	"92"	"149994.325134277"	"HCD"	"MS2"	"22.47504"	"9.3"	"100.000"	"75.6740"	"25741"	"25741"	"25719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.6"	""	"11.8"	""	"10.3"	""	"19.3"	""	"19.4"	"14.5"	""	"767"	"26"	"35.000"	"28.000"	"0.0978960949570588"	"18"	"0"	"0.0032"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELQELNDR"	"[K].vELQELNDR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"672.86993"	"1344.73259"	"1344.73206"	"0.40"	"0.00027"	"13/86"	"13"	"86"	"8605733.0692749"	"HCD"	"MS2"	"0.2450058"	"384.2"	"96.483"	"61.2890"	"19890"	"19890"	"19873"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"476.6"	""	"471.3"	""	"444.6"	""	"520.7"	"1.4"	"850.0"	"889.3"	""	"761"	"46"	"35.000"	"28.000"	"0.000877717305307986"	"28"	"0"	"0.0004099"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAELLGEGDGR"	"[K].vAELLGEGDGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQM2"	"Kinesin light chain 4 OS=Rattus norvegicus OX=10116 GN=Klc4 PE=1 SV=1"	"Q5PQM2"	"Kinesin light chain 4 OS=Rattus norvegicus OX=10116 GN=Klc4 PE=1 SV=1"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"672.87097"	"1344.73467"	"1344.73206"	"1.94"	"0.00130"	"7/92"	"7"	"92"	"182842.287841797"	"HCD"	"MS2"	"26.98901"	"10.4"	"100.000"	"75.6656"	"25728"	"25728"	"25701"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.9"	""	"12.6"	""	"8.8"	""	"19.3"	""	"25.5"	"20.7"	""	"726"	"39"	"35.000"	"28.000"	"0.00461218400190701"	"26"	"0"	"0.000333"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISNAQNAELR"	"[K].iSNAQNAELR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"672.87469"	"1344.74211"	"1344.74329"	"-0.88"	"-0.00059"	"7/98"	"7"	"98"	"1858252.09796143"	"HCD"	"MS2"	"0"	"91.4"	"100.000"	"38.4047"	"10611"	"10611"	"10590"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"167.5"	""	"114.9"	""	"129.6"	""	"147.9"	"0.3"	"148.0"	"156.2"	""	"795"	"50"	"35.000"	"29.000"	"0.000408636478505273"	"27"	"0"	"9.888E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISNAQNAELR"	"[K].iSNAQNAELR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.8302"	"0.0000"	"1"	"1"	"1"	"672.87506"	"1344.74285"	"1344.74329"	"-0.33"	"-0.00022"	"7/98"	"7"	"98"	"1712702.80657959"	"HCD"	"MS2"	"7.644411"	"72.0"	"100.000"	"38.2153"	"10542"	"10542"	"10522"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.6"	""	"86.4"	""	"89.4"	""	"120.1"	"0.5"	"133.0"	"139.9"	""	"786"	"53"	"35.000"	"28.000"	"0.000186806743795523"	"25"	"0"	"6.319E-05"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHEEGVIYR"	"[R].lHEEGVIYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"448.91995"	"1344.74530"	"1344.74732"	"-1.50"	"-0.00067"	"8/66"	"8"	"66"	"4379418.48468018"	"HCD"	"MS2"	"5.231149"	"61.4"	"100.000"	"41.0271"	"11687"	"11687"	"11667"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"86.4"	""	"80.2"	""	"108.6"	""	"89.8"	"1.1"	"110.3"	"104.7"	""	"785"	"45"	"35.000"	"28.000"	"0.00112418985318833"	"20"	"0"	"0.0002163"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHEEGVIYR"	"[R].lHEEGVIYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"448.92014"	"1344.74585"	"1344.74732"	"-1.09"	"-0.00049"	"7/66"	"7"	"66"	"4653363.9151001"	"HCD"	"MS2"	"5.213441"	"63.3"	"100.000"	"41.1998"	"11748"	"11748"	"11728"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.4"	""	"95.8"	""	"109.4"	""	"92.9"	""	"110.8"	"109.7"	""	"796"	"36"	"35.000"	"29.000"	"0.0107865626949255"	"19"	"0"	"0.0006439"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYFDQYPR"	"[K].qYFDQYPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"673.33984"	"1345.67241"	"1345.67382"	"-1.04"	"-0.00070"	"6/70"	"6"	"70"	"1217265.45080566"	"HCD"	"MS2"	"50.09678"	"97.2"	"100.000"	"57.3953"	"18351"	"18351"	"18329"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"132.4"	""	"129.6"	""	"138.2"	""	"145.9"	""	"192.4"	"189.9"	""	"547"	"25"	"34.000"	"27.000"	"0.0801599302575964"	"17"	"0.003449"	"0.03266"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYFDQYPR"	"[K].qYFDQYPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"673.34009"	"1345.67290"	"1345.67382"	"-0.68"	"-0.00046"	"6/70"	"6"	"70"	"1225377.2376709"	"HCD"	"MS2"	"53.10687"	"104.8"	"100.000"	"57.5863"	"18414"	"18414"	"18394"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"140.7"	""	"134.3"	""	"132.4"	""	"169.9"	""	"212.0"	"207.8"	""	"543"	"25"	"34.000"	"27.000"	"0.0939225410797922"	"16"	"0.0023"	"0.02404"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEETVLGLR"	"[R].eAEETVLGLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U4E6"	"Golgin subfamily A member 4 OS=Rattus norvegicus OX=10116 GN=Golga4 PE=1 SV=2"	"Q5U4E6"	"Golgin subfamily A member 4 OS=Rattus norvegicus OX=10116 GN=Golga4 PE=1 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"673.37927"	"1345.75127"	"1345.75246"	"-0.89"	"-0.00060"	"6/80"	"6"	"80"	"354947.510498047"	"HCD"	"MS2"	"40.87041"	"24.0"	"100.000"	"68.4170"	"22783"	"22783"	"22757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.3"	""	"31.7"	""	"29.6"	""	"39.6"	""	"47.2"	"46.6"	""	"891"	"18"	"36.000"	"29.000"	"0.680530678945062"	"24"	"0.000936"	"0.01268"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEETVLGLR"	"[R].eAEETVLGLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U4E6"	"Golgin subfamily A member 4 OS=Rattus norvegicus OX=10116 GN=Golga4 PE=1 SV=2"	"Q5U4E6"	"Golgin subfamily A member 4 OS=Rattus norvegicus OX=10116 GN=Golga4 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"673.37976"	"1345.75224"	"1345.75246"	"-0.16"	"-0.00011"	"7/80"	"7"	"80"	"343080.067321777"	"HCD"	"MS2"	"52.26592"	"25.3"	"100.000"	"68.2912"	"22746"	"22746"	"22719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.2"	""	"31.8"	""	"33.4"	""	"35.7"	""	"47.1"	"55.5"	""	"909"	"32"	"36.000"	"29.000"	"0.0288757908526617"	"26"	"0.0001301"	"0.004408"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVQPGTEK"	"[K].eVQPGTEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTV1"	"Chitinase-3-like protein 1 OS=Rattus norvegicus OX=10116 GN=Chi3l1 PE=2 SV=3"	"Q9WTV1"	"Chitinase-3-like protein 1 OS=Rattus norvegicus OX=10116 GN=Chi3l1 PE=2 SV=3"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"673.38977"	"1345.77226"	"1345.77275"	"-0.36"	"-0.00024"	"7/78"	"7"	"78"	"818935.20098877"	"HCD"	"MS2"	"44.77283"	"58.0"	"100.000"	"32.4351"	"8196"	"8196"	"8170"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"95.4"	""	"69.0"	""	"59.9"	""	"112.9"	""	"107.7"	"108.1"	""	"802"	"21"	"36.000"	"29.000"	"0.328960969276257"	"24"	"0.007686"	"0.09433"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVQPGTEK"	"[K].eVQPGTEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTV1"	"Chitinase-3-like protein 1 OS=Rattus norvegicus OX=10116 GN=Chi3l1 PE=2 SV=3"	"Q9WTV1"	"Chitinase-3-like protein 1 OS=Rattus norvegicus OX=10116 GN=Chi3l1 PE=2 SV=3"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"673.39038"	"1345.77349"	"1345.77275"	"0.55"	"0.00037"	"12/78"	"12"	"78"	"867091.813110352"	"HCD"	"MS2"	"28.89961"	"65.0"	"100.000"	"32.4094"	"8192"	"8192"	"8164"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"110.4"	""	"85.1"	""	"70.6"	""	"114.4"	""	"113.5"	"125.8"	""	"849"	"23"	"36.000"	"29.000"	"0.206955844048887"	"23"	"0.007627"	"0.09135"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGQEAILK"	"[R].eGQEAILk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"673.40753"	"1345.80779"	"1345.80914"	"-1.00"	"-0.00068"	"6/72"	"6"	"72"	"1795275.97509766"	"HCD"	"MS2"	"0"	"141.8"	"100.000"	"51.4074"	"15900"	"15900"	"15883"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"216.5"	""	"154.0"	""	"185.7"	""	"245.1"	""	"270.4"	"274.1"	""	"718"	"27"	"35.000"	"28.000"	"0.0680917425714802"	"26"	"0.003449"	"0.03278"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGQEAILK"	"[R].eGQEAILk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"673.40759"	"1345.80791"	"1345.80914"	"-0.91"	"-0.00061"	"6/72"	"6"	"72"	"1745522.21099854"	"HCD"	"MS2"	"0"	"137.9"	"100.000"	"51.0634"	"15770"	"15770"	"15753"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"208.9"	""	"155.5"	""	"187.3"	""	"229.6"	"0.0"	"253.5"	"272.4"	""	"718"	"29"	"35.000"	"28.000"	"0.0423735108198971"	"25"	"0.002547"	"0.02548"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLAAVEAK"	"[K].aDLAAVEAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"673.40796"	"1345.80864"	"1345.80914"	"-0.37"	"-0.00025"	"14/74"	"14"	"74"	"880962.709777832"	"HCD"	"MS2"	"23.36191"	"57.8"	"100.000"	"64.5024"	"21193"	"21193"	"21177"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.9"	""	"66.4"	""	"67.0"	""	"100.4"	""	"121.1"	"117.1"	""	"716"	"31"	"35.000"	"28.000"	"0.0280467812110304"	"22"	"0"	"0.0004719"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLAAVEAK"	"[K].aDLAAVEAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"673.40802"	"1345.80876"	"1345.80914"	"-0.28"	"-0.00019"	"8/74"	"8"	"74"	"1179096.29742432"	"HCD"	"MS2"	"39.44186"	"83.8"	"100.000"	"64.4923"	"21203"	"21203"	"21183"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"112.9"	""	"104.0"	""	"109.6"	""	"137.1"	""	"167.5"	"164.2"	""	"726"	"40"	"35.000"	"28.000"	"0.00369748673863644"	"23"	"0"	"0.0002479"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFRPDDPTR"	"[K].nFRPDDPTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"0.3158"	"0.0000"	"1"	"1"	"3"	"673.85175"	"1346.69621"	"1346.70143"	"-3.87"	"-0.00261"	"9/86"	"9"	"86"	"526186.29095459"	"HCD"	"MS2"	"25.17299"	"21.7"	"100.000"	"30.2532"	"7320"	"7320"	"7296"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.3"	""	"30.2"	""	"27.0"	""	"36.7"	"1.0"	"41.8"	"37.9"	""	"685"	"19"	"35.000"	"28.000"	"0.469527004911462"	"27"	"0.008728"	"0.1127"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPVAENFR"	"[K].nGNPVAENFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"673.85339"	"1346.69951"	"1346.70143"	"-1.42"	"-0.00096"	"8/90"	"8"	"90"	"617372.772033691"	"HCD"	"MS2"	"0"	"44.3"	"100.000"	"42.5507"	"12309"	"12309"	"12284"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.6"	""	"52.1"	""	"56.0"	""	"60.0"	"3.6"	"81.2"	"95.5"	""	"683"	"44"	"35.000"	"28.000"	"0.00147363764736682"	"17"	"0"	"2.996E-05"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFRPDDPTR"	"[K].nFRPDDPTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"449.57156"	"1346.70014"	"1346.70143"	"-0.96"	"-0.00043"	"10/86"	"10"	"86"	"10654908.8635864"	"HCD"	"MS2"	"25.6466"	"280.5"	"100.000"	"30.1730"	"7287"	"7287"	"7269"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"379.7"	""	"314.4"	""	"348.1"	""	"533.1"	""	"546.6"	"540.7"	""	"718"	"15"	"35.000"	"28.000"	"1.16706339761371"	"18"	"0.006189"	"0.07028"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFRPDDPTR"	"[K].nFRPDDPTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"673.85388"	"1346.70049"	"1346.70143"	"-0.70"	"-0.00047"	"10/86"	"10"	"86"	"468800.989929199"	"HCD"	"MS2"	"0"	"20.3"	"100.000"	"30.3017"	"7328"	"7328"	"7306"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.8"	""	"23.8"	""	"28.4"	""	"31.9"	"1.3"	"40.8"	"37.7"	""	"727"	"18"	"35.000"	"28.000"	"0.64195474781942"	"23"	"0.000936"	"0.01209"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPVAENFR"	"[K].nGNPVAENFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"673.85388"	"1346.70049"	"1346.70143"	"-0.70"	"-0.00047"	"7/90"	"7"	"90"	"649858.788757324"	"HCD"	"MS2"	"6.039879"	"44.8"	"100.000"	"42.6614"	"12343"	"12343"	"12322"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.5"	""	"53.4"	""	"58.2"	""	"66.4"	"1.7"	"85.5"	"82.3"	""	"727"	"38"	"35.000"	"28.000"	"0.0055527026216954"	"17"	"0"	"0.0005279"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFRPDDPTR"	"[K].nFRPDDPTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"3"	"3"	"0.0667"	"0.0000"	"1"	"1"	"1"	"449.57202"	"1346.70151"	"1346.70143"	"0.06"	"0.00003"	"10/86"	"10"	"86"	"10157424.5638428"	"HCD"	"MS2"	"24.03029"	"270.3"	"100.000"	"30.2194"	"7294"	"7294"	"7274"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"357.8"	""	"297.4"	""	"316.6"	""	"535.4"	""	"531.1"	"529.9"	""	"733"	"15"	"35.000"	"28.000"	"1.16969862389443"	"27"	"0.005921"	"0.06785"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNQIGTVNDR"	"[R].tNQIGTVNDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"0"	"2"	"2"	"0.7458"	"0.0000"	"1"	"1"	"1"	"673.86420"	"1346.72112"	"1346.72256"	"-1.07"	"-0.00072"	"8/104"	"8"	"104"	"2626112.4833374"	"HCD"	"MS2"	"0"	"128.4"	"100.000"	"29.9390"	"7192"	"7192"	"7169"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"250.4"	""	"170.8"	""	"182.1"	""	"183.7"	""	"197.0"	"230.8"	""	"953"	"59"	"36.000"	"29.000"	"5.79512629307995E-05"	""	"0"	"2.767E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNQIGTVNDR"	"[R].tNQIGTVNDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"673.86444"	"1346.72161"	"1346.72256"	"-0.71"	"-0.00048"	"8/104"	"8"	"104"	"2483768.67199707"	"HCD"	"MS2"	"0"	"121.1"	"100.000"	"29.9692"	"7193"	"7193"	"7165"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"248.1"	""	"161.5"	""	"154.1"	""	"189.1"	"1.3"	"176.2"	"213.3"	""	"951"	"56"	"36.000"	"29.000"	"0.000110192115606001"	""	"0"	"6.202E-05"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAFPGDVDR"	"[R].vAAAFPGDVDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"673.86609"	"1346.72490"	"1346.72658"	"-1.25"	"-0.00084"	"15/84"	"15"	"84"	"2619982.15081787"	"HCD"	"MS2"	"0"	"109.1"	"100.000"	"63.8736"	"20937"	"20937"	"20919"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"166.7"	""	"118.9"	""	"123.7"	""	"121.6"	""	"124.1"	"381.3"	""	"966"	"49"	"36.000"	"29.000"	"0.000613687292815725"	"26"	"0"	"0.0001957"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAFPGDVDR"	"[R].vAAAFPGDVDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"673.86621"	"1346.72515"	"1346.72658"	"-1.07"	"-0.00072"	"9/84"	"9"	"84"	"2540245.42779541"	"HCD"	"MS2"	"0"	"109.9"	"100.000"	"63.8328"	"20935"	"20935"	"20917"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"152.6"	""	"114.1"	""	"117.1"	""	"119.0"	""	"148.4"	"393.8"	""	"966"	"44"	"36.000"	"29.000"	"0.00194064961640038"	"26"	"0"	"0.0002722"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAFPGDVDR"	"[R].vAAAFPGDVDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"673.86633"	"1346.72539"	"1346.72658"	"-0.88"	"-0.00060"	"8/84"	"8"	"84"	"652548.64263916"	"HCD"	"MS2"	"4.457425"	"33.6"	"100.000"	"64.2052"	"21072"	"21072"	"21054"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.6"	""	"36.5"	""	"44.3"	""	"44.3"	"0.2"	"45.6"	"98.2"	""	"944"	"32"	"36.000"	"29.000"	"0.0323550442885656"	"21"	"0"	"0.003313"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAFPGDVDR"	"[R].vAAAFPGDVDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"673.86652"	"1346.72576"	"1346.72658"	"-0.61"	"-0.00041"	"7/84"	"7"	"84"	"521358.038024902"	"HCD"	"MS2"	"4.998827"	"31.4"	"100.000"	"64.1347"	"21058"	"21058"	"21034"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.8"	""	"37.8"	""	"31.4"	""	"47.0"	"2.7"	"51.1"	"85.4"	""	"961"	"32"	"36.000"	"29.000"	"0.0306685605114559"	"23"	"0"	"0.003348"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAFPGDVDR"	"[R].vAAAFPGDVDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"673.86682"	"1346.72637"	"1346.72658"	"-0.16"	"-0.00011"	"7/84"	"7"	"84"	"938929.834716797"	"HCD"	"MS2"	"11.02841"	"48.2"	"100.000"	"63.5149"	"20806"	"20806"	"20779"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.0"	""	"52.9"	""	"61.4"	""	"48.5"	""	"68.8"	"151.8"	""	"961"	"44"	"36.000"	"29.000"	"0.00199845048342378"	"26"	"0"	"0.001622"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAFPGDVDR"	"[R].vAAAFPGDVDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"673.86737"	"1346.72746"	"1346.72658"	"0.66"	"0.00044"	"7/84"	"7"	"84"	"642526.807556152"	"HCD"	"MS2"	"15.55824"	"40.2"	"100.000"	"63.5878"	"20821"	"20821"	"20795"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.7"	""	"52.1"	""	"54.2"	""	"46.9"	""	"60.1"	"103.5"	""	"951"	"42"	"36.000"	"29.000"	"0.0033124590745967"	"24"	"0"	"0.001077"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLEELSLAQT"	"[K].gGLEELSLAQT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51799"	"H(+)/Cl(-) exchange transporter 7 OS=Rattus norvegicus OX=10116 GN=Clcn7 PE=2 SV=1"	"P51799"	"H(+)/Cl(-) exchange transporter 7 OS=Rattus norvegicus OX=10116 GN=Clcn7 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.87048"	"1346.73369"	"1346.73648"	"-2.07"	"-0.00139"	"4/94"	"4"	"94"	"107415.311889648"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"97.4154"	"34168"	"34168"	"34162"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.2"	""	"2.2"	""	"5.9"	""	"7.6"	""	"7.9"	"10.4"	""	"999"	"10"	"36.000"	"29.000"	"4.59764561090709"	"13"	"0.008478"	"0.1024"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLEELSLAQT"	"[K].gGLEELSLAQT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51799"	"H(+)/Cl(-) exchange transporter 7 OS=Rattus norvegicus OX=10116 GN=Clcn7 PE=2 SV=1"	"P51799"	"H(+)/Cl(-) exchange transporter 7 OS=Rattus norvegicus OX=10116 GN=Clcn7 PE=2 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"3"	"673.87158"	"1346.73589"	"1346.73648"	"-0.44"	"-0.00029"	"4/94"	"4"	"94"	"144681.431091309"	"HCD"	"MS2"	"13.58996"	"3.3"	"100.000"	"97.4558"	"34159"	"34159"	"34153"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.3"	""	"5.6"	""	"3.9"	""	"8.5"	""	"5.1"	"4.5"	""	"1003"	"18"	"37.000"	"30.000"	"0.84386104162684"	"19"	"0.003967"	"0.04101"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTAVSIDGAER"	"[K].vTAVSIDGAER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P752"	"Torsin-1A-interacting protein 2 OS=Rattus norvegicus OX=10116 GN=Tor1aip2 PE=2 SV=1"	"Q6P752"	"Torsin-1A-interacting protein 2 OS=Rattus norvegicus OX=10116 GN=Tor1aip2 PE=2 SV=1"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"673.87738"	"1346.74748"	"1346.74771"	"-0.17"	"-0.00011"	"9/96"	"9"	"96"	"631655.666748047"	"HCD"	"MS2"	"0"	"40.1"	"100.000"	"53.9822"	"16951"	"16951"	"16928"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.6"	""	"47.4"	""	"50.6"	""	"66.3"	"1.2"	"86.4"	"79.4"	""	"1046"	"58"	"37.000"	"30.000"	"7.71794516903292E-05"	"23"	"0"	"5.713E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGEGAVSLVER"	"[R].tGEGAVSLVER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"A1L1K3"	"Anaphase-promoting complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Anapc5 PE=2 SV=1"	"A1L1K3"	"Anaphase-promoting complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Anapc5 PE=2 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"673.87903"	"1346.75078"	"1346.74771"	"2.28"	"0.00154"	"9/98"	"9"	"98"	"663923.556945801"	"HCD"	"MS2"	"53.35949"	"43.2"	"100.000"	"51.5404"	"15965"	"15965"	"15941"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.6"	""	"63.7"	""	"56.9"	""	"65.8"	""	"77.0"	"86.8"	""	"1001"	"30"	"36.000"	"30.000"	"0.0512158142636517"	"18"	"0"	"0.000752"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEIDNGK"	"[R].lVEIDnGk.[Q]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"673.89935"	"1346.79143"	"1346.79315"	"-1.28"	"-0.00086"	"12/64"	"12"	"64"	"827328.061340332"	"HCD"	"MS2"	"17.47237"	"64.7"	"100.000"	"69.4757"	"23229"	"23229"	"23208"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.1"	""	"53.3"	""	"40.4"	""	"122.4"	""	"167.2"	"190.0"	""	"867"	"38"	"36.000"	"29.000"	"0.00687051198931892"	"18"	"0"	"0.002607"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEIDNGK"	"[R].lVEIDnGk.[Q]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"673.89948"	"1346.79167"	"1346.79315"	"-1.10"	"-0.00074"	"11/64"	"11"	"64"	"532577.740783691"	"HCD"	"MS2"	"41.27958"	"43.0"	"100.000"	"70.9115"	"23800"	"23800"	"23781"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.6"	""	"38.5"	""	"43.3"	""	"61.7"	""	"106.1"	"127.6"	""	"865"	"19"	"36.000"	"29.000"	"0.500018544748083"	"17"	"0.0007829"	"0.009446"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEELQQK"	"[K].lEELqQk.[V]"	"N-Term(TMT6plex); Q5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"0"	"2"	"2"	"0.4138"	"0.0000"	"1"	"1"	"5"	"673.89978"	"1346.79228"	"1346.79315"	"-0.65"	"-0.00043"	"6/54"	"6"	"54"	"404742.363220215"	"HCD"	"MS2"	"14.73247"	"37.1"	"100.000"	"68.6809"	"22905"	"22905"	"22879"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.5"	""	"47.2"	""	"51.2"	""	"56.8"	"2.1"	"62.1"	"65.6"	""	"860"	"29"	"36.000"	"29.000"	"0.0499422903951348"	""	"0.002056"	"0.02267"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEIDNGK"	"[R].lVEIDnGk.[Q]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.89978"	"1346.79228"	"1346.79315"	"-0.65"	"-0.00043"	"7/64"	"7"	"64"	"542142.328369141"	"HCD"	"MS2"	"0"	"44.1"	"100.000"	"70.8016"	"23769"	"23769"	"23748"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.6"	""	"34.3"	""	"27.0"	""	"74.8"	""	"109.7"	"146.7"	""	"860"	"33"	"36.000"	"29.000"	"0.0194298056081217"	"15"	"0.0002479"	"0.00599"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGDVIELK"	"[K].nGDVIELk.[Y]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"0"	"2"	"2"	"0.4194"	"0.0000"	"1"	"1"	"1"	"673.89990"	"1346.79253"	"1346.79315"	"-0.46"	"-0.00031"	"12/76"	"12"	"76"	"297736.212890625"	"HCD"	"MS2"	"0"	"26.2"	"100.000"	"74.8613"	"25419"	"25419"	"25398"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.7"	""	"31.0"	""	"39.3"	""	"39.2"	""	"53.1"	"45.9"	""	"859"	"31"	"36.000"	"29.000"	"0.0318392748638744"	""	"0.002973"	"0.03018"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEELQQK"	"[K].lEELqQk.[V]"	"N-Term(TMT6plex); Q5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"0"	"2"	"2"	"0.2353"	"0.0000"	"1"	"1"	"3"	"673.89990"	"1346.79253"	"1346.79315"	"-0.46"	"-0.00031"	"6/54"	"6"	"54"	"378760.656677246"	"HCD"	"MS2"	"10.77227"	"33.9"	"100.000"	"68.8114"	"22944"	"22944"	"22917"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.5"	""	"47.1"	""	"44.5"	""	"53.3"	"0.8"	"60.6"	"58.1"	""	"859"	"17"	"36.000"	"29.000"	"0.868886737242317"	"26"	"0.006685"	"0.07481"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEIDNGK"	"[R].lVEIDnGk.[Q]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"673.89990"	"1346.79253"	"1346.79315"	"-0.46"	"-0.00031"	"12/64"	"12"	"64"	"778930.064086914"	"HCD"	"MS2"	"21.49927"	"56.1"	"100.000"	"69.6203"	"23274"	"23274"	"23251"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.3"	""	"44.4"	""	"28.1"	""	"105.4"	"1.6"	"146.9"	"169.8"	""	"859"	"36"	"36.000"	"29.000"	"0.0114541579641197"	"18"	"0"	"0.003303"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGDVIELK"	"[K].nGDVIELk.[Y]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"0"	"2"	"2"	"0.4848"	"0.0000"	"1"	"1"	"1"	"673.90112"	"1346.79497"	"1346.79315"	"1.35"	"0.00091"	"6/76"	"6"	"76"	"307514.72064209"	"HCD"	"MS2"	"12.50724"	"27.5"	"100.000"	"75.0242"	"25468"	"25468"	"25441"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.7"	""	"37.0"	""	"31.5"	""	"44.7"	"0.9"	"51.7"	"47.3"	""	"842"	"33"	"36.000"	"29.000"	"0.0229235616846659"	""	"0.004069"	"0.04379"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQTANEVK"	"[K].vQTANEVk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"673.90546"	"1346.80364"	"1346.80439"	"-0.56"	"-0.00037"	"7/74"	"7"	"74"	"1021647.39324951"	"HCD"	"MS2"	"0"	"77.7"	"100.000"	"37.3241"	"10179"	"10179"	"10157"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"113.3"	""	"93.4"	""	"106.0"	""	"124.1"	""	"147.5"	"153.6"	""	"871"	"21"	"36.000"	"29.000"	"0.350742311142193"	"26"	"0.001211"	"0.01454"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQTANEVK"	"[K].vQTANEVk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"673.90662"	"1346.80596"	"1346.80439"	"1.17"	"0.00078"	"7/74"	"7"	"74"	"1031993.1114502"	"HCD"	"MS2"	"39.18105"	"74.1"	"100.000"	"37.1622"	"10119"	"10119"	"10090"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"110.4"	""	"91.6"	""	"105.3"	""	"120.9"	"0.5"	"142.6"	"131.0"	""	"847"	"15"	"36.000"	"29.000"	"1.23268869950121"	"22"	"0.001374"	"0.01633"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSMSAYEMR"	"[K].sGSMSAYEMR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"674.31458"	"1347.62187"	"1347.62344"	"-1.16"	"-0.00078"	"9/86"	"9"	"86"	"2298955.18518066"	"HCD"	"MS2"	"42.54666"	"149.4"	"100.000"	"43.5052"	"12688"	"12688"	"12666"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"259.6"	""	"195.4"	""	"225.8"	""	"195.9"	""	"252.2"	"285.0"	""	"240"	"30"	"30.000"	"23.000"	"0.0129473606667579"	"18"	"0"	"6.584E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSMSAYEMR"	"[K].sGSMSAYEMR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"674.31476"	"1347.62224"	"1347.62344"	"-0.89"	"-0.00060"	"9/86"	"9"	"86"	"2426871.88555908"	"HCD"	"MS2"	"56.32109"	"158.2"	"100.000"	"43.3003"	"12615"	"12615"	"12591"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"269.7"	""	"217.8"	""	"227.1"	""	"226.7"	"1.4"	"268.3"	"285.8"	""	"241"	"24"	"30.000"	"23.000"	"0.0460242846362256"	"21"	"0"	"0.0002298"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSYNTEWR"	"[K].ySYNTEWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"674.32996"	"1347.65264"	"1347.65308"	"-0.33"	"-0.00022"	"6/72"	"6"	"72"	"1295209.45092773"	"HCD"	"MS2"	"19.54212"	"91.8"	"100.000"	"56.5892"	"18008"	"18008"	"17988"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"133.6"	""	"96.6"	""	"126.0"	""	"142.9"	"4.1"	"182.3"	"185.2"	""	"394"	"15"	"32.000"	"25.000"	"0.644861168911311"	"25"	"0.0008629"	"0.01005"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPVAENFR"	"[K].nGNPVAENFR.[V]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"0"	"2"	"2"	"0.3704"	"0.0000"	"1"	"1"	"1"	"674.34601"	"1347.68474"	"1347.68544"	"-0.52"	"-0.00035"	"8/90"	"8"	"90"	"1139250.37384033"	"HCD"	"MS2"	"25.51667"	"62.8"	"100.000"	"49.7378"	"15231"	"15231"	"15206"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.2"	""	"70.7"	""	"82.3"	""	"106.8"	"1.9"	"116.1"	"126.6"	""	"656"	"27"	"35.000"	"28.000"	"0.0648446041956691"	"17"	"0"	"0.001041"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPVAENFR"	"[K].nGNPVAENFR.[V]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"0"	"2"	"2"	"0.3514"	"0.0000"	"1"	"1"	"1"	"674.34735"	"1347.68743"	"1347.68544"	"1.47"	"0.00099"	"9/90"	"9"	"90"	"903747.961914063"	"HCD"	"MS2"	"25.93783"	"53.6"	"100.000"	"50.0610"	"15351"	"15351"	"15326"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.1"	""	"60.0"	""	"68.1"	""	"82.7"	"4.8"	"105.3"	"109.5"	""	"669"	"37"	"35.000"	"28.000"	"0.00721765504861567"	"20"	"0"	"6.622E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDPEVFQR"	"[K].dLDPEVFQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"674.35870"	"1347.71013"	"1347.71060"	"-0.35"	"-0.00023"	"5/74"	"5"	"74"	"333305.759277344"	"HCD"	"MS2"	"12.33221"	"21.3"	"100.000"	"74.6114"	"25305"	"25305"	"25285"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.4"	""	"19.3"	""	"25.5"	""	"41.4"	""	"44.8"	"46.7"	""	"883"	"23"	"36.000"	"29.000"	"0.234385482127981"	"27"	"0.008668"	"0.1084"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDPEVFQR"	"[K].dLDPEVFQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"674.35883"	"1347.71037"	"1347.71060"	"-0.16"	"-0.00011"	"6/74"	"6"	"74"	"405753.639465332"	"HCD"	"MS2"	"11.11344"	"24.4"	"100.000"	"74.4322"	"25246"	"25246"	"25228"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.4"	""	"30.0"	""	"22.6"	""	"47.5"	""	"42.9"	"54.1"	""	"891"	"45"	"36.000"	"29.000"	"0.00152001442127569"	"27"	"0"	"0.001375"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LESEGDSLLR"	"[R].lESEGDSLLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"674.36829"	"1347.72930"	"1347.73173"	"-1.80"	"-0.00121"	"7/82"	"7"	"82"	"303319.938964844"	"HCD"	"MS2"	"21.56914"	"23.8"	"100.000"	"68.2036"	"22710"	"22710"	"22687"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.5"	""	"34.6"	""	"35.5"	""	"42.0"	""	"42.4"	"44.3"	""	"928"	"35"	"36.000"	"29.000"	"0.0158678461326361"	"17"	"0.003507"	"0.03595"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LESEGDSLLR"	"[R].lESEGDSLLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.8393"	"0.0000"	"1"	"1"	"1"	"674.36896"	"1347.73064"	"1347.73173"	"-0.81"	"-0.00054"	"8/82"	"8"	"82"	"763499.897705078"	"HCD"	"MS2"	"9.147716"	"41.3"	"100.000"	"67.5947"	"22463"	"22463"	"22440"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.6"	""	"43.7"	""	"55.3"	""	"73.5"	""	"70.2"	"84.3"	""	"937"	"56"	"36.000"	"29.000"	"0.00013113227482487"	"25"	"0"	"0.0001387"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LESEGDSLLR"	"[R].lESEGDSLLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"674.36908"	"1347.73088"	"1347.73173"	"-0.63"	"-0.00042"	"5/82"	"5"	"82"	"306463.30456543"	"HCD"	"MS2"	"25.07549"	"24.8"	"100.000"	"68.3456"	"22754"	"22754"	"22726"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.0"	""	"26.9"	""	"32.4"	""	"48.6"	""	"46.3"	"52.9"	""	"940"	"17"	"36.000"	"29.000"	"0.918539544214435"	"20"	"0.008728"	"0.112"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LESEGDSLLR"	"[R].lESEGDSLLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"674.36908"	"1347.73088"	"1347.73173"	"-0.63"	"-0.00042"	"9/82"	"9"	"82"	"2453202.58782959"	"HCD"	"MS2"	"0.9009829"	"111.5"	"100.000"	"67.8852"	"22580"	"22580"	"22562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"178.2"	""	"128.5"	""	"157.8"	""	"185.5"	"2.4"	"199.3"	"204.0"	""	"940"	"62"	"36.000"	"29.000"	"3.06265345208596E-05"	"25"	"0"	"4.253E-05"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LESEGDSLLR"	"[R].lESEGDSLLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"674.36914"	"1347.73100"	"1347.73173"	"-0.53"	"-0.00036"	"8/82"	"8"	"82"	"744673.264282227"	"HCD"	"MS2"	"5.316691"	"41.3"	"100.000"	"67.7232"	"22500"	"22500"	"22478"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.9"	""	"48.6"	""	"47.3"	""	"74.3"	""	"73.6"	"82.3"	""	"933"	"54"	"36.000"	"29.000"	"0.000171337193182356"	"22"	"0"	"0.0001184"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTLSDDLER"	"[K].gLTLSDDLER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"2"	"2"	"0.7581"	"0.0000"	"1"	"1"	"1"	"674.36914"	"1347.73100"	"1347.73173"	"-0.53"	"-0.00036"	"15/84"	"15"	"84"	"1441307.38415527"	"HCD"	"MS2"	"15.81113"	"82.6"	"100.000"	"70.9924"	"23847"	"23847"	"23825"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"119.0"	""	"100.8"	""	"98.1"	""	"141.7"	""	"163.7"	"160.9"	""	"933"	"62"	"36.000"	"29.000"	"2.69681806114767E-05"	""	"0"	"3.228E-05"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTLSDDLER"	"[K].gLTLSDDLER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"674.36914"	"1347.73100"	"1347.73173"	"-0.53"	"-0.00036"	"8/84"	"8"	"84"	"1235379.67889404"	"HCD"	"MS2"	"17.43362"	"60.4"	"100.000"	"71.4407"	"24016"	"24016"	"24000"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"94.0"	""	"73.2"	""	"74.6"	""	"94.1"	""	"124.0"	"117.6"	""	"933"	"39"	"36.000"	"29.000"	"0.00572600401335397"	"25"	"0"	"0.0001552"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LESEGDSLLR"	"[R].lESEGDSLLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.8393"	"0.0000"	"1"	"1"	"1"	"674.36914"	"1347.73100"	"1347.73173"	"-0.53"	"-0.00036"	"8/82"	"8"	"82"	"2513112.21917725"	"HCD"	"MS2"	"0"	"113.1"	"100.000"	"68.0113"	"22617"	"22617"	"22599"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"186.8"	""	"130.8"	""	"145.6"	""	"192.2"	""	"206.1"	"211.6"	""	"933"	"56"	"36.000"	"29.000"	"0.000115571738988593"	"25"	"0"	"2.838E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTLSDDLER"	"[K].gLTLSDDLER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"674.36926"	"1347.73125"	"1347.73173"	"-0.35"	"-0.00024"	"15/84"	"15"	"84"	"998621.741943359"	"HCD"	"MS2"	"33.79179"	"59.8"	"100.000"	"71.0705"	"23865"	"23865"	"23845"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.0"	""	"71.2"	""	"76.0"	""	"85.3"	""	"124.4"	"141.3"	""	"931"	"43"	"36.000"	"29.000"	"0.00208890979013873"	"23"	"0"	"0.0004953"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADEVAEGK"	"[K].aADEVAEGk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"1"	"674.37720"	"1347.74712"	"1347.75202"	"-3.63"	"-0.00245"	"10/72"	"10"	"72"	"751149.373596191"	"HCD"	"MS2"	"29.9298"	"60.0"	"100.000"	"37.8672"	"10394"	"10394"	"10376"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"101.1"	""	"70.6"	""	"70.5"	""	"98.8"	""	"109.9"	"118.6"	""	"949"	"27"	"36.000"	"29.000"	"0.101680159023147"	""	"0"	"0.002707"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADEVAEGK"	"[K].aADEVAEGk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"674.37878"	"1347.75029"	"1347.75202"	"-1.28"	"-0.00086"	"8/72"	"8"	"72"	"897829.868774414"	"HCD"	"MS2"	"0"	"72.2"	"100.000"	"37.6710"	"10321"	"10321"	"10305"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"129.8"	""	"88.3"	""	"85.4"	""	"116.6"	""	"128.6"	"140.4"	""	"942"	"44"	"36.000"	"29.000"	"0.00189243471909851"	""	"0"	"0.0005415"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADEVAEGK"	"[K].aADEVAEGk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"2"	"2"	"0.4528"	"0.0000"	"1"	"1"	"1"	"674.37903"	"1347.75078"	"1347.75202"	"-0.92"	"-0.00062"	"14/72"	"14"	"72"	"1534026.44525146"	"HCD"	"MS2"	"3.936436"	"121.8"	"100.000"	"38.0338"	"10468"	"10468"	"10446"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"220.2"	""	"148.5"	""	"165.2"	""	"179.3"	"0.3"	"207.5"	"232.0"	""	"940"	"53"	"36.000"	"29.000"	"0.000254154531784423"	""	"0"	"0.000194"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGPAEATEK"	"[R].sGPAEATEk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4TU93"	"C-type mannose receptor 2 OS=Rattus norvegicus OX=10116 GN=Mrc2 PE=1 SV=1"	"Q4TU93"	"C-type mannose receptor 2 OS=Rattus norvegicus OX=10116 GN=Mrc2 PE=1 SV=1"	"0"	"2"	"2"	"0.2353"	"0.0000"	"1"	"1"	"1"	"674.37946"	"1347.75163"	"1347.75202"	"-0.28"	"-0.00019"	"8/78"	"8"	"78"	"1253531.12872314"	"HCD"	"MS2"	"63.6618"	"79.8"	"100.000"	"28.9841"	"6792"	"6792"	"6763"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"117.6"	""	"100.2"	""	"92.2"	""	"131.7"	""	"170.3"	"150.2"	""	"946"	"17"	"36.000"	"29.000"	"0.92866941094345"	"27"	"0.000936"	"0.01202"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADEVAEGK"	"[K].aADEVAEGk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"2"	"2"	"0.4082"	"0.0000"	"1"	"1"	"1"	"674.37982"	"1347.75237"	"1347.75202"	"0.26"	"0.00018"	"14/72"	"14"	"72"	"2847299.14300537"	"HCD"	"MS2"	"0"	"210.4"	"100.000"	"38.1749"	"10518"	"10518"	"10501"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"365.2"	""	"257.4"	""	"278.1"	""	"320.8"	""	"365.5"	"404.9"	""	"914"	"49"	"36.000"	"29.000"	"0.000591447499542644"	""	"0"	"0.0004275"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVQSEEK"	"[R].gIVQSEEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62824"	"Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1"	"Q62824"	"Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"674.39709"	"1347.78691"	"1347.78840"	"-1.10"	"-0.00074"	"7/68"	"7"	"68"	"813002.335571289"	"HCD"	"MS2"	"22.1869"	"67.2"	"100.000"	"39.8324"	"11193"	"11193"	"11165"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.1"	""	"89.4"	""	"91.7"	""	"112.5"	""	"120.8"	"119.8"	""	"933"	"21"	"36.000"	"29.000"	"0.378313333488817"	"19"	"0.0008629"	"0.01118"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQNDLTK"	"[K].gIQnDLTk.[L]"	"N-Term(TMT6plex); N4(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.2439"	"0.0000"	"1"	"1"	"1"	"674.39709"	"1347.78691"	"1347.78840"	"-1.10"	"-0.00074"	"7/70"	"7"	"70"	"989841.794677734"	"HCD"	"MS2"	"0"	"86.9"	"100.000"	"52.7479"	"16458"	"16458"	"16434"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"100.8"	""	"90.0"	""	"86.8"	""	"160.2"	""	"188.1"	"201.5"	""	"933"	"41"	"36.000"	"29.000"	"0.00388912272625059"	"24"	"0.0001301"	"0.004622"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVSVEEAK"	"[R].qVSVEEAk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63322"	"Ras-related protein Ral-A OS=Rattus norvegicus OX=10116 GN=Rala PE=1 SV=1"	"P63322"	"Ras-related protein Ral-A OS=Rattus norvegicus OX=10116 GN=Rala PE=1 SV=1"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"674.39709"	"1347.78691"	"1347.78840"	"-1.10"	"-0.00074"	"14/76"	"14"	"76"	"2060165.2177124"	"HCD"	"MS2"	"9.659118"	"157.2"	"100.000"	"42.3992"	"12236"	"12236"	"12217"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"186.6"	""	"178.1"	""	"168.6"	""	"270.9"	""	"351.1"	"342.4"	""	"933"	"49"	"36.000"	"29.000"	"0.000575243404701285"	"26"	"0"	"0.002801"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVSVEEAK"	"[R].qVSVEEAk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63322"	"Ras-related protein Ral-A OS=Rattus norvegicus OX=10116 GN=Rala PE=1 SV=1"	"P63322"	"Ras-related protein Ral-A OS=Rattus norvegicus OX=10116 GN=Rala PE=1 SV=1"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"674.39709"	"1347.78691"	"1347.78840"	"-1.10"	"-0.00074"	"14/76"	"14"	"76"	"2162922.8805542"	"HCD"	"MS2"	"0"	"165.7"	"100.000"	"42.2816"	"12199"	"12199"	"12172"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"196.7"	""	"184.8"	""	"178.2"	""	"282.6"	""	"364.3"	"370.9"	""	"933"	"49"	"36.000"	"29.000"	"0.000571283456957145"	"26"	"0"	"0.003221"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATEALGEK"	"[K].aATEALGEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"0"	"2"	"2"	"0.3793"	"0.0000"	"1"	"1"	"1"	"674.39758"	"1347.78789"	"1347.78840"	"-0.38"	"-0.00026"	"8/74"	"8"	"74"	"789564.940612793"	"HCD"	"MS2"	"0"	"67.8"	"100.000"	"46.5151"	"13907"	"13907"	"13884"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.1"	""	"88.4"	""	"88.3"	""	"104.5"	"1.5"	"118.4"	"137.8"	""	"930"	"29"	"36.000"	"29.000"	"0.0633071777346667"	""	"0"	"0.002816"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISQDADLK"	"[K].iSQDADLk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.0526"	"0.0000"	"1"	"1"	"1"	"674.39764"	"1347.78801"	"1347.78840"	"-0.29"	"-0.00020"	"11/74"	"11"	"74"	"1106045.30102539"	"HCD"	"MS2"	"46.17892"	"86.5"	"100.000"	"53.6393"	"16811"	"16811"	"16785"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"132.1"	""	"94.0"	""	"110.7"	""	"133.2"	""	"193.2"	"163.9"	""	"955"	"19"	"36.000"	"29.000"	"0.668302946528425"	"22"	"0.0006732"	"0.009216"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQNDLTK"	"[K].gIQnDLTk.[L]"	"N-Term(TMT6plex); N4(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.2812"	"0.0000"	"1"	"1"	"1"	"674.39771"	"1347.78813"	"1347.78840"	"-0.20"	"-0.00013"	"6/70"	"6"	"70"	"665774.935180664"	"HCD"	"MS2"	"42.45355"	"61.2"	"100.000"	"57.8164"	"18508"	"18508"	"18482"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"82.0"	""	"63.7"	""	"62.2"	""	"103.8"	"1.2"	"130.6"	"138.3"	""	"955"	"32"	"36.000"	"29.000"	"0.0272253440014057"	"27"	"0.0003538"	"0.006942"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQNDLTK"	"[K].gIQnDLTk.[L]"	"N-Term(TMT6plex); N4(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.3191"	"0.0000"	"1"	"1"	"1"	"674.39832"	"1347.78935"	"1347.78840"	"0.71"	"0.00048"	"7/70"	"7"	"70"	"668519.198791504"	"HCD"	"MS2"	"35.02107"	"65.2"	"100.000"	"57.6278"	"18446"	"18446"	"18421"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"82.0"	""	"81.8"	""	"77.5"	""	"111.4"	""	"123.1"	"144.3"	""	"940"	"47"	"36.000"	"29.000"	"0.00101413987230175"	"29"	"0"	"0.001865"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNNAGLNSEK"	"[-].mNNAGLNSEk.[V]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"674.83929"	"1348.67131"	"1348.67283"	"-1.13"	"-0.00076"	"7/90"	"7"	"90"	"533229.37310791"	"HCD"	"MS2"	"0"	"32.7"	"100.000"	"54.1220"	"17019"	"17019"	"17002"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.2"	""	"40.8"	""	"45.2"	""	"38.6"	""	"68.5"	"67.5"	""	"569"	"49"	"34.000"	"27.000"	"0.000339689615720086"	"20"	"0"	"0.001241"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNNAGLNSEK"	"[-].mNNAGLNSEk.[V]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"674.83960"	"1348.67192"	"1348.67283"	"-0.67"	"-0.00045"	"7/90"	"7"	"90"	"325698.584411621"	"HCD"	"MS2"	"9.392498"	"25.9"	"100.000"	"54.4343"	"17132"	"17132"	"17104"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.4"	""	"31.0"	""	"34.3"	""	"36.0"	""	"50.8"	"48.0"	""	"570"	"45"	"34.000"	"27.000"	"0.000897108269518875"	"20"	"0.0002479"	"0.00546"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNNAGLNSEK"	"[-].mNNAGLNSEk.[V]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"674.83966"	"1348.67204"	"1348.67283"	"-0.58"	"-0.00039"	"8/90"	"8"	"90"	"1447531.14398193"	"HCD"	"MS2"	"9.087203"	"71.6"	"100.000"	"54.0558"	"16981"	"16981"	"16960"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"119.6"	""	"104.9"	""	"102.9"	""	"87.3"	""	"126.6"	"136.8"	""	"570"	"57"	"34.000"	"27.000"	"6.07917800246774E-05"	""	"0"	"0.0004059"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNNAGLNSEK"	"[-].mNNAGLNSEk.[V]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"674.83978"	"1348.67229"	"1348.67283"	"-0.40"	"-0.00027"	"8/90"	"8"	"90"	"1561044.84063721"	"HCD"	"MS2"	"10.12127"	"74.3"	"100.000"	"53.8209"	"16896"	"16896"	"16876"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"122.6"	""	"109.3"	""	"100.5"	""	"76.7"	""	"139.0"	"157.0"	""	"566"	"55"	"34.000"	"27.000"	"8.5464633687377E-05"	"27"	"0"	"0.0008862"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLNPEFNER"	"[R].tLNPEFNER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"674.85553"	"1348.70378"	"1348.70585"	"-1.53"	"-0.00103"	"6/90"	"6"	"90"	"3009784.50811768"	"HCD"	"MS2"	"38.11969"	"178.3"	"100.000"	"50.6698"	"15610"	"15610"	"15588"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"226.6"	""	"175.8"	""	"196.2"	""	"341.9"	"8.9"	"391.1"	"353.5"	""	"717"	"29"	"35.000"	"28.000"	"0.044513235227188"	"23"	"0"	"0.001929"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLNPEFNER"	"[R].tLNPEFNER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"674.85583"	"1348.70439"	"1348.70585"	"-1.08"	"-0.00073"	"6/90"	"6"	"90"	"1615380.27929688"	"HCD"	"MS2"	"3.555848"	"100.8"	"100.000"	"51.3403"	"15872"	"15872"	"15854"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"126.7"	""	"109.0"	""	"125.7"	""	"179.4"	""	"204.4"	"213.0"	""	"737"	"29"	"35.000"	"28.000"	"0.0461782522965912"	"19"	"0"	"0.001219"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADFQGISPER"	"[K].aDFQGISPER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"674.85596"	"1348.70464"	"1348.70585"	"-0.90"	"-0.00060"	"8/98"	"8"	"98"	"1832311.55633545"	"HCD"	"MS2"	"25.26935"	"107.2"	"100.000"	"56.2506"	"17885"	"17885"	"17869"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"126.9"	""	"124.0"	""	"123.7"	""	"202.9"	""	"216.4"	"232.3"	""	"721"	"32"	"35.000"	"28.000"	"0.0221261202861908"	"17"	"0"	"0.002092"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADFQGISPER"	"[K].aDFQGISPER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"674.85632"	"1348.70537"	"1348.70585"	"-0.35"	"-0.00024"	"14/98"	"14"	"98"	"1708396.79614258"	"HCD"	"MS2"	"31.93489"	"109.5"	"100.000"	"56.4713"	"17960"	"17960"	"17943"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"145.1"	""	"133.2"	""	"119.8"	""	"184.9"	""	"236.5"	"228.9"	""	"728"	"27"	"35.000"	"28.000"	"0.0774642612737707"	"16"	"0.0002479"	"0.006035"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLNPEFNER"	"[R].tLNPEFNER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"674.85638"	"1348.70549"	"1348.70585"	"-0.26"	"-0.00018"	"6/90"	"6"	"90"	"2492291.17675781"	"HCD"	"MS2"	"3.213943"	"136.1"	"100.000"	"50.9554"	"15727"	"15727"	"15712"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"171.7"	""	"142.5"	""	"169.7"	""	"243.0"	""	"288.9"	"277.3"	""	"733"	"29"	"35.000"	"28.000"	"0.0467814823429357"	"26"	"0"	"0.002024"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADFQGISPER"	"[K].aDFQGISPER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"674.85669"	"1348.70610"	"1348.70585"	"0.19"	"0.00013"	"6/98"	"6"	"98"	"927558.26751709"	"HCD"	"MS2"	"0"	"61.5"	"100.000"	"55.9603"	"17766"	"17766"	"17745"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.8"	""	"76.2"	""	"61.8"	""	"104.5"	"0.2"	"138.4"	"124.3"	""	"734"	"37"	"35.000"	"28.000"	"0.00773866531025517"	"17"	"0"	"0.002827"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLNPEFNER"	"[R].tLNPEFNER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"674.85718"	"1348.70708"	"1348.70585"	"0.91"	"0.00062"	"6/90"	"6"	"90"	"3677688.52685547"	"HCD"	"MS2"	"15.82742"	"205.1"	"100.000"	"51.0457"	"15752"	"15752"	"15730"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"285.0"	""	"192.7"	""	"241.6"	""	"370.1"	"7.3"	"428.3"	"422.6"	""	"741"	"31"	"35.000"	"28.000"	"0.0321949839050575"	"26"	"0"	"0.001433"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADFQGISPER"	"[K].aDFQGISPER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"674.85785"	"1348.70842"	"1348.70585"	"1.91"	"0.00129"	"7/98"	"7"	"98"	"1164912.50354004"	"HCD"	"MS2"	"5.452198"	"70.0"	"100.000"	"56.1720"	"17838"	"17838"	"17821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.4"	""	"71.3"	""	"77.7"	""	"137.1"	""	"147.8"	"152.9"	""	"772"	"44"	"35.000"	"28.000"	"0.0017005417731353"	"18"	"0"	"0.001214"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAGAEQAEK"	"[K].sAGAEQAEk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"674.87561"	"1348.74394"	"1348.74727"	"-2.46"	"-0.00166"	"14/84"	"14"	"84"	"1051660.1696167"	"HCD"	"MS2"	"0"	"85.3"	"100.000"	"24.8320"	"5123"	"5123"	"5099"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"109.0"	""	"78.7"	""	"80.5"	""	"188.3"	"0.2"	"189.1"	"165.0"	""	"951"	"52"	"36.000"	"29.000"	"0.000287839585945486"	"29"	"0"	"0.0003647"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAGAEQAEK"	"[K].sAGAEQAEk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"674.87701"	"1348.74675"	"1348.74727"	"-0.38"	"-0.00026"	"8/84"	"8"	"84"	"273362.377990723"	"HCD"	"MS2"	"29.69834"	"23.1"	"100.000"	"25.1830"	"5263"	"5263"	"5238"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.9"	""	"24.7"	""	"19.3"	""	"45.0"	""	"50.6"	"51.7"	""	"1012"	"43"	"37.000"	"30.000"	"0.00264941820912389"	"22"	"0"	"0.0006377"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAGAEQAEK"	"[K].sAGAEQAEk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"674.87708"	"1348.74687"	"1348.74727"	"-0.29"	"-0.00020"	"14/84"	"14"	"84"	"2581213.73205566"	"HCD"	"MS2"	"0"	"196.8"	"100.000"	"24.9975"	"5174"	"5174"	"5152"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"236.1"	""	"173.6"	""	"205.6"	""	"402.2"	""	"425.9"	"427.7"	""	"1018"	"48"	"37.000"	"30.000"	"0.000838914657286484"	"28"	"0"	"0.0003539"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSLDAVEK"	"[K].qSLDAVEk.[A]"	"N-Term(TMT6plex); Q1(Deamidated); K8(TMT6plex)"	"1"	"1"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"3"	"674.88898"	"1348.77068"	"1348.77242"	"-1.29"	"-0.00087"	"10/80"	"10"	"80"	"1656022.43884277"	"HCD"	"MS2"	"0"	"135.5"	"100.000"	"60.3879"	"19539"	"19539"	"19528"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"193.7"	""	"152.0"	""	"143.6"	""	"232.4"	""	"288.1"	"280.3"	""	"1018"	"20"	"37.000"	"30.000"	"0.498560402573028"	"25"	"0.003507"	"0.03702"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSLDAVEK"	"[K].qSLDAVEk.[A]"	"N-Term(TMT6plex); Q1(Deamidated); K8(TMT6plex)"	"1"	"1"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"3"	"674.88934"	"1348.77141"	"1348.77242"	"-0.75"	"-0.00050"	"10/80"	"10"	"80"	"1708765.44927979"	"HCD"	"MS2"	"0"	"138.9"	"100.000"	"60.6081"	"19613"	"19613"	"19605"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"211.5"	""	"158.5"	""	"158.7"	""	"240.6"	""	"266.6"	"283.2"	""	"1007"	"20"	"37.000"	"30.000"	"0.488651768508104"	"25"	"0.003449"	"0.03506"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSLDAVEK"	"[K].qSLDAVEk.[A]"	"N-Term(TMT6plex); Q1(Deamidated); K8(TMT6plex)"	"1"	"1"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"3"	"674.88940"	"1348.77153"	"1348.77242"	"-0.66"	"-0.00044"	"11/80"	"11"	"80"	"509689.898925781"	"HCD"	"MS2"	"16.94654"	"43.5"	"100.000"	"60.7068"	"19668"	"19668"	"19641"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.3"	""	"50.5"	""	"54.5"	""	"73.6"	""	"85.3"	"81.2"	""	"1007"	"21"	"37.000"	"30.000"	"0.369827732617107"	"25"	"0.006769"	"0.07704"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEIESAVK"	"[K].dEIESAVk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"674.88965"	"1348.77202"	"1348.77242"	"-0.29"	"-0.00020"	"7/64"	"7"	"64"	"3372110.85400391"	"HCD"	"MS2"	"10.77999"	"251.5"	"100.000"	"52.2904"	"16271"	"16271"	"16251"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"384.3"	""	"246.6"	""	"275.3"	""	"480.7"	""	"492.6"	"506.5"	""	"1033"	"39"	"37.000"	"30.000"	"0.00623835845832652"	""	"0.0001301"	"0.004043"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEIESAVK"	"[K].dEIESAVk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.3256"	"0.0000"	"1"	"1"	"1"	"674.88983"	"1348.77239"	"1348.77242"	"-0.02"	"-0.00002"	"7/64"	"7"	"64"	"2577886.61791992"	"HCD"	"MS2"	"15.02922"	"196.6"	"100.000"	"52.5489"	"16365"	"16365"	"16345"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"298.5"	""	"182.1"	""	"213.5"	""	"377.8"	""	"403.6"	"392.5"	""	"1033"	"43"	"37.000"	"30.000"	"0.00264283668056569"	""	"0"	"0.003747"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEEFFTYR"	"[R].eEEFFTYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63514"	"C4b-binding protein alpha chain OS=Rattus norvegicus OX=10116 GN=C4bpa PE=2 SV=1"	"Q63514"	"C4b-binding protein alpha chain OS=Rattus norvegicus OX=10116 GN=C4bpa PE=2 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"675.33203"	"1349.65679"	"1349.65750"	"-0.53"	"-0.00036"	"5/66"	"5"	"66"	"658654.062011719"	"HCD"	"MS2"	"33.63285"	"43.8"	"100.000"	"74.1486"	"25131"	"25131"	"25105"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"72.8"	""	"53.9"	""	"46.7"	""	"92.6"	""	"72.2"	"77.1"	""	"510"	"18"	"34.000"	"27.000"	"0.385070439311858"	"14"	"0.003111"	"0.03113"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEEFFTYR"	"[R].eEEFFTYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63514"	"C4b-binding protein alpha chain OS=Rattus norvegicus OX=10116 GN=C4bpa PE=2 SV=1"	"Q63514"	"C4b-binding protein alpha chain OS=Rattus norvegicus OX=10116 GN=C4bpa PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"675.33209"	"1349.65691"	"1349.65750"	"-0.44"	"-0.00029"	"6/66"	"6"	"66"	"619812.065124512"	"HCD"	"MS2"	"41.47205"	"38.6"	"100.000"	"74.2975"	"25178"	"25178"	"25157"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.7"	""	"49.2"	""	"40.4"	""	"83.4"	""	"70.5"	"70.5"	""	"510"	"14"	"34.000"	"27.000"	"1.11311537221242"	"13"	"0.004069"	"0.04417"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVSEDMLGR"	"[R].tPVSEDmLGR.[V]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"675.34991"	"1349.69255"	"1349.69323"	"-0.50"	"-0.00034"	"7/82"	"7"	"82"	"1326966.14422607"	"HCD"	"MS2"	"0"	"80.0"	"100.000"	"41.1746"	"11738"	"11738"	"11713"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"122.2"	""	"102.1"	""	"107.7"	""	"129.8"	"1.8"	"143.1"	"151.5"	""	"737"	"24"	"35.000"	"28.000"	"0.142704442153616"	"18"	"0.0003538"	"0.006381"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVSEDMLGR"	"[R].tPVSEDmLGR.[V]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"675.35095"	"1349.69463"	"1349.69323"	"1.03"	"0.00070"	"8/82"	"8"	"82"	"1359117.07531738"	"HCD"	"MS2"	"23.193"	"77.7"	"100.000"	"41.0017"	"11677"	"11677"	"11660"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.4"	""	"96.8"	""	"106.4"	""	"138.6"	"2.0"	"134.7"	"143.8"	""	"759"	"21"	"35.000"	"28.000"	"0.289208984304644"	"20"	"0.003189"	"0.03208"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITMQNLNDR"	"[K].iTmQNLNDR.[L]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFV4; Q63279"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"675.35419"	"1349.70110"	"1349.70447"	"-2.50"	"-0.00168"	"8/86"	"8"	"86"	"3424766.57891846"	"HCD"	"MS2"	"31.23865"	"158.3"	"100.000"	"35.8819"	"9593"	"9593"	"9576"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"183.3"	""	"132.0"	""	"194.4"	""	"331.3"	""	"273.1"	"391.8"	""	"812"	"29"	"36.000"	"29.000"	"0.0469381570329992"	"18"	"0.002973"	"0.02868"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITMQNLNDR"	"[K].iTmQNLNDR.[L]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFV4; Q63279"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"675.35596"	"1349.70464"	"1349.70447"	"0.13"	"0.00009"	"8/86"	"8"	"86"	"2928084.09350586"	"HCD"	"MS2"	"8.350658"	"120.0"	"100.000"	"36.1504"	"9701"	"9701"	"9690"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"178.7"	""	"123.7"	""	"187.4"	""	"227.5"	""	"178.7"	"248.2"	""	"860"	"31"	"36.000"	"29.000"	"0.0378851015393446"	"19"	"0.001211"	"0.01469"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITMQNLNDR"	"[K].iTmQNLNDR.[L]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFV4; Q63279"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"675.35614"	"1349.70500"	"1349.70447"	"0.40"	"0.00027"	"8/86"	"8"	"86"	"5404627.65704346"	"HCD"	"MS2"	"12.18914"	"219.2"	"100.000"	"35.8048"	"9566"	"9566"	"9549"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"278.9"	"2.8"	"206.7"	""	"288.7"	""	"482.5"	""	"351.3"	"471.2"	""	"859"	"32"	"36.000"	"29.000"	"0.026300449324579"	"19"	"0"	"0.003622"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPASDQMK"	"[R].dPASDQMk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"675.35956"	"1349.71184"	"1349.71352"	"-1.25"	"-0.00084"	"6/68"	"6"	"68"	"3286479.74353027"	"HCD"	"MS2"	"37.48844"	"256.6"	"100.000"	"36.5874"	"9884"	"9884"	"9864"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"396.0"	""	"228.8"	""	"246.5"	""	"373.6"	"0.7"	"606.1"	"588.9"	""	"865"	"32"	"36.000"	"29.000"	"0.0287730640057253"	"21"	"0.0006732"	"0.008154"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPASDQMK"	"[R].dPASDQMk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"675.35962"	"1349.71196"	"1349.71352"	"-1.16"	"-0.00078"	"7/68"	"7"	"68"	"2199360.17059326"	"HCD"	"MS2"	"14.64752"	"174.1"	"100.000"	"36.8841"	"10005"	"10005"	"9983"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"249.8"	""	"162.8"	""	"184.7"	""	"246.8"	"1.1"	"374.0"	"436.8"	""	"865"	"27"	"36.000"	"29.000"	"0.0872943452292276"	"25"	"0.0023"	"0.02414"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPASDQMK"	"[R].dPASDQMk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"675.36029"	"1349.71330"	"1349.71352"	"-0.16"	"-0.00011"	"6/68"	"6"	"68"	"2308457.43060303"	"HCD"	"MS2"	"12.07163"	"185.5"	"100.000"	"37.0552"	"10069"	"10069"	"10050"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"260.2"	""	"170.3"	""	"188.0"	""	"246.9"	""	"431.0"	"476.0"	""	"849"	"31"	"36.000"	"29.000"	"0.0339529641250483"	"24"	"0.001211"	"0.01477"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPASDQMK"	"[R].dPASDQMk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"675.36047"	"1349.71367"	"1349.71352"	"0.11"	"0.00007"	"6/68"	"6"	"68"	"2702458.04296875"	"HCD"	"MS2"	"41.45351"	"208.9"	"100.000"	"36.7678"	"9952"	"9952"	"9925"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"312.5"	""	"196.8"	""	"202.7"	""	"311.4"	""	"472.4"	"493.0"	""	"847"	"33"	"36.000"	"29.000"	"0.0205046997671866"	"21"	"0.0003538"	"0.006642"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAEEFRDR"	"[K].vVAEEFRDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"1"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"450.58371"	"1349.73658"	"1349.73748"	"-0.67"	"-0.00030"	"5/76"	"5"	"76"	"4769137.51947021"	"HCD"	"MS2"	"28.12894"	"163.9"	"100.000"	"40.9306"	"11648"	"11648"	"11633"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"462.2"	""	"367.1"	""	"259.0"	""	"132.1"	"0.2"	"148.9"	"168.1"	""	"955"	"23"	"36.000"	"29.000"	"0.255254481612054"	"18"	"0.007627"	"0.09329"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSAQEEK"	"[K].sLSAQEEk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"675.38739"	"1349.76750"	"1349.76767"	"-0.12"	"-0.00008"	"14/74"	"14"	"74"	"4197721.37677002"	"HCD"	"MS2"	"20.29417"	"302.6"	"100.000"	"36.2109"	"9732"	"9732"	"9720"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"424.9"	""	"321.3"	""	"340.3"	""	"440.8"	""	"596.7"	"755.4"	""	"886"	"44"	"36.000"	"29.000"	"0.00187242196119662"	"26"	"0.0002479"	"0.005116"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSAQEEK"	"[K].sLSAQEEk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"675.38794"	"1349.76860"	"1349.76767"	"0.69"	"0.00047"	"7/74"	"7"	"74"	"1409172.13470459"	"HCD"	"MS2"	"30.72833"	"123.8"	"100.000"	"36.6873"	"9919"	"9919"	"9896"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"170.1"	""	"117.0"	""	"136.3"	""	"190.8"	""	"275.1"	"290.8"	""	"836"	"13"	"36.000"	"29.000"	"2.15862042355726"	"20"	"0.002973"	"0.02922"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSAQEEK"	"[K].sLSAQEEk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"675.38818"	"1349.76909"	"1349.76767"	"1.06"	"0.00071"	"14/74"	"14"	"74"	"3250115.61230469"	"HCD"	"MS2"	"35.89244"	"236.5"	"100.000"	"36.3477"	"9780"	"9780"	"9766"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"339.0"	""	"251.4"	""	"277.6"	""	"337.2"	""	"456.9"	"589.9"	""	"841"	"45"	"36.000"	"29.000"	"0.00123812929701238"	"27"	"0.0001301"	"0.00436"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDDWWEGR"	"[R].aSDDWWEGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"D4A208"	"SLIT-ROBO Rho GTPase-activating protein 2 OS=Rattus norvegicus OX=10116 GN=Srgap2 PE=1 SV=1"	"D4A208"	"SLIT-ROBO Rho GTPase-activating protein 2 OS=Rattus norvegicus OX=10116 GN=Srgap2 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"675.81689"	"1350.62651"	"1350.62759"	"-0.80"	"-0.00054"	"5/74"	"5"	"74"	"314397.284423828"	"HCD"	"MS2"	"20.35636"	"22.5"	"100.000"	"70.6010"	"23673"	"23673"	"23653"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.8"	""	"19.6"	""	"34.5"	""	"45.0"	""	"40.3"	"46.9"	""	"319"	"10"	"32.000"	"25.000"	"1.42482224655461"	"14"	"0.004069"	"0.04456"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGEGEVSGLMR"	"[R].sGEGEVSGLMR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"675.84729"	"1350.68730"	"1350.68848"	"-0.87"	"-0.00059"	"8/92"	"8"	"92"	"932956.848205566"	"HCD"	"MS2"	"0"	"59.5"	"100.000"	"49.0994"	"14971"	"14971"	"14944"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.2"	""	"72.1"	""	"73.6"	""	"79.7"	"0.4"	"125.4"	"132.4"	""	"748"	"58"	"35.000"	"28.000"	"5.48114892517511E-05"	"19"	"0"	"4.912E-06"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGEGEVSGLMR"	"[R].sGEGEVSGLMR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"675.84747"	"1350.68767"	"1350.68848"	"-0.60"	"-0.00041"	"8/92"	"8"	"92"	"660462.559143066"	"HCD"	"MS2"	"7.520716"	"51.0"	"100.000"	"49.4266"	"15104"	"15104"	"15079"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.1"	""	"52.8"	""	"58.3"	""	"76.7"	""	"156.3"	"87.6"	""	"748"	"23"	"35.000"	"28.000"	"0.172930502003323"	"14"	"0.006769"	"0.07804"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGEGEVSGLMR"	"[R].sGEGEVSGLMR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"675.84766"	"1350.68804"	"1350.68848"	"-0.33"	"-0.00022"	"16/92"	"16"	"92"	"1287814.73461914"	"HCD"	"MS2"	"0"	"81.6"	"100.000"	"49.6278"	"15174"	"15174"	"15153"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"114.9"	""	"96.5"	""	"83.0"	""	"108.2"	"1.2"	"198.1"	"174.3"	""	"751"	"45"	"35.000"	"28.000"	"0.00108046310473324"	"18"	"0"	"2.424E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTEELETLR"	"[K].mTEELETLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"675.85992"	"1350.71257"	"1350.71363"	"-0.79"	"-0.00053"	"14/74"	"14"	"74"	"733968.382873535"	"HCD"	"MS2"	"43.68698"	"32.9"	"100.000"	"72.9838"	"24658"	"24658"	"24637"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.0"	""	"47.6"	""	"49.6"	""	"41.8"	"0.3"	"59.4"	"66.9"	""	"853"	"19"	"36.000"	"29.000"	"0.508064716423676"	"19"	"0"	"0.002477"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTEELETLR"	"[K].mTEELETLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"675.86060"	"1350.71391"	"1350.71363"	"0.21"	"0.00014"	"7/74"	"7"	"74"	"691970.974304199"	"HCD"	"MS2"	"46.52401"	"31.4"	"100.000"	"73.1329"	"24705"	"24705"	"24686"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.0"	""	"45.1"	""	"45.7"	""	"41.0"	""	"58.8"	"57.1"	""	"859"	"17"	"36.000"	"29.000"	"0.841323787270822"	"20"	"0.001374"	"0.01774"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASQMITEGR"	"[K].iASQmITEGR.[M]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"675.86505"	"1350.72283"	"1350.72487"	"-1.51"	"-0.00102"	"14/94"	"14"	"94"	"996713.774719238"	"HCD"	"MS2"	"22.44988"	"71.8"	"100.000"	"39.9818"	"11254"	"11254"	"11225"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"82.9"	""	"97.1"	""	"113.6"	""	"136.6"	"1.3"	"127.7"	"120.4"	""	"884"	"13"	"36.000"	"29.000"	"2.24606473611768"	"14"	"0.002937"	"0.0275"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYEELDLR"	"[K].aLYEELDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"675.87646"	"1350.74565"	"1350.74665"	"-0.74"	"-0.00050"	"6/70"	"6"	"70"	"422036.70703125"	"HCD"	"MS2"	"22.49279"	"22.7"	"100.000"	"89.8449"	"31359"	"31359"	"31352"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.9"	""	"29.7"	""	"30.8"	""	"35.0"	"0.8"	"39.1"	"46.6"	""	"889"	"42"	"36.000"	"29.000"	"0.00266607133395574"	"22"	"0"	"0.001067"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYEELDLR"	"[K].aLYEELDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"675.87708"	"1350.74687"	"1350.74665"	"0.17"	"0.00011"	"6/70"	"6"	"70"	"380540.049987793"	"HCD"	"MS2"	"6.943296"	"20.7"	"100.000"	"89.8139"	"31345"	"31345"	"31338"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.7"	""	"21.8"	""	"31.3"	""	"29.5"	"0.5"	"38.0"	"43.5"	""	"890"	"41"	"36.000"	"29.000"	"0.00338345193238381"	"23"	"0"	"0.002176"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYEELDLR"	"[K].aLYEELDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"675.87762"	"1350.74797"	"1350.74665"	"0.98"	"0.00066"	"6/70"	"6"	"70"	"313714.162109375"	"HCD"	"MS2"	"0"	"14.9"	"100.000"	"89.5879"	"31258"	"31258"	"31242"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.0"	""	"20.5"	""	"23.6"	""	"16.8"	""	"27.3"	"27.0"	""	"899"	"45"	"36.000"	"29.000"	"0.00138589298363708"	"23"	"0"	"0.002976"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYEELDLR"	"[K].aLYEELDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"675.87769"	"1350.74809"	"1350.74665"	"1.07"	"0.00072"	"4/70"	"4"	"70"	"246681.343811035"	"HCD"	"MS2"	"14.39079"	"13.1"	"100.000"	"89.5456"	"31240"	"31240"	"31226"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.1"	""	"12.8"	""	"18.0"	""	"20.7"	""	"26.4"	"26.6"	""	"902"	"16"	"36.000"	"29.000"	"1.16997489231559"	"17"	"0.005369"	"0.06109"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQDLLNVK"	"[RK].EYQDLLNVk.[M]"	"K9(TMT6plex)"	"2"	"6"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P16884; P23565; P19527; P48675; P31000; P12839"	"Neurofilament heavy polypeptide OS=Rattus norvegicus OX=10116 GN=Nefh PE=1 SV=4; Alpha-internexin OS=Rattus norvegicus OX=10116 GN=Ina PE=1 SV=2; Neurofilament light polypeptide OS=Rattus norvegicus OX=10116 GN=Nefl PE=1 SV=3; Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2; Neurofilament medium polypeptide OS=Rattus norvegicus OX=10116 GN=Nefm PE=1 SV=4"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"675.87775"	"1350.74822"	"1350.74665"	"1.16"	"0.00078"	"6/82"	"6"	"82"	"270069.684814453"	"HCD"	"MS2"	"25.86872"	"18.4"	"100.000"	"74.7990"	"25394"	"25394"	"25375"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.3"	""	"27.8"	""	"21.6"	""	"32.9"	"1.0"	"36.6"	"30.9"	""	"902"	"41"	"36.000"	"29.000"	"0.00381220759167291"	"24"	"0.006574"	"0.07402"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VSSDEDLK"	"[R].vSSDEDLk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"0"	"2"	"2"	"0.0345"	"0.0000"	"1"	"1"	"1"	"675.87909"	"1350.75090"	"1350.75168"	"-0.58"	"-0.00039"	"7/64"	"7"	"64"	"2603768.14587402"	"HCD"	"MS2"	"4.198944"	"206.8"	"100.000"	"45.0909"	"13337"	"13337"	"13319"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"310.3"	""	"210.3"	""	"227.8"	""	"377.7"	"1.2"	"422.1"	"413.3"	""	"861"	"29"	"36.000"	"29.000"	"0.0496561627491981"	""	"0.001374"	"0.0165"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VSSDEDLK"	"[R].vSSDEDLk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0303"	"2"	"2"	"2"	"675.87952"	"1350.75176"	"1350.75168"	"0.06"	"0.00004"	"12/64"	"12"	"64"	"2662229.97283936"	"HCD"	"MS2"	"6.67146"	"206.3"	"100.000"	"45.2132"	"13376"	"13376"	"13355"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"323.9"	""	"204.5"	""	"236.7"	""	"378.1"	""	"413.3"	"402.9"	""	"879"	"32"	"36.000"	"29.000"	"0.0254658912079614"	""	"0.001311"	"0.01576"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPK"	"[R].tFEGVDPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.3704"	"0.0000"	"1"	"1"	"1"	"675.88666"	"1350.76604"	"1350.76694"	"-0.67"	"-0.00045"	"6/66"	"6"	"66"	"1231641.87841797"	"HCD"	"MS2"	"0"	"88.5"	"100.000"	"59.1842"	"19066"	"19066"	"19048"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"129.3"	""	"124.3"	""	"132.5"	""	"131.2"	""	"153.4"	"168.8"	""	"888"	"27"	"36.000"	"29.000"	"0.0815423024446665"	""	"0.003449"	"0.03442"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPK"	"[R].tFEGVDPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"675.88678"	"1350.76628"	"1350.76694"	"-0.48"	"-0.00033"	"6/66"	"6"	"66"	"618406.592224121"	"HCD"	"MS2"	"15.54263"	"46.4"	"100.000"	"59.0489"	"19026"	"19026"	"19005"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"72.1"	""	"63.2"	""	"71.8"	""	"74.3"	"0.5"	"73.5"	"83.8"	""	"888"	"27"	"36.000"	"29.000"	"0.0873741512629838"	"20"	"0.003922"	"0.03968"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPK"	"[R].tFEGVDPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"675.88702"	"1350.76677"	"1350.76694"	"-0.12"	"-0.00008"	"5/66"	"5"	"66"	"1975031.52185059"	"HCD"	"MS2"	"7.245295"	"134.6"	"100.000"	"58.7383"	"18899"	"18899"	"18879"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"222.8"	""	"189.8"	""	"180.9"	""	"209.2"	""	"219.6"	"252.9"	""	"891"	"32"	"36.000"	"29.000"	"0.0298433593495063"	"25"	"0.002795"	"0.02646"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPK"	"[R].tFEGVDPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"675.88708"	"1350.76689"	"1350.76694"	"-0.03"	"-0.00002"	"5/66"	"5"	"66"	"1136272.54089355"	"HCD"	"MS2"	"15.60984"	"84.3"	"100.000"	"58.8804"	"18942"	"18942"	"18920"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"134.5"	""	"118.9"	""	"124.1"	""	"130.0"	""	"148.6"	"146.8"	""	"891"	"29"	"36.000"	"29.000"	"0.055315610303242"	"22"	"0.002795"	"0.02637"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGESDDSILR"	"[R].mGESDDSILR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05765"	"40S ribosomal protein S21 OS=Rattus norvegicus OX=10116 GN=Rps21 PE=1 SV=1"	"P05765"	"40S ribosomal protein S21 OS=Rattus norvegicus OX=10116 GN=Rps21 PE=1 SV=1"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"676.33936"	"1351.67143"	"1351.67250"	"-0.79"	"-0.00053"	"7/80"	"7"	"80"	"582493.762695313"	"HCD"	"MS2"	"11.43992"	"43.8"	"100.000"	"56.4464"	"17964"	"17964"	"17942"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.3"	""	"43.5"	""	"42.0"	""	"70.2"	""	"100.5"	"102.7"	""	"690"	"29"	"35.000"	"28.000"	"0.0413827259586535"	"15"	"0"	"0.002544"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGESDDSILR"	"[R].mGESDDSILR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05765"	"40S ribosomal protein S21 OS=Rattus norvegicus OX=10116 GN=Rps21 PE=1 SV=1"	"P05765"	"40S ribosomal protein S21 OS=Rattus norvegicus OX=10116 GN=Rps21 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.33990"	"1351.67253"	"1351.67250"	"0.03"	"0.00002"	"8/80"	"8"	"80"	"845329.102905273"	"HCD"	"MS2"	"17.31999"	"58.6"	"100.000"	"56.5545"	"17994"	"17994"	"17972"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"79.2"	""	"51.6"	""	"52.0"	""	"93.0"	"1.9"	"136.3"	"143.4"	""	"693"	"42"	"35.000"	"28.000"	"0.0023372396159733"	"15"	"0"	"0.000222"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNGIAFSDGER"	"[K].gNGIAFSDGER.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O35293"	"Cytochrome P450 2F2 OS=Rattus norvegicus OX=10116 GN=Cyp2f2 PE=2 SV=1"	"O35293"	"Cytochrome P450 2F2 OS=Rattus norvegicus OX=10116 GN=Cyp2f2 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"676.34357"	"1351.67986"	"1351.68036"	"-0.37"	"-0.00025"	"5/104"	"5"	"104"	"781249.520690918"	"HCD"	"MS2"	"74.79591"	"52.1"	"100.000"	"44.2003"	"12969"	"12969"	"12939"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"69.5"	""	"62.6"	""	"72.2"	""	"82.3"	""	"106.0"	"101.8"	""	"701"	"4"	"35.000"	"28.000"	"15.1596097777771"	"15"	"0.009302"	"0.1211"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFENWLER"	"[R].eFENWLER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"676.34546"	"1351.68364"	"1351.68438"	"-0.55"	"-0.00037"	"5/76"	"5"	"76"	"376925.53338623"	"HCD"	"MS2"	"4.566306"	"21.2"	"100.000"	"90.1698"	"31485"	"31485"	"31468"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.8"	""	"26.1"	""	"24.1"	""	"36.5"	""	"41.1"	"46.0"	""	"783"	"30"	"35.000"	"28.000"	"0.0388804932956795"	"25"	"0.001728"	"0.02018"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFENWLER"	"[R].eFENWLER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"676.34564"	"1351.68401"	"1351.68438"	"-0.28"	"-0.00019"	"6/76"	"6"	"76"	"356694.563476563"	"HCD"	"MS2"	"3.34519"	"23.5"	"100.000"	"90.1501"	"31475"	"31475"	"31464"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.6"	""	"20.6"	""	"27.5"	""	"40.2"	""	"41.3"	"59.7"	""	"781"	"36"	"35.000"	"28.000"	"0.010804907125332"	"27"	"0.0003538"	"0.006542"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFENWLER"	"[R].eFENWLER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"676.34564"	"1351.68401"	"1351.68438"	"-0.28"	"-0.00019"	"6/76"	"6"	"76"	"515114.002197266"	"HCD"	"MS2"	"36.82441"	"31.3"	"100.000"	"89.8674"	"31366"	"31366"	"31355"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.9"	""	"33.9"	""	"41.5"	""	"50.1"	""	"54.6"	"75.6"	""	"781"	"13"	"35.000"	"28.000"	"1.75639033335829"	"19"	"0.00379"	"0.03883"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFENWLER"	"[R].eFENWLER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"676.34583"	"1351.68437"	"1351.68438"	"-0.01"	"0.00000"	"6/76"	"6"	"76"	"545799.071594238"	"HCD"	"MS2"	"42.68386"	"30.5"	"100.000"	"89.8820"	"31372"	"31372"	"31366"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.1"	""	"36.5"	""	"32.0"	""	"58.4"	""	"58.1"	"66.9"	""	"785"	"15"	"35.000"	"28.000"	"1.16906769855096"	"18"	"0.005001"	"0.05703"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDVAQYIER"	"[R].eDVAQYIER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"676.35590"	"1351.70452"	"1351.70551"	"-0.74"	"-0.00050"	"6/86"	"6"	"86"	"798114.170288086"	"HCD"	"MS2"	"27.45778"	"43.4"	"100.000"	"67.2142"	"22308"	"22308"	"22284"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.5"	""	"35.0"	""	"41.6"	""	"74.7"	""	"112.0"	"101.9"	""	"866"	"37"	"36.000"	"29.000"	"0.00854059044737733"	"25"	"0"	"0.0005037"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDVAQYIER"	"[R].eDVAQYIER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"676.35602"	"1351.70476"	"1351.70551"	"-0.56"	"-0.00038"	"7/86"	"7"	"86"	"747192.137756348"	"HCD"	"MS2"	"43.93409"	"41.5"	"100.000"	"67.3148"	"22334"	"22334"	"22306"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.2"	""	"32.9"	""	"40.4"	""	"74.2"	"0.6"	"96.6"	"95.1"	""	"866"	"40"	"36.000"	"29.000"	"0.00391280222121757"	"27"	"0"	"0.000376"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYGITGDNVR"	"[K].qYGITGDNVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLH7"	"CDK5 regulatory subunit-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cdk5rap3 PE=1 SV=1"	"Q9JLH7"	"CDK5 regulatory subunit-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cdk5rap3 PE=1 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"676.36108"	"1351.71489"	"1351.71674"	"-1.37"	"-0.00093"	"6/94"	"6"	"94"	"2164949.98553467"	"HCD"	"MS2"	"40.98663"	"145.8"	"100.000"	"41.8194"	"12010"	"12010"	"11985"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"245.2"	""	"192.4"	""	"188.5"	""	"257.1"	""	"246.0"	"251.7"	""	"895"	"18"	"36.000"	"29.000"	"0.781255413431926"	"15"	"0.0001301"	"0.00447"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYGITGDNVR"	"[K].qYGITGDNVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLH7"	"CDK5 regulatory subunit-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cdk5rap3 PE=1 SV=1"	"Q9JLH7"	"CDK5 regulatory subunit-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cdk5rap3 PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"676.36279"	"1351.71831"	"1351.71674"	"1.16"	"0.00078"	"9/94"	"9"	"94"	"2226522.35357666"	"HCD"	"MS2"	"33.13576"	"139.6"	"100.000"	"41.9532"	"12054"	"12054"	"12033"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"232.2"	""	"188.4"	""	"168.1"	""	"242.4"	""	"255.0"	"237.5"	""	"860"	"22"	"36.000"	"29.000"	"0.265135850800437"	"15"	"0.0001301"	"0.004602"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAEQMAK"	"[R].aEAEQmAk.[K]"	"N-Term(TMT6plex); M6(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"676.36804"	"1351.72881"	"1351.72917"	"-0.27"	"-0.00018"	"10/66"	"10"	"66"	"309154.07598877"	"HCD"	"MS2"	"0"	"23.4"	"100.000"	"25.5530"	"5399"	"5399"	"5377"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.2"	""	"22.3"	""	"24.5"	""	"60.1"	""	"53.5"	"43.5"	""	"880"	"19"	"36.000"	"29.000"	"0.617238030007261"	"20"	"0.007602"	"0.09059"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAEQMAK"	"[R].aEAEQmAk.[K]"	"N-Term(TMT6plex); M6(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"676.36816"	"1351.72905"	"1351.72917"	"-0.09"	"-0.00006"	"7/66"	"7"	"66"	"443845.438354492"	"HCD"	"MS2"	"0"	"30.2"	"100.000"	"25.3760"	"5342"	"5342"	"5313"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.7"	""	"25.0"	""	"26.6"	""	"71.7"	"1.0"	"68.5"	"69.4"	""	"879"	"28"	"36.000"	"29.000"	"0.0656083143009968"	"24"	"0.006189"	"0.0703"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQEIATYR"	"[R].lEQEIATYR.[RS]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"P25030; Q6IFV4; Q6IFU7; Q6IFU8; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 20 OS=Rattus norvegicus OX=10116 GN=Krt20 PE=1 SV=2; Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"676.37354"	"1351.73979"	"1351.74190"	"-1.56"	"-0.00105"	"6/86"	"6"	"86"	"931001.78729248"	"HCD"	"MS2"	"12.75887"	"51.3"	"100.000"	"68.5471"	"22850"	"22850"	"22831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.7"	""	"62.6"	""	"67.7"	""	"84.5"	"0.3"	"97.6"	"113.1"	""	"886"	"42"	"36.000"	"29.000"	"0.00270647317033168"	""	"0"	"0.0006934"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQEIATYR"	"[R].lEQEIATYR.[RS]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"P25030; Q6IFV4; Q6IFU7; Q6IFU8; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 20 OS=Rattus norvegicus OX=10116 GN=Krt20 PE=1 SV=2; Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"676.37360"	"1351.73992"	"1351.74190"	"-1.47"	"-0.00099"	"7/86"	"7"	"86"	"778172.515625"	"HCD"	"MS2"	"33.0083"	"44.9"	"100.000"	"68.6915"	"22895"	"22895"	"22869"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.2"	""	"54.3"	""	"60.3"	""	"74.8"	""	"78.3"	"104.8"	""	"874"	"50"	"36.000"	"29.000"	"0.000405958311022832"	"28"	"0"	"0.0002273"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQEIATYR"	"[R].lEQEIATYR.[RS]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"P25030; Q6IFV4; Q6IFU7; Q6IFU8; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 20 OS=Rattus norvegicus OX=10116 GN=Krt20 PE=1 SV=2; Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.37372"	"1351.74016"	"1351.74190"	"-1.28"	"-0.00087"	"6/86"	"6"	"86"	"319915.830749512"	"HCD"	"MS2"	"8.321201"	"19.8"	"100.000"	"69.5217"	"23248"	"23248"	"23224"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.6"	""	"23.2"	""	"25.3"	""	"31.1"	"1.0"	"37.3"	"45.5"	""	"896"	"32"	"36.000"	"29.000"	"0.0273702027157696"	"15"	"0.0004639"	"0.007992"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQEIATYR"	"[R].lEQEIATYR.[RS]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"P25030; Q6IFV4; Q6IFU7; Q6IFU8; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 20 OS=Rattus norvegicus OX=10116 GN=Krt20 PE=1 SV=2; Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"676.37427"	"1351.74126"	"1351.74190"	"-0.47"	"-0.00032"	"7/86"	"7"	"86"	"2815094.69213867"	"HCD"	"MS2"	"0"	"124.0"	"100.000"	"69.2910"	"23140"	"23140"	"23123"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"141.2"	""	"148.3"	""	"177.4"	""	"194.0"	""	"237.8"	"280.3"	""	"888"	"54"	"36.000"	"29.000"	"0.000173134242084385"	""	"0"	"0.0005529"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQEIATYR"	"[R].lEQEIATYR.[RS]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"P25030; Q6IFV4; Q6IFU7; Q6IFU8; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 20 OS=Rattus norvegicus OX=10116 GN=Krt20 PE=1 SV=2; Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"676.37433"	"1351.74138"	"1351.74190"	"-0.38"	"-0.00026"	"7/86"	"7"	"86"	"2182298.87408447"	"HCD"	"MS2"	"1.061703"	"102.7"	"100.000"	"69.1649"	"23103"	"23103"	"23086"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"115.8"	""	"126.0"	""	"133.9"	""	"171.9"	""	"187.6"	"242.5"	""	"904"	"54"	"36.000"	"29.000"	"0.000181609446503721"	""	"0"	"0.0005179"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQEIATYR"	"[R].lEQEIATYR.[RS]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"P25030; Q6IFV4; Q6IFU7; Q6IFU8; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 20 OS=Rattus norvegicus OX=10116 GN=Krt20 PE=1 SV=2; Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"676.37439"	"1351.74150"	"1351.74190"	"-0.29"	"-0.00020"	"7/86"	"7"	"86"	"16058358.7018433"	"HCD"	"MS2"	"0"	"420.0"	"59.223"	"68.9798"	"23013"	"23013"	"22996"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"451.0"	""	"467.9"	""	"575.8"	""	"708.8"	"1.2"	"810.2"	"974.6"	""	"903"	"51"	"36.000"	"29.000"	"0.000385174701478942"	"28"	"0"	"0.001222"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQEIATYR"	"[R].lEQEIATYR.[RS]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"P25030; Q6IFV4; Q6IFU7; Q6IFU8; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 20 OS=Rattus norvegicus OX=10116 GN=Krt20 PE=1 SV=2; Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"676.37451"	"1351.74175"	"1351.74190"	"-0.11"	"-0.00007"	"7/86"	"7"	"86"	"16210612.2514648"	"HCD"	"MS2"	"0"	"407.5"	"59.899"	"68.8540"	"22976"	"22976"	"22959"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"442.4"	""	"469.9"	""	"560.9"	""	"700.1"	""	"755.3"	"940.7"	""	"903"	"51"	"36.000"	"29.000"	"0.000386062620867434"	"28"	"0"	"0.00058"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THEEHLK"	"[K].tHEEHLk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"451.26245"	"1351.77280"	"1351.77342"	"-0.46"	"-0.00021"	"6/54"	"6"	"54"	"3631200.38702393"	"HCD"	"MS2"	"14.34723"	"194.5"	"100.000"	"21.0782"	"3607"	"3607"	"3585"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"283.6"	""	"287.0"	""	"289.9"	""	"303.7"	"3.8"	"360.5"	"312.4"	""	"768"	"30"	"35.000"	"28.000"	"0.0360853751256821"	"22"	"0.000936"	"0.01179"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THEEHLK"	"[K].tHEEHLk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"451.26248"	"1351.77289"	"1351.77342"	"-0.39"	"-0.00018"	"9/54"	"9"	"54"	"3648260.84399414"	"HCD"	"MS2"	"10.82148"	"197.5"	"100.000"	"21.1450"	"3616"	"3616"	"3598"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"289.5"	""	"281.2"	""	"321.6"	""	"282.6"	"2.5"	"365.0"	"327.2"	""	"768"	"21"	"35.000"	"28.000"	"0.342240360243358"	"14"	"0.003922"	"0.03999"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDFEIIK"	"[R].eDFEIIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"676.39661"	"1351.78594"	"1351.78734"	"-1.04"	"-0.00070"	"5/54"	"5"	"54"	"267990.324523926"	"HCD"	"MS2"	"17.46198"	"24.3"	"100.000"	"84.0910"	"29112"	"29112"	"29088"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.8"	""	"28.8"	""	"26.9"	""	"45.2"	""	"46.2"	"52.9"	""	"713"	"32"	"35.000"	"28.000"	"0.0247776169220406"	""	"0.002379"	"0.02461"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDFEILK"	"[R].eDFEILk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O54874"	"Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus OX=10116 GN=Cdc42bpa PE=1 SV=1"	"O54874"	"Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus OX=10116 GN=Cdc42bpa PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"676.39661"	"1351.78594"	"1351.78734"	"-1.04"	"-0.00070"	"5/54"	"5"	"54"	"267990.324523926"	"HCD"	"MS2"	"17.46198"	"24.3"	"100.000"	"84.0910"	"29112"	"29112"	"29088"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.8"	""	"28.8"	""	"26.9"	""	"45.2"	""	"46.2"	"52.9"	""	"713"	"32"	"35.000"	"28.000"	"0.0247776169220406"	""	"0.002379"	"0.02461"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDFEIIK"	"[R].eDFEIIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"676.39691"	"1351.78655"	"1351.78734"	"-0.59"	"-0.00040"	"6/54"	"6"	"54"	"250101.870300293"	"HCD"	"MS2"	"29.98033"	"22.5"	"100.000"	"84.0865"	"29111"	"29111"	"29093"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.6"	""	"29.4"	""	"22.3"	""	"37.1"	"0.7"	"48.6"	"44.8"	""	"722"	"32"	"35.000"	"28.000"	"0.0206303787838544"	""	"0.0007829"	"0.009479"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDFEILK"	"[R].eDFEILk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O54874"	"Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus OX=10116 GN=Cdc42bpa PE=1 SV=1"	"O54874"	"Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus OX=10116 GN=Cdc42bpa PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"676.39691"	"1351.78655"	"1351.78734"	"-0.59"	"-0.00040"	"6/54"	"6"	"54"	"250101.870300293"	"HCD"	"MS2"	"29.98033"	"22.5"	"100.000"	"84.0865"	"29111"	"29111"	"29093"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.6"	""	"29.4"	""	"22.3"	""	"37.1"	"0.7"	"48.6"	"44.8"	""	"722"	"32"	"35.000"	"28.000"	"0.0206303787838544"	""	"0.0007829"	"0.009479"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFQQELDTR"	"[K].sFQQELDTR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHB5"	"Translin-associated protein X OS=Rattus norvegicus OX=10116 GN=Tsnax PE=1 SV=1"	"Q9JHB5"	"Translin-associated protein X OS=Rattus norvegicus OX=10116 GN=Tsnax PE=1 SV=1"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"676.85352"	"1352.69975"	"1352.70076"	"-0.74"	"-0.00050"	"7/90"	"7"	"90"	"1541094.56958008"	"HCD"	"MS2"	"39.91424"	"113.2"	"100.000"	"51.4741"	"15927"	"15927"	"15899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"160.2"	"2.9"	"132.8"	""	"142.3"	""	"162.4"	""	"233.5"	"240.8"	""	"756"	"37"	"35.000"	"28.000"	"0.00768230950133891"	"23"	"0"	"0.0005351"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGTDPDFK"	"[K].nGTDPDFk.[C]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"676.85864"	"1352.71001"	"1352.70982"	"0.14"	"0.00010"	"12/76"	"12"	"76"	"1295899.91021729"	"HCD"	"MS2"	"20.01884"	"111.3"	"100.000"	"49.8531"	"15278"	"15278"	"15254"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"154.9"	""	"111.6"	""	"128.7"	""	"199.0"	""	"213.6"	"250.3"	""	"741"	"18"	"35.000"	"28.000"	"0.62630836517383"	"19"	"0.007413"	"0.08819"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"676.89307"	"1352.77886"	"1352.78259"	"-2.76"	"-0.00187"	"6/62"	"6"	"62"	"2220165.29180908"	"HCD"	"MS2"	"0"	"187.4"	"100.000"	"59.7288"	"19290"	"19290"	"19286"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"268.9"	""	"267.3"	""	"236.5"	""	"330.8"	""	"337.2"	"334.8"	""	"718"	"40"	"35.000"	"28.000"	"0.00353259986968247"	""	"0.0001301"	"0.004947"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"676.89355"	"1352.77983"	"1352.78259"	"-2.04"	"-0.00138"	"7/62"	"7"	"62"	"420477.192626953"	"HCD"	"MS2"	"0"	"42.3"	"100.000"	"60.7847"	"19684"	"19684"	"19670"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.9"	""	"48.3"	""	"63.1"	""	"63.0"	""	"93.9"	"88.9"	""	"698"	"44"	"35.000"	"28.000"	"0.0012497565654882"	"25"	"0"	"0.001568"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"676.89355"	"1352.77983"	"1352.78259"	"-2.04"	"-0.00138"	"12/62"	"12"	"62"	"2040668.61639404"	"HCD"	"MS2"	"0"	"165.8"	"100.000"	"59.9634"	"19373"	"19373"	"19368"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"242.8"	""	"226.4"	""	"228.0"	""	"269.1"	"1.8"	"300.7"	"301.7"	""	"698"	"37"	"35.000"	"28.000"	"0.00696346547924139"	"26"	"0.0001301"	"0.004812"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.6061"	"0.0000"	"1"	"1"	"1"	"451.59824"	"1352.78015"	"1352.78259"	"-1.80"	"-0.00081"	"6/62"	"6"	"62"	"3427040.92462158"	"HCD"	"MS2"	"46.57375"	"137.3"	"100.000"	"60.1462"	"19437"	"19437"	"19426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"159.2"	""	"164.0"	""	"174.1"	""	"203.5"	""	"221.1"	"383.3"	""	"700"	"33"	"35.000"	"28.000"	"0.0162955132733036"	"27"	"0.000936"	"0.01338"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"676.89398"	"1352.78069"	"1352.78259"	"-1.41"	"-0.00095"	"12/62"	"12"	"62"	"9587093.82373047"	"HCD"	"MS2"	"0"	"711.0"	"100.000"	"59.9890"	"19384"	"19384"	"19377"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"998.7"	""	"938.8"	""	"966.6"	""	"1136.5"	""	"1259.9"	"1443.6"	""	"687"	"39"	"35.000"	"28.000"	"0.00430453993592376"	"26"	"0.0003538"	"0.006425"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.6757"	"0.0000"	"1"	"1"	"1"	"451.59854"	"1352.78107"	"1352.78259"	"-1.12"	"-0.00051"	"6/62"	"6"	"62"	"2599209.42138672"	"HCD"	"MS2"	"41.15776"	"102.5"	"100.000"	"60.1312"	"19437"	"19437"	"19425"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"117.4"	""	"127.8"	""	"132.7"	""	"137.6"	""	"162.3"	"298.6"	""	"687"	"37"	"35.000"	"28.000"	"0.00765467473774349"	"27"	"0.000936"	"0.01239"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"676.89435"	"1352.78142"	"1352.78259"	"-0.86"	"-0.00058"	"12/62"	"12"	"62"	"2423286.66662598"	"HCD"	"MS2"	"0"	"190.2"	"100.000"	"60.5005"	"19570"	"19570"	"19560"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"252.5"	""	"244.2"	""	"253.9"	""	"295.0"	""	"346.7"	"416.5"	""	"683"	"39"	"35.000"	"28.000"	"0.00449149280193649"	"26"	"0.0001301"	"0.004001"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.6857"	"0.0000"	"1"	"1"	"1"	"451.59869"	"1352.78153"	"1352.78259"	"-0.78"	"-0.00035"	"6/62"	"6"	"62"	"2549718.8359375"	"HCD"	"MS2"	"33.06249"	"105.7"	"100.000"	"59.8746"	"19342"	"19342"	"19334"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"139.7"	""	"123.5"	""	"131.7"	""	"165.5"	""	"180.9"	"262.3"	""	"683"	"35"	"35.000"	"28.000"	"0.0107743407888244"	"26"	"0.004817"	"0.05058"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"676.89441"	"1352.78154"	"1352.78259"	"-0.77"	"-0.00052"	"12/62"	"12"	"62"	"10339159.1306763"	"HCD"	"MS2"	"0"	"766.2"	"100.000"	"60.2303"	"19468"	"19468"	"19463"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1068.9"	""	"987.8"	""	"1073.5"	""	"1232.1"	""	"1348.8"	"1554.6"	""	"683"	"37"	"35.000"	"28.000"	"0.00632981049396158"	"25"	"0.0006732"	"0.008202"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"676.89453"	"1352.78179"	"1352.78259"	"-0.59"	"-0.00040"	"12/62"	"12"	"62"	"2714128.96136475"	"HCD"	"MS2"	"0"	"211.5"	"100.000"	"60.2708"	"19492"	"19492"	"19485"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"285.6"	""	"275.7"	""	"297.2"	""	"326.4"	""	"386.3"	"436.7"	""	"681"	"36"	"35.000"	"28.000"	"0.00914359783746722"	"24"	"0.0001301"	"0.004188"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINEEYK"	"[R].vINEEYk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"676.89459"	"1352.78191"	"1352.78259"	"-0.50"	"-0.00034"	"12/58"	"12"	"58"	"1402536.35321045"	"HCD"	"MS2"	"13.07944"	"119.1"	"100.000"	"53.7408"	"16852"	"16852"	"16833"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"164.3"	""	"131.4"	""	"142.6"	""	"180.4"	""	"262.1"	"251.2"	""	"681"	"31"	"35.000"	"28.000"	"0.0243285999028712"	"22"	"0.003189"	"0.03222"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINEEYK"	"[R].vINEEYk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"676.89465"	"1352.78203"	"1352.78259"	"-0.41"	"-0.00028"	"12/58"	"12"	"58"	"1370835.2255249"	"HCD"	"MS2"	"5.627321"	"119.8"	"100.000"	"53.4776"	"16756"	"16756"	"16732"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"159.9"	""	"136.6"	""	"129.5"	""	"183.4"	""	"260.5"	"269.3"	""	"685"	"30"	"35.000"	"28.000"	"0.0315253978325461"	"17"	"0.003449"	"0.03354"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINEEYK"	"[R].vINEEYk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.89471"	"1352.78215"	"1352.78259"	"-0.32"	"-0.00022"	"5/58"	"5"	"58"	"580865.321777344"	"HCD"	"MS2"	"13.43431"	"58.6"	"100.000"	"53.7884"	"16883"	"16883"	"16860"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"73.3"	""	"72.0"	""	"69.8"	""	"100.9"	""	"112.7"	"128.3"	""	"685"	"28"	"35.000"	"28.000"	"0.0532918228824738"	"15"	"0.001812"	"0.02069"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMQPTHPIR"	"[K].emQPTHPIR.[L]"	"N-Term(TMT6plex); M2(Oxidation)"	"2"	"3"	"P68255; P63102"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P35213; P68255; P63102"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"677.36047"	"1353.71367"	"1353.71464"	"-0.71"	"-0.00048"	"6/84"	"6"	"84"	"1429053.09680176"	"HCD"	"MS2"	"0"	"48.7"	"100.000"	"20.6705"	"3442"	"3442"	"3425"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.1"	""	"59.7"	""	"62.5"	""	"96.7"	""	"85.3"	"92.8"	""	"731"	"17"	"35.000"	"28.000"	"0.75838089062977"	"14"	"0.008641"	"0.1067"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGFSDADVK"	"[K].gGFSDADVk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5M7V8"	"Thyroid hormone receptor-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Thrap3 PE=1 SV=1"	"Q5M7V8"	"Thyroid hormone receptor-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Thrap3 PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"677.37335"	"1353.73943"	"1353.74145"	"-1.50"	"-0.00101"	"8/70"	"8"	"70"	"1347852.18103027"	"HCD"	"MS2"	"35.12971"	"99.5"	"100.000"	"51.2316"	"15839"	"15839"	"15815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"140.7"	""	"109.8"	""	"112.4"	""	"180.1"	"1.0"	"197.3"	"203.4"	""	"725"	"21"	"35.000"	"28.000"	"0.27752877000533"	"18"	"0.0001301"	"0.004765"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGFSDADVK"	"[K].gGFSDADVk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5M7V8"	"Thyroid hormone receptor-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Thrap3 PE=1 SV=1"	"Q5M7V8"	"Thyroid hormone receptor-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Thrap3 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"677.37335"	"1353.73943"	"1353.74145"	"-1.50"	"-0.00101"	"8/70"	"8"	"70"	"1345431.8394165"	"HCD"	"MS2"	"41.86662"	"99.3"	"100.000"	"51.5756"	"15968"	"15968"	"15947"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"128.9"	""	"110.0"	""	"113.1"	""	"185.1"	""	"203.9"	"203.6"	""	"725"	"14"	"35.000"	"28.000"	"1.33446752945418"	"19"	"0.0002479"	"0.005865"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFEDPETTR"	"[K].mFEDPETTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"677.82843"	"1354.64958"	"1354.65103"	"-1.07"	"-0.00072"	"5/74"	"5"	"74"	"1404064.65509033"	"HCD"	"MS2"	"20.80719"	"83.5"	"100.000"	"54.4297"	"17130"	"17130"	"17104"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"124.3"	""	"103.3"	""	"121.7"	""	"106.0"	"0.2"	"163.0"	"173.3"	""	"423"	"28"	"33.000"	"26.000"	"0.0299440384460923"	"18"	"0.0008629"	"0.01092"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFEDPETTR"	"[K].mFEDPETTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"677.82849"	"1354.64971"	"1354.65103"	"-0.98"	"-0.00066"	"7/74"	"7"	"74"	"1143380.64678955"	"HCD"	"MS2"	"22.12077"	"69.3"	"100.000"	"54.4120"	"17135"	"17135"	"17113"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"107.3"	""	"89.2"	""	"95.0"	""	"80.7"	""	"140.9"	"144.3"	""	"423"	"22"	"33.000"	"26.000"	"0.121705546746809"	"17"	"0.000936"	"0.01309"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFEDPETTR"	"[K].mFEDPETTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"677.82922"	"1354.65117"	"1354.65103"	"0.10"	"0.00007"	"4/74"	"4"	"74"	"947861.55090332"	"HCD"	"MS2"	"40.15758"	"63.5"	"100.000"	"54.1128"	"17016"	"17016"	"16987"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"94.3"	""	"84.5"	""	"95.7"	""	"70.7"	""	"131.7"	"130.6"	""	"411"	"20"	"33.000"	"26.000"	"0.210771470844664"	"14"	"0.004942"	"0.05324"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTIEQYK"	"[R].dTIEQYk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"677.88446"	"1354.76164"	"1354.76185"	"-0.15"	"-0.00010"	"8/58"	"8"	"58"	"930485.568847656"	"HCD"	"MS2"	"5.839095"	"75.5"	"100.000"	"52.8977"	"16519"	"16519"	"16497"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"106.6"	""	"96.4"	""	"84.9"	""	"107.9"	""	"160.4"	"162.1"	""	"669"	"29"	"35.000"	"28.000"	"0.0377047549090708"	"25"	"0.003449"	"0.03341"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTIEQYK"	"[R].dTIEQYk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"677.88501"	"1354.76274"	"1354.76185"	"0.66"	"0.00045"	"8/58"	"8"	"58"	"852695.321472168"	"HCD"	"MS2"	"0"	"70.7"	"100.000"	"53.1309"	"16603"	"16603"	"16579"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"97.8"	""	"89.4"	""	"80.4"	""	"101.0"	""	"151.8"	"152.3"	""	"658"	"29"	"35.000"	"28.000"	"0.0382997463676052"	"25"	"0.003507"	"0.03654"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPPSPEK"	"[K].eLPPSPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"677.90186"	"1354.79643"	"1354.79824"	"-1.33"	"-0.00090"	"6/68"	"6"	"68"	"436174.683288574"	"HCD"	"MS2"	"0"	"28.5"	"100.000"	"50.3570"	"15483"	"15483"	"15464"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.0"	""	"30.1"	""	"34.7"	""	"60.2"	""	"54.6"	"58.5"	""	"489"	"29"	"33.000"	"26.000"	"0.03382819796586"	"15"	"0.006308"	"0.07131"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPPSPEK"	"[K].eLPPSPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"677.90192"	"1354.79656"	"1354.79824"	"-1.24"	"-0.00084"	"6/68"	"6"	"68"	"554202.12512207"	"HCD"	"MS2"	"19.36367"	"38.3"	"100.000"	"50.7226"	"15632"	"15632"	"15604"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.1"	""	"35.8"	""	"53.1"	""	"78.1"	""	"82.8"	"69.9"	""	"489"	"26"	"33.000"	"26.000"	"0.0597418770133676"	"16"	"0.006769"	"0.07685"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPPSPEK"	"[K].eLPPSPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"677.90210"	"1354.79692"	"1354.79824"	"-0.97"	"-0.00066"	"5/68"	"5"	"68"	"442023.731872559"	"HCD"	"MS2"	"0"	"30.8"	"100.000"	"50.3868"	"15495"	"15495"	"15474"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.2"	""	"33.6"	""	"38.8"	""	"60.9"	""	"57.9"	"64.5"	""	"491"	"30"	"33.000"	"26.000"	"0.0222869940158745"	"20"	"0.00557"	"0.06305"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLDARPEVIR"	"[R].gLDARPEVIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.27090"	"1354.79816"	"1354.80041"	"-1.66"	"-0.00075"	"8/90"	"8"	"90"	"1752873.9284668"	"HCD"	"MS2"	"9.579838"	"72.9"	"100.000"	"43.1487"	"12553"	"12553"	"12531"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"86.0"	""	"93.1"	""	"96.9"	""	"113.7"	""	"142.9"	"159.2"	""	"495"	"13"	"33.000"	"26.000"	"1.3230467895075"	"13"	"0.0001301"	"0.003851"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLDARPEVIR"	"[R].gLDARPEVIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"452.27090"	"1354.79816"	"1354.80041"	"-1.66"	"-0.00075"	"10/90"	"10"	"90"	"3541242.64294434"	"HCD"	"MS2"	"15.51195"	"125.2"	"100.000"	"42.8337"	"12424"	"12424"	"12403"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"147.4"	""	"157.4"	""	"167.7"	""	"214.5"	"1.7"	"235.8"	"263.1"	""	"495"	"19"	"33.000"	"26.000"	"0.301699925733904"	"16"	"0"	"0.002846"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPPSPEK"	"[K].eLPPSPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"677.90289"	"1354.79851"	"1354.79824"	"0.20"	"0.00014"	"6/68"	"6"	"68"	"587816.368469238"	"HCD"	"MS2"	"0"	"41.9"	"100.000"	"51.1309"	"15787"	"15787"	"15762"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.5"	""	"48.9"	""	"48.8"	""	"80.6"	""	"80.4"	"97.1"	""	"517"	"26"	"34.000"	"27.000"	"0.0644852736914754"	"16"	"0.003111"	"0.03049"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLDARPEVIR"	"[R].gLDARPEVIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"0"	"3"	"3"	"0.2308"	"0.0000"	"1"	"1"	"1"	"452.27124"	"1354.79917"	"1354.80041"	"-0.92"	"-0.00042"	"8/90"	"8"	"90"	"1936433.92889404"	"HCD"	"MS2"	"9.970723"	"76.4"	"100.000"	"43.2365"	"12578"	"12578"	"12556"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"94.7"	""	"90.5"	""	"100.6"	""	"135.7"	""	"138.9"	"166.1"	""	"517"	"13"	"34.000"	"27.000"	"1.34418965103914"	"24"	"0"	"0.00357"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLDARPEVIR"	"[R].gLDARPEVIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"452.27142"	"1354.79972"	"1354.80041"	"-0.51"	"-0.00023"	"10/90"	"10"	"90"	"3207166.52496338"	"HCD"	"MS2"	"11.0031"	"112.7"	"100.000"	"42.9328"	"12454"	"12454"	"12431"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"127.7"	""	"149.1"	""	"148.7"	""	"194.8"	"1.0"	"214.5"	"233.8"	""	"517"	"20"	"34.000"	"27.000"	"0.230919467545057"	"25"	"0"	"0.002349"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESDAMFAAER"	"[K].eSDAMFAAER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ50"	"Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Rattus norvegicus OX=10116 GN=Hgs PE=1 SV=1"	"Q9JJ50"	"Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Rattus norvegicus OX=10116 GN=Hgs PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"678.32642"	"1355.64556"	"1355.64628"	"-0.54"	"-0.00036"	"6/88"	"6"	"88"	"781535.649597168"	"HCD"	"MS2"	"54.5858"	"54.3"	"100.000"	"50.1370"	"15382"	"15382"	"15358"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.6"	""	"57.9"	""	"60.0"	""	"64.3"	""	"91.7"	"187.4"	""	"380"	"31"	"32.000"	"25.000"	"0.0166630156017291"	"19"	"0"	"0.0002907"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESDAMFAAER"	"[K].eSDAMFAAER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ50"	"Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Rattus norvegicus OX=10116 GN=Hgs PE=1 SV=1"	"Q9JJ50"	"Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Rattus norvegicus OX=10116 GN=Hgs PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"678.32690"	"1355.64653"	"1355.64628"	"0.18"	"0.00013"	"6/88"	"6"	"88"	"787719.866088867"	"HCD"	"MS2"	"63.49049"	"62.3"	"100.000"	"49.7492"	"15236"	"15236"	"15206"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.5"	""	"48.2"	""	"62.4"	""	"67.9"	""	"81.8"	"283.1"	""	"382"	"25"	"32.000"	"25.000"	"0.067302836369115"	"16"	"0"	"0.00137"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"452.57986"	"1355.72504"	"1355.72691"	"-1.38"	"-0.00062"	"9/72"	"9"	"72"	"1198465.12963867"	"HCD"	"MS2"	"31.80748"	"20.3"	"100.000"	"57.6735"	"18450"	"18450"	"18426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.5"	""	"19.9"	""	"24.7"	""	"37.1"	"1.7"	"44.6"	"42.7"	""	"716"	"33"	"35.000"	"28.000"	"0.016938815070821"	"18"	"0"	"0.00186"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"678.36633"	"1355.72539"	"1355.72691"	"-1.13"	"-0.00076"	"6/72"	"6"	"72"	"5093258.82348633"	"HCD"	"MS2"	"0"	"172.7"	"100.000"	"55.1037"	"17417"	"17417"	"17400"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"171.6"	""	"141.0"	""	"177.4"	""	"326.6"	"5.4"	"411.9"	"411.4"	""	"715"	"35"	"35.000"	"28.000"	"0.0104779433517699"	"26"	"0"	"0.001474"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57999"	"1355.72541"	"1355.72691"	"-1.11"	"-0.00050"	"6/72"	"6"	"72"	"1645034.33654785"	"HCD"	"MS2"	"54.57386"	"26.5"	"100.000"	"58.7376"	"18884"	"18884"	"18856"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.3"	""	"31.4"	""	"34.7"	""	"38.7"	""	"57.1"	"61.1"	""	"715"	"7"	"35.000"	"28.000"	"7.82124780561964"	"13"	"0.003449"	"0.03287"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"452.58002"	"1355.72550"	"1355.72691"	"-1.05"	"-0.00047"	"7/72"	"7"	"72"	"17127763.8601685"	"HCD"	"MS2"	"48.62523"	"131.5"	"100.000"	"54.4077"	"17133"	"17133"	"17113"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"137.6"	"19.6"	"106.5"	""	"144.6"	""	"249.8"	"1.4"	"306.7"	"286.8"	""	"715"	"39"	"35.000"	"28.000"	"0.00464810624146901"	"22"	"0"	"0.001085"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"452.58005"	"1355.72559"	"1355.72691"	"-0.98"	"-0.00044"	"6/72"	"6"	"72"	"3453344.5690918"	"HCD"	"MS2"	"8.076191"	"46.3"	"100.000"	"51.9257"	"16111"	"16111"	"16091"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.2"	"5.1"	"42.8"	""	"54.4"	""	"82.3"	"0.9"	"109.9"	"98.0"	""	"715"	"33"	"35.000"	"28.000"	"0.0188051172734677"	"24"	"0"	"0.002341"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"678.36646"	"1355.72563"	"1355.72691"	"-0.95"	"-0.00064"	"6/72"	"6"	"72"	"15993000.8286133"	"HCD"	"MS2"	"0"	"237.9"	"84.496"	"54.7843"	"17286"	"17286"	"17268"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"243.5"	""	"196.6"	""	"245.3"	""	"481.4"	"0.7"	"553.7"	"545.6"	""	"718"	"35"	"35.000"	"28.000"	"0.0107918139264353"	"26"	"0"	"0.002474"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58008"	"1355.72568"	"1355.72691"	"-0.91"	"-0.00041"	"9/72"	"9"	"72"	"1089663.38464355"	"HCD"	"MS2"	"19.12222"	"22.3"	"100.000"	"57.7775"	"18507"	"18507"	"18479"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.6"	""	"19.8"	""	"21.6"	""	"38.0"	"0.7"	"48.0"	"64.5"	""	"718"	"26"	"35.000"	"28.000"	"0.10025232390042"	"14"	"0.0002479"	"0.005528"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"452.58008"	"1355.72568"	"1355.72691"	"-0.91"	"-0.00041"	"9/72"	"9"	"72"	"1351279.09417725"	"HCD"	"MS2"	"27.94089"	"21.3"	"100.000"	"57.3999"	"18353"	"18353"	"18329"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.6"	"2.2"	"18.7"	""	"25.9"	""	"43.5"	"2.8"	"40.3"	"42.7"	""	"718"	"27"	"35.000"	"28.000"	"0.068721787708257"	"16"	"0"	"0.003362"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"452.58008"	"1355.72568"	"1355.72691"	"-0.91"	"-0.00041"	"7/72"	"7"	"72"	"8194922.61114502"	"HCD"	"MS2"	"3.515896"	"68.1"	"100.000"	"55.4906"	"17575"	"17575"	"17559"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.0"	"14.7"	"59.3"	""	"72.9"	""	"133.2"	""	"154.5"	"148.2"	""	"718"	"37"	"35.000"	"28.000"	"0.00753519418220845"	"24"	"0"	"0.00263"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"678.36652"	"1355.72576"	"1355.72691"	"-0.86"	"-0.00058"	"6/72"	"6"	"72"	"16357122.4689941"	"HCD"	"MS2"	"0"	"194.6"	"66.753"	"55.0259"	"17371"	"17371"	"17361"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"196.7"	""	"158.6"	""	"214.5"	""	"402.5"	"0.2"	"451.3"	"429.9"	""	"718"	"35"	"35.000"	"28.000"	"0.0109419430127645"	"26"	"0"	"0.001913"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6944"	"0.0000"	"1"	"1"	"1"	"452.58017"	"1355.72596"	"1355.72691"	"-0.71"	"-0.00032"	"6/72"	"6"	"72"	"3924678.96405029"	"HCD"	"MS2"	"12.47738"	"48.9"	"100.000"	"51.5705"	"15977"	"15977"	"15957"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.8"	"4.4"	"46.7"	""	"58.5"	""	"87.9"	"1.2"	"103.5"	"103.1"	""	"727"	"36"	"35.000"	"28.000"	"0.00823198205810076"	"25"	"0.0001301"	"0.004066"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"452.58017"	"1355.72596"	"1355.72691"	"-0.71"	"-0.00032"	"7/72"	"7"	"72"	"21827258.3345947"	"HCD"	"MS2"	"2.557898"	"61.6"	"39.710"	"55.5548"	"17587"	"17587"	"17570"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.8"	"11.4"	"47.0"	""	"62.2"	""	"120.6"	""	"142.4"	"146.3"	""	"727"	"37"	"35.000"	"28.000"	"0.00715326666308438"	"24"	"0"	"0.00371"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"452.58020"	"1355.72605"	"1355.72691"	"-0.64"	"-0.00029"	"5/72"	"5"	"72"	"1157324.71923828"	"HCD"	"MS2"	"29.9368"	"23.3"	"100.000"	"58.0167"	"18590"	"18590"	"18559"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.1"	""	"18.1"	""	"19.3"	""	"37.3"	""	"61.2"	"69.1"	""	"727"	"13"	"35.000"	"28.000"	"1.71594915499315"	"15"	"0.000936"	"0.01174"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"452.58023"	"1355.72614"	"1355.72691"	"-0.57"	"-0.00026"	"9/72"	"9"	"72"	"2050568.44445801"	"HCD"	"MS2"	"43.70091"	"41.4"	"100.000"	"51.2638"	"15852"	"15852"	"15831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.5"	"3.2"	"47.7"	""	"42.8"	""	"81.8"	""	"86.4"	"87.0"	""	"727"	"16"	"35.000"	"28.000"	"0.884106157298332"	"16"	"0.000936"	"0.01248"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"452.58026"	"1355.72623"	"1355.72691"	"-0.50"	"-0.00023"	"6/72"	"6"	"72"	"19077446.7206421"	"HCD"	"MS2"	"6.048972"	"139.4"	"100.000"	"54.6476"	"17218"	"17218"	"17200"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"134.4"	"21.1"	"122.5"	""	"141.1"	""	"299.0"	""	"309.8"	"311.5"	""	"727"	"30"	"35.000"	"28.000"	"0.0405979790568234"	"22"	"0"	"0.003335"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"678.36676"	"1355.72624"	"1355.72691"	"-0.49"	"-0.00034"	"8/72"	"8"	"72"	"3653269.64819336"	"HCD"	"MS2"	"0"	"127.6"	"100.000"	"55.3704"	"17512"	"17512"	"17495"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"129.1"	""	"109.0"	""	"140.8"	""	"255.1"	""	"287.6"	"294.5"	""	"727"	"30"	"35.000"	"28.000"	"0.0386815987124539"	"27"	"0"	"0.001016"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"452.58032"	"1355.72641"	"1355.72691"	"-0.37"	"-0.00017"	"7/72"	"7"	"72"	"4960374.79846191"	"HCD"	"MS2"	"4.55274"	"47.4"	"100.000"	"55.8701"	"17715"	"17715"	"17697"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.6"	"5.8"	"42.4"	""	"51.4"	""	"88.2"	"1.9"	"102.5"	"109.1"	""	"730"	"35"	"35.000"	"28.000"	"0.0117028830344449"	"22"	"0"	"0.002237"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58038"	"1355.72660"	"1355.72691"	"-0.23"	"-0.00011"	"5/72"	"5"	"72"	"145387.179138184"	"HCD"	"MS2"	"36.97177"	"5.5"	"100.000"	"80.6639"	"27750"	"27750"	"27720"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.0"	""	"8.0"	""	"9.4"	""	"8.7"	""	"9.2"	"10.0"	""	"730"	"9"	"35.000"	"28.000"	"4.14278947720395"	"13"	"0.003922"	"0.03959"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"678.36694"	"1355.72661"	"1355.72691"	"-0.22"	"-0.00015"	"6/72"	"6"	"72"	"6059960.06646729"	"HCD"	"MS2"	"17.63293"	"196.3"	"100.000"	"54.7346"	"17253"	"17253"	"17232"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"208.8"	""	"181.9"	""	"193.5"	""	"402.3"	""	"437.9"	"447.6"	""	"730"	"34"	"35.000"	"28.000"	"0.0154629682608083"	"25"	"0"	"0.001211"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"452.58044"	"1355.72678"	"1355.72691"	"-0.10"	"-0.00005"	"9/72"	"9"	"72"	"2320882.24310303"	"HCD"	"MS2"	"37.72746"	"46.0"	"100.000"	"51.6285"	"15990"	"15990"	"15963"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.7"	"2.8"	"41.3"	""	"61.0"	""	"85.2"	""	"100.2"	"98.2"	""	"731"	"22"	"35.000"	"28.000"	"0.24484282474174"	"18"	"0.0001301"	"0.004497"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"678.36707"	"1355.72685"	"1355.72691"	"-0.04"	"-0.00003"	"6/72"	"6"	"72"	"5432064.69122314"	"HCD"	"MS2"	"21.4331"	"184.4"	"100.000"	"54.4886"	"17166"	"17166"	"17145"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"196.4"	""	"151.9"	""	"188.3"	""	"387.6"	""	"406.1"	"425.6"	""	"737"	"34"	"35.000"	"28.000"	"0.0154325428745953"	"23"	"0"	"0.0006344"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"452.58102"	"1355.72852"	"1355.72691"	"1.18"	"0.00053"	"7/72"	"7"	"72"	"106765991.067383"	"HCD"	"MS2"	"1.993643"	"68.4"	"8.745"	"55.1795"	"17448"	"17448"	"17431"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.9"	"11.9"	"59.3"	""	"64.3"	""	"140.5"	""	"165.3"	"155.9"	""	"722"	"33"	"35.000"	"28.000"	"0.0168076579761788"	"21"	"0.0001301"	"0.003832"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"452.58102"	"1355.72852"	"1355.72691"	"1.18"	"0.00053"	"6/72"	"6"	"72"	"842941140.953125"	"HCD"	"MS2"	"1.894578"	"99.7"	"1.661"	"54.9412"	"17338"	"17338"	"17323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"95.2"	"21.0"	"83.4"	""	"104.6"	""	"194.5"	""	"229.0"	"222.7"	""	"722"	"32"	"35.000"	"28.000"	"0.0236868441135349"	"24"	"0.0003538"	"0.007001"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"452.58167"	"1355.73044"	"1355.72691"	"2.60"	"0.00118"	"7/72"	"7"	"72"	"639105109.472656"	"HCD"	"MS2"	"1.680815"	"88.9"	"1.985"	"54.7799"	"17285"	"17285"	"17268"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.9"	"16.9"	"70.9"	""	"93.5"	""	"170.7"	"2.1"	"198.8"	"198.3"	""	"726"	"37"	"35.000"	"28.000"	"0.00674383017198286"	"19"	"0.0001301"	"0.004519"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"452.58182"	"1355.73090"	"1355.72691"	"2.94"	"0.00133"	"7/72"	"7"	"72"	"291072502.484375"	"HCD"	"MS2"	"1.584231"	"83.0"	"4.085"	"55.2532"	"17464"	"17464"	"17447"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.3"	"18.5"	"67.2"	""	"71.2"	""	"171.0"	""	"201.0"	"175.8"	""	"724"	"40"	"35.000"	"28.000"	"0.00352134495007262"	"19"	"0"	"0.003228"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGQEIPVNLR"	"[K].tGQEIPVNLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"678.39514"	"1355.78301"	"1355.78443"	"-1.05"	"-0.00071"	"8/92"	"8"	"92"	"5411394.50836182"	"HCD"	"MS2"	"0"	"212.9"	"100.000"	"58.7725"	"18913"	"18913"	"18895"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"316.5"	""	"282.0"	""	"282.7"	""	"349.1"	""	"410.0"	"377.6"	""	"530"	"36"	"34.000"	"27.000"	"0.00671809087081945"	"26"	"0"	"0.0002145"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGQEIPVNLR"	"[K].tGQEIPVNLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"3"	"3"	"0.5789"	"0.0000"	"1"	"1"	"1"	"452.59921"	"1355.78308"	"1355.78443"	"-0.99"	"-0.00045"	"12/92"	"12"	"92"	"1997342.13812256"	"HCD"	"MS2"	"61.34244"	"30.5"	"100.000"	"58.5630"	"18828"	"18828"	"18799"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.0"	""	"38.6"	""	"43.1"	""	"51.1"	""	"61.2"	"63.7"	""	"530"	"19"	"34.000"	"27.000"	"0.307783882667691"	"21"	"0.0003538"	"0.006297"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGQEIPVNLR"	"[K].tGQEIPVNLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"678.39526"	"1355.78325"	"1355.78443"	"-0.87"	"-0.00059"	"7/92"	"7"	"92"	"5100538.83343506"	"HCD"	"MS2"	"0"	"208.3"	"100.000"	"58.9841"	"18985"	"18985"	"18968"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"301.2"	""	"292.6"	""	"263.8"	""	"342.8"	""	"388.4"	"385.5"	""	"530"	"38"	"34.000"	"27.000"	"0.00427805017559019"	"26"	"0"	"9.696E-05"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGQEIPVNLR"	"[K].tGQEIPVNLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"678.39557"	"1355.78386"	"1355.78443"	"-0.42"	"-0.00028"	"6/92"	"6"	"92"	"601504.007141113"	"HCD"	"MS2"	"28.98907"	"49.0"	"100.000"	"59.3178"	"19121"	"19121"	"19096"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.8"	""	"56.4"	""	"97.6"	""	"70.8"	""	"58.9"	"101.7"	""	"535"	"8"	"34.000"	"27.000"	"4.04877633956686"	"13"	"0.008437"	"0.1022"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGQEIPVNLR"	"[K].tGQEIPVNLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"452.59958"	"1355.78418"	"1355.78443"	"-0.18"	"-0.00008"	"12/92"	"12"	"92"	"2311128.82922363"	"HCD"	"MS2"	"32.90504"	"33.4"	"100.000"	"58.8067"	"18912"	"18912"	"18888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.6"	""	"37.2"	""	"35.5"	""	"48.7"	"0.4"	"67.4"	"87.0"	""	"530"	"22"	"34.000"	"27.000"	"0.167203696287251"	"22"	"0.0002479"	"0.006065"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGQEIPVNLR"	"[K].tGQEIPVNLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"678.39594"	"1355.78459"	"1355.78443"	"0.12"	"0.00008"	"14/92"	"14"	"92"	"1449469.92248535"	"HCD"	"MS2"	"17.90224"	"70.7"	"100.000"	"58.6662"	"18855"	"18855"	"18824"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"118.0"	""	"90.1"	""	"83.3"	""	"124.8"	"1.3"	"131.4"	"120.6"	""	"526"	"39"	"34.000"	"27.000"	"0.00308998056949097"	"26"	"0"	"6.956E-05"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGQEIPVNLR"	"[K].tGQEIPVNLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"678.39594"	"1355.78459"	"1355.78443"	"0.12"	"0.00008"	"9/92"	"9"	"92"	"1744804.32794189"	"HCD"	"MS2"	"5.855145"	"79.5"	"100.000"	"58.4664"	"18788"	"18788"	"18767"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"120.1"	""	"121.8"	""	"96.6"	""	"132.5"	"0.3"	"151.4"	"130.7"	""	"526"	"41"	"34.000"	"27.000"	"0.00223334464934551"	"24"	"0"	"6.909E-05"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7714"	"0.0000"	"1"	"1"	"1"	"452.90765"	"1356.70841"	"1356.71093"	"-1.86"	"-0.00084"	"9/72"	"9"	"72"	"1747571.73675537"	"HCD"	"MS2"	"0"	"29.0"	"100.000"	"62.0540"	"20214"	"20214"	"20197"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.4"	""	"31.8"	""	"38.3"	""	"49.5"	""	"67.2"	"60.7"	""	"631"	"35"	"34.000"	"28.000"	"0.0102093798761298"	"23"	"0.0001301"	"0.004132"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"452.90771"	"1356.70859"	"1356.71093"	"-1.72"	"-0.00078"	"7/72"	"7"	"72"	"22811301.7457275"	"HCD"	"MS2"	"2.086304"	"87.8"	"46.609"	"61.7701"	"20102"	"20102"	"20092"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.5"	"15.2"	"69.9"	""	"88.5"	""	"185.6"	"1.0"	"195.4"	"199.7"	""	"631"	"42"	"34.000"	"28.000"	"0.00213795895651168"	"23"	"0"	"0.001577"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8649"	"0.0000"	"1"	"1"	"1"	"452.90775"	"1356.70868"	"1356.71093"	"-1.66"	"-0.00075"	"7/72"	"7"	"72"	"6306623.16723633"	"HCD"	"MS2"	"12.84594"	"70.6"	"100.000"	"56.9392"	"18165"	"18165"	"18147"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.1"	"8.1"	"72.6"	""	"74.8"	""	"135.4"	""	"164.0"	"140.7"	""	"631"	"37"	"34.000"	"28.000"	"0.00696625493267463"	"20"	"0"	"0.001932"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"452.90775"	"1356.70868"	"1356.71093"	"-1.66"	"-0.00075"	"10/72"	"10"	"72"	"8721163.35760498"	"HCD"	"MS2"	"35.42541"	"70.3"	"100.000"	"56.3152"	"17911"	"17911"	"17894"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.3"	"8.8"	"50.5"	""	"65.8"	""	"147.4"	"2.0"	"162.2"	"166.7"	""	"631"	"37"	"34.000"	"28.000"	"0.00587488491617135"	"23"	"0"	"0.002488"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7879"	"0.0000"	"1"	"1"	"1"	"452.90790"	"1356.70914"	"1356.71093"	"-1.32"	"-0.00060"	"10/72"	"10"	"72"	"4739071.07116699"	"HCD"	"MS2"	"14.191"	"49.8"	"100.000"	"57.3972"	"18337"	"18337"	"18323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.2"	"3.1"	"44.5"	""	"43.9"	""	"107.9"	""	"107.4"	"113.2"	""	"639"	"33"	"35.000"	"28.000"	"0.0166138720892458"	"22"	"0"	"0.00226"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"452.90790"	"1356.70914"	"1356.71093"	"-1.32"	"-0.00060"	"7/72"	"7"	"72"	"11771256.8945313"	"HCD"	"MS2"	"24.74789"	"89.4"	"100.000"	"56.5082"	"17975"	"17975"	"17957"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.9"	"13.0"	"58.7"	""	"73.8"	""	"203.3"	""	"217.8"	"210.7"	""	"639"	"42"	"35.000"	"28.000"	"0.00212554773406456"	"21"	"0"	"0.001138"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"452.90790"	"1356.70914"	"1356.71093"	"-1.32"	"-0.00060"	"7/72"	"7"	"72"	"15170541.3477173"	"HCD"	"MS2"	"0"	"127.8"	"100.000"	"61.9213"	"20148"	"20148"	"20141"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"110.8"	"17.3"	"105.4"	""	"131.4"	""	"241.6"	"0.3"	"313.6"	"298.7"	""	"639"	"39"	"35.000"	"28.000"	"0.00402226669068237"	"24"	"0"	"0.00184"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"452.90793"	"1356.70923"	"1356.71093"	"-1.25"	"-0.00057"	"10/72"	"10"	"72"	"1322716.81799316"	"HCD"	"MS2"	"57.96571"	"22.2"	"100.000"	"62.2143"	"20263"	"20263"	"20248"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.2"	"2.7"	"22.0"	""	"28.5"	""	"37.4"	"0.8"	"40.8"	"51.4"	""	"639"	"29"	"35.000"	"28.000"	"0.0365149627965332"	"21"	"0"	"0.002587"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"452.90796"	"1356.70932"	"1356.71093"	"-1.18"	"-0.00054"	"8/72"	"8"	"72"	"531558.739440918"	"HCD"	"MS2"	"42.3205"	"15.3"	"100.000"	"62.4986"	"20377"	"20377"	"20351"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.8"	""	"18.0"	""	"22.9"	""	"26.4"	""	"25.4"	"34.7"	""	"639"	"17"	"35.000"	"28.000"	"0.634557326095681"	"15"	"0.004069"	"0.0449"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8600"	"0.0000"	"1"	"1"	"1"	"452.90796"	"1356.70932"	"1356.71093"	"-1.18"	"-0.00054"	"7/72"	"7"	"72"	"4182530.92144775"	"HCD"	"MS2"	"15.57901"	"47.7"	"100.000"	"57.2316"	"18284"	"18284"	"18265"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.0"	"9.9"	"42.1"	""	"40.6"	""	"106.0"	""	"109.6"	"107.2"	""	"639"	"50"	"35.000"	"28.000"	"0.000291387463174213"	"23"	"0"	"0.0009453"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7955"	"0.0000"	"1"	"1"	"1"	"452.90799"	"1356.70942"	"1356.71093"	"-1.12"	"-0.00051"	"7/72"	"7"	"72"	"5971947.61450195"	"HCD"	"MS2"	"14.94461"	"71.3"	"100.000"	"57.1185"	"18224"	"18224"	"18208"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"93.5"	"4.7"	"70.1"	""	"68.3"	""	"145.0"	""	"152.6"	"144.0"	""	"639"	"44"	"35.000"	"28.000"	"0.00127782347548671"	"25"	"0"	"0.0009383"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"452.90811"	"1356.70978"	"1356.71093"	"-0.85"	"-0.00038"	"7/72"	"7"	"72"	"12163017.6688843"	"HCD"	"MS2"	"28.98825"	"114.4"	"100.000"	"61.6479"	"20036"	"20036"	"20017"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"88.8"	"11.9"	"79.6"	""	"222.9"	""	"185.5"	""	"267.5"	"235.7"	""	"660"	"37"	"35.000"	"28.000"	"0.00633160684421195"	"23"	"0"	"0.001514"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"678.85876"	"1356.71025"	"1356.71093"	"-0.50"	"-0.00034"	"7/72"	"7"	"72"	"3160600.26452637"	"HCD"	"MS2"	"2.542176"	"87.9"	"100.000"	"56.5546"	"18008"	"18008"	"17990"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.6"	""	"59.1"	""	"76.7"	""	"186.9"	""	"228.6"	"220.2"	""	"660"	"47"	"35.000"	"28.000"	"0.000723625628665647"	"27"	"0"	"0.001325"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"452.90829"	"1356.71033"	"1356.71093"	"-0.44"	"-0.00020"	"7/72"	"7"	"72"	"9680245.26104736"	"HCD"	"MS2"	"37.85972"	"98.6"	"100.000"	"61.4898"	"19987"	"19987"	"19969"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.0"	"12.4"	"65.0"	""	"212.9"	""	"163.3"	""	"219.1"	"190.6"	""	"660"	"33"	"35.000"	"28.000"	"0.0164253238043049"	"17"	"0"	"0.002001"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"678.85913"	"1356.71099"	"1356.71093"	"0.04"	"0.00003"	"12/72"	"12"	"72"	"2905959.40686035"	"HCD"	"MS2"	"2.405316"	"84.2"	"100.000"	"56.7041"	"18055"	"18055"	"18036"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.8"	""	"57.4"	""	"71.5"	""	"171.9"	"2.0"	"220.6"	"203.0"	""	"663"	"34"	"35.000"	"28.000"	"0.01181635507308"	"25"	"0"	"0.001166"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"678.85919"	"1356.71111"	"1356.71093"	"0.13"	"0.00009"	"7/72"	"7"	"72"	"2151388.67370605"	"HCD"	"MS2"	"38.64952"	"77.1"	"100.000"	"61.8089"	"20102"	"20102"	"20081"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"85.2"	""	"68.2"	""	"91.9"	""	"149.8"	""	"174.3"	"170.4"	""	"664"	"25"	"35.000"	"28.000"	"0.107928982731964"	"26"	"0.00736"	"0.08738"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"452.90857"	"1356.71115"	"1356.71093"	"0.17"	"0.00007"	"7/72"	"7"	"72"	"59009015.6396484"	"HCD"	"MS2"	"1.789886"	"66.9"	"16.377"	"56.6284"	"18039"	"18039"	"18022"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.2"	"11.7"	"41.4"	""	"55.0"	""	"139.7"	""	"174.7"	"169.1"	""	"673"	"41"	"35.000"	"28.000"	"0.00260606394960548"	"23"	"0"	"0.0009512"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7021"	"0.0000"	"1"	"1"	"1"	"452.90897"	"1356.71234"	"1356.71093"	"1.04"	"0.00047"	"7/72"	"7"	"72"	"55403345.486084"	"HCD"	"MS2"	"1.532472"	"66.8"	"16.869"	"56.8124"	"18100"	"18100"	"18084"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.4"	"13.5"	"41.6"	""	"53.4"	""	"145.0"	""	"173.6"	"154.8"	""	"664"	"47"	"35.000"	"28.000"	"0.000738138883696266"	""	"0"	"0.001128"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHLLGVSDSGK"	"[R].DHLLGVSDSGk.[I]"	"K11(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.8298"	"0.0000"	"1"	"1"	"1"	"452.91489"	"1356.73011"	"1356.73206"	"-1.44"	"-0.00065"	"11/96"	"11"	"96"	"11650531.7955322"	"HCD"	"MS2"	"16.12997"	"337.7"	"100.000"	"41.0865"	"11711"	"11711"	"11693"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"564.2"	""	"591.7"	""	"313.4"	""	"425.1"	""	"397.8"	"908.2"	""	"680"	"47"	"35.000"	"28.000"	"0.000614439202843715"	"24"	"0"	"0.0006053"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHLLGVSDSGK"	"[R].DHLLGVSDSGk.[I]"	"K11(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.91492"	"1356.73020"	"1356.73206"	"-1.37"	"-0.00062"	"10/96"	"10"	"96"	"3595581.74908447"	"HCD"	"MS2"	"17.83024"	"139.2"	"100.000"	"41.6198"	"11918"	"11918"	"11897"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"207.7"	""	"210.3"	""	"151.9"	""	"215.5"	"4.3"	"197.1"	"332.0"	""	"652"	"29"	"35.000"	"28.000"	"0.0454169117760169"	"14"	"0.0001301"	"0.003999"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHLLGVSDSGK"	"[R].DHLLGVSDSGk.[I]"	"K11(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.7246"	"0.0000"	"1"	"1"	"1"	"678.86884"	"1356.73039"	"1356.73206"	"-1.23"	"-0.00083"	"9/96"	"9"	"96"	"995219.913635254"	"HCD"	"MS2"	"0"	"54.4"	"100.000"	"41.0704"	"11705"	"11705"	"11683"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"84.1"	""	"77.7"	""	"40.5"	""	"71.2"	"0.2"	"70.8"	"171.9"	""	"652"	"69"	"35.000"	"28.000"	"4.41791748426437E-06"	""	"0"	"2.745E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHLLGVSDSGK"	"[R].DHLLGVSDSGk.[I]"	"K11(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.8039"	"0.0000"	"1"	"1"	"1"	"452.91541"	"1356.73166"	"1356.73206"	"-0.29"	"-0.00013"	"12/96"	"12"	"96"	"11428769.2055664"	"HCD"	"MS2"	"15.56825"	"330.8"	"100.000"	"41.2641"	"11774"	"11774"	"11763"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"560.3"	""	"610.9"	""	"292.4"	""	"406.8"	""	"374.7"	"890.9"	""	"662"	"51"	"35.000"	"28.000"	"0.00027850179188456"	"25"	"0"	"0.0004251"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHLLGVSDSGK"	"[R].DHLLGVSDSGk.[I]"	"K11(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.6761"	"0.0000"	"1"	"1"	"1"	"678.86957"	"1356.73186"	"1356.73206"	"-0.15"	"-0.00010"	"9/96"	"9"	"96"	"1182610.79632568"	"HCD"	"MS2"	"0"	"66.9"	"100.000"	"41.2846"	"11782"	"11782"	"11763"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"96.3"	""	"98.6"	""	"57.2"	""	"71.3"	""	"77.2"	"236.2"	""	"656"	"71"	"35.000"	"28.000"	"2.63556568076883E-06"	""	"0"	"5.938E-05"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHLLGVSDSGK"	"[R].DHLLGVSDSGk.[I]"	"K11(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.6481"	"0.0000"	"1"	"1"	"1"	"678.87000"	"1356.73271"	"1356.73206"	"0.48"	"0.00033"	"8/96"	"8"	"96"	"365689.000427246"	"HCD"	"MS2"	"0"	"29.0"	"100.000"	"41.3985"	"11838"	"11838"	"11813"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.5"	""	"44.5"	""	"28.2"	""	"36.8"	""	"47.3"	"77.1"	""	"693"	"54"	"35.000"	"28.000"	"0.000124080415456063"	""	"0"	"5.271E-05"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TATDEAYK"	"[K].tATDEAYk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"678.87445"	"1356.74162"	"1356.74112"	"0.37"	"0.00025"	"11/64"	"11"	"64"	"370402.534606934"	"HCD"	"MS2"	"0"	"31.4"	"100.000"	"36.1603"	"9711"	"9711"	"9691"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.1"	""	"26.6"	""	"33.0"	""	"44.6"	"0.8"	"72.6"	"86.2"	""	"691"	"27"	"35.000"	"28.000"	"0.067678083469632"	"18"	"0.0001301"	"0.003827"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAPTAALGQDR"	"[K].qAPTAALGQDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63190"	"Emerin OS=Rattus norvegicus OX=10116 GN=Emd PE=1 SV=1"	"Q63190"	"Emerin OS=Rattus norvegicus OX=10116 GN=Emd PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"678.87488"	"1356.74248"	"1356.74329"	"-0.60"	"-0.00041"	"13/112"	"13"	"112"	"530344.00012207"	"HCD"	"MS2"	"0"	"36.3"	"100.000"	"36.4678"	"9836"	"9836"	"9810"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.9"	""	"36.0"	""	"39.6"	""	"59.9"	"3.8"	"77.1"	"84.9"	""	"691"	"34"	"35.000"	"28.000"	"0.0141074347977945"	"27"	"0.0001301"	"0.004767"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAPTAALGQDR"	"[K].qAPTAALGQDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63190"	"Emerin OS=Rattus norvegicus OX=10116 GN=Emd PE=1 SV=1"	"Q63190"	"Emerin OS=Rattus norvegicus OX=10116 GN=Emd PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"678.87610"	"1356.74492"	"1356.74329"	"1.20"	"0.00081"	"13/112"	"13"	"112"	"933498.469177246"	"HCD"	"MS2"	"0"	"54.0"	"100.000"	"36.7241"	"9934"	"9934"	"9912"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.3"	""	"50.9"	""	"48.6"	""	"94.7"	"1.8"	"133.1"	"126.7"	""	"701"	"33"	"35.000"	"28.000"	"0.0162438145367569"	"24"	"0.0002479"	"0.005344"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APPADGQDK"	"[K].aPPADGQDk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JHB5"	"Translin-associated protein X OS=Rattus norvegicus OX=10116 GN=Tsnax PE=1 SV=1"	"Q9JHB5"	"Translin-associated protein X OS=Rattus norvegicus OX=10116 GN=Tsnax PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"678.88000"	"1356.75273"	"1356.75235"	"0.28"	"0.00019"	"7/74"	"7"	"74"	"916508.032836914"	"HCD"	"MS2"	"45.25962"	"50.2"	"100.000"	"29.3882"	"6957"	"6957"	"6934"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.0"	""	"59.9"	""	"68.2"	""	"77.7"	"0.4"	"97.0"	"86.2"	""	"671"	"36"	"35.000"	"28.000"	"0.00773913681815583"	"22"	"0.007413"	"0.08834"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPVQWQQK"	"[R].vNPVqWQQK.[I]"	"N-Term(TMT6plex); Q5(Deamidated)"	"1"	"1"	"Q91ZV2"	"Discoidin, CUB and LCCL domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Dcbld2 PE=2 SV=1"	"Q91ZV2"	"Discoidin, CUB and LCCL domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Dcbld2 PE=2 SV=1"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"678.88074"	"1356.75420"	"1356.74732"	"5.07"	"0.00344"	"5/80"	"5"	"80"	"146628.918029785"	"HCD"	"MS2"	"11.58366"	"3.0"	"100.000"	"106.5670"	"37116"	"37116"	"37108"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.2"	""	"4.9"	""	"3.5"	""	"4.1"	""	"4.9"	"7.5"	""	"658"	"27"	"35.000"	"28.000"	"0.0590467363227901"	"14"	"0.005369"	"0.06093"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPVQWQQK"	"[R].vNPVqWQQK.[I]"	"N-Term(TMT6plex); Q5(Deamidated)"	"1"	"1"	"Q91ZV2"	"Discoidin, CUB and LCCL domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Dcbld2 PE=2 SV=1"	"Q91ZV2"	"Discoidin, CUB and LCCL domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Dcbld2 PE=2 SV=1"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"678.88159"	"1356.75591"	"1356.74732"	"6.33"	"0.00430"	"4/80"	"4"	"80"	"216643.757141113"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"106.6188"	"37068"	"37068"	"37059"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.5"	""	"6.2"	""	"3.9"	""	"3.6"	""	"7.1"	"7.9"	""	"654"	"25"	"35.000"	"28.000"	"0.102931369871113"	"17"	"0.008641"	"0.1077"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDMAVPDVR"	"[K].iPDmAVPDVR.[L]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"453.24915"	"1357.73288"	"1357.73470"	"-1.34"	"-0.00061"	"7/82"	"7"	"82"	"1390700.29388428"	"HCD"	"MS2"	"48.1422"	"31.1"	"100.000"	"65.7103"	"21679"	"21679"	"21660"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.6"	""	"43.7"	""	"55.6"	""	"50.5"	""	"53.3"	"54.2"	""	"725"	"27"	"35.000"	"28.000"	"0.0695517418492979"	""	"0.000936"	"0.01308"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDMAVPDVR"	"[K].iPDmAVPDVR.[L]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.3636"	"0.0000"	"1"	"1"	"1"	"453.24915"	"1357.73288"	"1357.73470"	"-1.34"	"-0.00061"	"6/82"	"6"	"82"	"1485940.7298584"	"HCD"	"MS2"	"41.09274"	"32.1"	"100.000"	"65.6237"	"21659"	"21659"	"21638"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.2"	""	"44.5"	""	"60.9"	"1.9"	"57.5"	"0.3"	"48.5"	"50.0"	""	"725"	"22"	"35.000"	"28.000"	"0.234589198208861"	"27"	"0.001374"	"0.0174"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDMAVPDVR"	"[K].iPDmAVPDVR.[L]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"1"	"679.37048"	"1357.73369"	"1357.73470"	"-0.75"	"-0.00051"	"8/82"	"8"	"82"	"4325350.46154785"	"HCD"	"MS2"	"5.208888"	"85.3"	"100.000"	"65.4622"	"21594"	"21594"	"21577"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"82.5"	""	"80.0"	""	"77.3"	""	"246.9"	""	"172.0"	"156.5"	""	"718"	"36"	"35.000"	"28.000"	"0.00939927699950615"	""	"0"	"0.001571"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDMAVPDVR"	"[K].iPDmAVPDVR.[L]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.2895"	"0.0000"	"1"	"1"	"1"	"453.24945"	"1357.73380"	"1357.73470"	"-0.67"	"-0.00030"	"7/82"	"7"	"82"	"1703054.07171631"	"HCD"	"MS2"	"40.01255"	"21.5"	"100.000"	"65.3600"	"21536"	"21536"	"21517"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.3"	""	"28.4"	""	"34.6"	""	"43.9"	""	"36.7"	"35.0"	""	"718"	"38"	"35.000"	"28.000"	"0.00547134938613227"	""	"0"	"0.00212"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDMAVPDVR"	"[K].iPDmAVPDVR.[L]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.5116"	"0.0000"	"1"	"1"	"1"	"679.37097"	"1357.73467"	"1357.73470"	"-0.03"	"-0.00002"	"8/82"	"8"	"82"	"1785007.12512207"	"HCD"	"MS2"	"12.738"	"41.6"	"100.000"	"65.2473"	"21490"	"21490"	"21470"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.4"	""	"44.1"	""	"46.1"	""	"106.4"	""	"73.1"	"82.6"	""	"685"	"43"	"35.000"	"28.000"	"0.00180576227537317"	""	"0"	"0.001048"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDMAVPDVR"	"[K].iPDmAVPDVR.[L]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"679.37097"	"1357.73467"	"1357.73470"	"-0.03"	"-0.00002"	"11/82"	"11"	"82"	"4052182.73474121"	"HCD"	"MS2"	"7.639463"	"79.7"	"100.000"	"65.5492"	"21614"	"21614"	"21597"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.0"	""	"73.4"	""	"83.7"	""	"210.6"	"0.7"	"153.2"	"157.5"	""	"685"	"37"	"35.000"	"28.000"	"0.00621814114499799"	""	"0"	"0.003591"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVR"	"[K].vPEmAVPDVR.[I]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.5517"	"0.0000"	"1"	"1"	"1"	"679.37109"	"1357.73491"	"1357.73470"	"0.15"	"0.00010"	"10/82"	"10"	"82"	"3171294.02514648"	"HCD"	"MS2"	"3.816684"	"72.6"	"100.000"	"56.3588"	"17928"	"17928"	"17910"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.0"	""	"62.6"	""	"71.6"	""	"194.5"	"1.4"	"152.5"	"145.0"	""	"686"	"29"	"35.000"	"28.000"	"0.0389308709775604"	"17"	"0.0002479"	"0.005905"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDMAVPDVR"	"[K].iPDmAVPDVR.[L]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.5111"	"0.0000"	"1"	"1"	"1"	"679.37146"	"1357.73564"	"1357.73470"	"0.69"	"0.00047"	"8/82"	"8"	"82"	"1865847.06982422"	"HCD"	"MS2"	"17.55578"	"42.8"	"100.000"	"65.1643"	"21472"	"21472"	"21453"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.8"	""	"45.2"	""	"53.4"	""	"103.1"	"1.0"	"74.7"	"85.0"	""	"680"	"45"	"35.000"	"28.000"	"0.00118434687112244"	""	"0"	"0.00326"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVR"	"[K].vPEmAVPDVR.[I]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"679.37177"	"1357.73625"	"1357.73470"	"1.14"	"0.00078"	"5/82"	"5"	"82"	"3001772.09954834"	"HCD"	"MS2"	"2.941654"	"78.4"	"100.000"	"56.5843"	"18006"	"18006"	"17988"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"73.8"	""	"71.1"	""	"82.2"	""	"179.0"	"1.9"	"167.8"	"169.5"	""	"683"	"27"	"35.000"	"28.000"	"0.0713494628686654"	"18"	"0.002795"	"0.02665"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDITGEPLIR"	"[K].dDITGEPLIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P29410"	"Adenylate kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak2 PE=2 SV=2"	"P29410"	"Adenylate kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak2 PE=2 SV=2"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"679.37897"	"1357.75066"	"1357.75246"	"-1.33"	"-0.00090"	"7/82"	"7"	"82"	"329191.456665039"	"HCD"	"MS2"	"38.45545"	"22.4"	"100.000"	"68.2604"	"22719"	"22719"	"22694"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.2"	""	"24.2"	""	"18.6"	""	"37.3"	""	"51.1"	"58.1"	""	"731"	"22"	"35.000"	"28.000"	"0.2409280587118"	"21"	"0.0002479"	"0.005513"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDITGEPLIR"	"[K].dDITGEPLIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P29410"	"Adenylate kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak2 PE=2 SV=2"	"P29410"	"Adenylate kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak2 PE=2 SV=2"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"679.37933"	"1357.75139"	"1357.75246"	"-0.79"	"-0.00054"	"5/82"	"5"	"82"	"337118.327209473"	"HCD"	"MS2"	"52.7056"	"23.8"	"100.000"	"68.2520"	"22730"	"22730"	"22703"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.4"	""	"28.8"	""	"28.7"	""	"36.0"	""	"61.4"	"50.3"	""	"731"	"13"	"35.000"	"28.000"	"1.93146739523828"	"18"	"0.001211"	"0.01421"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGDPLLEDTR"	"[K].iGDPLLEDTR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"679.37946"	"1357.75163"	"1357.75246"	"-0.61"	"-0.00041"	"8/84"	"8"	"84"	"2292349.56329346"	"HCD"	"MS2"	"17.30325"	"90.9"	"100.000"	"77.4647"	"26468"	"26468"	"26451"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"136.5"	""	"142.9"	""	"126.2"	""	"137.1"	""	"152.1"	"166.0"	""	"727"	"38"	"35.000"	"28.000"	"0.00538895323950554"	"20"	"0"	"0.0002879"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGDPLLEDTR"	"[K].iGDPLLEDTR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"679.37976"	"1357.75224"	"1357.75246"	"-0.16"	"-0.00011"	"6/84"	"6"	"84"	"2764592.1015625"	"HCD"	"MS2"	"0"	"111.4"	"100.000"	"78.1003"	"26714"	"26714"	"26704"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"178.2"	""	"166.2"	""	"171.0"	""	"162.6"	""	"179.9"	"196.3"	""	"756"	"46"	"35.000"	"28.000"	"0.000896379260740106"	"23"	"0"	"7.893E-05"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGDPLLEDTR"	"[K].iGDPLLEDTR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"679.37976"	"1357.75224"	"1357.75246"	"-0.16"	"-0.00011"	"8/84"	"8"	"84"	"2646225.52154541"	"HCD"	"MS2"	"0"	"101.0"	"100.000"	"78.0415"	"26698"	"26698"	"26683"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"150.8"	""	"149.8"	""	"161.1"	""	"144.4"	"2.3"	"175.0"	"172.0"	""	"756"	"44"	"35.000"	"28.000"	"0.00135049132821429"	"23"	"0"	"3.501E-05"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGDPLLEDTR"	"[K].iGDPLLEDTR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"679.38007"	"1357.75286"	"1357.75246"	"0.29"	"0.00020"	"8/84"	"8"	"84"	"16101384"	"HCD"	"MS2"	"0.09589607"	"305.3"	"52.700"	"77.8282"	"26605"	"26605"	"26594"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"485.0"	""	"449.3"	""	"458.0"	""	"463.3"	""	"493.6"	"543.5"	""	"765"	"44"	"35.000"	"28.000"	"0.00137287640001714"	"24"	"0"	"0.0002045"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGDPLLEDTR"	"[K].iGDPLLEDTR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"679.38007"	"1357.75286"	"1357.75246"	"0.29"	"0.00020"	"8/84"	"8"	"84"	"15192902.7108154"	"HCD"	"MS2"	"0"	"408.4"	"76.194"	"77.7393"	"26579"	"26579"	"26565"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"645.1"	""	"595.9"	""	"639.5"	""	"601.3"	""	"667.0"	"719.1"	""	"765"	"42"	"35.000"	"28.000"	"0.00225232698173513"	"22"	"0"	"0.0001854"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGDPLLEDTR"	"[K].iGDPLLEDTR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"679.38013"	"1357.75298"	"1357.75246"	"0.38"	"0.00026"	"8/84"	"8"	"84"	"2566782.14099121"	"HCD"	"MS2"	"13.57797"	"100.1"	"100.000"	"77.5582"	"26495"	"26495"	"26477"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"168.9"	""	"150.9"	""	"150.9"	""	"134.6"	""	"164.1"	"179.2"	""	"765"	"43"	"35.000"	"28.000"	"0.00213614849486838"	"23"	"0"	"7.296E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VNLQGDIVDR"	"[K].vNLQGDIVDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"679.38416"	"1357.76103"	"1357.76369"	"-1.96"	"-0.00133"	"5/94"	"5"	"94"	"488986.85357666"	"HCD"	"MS2"	"55.04163"	"34.9"	"100.000"	"64.1024"	"21045"	"21045"	"21018"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.0"	""	"44.9"	""	"44.0"	""	"54.9"	""	"69.8"	"62.5"	""	"691"	"2"	"35.000"	"28.000"	"20.1580283526579"	"14"	"0.006834"	"0.07977"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLPDSVQIR"	"[R].nSLPDSVQIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"679.38446"	"1357.76164"	"1357.76369"	"-1.51"	"-0.00102"	"8/98"	"8"	"98"	"1501501.68951416"	"HCD"	"MS2"	"33.45708"	"68.4"	"100.000"	"57.6644"	"18446"	"18446"	"18426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"109.8"	""	"93.6"	""	"96.9"	""	"96.8"	""	"132.1"	"123.1"	""	"690"	"45"	"35.000"	"28.000"	"0.000974583591345918"	"23"	"0"	"5.447E-05"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPVLSQTEAR"	"[K].qPVLSQTEAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"679.38477"	"1357.76225"	"1357.76369"	"-1.06"	"-0.00072"	"9/96"	"9"	"96"	"1690497.74963379"	"HCD"	"MS2"	"0"	"71.1"	"100.000"	"35.6966"	"9522"	"9522"	"9507"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.8"	""	"76.7"	""	"78.8"	""	"121.2"	"0.6"	"146.2"	"137.0"	""	"707"	"40"	"35.000"	"28.000"	"0.00324630572856946"	"27"	"0"	"0.0001933"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLQGDIVDR"	"[K].vNLQGDIVDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"679.38495"	"1357.76262"	"1357.76369"	"-0.79"	"-0.00054"	"9/94"	"9"	"94"	"1712005.02850342"	"HCD"	"MS2"	"6.721309"	"81.1"	"100.000"	"64.1991"	"21084"	"21084"	"21065"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"134.6"	""	"88.8"	""	"93.3"	""	"138.7"	"1.3"	"156.4"	"155.9"	""	"705"	"50"	"35.000"	"28.000"	"0.000368263877275332"	""	"0"	"6.041E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPVLSQTEAR"	"[K].qPVLSQTEAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"679.38501"	"1357.76274"	"1357.76369"	"-0.70"	"-0.00048"	"8/96"	"8"	"96"	"1532738.97515869"	"HCD"	"MS2"	"0"	"68.8"	"100.000"	"35.8475"	"9579"	"9579"	"9564"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"109.6"	""	"70.5"	""	"92.0"	""	"113.9"	""	"136.0"	"135.0"	""	"705"	"41"	"35.000"	"28.000"	"0.00262518020801861"	"28"	"0"	"0.0001549"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNQELENLR"	"[R].lNQELENLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811A2"	"Bone marrow stromal antigen 2 OS=Rattus norvegicus OX=10116 GN=Bst2 PE=1 SV=1"	"Q811A2"	"Bone marrow stromal antigen 2 OS=Rattus norvegicus OX=10116 GN=Bst2 PE=1 SV=1"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"679.38507"	"1357.76286"	"1357.76369"	"-0.61"	"-0.00041"	"7/82"	"7"	"82"	"1203396.57366943"	"HCD"	"MS2"	"13.05117"	"66.1"	"100.000"	"71.9857"	"24251"	"24251"	"24230"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"77.5"	""	"54.4"	""	"55.9"	""	"122.4"	""	"151.6"	"167.6"	""	"705"	"42"	"35.000"	"28.000"	"0.00201910600922505"	"28"	"0"	"0.0003891"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLQGDIVDR"	"[K].vNLQGDIVDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"679.38513"	"1357.76299"	"1357.76369"	"-0.52"	"-0.00035"	"9/94"	"9"	"94"	"1532251.64746094"	"HCD"	"MS2"	"15.50053"	"76.2"	"100.000"	"64.2767"	"21101"	"21101"	"21083"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"123.0"	""	"95.5"	""	"85.0"	""	"119.7"	""	"149.5"	"155.1"	""	"705"	"46"	"35.000"	"28.000"	"0.000790968378133425"	"28"	"0"	"2.918E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNQELENLR"	"[R].lNQELENLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811A2"	"Bone marrow stromal antigen 2 OS=Rattus norvegicus OX=10116 GN=Bst2 PE=1 SV=1"	"Q811A2"	"Bone marrow stromal antigen 2 OS=Rattus norvegicus OX=10116 GN=Bst2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"679.38513"	"1357.76299"	"1357.76369"	"-0.52"	"-0.00035"	"7/82"	"7"	"82"	"2830372.42303467"	"HCD"	"MS2"	"0"	"138.5"	"100.000"	"72.2852"	"24374"	"24374"	"24357"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"134.1"	""	"111.2"	""	"128.8"	""	"253.9"	""	"334.2"	"360.2"	""	"705"	"42"	"35.000"	"28.000"	"0.00242191625105017"	""	"0"	"0.0006222"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLQGDIVDR"	"[K].vNLQGDIVDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"679.38525"	"1357.76323"	"1357.76369"	"-0.34"	"-0.00023"	"9/94"	"9"	"94"	"756972.936706543"	"HCD"	"MS2"	"6.899407"	"41.3"	"100.000"	"64.4896"	"21202"	"21202"	"21183"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.2"	""	"47.6"	""	"49.6"	""	"68.4"	""	"77.8"	"79.7"	""	"709"	"43"	"35.000"	"28.000"	"0.00178902429986271"	""	"0"	"0.0001429"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLPDSVQIR"	"[R].nSLPDSVQIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"679.38525"	"1357.76323"	"1357.76369"	"-0.34"	"-0.00023"	"7/98"	"7"	"98"	"1293679.42266846"	"HCD"	"MS2"	"19.84777"	"60.1"	"100.000"	"57.4300"	"18365"	"18365"	"18345"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"92.1"	""	"70.5"	""	"81.6"	""	"90.7"	"0.5"	"113.0"	"121.6"	""	"709"	"41"	"35.000"	"28.000"	"0.00269535665175294"	"21"	"0"	"6.5E-05"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNQELENLR"	"[R].lNQELENLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811A2"	"Bone marrow stromal antigen 2 OS=Rattus norvegicus OX=10116 GN=Bst2 PE=1 SV=1"	"Q811A2"	"Bone marrow stromal antigen 2 OS=Rattus norvegicus OX=10116 GN=Bst2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"679.38525"	"1357.76323"	"1357.76369"	"-0.34"	"-0.00023"	"7/82"	"7"	"82"	"3289822.33599854"	"HCD"	"MS2"	"0"	"151.0"	"100.000"	"72.3675"	"24394"	"24394"	"24378"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"152.0"	""	"113.1"	""	"129.3"	""	"276.6"	""	"361.0"	"410.8"	""	"709"	"42"	"35.000"	"28.000"	"0.00246386120585228"	""	"0"	"0.0006895"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLQGDIVDR"	"[K].vNLQGDIVDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"679.38531"	"1357.76335"	"1357.76369"	"-0.25"	"-0.00017"	"9/94"	"9"	"94"	"694834.234924316"	"HCD"	"MS2"	"0"	"39.1"	"100.000"	"64.5764"	"21224"	"21224"	"21207"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"64.8"	""	"46.7"	""	"49.1"	""	"61.9"	"0.7"	"76.6"	"71.0"	""	"709"	"39"	"35.000"	"28.000"	"0.00401435928767005"	"27"	"0"	"0.0001818"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNQELENLR"	"[R].lNQELENLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811A2"	"Bone marrow stromal antigen 2 OS=Rattus norvegicus OX=10116 GN=Bst2 PE=1 SV=1"	"Q811A2"	"Bone marrow stromal antigen 2 OS=Rattus norvegicus OX=10116 GN=Bst2 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"453.25934"	"1357.76346"	"1357.76369"	"-0.17"	"-0.00008"	"9/82"	"9"	"82"	"348932.522216797"	"HCD"	"MS2"	"36.8346"	"13.3"	"100.000"	"72.2844"	"24360"	"24360"	"24330"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.2"	""	"15.5"	""	"19.2"	""	"21.6"	""	"29.1"	"23.0"	""	"709"	"16"	"35.000"	"28.000"	"0.954149087992091"	"18"	"0.00413"	"0.04508"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNQELENLR"	"[R].lNQELENLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811A2"	"Bone marrow stromal antigen 2 OS=Rattus norvegicus OX=10116 GN=Bst2 PE=1 SV=1"	"Q811A2"	"Bone marrow stromal antigen 2 OS=Rattus norvegicus OX=10116 GN=Bst2 PE=1 SV=1"	"0"	"2"	"2"	"0.6053"	"0.0000"	"1"	"1"	"1"	"679.38538"	"1357.76348"	"1357.76369"	"-0.16"	"-0.00011"	"7/82"	"7"	"82"	"1058699.5100708"	"HCD"	"MS2"	"0"	"60.9"	"100.000"	"72.0841"	"24278"	"24278"	"24250"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.8"	""	"56.2"	""	"47.5"	""	"120.9"	"1.5"	"140.2"	"150.7"	""	"702"	"38"	"35.000"	"28.000"	"0.00516781688353884"	""	"0"	"0.0004732"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPVLSQTEAR"	"[K].qPVLSQTEAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"679.38556"	"1357.76384"	"1357.76369"	"0.11"	"0.00007"	"9/96"	"9"	"96"	"2612684.91680908"	"HCD"	"MS2"	"8.633863"	"113.9"	"100.000"	"35.4052"	"9405"	"9405"	"9380"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"176.4"	""	"121.2"	""	"142.5"	""	"208.8"	""	"217.5"	"213.8"	""	"705"	"38"	"35.000"	"28.000"	"0.00613986922870543"	""	"0"	"0.0002228"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPVLSQTEAR"	"[K].qPVLSQTEAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"679.38556"	"1357.76384"	"1357.76369"	"0.11"	"0.00007"	"9/96"	"9"	"96"	"2897205.45458984"	"HCD"	"MS2"	"0"	"127.3"	"100.000"	"35.5492"	"9458"	"9458"	"9442"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"201.3"	""	"130.9"	""	"163.5"	""	"218.0"	""	"254.5"	"242.3"	""	"705"	"39"	"35.000"	"28.000"	"0.00399171128040534"	""	"0"	"0.000233"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSTPDLEVR"	"[R].vLSTPDLEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7358"	"0.0000"	"1"	"1"	"1"	"679.39716"	"1357.78703"	"1357.78885"	"-1.33"	"-0.00091"	"14/82"	"14"	"82"	"1515026.86279297"	"HCD"	"MS2"	"3.461112"	"62.6"	"100.000"	"78.8843"	"27035"	"27035"	"27022"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"94.1"	""	"84.8"	""	"92.8"	""	"101.8"	"1.3"	"109.5"	"107.8"	""	"741"	"53"	"35.000"	"28.000"	"0.000204074251518202"	""	"0.0001301"	"0.004367"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSTPDLEVR"	"[R].vLSTPDLEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"679.39752"	"1357.78777"	"1357.78885"	"-0.79"	"-0.00054"	"7/82"	"7"	"82"	"997718.137390137"	"HCD"	"MS2"	"36.21922"	"45.7"	"100.000"	"78.5958"	"26919"	"26919"	"26898"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.4"	""	"57.3"	""	"65.4"	""	"69.6"	""	"82.1"	"88.5"	""	"740"	"44"	"35.000"	"28.000"	"0.00134338880264938"	"27"	"0"	"0.003237"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSTPDLEVR"	"[R].vLSTPDLEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7551"	"0.0000"	"1"	"1"	"1"	"679.39758"	"1357.78789"	"1357.78885"	"-0.70"	"-0.00048"	"13/82"	"13"	"82"	"1197271.31481934"	"HCD"	"MS2"	"23.26686"	"54.9"	"100.000"	"78.6536"	"26937"	"26937"	"26922"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.9"	""	"72.2"	""	"84.4"	""	"86.5"	""	"97.5"	"104.1"	""	"740"	"49"	"35.000"	"28.000"	"0.000465802402363842"	"28"	"0"	"0.002237"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSTPDLEVR"	"[R].vLSTPDLEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"679.39795"	"1357.78862"	"1357.78885"	"-0.17"	"-0.00011"	"7/82"	"7"	"82"	"1124636.56970215"	"HCD"	"MS2"	"5.581708"	"49.3"	"100.000"	"78.9442"	"27054"	"27054"	"27039"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.7"	""	"54.1"	""	"58.2"	""	"85.6"	""	"94.3"	"102.1"	""	"753"	"45"	"35.000"	"28.000"	"0.00128459131225656"	"27"	"0"	"0.002577"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDEIDAAIQR"	"[R].vDEIDAAIQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.0952"	"0.0000"	"1"	"1"	"1"	"679.87781"	"1358.74834"	"1358.74771"	"0.46"	"0.00031"	"9/80"	"9"	"80"	"996601.860900879"	"HCD"	"MS2"	"22.15105"	"54.0"	"100.000"	"71.9556"	"24239"	"24239"	"24214"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.1"	""	"50.0"	""	"56.8"	""	"92.6"	""	"122.3"	"126.4"	""	"796"	"21"	"35.000"	"29.000"	"0.332570001256036"	""	"0"	"0.0002664"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IITGGAAAQDGR"	"[K].iITGGAAAQDGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62696"	"Disks large homolog 1 OS=Rattus norvegicus OX=10116 GN=Dlg1 PE=1 SV=1"	"Q62696"	"Disks large homolog 1 OS=Rattus norvegicus OX=10116 GN=Dlg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9792"	"0.0000"	"1"	"1"	"1"	"679.88147"	"1358.75566"	"1358.75894"	"-2.41"	"-0.00164"	"10/108"	"10"	"108"	"809974.869567871"	"HCD"	"MS2"	"0"	"51.0"	"100.000"	"40.1882"	"11347"	"11347"	"11320"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.1"	""	"64.5"	""	"77.0"	""	"82.6"	""	"95.1"	"92.5"	""	"756"	"48"	"35.000"	"28.000"	"0.000581422454034547"	"17"	"0"	"4.22E-05"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IITGGAAAQDGR"	"[K].iITGGAAAQDGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62696"	"Disks large homolog 1 OS=Rattus norvegicus OX=10116 GN=Dlg1 PE=1 SV=1"	"Q62696"	"Disks large homolog 1 OS=Rattus norvegicus OX=10116 GN=Dlg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"679.88208"	"1358.75688"	"1358.75894"	"-1.52"	"-0.00103"	"9/108"	"9"	"108"	"768709.356445313"	"HCD"	"MS2"	"30.65374"	"49.3"	"100.000"	"40.3888"	"11420"	"11420"	"11397"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.0"	""	"69.2"	""	"64.6"	""	"79.8"	""	"86.0"	"87.2"	""	"771"	"38"	"35.000"	"28.000"	"0.00665310507362223"	"19"	"0"	"0.0002149"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFVTTAER"	"[R].gYSFVTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"4"	"P62738"	"Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"680.35797"	"1359.70867"	"1359.71060"	"-1.42"	"-0.00097"	"8/84"	"8"	"84"	"1514940.49151611"	"HCD"	"MS2"	"51.20929"	"96.2"	"100.000"	"58.0330"	"18596"	"18596"	"18575"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"116.1"	""	"117.8"	""	"112.9"	""	"147.4"	""	"192.4"	"229.1"	""	"686"	"37"	"35.000"	"28.000"	"0.00746954451917133"	"25"	"0"	"0.0001304"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFVTTAER"	"[R].gYSFVTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"4"	"P62738"	"Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"680.35858"	"1359.70989"	"1359.71060"	"-0.52"	"-0.00035"	"8/84"	"8"	"84"	"2169958.918396"	"HCD"	"MS2"	"3.441684"	"120.3"	"100.000"	"58.3393"	"18721"	"18721"	"18703"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"118.4"	""	"146.8"	""	"148.6"	""	"168.2"	""	"238.7"	"324.6"	""	"689"	"51"	"35.000"	"28.000"	"0.000267417131678584"	"23"	"0"	"7.246E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFVTTAER"	"[R].gYSFVTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"4"	"P62738"	"Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"680.35883"	"1359.71037"	"1359.71060"	"-0.16"	"-0.00011"	"9/84"	"9"	"84"	"2009407.91564941"	"HCD"	"MS2"	"39.1702"	"117.0"	"100.000"	"57.8742"	"18546"	"18546"	"18527"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"125.1"	""	"138.0"	""	"142.5"	""	"184.6"	"0.1"	"226.3"	"295.3"	""	"692"	"39"	"35.000"	"28.000"	"0.00425672994701084"	"25"	"0"	"4.65E-05"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFVTTAER"	"[R].gYSFVTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"4"	"P62738"	"Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"680.35950"	"1359.71172"	"1359.71060"	"0.82"	"0.00056"	"8/84"	"8"	"84"	"1674604.40313721"	"HCD"	"MS2"	"3.522207"	"97.3"	"100.000"	"58.1809"	"18672"	"18672"	"18655"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.0"	""	"111.3"	""	"114.8"	""	"131.2"	""	"211.9"	"271.2"	""	"713"	"51"	"35.000"	"28.000"	"0.000307651852278925"	"23"	"0"	"5.516E-05"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLENYDAIR"	"[R].hLENYDAIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y78"	"Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Rattus norvegicus OX=10116 GN=Uchl3 PE=1 SV=1"	"Q91Y78"	"Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Rattus norvegicus OX=10116 GN=Uchl3 PE=1 SV=1"	"0"	"3"	"3"	"0.6585"	"0.0000"	"1"	"1"	"1"	"453.91150"	"1359.71994"	"1359.72183"	"-1.39"	"-0.00063"	"8/80"	"8"	"80"	"5465179.40454102"	"HCD"	"MS2"	"39.6328"	"94.9"	"100.000"	"38.8090"	"10784"	"10784"	"10764"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"131.1"	""	"115.7"	""	"136.3"	""	"145.7"	"6.2"	"189.1"	"175.6"	""	"750"	"41"	"35.000"	"28.000"	"0.00323616955412614"	""	"0"	"0.002452"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLENYDAIR"	"[R].hLENYDAIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y78"	"Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Rattus norvegicus OX=10116 GN=Uchl3 PE=1 SV=1"	"Q91Y78"	"Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Rattus norvegicus OX=10116 GN=Uchl3 PE=1 SV=1"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"453.91202"	"1359.72150"	"1359.72183"	"-0.24"	"-0.00011"	"7/80"	"7"	"80"	"5535298.79510498"	"HCD"	"MS2"	"33.3597"	"97.8"	"100.000"	"39.0121"	"10858"	"10858"	"10837"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"155.3"	""	"115.3"	""	"139.6"	""	"157.7"	"7.8"	"171.5"	"179.5"	""	"753"	"46"	"35.000"	"28.000"	"0.00104415501940142"	"28"	"0"	"0.002191"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVGWNELEGR"	"[R].aVGWNELEGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P61459"	"Pterin-4-alpha-carbinolamine dehydratase OS=Rattus norvegicus OX=10116 GN=Pcbd1 PE=1 SV=2"	"P61459"	"Pterin-4-alpha-carbinolamine dehydratase OS=Rattus norvegicus OX=10116 GN=Pcbd1 PE=1 SV=2"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"680.36493"	"1359.72258"	"1359.72183"	"0.55"	"0.00038"	"9/86"	"9"	"86"	"677250.801513672"	"HCD"	"MS2"	"41.95048"	"39.0"	"100.000"	"70.6859"	"23708"	"23708"	"23685"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.2"	""	"38.0"	""	"49.4"	""	"50.1"	""	"78.9"	"106.5"	""	"740"	"28"	"35.000"	"28.000"	"0.0560017661921397"	"19"	"0"	"0.0004421"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVGWNELEGR"	"[R].aVGWNELEGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P61459"	"Pterin-4-alpha-carbinolamine dehydratase OS=Rattus norvegicus OX=10116 GN=Pcbd1 PE=1 SV=2"	"P61459"	"Pterin-4-alpha-carbinolamine dehydratase OS=Rattus norvegicus OX=10116 GN=Pcbd1 PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"680.36523"	"1359.72319"	"1359.72183"	"1.00"	"0.00068"	"9/86"	"9"	"86"	"611261.481140137"	"HCD"	"MS2"	"51.49188"	"33.1"	"100.000"	"70.5181"	"23654"	"23654"	"23624"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.0"	""	"34.4"	""	"43.9"	""	"45.2"	""	"59.1"	"89.8"	""	"746"	"27"	"35.000"	"28.000"	"0.0740813404174299"	"18"	"0"	"0.00107"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLTPDEEAR"	"[K].vTLTPDEEAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"680.36890"	"1359.73052"	"1359.73173"	"-0.89"	"-0.00060"	"7/84"	"7"	"84"	"9361785.67803955"	"HCD"	"MS2"	"0"	"362.2"	"100.000"	"48.8500"	"14857"	"14857"	"14840"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"682.4"	""	"423.6"	""	"466.9"	""	"603.5"	"2.1"	"591.3"	"655.4"	""	"780"	"39"	"35.000"	"28.000"	"0.00449846770550225"	"24"	"0.0001301"	"0.004982"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLTPDEEAR"	"[K].vTLTPDEEAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"680.36896"	"1359.73064"	"1359.73173"	"-0.80"	"-0.00054"	"7/84"	"7"	"84"	"14012004.7266235"	"HCD"	"MS2"	"0"	"517.0"	"100.000"	"48.5220"	"14736"	"14736"	"14719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"956.7"	""	"579.5"	""	"677.8"	""	"853.8"	""	"863.9"	"960.0"	""	"780"	"41"	"35.000"	"28.000"	"0.0032141386485507"	"24"	"0"	"0.0001212"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLTPDEEAR"	"[K].vTLTPDEEAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"680.36902"	"1359.73076"	"1359.73173"	"-0.71"	"-0.00048"	"7/84"	"7"	"84"	"12632935.1420898"	"HCD"	"MS2"	"0"	"269.6"	"56.331"	"48.8352"	"14864"	"14864"	"14847"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"482.7"	""	"299.6"	""	"354.8"	""	"423.6"	""	"471.6"	"523.0"	""	"778"	"41"	"35.000"	"28.000"	"0.00315463851505144"	"26"	"0.0001301"	"0.003914"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLTPDEEAR"	"[K].vTLTPDEEAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"680.36938"	"1359.73149"	"1359.73173"	"-0.17"	"-0.00012"	"7/84"	"7"	"84"	"19587837.7098389"	"HCD"	"MS2"	"0"	"252.6"	"34.844"	"49.1586"	"14983"	"14983"	"14966"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"456.8"	""	"272.8"	""	"336.6"	""	"408.0"	"2.3"	"431.6"	"482.5"	""	"807"	"44"	"36.000"	"29.000"	"0.00157704301452234"	"24"	"0"	"0.002949"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGSLVENNER"	"[K].lGSLVENNER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"680.37433"	"1359.74138"	"1359.74296"	"-1.16"	"-0.00079"	"9/90"	"9"	"90"	"868199.429504395"	"HCD"	"MS2"	"28.47493"	"68.1"	"100.000"	"57.9592"	"18566"	"18566"	"18543"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.7"	"2.6"	"84.5"	""	"83.6"	""	"107.7"	"1.3"	"127.5"	"148.0"	""	"856"	"33"	"36.000"	"29.000"	"0.0233584364547064"	"23"	"0"	"8.993E-05"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGSLVENNER"	"[K].lGSLVENNER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"680.37482"	"1359.74236"	"1359.74296"	"-0.44"	"-0.00030"	"8/90"	"8"	"90"	"990059.284240723"	"HCD"	"MS2"	"34.35618"	"74.0"	"100.000"	"57.7661"	"18502"	"18502"	"18479"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.9"	""	"90.3"	""	"95.5"	""	"107.1"	""	"141.1"	"164.9"	""	"877"	"30"	"36.000"	"29.000"	"0.0492005092211411"	"23"	"0"	"0.0002464"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"453.91968"	"1359.74448"	"1359.74698"	"-1.84"	"-0.00083"	"8/78"	"8"	"78"	"347222.361999512"	"HCD"	"MS2"	"14.69254"	"12.2"	"100.000"	"74.3746"	"25223"	"25223"	"25201"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.0"	""	"18.5"	""	"17.0"	""	"14.1"	""	"26.2"	"24.8"	""	"876"	"27"	"36.000"	"29.000"	"0.0823140765759832"	"23"	"0.001374"	"0.01659"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"680.37592"	"1359.74455"	"1359.74698"	"-1.79"	"-0.00121"	"12/78"	"12"	"78"	"2317182.97808838"	"HCD"	"MS2"	"3.129571"	"102.7"	"100.000"	"72.4005"	"24421"	"24421"	"24405"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"164.3"	""	"128.7"	""	"109.4"	""	"164.2"	"0.4"	"208.7"	"198.4"	""	"876"	"25"	"36.000"	"29.000"	"0.134733040485643"	"24"	"0"	"0.003732"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"453.91977"	"1359.74475"	"1359.74698"	"-1.64"	"-0.00074"	"9/78"	"9"	"78"	"996453.108398438"	"HCD"	"MS2"	"19.81249"	"25.5"	"100.000"	"72.6374"	"24503"	"24503"	"24483"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.7"	""	"36.6"	""	"33.1"	""	"42.3"	""	"45.5"	"42.8"	""	"876"	"35"	"36.000"	"29.000"	"0.0151870740498209"	"20"	"0.0002479"	"0.005948"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"453.91980"	"1359.74485"	"1359.74698"	"-1.57"	"-0.00071"	"11/78"	"11"	"78"	"2072976.14135742"	"HCD"	"MS2"	"8.730945"	"36.4"	"100.000"	"73.5136"	"24860"	"24860"	"24843"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.6"	""	"55.1"	""	"44.7"	""	"60.1"	""	"64.3"	"61.7"	""	"876"	"29"	"36.000"	"29.000"	"0.0516980438415457"	"15"	"0.000936"	"0.01265"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"680.37622"	"1359.74516"	"1359.74698"	"-1.34"	"-0.00091"	"8/78"	"8"	"78"	"5537866.19000244"	"HCD"	"MS2"	"0"	"212.5"	"100.000"	"72.8540"	"24592"	"24592"	"24575"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"392.3"	""	"318.4"	""	"237.3"	""	"357.3"	"0.7"	"354.8"	"348.2"	""	"873"	"31"	"36.000"	"29.000"	"0.0314763414663335"	"20"	"0"	"0.0003843"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"680.37628"	"1359.74529"	"1359.74698"	"-1.25"	"-0.00085"	"13/78"	"13"	"78"	"6347435.13812256"	"HCD"	"MS2"	"0"	"239.1"	"100.000"	"73.3138"	"24792"	"24792"	"24775"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"465.2"	""	"343.8"	""	"251.4"	""	"397.7"	"4.2"	"390.5"	"408.6"	""	"865"	"37"	"36.000"	"29.000"	"0.00889172682763142"	"21"	"0"	"0.001886"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"453.91995"	"1359.74530"	"1359.74698"	"-1.23"	"-0.00056"	"8/78"	"8"	"78"	"1731101.85205078"	"HCD"	"MS2"	"11.01943"	"31.8"	"100.000"	"73.4775"	"24858"	"24858"	"24839"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.1"	""	"40.8"	""	"34.5"	""	"56.0"	"0.8"	"55.4"	"55.9"	""	"865"	"40"	"36.000"	"29.000"	"0.00485272981485599"	"20"	"0"	"0.002934"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8542"	"0.0000"	"1"	"1"	"1"	"453.91998"	"1359.74540"	"1359.74698"	"-1.17"	"-0.00053"	"9/78"	"9"	"78"	"2053448.78839111"	"HCD"	"MS2"	"12.54002"	"38.4"	"100.000"	"72.9391"	"24626"	"24626"	"24607"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.5"	""	"54.6"	""	"49.0"	""	"64.7"	""	"66.0"	"62.6"	""	"865"	"48"	"36.000"	"29.000"	"0.000647121921260843"	"22"	"0.0002479"	"0.005293"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"453.92004"	"1359.74558"	"1359.74698"	"-1.03"	"-0.00047"	"8/78"	"8"	"78"	"2382083.02502441"	"HCD"	"MS2"	"6.700631"	"43.1"	"100.000"	"73.2296"	"24744"	"24744"	"24731"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"79.4"	""	"62.2"	""	"56.0"	""	"70.4"	"1.2"	"69.5"	"68.9"	""	"865"	"45"	"36.000"	"29.000"	"0.00153103850018586"	"25"	"0.0001301"	"0.004754"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"680.37646"	"1359.74565"	"1359.74698"	"-0.98"	"-0.00066"	"11/78"	"11"	"78"	"2555059.92327881"	"HCD"	"MS2"	"0"	"104.7"	"100.000"	"72.5633"	"24473"	"24473"	"24456"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"175.4"	""	"137.1"	""	"126.5"	""	"177.7"	"0.8"	"186.1"	"187.9"	""	"875"	"23"	"36.000"	"29.000"	"0.211825410818043"	"20"	"0.0003538"	"0.007294"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"453.92014"	"1359.74585"	"1359.74698"	"-0.83"	"-0.00038"	"9/78"	"9"	"78"	"1274952.34716797"	"HCD"	"MS2"	"13.78024"	"29.4"	"100.000"	"72.5549"	"24483"	"24483"	"24465"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.0"	""	"39.9"	""	"43.3"	""	"42.4"	""	"49.4"	"51.3"	""	"876"	"34"	"36.000"	"29.000"	"0.0161612188173726"	"20"	"0.0006732"	"0.008434"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9268"	"0.0000"	"1"	"1"	"1"	"453.92014"	"1359.74585"	"1359.74698"	"-0.83"	"-0.00038"	"9/78"	"9"	"78"	"2397785.42211914"	"HCD"	"MS2"	"11.90339"	"42.4"	"100.000"	"73.1684"	"24732"	"24732"	"24715"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"72.8"	""	"62.0"	""	"52.1"	""	"69.2"	""	"76.5"	"70.9"	""	"876"	"41"	"36.000"	"29.000"	"0.00343142183531601"	"18"	"0.0001301"	"0.004459"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"680.37659"	"1359.74590"	"1359.74698"	"-0.80"	"-0.00054"	"6/78"	"6"	"78"	"468518.657470703"	"HCD"	"MS2"	"5.090365"	"27.0"	"100.000"	"74.7898"	"25390"	"25390"	"25375"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.0"	""	"36.0"	""	"30.2"	""	"47.3"	""	"46.0"	"51.6"	""	"876"	"25"	"36.000"	"29.000"	"0.128965667560386"	"20"	"0.0001301"	"0.004129"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"453.92017"	"1359.74594"	"1359.74698"	"-0.76"	"-0.00035"	"9/78"	"9"	"78"	"2367153.16516113"	"HCD"	"MS2"	"7.499799"	"39.6"	"100.000"	"72.8800"	"24616"	"24616"	"24593"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.7"	""	"63.3"	""	"43.1"	""	"68.3"	""	"66.3"	"65.0"	""	"875"	"46"	"36.000"	"29.000"	"0.00119668006775919"	"19"	"0"	"0.001611"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"680.37665"	"1359.74602"	"1359.74698"	"-0.71"	"-0.00048"	"8/78"	"8"	"78"	"4812956.49194336"	"HCD"	"MS2"	"0"	"180.6"	"100.000"	"73.6044"	"24910"	"24910"	"24893"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"353.5"	""	"255.2"	""	"190.4"	""	"302.6"	"1.0"	"297.3"	"308.1"	""	"872"	"45"	"36.000"	"29.000"	"0.00141086834421318"	"22"	"0"	"0.000142"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"680.37671"	"1359.74614"	"1359.74698"	"-0.62"	"-0.00042"	"8/78"	"8"	"78"	"5993587.15722656"	"HCD"	"MS2"	"0.3018357"	"227.6"	"100.000"	"73.4743"	"24844"	"24844"	"24827"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"444.6"	""	"329.7"	""	"228.8"	""	"391.5"	"1.5"	"391.6"	"364.7"	""	"872"	"42"	"36.000"	"29.000"	"0.00253213286039292"	"22"	"0"	"0.0001624"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"680.37671"	"1359.74614"	"1359.74698"	"-0.62"	"-0.00042"	"12/78"	"12"	"78"	"6783552.69158936"	"HCD"	"MS2"	"0"	"257.9"	"100.000"	"73.0093"	"24669"	"24669"	"24652"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"509.6"	""	"345.6"	""	"279.1"	""	"441.1"	"0.4"	"422.7"	"440.1"	""	"872"	"38"	"36.000"	"29.000"	"0.00621564910810554"	"24"	"0"	"0.0002554"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"680.37671"	"1359.74614"	"1359.74698"	"-0.62"	"-0.00042"	"12/78"	"12"	"78"	"6051743.97027588"	"HCD"	"MS2"	"0"	"231.9"	"100.000"	"72.7073"	"24546"	"24546"	"24529"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"452.3"	""	"341.2"	""	"244.9"	""	"381.7"	""	"378.8"	"398.2"	""	"872"	"30"	"36.000"	"29.000"	"0.0446155744634409"	"19"	"0"	"0.0004882"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"680.37683"	"1359.74639"	"1359.74698"	"-0.44"	"-0.00030"	"8/78"	"8"	"78"	"2765204.2802124"	"HCD"	"MS2"	"0"	"113.2"	"100.000"	"74.0668"	"25084"	"25084"	"25070"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"209.1"	""	"172.3"	""	"123.3"	""	"199.9"	""	"186.1"	"181.1"	""	"880"	"38"	"36.000"	"29.000"	"0.00747227207083167"	"20"	"0"	"0.001162"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"680.37689"	"1359.74651"	"1359.74698"	"-0.35"	"-0.00024"	"8/78"	"8"	"78"	"804258.38079834"	"HCD"	"MS2"	"2.526817"	"41.5"	"100.000"	"74.4991"	"25273"	"25273"	"25255"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.2"	""	"51.6"	""	"47.5"	""	"64.8"	""	"75.5"	"74.5"	""	"880"	"27"	"36.000"	"29.000"	"0.0888081200019887"	"22"	"0.0003538"	"0.006523"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"680.37701"	"1359.74675"	"1359.74698"	"-0.17"	"-0.00011"	"14/78"	"14"	"78"	"2959926.6887207"	"HCD"	"MS2"	"0"	"124.1"	"100.000"	"73.8973"	"25029"	"25029"	"25014"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"241.2"	""	"181.7"	""	"133.2"	""	"188.2"	"0.6"	"213.0"	"216.4"	""	"879"	"39"	"36.000"	"29.000"	"0.00555851624713571"	"21"	"0"	"0.002085"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"680.37701"	"1359.74675"	"1359.74698"	"-0.17"	"-0.00011"	"8/78"	"8"	"78"	"4409588.72314453"	"HCD"	"MS2"	"0"	"171.1"	"100.000"	"73.7787"	"24968"	"24968"	"24953"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"314.1"	""	"258.3"	""	"179.7"	""	"303.3"	""	"278.1"	"287.7"	""	"879"	"50"	"36.000"	"29.000"	"0.000414914755127663"	"22"	"0"	"4.189E-05"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"680.37708"	"1359.74687"	"1359.74698"	"-0.08"	"-0.00005"	"5/78"	"5"	"78"	"402189.338317871"	"HCD"	"MS2"	"18.75646"	"25.6"	"100.000"	"74.9661"	"25444"	"25444"	"25425"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.1"	""	"33.9"	""	"33.1"	""	"40.3"	""	"45.3"	"52.4"	""	"873"	"28"	"36.000"	"29.000"	"0.0682313946012777"	"21"	"0"	"0.002272"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"680.37708"	"1359.74687"	"1359.74698"	"-0.08"	"-0.00005"	"8/78"	"8"	"78"	"6874803.32293701"	"HCD"	"MS2"	"0.2098256"	"267.4"	"100.000"	"73.1606"	"24717"	"24717"	"24700"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"500.6"	""	"413.4"	""	"287.7"	""	"456.1"	""	"430.3"	"440.9"	""	"873"	"48"	"36.000"	"29.000"	"0.000666782584420919"	"22"	"0"	"0.000157"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"680.37714"	"1359.74700"	"1359.74698"	"0.01"	"0.00001"	"8/78"	"8"	"78"	"1576841.57568359"	"HCD"	"MS2"	"0"	"72.6"	"100.000"	"74.3597"	"25203"	"25203"	"25185"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"128.4"	""	"106.9"	""	"73.1"	""	"125.8"	"1.6"	"122.1"	"129.5"	""	"873"	"32"	"36.000"	"29.000"	"0.0301289674376266"	"18"	"0.0001301"	"0.004695"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"680.37720"	"1359.74712"	"1359.74698"	"0.10"	"0.00007"	"8/78"	"8"	"78"	"868044.668701172"	"HCD"	"MS2"	"0"	"42.3"	"100.000"	"74.6460"	"25319"	"25319"	"25301"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.2"	""	"55.2"	""	"39.6"	""	"75.7"	""	"70.8"	"83.0"	""	"893"	"30"	"36.000"	"29.000"	"0.0464324354042675"	"19"	"0"	"0.002241"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"680.37720"	"1359.74712"	"1359.74698"	"0.10"	"0.00007"	"8/78"	"8"	"78"	"1641572.93377686"	"HCD"	"MS2"	"0"	"77.0"	"100.000"	"74.2086"	"25155"	"25155"	"25137"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"135.2"	""	"110.7"	""	"86.7"	""	"126.9"	""	"134.0"	"135.8"	""	"893"	"34"	"36.000"	"29.000"	"0.0197615708259913"	"23"	"0.0001301"	"0.004883"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLGGEIIPR"	"[K].emLGGEIIPR.[S]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"680.37793"	"1359.74858"	"1359.75035"	"-1.30"	"-0.00089"	"7/82"	"7"	"82"	"677118.501953125"	"HCD"	"MS2"	"42.45496"	"40.7"	"100.000"	"65.9047"	"21774"	"21774"	"21749"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.7"	""	"46.1"	""	"50.1"	""	"86.6"	""	"72.0"	"80.3"	""	"886"	"12"	"36.000"	"29.000"	"2.782298529543"	"14"	"0.007872"	"0.09668"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAADPLASK"	"[K].eAADPLASk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"680.39667"	"1359.78606"	"1359.78840"	"-1.72"	"-0.00117"	"7/78"	"7"	"78"	"1181879.67956543"	"HCD"	"MS2"	"0"	"85.2"	"100.000"	"52.8294"	"16480"	"16480"	"16455"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"130.5"	""	"95.0"	""	"106.7"	""	"155.0"	""	"160.8"	"165.7"	""	"862"	"38"	"36.000"	"29.000"	"0.00610207119161501"	"26"	"0"	"0.001046"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAADPLASK"	"[K].eAADPLASk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"3"	"3"	"0.4167"	"0.0000"	"1"	"1"	"1"	"453.93390"	"1359.78714"	"1359.78840"	"-0.93"	"-0.00042"	"9/78"	"9"	"78"	"1139455.48791504"	"HCD"	"MS2"	"43.19073"	"51.9"	"100.000"	"52.9811"	"16542"	"16542"	"16517"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"69.6"	""	"70.2"	""	"76.9"	""	"73.5"	""	"98.8"	"107.1"	""	"848"	"12"	"36.000"	"29.000"	"2.4966970987077"	"20"	"0.0008629"	"0.01111"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAADPLASK"	"[K].eAADPLASk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"680.39728"	"1359.78728"	"1359.78840"	"-0.83"	"-0.00056"	"8/78"	"8"	"78"	"1737599.10327148"	"HCD"	"MS2"	"43.71703"	"112.3"	"100.000"	"52.8562"	"16502"	"16502"	"16481"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"140.5"	""	"117.1"	""	"138.7"	""	"170.2"	"1.7"	"253.4"	"246.4"	""	"848"	"23"	"36.000"	"29.000"	"0.230869124805187"	"21"	"0"	"0.001301"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAADPLASK"	"[K].eAADPLASk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6512"	"0.0000"	"1"	"1"	"1"	"680.39734"	"1359.78740"	"1359.78840"	"-0.74"	"-0.00050"	"8/78"	"8"	"78"	"1502358.43414307"	"HCD"	"MS2"	"0"	"107.0"	"100.000"	"52.5616"	"16382"	"16382"	"16360"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"166.1"	""	"126.4"	""	"128.1"	""	"184.2"	"2.3"	"206.4"	"200.2"	""	"848"	"43"	"36.000"	"29.000"	"0.00212503387057964"	""	"0"	"0.0004192"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAADPLASK"	"[K].eAADPLASk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"680.39771"	"1359.78813"	"1359.78840"	"-0.20"	"-0.00013"	"7/78"	"7"	"78"	"1936503.73461914"	"HCD"	"MS2"	"39.09187"	"130.7"	"100.000"	"53.1240"	"16600"	"16600"	"16579"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"169.8"	""	"141.5"	""	"160.4"	""	"192.2"	"0.7"	"286.5"	"291.4"	""	"855"	"27"	"36.000"	"29.000"	"0.0770790084217466"	"29"	"0"	"0.0007677"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAADPLASK"	"[K].eAADPLASk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"3"	"3"	"0.5294"	"0.0000"	"1"	"1"	"1"	"453.93481"	"1359.78989"	"1359.78840"	"1.09"	"0.00050"	"9/78"	"9"	"78"	"1384017.54040527"	"HCD"	"MS2"	"58.43744"	"61.0"	"100.000"	"52.6512"	"16419"	"16419"	"16392"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.4"	""	"77.7"	""	"79.5"	""	"87.9"	"1.1"	"118.9"	"124.4"	""	"896"	"17"	"36.000"	"29.000"	"0.973370128130957"	"21"	"0.0003538"	"0.006101"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.5306"	"0.0000"	"1"	"1"	"1"	"680.87378"	"1360.74028"	"1360.74223"	"-1.43"	"-0.00097"	"6/84"	"6"	"84"	"494927.018371582"	"HCD"	"MS2"	"2.940538"	"20.4"	"100.000"	"81.1737"	"27955"	"27955"	"27940"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.8"	""	"20.1"	""	"31.9"	""	"38.5"	""	"40.8"	"41.2"	""	"999"	"49"	"36.000"	"29.000"	"0.000603303010635837"	"27"	"0"	"0.002247"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"1"	"680.87402"	"1360.74077"	"1360.74223"	"-1.07"	"-0.00073"	"10/84"	"10"	"84"	"184093.403442383"	"HCD"	"MS2"	"16.88854"	"9.2"	"100.000"	"81.7748"	"28196"	"28196"	"28178"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.9"	""	"12.5"	""	"12.9"	""	"15.2"	""	"19.1"	"15.2"	""	"983"	"40"	"36.000"	"29.000"	"0.00452400964516684"	"26"	"0.005119"	"0.05862"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.3030"	"0.0000"	"1"	"1"	"1"	"680.87402"	"1360.74077"	"1360.74223"	"-1.07"	"-0.00073"	"5/84"	"5"	"84"	"271710.309326172"	"HCD"	"MS2"	"46.63387"	"14.3"	"100.000"	"80.8783"	"27837"	"27837"	"27811"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.0"	""	"16.4"	""	"12.8"	""	"35.1"	""	"29.2"	"28.5"	""	"983"	"33"	"36.000"	"29.000"	"0.0239620252885815"	"27"	"0.007808"	"0.09616"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"680.87421"	"1360.74114"	"1360.74223"	"-0.80"	"-0.00055"	"5/84"	"5"	"84"	"139124.634521484"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"84.1397"	"29132"	"29132"	"29113"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.5"	""	"11.2"	""	"10.2"	""	"15.7"	""	"15.0"	"11.7"	""	"992"	"28"	"36.000"	"29.000"	"0.0702233714858713"	"24"	"0.008437"	"0.1016"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.5306"	"0.0000"	"1"	"1"	"1"	"680.87421"	"1360.74114"	"1360.74223"	"-0.80"	"-0.00055"	"6/84"	"6"	"84"	"440298.950012207"	"HCD"	"MS2"	"12.71833"	"17.7"	"100.000"	"81.4814"	"28080"	"28080"	"28065"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.3"	""	"18.1"	""	"20.4"	""	"30.3"	""	"36.0"	"38.9"	""	"992"	"49"	"36.000"	"29.000"	"0.000573431672127282"	"28"	"0"	"0.001303"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.5102"	"0.0000"	"1"	"1"	"1"	"680.87427"	"1360.74126"	"1360.74223"	"-0.71"	"-0.00049"	"6/84"	"6"	"84"	"473502.6171875"	"HCD"	"MS2"	"0"	"18.0"	"100.000"	"81.1884"	"27963"	"27963"	"27949"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.6"	""	"20.3"	""	"21.5"	""	"33.8"	""	"39.1"	"38.1"	""	"983"	"49"	"36.000"	"29.000"	"0.000581464924638919"	"27"	"0"	"0.002179"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.2963"	"0.0000"	"1"	"1"	"1"	"680.87433"	"1360.74138"	"1360.74223"	"-0.62"	"-0.00043"	"8/84"	"8"	"84"	"153193.815673828"	"HCD"	"MS2"	"14.65999"	"7.8"	"100.000"	"83.9015"	"29036"	"29036"	"29012"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.8"	""	"9.6"	""	"12.2"	""	"13.4"	""	"12.8"	"14.1"	""	"983"	"27"	"36.000"	"29.000"	"0.0998903470875153"	"26"	"0.006685"	"0.07508"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.5435"	"0.0000"	"1"	"1"	"1"	"680.87439"	"1360.74150"	"1360.74223"	"-0.54"	"-0.00036"	"6/84"	"6"	"84"	"432752.46081543"	"HCD"	"MS2"	"0"	"18.0"	"100.000"	"81.4602"	"28069"	"28069"	"28059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.9"	""	"17.2"	""	"21.9"	""	"32.9"	""	"41.5"	"30.6"	""	"985"	"46"	"36.000"	"29.000"	"0.00124281428044668"	"29"	"0"	"0.0004378"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"680.87476"	"1360.74224"	"1360.74223"	"0.00"	"0.00000"	"10/84"	"10"	"84"	"186748.362670898"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"81.7665"	"28195"	"28195"	"28180"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.4"	""	"11.7"	""	"10.7"	""	"14.4"	""	"17.6"	"14.8"	""	"983"	"44"	"36.000"	"29.000"	"0.00178042433721808"	"28"	"0.003189"	"0.0319"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESEALPEK"	"[K].eSEALPEk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.3810"	"0.0000"	"1"	"1"	"1"	"454.26068"	"1360.76749"	"1360.77242"	"-3.62"	"-0.00164"	"7/68"	"7"	"68"	"2451354.94683838"	"HCD"	"MS2"	"19.97197"	"103.8"	"100.000"	"45.8664"	"13654"	"13654"	"13627"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"130.8"	""	"121.5"	""	"123.5"	""	"168.9"	""	"226.1"	"215.8"	""	"996"	"21"	"36.000"	"29.000"	"0.411366898889436"	"27"	"0.008728"	"0.1122"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQGPPPAGLLQ"	"[K].gPQGPPPAGLLQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"680.89136"	"1360.77544"	"1360.77862"	"-2.34"	"-0.00159"	"5/108"	"5"	"108"	"178535.552978516"	"HCD"	"MS2"	"19.03017"	"9.3"	"100.000"	"80.6259"	"27735"	"27735"	"27714"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.8"	""	"7.9"	""	"6.7"	""	"22.9"	""	"19.0"	"19.7"	""	"998"	"23"	"36.000"	"29.000"	"0.278676627173678"	"19"	"0.003967"	"0.04233"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQGPPPAGLLQ"	"[K].gPQGPPPAGLLQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"680.89215"	"1360.77703"	"1360.77862"	"-1.17"	"-0.00080"	"6/108"	"6"	"108"	"272792.245178223"	"HCD"	"MS2"	"36.94874"	"9.0"	"100.000"	"80.3307"	"27617"	"27617"	"27594"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.9"	""	"10.9"	""	"11.2"	""	"17.5"	""	"17.2"	"15.5"	""	"979"	"28"	"36.000"	"29.000"	"0.0823668952893993"	"23"	"0.00263"	"0.02567"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQGPPPAGLLQ"	"[K].gPQGPPPAGLLQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"680.89264"	"1360.77800"	"1360.77862"	"-0.45"	"-0.00031"	"7/108"	"7"	"108"	"223100.006164551"	"HCD"	"MS2"	"29.36567"	"10.0"	"100.000"	"80.0329"	"27497"	"27497"	"27477"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.4"	""	"10.8"	""	"14.0"	""	"13.7"	""	"18.4"	"20.0"	""	"975"	"29"	"36.000"	"29.000"	"0.0583411009012281"	"22"	"0.001374"	"0.01634"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQGPPPAGLLQ"	"[K].gPQGPPPAGLLQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"680.89282"	"1360.77837"	"1360.77862"	"-0.18"	"-0.00012"	"5/108"	"5"	"108"	"257400.943786621"	"HCD"	"MS2"	"21.45502"	"7.5"	"100.000"	"80.3072"	"27604"	"27604"	"27581"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.2"	""	"8.9"	""	"12.4"	""	"9.9"	""	"11.7"	"18.7"	""	"978"	"22"	"36.000"	"29.000"	"0.305006334550903"	"20"	"0.002973"	"0.02877"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQGPPPAGLLQ"	"[K].gPQGPPPAGLLQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"680.89362"	"1360.77995"	"1360.77862"	"0.98"	"0.00067"	"6/108"	"6"	"108"	"238755.155212402"	"HCD"	"MS2"	"38.1647"	"10.7"	"100.000"	"79.9956"	"27478"	"27478"	"27457"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.7"	""	"15.6"	""	"13.4"	""	"20.0"	""	"16.7"	"22.6"	""	"949"	"20"	"36.000"	"29.000"	"0.463699061343532"	"15"	"0.001134"	"0.0139"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEIQAGAK"	"[K].eGEIQAGAk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"680.89514"	"1360.78301"	"1360.78365"	"-0.47"	"-0.00032"	"12/76"	"12"	"76"	"450193.706481934"	"HCD"	"MS2"	"0"	"39.1"	"100.000"	"37.9130"	"10412"	"10412"	"10397"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.9"	""	"38.5"	""	"38.9"	""	"67.5"	""	"96.7"	"84.9"	""	"969"	"33"	"36.000"	"29.000"	"0.0226617675953648"	"23"	"0"	"0.0007121"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEIQAGAK"	"[K].eGEIQAGAk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"680.89569"	"1360.78411"	"1360.78365"	"0.33"	"0.00023"	"8/76"	"8"	"76"	"433488.268493652"	"HCD"	"MS2"	"0"	"37.5"	"100.000"	"37.7009"	"10333"	"10333"	"10315"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.2"	""	"26.5"	""	"46.1"	""	"62.7"	""	"93.5"	"85.1"	""	"974"	"46"	"36.000"	"29.000"	"0.00136939570440429"	"24"	"0"	"0.0002867"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEVEVLK"	"[R].eGEVEVLk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.5476"	"0.0000"	"1"	"1"	"1"	"680.90717"	"1360.80705"	"1360.80880"	"-1.28"	"-0.00087"	"7/64"	"7"	"64"	"5503152.69299316"	"HCD"	"MS2"	"0"	"394.3"	"100.000"	"59.8838"	"19346"	"19346"	"19338"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"375.8"	""	"431.3"	""	"387.3"	""	"1038.1"	""	"847.3"	"671.2"	""	"839"	"42"	"36.000"	"29.000"	"0.00251033664127804"	""	"0.0001301"	"0.004353"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEVEVLK"	"[R].eGEVEVLk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.5814"	"0.0000"	"1"	"1"	"1"	"680.90747"	"1360.80766"	"1360.80880"	"-0.84"	"-0.00057"	"7/64"	"7"	"64"	"5193760.55413818"	"HCD"	"MS2"	"0"	"379.6"	"100.000"	"60.1370"	"19433"	"19433"	"19426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"338.9"	""	"414.0"	""	"376.0"	""	"990.5"	""	"828.6"	"659.6"	""	"832"	"43"	"36.000"	"29.000"	"0.00186678082212183"	""	"0.0002479"	"0.005656"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEVEVLK"	"[R].eGEVEVLk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.5750"	"0.0000"	"1"	"1"	"1"	"680.90753"	"1360.80779"	"1360.80880"	"-0.75"	"-0.00051"	"7/64"	"7"	"64"	"1935691.52655029"	"HCD"	"MS2"	"0"	"160.4"	"100.000"	"59.6121"	"19254"	"19254"	"19243"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"168.4"	""	"186.1"	""	"163.6"	""	"408.9"	""	"330.7"	"265.6"	""	"832"	"40"	"36.000"	"29.000"	"0.00414088653618235"	""	"0.0001301"	"0.003901"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEVEVLK"	"[R].eGEVEVLk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.5778"	"0.0000"	"1"	"1"	"1"	"680.90826"	"1360.80925"	"1360.80880"	"0.33"	"0.00022"	"7/64"	"7"	"64"	"2305813.62713623"	"HCD"	"MS2"	"0"	"180.6"	"100.000"	"59.8718"	"19346"	"19346"	"19328"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"157.0"	""	"209.4"	""	"181.4"	""	"496.3"	"0.1"	"386.6"	"284.1"	""	"832"	"45"	"36.000"	"29.000"	"0.00130645161665251"	""	"0"	"0.003105"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEVEVLK"	"[R].eGEVEVLk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"3"	"680.90839"	"1360.80950"	"1360.80880"	"0.51"	"0.00035"	"7/64"	"7"	"64"	"651127.725708008"	"HCD"	"MS2"	"0"	"57.9"	"100.000"	"60.1746"	"19454"	"19454"	"19441"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.1"	""	"65.6"	""	"57.3"	""	"132.2"	""	"123.2"	"115.7"	""	"832"	"17"	"36.000"	"29.000"	"0.893497477238302"	"24"	"0.00263"	"0.02554"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"EVQDAVIK"	"[K].eVqDAVIk.[L]"	"N-Term(TMT6plex); Q3(Deamidated); K8(TMT6plex)"	"0"	"1"	""	""	"M0R8U1"	"Dynein heavy chain 5, axonemal (Fragment) OS=Rattus norvegicus OX=10116 GN=Dnah5 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"680.90851"	"1360.80974"	"1360.80880"	"0.69"	"0.00047"	"10/72"	"10"	"72"	"698018.740112305"	"HCD"	"MS2"	"12.07517"	"54.3"	"100.000"	"63.6208"	"20849"	"20849"	"20827"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.1"	""	"73.2"	""	"64.9"	""	"84.3"	"0.6"	"121.6"	"100.9"	""	"832"	"21"	"36.000"	"29.000"	"0.31123851221264"	""	"0.005254"	"0.05948"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EVENVLAK"	"[R].eVEnVLAk.[H]"	"N-Term(TMT6plex); N4(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q9JJH5"	"6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Rattus norvegicus OX=10116 GN=Pfkfb2 PE=1 SV=1"	"Q9JJH5"	"6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Rattus norvegicus OX=10116 GN=Pfkfb2 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"3"	"3"	"5"	"680.90851"	"1360.80974"	"1360.80880"	"0.69"	"0.00047"	"10/68"	"10"	"68"	"698018.740112305"	"HCD"	"MS2"	"12.07517"	"54.3"	"100.000"	"63.6208"	"20849"	"20849"	"20827"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.1"	""	"73.2"	""	"64.9"	""	"84.3"	"0.6"	"121.6"	"100.9"	""	"832"	"21"	"36.000"	"29.000"	"0.317024868170571"	""	"0.006769"	"0.07918"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"EVQDAVIK"	"[K].eVqDAVIk.[L]"	"N-Term(TMT6plex); Q3(Deamidated); K8(TMT6plex)"	"0"	"1"	""	""	"M0R8U1"	"Dynein heavy chain 5, axonemal (Fragment) OS=Rattus norvegicus OX=10116 GN=Dnah5 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"680.90869"	"1360.81011"	"1360.80880"	"0.96"	"0.00065"	"7/72"	"7"	"72"	"694865.836120605"	"HCD"	"MS2"	"9.447628"	"58.7"	"100.000"	"63.7283"	"20878"	"20878"	"20859"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.6"	""	"76.5"	""	"65.4"	""	"106.5"	"1.0"	"128.0"	"111.3"	""	"832"	"19"	"36.000"	"29.000"	"0.468914141769012"	"29"	"0.005427"	"0.06161"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EVENVLAK"	"[R].eVEnVLAk.[H]"	"N-Term(TMT6plex); N4(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q9JJH5"	"6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Rattus norvegicus OX=10116 GN=Pfkfb2 PE=1 SV=1"	"Q9JJH5"	"6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Rattus norvegicus OX=10116 GN=Pfkfb2 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"3"	"3"	"5"	"680.90869"	"1360.81011"	"1360.80880"	"0.96"	"0.00065"	"10/68"	"10"	"68"	"694865.836120605"	"HCD"	"MS2"	"9.447628"	"58.7"	"100.000"	"63.7283"	"20878"	"20878"	"20859"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.6"	""	"76.5"	""	"65.4"	""	"106.5"	"1.0"	"128.0"	"111.3"	""	"832"	"19"	"36.000"	"29.000"	"0.535911813504344"	"29"	"0.00736"	"0.08634"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"454.56708"	"1361.68668"	"1361.68986"	"-2.34"	"-0.00106"	"11/84"	"11"	"84"	"3030763.17443848"	"HCD"	"MS2"	"44.62335"	"68.5"	"100.000"	"47.8343"	"14455"	"14455"	"14436"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"84.0"	""	"96.4"	""	"95.5"	""	"95.3"	""	"136.3"	"142.9"	""	"661"	"46"	"35.000"	"28.000"	"0.000851474142389351"	"23"	"0"	"0.001313"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"454.56726"	"1361.68723"	"1361.68986"	"-1.93"	"-0.00088"	"11/84"	"11"	"84"	"2665396.62121582"	"HCD"	"MS2"	"29.31213"	"71.6"	"100.000"	"48.2567"	"14615"	"14615"	"14590"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"84.8"	""	"106.9"	""	"99.8"	""	"123.5"	""	"127.3"	"136.7"	""	"660"	"36"	"35.000"	"28.000"	"0.00773595509055574"	"22"	"0"	"0.002568"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"681.34760"	"1361.68791"	"1361.68986"	"-1.43"	"-0.00097"	"8/84"	"8"	"84"	"3037522.41674805"	"HCD"	"MS2"	"8.785324"	"169.5"	"100.000"	"42.3644"	"12233"	"12233"	"12204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"238.6"	""	"220.0"	""	"222.4"	""	"273.6"	"1.2"	"305.3"	"345.3"	""	"664"	"56"	"35.000"	"28.000"	"8.49450514452675E-05"	"22"	"0"	"9.398E-05"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9464"	"0.0000"	"1"	"1"	"1"	"681.34784"	"1361.68840"	"1361.68986"	"-1.07"	"-0.00073"	"8/84"	"8"	"84"	"3073219.3102417"	"HCD"	"MS2"	"0"	"164.8"	"100.000"	"42.4843"	"12271"	"12271"	"12245"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"226.3"	""	"226.8"	""	"222.1"	""	"256.6"	""	"297.9"	"334.3"	""	"664"	"56"	"35.000"	"28.000"	"8.39726934820121E-05"	"19"	"0"	"9.405E-05"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"681.34808"	"1361.68889"	"1361.68986"	"-0.71"	"-0.00049"	"8/84"	"8"	"84"	"12180051.5032959"	"HCD"	"MS2"	"0"	"541.1"	"100.000"	"47.6574"	"14383"	"14383"	"14365"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"706.1"	""	"835.5"	""	"817.1"	""	"795.0"	"3.6"	"942.2"	"1025.6"	""	"683"	"59"	"35.000"	"28.000"	"3.92094461741186E-05"	"24"	"0"	"0.0001058"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"681.34821"	"1361.68913"	"1361.68986"	"-0.53"	"-0.00036"	"8/84"	"8"	"84"	"1796524.69696045"	"HCD"	"MS2"	"3.22132"	"113.8"	"100.000"	"42.7741"	"12389"	"12389"	"12370"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"161.6"	""	"152.8"	""	"148.4"	""	"161.6"	""	"225.4"	"230.0"	""	"679"	"58"	"35.000"	"28.000"	"5.0797200524406E-05"	"20"	"0"	"2.722E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"681.34821"	"1361.68913"	"1361.68986"	"-0.53"	"-0.00036"	"8/84"	"8"	"84"	"1635526.46173096"	"HCD"	"MS2"	"0"	"109.8"	"100.000"	"42.6867"	"12364"	"12364"	"12346"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"160.3"	""	"128.8"	""	"144.0"	""	"182.5"	"1.9"	"206.1"	"217.3"	""	"679"	"54"	"35.000"	"28.000"	"0.00012073683265417"	"20"	"0"	"4.273E-05"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"681.34827"	"1361.68926"	"1361.68986"	"-0.44"	"-0.00030"	"8/84"	"8"	"84"	"6709401.27896118"	"HCD"	"MS2"	"0"	"324.6"	"100.000"	"47.9398"	"14486"	"14486"	"14474"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"417.9"	""	"523.0"	""	"468.6"	""	"471.3"	""	"573.8"	"623.2"	""	"679"	"59"	"35.000"	"28.000"	"3.89798154498192E-05"	"24"	"0"	"3.823E-05"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"681.34833"	"1361.68938"	"1361.68986"	"-0.35"	"-0.00024"	"6/84"	"6"	"84"	"374113.54095459"	"HCD"	"MS2"	"0"	"35.8"	"100.000"	"50.5585"	"15554"	"15554"	"15534"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.2"	""	"45.6"	""	"45.6"	""	"61.0"	""	"77.9"	"73.7"	""	"679"	"21"	"35.000"	"28.000"	"0.292307378866672"	"16"	"0.00736"	"0.08469"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"681.34839"	"1361.68950"	"1361.68986"	"-0.26"	"-0.00018"	"7/84"	"7"	"84"	"756378.688232422"	"HCD"	"MS2"	"40.15446"	"65.1"	"100.000"	"50.4879"	"15536"	"15536"	"15515"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.3"	""	"91.4"	""	"90.4"	""	"111.9"	""	"119.7"	"118.1"	""	"680"	"30"	"35.000"	"28.000"	"0.0310083685381009"	"20"	"0"	"0.002466"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8475"	"0.0000"	"1"	"1"	"1"	"681.34839"	"1361.68950"	"1361.68986"	"-0.26"	"-0.00018"	"8/84"	"8"	"84"	"23229667.378418"	"HCD"	"MS2"	"0"	"294.7"	"26.575"	"48.2549"	"14627"	"14627"	"14610"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"359.4"	"2.8"	"402.4"	""	"420.7"	""	"427.8"	""	"544.4"	"638.6"	""	"680"	"59"	"35.000"	"28.000"	"3.9037223130894E-05"	"25"	"0"	"8.466E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"681.34839"	"1361.68950"	"1361.68986"	"-0.26"	"-0.00018"	"8/84"	"8"	"84"	"6147465.43670654"	"HCD"	"MS2"	"10.23415"	"307.9"	"100.000"	"48.8153"	"14842"	"14842"	"14824"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"434.8"	""	"439.4"	""	"433.9"	""	"474.2"	""	"542.3"	"598.9"	""	"680"	"36"	"35.000"	"28.000"	"0.00869919201547919"	"19"	"0"	"0.000231"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"681.34851"	"1361.68974"	"1361.68986"	"-0.09"	"-0.00006"	"7/84"	"7"	"84"	"623126.297058105"	"HCD"	"MS2"	"21.37291"	"45.9"	"100.000"	"50.1614"	"15404"	"15404"	"15378"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.2"	""	"58.2"	""	"66.0"	""	"78.5"	"0.1"	"87.6"	"84.9"	""	"680"	"31"	"35.000"	"28.000"	"0.0249734715173419"	"16"	"0"	"0.001901"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"681.34857"	"1361.68987"	"1361.68986"	"0.00"	"0.00000"	"8/84"	"8"	"84"	"672511.56842041"	"HCD"	"MS2"	"42.02198"	"50.0"	"100.000"	"51.4280"	"15908"	"15908"	"15883"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.7"	""	"46.9"	""	"58.5"	""	"73.3"	"3.3"	"135.6"	"91.2"	""	"680"	"20"	"35.000"	"28.000"	"0.32770186803215"	"22"	"0.0001301"	"0.003939"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"681.34857"	"1361.68987"	"1361.68986"	"0.00"	"0.00000"	"8/84"	"8"	"84"	"689579.525390625"	"HCD"	"MS2"	"15.33121"	"49.7"	"100.000"	"50.2456"	"15426"	"15426"	"15406"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"64.2"	""	"68.1"	""	"85.3"	""	"68.2"	"2.4"	"97.2"	"85.9"	""	"680"	"30"	"35.000"	"28.000"	"0.0343937014448365"	"16"	"0"	"0.0008632"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.34869"	"1361.69011"	"1361.68986"	"0.18"	"0.00013"	"9/84"	"9"	"84"	"2323420.77911377"	"HCD"	"MS2"	"36.79205"	"121.8"	"100.000"	"49.4758"	"15112"	"15112"	"15089"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"155.8"	""	"164.4"	""	"166.3"	""	"179.5"	"6.5"	"232.7"	"250.5"	""	"699"	"21"	"35.000"	"28.000"	"0.260283824880143"	"14"	"0"	"0.003201"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"681.34906"	"1361.69084"	"1361.68986"	"0.72"	"0.00049"	"8/84"	"8"	"84"	"864824.30682373"	"HCD"	"MS2"	"32.33114"	"54.6"	"100.000"	"47.6039"	"14350"	"14350"	"14321"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.5"	""	"68.5"	""	"61.8"	""	"91.1"	"1.0"	"112.6"	"107.5"	""	"697"	"26"	"35.000"	"28.000"	"0.0916648395175541"	"19"	"0"	"0.0002692"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"681.34912"	"1361.69097"	"1361.68986"	"0.81"	"0.00055"	"9/84"	"9"	"84"	"828173.613464355"	"HCD"	"MS2"	"48.15176"	"56.7"	"100.000"	"51.1625"	"15811"	"15811"	"15783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.1"	""	"60.8"	""	"85.1"	""	"77.8"	"1.9"	"151.6"	"99.4"	""	"696"	"27"	"35.000"	"28.000"	"0.0745725929189779"	"23"	"0"	"0.0007034"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8644"	"0.0000"	"1"	"1"	"1"	"681.34973"	"1361.69219"	"1361.68986"	"1.71"	"0.00116"	"8/84"	"8"	"84"	"299063083.927734"	"HCD"	"MS2"	"0"	"415.8"	"2.924"	"48.2293"	"14604"	"14604"	"14590"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"551.5"	""	"618.8"	""	"632.4"	""	"600.4"	"1.2"	"728.0"	"806.4"	""	"698"	"59"	"35.000"	"28.000"	"4.02555186979561E-05"	"24"	"0"	"0.000102"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"681.34998"	"1361.69267"	"1361.68986"	"2.07"	"0.00141"	"8/84"	"8"	"84"	"46444224.8786621"	"HCD"	"MS2"	"0"	"382.3"	"17.623"	"48.5093"	"14718"	"14718"	"14702"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"476.9"	""	"541.2"	""	"554.5"	""	"542.1"	""	"707.8"	"806.4"	""	"701"	"59"	"35.000"	"28.000"	"4.05217340888331E-05"	"24"	"0"	"6.808E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8475"	"0.0000"	"1"	"1"	"1"	"681.35089"	"1361.69451"	"1361.68986"	"3.41"	"0.00232"	"8/84"	"8"	"84"	"289229735.316406"	"HCD"	"MS2"	"0.02472485"	"416.1"	"3.266"	"47.9514"	"14503"	"14503"	"14488"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"537.7"	""	"617.5"	""	"612.9"	""	"579.0"	"2.4"	"749.1"	"844.7"	""	"708"	"59"	"35.000"	"28.000"	"4.08322453268666E-05"	"25"	"0"	"0.0001961"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATNFLMHEK"	"[M].aTNFLMHEk.[I]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"681.35754"	"1361.70781"	"1361.70849"	"-0.50"	"-0.00034"	"5/88"	"5"	"88"	"301726.449462891"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"75.6634"	"25727"	"25727"	"25701"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.4"	""	"25.7"	""	"27.7"	""	"34.1"	""	"32.9"	"33.9"	""	"816"	"29"	"36.000"	"29.000"	"0.0468446677570729"	"16"	"0.001036"	"0.01354"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATNFLMHEK"	"[M].aTNFLMHEk.[I]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"681.35767"	"1361.70806"	"1361.70849"	"-0.32"	"-0.00022"	"6/88"	"6"	"88"	"290665.047424316"	"HCD"	"MS2"	"0"	"18.3"	"100.000"	"75.5725"	"25700"	"25700"	"25675"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.9"	""	"23.2"	""	"23.3"	""	"24.9"	""	"35.2"	"37.0"	""	"803"	"44"	"36.000"	"29.000"	"0.00155842371945245"	"20"	"0"	"0.002266"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATNFLMHEK"	"[M].aTNFLMHEk.[I]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.35803"	"1361.70879"	"1361.70849"	"0.22"	"0.00015"	"5/88"	"5"	"88"	"372891.988342285"	"HCD"	"MS2"	"41.90362"	"27.3"	"100.000"	"75.9935"	"25861"	"25861"	"25839"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.3"	""	"31.8"	""	"32.2"	""	"59.9"	""	"54.2"	"52.2"	""	"810"	"19"	"36.000"	"29.000"	"0.47802985743895"	"14"	"0.0023"	"0.02401"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATNFLMHEK"	"[M].aTNFLMHEk.[I]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.35809"	"1361.70891"	"1361.70849"	"0.31"	"0.00021"	"5/88"	"5"	"88"	"386649.263671875"	"HCD"	"MS2"	"51.8505"	"28.9"	"100.000"	"75.9047"	"25835"	"25835"	"25808"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.0"	""	"33.3"	""	"35.1"	""	"56.4"	""	"54.7"	"55.7"	""	"830"	"20"	"36.000"	"29.000"	"0.379356995210154"	"14"	"0.006308"	"0.07139"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HASGEGAMK"	"[K].hASGEGAmk.[I]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"3"	"3"	"0.9268"	"0.0000"	"1"	"1"	"1"	"454.57913"	"1361.72284"	"1361.72476"	"-1.40"	"-0.00064"	"7/68"	"7"	"68"	"1146842.41473389"	"HCD"	"MS2"	"18.79885"	"53.0"	"100.000"	"19.1637"	"2855"	"2855"	"2837"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.2"	""	"58.8"	""	"68.8"	""	"110.4"	"0.2"	"105.1"	"94.0"	""	"936"	"41"	"36.000"	"29.000"	"0.00343752490297529"	"18"	"0"	"0.0002791"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HASGEGAMK"	"[K].hASGEGAmk.[I]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"454.57916"	"1361.72293"	"1361.72476"	"-1.34"	"-0.00061"	"7/68"	"7"	"68"	"1147896.84747314"	"HCD"	"MS2"	"13.18997"	"55.5"	"100.000"	"19.2216"	"2875"	"2875"	"2856"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"73.1"	""	"69.8"	""	"78.6"	""	"108.0"	"2.0"	"98.2"	"95.8"	""	"936"	"46"	"36.000"	"29.000"	"0.00114880377254059"	"15"	"0"	"0.0002086"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEEPINFR"	"[R].dLEEPINFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63621"	"Interleukin-1 receptor accessory protein OS=Rattus norvegicus OX=10116 GN=Il1rap PE=2 SV=1"	"Q63621"	"Interleukin-1 receptor accessory protein OS=Rattus norvegicus OX=10116 GN=Il1rap PE=2 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"681.36633"	"1361.72539"	"1361.72625"	"-0.63"	"-0.00043"	"6/74"	"6"	"74"	"626891.522033691"	"HCD"	"MS2"	"3.725771"	"35.0"	"100.000"	"77.4036"	"26432"	"26432"	"26416"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.4"	""	"44.3"	""	"40.2"	""	"60.1"	"0.5"	"68.9"	"67.8"	""	"914"	"44"	"36.000"	"29.000"	"0.00182774750640822"	"28"	"0"	"0.002611"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEEPINFR"	"[R].dLEEPINFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63621"	"Interleukin-1 receptor accessory protein OS=Rattus norvegicus OX=10116 GN=Il1rap PE=2 SV=1"	"Q63621"	"Interleukin-1 receptor accessory protein OS=Rattus norvegicus OX=10116 GN=Il1rap PE=2 SV=1"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"681.36676"	"1361.72624"	"1361.72625"	"0.00"	"0.00000"	"6/74"	"6"	"74"	"542721.64276123"	"HCD"	"MS2"	"17.36461"	"31.3"	"100.000"	"77.2961"	"26399"	"26399"	"26380"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.2"	""	"46.2"	""	"32.1"	""	"54.0"	""	"67.3"	"52.1"	""	"914"	"41"	"36.000"	"29.000"	"0.00368057947627974"	"26"	"0"	"0.002578"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQVYQEPNR"	"[K].vQVYQEPNR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O08618"	"Phosphoribosyl pyrophosphate synthase-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Prpsap2 PE=1 SV=1"	"O08618"	"Phosphoribosyl pyrophosphate synthase-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Prpsap2 PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"681.37335"	"1361.73943"	"1361.73748"	"1.43"	"0.00097"	"5/78"	"5"	"78"	"490339.696899414"	"HCD"	"MS2"	"0"	"32.5"	"100.000"	"40.0969"	"11301"	"11301"	"11273"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.9"	""	"35.4"	""	"41.8"	""	"50.1"	""	"62.8"	"65.1"	""	"922"	"28"	"36.000"	"29.000"	"0.0745934897353453"	"19"	"0.001374"	"0.01613"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQVYQEPNR"	"[K].vQVYQEPNR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O08618"	"Phosphoribosyl pyrophosphate synthase-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Prpsap2 PE=1 SV=1"	"O08618"	"Phosphoribosyl pyrophosphate synthase-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Prpsap2 PE=1 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"681.37335"	"1361.73943"	"1361.73748"	"1.43"	"0.00097"	"8/78"	"8"	"78"	"521952.665466309"	"HCD"	"MS2"	"0"	"33.0"	"100.000"	"39.9077"	"11233"	"11233"	"11204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"51.3"	""	"37.8"	""	"47.2"	""	"51.2"	"0.3"	"59.0"	"65.8"	""	"922"	"29"	"36.000"	"29.000"	"0.0639294437109941"	"19"	"0.0001301"	"0.004438"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAEEIGEK"	"[K].qAEEIGEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"681.37671"	"1361.74614"	"1361.76767"	"-15.81"	"-0.01076"	"7/78"	"7"	"78"	"993650.006103516"	"HCD"	"MS2"	"42.46323"	"77.5"	"100.000"	"38.2667"	"10555"	"10555"	"10533"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"133.2"	""	"100.2"	""	"90.5"	""	"109.2"	""	"146.9"	"160.5"	""	"949"	"37"	"36.000"	"29.000"	"0.0102857559773694"	"29"	"0.0023"	"0.02331"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVGGGGQGPPPPR"	"[R].gVGGGGQGPPPPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG48"	"Protein PRRC2A OS=Rattus norvegicus OX=10116 GN=Prrc2a PE=1 SV=1"	"Q6MG48"	"Protein PRRC2A OS=Rattus norvegicus OX=10116 GN=Prrc2a PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"681.37738"	"1361.74748"	"1361.74871"	"-0.90"	"-0.00061"	"7/110"	"7"	"110"	"191074.566955566"	"HCD"	"MS2"	"31.18568"	"17.6"	"100.000"	"26.9141"	"5950"	"5950"	"5921"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.4"	""	"23.8"	""	"24.2"	""	"27.8"	"0.9"	"34.6"	"36.0"	""	"971"	"12"	"36.000"	"29.000"	"3.17825862509662"	"16"	"0.005874"	"0.06671"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTSNLNDVR"	"[R].tLTSNLNDVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V885"	"Collectin-12 OS=Rattus norvegicus OX=10116 GN=Colec12 PE=2 SV=1"	"Q4V885"	"Collectin-12 OS=Rattus norvegicus OX=10116 GN=Colec12 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"681.38251"	"1361.75774"	"1361.75861"	"-0.64"	"-0.00044"	"7/96"	"7"	"96"	"495774.180297852"	"HCD"	"MS2"	"48.07134"	"35.6"	"100.000"	"52.5211"	"16354"	"16354"	"16332"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.2"	""	"35.0"	""	"41.2"	""	"55.8"	""	"75.2"	"85.3"	""	"952"	"28"	"36.000"	"29.000"	"0.0823392586986388"	"21"	"0.0002479"	"0.005173"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEEAAQK"	"[R].vEEEAAQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"681.38690"	"1361.76653"	"1361.76767"	"-0.84"	"-0.00057"	"7/62"	"7"	"62"	"1204102.97857666"	"HCD"	"MS2"	"15.57446"	"93.4"	"100.000"	"36.4552"	"9824"	"9824"	"9806"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"124.2"	""	"115.1"	""	"130.8"	""	"173.5"	""	"166.1"	"177.0"	""	"906"	"42"	"36.000"	"29.000"	"0.0026127520791669"	""	"0"	"0.002771"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEEAAQK"	"[R].vEEEAAQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.4054"	"0.0000"	"1"	"1"	"1"	"681.38721"	"1361.76714"	"1361.76767"	"-0.39"	"-0.00026"	"7/62"	"7"	"62"	"1276826.42645264"	"HCD"	"MS2"	"27.0389"	"100.1"	"100.000"	"36.3003"	"9768"	"9768"	"9747"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"132.1"	""	"112.4"	""	"131.4"	""	"186.0"	"2.5"	"192.7"	"192.5"	""	"920"	"37"	"36.000"	"29.000"	"0.0102744322250204"	""	"0"	"0.003542"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAEEIGEK"	"[K].qAEEIGEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"681.38806"	"1361.76885"	"1361.76767"	"0.87"	"0.00059"	"7/78"	"7"	"78"	"697142.79296875"	"HCD"	"MS2"	"46.14213"	"62.1"	"100.000"	"38.3126"	"10574"	"10574"	"10546"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.7"	""	"87.1"	""	"65.6"	""	"102.3"	""	"114.8"	"132.0"	""	"910"	"35"	"36.000"	"29.000"	"0.0140932578114354"	"28"	"0"	"0.002778"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTGNEGQLK"	"[R].gTGNEGQLk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"681.39417"	"1361.78105"	"1361.77890"	"1.58"	"0.00108"	"7/80"	"7"	"80"	"487779.39654541"	"HCD"	"MS2"	"0"	"45.3"	"100.000"	"32.0329"	"8040"	"8040"	"8013"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"73.6"	""	"58.3"	""	"67.5"	""	"67.0"	"0.5"	"88.9"	"72.9"	""	"883"	"28"	"36.000"	"29.000"	"0.0627958159514725"	""	"0.006189"	"0.07058"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGNVAGDSK"	"[R].rGNVAGDSk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"1"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"681.39868"	"1361.79009"	"1361.79013"	"-0.03"	"-0.00002"	"8/82"	"8"	"82"	"3928017.03131104"	"HCD"	"MS2"	"0"	"213.9"	"100.000"	"20.7264"	"3451"	"3451"	"3433"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"369.2"	""	"270.1"	""	"321.6"	""	"318.5"	""	"373.8"	"372.8"	""	"887"	"19"	"36.000"	"29.000"	"0.503377296750671"	"22"	"0.001374"	"0.01612"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDQTIEK"	"[K].aVDQTIEk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"681.40509"	"1361.80290"	"1361.80405"	"-0.84"	"-0.00057"	"14/72"	"14"	"72"	"2182868.30249023"	"HCD"	"MS2"	"0"	"165.2"	"100.000"	"47.1553"	"14166"	"14166"	"14145"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"246.1"	""	"188.6"	""	"205.7"	""	"279.3"	""	"314.3"	"334.1"	""	"815"	"47"	"36.000"	"29.000"	"0.000835848587871418"	"27"	"0"	"0.003069"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESIENLAK"	"[R].eSIENLAk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08460"	"Nidogen-1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Nid1 PE=1 SV=2"	"P08460"	"Nidogen-1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Nid1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"681.40521"	"1361.80315"	"1361.80405"	"-0.66"	"-0.00045"	"12/68"	"12"	"68"	"444085.309692383"	"HCD"	"MS2"	"22.1347"	"40.3"	"100.000"	"61.1145"	"19834"	"19834"	"19810"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.6"	""	"43.6"	""	"44.8"	""	"71.8"	"0.0"	"80.8"	"93.6"	""	"815"	"36"	"36.000"	"29.000"	"0.00975276170735196"	"27"	"0.0001301"	"0.004068"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESIENLAK"	"[R].eSIENLAk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08460"	"Nidogen-1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Nid1 PE=1 SV=2"	"P08460"	"Nidogen-1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Nid1 PE=1 SV=2"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"681.40540"	"1361.80351"	"1361.80405"	"-0.39"	"-0.00027"	"7/68"	"7"	"68"	"440467.153747559"	"HCD"	"MS2"	"33.65884"	"41.6"	"100.000"	"61.3119"	"19899"	"19899"	"19873"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.5"	"1.7"	"52.2"	""	"45.9"	""	"71.7"	""	"83.0"	"86.2"	""	"843"	"32"	"36.000"	"29.000"	"0.0264726598239813"	"22"	"0.0001301"	"0.004151"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDQTIEK"	"[K].aVDQTIEk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"681.40540"	"1361.80351"	"1361.80405"	"-0.39"	"-0.00027"	"7/72"	"7"	"72"	"1472109.57641602"	"HCD"	"MS2"	"0"	"119.3"	"100.000"	"46.9649"	"14100"	"14100"	"14078"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"189.8"	""	"133.7"	""	"142.7"	""	"192.6"	""	"236.1"	"238.1"	""	"843"	"45"	"36.000"	"29.000"	"0.00138610962414227"	"29"	"0"	"0.002768"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQVSEAIK"	"[K].eQVSEAIk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"681.40582"	"1361.80437"	"1361.80405"	"0.23"	"0.00016"	"7/76"	"7"	"76"	"475513.961730957"	"HCD"	"MS2"	"0"	"38.9"	"100.000"	"47.4797"	"14299"	"14299"	"14273"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.6"	""	"48.8"	""	"55.3"	""	"67.0"	""	"71.9"	"80.0"	""	"851"	"18"	"36.000"	"29.000"	"0.739434252632859"	"22"	"0.002973"	"0.0302"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDQTIEK"	"[K].aVDQTIEk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.6596"	"0.0000"	"1"	"1"	"1"	"681.40588"	"1361.80449"	"1361.80405"	"0.32"	"0.00022"	"14/72"	"14"	"72"	"1208472.3104248"	"HCD"	"MS2"	"0"	"95.6"	"100.000"	"46.6384"	"13967"	"13967"	"13949"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"144.9"	""	"115.0"	""	"103.8"	""	"172.5"	"0.6"	"181.7"	"188.4"	""	"829"	"47"	"36.000"	"29.000"	"0.000789813467595765"	""	"0"	"0.001313"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDQTIEK"	"[K].aVDQTIEk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.6809"	"0.0000"	"1"	"1"	"1"	"681.40643"	"1361.80559"	"1361.80405"	"1.13"	"0.00077"	"14/72"	"14"	"72"	"968601.439575195"	"HCD"	"MS2"	"0"	"83.4"	"100.000"	"46.8610"	"14046"	"14046"	"14028"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"129.7"	""	"107.8"	""	"111.1"	""	"134.2"	""	"164.5"	"143.5"	""	"828"	"47"	"36.000"	"29.000"	"0.000829851419329177"	""	"0"	"0.001177"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDLVQEDQR"	"[K].mDLVQEDQR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63487"	"Ras-related GTP-binding protein B OS=Rattus norvegicus OX=10116 GN=RragB PE=1 SV=1"	"Q63487; Q63486"	"Ras-related GTP-binding protein B OS=Rattus norvegicus OX=10116 GN=RragB PE=1 SV=1; Ras-related GTP-binding protein A OS=Rattus norvegicus OX=10116 GN=Rraga PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"681.84753"	"1362.68779"	"1362.68848"	"-0.51"	"-0.00034"	"4/82"	"4"	"82"	"800118.768554688"	"HCD"	"MS2"	"100"	"56.3"	"100.000"	"53.6071"	"16798"	"16798"	"16770"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.8"	""	"76.1"	""	"75.5"	""	"85.6"	"0.6"	"100.1"	"116.5"	""	"601"	"9"	"34.000"	"27.000"	"3.95225062073767"	"17"	"0.005067"	"0.05728"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDPSTIEK"	"[R].dDPSTIEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"681.87866"	"1362.75005"	"1362.75168"	"-1.20"	"-0.00082"	"11/68"	"11"	"68"	"3345983.43188477"	"HCD"	"MS2"	"31.16179"	"242.7"	"100.000"	"42.7624"	"12395"	"12395"	"12376"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"356.7"	""	"259.7"	""	"268.4"	""	"433.6"	""	"508.0"	"485.0"	""	"934"	"32"	"36.000"	"29.000"	"0.0270593201231354"	""	"0.0006732"	"0.008634"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDPSTIEK"	"[R].dDPSTIEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"2"	"2"	"0.4839"	"0.0000"	"1"	"1"	"1"	"681.87915"	"1362.75102"	"1362.75168"	"-0.48"	"-0.00033"	"11/68"	"11"	"68"	"10688939.7481689"	"HCD"	"MS2"	"0"	"496.6"	"69.465"	"43.1837"	"12557"	"12557"	"12540"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"715.8"	""	"452.6"	""	"550.9"	""	"878.5"	""	"1086.1"	"1042.8"	""	"949"	"31"	"36.000"	"29.000"	"0.0361606490257058"	""	"0.000936"	"0.01312"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDPSTIEK"	"[R].dDPSTIEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"681.87921"	"1362.75115"	"1362.75168"	"-0.39"	"-0.00027"	"11/68"	"11"	"68"	"3420316.15637207"	"HCD"	"MS2"	"28.77272"	"240.5"	"100.000"	"42.8871"	"12435"	"12435"	"12416"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"368.9"	""	"242.0"	""	"258.0"	""	"448.8"	""	"500.8"	"469.7"	""	"948"	"32"	"36.000"	"29.000"	"0.027782948997965"	""	"0.0004639"	"0.007491"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDPSTIEK"	"[R].dDPSTIEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"681.87946"	"1362.75163"	"1362.75168"	"-0.03"	"-0.00002"	"11/68"	"11"	"68"	"10224653.116333"	"HCD"	"MS2"	"0"	"652.8"	"100.000"	"43.0569"	"12516"	"12516"	"12499"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"924.9"	""	"585.1"	""	"701.2"	""	"1150.8"	""	"1448.6"	"1397.0"	""	"948"	"30"	"36.000"	"29.000"	"0.0471822167824624"	""	"0.001374"	"0.01708"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQVEESAK"	"[R].nQVEESAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P0C219"	"Sarcolemmal membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Slmap PE=1 SV=1"	"P0C219"	"Sarcolemmal membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Slmap PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"681.88464"	"1362.76201"	"1362.76292"	"-0.66"	"-0.00045"	"7/74"	"7"	"74"	"621655.655029297"	"HCD"	"MS2"	"38.02387"	"54.7"	"100.000"	"28.3159"	"6520"	"6520"	"6491"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.5"	""	"50.6"	""	"43.6"	""	"110.6"	"0.4"	"132.8"	"122.6"	""	"971"	"28"	"36.000"	"29.000"	"0.0774799325983434"	"26"	"0.0003538"	"0.007333"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQVEESAK"	"[R].nQVEESAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P0C219"	"Sarcolemmal membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Slmap PE=1 SV=1"	"P0C219"	"Sarcolemmal membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Slmap PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"681.88507"	"1362.76286"	"1362.76292"	"-0.04"	"-0.00003"	"10/74"	"10"	"74"	"424345.512084961"	"HCD"	"MS2"	"100"	"37.4"	"100.000"	"28.2077"	"6490"	"6490"	"6466"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.0"	""	"36.5"	""	"37.9"	""	"60.1"	""	"108.7"	"76.6"	""	"978"	"12"	"36.000"	"29.000"	"2.8662156244736"	"19"	"0.001812"	"0.02083"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.3889"	"0.0000"	"1"	"1"	"1"	"454.93359"	"1362.78623"	"1362.78807"	"-1.35"	"-0.00061"	"6/66"	"6"	"66"	"2963499.04174805"	"HCD"	"MS2"	"38.78042"	"117.1"	"100.000"	"62.8669"	"20527"	"20527"	"20506"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"183.4"	""	"155.8"	""	"158.8"	""	"168.3"	""	"230.7"	"214.1"	""	"969"	"36"	"36.000"	"29.000"	"0.0120031098692333"	""	"0.001374"	"0.01587"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEELSGK"	"[R].lEEELSGk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4QQS8"	"Nuclear pore complex protein Nup85 OS=Rattus norvegicus OX=10116 GN=Nup85 PE=2 SV=1"	"Q4QQS8"	"Nuclear pore complex protein Nup85 OS=Rattus norvegicus OX=10116 GN=Nup85 PE=2 SV=1"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"681.89691"	"1362.78655"	"1362.78807"	"-1.12"	"-0.00076"	"11/64"	"11"	"64"	"424389.524902344"	"HCD"	"MS2"	"30.60602"	"34.3"	"100.000"	"67.1426"	"22279"	"22279"	"22252"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.8"	""	"39.6"	""	"42.1"	""	"52.9"	"1.4"	"67.4"	"67.5"	""	"969"	"26"	"36.000"	"29.000"	"0.127143388426976"	""	"0.001211"	"0.01563"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"681.89709"	"1362.78691"	"1362.78807"	"-0.85"	"-0.00058"	"7/66"	"7"	"66"	"697297.571105957"	"HCD"	"MS2"	"4.861114"	"60.3"	"100.000"	"63.5403"	"20816"	"20816"	"20795"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"94.9"	""	"71.4"	""	"78.8"	""	"91.0"	"1.4"	"115.2"	"118.7"	""	"968"	"39"	"36.000"	"29.000"	"0.00546821222701634"	""	"0"	"0.003473"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.3103"	"0.0000"	"1"	"1"	"1"	"454.93390"	"1362.78714"	"1362.78807"	"-0.68"	"-0.00031"	"6/66"	"6"	"66"	"4797430.3885498"	"HCD"	"MS2"	"32.39388"	"174.4"	"100.000"	"62.9873"	"20591"	"20591"	"20583"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"284.0"	"2.9"	"218.0"	""	"243.2"	""	"229.6"	""	"350.2"	"330.2"	""	"969"	"29"	"36.000"	"29.000"	"0.0635760851074804"	""	"0.001812"	"0.02026"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"681.89728"	"1362.78728"	"1362.78807"	"-0.58"	"-0.00039"	"12/66"	"12"	"66"	"658858.456176758"	"HCD"	"MS2"	"0"	"61.3"	"100.000"	"63.6526"	"20847"	"20847"	"20827"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"99.7"	""	"79.1"	""	"76.7"	""	"89.1"	""	"121.1"	"115.3"	""	"977"	"35"	"36.000"	"29.000"	"0.0164385901639927"	""	"0"	"0.003778"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.2059"	"0.0000"	"1"	"1"	"1"	"681.89734"	"1362.78740"	"1362.78807"	"-0.49"	"-0.00033"	"12/66"	"12"	"66"	"4364932.99615479"	"HCD"	"MS2"	"0"	"320.3"	"100.000"	"63.2408"	"20695"	"20695"	"20678"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"560.5"	""	"381.8"	""	"461.1"	""	"456.7"	""	"572.3"	"599.3"	""	"994"	"34"	"36.000"	"29.000"	"0.0214464981183399"	""	"0.000936"	"0.01147"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.2821"	"0.0000"	"1"	"1"	"1"	"681.89740"	"1362.78752"	"1362.78807"	"-0.40"	"-0.00027"	"7/66"	"7"	"66"	"2764585.19885254"	"HCD"	"MS2"	"0"	"202.6"	"100.000"	"62.7448"	"20477"	"20477"	"20458"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"378.4"	""	"287.5"	""	"278.8"	""	"292.3"	"0.1"	"328.9"	"348.8"	""	"994"	"39"	"36.000"	"29.000"	"0.00575912346009098"	""	"0.0003538"	"0.006419"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"454.93411"	"1362.78778"	"1362.78807"	"-0.21"	"-0.00009"	"8/66"	"8"	"66"	"1755840.90606689"	"HCD"	"MS2"	"33.07425"	"71.5"	"100.000"	"63.2746"	"20693"	"20693"	"20673"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"118.7"	""	"89.5"	""	"92.3"	""	"97.9"	""	"148.3"	"136.1"	""	"992"	"24"	"36.000"	"29.000"	"0.19031879376417"	""	"0.001211"	"0.01498"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.2619"	"0.0000"	"1"	"1"	"1"	"681.89764"	"1362.78801"	"1362.78807"	"-0.04"	"-0.00003"	"7/66"	"7"	"66"	"3022212.76593018"	"HCD"	"MS2"	"3.81317"	"231.0"	"100.000"	"62.6441"	"20452"	"20452"	"20433"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"441.5"	""	"329.9"	""	"315.9"	""	"332.9"	""	"385.1"	"379.2"	""	"993"	"42"	"36.000"	"29.000"	"0.003220469962567"	""	"0.0001301"	"0.004319"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.2059"	"0.0000"	"1"	"1"	"1"	"681.89764"	"1362.78801"	"1362.78807"	"-0.04"	"-0.00003"	"12/66"	"12"	"66"	"4791041.65789795"	"HCD"	"MS2"	"0"	"353.4"	"100.000"	"63.3298"	"20716"	"20716"	"20702"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"646.2"	""	"420.8"	""	"493.6"	""	"512.7"	""	"621.8"	"650.7"	""	"993"	"34"	"36.000"	"29.000"	"0.0213264835888766"	""	"0.0005778"	"0.008091"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.1875"	"0.0000"	"1"	"1"	"1"	"681.89764"	"1362.78801"	"1362.78807"	"-0.04"	"-0.00003"	"12/66"	"12"	"66"	"18609213.8331299"	"HCD"	"MS2"	"0"	"781.6"	"61.425"	"62.9275"	"20568"	"20568"	"20551"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1457.7"	""	"1017.7"	""	"1078.3"	""	"1119.9"	""	"1361.4"	"1363.7"	""	"993"	"32"	"36.000"	"29.000"	"0.0293034836305321"	""	"0.001036"	"0.01343"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.1875"	"0.0000"	"1"	"1"	"1"	"681.89777"	"1362.78826"	"1362.78807"	"0.14"	"0.00009"	"12/66"	"12"	"66"	"18862724.3540039"	"HCD"	"MS2"	"0"	"782.8"	"59.007"	"63.0420"	"20599"	"20599"	"20583"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1444.9"	""	"997.9"	""	"1091.7"	""	"1103.1"	""	"1369.9"	"1400.6"	""	"999"	"32"	"36.000"	"29.000"	"0.0297533240692741"	""	"0.000936"	"0.01296"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.0968"	"0.0000"	"1"	"1"	"1"	"681.89813"	"1362.78899"	"1362.78807"	"0.68"	"0.00046"	"7/66"	"7"	"66"	"1232943.04364014"	"HCD"	"MS2"	"0"	"104.5"	"100.000"	"62.5797"	"20426"	"20426"	"20404"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"184.5"	""	"163.9"	""	"141.3"	""	"143.6"	"2.6"	"178.5"	"173.6"	""	"940"	"31"	"36.000"	"29.000"	"0.0399114823267067"	""	"0.0003538"	"0.006488"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSMSAYEMR"	"[K].sGSMSAYEmR.[M]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"682.31128"	"1363.61528"	"1363.61835"	"-2.25"	"-0.00154"	"6/86"	"6"	"86"	"391827.519226074"	"HCD"	"MS2"	"43.7042"	"28.6"	"100.000"	"32.7403"	"8327"	"8327"	"8302"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.5"	""	"39.0"	""	"40.5"	""	"38.4"	""	"52.6"	"52.2"	""	"185"	"18"	"29.000"	"22.000"	"0.138083482886057"	"14"	"0.001211"	"0.01418"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSMSAYEMR"	"[K].sGSMSAYEmR.[M]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"682.31244"	"1363.61760"	"1363.61835"	"-0.55"	"-0.00038"	"7/86"	"7"	"86"	"379756.170166016"	"HCD"	"MS2"	"0"	"29.2"	"100.000"	"32.7591"	"8328"	"8328"	"8305"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.0"	""	"37.6"	""	"44.0"	""	"38.1"	""	"50.9"	"57.0"	""	"189"	"14"	"29.000"	"22.000"	"0.360937335943844"	"13"	"0.001374"	"0.01723"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLTQDEMQR"	"[K].nLTQDEMQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"682.34601"	"1363.68474"	"1363.68373"	"0.74"	"0.00051"	"6/86"	"6"	"86"	"618005.371887207"	"HCD"	"MS2"	"0"	"48.3"	"100.000"	"36.2740"	"9751"	"9751"	"9736"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"69.8"	""	"57.7"	""	"54.1"	""	"79.9"	""	"98.8"	"102.0"	""	"683"	"14"	"35.000"	"28.000"	"1.36581132043415"	"15"	"0.003449"	"0.03316"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMAEEVAITR"	"[R].dMAEEVAITR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"682.35748"	"1363.70769"	"1363.70888"	"-0.87"	"-0.00060"	"7/88"	"7"	"88"	"1094042.90368652"	"HCD"	"MS2"	"3.167808"	"71.2"	"100.000"	"59.6954"	"19275"	"19275"	"19254"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"95.9"	""	"93.1"	""	"93.0"	""	"91.3"	""	"143.3"	"160.0"	""	"775"	"51"	"35.000"	"28.000"	"0.000322308461302285"	"22"	"0"	"5.009E-05"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMAEEVAITR"	"[R].dMAEEVAITR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.8036"	"0.0000"	"1"	"1"	"1"	"682.35767"	"1363.70806"	"1363.70888"	"-0.61"	"-0.00041"	"7/88"	"7"	"88"	"1044863.31280518"	"HCD"	"MS2"	"6.772877"	"69.0"	"100.000"	"59.4632"	"19195"	"19195"	"19174"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"96.0"	""	"92.5"	""	"97.0"	""	"75.7"	""	"149.1"	"150.2"	""	"775"	"56"	"35.000"	"28.000"	"0.000100293250462182"	"27"	"0"	"3.264E-05"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMAEEVAITR"	"[R].dMAEEVAITR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"682.35840"	"1363.70952"	"1363.70888"	"0.47"	"0.00032"	"8/88"	"8"	"88"	"1504512.2232666"	"HCD"	"MS2"	"0"	"86.4"	"100.000"	"59.1642"	"19073"	"19073"	"19053"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"116.6"	""	"105.2"	""	"113.4"	""	"101.1"	"0.3"	"192.8"	"191.5"	""	"790"	"49"	"35.000"	"28.000"	"0.00053777064957405"	"24"	"0"	"6.598E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMAEEVAITR"	"[R].dMAEEVAITR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.7925"	"0.0000"	"1"	"1"	"1"	"682.35858"	"1363.70989"	"1363.70888"	"0.74"	"0.00050"	"8/88"	"8"	"88"	"1290568.60900879"	"HCD"	"MS2"	"5.455171"	"77.0"	"100.000"	"59.3846"	"19148"	"19148"	"19126"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"111.6"	""	"94.6"	""	"96.5"	""	"99.3"	""	"178.2"	"151.8"	""	"794"	"53"	"35.000"	"28.000"	"0.000193548810571045"	"26"	"0"	"2.479E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNQQEFVR"	"[K].dVNQQEFVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"682.36176"	"1363.71623"	"1363.71674"	"-0.37"	"-0.00025"	"7/86"	"7"	"86"	"1879250.84692383"	"HCD"	"MS2"	"5.546416"	"102.6"	"100.000"	"45.2453"	"13389"	"13389"	"13371"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"183.6"	""	"122.4"	""	"140.1"	""	"185.2"	""	"196.7"	"147.7"	""	"785"	"44"	"35.000"	"28.000"	"0.00158066435972743"	"24"	"0"	"0.000772"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNQQEFVR"	"[K].dVNQQEFVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"682.36182"	"1363.71636"	"1363.71674"	"-0.28"	"-0.00019"	"7/86"	"7"	"86"	"1123585.91741943"	"HCD"	"MS2"	"0"	"65.3"	"100.000"	"45.3325"	"13436"	"13436"	"13415"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"114.4"	""	"75.7"	""	"75.8"	""	"116.7"	"0.0"	"129.5"	"106.7"	""	"788"	"41"	"35.000"	"28.000"	"0.00331509685808207"	"22"	"0"	"0.0003842"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNQQEFVR"	"[K].dVNQQEFVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"682.36194"	"1363.71660"	"1363.71674"	"-0.11"	"-0.00007"	"7/86"	"7"	"86"	"595148.216003418"	"HCD"	"MS2"	"9.80123"	"39.3"	"100.000"	"45.5399"	"13509"	"13509"	"13491"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.5"	""	"55.3"	""	"41.7"	""	"63.2"	""	"79.8"	"72.1"	""	"784"	"38"	"35.000"	"28.000"	"0.0057847696104415"	"20"	"0"	"0.0007651"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNQQEFVR"	"[K].dVNQQEFVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"682.36316"	"1363.71904"	"1363.71674"	"1.68"	"0.00115"	"7/86"	"7"	"86"	"810331.036010742"	"HCD"	"MS2"	"21.03341"	"52.3"	"100.000"	"45.0403"	"13317"	"13317"	"13289"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.2"	""	"60.4"	""	"68.4"	""	"98.1"	""	"108.2"	"72.5"	""	"808"	"25"	"36.000"	"29.000"	"0.127756017470803"	"20"	"0"	"0.001309"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLGGLEMELR"	"[R].tLGGLEmELR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"682.37616"	"1363.74504"	"1363.74527"	"-0.16"	"-0.00011"	"15/86"	"15"	"86"	"344115.24407959"	"HCD"	"MS2"	"16.89739"	"17.5"	"100.000"	"79.1195"	"27125"	"27125"	"27105"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.9"	""	"16.8"	""	"19.3"	""	"49.8"	""	"28.4"	"30.5"	""	"876"	"37"	"36.000"	"29.000"	"0.00956035701387235"	"16"	"0"	"0.003104"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLGGLEMELR"	"[R].tLGGLEmELR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"682.37744"	"1363.74761"	"1363.74527"	"1.71"	"0.00117"	"7/86"	"7"	"86"	"281399.728759766"	"HCD"	"MS2"	"9.339885"	"13.4"	"100.000"	"79.5363"	"27293"	"27293"	"27272"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.7"	""	"13.2"	""	"15.8"	""	"36.3"	""	"23.2"	"24.2"	""	"854"	"27"	"36.000"	"29.000"	"0.092774340337482"	"19"	"0.008437"	"0.1015"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTEDEVEK"	"[K].gTEDEVEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P58775"	"Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1"	"P58775"	"Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"682.86810"	"1364.72893"	"1364.73095"	"-1.48"	"-0.00101"	"7/66"	"7"	"66"	"596069.146484375"	"HCD"	"MS2"	"0"	"59.4"	"100.000"	"33.6615"	"8700"	"8700"	"8680"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.3"	""	"40.4"	""	"56.0"	""	"109.6"	""	"143.6"	"147.4"	""	"888"	"45"	"36.000"	"29.000"	"0.00136893544991071"	""	"0.0001301"	"0.00501"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTEDEVEK"	"[K].gTEDEVEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P58775"	"Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1"	"P58775"	"Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"682.86877"	"1364.73027"	"1364.73095"	"-0.49"	"-0.00034"	"7/66"	"7"	"66"	"707911.412780762"	"HCD"	"MS2"	"0"	"69.9"	"100.000"	"33.6363"	"8683"	"8683"	"8667"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.7"	""	"49.5"	""	"68.5"	""	"132.8"	""	"165.5"	"171.9"	""	"891"	"40"	"36.000"	"29.000"	"0.00466495768156676"	""	"0.0003538"	"0.007246"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDIQNSDK"	"[R].sDIQNSDk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVT0"	"Adhesion G protein-coupled receptor F5 OS=Rattus norvegicus OX=10116 GN=Adgrf5 PE=1 SV=1"	"Q9WVT0"	"Adhesion G protein-coupled receptor F5 OS=Rattus norvegicus OX=10116 GN=Adgrf5 PE=1 SV=1"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"682.87433"	"1364.74138"	"1364.74218"	"-0.59"	"-0.00040"	"10/76"	"10"	"76"	"276315.092712402"	"HCD"	"MS2"	"0"	"25.6"	"100.000"	"29.3601"	"6958"	"6958"	"6940"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.0"	""	"20.5"	""	"19.7"	""	"55.8"	""	"60.8"	"57.2"	""	"925"	"27"	"36.000"	"29.000"	"0.0845496349966018"	"27"	"0.005001"	"0.0566"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"455.58725"	"1364.74720"	"1364.74957"	"-1.74"	"-0.00079"	"6/68"	"6"	"68"	"5182549.73345947"	"HCD"	"MS2"	"0"	"200.6"	"100.000"	"61.7769"	"20104"	"20104"	"20092"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"296.1"	""	"208.8"	""	"255.1"	""	"238.9"	""	"451.6"	"458.8"	""	"959"	"32"	"36.000"	"29.000"	"0.0297021995499317"	"24"	"0.002973"	"0.02874"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"682.87732"	"1364.74736"	"1364.74957"	"-1.62"	"-0.00111"	"7/68"	"7"	"68"	"268622.57421875"	"HCD"	"MS2"	"0"	"28.9"	"100.000"	"62.4071"	"20356"	"20356"	"20329"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.2"	""	"37.9"	""	"37.5"	""	"40.8"	"0.4"	"59.0"	"55.6"	""	"957"	"30"	"36.000"	"29.000"	"0.0443488070487019"	"28"	"0.0006732"	"0.008963"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"682.87732"	"1364.74736"	"1364.74957"	"-1.62"	"-0.00111"	"7/68"	"7"	"68"	"25343726.7150879"	"HCD"	"MS2"	"0"	"739.0"	"39.977"	"61.7198"	"20082"	"20082"	"20065"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1107.1"	""	"728.0"	""	"971.0"	""	"844.3"	"0.5"	"1752.6"	"1622.7"	""	"957"	"41"	"36.000"	"29.000"	"0.00422553732350283"	"26"	"0.001211"	"0.01408"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.6944"	"0.0000"	"1"	"1"	"1"	"455.58740"	"1364.74765"	"1364.74957"	"-1.41"	"-0.00064"	"6/68"	"6"	"68"	"4899889.1262207"	"HCD"	"MS2"	"0"	"192.9"	"100.000"	"61.9053"	"20142"	"20142"	"20126"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"269.8"	""	"191.4"	""	"250.8"	""	"228.3"	""	"448.9"	"445.5"	""	"954"	"36"	"36.000"	"29.000"	"0.0119541411369632"	"25"	"0.002379"	"0.02477"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"682.87750"	"1364.74773"	"1364.74957"	"-1.35"	"-0.00092"	"7/68"	"7"	"68"	"2189305.39404297"	"HCD"	"MS2"	"0"	"181.3"	"100.000"	"62.0015"	"20194"	"20194"	"20182"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"268.9"	""	"189.0"	""	"233.5"	""	"202.2"	""	"414.4"	"421.3"	""	"954"	"40"	"36.000"	"29.000"	"0.00446188506568383"	"26"	"0.0001301"	"0.004416"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"455.58755"	"1364.74811"	"1364.74957"	"-1.07"	"-0.00049"	"5/68"	"5"	"68"	"1896674.61737061"	"HCD"	"MS2"	"7.455267"	"79.0"	"100.000"	"61.6226"	"20026"	"20026"	"20001"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"120.3"	""	"82.0"	""	"105.8"	""	"100.6"	""	"170.1"	"172.6"	""	"953"	"32"	"36.000"	"29.000"	"0.0287781521897845"	"24"	"0.0008629"	"0.01037"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"682.87787"	"1364.74846"	"1364.74957"	"-0.82"	"-0.00056"	"7/68"	"7"	"68"	"3065608.06274414"	"HCD"	"MS2"	"0"	"241.7"	"100.000"	"61.5697"	"20004"	"20004"	"19985"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"395.9"	""	"263.6"	""	"307.6"	""	"281.4"	""	"551.1"	"496.1"	""	"958"	"39"	"36.000"	"29.000"	"0.00608604996394892"	"24"	"0.0001301"	"0.004603"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"682.87793"	"1364.74858"	"1364.74957"	"-0.73"	"-0.00050"	"7/68"	"7"	"68"	"1569876.75384521"	"HCD"	"MS2"	"0"	"133.6"	"100.000"	"62.1571"	"20240"	"20240"	"20233"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"196.4"	""	"128.0"	""	"175.2"	""	"151.0"	""	"311.5"	"310.9"	""	"958"	"43"	"36.000"	"29.000"	"0.00215444550493885"	"26"	"0"	"0.003071"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"682.87793"	"1364.74858"	"1364.74957"	"-0.73"	"-0.00050"	"7/68"	"7"	"68"	"20599609.6741943"	"HCD"	"MS2"	"0"	"829.1"	"55.054"	"61.8686"	"20127"	"20127"	"20113"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1240.6"	""	"816.3"	""	"1085.0"	""	"964.3"	""	"1911.3"	"1871.1"	""	"958"	"40"	"36.000"	"29.000"	"0.00429868392565859"	"26"	"0.0004639"	"0.007797"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.7105"	"0.0000"	"1"	"1"	"1"	"455.58774"	"1364.74866"	"1364.74957"	"-0.67"	"-0.00030"	"6/68"	"6"	"68"	"2455477.00360107"	"HCD"	"MS2"	"3.145701"	"100.4"	"100.000"	"61.5059"	"19994"	"19994"	"19969"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"150.7"	""	"108.1"	""	"132.6"	""	"130.4"	""	"215.0"	"219.6"	""	"958"	"38"	"36.000"	"29.000"	"0.00802297637616664"	"26"	"0.002379"	"0.02454"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"682.87811"	"1364.74895"	"1364.74957"	"-0.46"	"-0.00031"	"6/68"	"6"	"68"	"281019.392883301"	"HCD"	"MS2"	"0"	"26.5"	"100.000"	"62.4963"	"20376"	"20376"	"20351"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.7"	""	"35.2"	""	"35.5"	""	"34.1"	""	"53.0"	"55.0"	""	"963"	"39"	"36.000"	"29.000"	"0.00637670449196231"	"22"	"0"	"0.002316"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"682.87860"	"1364.74993"	"1364.74957"	"0.26"	"0.00018"	"7/68"	"7"	"68"	"2193311.7286377"	"HCD"	"MS2"	"3.235548"	"176.7"	"100.000"	"61.4116"	"19955"	"19955"	"19937"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"289.1"	""	"186.0"	""	"228.3"	""	"232.9"	""	"398.4"	"343.7"	""	"977"	"44"	"36.000"	"29.000"	"0.00215211050822951"	"26"	"0"	"0.003276"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTENAFSPSR"	"[K].qTENAFSPSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"683.35107"	"1365.69487"	"1365.69601"	"-0.83"	"-0.00057"	"8/104"	"8"	"104"	"1455769.16668701"	"HCD"	"MS2"	"0"	"79.0"	"100.000"	"33.0462"	"8444"	"8444"	"8425"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"94.6"	""	"64.3"	""	"82.4"	""	"162.3"	""	"172.4"	"175.5"	""	"698"	"34"	"35.000"	"28.000"	"0.013484207499187"	""	"0"	"0.0007286"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTENAFSPSR"	"[K].qTENAFSPSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"0"	"2"	"2"	"0.4138"	"0.0000"	"1"	"1"	"1"	"683.35114"	"1365.69499"	"1365.69601"	"-0.74"	"-0.00051"	"7/104"	"7"	"104"	"574810.686828613"	"HCD"	"MS2"	"0"	"43.8"	"100.000"	"33.3425"	"8565"	"8565"	"8544"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.3"	""	"49.0"	""	"50.7"	""	"94.0"	""	"96.6"	"80.9"	""	"697"	"29"	"35.000"	"28.000"	"0.0427762572058705"	""	"0.0001301"	"0.003986"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTENAFSPSR"	"[K].qTENAFSPSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"0"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"683.35132"	"1365.69536"	"1365.69601"	"-0.47"	"-0.00032"	"6/104"	"6"	"104"	"1371055.57452393"	"HCD"	"MS2"	"6.81211"	"80.1"	"100.000"	"33.0162"	"8439"	"8439"	"8411"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.6"	""	"74.8"	""	"81.3"	""	"172.0"	"0.6"	"171.6"	"173.5"	""	"692"	"37"	"35.000"	"28.000"	"0.00677760257033073"	""	"0"	"0.001279"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTENAFSPSR"	"[K].qTENAFSPSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"683.35144"	"1365.69560"	"1365.69601"	"-0.30"	"-0.00020"	"7/104"	"7"	"104"	"573186.649169922"	"HCD"	"MS2"	"26.78852"	"42.6"	"100.000"	"33.3400"	"8571"	"8571"	"8550"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.5"	""	"56.5"	""	"40.8"	""	"78.4"	""	"85.2"	"86.2"	""	"697"	"26"	"35.000"	"28.000"	"0.0873379074681691"	"26"	"0.0001301"	"0.004743"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDAQTGADR"	"[K].rFDAQTGADR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"1"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"683.35596"	"1365.70464"	"1365.70724"	"-1.91"	"-0.00130"	"11/102"	"11"	"102"	"487961.916137695"	"HCD"	"MS2"	"0"	"19.3"	"100.000"	"23.8541"	"4737"	"4737"	"4715"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.0"	""	"23.0"	""	"25.6"	""	"31.9"	""	"34.0"	"33.6"	""	"753"	"31"	"35.000"	"28.000"	"0.0296322739820205"	"25"	"0.006308"	"0.07134"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPASDQMK"	"[R].dPASDQmk.[Q]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"683.35687"	"1365.70647"	"1365.70844"	"-1.44"	"-0.00098"	"6/68"	"6"	"68"	"852740.31854248"	"HCD"	"MS2"	"0"	"53.0"	"100.000"	"27.1479"	"6045"	"6045"	"6021"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.9"	""	"41.7"	""	"55.1"	""	"122.5"	"2.3"	"116.3"	"89.5"	""	"757"	"21"	"35.000"	"28.000"	"0.289111844084156"	"25"	"0.007935"	"0.09722"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQELFDEIR"	"[K].sQELFDEIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P06536"	"Glucocorticoid receptor OS=Rattus norvegicus OX=10116 GN=Nr3c1 PE=1 SV=2"	"P06536"	"Glucocorticoid receptor OS=Rattus norvegicus OX=10116 GN=Nr3c1 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"683.36414"	"1365.72099"	"1365.72116"	"-0.12"	"-0.00008"	"6/90"	"6"	"90"	"356158.265197754"	"HCD"	"MS2"	"11.58002"	"22.5"	"100.000"	"76.1889"	"25949"	"25949"	"25935"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.8"	""	"29.2"	""	"28.1"	""	"36.1"	""	"42.4"	"39.5"	""	"857"	"45"	"36.000"	"29.000"	"0.00137705354080737"	"25"	"0"	"0.001248"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQELFDEIR"	"[K].sQELFDEIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P06536"	"Glucocorticoid receptor OS=Rattus norvegicus OX=10116 GN=Nr3c1 PE=1 SV=2"	"P06536"	"Glucocorticoid receptor OS=Rattus norvegicus OX=10116 GN=Nr3c1 PE=1 SV=2"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"683.36444"	"1365.72161"	"1365.72116"	"0.33"	"0.00022"	"6/90"	"6"	"90"	"335572.213134766"	"HCD"	"MS2"	"21.01303"	"21.0"	"100.000"	"76.2519"	"25966"	"25966"	"25949"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.7"	""	"24.9"	""	"24.4"	""	"38.9"	""	"43.0"	"37.8"	""	"872"	"42"	"36.000"	"29.000"	"0.00290059096103959"	""	"0"	"0.000963"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAQTLQQYR"	"[R].eAQTLQQYR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q62771"	"Signal transducer and activator of transcription 5A OS=Rattus norvegicus OX=10116 GN=Stat5a PE=1 SV=1"	"Q62771; P52632"	"Signal transducer and activator of transcription 5A OS=Rattus norvegicus OX=10116 GN=Stat5a PE=1 SV=1; Signal transducer and activator of transcription 5B OS=Rattus norvegicus OX=10116 GN=Stat5b PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"683.36841"	"1365.72954"	"1365.73239"	"-2.09"	"-0.00143"	"14/82"	"14"	"82"	"738091.614624023"	"HCD"	"MS2"	"12.61368"	"51.5"	"100.000"	"38.7880"	"10776"	"10776"	"10752"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.6"	""	"53.3"	""	"61.8"	""	"107.4"	""	"107.2"	"93.9"	""	"860"	"10"	"36.000"	"29.000"	"4.19245544218477"	"14"	"0.00413"	"0.04572"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAQTLQQYR"	"[R].eAQTLQQYR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q62771"	"Signal transducer and activator of transcription 5A OS=Rattus norvegicus OX=10116 GN=Stat5a PE=1 SV=1"	"Q62771; P52632"	"Signal transducer and activator of transcription 5A OS=Rattus norvegicus OX=10116 GN=Stat5a PE=1 SV=1; Signal transducer and activator of transcription 5B OS=Rattus norvegicus OX=10116 GN=Stat5b PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"683.36975"	"1365.73223"	"1365.73239"	"-0.12"	"-0.00008"	"8/82"	"8"	"82"	"961928.876403809"	"HCD"	"MS2"	"27.20399"	"66.7"	"100.000"	"38.9545"	"10835"	"10835"	"10805"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.3"	""	"68.3"	""	"68.3"	""	"147.9"	"0.3"	"144.5"	"117.4"	""	"900"	"23"	"36.000"	"29.000"	"0.211452348872347"	"21"	"0"	"0.002419"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGDGTITTK"	"[K].dGDGTITTk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"683.38281"	"1365.75835"	"1365.76258"	"-3.10"	"-0.00212"	"8/78"	"8"	"78"	"1363080.48907471"	"HCD"	"MS2"	"0"	"106.5"	"100.000"	"37.0390"	"10063"	"10063"	"10034"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.2"	""	"88.0"	""	"99.2"	""	"314.5"	""	"227.9"	"207.1"	""	"940"	"45"	"36.000"	"29.000"	"0.00158160437606481"	"24"	"0"	"0.0006387"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGDGTITTK"	"[K].dGDGTITTk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"683.38446"	"1365.76164"	"1365.76258"	"-0.69"	"-0.00047"	"8/78"	"8"	"78"	"1074834.52728271"	"HCD"	"MS2"	"39.54926"	"90.0"	"100.000"	"36.8265"	"9982"	"9982"	"9953"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.7"	""	"77.2"	""	"83.2"	""	"272.4"	""	"186.3"	"170.9"	""	"910"	"46"	"36.000"	"29.000"	"0.00117492838673874"	"24"	"0"	"0.000448"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGDGTITTK"	"[K].dGDGTITTk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"683.38574"	"1365.76421"	"1365.76258"	"1.19"	"0.00081"	"7/78"	"7"	"78"	"1512045.33007813"	"HCD"	"MS2"	"0"	"127.6"	"100.000"	"37.3539"	"10191"	"10191"	"10169"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"163.0"	""	"113.9"	""	"168.1"	""	"268.8"	""	"277.8"	"222.4"	""	"893"	"25"	"36.000"	"29.000"	"0.145821467064948"	"23"	"0"	"0.002424"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGDGTITTK"	"[K].dGDGTITTk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"683.38672"	"1365.76616"	"1365.76258"	"2.62"	"0.00179"	"7/78"	"7"	"78"	"1703893.24798584"	"HCD"	"MS2"	"0"	"141.0"	"100.000"	"37.1462"	"10112"	"10112"	"10090"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"166.1"	""	"137.8"	""	"173.7"	""	"298.1"	"1.4"	"302.1"	"259.3"	""	"903"	"29"	"36.000"	"29.000"	"0.0534143262409912"	"22"	"0"	"0.002864"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTEEALALPR"	"[R].hTEEALALPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P80299"	"Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ephx2 PE=1 SV=1"	"P80299"	"Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ephx2 PE=1 SV=1"	"0"	"3"	"3"	"0.6842"	"0.0000"	"1"	"1"	"1"	"455.92697"	"1365.76636"	"1365.76878"	"-1.77"	"-0.00081"	"10/76"	"10"	"76"	"1439229.51507568"	"HCD"	"MS2"	"0"	"34.5"	"100.000"	"41.3534"	"11810"	"11810"	"11789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.1"	""	"45.8"	""	"43.0"	""	"54.8"	""	"64.9"	"67.0"	""	"903"	"38"	"36.000"	"29.000"	"0.00727206504282989"	"27"	"0"	"0.0002946"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTEEALALPR"	"[R].hTEEALALPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P80299"	"Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ephx2 PE=1 SV=1"	"P80299"	"Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ephx2 PE=1 SV=1"	"0"	"3"	"3"	"0.7400"	"0.0000"	"1"	"1"	"1"	"455.92722"	"1365.76709"	"1365.76878"	"-1.23"	"-0.00056"	"13/76"	"13"	"76"	"1930791.68914795"	"HCD"	"MS2"	"4.009039"	"39.9"	"100.000"	"41.3482"	"11817"	"11817"	"11797"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.4"	""	"49.3"	""	"43.1"	""	"65.0"	"0.1"	"76.0"	"89.6"	""	"930"	"50"	"36.000"	"29.000"	"0.000429984650881273"	"29"	"0"	"0.0001283"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNNQVGLAPAVP"	"[R].gNNQVGLAPAVP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P16228"	"Cathepsin E OS=Rattus norvegicus OX=10116 GN=Ctse PE=1 SV=3"	"P16228"	"Cathepsin E OS=Rattus norvegicus OX=10116 GN=Ctse PE=1 SV=3"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"683.38727"	"1365.76726"	"1365.76878"	"-1.11"	"-0.00076"	"6/94"	"6"	"94"	"397797.882751465"	"HCD"	"MS2"	"32.23571"	"11.0"	"100.000"	"76.9178"	"26245"	"26245"	"26223"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.5"	""	"17.0"	""	"17.2"	""	"15.5"	""	"22.2"	"20.5"	""	"930"	"24"	"36.000"	"29.000"	"0.167669069005064"	"21"	"0"	"0.003045"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTEEALALPR"	"[R].hTEEALALPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P80299"	"Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ephx2 PE=1 SV=1"	"P80299"	"Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ephx2 PE=1 SV=1"	"0"	"3"	"3"	"0.5882"	"0.0000"	"1"	"1"	"1"	"455.92749"	"1365.76792"	"1365.76878"	"-0.63"	"-0.00029"	"5/76"	"5"	"76"	"1161187.33660889"	"HCD"	"MS2"	"8.870949"	"40.8"	"100.000"	"41.6519"	"11931"	"11931"	"11910"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.0"	""	"50.8"	""	"49.6"	""	"71.2"	"0.5"	"70.4"	"93.1"	""	"927"	"34"	"36.000"	"29.000"	"0.017621778519458"	"28"	"0"	"0.0007388"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNNQVGLAPAVP"	"[R].gNNQVGLAPAVP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P16228"	"Cathepsin E OS=Rattus norvegicus OX=10116 GN=Ctse PE=1 SV=3"	"P16228"	"Cathepsin E OS=Rattus norvegicus OX=10116 GN=Ctse PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"683.38824"	"1365.76921"	"1365.76878"	"0.32"	"0.00022"	"6/94"	"6"	"94"	"349768.683288574"	"HCD"	"MS2"	"41.24659"	"9.4"	"100.000"	"76.9747"	"26259"	"26259"	"26235"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.8"	""	"15.5"	""	"14.6"	""	"13.0"	""	"19.4"	"14.6"	""	"937"	"24"	"36.000"	"29.000"	"0.173264502227055"	"24"	"0.0001301"	"0.003896"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQDTPGVK"	"[R].yQDTPGVk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"683.39178"	"1365.77629"	"1365.77784"	"-1.13"	"-0.00077"	"12/70"	"12"	"70"	"2174794.15515137"	"HCD"	"MS2"	"31.07665"	"151.6"	"100.000"	"43.3669"	"12642"	"12642"	"12623"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"241.3"	""	"189.3"	""	"218.3"	""	"222.9"	""	"258.1"	"309.5"	""	"850"	"34"	"36.000"	"29.000"	"0.0158631317063181"	"24"	"0.0003538"	"0.007047"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQDTPGVK"	"[R].yQDTPGVk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"683.39270"	"1365.77812"	"1365.77784"	"0.21"	"0.00014"	"7/70"	"7"	"70"	"1904599.0848999"	"HCD"	"MS2"	"11.06723"	"136.3"	"100.000"	"43.5442"	"12704"	"12704"	"12682"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"190.5"	""	"182.1"	""	"194.3"	""	"220.9"	""	"235.0"	"278.5"	""	"883"	"26"	"36.000"	"29.000"	"0.110390247718897"	"15"	"0.007339"	"0.08378"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQGEEVDFAR"	"[R].sQGEEVDFAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"683.84320"	"1366.67912"	"1366.68002"	"-0.66"	"-0.00045"	"8/100"	"8"	"100"	"583773.425170898"	"HCD"	"MS2"	"0"	"37.5"	"100.000"	"42.3966"	"12246"	"12246"	"12220"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.4"	""	"44.3"	""	"45.9"	""	"59.8"	""	"84.0"	"72.1"	""	"606"	"32"	"34.000"	"27.000"	"0.019881201568978"	"14"	"0"	"0.000423"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGEGEVSGLMR"	"[R].sGEGEVSGLmR.[K]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"683.84473"	"1366.68218"	"1366.68340"	"-0.89"	"-0.00061"	"8/92"	"8"	"92"	"388873.168395996"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"34.1941"	"8913"	"8913"	"8887"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.3"	""	"31.8"	""	"31.2"	""	"56.9"	"0.7"	"50.2"	"49.7"	""	"624"	"38"	"34.000"	"27.000"	"0.00531073454619225"	"17"	"0"	"0.0005423"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGEGEVSGLMR"	"[R].sGEGEVSGLmR.[K]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"683.84509"	"1366.68291"	"1366.68340"	"-0.36"	"-0.00024"	"7/92"	"7"	"92"	"372473.768310547"	"HCD"	"MS2"	"32.04935"	"26.8"	"100.000"	"34.2190"	"8917"	"8917"	"8889"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.4"	""	"29.1"	""	"31.4"	""	"52.6"	""	"52.3"	"53.1"	""	"645"	"34"	"35.000"	"28.000"	"0.0142734750086947"	"17"	"0.000936"	"0.01219"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADEFVEK"	"[K].aADEFVEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"3"	"3"	"0.4783"	"0.0000"	"1"	"1"	"1"	"456.25833"	"1366.76044"	"1366.76185"	"-1.03"	"-0.00047"	"5/64"	"5"	"64"	"1806992.90454102"	"HCD"	"MS2"	"15.90283"	"78.0"	"100.000"	"58.0749"	"18628"	"18628"	"18607"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"114.9"	""	"93.5"	""	"142.9"	""	"121.1"	""	"114.9"	"150.6"	""	"919"	"23"	"36.000"	"29.000"	"0.230295533851732"	"26"	"0.006685"	"0.07539"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADEFVEK"	"[K].aADEFVEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"3"	"3"	"0.5200"	"0.0000"	"1"	"1"	"1"	"456.25839"	"1366.76062"	"1366.76185"	"-0.90"	"-0.00041"	"5/64"	"5"	"64"	"1828666.31402588"	"HCD"	"MS2"	"5.828194"	"77.9"	"100.000"	"58.2795"	"18697"	"18697"	"18671"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"119.0"	""	"101.9"	""	"139.0"	""	"115.3"	""	"106.3"	"156.5"	""	"919"	"25"	"36.000"	"29.000"	"0.152857064738595"	"26"	"0.004942"	"0.0528"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADEFVEK"	"[K].aADEFVEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.5814"	"0.0000"	"1"	"1"	"1"	"683.88409"	"1366.76091"	"1366.76185"	"-0.69"	"-0.00047"	"14/64"	"14"	"64"	"2159382.51855469"	"HCD"	"MS2"	"24.745"	"178.9"	"100.000"	"58.1849"	"18658"	"18658"	"18639"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"332.3"	""	"244.5"	""	"249.0"	""	"290.0"	"0.1"	"278.3"	"296.0"	""	"911"	"43"	"36.000"	"29.000"	"0.00234146883295795"	""	"0"	"0.003094"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADEFVEK"	"[K].aADEFVEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"683.88416"	"1366.76103"	"1366.76185"	"-0.60"	"-0.00041"	"14/64"	"14"	"64"	"6702458.465271"	"HCD"	"MS2"	"0"	"531.8"	"100.000"	"58.4958"	"18785"	"18785"	"18767"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"880.1"	""	"686.4"	""	"749.9"	""	"836.6"	""	"894.3"	"993.8"	""	"914"	"42"	"36.000"	"29.000"	"0.00319092208663267"	""	"0.0003538"	"0.006803"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADEFVEK"	"[K].aADEFVEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.3171"	"0.0000"	"1"	"1"	"1"	"683.88422"	"1366.76116"	"1366.76185"	"-0.51"	"-0.00035"	"14/64"	"14"	"64"	"6996712.69476318"	"HCD"	"MS2"	"0"	"538.3"	"100.000"	"58.3028"	"18721"	"18721"	"18703"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"898.0"	""	"640.0"	""	"772.6"	""	"841.1"	""	"912.8"	"1032.5"	""	"911"	"41"	"36.000"	"29.000"	"0.0032470455522263"	""	"0.0003538"	"0.006569"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADEFVEK"	"[K].aADEFVEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.5349"	"0.0000"	"1"	"1"	"1"	"683.88428"	"1366.76128"	"1366.76185"	"-0.42"	"-0.00029"	"14/64"	"14"	"64"	"2209739.65460205"	"HCD"	"MS2"	"20.63031"	"183.1"	"100.000"	"57.9945"	"18595"	"18595"	"18575"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"326.4"	""	"255.4"	""	"258.4"	""	"300.0"	""	"289.4"	"302.3"	""	"911"	"43"	"36.000"	"29.000"	"0.00224640667701473"	""	"0"	"0.003393"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADEFVEK"	"[K].aADEFVEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"456.25873"	"1366.76163"	"1366.76185"	"-0.16"	"-0.00007"	"5/64"	"5"	"64"	"1473831.2565918"	"HCD"	"MS2"	"4.225687"	"69.6"	"100.000"	"58.5649"	"18813"	"18813"	"18795"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"106.0"	""	"93.3"	""	"124.1"	""	"92.5"	"0.1"	"108.7"	"133.1"	""	"911"	"21"	"36.000"	"29.000"	"0.405031109184296"	"23"	"0.007808"	"0.096"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELDFQK"	"[K].eELDFQk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.2800"	"0.0000"	"1"	"1"	"1"	"683.88452"	"1366.76177"	"1366.76185"	"-0.06"	"-0.00004"	"5/56"	"5"	"56"	"551044.955200195"	"HCD"	"MS2"	"21.85103"	"49.0"	"100.000"	"67.5316"	"22422"	"22422"	"22401"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.3"	""	"23.7"	""	"20.3"	""	"101.3"	""	"139.5"	"158.8"	""	"911"	"25"	"36.000"	"29.000"	"0.130163249250729"	""	"0.003449"	"0.03354"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELDFQK"	"[K].eELDFQk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"683.88477"	"1366.76225"	"1366.76185"	"0.29"	"0.00020"	"4/56"	"4"	"56"	"379152.311523438"	"HCD"	"MS2"	"34.23811"	"34.2"	"100.000"	"67.7009"	"22506"	"22506"	"22486"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.6"	""	"22.0"	""	"25.8"	""	"53.7"	""	"80.4"	"109.4"	""	"975"	"15"	"36.000"	"29.000"	"1.40596535777422"	"24"	"0.006189"	"0.07018"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SATMELEK"	"[K].sATMELEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.2895"	"0.0000"	"1"	"1"	"1"	"683.88617"	"1366.76506"	"1366.76522"	"-0.12"	"-0.00008"	"7/68"	"7"	"68"	"506122.71673584"	"HCD"	"MS2"	"0"	"46.0"	"100.000"	"54.8417"	"17310"	"17310"	"17284"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.0"	""	"57.3"	""	"61.5"	""	"48.8"	"1.4"	"93.9"	"105.4"	""	"955"	"38"	"36.000"	"29.000"	"0.00714452525785092"	""	"0"	"0.00263"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEWDVAEAR"	"[K].yEWDVAEAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.34259"	"1367.67790"	"1367.67930"	"-1.02"	"-0.00070"	"5/74"	"5"	"74"	"2234154.96105957"	"HCD"	"MS2"	"29.4698"	"106.0"	"100.000"	"69.3167"	"23164"	"23164"	"23145"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"167.0"	""	"144.2"	""	"166.8"	""	"135.7"	"0.9"	"192.7"	"196.0"	""	"549"	"13"	"34.000"	"27.000"	"1.50848969873918"	"13"	"0.000936"	"0.01149"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEWDVAEAR"	"[K].yEWDVAEAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"684.34259"	"1367.67790"	"1367.67930"	"-1.02"	"-0.00070"	"7/74"	"7"	"74"	"8233911.16772461"	"HCD"	"MS2"	"0.3994513"	"373.6"	"100.000"	"69.0083"	"23039"	"23039"	"23023"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"584.4"	""	"429.7"	""	"511.1"	""	"605.3"	""	"679.2"	"735.9"	""	"549"	"39"	"34.000"	"27.000"	"0.00333075239452636"	"22"	"0"	"0.0007603"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEWDVAEAR"	"[K].yEWDVAEAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"684.34271"	"1367.67815"	"1367.67930"	"-0.84"	"-0.00057"	"7/74"	"7"	"74"	"7596522.04107666"	"HCD"	"MS2"	"0.371813"	"326.6"	"100.000"	"69.1342"	"23076"	"23076"	"23059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"501.1"	""	"382.9"	""	"455.9"	""	"519.6"	""	"614.4"	"623.7"	""	"555"	"41"	"34.000"	"27.000"	"0.00207617036391845"	"21"	"0"	"0.001244"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEWDVAEAR"	"[K].yEWDVAEAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"684.34290"	"1367.67851"	"1367.67930"	"-0.57"	"-0.00039"	"7/74"	"7"	"74"	"917741.594299316"	"HCD"	"MS2"	"43.67147"	"50.7"	"100.000"	"68.8369"	"22954"	"22954"	"22933"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"73.7"	""	"60.6"	""	"67.2"	""	"80.1"	""	"92.5"	"107.4"	""	"541"	"37"	"34.000"	"27.000"	"0.00506019518968948"	"20"	"0"	"0.0005929"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEWDVAEAR"	"[K].yEWDVAEAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.34308"	"1367.67888"	"1367.67930"	"-0.30"	"-0.00021"	"6/74"	"6"	"74"	"2375384.95513916"	"HCD"	"MS2"	"31.74661"	"119.7"	"100.000"	"69.4544"	"23206"	"23206"	"23187"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"205.8"	""	"157.0"	""	"182.8"	""	"153.0"	""	"211.0"	"224.5"	""	"545"	"13"	"34.000"	"27.000"	"1.28637178744328"	"13"	"0.001374"	"0.01726"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEWDVAEAR"	"[K].yEWDVAEAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"684.34326"	"1367.67925"	"1367.67930"	"-0.04"	"-0.00002"	"7/74"	"7"	"74"	"924763.716491699"	"HCD"	"MS2"	"46.43469"	"53.4"	"100.000"	"68.6786"	"22904"	"22904"	"22879"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"85.7"	""	"53.0"	""	"79.9"	""	"90.3"	""	"94.8"	"106.0"	""	"549"	"32"	"34.000"	"27.000"	"0.0172005505852556"	"18"	"0"	"0.001716"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEWDVAEAR"	"[K].yEWDVAEAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"684.34332"	"1367.67937"	"1367.67930"	"0.05"	"0.00004"	"7/74"	"7"	"74"	"1267321.60748291"	"HCD"	"MS2"	"29.35588"	"70.9"	"100.000"	"68.7066"	"22915"	"22915"	"22895"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.3"	""	"82.4"	""	"100.3"	""	"121.2"	""	"119.3"	"135.1"	""	"556"	"31"	"34.000"	"27.000"	"0.0197262619493822"	"18"	"0"	"0.0007447"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGMQLQGYR"	"[R].dAGMQLQGYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"684.34979"	"1367.69231"	"1367.69390"	"-1.16"	"-0.00080"	"9/82"	"9"	"82"	"931947.237915039"	"HCD"	"MS2"	"17.25419"	"56.4"	"100.000"	"50.6800"	"15604"	"15604"	"15582"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"101.1"	""	"77.1"	""	"86.7"	""	"83.5"	"1.0"	"90.2"	"93.8"	""	"623"	"48"	"34.000"	"27.000"	"0.000453375503601283"	"19"	"0"	"4.228E-05"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGMQLQGYR"	"[R].dAGMQLQGYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"684.34985"	"1367.69243"	"1367.69390"	"-1.07"	"-0.00073"	"9/82"	"9"	"82"	"3536928.9331665"	"HCD"	"MS2"	"0.8651242"	"181.0"	"100.000"	"50.6561"	"15605"	"15605"	"15588"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"344.8"	""	"267.4"	""	"304.0"	""	"238.1"	""	"260.2"	"297.0"	""	"625"	"54"	"34.000"	"27.000"	"0.000129972065779382"	"20"	"0"	"7.862E-05"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGMQLQGYR"	"[R].dAGMQLQGYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"684.35022"	"1367.69316"	"1367.69390"	"-0.54"	"-0.00037"	"8/82"	"8"	"82"	"1409819.222229"	"HCD"	"MS2"	"0"	"86.2"	"100.000"	"50.3501"	"15480"	"15480"	"15464"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"167.8"	""	"131.7"	""	"136.0"	""	"107.9"	"0.1"	"127.6"	"142.3"	""	"623"	"45"	"34.000"	"27.000"	"0.000934239124664654"	"20"	"0"	"3.926E-05"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGMQLQGYR"	"[R].dAGMQLQGYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"684.35034"	"1367.69341"	"1367.69390"	"-0.36"	"-0.00025"	"8/82"	"8"	"82"	"3964823.56005859"	"HCD"	"MS2"	"0"	"203.7"	"100.000"	"50.9928"	"15731"	"15731"	"15714"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"389.3"	""	"306.7"	""	"324.9"	""	"263.4"	"1.0"	"315.5"	"322.5"	""	"631"	"44"	"34.000"	"28.000"	"0.0013365935578863"	"20"	"0"	"6.78E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGETWDSK"	"[R].sGETWDSk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"684.36389"	"1367.72051"	"1367.72072"	"-0.15"	"-0.00010"	"6/68"	"6"	"68"	"510972.260803223"	"HCD"	"MS2"	"0"	"48.0"	"100.000"	"44.5948"	"13136"	"13136"	"13112"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"84.2"	""	"53.0"	""	"64.0"	""	"69.6"	""	"100.0"	"87.6"	""	"767"	"27"	"35.000"	"28.000"	"0.0766947027004158"	"22"	"0.0008629"	"0.01023"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGETWDSK"	"[R].sGETWDSk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"684.36407"	"1367.72087"	"1367.72072"	"0.11"	"0.00008"	"7/68"	"7"	"68"	"1412811.58288574"	"HCD"	"MS2"	"18.54904"	"130.6"	"100.000"	"44.2459"	"12998"	"12998"	"12976"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"231.1"	""	"155.0"	""	"184.6"	""	"200.2"	""	"230.5"	"236.2"	""	"810"	"39"	"36.000"	"29.000"	"0.00528999209693395"	"25"	"0"	"0.002377"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGETWDSK"	"[R].sGETWDSk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"684.36414"	"1367.72099"	"1367.72072"	"0.20"	"0.00014"	"7/68"	"7"	"68"	"1175351.2510376"	"HCD"	"MS2"	"23.30864"	"117.0"	"100.000"	"44.3586"	"13029"	"13029"	"13003"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"198.6"	""	"144.3"	""	"149.9"	""	"205.1"	""	"204.6"	"205.4"	""	"810"	"27"	"36.000"	"29.000"	"0.0778852150208614"	"28"	"0.0002479"	"0.005528"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGETWDSK"	"[R].sGETWDSk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"684.36426"	"1367.72124"	"1367.72072"	"0.38"	"0.00026"	"6/68"	"6"	"68"	"656787.422058105"	"HCD"	"MS2"	"4.870646"	"65.5"	"100.000"	"44.6813"	"13159"	"13159"	"13139"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"110.8"	""	"81.2"	""	"94.4"	""	"99.8"	""	"115.0"	"119.6"	""	"793"	"25"	"35.000"	"28.000"	"0.114879673252358"	"23"	"0.0006732"	"0.009004"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVSSEDYGR"	"[K].lLVSSEDYGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.36963"	"1367.73198"	"1367.73681"	"-3.53"	"-0.00241"	"8/78"	"8"	"78"	"1479287.68341064"	"HCD"	"MS2"	"5.665241"	"66.2"	"100.000"	"64.8270"	"21336"	"21336"	"21310"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"106.6"	""	"106.5"	""	"93.5"	""	"85.1"	""	"107.9"	"131.8"	""	"857"	"29"	"36.000"	"29.000"	"0.0555841317616625"	"14"	"0"	"0.001939"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVSSEDYGR"	"[K].lLVSSEDYGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.37012"	"1367.73296"	"1367.73681"	"-2.82"	"-0.00193"	"6/78"	"6"	"78"	"1195737.51934814"	"HCD"	"MS2"	"28.05573"	"50.7"	"100.000"	"64.8843"	"21344"	"21344"	"21319"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.7"	""	"72.0"	""	"69.9"	""	"68.6"	"0.6"	"84.3"	"101.0"	""	"843"	"28"	"36.000"	"29.000"	"0.0600893600703322"	"14"	"0"	"0.0009819"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVSSEDYGR"	"[K].lLVSSEDYGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.37115"	"1367.73503"	"1367.73681"	"-1.30"	"-0.00089"	"12/78"	"12"	"78"	"2075471.52697754"	"HCD"	"MS2"	"6.325334"	"88.0"	"100.000"	"65.1178"	"21454"	"21454"	"21437"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"130.4"	""	"124.5"	""	"125.9"	""	"103.4"	""	"157.7"	"193.9"	""	"859"	"36"	"36.000"	"29.000"	"0.0116940021181946"	"15"	"0"	"0.0002178"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVSSEDYGR"	"[K].lLVSSEDYGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.37170"	"1367.73613"	"1367.73681"	"-0.50"	"-0.00034"	"9/78"	"9"	"78"	"2409656.45550537"	"HCD"	"MS2"	"0"	"97.7"	"100.000"	"65.1639"	"21456"	"21456"	"21441"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"146.7"	""	"153.3"	""	"135.2"	""	"110.4"	""	"172.6"	"215.2"	""	"851"	"37"	"36.000"	"29.000"	"0.0080149268757791"	"15"	"0"	"0.0001685"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDEAAFQK"	"[R].tDEAAFQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"684.38129"	"1367.75530"	"1367.75710"	"-1.32"	"-0.00090"	"7/62"	"7"	"62"	"2160033.45751953"	"HCD"	"MS2"	"0"	"183.8"	"100.000"	"48.2616"	"14629"	"14629"	"14610"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"288.4"	""	"188.0"	""	"210.3"	""	"314.6"	""	"351.9"	"390.9"	""	"762"	"42"	"35.000"	"28.000"	"0.00265414701876203"	"27"	"0.0001301"	"0.004352"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDEAAFQK"	"[R].tDEAAFQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"684.38159"	"1367.75591"	"1367.75710"	"-0.87"	"-0.00060"	"12/62"	"12"	"62"	"507823.456787109"	"HCD"	"MS2"	"10.14794"	"49.2"	"100.000"	"48.5840"	"14761"	"14761"	"14735"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.3"	""	"54.4"	""	"60.5"	""	"71.7"	"1.0"	"106.0"	"113.0"	""	"766"	"30"	"35.000"	"28.000"	"0.0354159400618339"	"24"	"0.0001301"	"0.003998"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGNDAYK"	"[K].eLGNDAYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"684.38165"	"1367.75603"	"1367.75710"	"-0.78"	"-0.00054"	"7/72"	"7"	"72"	"1406526.77685547"	"HCD"	"MS2"	"20.10188"	"123.8"	"100.000"	"47.2547"	"14219"	"14219"	"14190"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"222.1"	""	"146.7"	""	"163.8"	""	"185.5"	""	"230.2"	"225.4"	""	"763"	"42"	"35.000"	"28.000"	"0.00260912293437865"	"23"	"0"	"0.00272"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDEAAFQK"	"[R].tDEAAFQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"684.38190"	"1367.75652"	"1367.75710"	"-0.43"	"-0.00029"	"7/62"	"7"	"62"	"1693347.07794189"	"HCD"	"MS2"	"10.22"	"143.8"	"100.000"	"48.5990"	"14754"	"14754"	"14732"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"243.5"	""	"143.3"	""	"151.9"	""	"231.4"	""	"276.2"	"319.5"	""	"763"	"41"	"35.000"	"28.000"	"0.00270703918478033"	"27"	"0"	"0.003055"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGNDAYK"	"[K].eLGNDAYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"684.38196"	"1367.75664"	"1367.75710"	"-0.34"	"-0.00023"	"7/72"	"7"	"72"	"1595561.96087646"	"HCD"	"MS2"	"0"	"135.0"	"100.000"	"47.5856"	"14342"	"14342"	"14321"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"217.4"	""	"179.4"	""	"179.4"	""	"203.6"	""	"256.2"	"243.1"	""	"763"	"42"	"35.000"	"28.000"	"0.00253217981358328"	"23"	"0"	"0.003195"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGNDAYK"	"[K].eLGNDAYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"684.38196"	"1367.75664"	"1367.75710"	"-0.34"	"-0.00023"	"6/72"	"6"	"72"	"1818685.18914795"	"HCD"	"MS2"	"20.7325"	"148.9"	"100.000"	"47.5450"	"14337"	"14337"	"14317"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"246.8"	""	"180.5"	""	"211.2"	""	"200.7"	""	"277.2"	"295.6"	""	"763"	"26"	"35.000"	"28.000"	"0.103871054903172"	"18"	"0.0008629"	"0.009928"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGNDAYK"	"[K].eLGNDAYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"684.38208"	"1367.75688"	"1367.75710"	"-0.16"	"-0.00011"	"6/72"	"6"	"72"	"1523689.31933594"	"HCD"	"MS2"	"26.30219"	"123.5"	"100.000"	"47.8823"	"14463"	"14463"	"14442"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"204.9"	""	"143.5"	""	"180.3"	""	"164.7"	""	"224.8"	"252.5"	""	"763"	"23"	"35.000"	"28.000"	"0.173178726752052"	"18"	"0.0008629"	"0.009803"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDEAAFQK"	"[R].tDEAAFQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"684.38226"	"1367.75725"	"1367.75710"	"0.11"	"0.00007"	"12/62"	"12"	"62"	"628578.820922852"	"HCD"	"MS2"	"5.053338"	"53.6"	"100.000"	"48.9121"	"14882"	"14882"	"14856"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"79.3"	""	"55.0"	""	"61.2"	""	"78.9"	"0.9"	"111.0"	"122.5"	""	"798"	"33"	"36.000"	"29.000"	"0.018965875515118"	"25"	"0"	"0.003307"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPSGEQVPIR"	"[R].rPSGEQVPIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"456.60284"	"1367.79398"	"1367.79566"	"-1.23"	"-0.00056"	"9/94"	"9"	"94"	"6088704.50897217"	"HCD"	"MS2"	"14.86864"	"140.6"	"100.000"	"27.2206"	"6089"	"6089"	"6074"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"166.0"	""	"160.8"	""	"185.4"	""	"261.0"	"1.1"	"289.1"	"271.2"	""	"608"	"46"	"34.000"	"27.000"	"0.000833438548266077"	"21"	"0"	"0.000126"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPSGEQVPIR"	"[R].rPSGEQVPIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"456.60309"	"1367.79471"	"1367.79566"	"-0.70"	"-0.00032"	"9/94"	"9"	"94"	"6245852.25097656"	"HCD"	"MS2"	"20.1608"	"149.4"	"100.000"	"27.2946"	"6104"	"6104"	"6089"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"196.6"	""	"175.5"	""	"207.2"	""	"249.7"	""	"299.3"	"290.1"	""	"595"	"39"	"34.000"	"27.000"	"0.00336114284615158"	"17"	"0"	"0.0002682"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYPTEDVPR"	"[R].yYPTEDVPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"684.85242"	"1368.69756"	"1368.69970"	"-1.56"	"-0.00107"	"6/68"	"6"	"68"	"988601.367675781"	"HCD"	"MS2"	"0"	"66.3"	"100.000"	"55.2301"	"17454"	"17454"	"17431"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"98.8"	""	"86.1"	""	"97.7"	""	"96.6"	""	"110.3"	"138.7"	""	"591"	"27"	"34.000"	"27.000"	"0.0633224172630978"	"18"	"0.002871"	"0.0268"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYPTEDVPR"	"[R].yYPTEDVPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"456.90411"	"1368.69779"	"1368.69970"	"-1.39"	"-0.00064"	"6/68"	"6"	"68"	"984946.913330078"	"HCD"	"MS2"	"0"	"24.7"	"100.000"	"55.5430"	"17582"	"17582"	"17554"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.7"	""	"37.1"	""	"37.3"	""	"31.6"	"1.1"	"47.4"	"44.6"	""	"593"	"35"	"34.000"	"27.000"	"0.00867011180030549"	"16"	"0.006685"	"0.07449"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYPTEDVPR"	"[R].yYPTEDVPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"684.85297"	"1368.69866"	"1368.69970"	"-0.76"	"-0.00052"	"7/68"	"7"	"68"	"1179493.5814209"	"HCD"	"MS2"	"0"	"57.1"	"100.000"	"55.6448"	"17637"	"17637"	"17621"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.5"	""	"76.1"	""	"96.5"	""	"93.3"	"1.2"	"102.4"	"100.3"	""	"600"	"36"	"34.000"	"27.000"	"0.00805603333697552"	"23"	"0"	"0.0006547"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYPTEDVPR"	"[R].yYPTEDVPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"684.85303"	"1368.69878"	"1368.69970"	"-0.67"	"-0.00046"	"14/68"	"14"	"68"	"1493101.25372314"	"HCD"	"MS2"	"16.8171"	"82.3"	"100.000"	"55.0393"	"17390"	"17390"	"17368"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"127.0"	""	"110.3"	""	"120.7"	""	"124.8"	""	"153.4"	"148.8"	""	"600"	"36"	"34.000"	"27.000"	"0.00772896347100773"	"23"	"0"	"0.0006144"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYPTEDVPR"	"[R].yYPTEDVPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"684.85327"	"1368.69927"	"1368.69970"	"-0.31"	"-0.00022"	"8/68"	"8"	"68"	"10813781.5672607"	"HCD"	"MS2"	"0.324982"	"424.5"	"100.000"	"55.3363"	"17512"	"17512"	"17495"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"595.5"	""	"574.1"	""	"632.9"	""	"679.5"	"0.6"	"781.2"	"757.0"	""	"595"	"38"	"34.000"	"27.000"	"0.00449248845863835"	"25"	"0"	"0.00123"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYPTEDVPR"	"[R].yYPTEDVPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"684.85345"	"1368.69963"	"1368.69970"	"-0.05"	"-0.00003"	"14/68"	"14"	"68"	"1261017.00842285"	"HCD"	"MS2"	"0"	"59.2"	"100.000"	"55.8332"	"17700"	"17700"	"17681"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.2"	""	"82.2"	""	"89.0"	""	"91.7"	""	"117.9"	"100.5"	""	"606"	"37"	"34.000"	"27.000"	"0.0056943299549139"	"24"	"0.0004639"	"0.007767"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYPTEDVPR"	"[R].yYPTEDVPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"684.85345"	"1368.69963"	"1368.69970"	"-0.05"	"-0.00003"	"8/68"	"8"	"68"	"10334184.9008789"	"HCD"	"MS2"	"0"	"413.9"	"100.000"	"55.5156"	"17571"	"17571"	"17554"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"593.3"	""	"550.3"	""	"604.8"	""	"666.5"	""	"771.6"	"736.6"	""	"606"	"36"	"34.000"	"27.000"	"0.00725174674190832"	"22"	"0"	"0.0007365"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEAAEYAK"	"[K].eEAAEYAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"684.87256"	"1368.73784"	"1368.74112"	"-2.39"	"-0.00164"	"14/64"	"14"	"64"	"547286.101379395"	"HCD"	"MS2"	"0"	"51.1"	"100.000"	"40.2639"	"11378"	"11378"	"11352"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.3"	""	"69.0"	""	"70.8"	""	"92.6"	""	"94.8"	"79.7"	""	"743"	"44"	"35.000"	"28.000"	"0.00136445374635038"	""	"0"	"0.001583"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEAAEYAK"	"[K].eEAAEYAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"1"	"684.87274"	"1368.73821"	"1368.74112"	"-2.13"	"-0.00146"	"5/64"	"5"	"64"	"473359.113830566"	"HCD"	"MS2"	"100"	"47.0"	"100.000"	"40.4692"	"11453"	"11453"	"11426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"73.7"	""	"58.6"	""	"55.9"	""	"91.1"	""	"95.3"	"73.5"	""	"743"	"23"	"35.000"	"28.000"	"0.166708912360159"	""	"0.001211"	"0.01423"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SADDFIDK"	"[K].sADDFIDk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"684.87390"	"1368.74053"	"1368.74112"	"-0.43"	"-0.00030"	"7/68"	"7"	"68"	"1212747.37695313"	"HCD"	"MS2"	"0"	"108.9"	"100.000"	"66.5387"	"22032"	"22032"	"22013"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"136.7"	""	"116.1"	"2.6"	"131.2"	""	"193.8"	""	"233.0"	"222.2"	""	"723"	"42"	"35.000"	"28.000"	"0.00209946336933954"	"25"	"0"	"0.001766"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SADDFIDK"	"[K].sADDFIDk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"684.87396"	"1368.74065"	"1368.74112"	"-0.34"	"-0.00023"	"7/68"	"7"	"68"	"1144146.44049072"	"HCD"	"MS2"	"6.699357"	"99.0"	"100.000"	"66.6323"	"22055"	"22055"	"22036"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"121.8"	""	"102.1"	""	"108.9"	""	"181.0"	""	"199.4"	"229.2"	""	"723"	"43"	"35.000"	"28.000"	"0.00200959389003251"	"25"	"0"	"0.0019"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVIEDHSNR"	"[K].lGVIEDHSNR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.9180"	"0.0000"	"1"	"1"	"1"	"456.91919"	"1368.74302"	"1368.74329"	"-0.20"	"-0.00009"	"8/80"	"8"	"80"	"19926217.6379395"	"HCD"	"MS2"	"4.177968"	"152.2"	"56.295"	"40.8695"	"11615"	"11615"	"11598"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"266.6"	""	"190.6"	""	"204.2"	""	"236.6"	"4.4"	"267.4"	"271.0"	""	"755"	"61"	"35.000"	"28.000"	"3.07550867217867E-05"	"22"	"0"	"0.0002204"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVIEDHSNR"	"[K].lGVIEDHSNR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"684.87524"	"1368.74321"	"1368.74329"	"-0.06"	"-0.00004"	"13/80"	"13"	"80"	"528647.589233398"	"HCD"	"MS2"	"21.50944"	"38.2"	"100.000"	"40.8114"	"11601"	"11601"	"11578"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.7"	""	"48.3"	""	"43.2"	""	"71.9"	""	"74.2"	"72.3"	""	"739"	"19"	"35.000"	"28.000"	"0.444236708591134"	"14"	"0.000936"	"0.01231"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVIEDHSNR"	"[K].lGVIEDHSNR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.9219"	"0.0000"	"1"	"1"	"1"	"456.91931"	"1368.74338"	"1368.74329"	"0.06"	"0.00003"	"8/80"	"8"	"80"	"18952790.1473389"	"HCD"	"MS2"	"3.138875"	"182.8"	"66.300"	"40.6826"	"11548"	"11548"	"11535"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"307.1"	""	"226.6"	""	"246.8"	""	"288.3"	"3.7"	"332.0"	"326.4"	""	"746"	"64"	"35.000"	"28.000"	"1.58383097351975E-05"	"22"	"0"	"2.961E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYAEELAK"	"[K].sYAEELAk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"684.89215"	"1368.77703"	"1368.77750"	"-0.35"	"-0.00024"	"14/64"	"14"	"64"	"1292187.80944824"	"HCD"	"MS2"	"0"	"111.2"	"100.000"	"58.7537"	"18890"	"18890"	"18872"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"156.2"	""	"132.3"	""	"169.7"	""	"168.1"	"0.2"	"215.5"	"212.6"	""	"668"	"43"	"35.000"	"28.000"	"0.00173678662842194"	"24"	"0"	"0.002389"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYAEELAK"	"[K].sYAEELAk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"0"	"2"	"2"	"0.5682"	"0.0000"	"1"	"1"	"1"	"684.89240"	"1368.77751"	"1368.77750"	"0.01"	"0.00001"	"14/64"	"14"	"64"	"1374194.61517334"	"HCD"	"MS2"	"0"	"120.4"	"100.000"	"58.5493"	"18822"	"18822"	"18799"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"162.6"	""	"150.6"	""	"166.8"	""	"203.4"	""	"215.0"	"243.6"	""	"695"	"44"	"35.000"	"28.000"	"0.00133338267808567"	""	"0"	"0.002242"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTVDDGLDIR"	"[K].hTVDDGLDIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.8478"	"0.0000"	"1"	"1"	"1"	"457.24649"	"1369.72492"	"1369.72731"	"-1.75"	"-0.00080"	"9/84"	"9"	"84"	"12007412.1796875"	"HCD"	"MS2"	"17.12249"	"163.6"	"100.000"	"40.5126"	"11479"	"11479"	"11459"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"255.2"	"12.1"	"207.2"	""	"217.1"	""	"280.1"	"3.7"	"289.8"	"284.6"	""	"659"	"46"	"35.000"	"28.000"	"0.000893008142708032"	"23"	"0"	"8.078E-05"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTVDDGLDIR"	"[K].hTVDDGLDIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"457.24683"	"1369.72593"	"1369.72731"	"-1.01"	"-0.00046"	"8/84"	"8"	"84"	"9489406.30041504"	"HCD"	"MS2"	"8.902786"	"138.6"	"100.000"	"40.6646"	"11531"	"11531"	"11512"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"198.1"	"14.3"	"175.2"	""	"190.3"	""	"245.5"	"3.5"	"249.2"	"236.9"	""	"671"	"45"	"35.000"	"28.000"	"0.00102965687710523"	"25"	"0"	"0.0001247"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTVDDGLDIR"	"[K].hTVDDGLDIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.36676"	"1369.72624"	"1369.72731"	"-0.78"	"-0.00053"	"7/84"	"7"	"84"	"776150.512390137"	"HCD"	"MS2"	"41.70494"	"53.1"	"100.000"	"40.5353"	"11489"	"11489"	"11459"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"80.9"	""	"75.3"	""	"69.5"	""	"83.4"	""	"100.0"	"97.3"	""	"673"	"21"	"35.000"	"28.000"	"0.281180415634815"	"14"	"0"	"0.001646"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTVDDGLDIR"	"[K].hTVDDGLDIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"685.36688"	"1369.72649"	"1369.72731"	"-0.60"	"-0.00041"	"7/84"	"7"	"84"	"1025923.60638428"	"HCD"	"MS2"	"31.08414"	"71.9"	"100.000"	"40.7476"	"11565"	"11565"	"11541"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"108.9"	""	"93.9"	""	"92.4"	""	"117.5"	""	"137.1"	"136.7"	""	"679"	"42"	"35.000"	"28.000"	"0.00229002265403444"	"18"	"0"	"0.0003215"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIPAEEALR"	"[K].eLIPAEEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"685.39703"	"1369.78679"	"1369.78885"	"-1.50"	"-0.00103"	"6/84"	"6"	"84"	"302049.045227051"	"HCD"	"MS2"	"15.94698"	"14.6"	"100.000"	"77.6652"	"26549"	"26549"	"26529"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.1"	""	"19.2"	""	"17.7"	""	"23.3"	""	"24.8"	"29.9"	""	"667"	"27"	"35.000"	"28.000"	"0.0656290077617233"	"16"	"0.003449"	"0.03525"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIPAEEALR"	"[K].eLIPAEEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.6207"	"0.0000"	"1"	"1"	"1"	"457.26721"	"1369.78708"	"1369.78885"	"-1.29"	"-0.00059"	"7/84"	"7"	"84"	"249112.565979004"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"77.3144"	"26407"	"26407"	"26380"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.7"	""	"8.7"	""	"7.4"	""	"12.0"	""	"10.4"	"12.2"	""	"667"	"29"	"35.000"	"28.000"	"0.037505575881797"	"26"	"0.006769"	"0.07834"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIPAEEALR"	"[K].eLIPAEEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"685.39740"	"1369.78752"	"1369.78885"	"-0.97"	"-0.00066"	"13/84"	"13"	"84"	"384294.382080078"	"HCD"	"MS2"	"10.17334"	"18.0"	"100.000"	"77.7150"	"26559"	"26559"	"26541"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.6"	""	"28.0"	""	"29.6"	""	"19.1"	""	"26.8"	"38.6"	""	"653"	"48"	"35.000"	"28.000"	"0.000566087005266726"	"23"	"0.0023"	"0.02351"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIPAEEALR"	"[K].eLIPAEEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"685.39740"	"1369.78752"	"1369.78885"	"-0.97"	"-0.00066"	"8/84"	"8"	"84"	"566451.902404785"	"HCD"	"MS2"	"40.54702"	"24.4"	"100.000"	"77.1015"	"26310"	"26310"	"26291"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.0"	""	"34.8"	""	"38.3"	""	"31.9"	""	"36.5"	"46.8"	""	"653"	"47"	"35.000"	"28.000"	"0.000587331353789549"	"23"	"0.0001301"	"0.00418"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIPAEEALR"	"[K].eLIPAEEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"685.39764"	"1369.78801"	"1369.78885"	"-0.61"	"-0.00042"	"14/84"	"14"	"84"	"1027232.40960693"	"HCD"	"MS2"	"13.67569"	"44.1"	"100.000"	"77.0678"	"26306"	"26306"	"26285"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.9"	""	"65.3"	""	"62.3"	""	"55.3"	""	"70.0"	"84.2"	""	"659"	"57"	"35.000"	"28.000"	"6.90010054202869E-05"	"24"	"0"	"0.001191"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIPAEEALR"	"[K].eLIPAEEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"685.39764"	"1369.78801"	"1369.78885"	"-0.61"	"-0.00042"	"11/84"	"11"	"84"	"2810455.71154785"	"HCD"	"MS2"	"0"	"102.6"	"100.000"	"77.3607"	"26425"	"26425"	"26412"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"176.4"	""	"151.6"	""	"162.5"	""	"114.6"	""	"164.2"	"203.0"	""	"659"	"49"	"35.000"	"28.000"	"0.0004579893919848"	""	"0"	"0.0001137"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIPAEEALR"	"[K].eLIPAEEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"685.39764"	"1369.78801"	"1369.78885"	"-0.61"	"-0.00042"	"9/84"	"9"	"84"	"2882845.28710938"	"HCD"	"MS2"	"0.7385632"	"102.8"	"100.000"	"77.3969"	"26430"	"26430"	"26416"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"164.7"	""	"162.4"	""	"163.4"	""	"106.8"	"0.1"	"170.9"	"204.2"	""	"659"	"57"	"35.000"	"28.000"	"6.40996146894667E-05"	"24"	"0"	"3.449E-05"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASADWGYDSK"	"[M].aSADWGYDSk.[N]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"685.82373"	"1370.64018"	"1370.64258"	"-1.75"	"-0.00120"	"7/86"	"7"	"86"	"680097.006958008"	"HCD"	"MS2"	"0"	"28.1"	"100.000"	"75.4398"	"25636"	"25636"	"25611"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.1"	""	"58.5"	""	"67.6"	""	"11.4"	""	"48.2"	"53.9"	""	"308"	"34"	"31.000"	"24.000"	"0.00600510659481877"	"17"	"0"	"0.0006759"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASADWGYDSK"	"[M].aSADWGYDSk.[N]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"685.82416"	"1370.64104"	"1370.64258"	"-1.12"	"-0.00077"	"7/86"	"7"	"86"	"832234.08013916"	"HCD"	"MS2"	"10.54932"	"32.2"	"100.000"	"75.3134"	"25596"	"25596"	"25566"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.4"	""	"68.2"	""	"72.4"	""	"9.5"	"0.4"	"54.6"	"69.8"	""	"311"	"41"	"31.000"	"24.000"	"0.00116608549551197"	"17"	"0"	"0.0005576"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASADWGYDSK"	"[M].aSADWGYDSk.[N]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.82446"	"1370.64165"	"1370.64258"	"-0.68"	"-0.00046"	"4/86"	"4"	"86"	"172159.455932617"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"76.2370"	"25969"	"25969"	"25945"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.0"	""	"17.0"	""	"17.2"	""	"10.9"	""	"19.6"	"21.3"	""	"311"	"11"	"31.000"	"24.000"	"1.12909476381167"	"13"	"0.003059"	"0.03043"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASADWGYDSK"	"[M].aSADWGYDSk.[N]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.82452"	"1370.64177"	"1370.64258"	"-0.59"	"-0.00040"	"7/86"	"7"	"86"	"835656.424377441"	"HCD"	"MS2"	"11.17285"	"37.0"	"100.000"	"75.9255"	"25843"	"25843"	"25824"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.6"	""	"65.1"	""	"79.2"	""	"20.7"	""	"65.1"	"83.1"	""	"311"	"40"	"31.000"	"24.000"	"0.00139229221042962"	"15"	"0"	"0.0002984"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASADWGYDSK"	"[M].aSADWGYDSk.[N]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"685.82507"	"1370.64287"	"1370.64258"	"0.21"	"0.00015"	"7/86"	"7"	"86"	"766800.043579102"	"HCD"	"MS2"	"6.778825"	"36.2"	"100.000"	"76.0583"	"25888"	"25888"	"25871"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.5"	""	"65.1"	""	"81.3"	""	"12.9"	"0.2"	"65.8"	"77.7"	""	"325"	"38"	"32.000"	"25.000"	"0.00249950129049243"	"17"	"0"	"0.001054"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASADWGYDSK"	"[M].aSADWGYDSk.[N]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.82520"	"1370.64311"	"1370.64258"	"0.39"	"0.00027"	"8/86"	"8"	"86"	"6090663.6260376"	"HCD"	"MS2"	"1.799678"	"217.9"	"100.000"	"75.7511"	"25763"	"25763"	"25746"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"190.6"	""	"447.7"	""	"544.6"	""	"23.5"	"1.5"	"364.0"	"491.7"	""	"324"	"54"	"32.000"	"25.000"	"6.43450310140493E-05"	"16"	"0"	"0.0002569"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASADWGYDSK"	"[M].aSADWGYDSk.[N]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9804"	"0.0000"	"1"	"1"	"1"	"685.82593"	"1370.64458"	"1370.64258"	"1.46"	"0.00100"	"8/86"	"8"	"86"	"5833343.50469971"	"HCD"	"MS2"	"1.789771"	"196.3"	"100.000"	"75.6212"	"25720"	"25720"	"25703"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"170.5"	""	"400.6"	""	"504.3"	""	"19.3"	""	"321.9"	"446.1"	""	"338"	"51"	"32.000"	"25.000"	"0.000142195778938038"	"17"	"0"	"0.0002447"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNEAQVDFR"	"[K].yNEAQVDFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08849"	"Syntaxin-3 OS=Rattus norvegicus OX=10116 GN=Stx3 PE=1 SV=1"	"Q08849"	"Syntaxin-3 OS=Rattus norvegicus OX=10116 GN=Stx3 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"685.84827"	"1370.68926"	"1370.69019"	"-0.68"	"-0.00047"	"8/86"	"8"	"86"	"981562.875976563"	"HCD"	"MS2"	"0"	"55.4"	"100.000"	"54.7461"	"17258"	"17258"	"17232"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"72.7"	""	"59.4"	""	"67.0"	""	"95.2"	""	"118.2"	"118.2"	""	"575"	"45"	"34.000"	"27.000"	"0.000854353984124682"	"21"	"0"	"0.001228"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNEAQVDFR"	"[K].yNEAQVDFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08849"	"Syntaxin-3 OS=Rattus norvegicus OX=10116 GN=Stx3 PE=1 SV=1"	"Q08849"	"Syntaxin-3 OS=Rattus norvegicus OX=10116 GN=Stx3 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"685.84851"	"1370.68974"	"1370.69019"	"-0.33"	"-0.00023"	"7/86"	"7"	"86"	"811210.671203613"	"HCD"	"MS2"	"0"	"45.2"	"100.000"	"54.4561"	"17153"	"17153"	"17129"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.1"	""	"50.2"	""	"54.5"	""	"77.7"	"1.1"	"94.7"	"98.4"	""	"567"	"42"	"34.000"	"27.000"	"0.00198405205866645"	"18"	"0"	"0.001668"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMDHTIPEV"	"[K].sLMDHTIPEV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JI92"	"Syntenin-1 OS=Rattus norvegicus OX=10116 GN=Sdcbp PE=1 SV=1"	"Q9JI92"	"Syntenin-1 OS=Rattus norvegicus OX=10116 GN=Sdcbp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.86243"	"1370.71758"	"1370.71872"	"-0.83"	"-0.00057"	"4/90"	"4"	"90"	"357810.55090332"	"HCD"	"MS2"	"11.84857"	"9.2"	"100.000"	"85.0284"	"29484"	"29484"	"29467"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.1"	""	"10.2"	""	"12.3"	""	"13.5"	""	"18.0"	"20.7"	""	"616"	"19"	"34.000"	"27.000"	"0.350389204033616"	"14"	"0.000936"	"0.01156"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMDHTIPEV"	"[K].sLMDHTIPEV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JI92"	"Syntenin-1 OS=Rattus norvegicus OX=10116 GN=Sdcbp PE=1 SV=1"	"Q9JI92"	"Syntenin-1 OS=Rattus norvegicus OX=10116 GN=Sdcbp PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"685.86255"	"1370.71782"	"1370.71872"	"-0.65"	"-0.00045"	"4/90"	"4"	"90"	"266695.939117432"	"HCD"	"MS2"	"42.71339"	"7.4"	"100.000"	"84.9452"	"29452"	"29452"	"29433"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.2"	""	"12.1"	""	"7.8"	""	"12.6"	""	"15.0"	"14.2"	""	"619"	"23"	"34.000"	"27.000"	"0.143106926123071"	"18"	"0.0008629"	"0.009979"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMDHTIPEV"	"[K].sLMDHTIPEV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JI92"	"Syntenin-1 OS=Rattus norvegicus OX=10116 GN=Sdcbp PE=1 SV=1"	"Q9JI92"	"Syntenin-1 OS=Rattus norvegicus OX=10116 GN=Sdcbp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.86267"	"1370.71807"	"1370.71872"	"-0.48"	"-0.00033"	"4/90"	"4"	"90"	"324906.484680176"	"HCD"	"MS2"	"7.036731"	"8.8"	"100.000"	"85.2227"	"29562"	"29562"	"29553"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.6"	""	"7.4"	""	"8.1"	""	"11.5"	""	"21.7"	"19.6"	""	"619"	"21"	"34.000"	"27.000"	"0.231558460408202"	"14"	"0.001134"	"0.01379"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMDHTIPEV"	"[K].sLMDHTIPEV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JI92"	"Syntenin-1 OS=Rattus norvegicus OX=10116 GN=Sdcbp PE=1 SV=1"	"Q9JI92"	"Syntenin-1 OS=Rattus norvegicus OX=10116 GN=Sdcbp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.86298"	"1370.71868"	"1370.71872"	"-0.03"	"-0.00002"	"5/90"	"5"	"90"	"147617.058044434"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"85.3691"	"29615"	"29615"	"29599"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.6"	""	"7.5"	"1.8"	"5.8"	""	"9.3"	""	"8.7"	"11.5"	""	"618"	"16"	"34.000"	"27.000"	"0.751551038803809"	"14"	"0.005921"	"0.06731"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGIHEDSTNR"	"[K].lGIHEDSTNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"685.86420"	"1370.72112"	"1370.72256"	"-1.05"	"-0.00072"	"15/80"	"15"	"80"	"1117159.58666992"	"HCD"	"MS2"	"0"	"58.4"	"100.000"	"28.1411"	"6463"	"6463"	"6440"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"92.6"	""	"72.9"	""	"78.4"	""	"89.8"	"1.5"	"105.7"	"112.5"	""	"620"	"49"	"34.000"	"27.000"	"0.000389369288745411"	""	"0"	"0.0001849"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGIHEDSTNR"	"[K].lGIHEDSTNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"685.86432"	"1370.72136"	"1370.72256"	"-0.87"	"-0.00060"	"8/80"	"8"	"80"	"1320234.1149292"	"HCD"	"MS2"	"0"	"66.5"	"100.000"	"28.2287"	"6484"	"6484"	"6464"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"124.1"	""	"75.0"	""	"86.8"	""	"106.4"	""	"122.2"	"119.4"	""	"624"	"47"	"34.000"	"27.000"	"0.00057697180912116"	""	"0"	"0.0003827"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGIHEDSTNR"	"[K].lGIHEDSTNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.7292"	"0.0000"	"1"	"1"	"1"	"457.57867"	"1370.72147"	"1370.72256"	"-0.79"	"-0.00036"	"7/80"	"7"	"80"	"8345821.4899292"	"HCD"	"MS2"	"22.37597"	"135.4"	"100.000"	"28.1345"	"6446"	"6446"	"6427"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"211.8"	""	"142.0"	""	"158.5"	""	"231.6"	""	"279.4"	"270.8"	""	"624"	"48"	"34.000"	"27.000"	"0.000535987416793167"	""	"0"	"8.247E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGIHEDSTNR"	"[K].lGIHEDSTNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.7400"	"0.0000"	"1"	"1"	"1"	"457.57883"	"1370.72193"	"1370.72256"	"-0.46"	"-0.00021"	"7/80"	"7"	"80"	"8703432.0670166"	"HCD"	"MS2"	"35.34381"	"140.7"	"100.000"	"28.0746"	"6436"	"6436"	"6418"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"225.9"	""	"160.5"	""	"168.3"	""	"237.6"	""	"278.6"	"264.8"	""	"625"	"50"	"34.000"	"27.000"	"0.000344231034231693"	""	"0"	"4.647E-05"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLGIEIPAEK"	"[R].GDLGIEIPAEk.[V]"	"K11(TMT6plex)"	"2"	"2"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2;Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2; Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"685.89020"	"1370.77312"	"1370.77286"	"0.19"	"0.00013"	"9/96"	"9"	"96"	"446339.860839844"	"HCD"	"MS2"	"39.84029"	"18.3"	"100.000"	"78.8588"	"27020"	"27020"	"27001"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.7"	""	"26.6"	""	"23.7"	""	"32.7"	""	"26.9"	"34.7"	""	"746"	"30"	"35.000"	"28.000"	"0.0334740940348779"	"18"	"0.0001301"	"0.004379"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VISAEEALPGR"	"[K].vISAEEALPGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q923M1"	"Mitochondrial peptide methionine sulfoxide reductase OS=Rattus norvegicus OX=10116 GN=Msra PE=1 SV=1"	"Q923M1"	"Mitochondrial peptide methionine sulfoxide reductase OS=Rattus norvegicus OX=10116 GN=Msra PE=1 SV=1"	"0"	"2"	"2"	"0.8070"	"0.0000"	"1"	"1"	"1"	"685.89532"	"1370.78337"	"1370.78410"	"-0.53"	"-0.00036"	"8/86"	"8"	"86"	"1061935.98010254"	"HCD"	"MS2"	"17.82753"	"54.8"	"100.000"	"66.2690"	"21922"	"21922"	"21901"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"85.5"	""	"75.9"	""	"71.6"	""	"93.4"	""	"91.0"	"104.8"	""	"684"	"57"	"35.000"	"28.000"	"6.1238720208007E-05"	"27"	"0"	"0.0002134"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEGTPLVDGR"	"[K].vVEGTPLVDGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O08984"	"Delta(14)-sterol reductase OS=Rattus norvegicus OX=10116 GN=Lbr PE=1 SV=1"	"O08984"	"Delta(14)-sterol reductase OS=Rattus norvegicus OX=10116 GN=Lbr PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"685.89587"	"1370.78447"	"1370.78410"	"0.27"	"0.00019"	"16/92"	"16"	"92"	"878065.07232666"	"HCD"	"MS2"	"0"	"36.8"	"100.000"	"60.0211"	"19397"	"19397"	"19382"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.4"	""	"22.5"	""	"23.5"	""	"80.2"	""	"102.0"	"100.1"	""	"685"	"46"	"35.000"	"28.000"	"0.000928240633922612"	""	"0"	"0.001953"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VISAEEALPGR"	"[K].vISAEEALPGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q923M1"	"Mitochondrial peptide methionine sulfoxide reductase OS=Rattus norvegicus OX=10116 GN=Msra PE=1 SV=1"	"Q923M1"	"Mitochondrial peptide methionine sulfoxide reductase OS=Rattus norvegicus OX=10116 GN=Msra PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"685.89587"	"1370.78447"	"1370.78410"	"0.27"	"0.00019"	"8/86"	"8"	"86"	"944939.215698242"	"HCD"	"MS2"	"27.96708"	"48.1"	"100.000"	"66.3235"	"21929"	"21929"	"21911"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"70.9"	""	"66.3"	""	"62.6"	""	"78.5"	"0.7"	"86.3"	"90.4"	""	"685"	"55"	"35.000"	"28.000"	"0.000119580558051416"	"27"	"0"	"0.0001247"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"457.60577"	"1370.80277"	"1370.80439"	"-1.18"	"-0.00054"	"12/62"	"12"	"62"	"8636120.55841064"	"HCD"	"MS2"	"8.781321"	"299.0"	"100.000"	"39.9561"	"11253"	"11253"	"11236"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"314.5"	""	"235.5"	""	"273.4"	""	"657.1"	""	"722.0"	"650.7"	""	"529"	"36"	"34.000"	"27.000"	"0.00720154495986607"	"23"	"0"	"0.001322"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"457.60580"	"1370.80286"	"1370.80439"	"-1.11"	"-0.00051"	"12/62"	"12"	"62"	"18122512.0585327"	"HCD"	"MS2"	"33.53893"	"590.6"	"100.000"	"39.4834"	"11050"	"11050"	"11025"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"671.6"	""	"495.2"	""	"489.0"	""	"1402.6"	""	"1350.7"	"1212.0"	""	"512"	"42"	"34.000"	"27.000"	"0.00177108728555248"	"24"	"0"	"0.0006708"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"685.90515"	"1370.80303"	"1370.80439"	"-0.99"	"-0.00068"	"14/62"	"14"	"62"	"3171555.81903076"	"HCD"	"MS2"	"3.328965"	"203.8"	"100.000"	"39.6546"	"11129"	"11129"	"11110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"214.9"	""	"162.1"	""	"186.1"	""	"450.6"	"3.2"	"495.9"	"427.3"	""	"512"	"46"	"34.000"	"27.000"	"0.000661058608802456"	"20"	"0"	"0.002753"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"685.90515"	"1370.80303"	"1370.80439"	"-0.99"	"-0.00068"	"7/62"	"7"	"62"	"5258453.48370361"	"HCD"	"MS2"	"2.728481"	"307.1"	"100.000"	"39.3631"	"11010"	"11010"	"10991"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"335.2"	""	"241.0"	""	"259.3"	""	"719.2"	"2.2"	"720.1"	"646.1"	""	"512"	"43"	"34.000"	"27.000"	"0.00133425846042901"	"18"	"0"	"0.002827"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"457.60596"	"1370.80332"	"1370.80439"	"-0.78"	"-0.00036"	"11/62"	"11"	"62"	"32064016.6293335"	"HCD"	"MS2"	"8.01794"	"944.8"	"89.402"	"39.2825"	"10977"	"10977"	"10962"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1036.9"	""	"788.4"	""	"775.8"	""	"2227.9"	"1.3"	"2217.7"	"1943.1"	""	"512"	"37"	"34.000"	"27.000"	"0.00517892909741638"	"22"	"0"	"0.0007271"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"685.90570"	"1370.80412"	"1370.80439"	"-0.19"	"-0.00013"	"7/62"	"7"	"62"	"2667114.88366699"	"HCD"	"MS2"	"0"	"165.1"	"100.000"	"39.8806"	"11212"	"11212"	"11196"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"157.5"	""	"124.6"	""	"145.0"	""	"361.7"	""	"412.9"	"373.8"	""	"512"	"43"	"34.000"	"27.000"	"0.00141331824455874"	"18"	"0"	"0.002808"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7250"	"0.0000"	"1"	"1"	"1"	"457.60626"	"1370.80423"	"1370.80439"	"-0.11"	"-0.00005"	"6/62"	"6"	"62"	"13708271.8873901"	"HCD"	"MS2"	"5.358536"	"323.6"	"68.861"	"40.1085"	"11306"	"11306"	"11289"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"310.2"	""	"256.4"	""	"272.4"	""	"731.4"	""	"797.0"	"719.9"	""	"512"	"40"	"34.000"	"27.000"	"0.00251327473413116"	"26"	"0"	"0.0007391"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"685.90576"	"1370.80425"	"1370.80439"	"-0.10"	"-0.00007"	"7/62"	"7"	"62"	"4887548.22912598"	"HCD"	"MS2"	"0"	"295.6"	"100.000"	"39.5823"	"11090"	"11090"	"11070"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"321.6"	""	"237.7"	""	"242.1"	""	"671.6"	""	"697.9"	"644.8"	""	"510"	"43"	"34.000"	"27.000"	"0.00136628147665902"	"18"	"0"	"0.003778"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"457.60678"	"1370.80579"	"1370.80439"	"1.02"	"0.00047"	"12/62"	"12"	"62"	"202439888.189453"	"HCD"	"MS2"	"3.897352"	"331.7"	"5.096"	"39.6479"	"11127"	"11127"	"11110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"335.9"	""	"232.0"	""	"281.4"	""	"752.7"	""	"840.9"	"721.2"	""	"531"	"42"	"34.000"	"27.000"	"0.00170633588947669"	"25"	"0"	"0.002695"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7674"	"0.0000"	"1"	"1"	"1"	"457.60727"	"1370.80725"	"1370.80439"	"2.09"	"0.00096"	"11/62"	"11"	"62"	"298707179.734375"	"HCD"	"MS2"	"4.116617"	"361.1"	"3.594"	"39.8050"	"11182"	"11182"	"11165"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"356.4"	""	"270.2"	""	"284.4"	""	"825.4"	""	"889.4"	"821.2"	""	"514"	"43"	"34.000"	"27.000"	"0.00136123505080156"	"25"	"0"	"0.001322"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YETTGLSESR"	"[R].yETTGLSESR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"2"	"2"	"0.9574"	"0.0000"	"1"	"1"	"1"	"686.35052"	"1371.69377"	"1371.69534"	"-1.14"	"-0.00078"	"8/86"	"8"	"86"	"587620.449829102"	"HCD"	"MS2"	"28.96737"	"39.5"	"100.000"	"39.0993"	"10894"	"10894"	"10868"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.9"	""	"57.9"	""	"56.7"	""	"54.8"	""	"68.7"	"78.2"	""	"491"	"47"	"33.000"	"26.000"	"0.000447766394919471"	"18"	"0"	"0.0001856"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YETTGLSESR"	"[R].yETTGLSESR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"686.35114"	"1371.69499"	"1371.69534"	"-0.25"	"-0.00017"	"8/86"	"8"	"86"	"936233.854675293"	"HCD"	"MS2"	"13.56974"	"62.6"	"100.000"	"38.9467"	"10841"	"10841"	"10812"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"101.8"	""	"88.2"	""	"92.3"	""	"81.5"	"1.8"	"107.2"	"119.9"	""	"514"	"39"	"34.000"	"27.000"	"0.00312559802166117"	"21"	"0"	"0.0002971"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDTSGEYK"	"[K].nDTSGEYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"686.36005"	"1371.71282"	"1371.71563"	"-2.05"	"-0.00141"	"12/78"	"12"	"78"	"1704070.07635498"	"HCD"	"MS2"	"0"	"162.9"	"100.000"	"29.9895"	"7213"	"7213"	"7185"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"232.6"	""	"164.5"	""	"179.7"	""	"283.7"	""	"340.7"	"348.6"	""	"661"	"39"	"35.000"	"28.000"	"0.00455167729469449"	"24"	"0.0002479"	"0.005164"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDTSGEYK"	"[K].nDTSGEYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"686.36096"	"1371.71465"	"1371.71563"	"-0.72"	"-0.00049"	"12/78"	"12"	"78"	"698946.308044434"	"HCD"	"MS2"	"0"	"72.3"	"100.000"	"30.3201"	"7335"	"7335"	"7317"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"110.5"	""	"70.9"	""	"87.4"	""	"120.7"	""	"149.7"	"152.6"	""	"648"	"33"	"35.000"	"28.000"	"0.0162011189332541"	"23"	"0"	"0.003549"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDTSGEYK"	"[K].nDTSGEYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"686.36115"	"1371.71501"	"1371.71563"	"-0.45"	"-0.00031"	"12/78"	"12"	"78"	"876233.043273926"	"HCD"	"MS2"	"0"	"79.5"	"100.000"	"30.2762"	"7329"	"7329"	"7311"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"120.9"	""	"71.7"	""	"85.7"	""	"141.3"	"0.5"	"164.5"	"170.6"	""	"648"	"33"	"35.000"	"28.000"	"0.0148437971295509"	"20"	"0"	"0.002579"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDTSGEYK"	"[K].nDTSGEYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"686.36145"	"1371.71562"	"1371.71563"	"0.00"	"0.00000"	"7/78"	"7"	"78"	"1457332.16442871"	"HCD"	"MS2"	"0"	"136.6"	"100.000"	"30.0151"	"7212"	"7212"	"7181"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"214.6"	""	"137.1"	""	"152.1"	""	"240.2"	""	"278.1"	"275.4"	""	"671"	"44"	"35.000"	"28.000"	"0.00137940731430567"	"23"	"0"	"0.002843"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQPMTPEAVR"	"[R].nQPMTPEAVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"686.36530"	"1371.72331"	"1371.72520"	"-1.37"	"-0.00094"	"8/94"	"8"	"94"	"1416738.50927734"	"HCD"	"MS2"	"0"	"67.8"	"100.000"	"36.6242"	"9899"	"9899"	"9875"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"104.0"	""	"99.9"	""	"88.5"	""	"80.9"	""	"118.2"	"151.9"	""	"711"	"41"	"35.000"	"28.000"	"0.00270295991452235"	"21"	"0"	"0.002277"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQPMTPEAVR"	"[R].nQPMTPEAVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"686.36584"	"1371.72441"	"1371.72520"	"-0.57"	"-0.00039"	"8/94"	"8"	"94"	"928869.65423584"	"HCD"	"MS2"	"0"	"50.0"	"100.000"	"36.8000"	"9965"	"9965"	"9940"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.3"	""	"89.3"	""	"66.5"	""	"53.0"	""	"96.5"	"95.5"	""	"706"	"24"	"35.000"	"28.000"	"0.141180496665667"	"19"	"0.001374"	"0.01617"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQPMTPEAVR"	"[R].nQPMTPEAVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"686.36639"	"1371.72551"	"1371.72520"	"0.23"	"0.00016"	"7/94"	"7"	"94"	"957147.643188477"	"HCD"	"MS2"	"0"	"53.0"	"100.000"	"36.9255"	"10022"	"10022"	"9999"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"82.0"	""	"86.9"	""	"75.4"	""	"57.6"	""	"98.5"	"102.2"	""	"714"	"31"	"35.000"	"28.000"	"0.0281623061989824"	"20"	"0.000936"	"0.01251"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQPMTPEAVR"	"[R].nQPMTPEAVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"686.36658"	"1371.72588"	"1371.72520"	"0.49"	"0.00034"	"13/94"	"13"	"94"	"1165744.17431641"	"HCD"	"MS2"	"0"	"58.9"	"100.000"	"37.0966"	"10086"	"10086"	"10064"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"94.6"	""	"89.9"	""	"76.1"	""	"66.7"	"0.3"	"113.3"	"117.6"	""	"713"	"32"	"35.000"	"28.000"	"0.0214812492435508"	"20"	"0.000936"	"0.01196"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATLGGSQALGLDR"	"[R].LATLGGSQALGLDR.[E]"	""	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8866"	"0.0000"	"1"	"1"	"1"	"686.38495"	"1371.76262"	"1371.75905"	"2.60"	"0.00178"	"10/136"	"10"	"136"	"586088.357910156"	"HCD"	"MS2"	"22.52989"	"22.9"	"100.000"	"63.5909"	"20837"	"20837"	"20811"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.3"	""	"22.9"	""	"33.3"	""	"33.2"	""	"42.5"	"51.4"	"NoQuanLabels"	"688"	"97"	"35.000"	"28.000"	"6.34685304197737E-09"	""	"0"	"5.63E-06"	"0.957"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATLGGSQALGLDR"	"[R].LATLGGSQALGLDR.[E]"	""	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8310"	"0.0000"	"1"	"1"	"1"	"686.38544"	"1371.76360"	"1371.75905"	"3.31"	"0.00227"	"10/136"	"10"	"136"	"560322.777038574"	"HCD"	"MS2"	"36.54062"	"22.7"	"100.000"	"63.7007"	"20867"	"20867"	"20843"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.8"	""	"24.6"	""	"32.8"	""	"41.7"	""	"43.3"	"48.5"	"NoQuanLabels"	"705"	"71"	"35.000"	"28.000"	"2.68015012621414E-06"	""	"0"	"2.1E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLDEANALLR"	"[K].qLDEANALLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"686.39319"	"1371.77910"	"1371.77934"	"-0.18"	"-0.00012"	"8/92"	"8"	"92"	"322923.338378906"	"HCD"	"MS2"	"0"	"20.9"	"100.000"	"72.2620"	"24364"	"24364"	"24341"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.9"	""	"28.0"	""	"27.7"	""	"27.3"	"0.7"	"35.4"	"43.8"	""	"686"	"51"	"35.000"	"28.000"	"0.000245072239843901"	"25"	"0"	"0.0003899"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLDEANALLR"	"[K].qLDEANALLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"686.39349"	"1371.77971"	"1371.77934"	"0.27"	"0.00018"	"8/92"	"8"	"92"	"568377.280151367"	"HCD"	"MS2"	"16.35189"	"34.4"	"100.000"	"72.1119"	"24289"	"24289"	"24266"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.3"	""	"47.1"	""	"39.7"	""	"54.7"	"0.6"	"58.9"	"58.8"	""	"685"	"53"	"35.000"	"28.000"	"0.000188217749296236"	"26"	"0"	"4.603E-05"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLDEANALLR"	"[K].qLDEANALLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"2"	"2"	"0.7302"	"0.0000"	"1"	"1"	"1"	"686.39374"	"1371.78020"	"1371.77934"	"0.62"	"0.00043"	"9/92"	"9"	"92"	"481994.797851563"	"HCD"	"MS2"	"32.76904"	"28.7"	"100.000"	"71.9602"	"24241"	"24241"	"24214"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.3"	""	"33.7"	""	"37.5"	""	"44.4"	"0.8"	"58.9"	"54.5"	""	"680"	"63"	"35.000"	"28.000"	"1.61613976820554E-05"	""	"0"	"8.63E-06"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDINQLPET"	"[K].lTDINQLPET.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35550"	"Rab GTPase-binding effector protein 1 OS=Rattus norvegicus OX=10116 GN=Rabep1 PE=1 SV=1"	"O35550"	"Rab GTPase-binding effector protein 1 OS=Rattus norvegicus OX=10116 GN=Rabep1 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"686.88019"	"1372.75310"	"1372.75213"	"0.71"	"0.00049"	"6/90"	"6"	"90"	"130648.726867676"	"HCD"	"MS2"	"24.56894"	"3.3"	"100.000"	"95.0858"	"33352"	"33352"	"33333"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.6"	""	"2.8"	""	"4.9"	""	"3.5"	""	"6.2"	"7.3"	""	"777"	"20"	"35.000"	"28.000"	"0.377912296437351"	"20"	"0.001374"	"0.01657"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDINQLPET"	"[K].lTDINQLPET.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35550"	"Rab GTPase-binding effector protein 1 OS=Rattus norvegicus OX=10116 GN=Rabep1 PE=1 SV=1"	"O35550"	"Rab GTPase-binding effector protein 1 OS=Rattus norvegicus OX=10116 GN=Rabep1 PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"686.88019"	"1372.75310"	"1372.75213"	"0.71"	"0.00049"	"5/90"	"5"	"90"	"165655.819641113"	"HCD"	"MS2"	"37.62113"	"3.9"	"100.000"	"95.1680"	"33359"	"33359"	"33340"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.8"	""	"2.6"	""	"7.3"	""	"4.4"	""	"6.6"	"8.7"	""	"777"	"27"	"35.000"	"28.000"	"0.0695650374292712"	"21"	"0.0002479"	"0.005656"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQLEEERR"	"[K].aLQLEEERR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"1"	"3"	"3"	"0.7576"	"0.0000"	"1"	"1"	"1"	"458.26218"	"1372.77198"	"1372.77459"	"-1.91"	"-0.00087"	"5/80"	"5"	"80"	"3741936.10736084"	"HCD"	"MS2"	"9.654755"	"137.9"	"100.000"	"35.3293"	"9374"	"9374"	"9350"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"216.8"	""	"182.5"	""	"185.5"	""	"223.7"	"0.2"	"242.0"	"255.2"	""	"730"	"33"	"35.000"	"28.000"	"0.0193772822144311"	"23"	"0.0006732"	"0.008506"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQLEEERR"	"[K].aLQLEEERR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"1"	"3"	"3"	"0.5676"	"0.0000"	"1"	"1"	"1"	"458.26288"	"1372.77408"	"1372.77459"	"-0.37"	"-0.00017"	"6/80"	"6"	"80"	"4655557.94262695"	"HCD"	"MS2"	"15.69274"	"166.3"	"100.000"	"35.3746"	"9387"	"9387"	"9362"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"268.5"	""	"207.4"	""	"212.5"	""	"267.5"	"1.3"	"317.8"	"301.0"	""	"793"	"37"	"35.000"	"28.000"	"0.00800282263199739"	""	"0"	"0.002188"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNPEEGK"	"[K].eLNPEEGk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"687.38690"	"1373.76653"	"1373.76767"	"-0.83"	"-0.00057"	"7/76"	"7"	"76"	"1622904.83795166"	"HCD"	"MS2"	"36.38862"	"108.3"	"100.000"	"44.3865"	"13040"	"13040"	"13017"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"157.0"	""	"90.1"	""	"125.3"	""	"186.1"	""	"230.7"	"240.3"	""	"812"	"42"	"36.000"	"29.000"	"0.00273858379245356"	"27"	"0"	"0.002289"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNPEEGK"	"[K].eLNPEEGk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"687.38727"	"1373.76726"	"1373.76767"	"-0.30"	"-0.00020"	"7/76"	"7"	"76"	"1872372.51904297"	"HCD"	"MS2"	"40.48912"	"118.3"	"100.000"	"44.2413"	"12996"	"12996"	"12976"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"157.9"	""	"117.7"	""	"127.4"	""	"193.0"	"0.0"	"261.1"	"267.3"	""	"817"	"40"	"36.000"	"29.000"	"0.0043170995251378"	"23"	"0"	"0.002867"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTAEPQGQK"	"[R].gTAEPQGQk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6MG55"	"Protein ABHD16A OS=Rattus norvegicus OX=10116 GN=Abhd16a PE=2 SV=1"	"Q6MG55"	"Protein ABHD16A OS=Rattus norvegicus OX=10116 GN=Abhd16a PE=2 SV=1"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"3"	"687.39185"	"1373.77641"	"1373.77890"	"-1.81"	"-0.00124"	"7/74"	"7"	"74"	"326735.608154297"	"HCD"	"MS2"	"36.72887"	"17.9"	"100.000"	"24.3373"	"4926"	"4926"	"4906"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.9"	""	"17.9"	""	"18.3"	""	"28.4"	""	"45.1"	"36.3"	""	"866"	"6"	"36.000"	"29.000"	"10.8764682484365"	"18"	"0.008668"	"0.1086"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"687.39423"	"1373.78118"	"1373.78376"	"-1.88"	"-0.00129"	"8/100"	"8"	"100"	"244860.122192383"	"HCD"	"MS2"	"0"	"11.0"	"100.000"	"80.4047"	"27646"	"27646"	"27631"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.4"	""	"15.3"	""	"13.6"	""	"17.8"	""	"21.7"	"22.2"	""	"853"	"58"	"36.000"	"29.000"	"6.39615582341762E-05"	"26"	"0"	"0.0002781"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"687.39441"	"1373.78154"	"1373.78376"	"-1.62"	"-0.00111"	"5/100"	"5"	"100"	"210012.633972168"	"HCD"	"MS2"	"41.46"	"7.9"	"100.000"	"81.0306"	"27898"	"27898"	"27879"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.2"	""	"8.6"	""	"14.0"	""	"15.2"	""	"15.4"	"9.8"	""	"868"	"33"	"36.000"	"29.000"	"0.0233609085612069"	"22"	"0.0006732"	"0.008227"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"3"	"3"	"0.6444"	"0.0000"	"1"	"1"	"1"	"458.59885"	"1373.78199"	"1373.78376"	"-1.29"	"-0.00059"	"9/100"	"9"	"100"	"810856.28314209"	"HCD"	"MS2"	"19.1902"	"27.0"	"100.000"	"79.2280"	"27173"	"27173"	"27153"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.6"	""	"33.5"	""	"41.5"	""	"54.8"	""	"48.7"	"45.3"	""	"868"	"45"	"36.000"	"29.000"	"0.00136612276831997"	""	"0"	"0.00121"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"687.39496"	"1373.78264"	"1373.78376"	"-0.82"	"-0.00056"	"8/100"	"8"	"100"	"173245.324462891"	"HCD"	"MS2"	"47.22944"	"7.0"	"100.000"	"81.1511"	"27948"	"27948"	"27923"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.9"	""	"10.0"	""	"9.8"	""	"11.5"	""	"11.8"	"13.6"	""	"863"	"33"	"36.000"	"29.000"	"0.0194080007386454"	"22"	"0.0008629"	"0.01014"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"3"	"3"	"0.7073"	"0.0000"	"1"	"1"	"1"	"458.59915"	"1373.78290"	"1373.78376"	"-0.63"	"-0.00029"	"9/100"	"9"	"100"	"832184.421325684"	"HCD"	"MS2"	"15.78809"	"27.1"	"100.000"	"79.2485"	"27177"	"27177"	"27161"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.6"	""	"33.2"	""	"32.0"	""	"53.7"	"0.6"	"50.3"	"48.5"	""	"881"	"41"	"36.000"	"29.000"	"0.00381018368220693"	"27"	"0"	"0.0008544"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"687.39514"	"1373.78301"	"1373.78376"	"-0.55"	"-0.00038"	"8/100"	"8"	"100"	"1216568.55352783"	"HCD"	"MS2"	"5.27968"	"38.7"	"100.000"	"78.9279"	"27052"	"27052"	"27034"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.6"	""	"55.7"	""	"57.9"	""	"72.5"	""	"63.4"	"68.5"	""	"881"	"58"	"36.000"	"29.000"	"7.17704902377798E-05"	"24"	"0"	"2.18E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"687.39514"	"1373.78301"	"1373.78376"	"-0.55"	"-0.00038"	"7/100"	"7"	"100"	"1113912.79614258"	"HCD"	"MS2"	"1.578995"	"38.6"	"100.000"	"79.8111"	"27404"	"27404"	"27389"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.0"	""	"60.8"	""	"52.9"	""	"70.5"	""	"68.1"	"66.3"	""	"881"	"66"	"36.000"	"29.000"	"1.16935375005022E-05"	"27"	"0"	"1.442E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"687.39520"	"1373.78313"	"1373.78376"	"-0.46"	"-0.00032"	"8/100"	"8"	"100"	"249361.887634277"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"80.4293"	"27654"	"27654"	"27629"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.2"	""	"10.6"	""	"17.9"	""	"19.5"	""	"16.7"	"22.6"	""	"881"	"63"	"36.000"	"29.000"	"2.40406337810705E-05"	"26"	"0"	"2.471E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"687.39526"	"1373.78325"	"1373.78376"	"-0.37"	"-0.00026"	"8/100"	"8"	"100"	"354010.619628906"	"HCD"	"MS2"	"6.009979"	"15.6"	"100.000"	"80.1162"	"27530"	"27530"	"27511"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.3"	""	"21.4"	""	"20.2"	""	"27.6"	"2.4"	"29.4"	"24.9"	""	"881"	"65"	"36.000"	"29.000"	"1.54506200476106E-05"	"27"	"0"	"6.343E-05"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8361"	"0.0000"	"1"	"1"	"1"	"687.39557"	"1373.78386"	"1373.78376"	"0.07"	"0.00005"	"7/100"	"7"	"100"	"385897.37890625"	"HCD"	"MS2"	"5.564213"	"15.5"	"100.000"	"80.1273"	"27531"	"27531"	"27514"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.1"	""	"25.8"	""	"19.0"	""	"25.1"	""	"26.5"	"26.8"	""	"879"	"61"	"36.000"	"29.000"	"3.7321481877846E-05"	"26"	"0"	"3.235E-05"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8308"	"0.0000"	"1"	"1"	"1"	"687.39557"	"1373.78386"	"1373.78376"	"0.07"	"0.00005"	"8/100"	"8"	"100"	"971697.537780762"	"HCD"	"MS2"	"0"	"31.6"	"100.000"	"79.8136"	"27408"	"27408"	"27398"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.3"	""	"46.9"	""	"42.1"	""	"52.8"	"0.4"	"64.2"	"57.7"	""	"879"	"65"	"36.000"	"29.000"	"1.45867614094372E-05"	"28"	"0"	"3.55E-05"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"687.39569"	"1373.78411"	"1373.78376"	"0.25"	"0.00017"	"7/100"	"7"	"100"	"145675.21307373"	"HCD"	"MS2"	"16.56641"	"7.3"	"100.000"	"80.8331"	"27819"	"27819"	"27797"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.7"	""	"8.0"	""	"10.6"	""	"15.8"	""	"17.3"	"10.4"	""	"879"	"23"	"36.000"	"29.000"	"0.243758000845002"	"21"	"0.0001301"	"0.004609"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"687.39569"	"1373.78411"	"1373.78376"	"0.25"	"0.00017"	"8/100"	"8"	"100"	"10465895.3596802"	"HCD"	"MS2"	"0.09737763"	"198.3"	"74.731"	"79.5113"	"27288"	"27288"	"27281"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"225.5"	""	"258.1"	""	"307.0"	""	"357.6"	""	"359.6"	"373.5"	""	"879"	"75"	"36.000"	"29.000"	"1.53800900908963E-06"	"26"	"0"	"2.151E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"687.39575"	"1373.78423"	"1373.78376"	"0.34"	"0.00023"	"7/100"	"7"	"100"	"1144075.04693604"	"HCD"	"MS2"	"10.76235"	"36.6"	"100.000"	"78.9512"	"27057"	"27057"	"27039"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.2"	""	"57.2"	""	"51.8"	""	"68.2"	"1.3"	"60.5"	"62.4"	""	"879"	"66"	"36.000"	"29.000"	"1.14277012801114E-05"	"27"	"0"	"3.419E-05"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8354"	"0.0000"	"1"	"1"	"1"	"687.39624"	"1373.78520"	"1373.78376"	"1.05"	"0.00072"	"8/100"	"8"	"100"	"10646009.6921997"	"HCD"	"MS2"	"0"	"224.8"	"81.118"	"79.5203"	"27287"	"27287"	"27272"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"268.6"	""	"320.6"	""	"320.8"	""	"408.1"	""	"397.0"	"418.0"	""	"869"	"79"	"36.000"	"29.000"	"5.08147485398134E-07"	""	"0"	"1.186E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8481"	"0.0000"	"1"	"1"	"1"	"687.39661"	"1373.78594"	"1373.78376"	"1.58"	"0.00109"	"8/100"	"8"	"100"	"37971652.282959"	"HCD"	"MS2"	"0"	"285.1"	"28.385"	"79.2188"	"27170"	"27170"	"27153"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"362.9"	""	"392.1"	""	"411.0"	""	"512.0"	""	"509.0"	"515.9"	""	"866"	"79"	"36.000"	"29.000"	"5.04066570734743E-07"	""	"0"	"5.868E-06"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8354"	"0.0000"	"1"	"1"	"1"	"687.39709"	"1373.78691"	"1373.78376"	"2.29"	"0.00158"	"8/100"	"8"	"100"	"33768057.710083"	"HCD"	"MS2"	"0"	"273.0"	"32.287"	"79.2418"	"27175"	"27175"	"27161"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"331.2"	""	"394.7"	""	"390.7"	""	"515.1"	""	"475.4"	"481.9"	""	"817"	"79"	"36.000"	"29.000"	"4.77740501231618E-07"	""	"0"	"2.789E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQADGQVK"	"[K].aVQADGQVk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"687.40875"	"1373.81023"	"1373.81529"	"-3.68"	"-0.00253"	"14/76"	"14"	"76"	"1880976.1630249"	"HCD"	"MS2"	"51.11472"	"149.6"	"100.000"	"36.2980"	"9767"	"9767"	"9747"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"224.3"	""	"203.2"	""	"203.2"	""	"231.9"	""	"272.7"	"283.4"	""	"780"	"47"	"35.000"	"28.000"	"0.000771018159643625"	"26"	"0"	"0.0004777"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQADGQVK"	"[K].aVQADGQVk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"687.40918"	"1373.81108"	"1373.81529"	"-3.06"	"-0.00210"	"14/76"	"14"	"76"	"1597576.8604126"	"HCD"	"MS2"	"48.19942"	"125.2"	"100.000"	"36.4575"	"9825"	"9825"	"9806"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"194.2"	""	"163.2"	""	"184.3"	""	"195.6"	""	"213.9"	"235.2"	""	"779"	"47"	"35.000"	"28.000"	"0.000770029674823569"	"26"	"0"	"0.000354"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQTVNVDEN"	"[K].nLQTVNVDEN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"0"	"2"	"2"	"0.9592"	"0.0000"	"1"	"1"	"1"	"687.85760"	"1374.70793"	"1374.70624"	"1.23"	"0.00085"	"7/100"	"7"	"100"	"829888.291870117"	"HCD"	"MS2"	"15.23881"	"28.2"	"100.000"	"58.3627"	"18746"	"18746"	"18719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.7"	""	"39.0"	""	"36.8"	""	"50.3"	"2.1"	"48.0"	"46.7"	""	"707"	"49"	"35.000"	"28.000"	"0.000481270695251714"	"18"	"0"	"0.0004333"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAETEPK"	"[K].eLAETEPk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"687.89581"	"1374.78435"	"1374.78807"	"-2.70"	"-0.00186"	"7/66"	"7"	"66"	"478893.19329834"	"HCD"	"MS2"	"0"	"37.2"	"100.000"	"43.7541"	"12798"	"12798"	"12776"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.0"	""	"30.3"	""	"35.4"	""	"66.4"	"0.6"	"86.2"	"97.9"	""	"892"	"30"	"36.000"	"29.000"	"0.0452204478038559"	"23"	"0.0008629"	"0.009595"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAETEPK"	"[K].eLAETEPk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"687.89679"	"1374.78630"	"1374.78807"	"-1.28"	"-0.00088"	"5/66"	"5"	"66"	"414813.876525879"	"HCD"	"MS2"	"0"	"34.1"	"100.000"	"43.9062"	"12849"	"12849"	"12824"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.6"	""	"30.9"	""	"32.2"	""	"65.3"	"1.4"	"69.4"	"84.1"	""	"858"	"29"	"36.000"	"29.000"	"0.0536361123963402"	"22"	"0.002056"	"0.02239"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAALQVADGFISR"	"[R].QAALQVADGFISR.[M]"	""	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"2"	"2"	"0.8909"	"0.0000"	"1"	"1"	"1"	"688.36914"	"1375.73100"	"1375.73284"	"-1.33"	"-0.00092"	"8/128"	"8"	"128"	"489493.935424805"	"HCD"	"MS2"	"9.529573"	"2.5"	"100.000"	"108.3297"	"37790"	"37790"	"37775"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.2"	""	"3.0"	""	"3.8"	""	"6.8"	""	"3.4"	"4.6"	"NoQuanLabels"	"839"	"55"	"36.000"	"29.000"	"0.000148160339727726"	"22"	"0"	"0.0008544"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAALQVADGFISR"	"[R].QAALQVADGFISR.[M]"	""	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"688.36975"	"1375.73223"	"1375.73284"	"-0.45"	"-0.00031"	"9/128"	"9"	"128"	"365768.026367188"	"HCD"	"MS2"	"0"	"2.1"	"100.000"	"108.3643"	"37715"	"37715"	"37708"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.7"	""	""	""	"1.7"	""	"5.7"	""	"4.0"	"6.8"	"NoQuanLabels"	"831"	"52"	"36.000"	"29.000"	"0.000256785814257512"	"18"	"0"	"0.0006134"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYDYLK"	"[K].eSYDYLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"688.37909"	"1375.75090"	"1375.75095"	"-0.04"	"-0.00003"	"12/54"	"12"	"54"	"2349282.19885254"	"HCD"	"MS2"	"0"	"212.3"	"100.000"	"61.9784"	"20184"	"20184"	"20171"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"349.8"	""	"292.4"	""	"283.0"	""	"360.9"	"2.9"	"346.9"	"372.7"	""	"885"	"31"	"36.000"	"29.000"	"0.0337997334233128"	"26"	"0.004867"	"0.05253"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLENDLK"	"[R].eGLENDLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"688.39459"	"1375.78191"	"1375.78332"	"-1.02"	"-0.00070"	"7/72"	"7"	"72"	"585913.023132324"	"HCD"	"MS2"	"7.931864"	"57.9"	"100.000"	"58.2681"	"18692"	"18692"	"18671"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"84.7"	""	"64.6"	""	"67.9"	""	"104.9"	""	"111.5"	"119.9"	""	"1016"	"38"	"37.000"	"30.000"	"0.00790430540855378"	"26"	"0.0003538"	"0.006313"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLENDLK"	"[R].eGLENDLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"688.39478"	"1375.78227"	"1375.78332"	"-0.76"	"-0.00052"	"14/72"	"14"	"72"	"1944337.36132813"	"HCD"	"MS2"	"30.63394"	"153.4"	"100.000"	"57.7203"	"18483"	"18483"	"18468"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"249.8"	""	"170.7"	""	"189.7"	""	"293.2"	""	"283.7"	"265.4"	""	"1029"	"44"	"37.000"	"30.000"	"0.00201551195771954"	"28"	"0.0001301"	"0.004427"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLENDLK"	"[R].eGLENDLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.7045"	"0.0000"	"1"	"1"	"1"	"688.39520"	"1375.78313"	"1375.78332"	"-0.14"	"-0.00009"	"14/72"	"14"	"72"	"2274192.46844482"	"HCD"	"MS2"	"17.96551"	"185.3"	"100.000"	"57.9476"	"18561"	"18561"	"18543"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"300.0"	""	"199.7"	""	"235.6"	""	"360.6"	""	"336.8"	"323.5"	""	"1049"	"44"	"37.000"	"30.000"	"0.00196673339677756"	"28"	"0"	"0.003652"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLENDLK"	"[R].eGLENDLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"688.39526"	"1375.78325"	"1375.78332"	"-0.05"	"-0.00003"	"14/72"	"14"	"72"	"899103.862548828"	"HCD"	"MS2"	"7.602756"	"85.2"	"100.000"	"58.0310"	"18610"	"18610"	"18591"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"133.5"	""	"84.0"	""	"107.4"	""	"150.7"	"0.0"	"163.9"	"168.1"	""	"1053"	"41"	"37.000"	"30.000"	"0.00426970996960048"	"27"	"0"	"0.002951"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEETVQAK"	"[R].lEETVQAk.[-]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"688.41199"	"1375.81670"	"1375.81970"	"-2.18"	"-0.00150"	"7/64"	"7"	"64"	"749483.967346191"	"HCD"	"MS2"	"39.48388"	"65.4"	"100.000"	"53.1070"	"16605"	"16605"	"16577"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.2"	""	"60.1"	""	"72.7"	""	"120.9"	""	"134.8"	"141.5"	""	"963"	"43"	"36.000"	"29.000"	"0.00242435543131376"	""	"0"	"0.003643"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEETVQAK"	"[R].lEETVQAk.[-]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"688.41302"	"1375.81877"	"1375.81970"	"-0.67"	"-0.00046"	"14/64"	"14"	"64"	"810673.252197266"	"HCD"	"MS2"	"32.77159"	"71.3"	"100.000"	"53.4069"	"16716"	"16716"	"16690"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"106.3"	""	"74.4"	""	"77.4"	""	"123.9"	""	"149.3"	"146.0"	""	"945"	"46"	"36.000"	"29.000"	"0.00130737992745694"	""	"0"	"0.003015"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIAENITK"	"[R].eIAENITk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.0714"	"0.0000"	"1"	"1"	"1"	"688.41315"	"1375.81902"	"1375.81970"	"-0.50"	"-0.00034"	"7/74"	"7"	"74"	"590921.422668457"	"HCD"	"MS2"	"17.5921"	"50.1"	"100.000"	"56.7179"	"18061"	"18061"	"18036"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.3"	""	"65.8"	""	"69.4"	""	"81.4"	"2.0"	"95.1"	"84.1"	""	"945"	"42"	"36.000"	"29.000"	"0.00317250133007513"	"26"	"0"	"0.001927"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQEEIVAK"	"[R].tQEEIVAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"688.41327"	"1375.81926"	"1375.81970"	"-0.32"	"-0.00022"	"7/74"	"7"	"74"	"2460011.52301025"	"HCD"	"MS2"	"8.489454"	"168.9"	"100.000"	"45.9194"	"13675"	"13675"	"13658"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"279.2"	""	"221.4"	""	"231.5"	""	"265.9"	"0.2"	"277.1"	"323.4"	""	"943"	"47"	"36.000"	"29.000"	"0.000877974084936544"	"29"	"0"	"0.002983"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQEEIVAK"	"[R].tQEEIVAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"688.41339"	"1375.81951"	"1375.81970"	"-0.14"	"-0.00010"	"7/74"	"7"	"74"	"1163371.46862793"	"HCD"	"MS2"	"0"	"99.1"	"100.000"	"46.2349"	"13804"	"13804"	"13785"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"155.0"	""	"127.1"	""	"144.1"	""	"154.4"	"3.7"	"170.5"	"183.3"	""	"943"	"45"	"36.000"	"29.000"	"0.00142063234040376"	"25"	"0"	"0.00176"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQEEIVAK"	"[R].tQEEIVAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"688.41351"	"1375.81975"	"1375.81970"	"0.03"	"0.00002"	"7/74"	"7"	"74"	"1018501.19146729"	"HCD"	"MS2"	"0"	"81.7"	"100.000"	"46.0137"	"13702"	"13702"	"13677"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"134.6"	""	"109.6"	""	"111.1"	""	"133.5"	"0.2"	"137.4"	"146.9"	""	"959"	"45"	"36.000"	"29.000"	"0.00159877964919971"	"27"	"0"	"0.002231"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIAENITK"	"[R].eIAENITk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.3143"	"0.0000"	"1"	"1"	"1"	"688.41357"	"1375.81987"	"1375.81970"	"0.12"	"0.00009"	"7/74"	"7"	"74"	"539511.954772949"	"HCD"	"MS2"	"22.24183"	"47.1"	"100.000"	"56.5362"	"18001"	"18001"	"17974"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.1"	""	"61.5"	""	"63.7"	""	"81.8"	""	"87.9"	"87.6"	""	"959"	"35"	"36.000"	"29.000"	"0.0155163158497757"	""	"0"	"0.003625"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQEEIVAK"	"[R].tQEEIVAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"688.41388"	"1375.82048"	"1375.81970"	"0.57"	"0.00039"	"7/74"	"7"	"74"	"2727406.91564941"	"HCD"	"MS2"	"0"	"210.6"	"100.000"	"46.3062"	"13822"	"13822"	"13805"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"325.4"	""	"248.2"	""	"287.7"	""	"340.8"	"2.2"	"390.7"	"400.7"	""	"915"	"45"	"36.000"	"29.000"	"0.00133165308151547"	"27"	"0"	"0.002494"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMSVYEAYR"	"[K].eMSVYEAYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"688.83832"	"1376.66936"	"1376.67177"	"-1.75"	"-0.00120"	"7/74"	"7"	"74"	"2203053.39752197"	"HCD"	"MS2"	"39.08925"	"122.1"	"100.000"	"59.5001"	"19210"	"19210"	"19190"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"151.6"	""	"143.6"	""	"169.8"	""	"209.6"	""	"238.5"	"245.9"	""	"462"	"5"	"33.000"	"26.000"	"6.80161397407514"	"13"	"0.003507"	"0.03629"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMSVYEAYR"	"[K].eMSVYEAYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"688.83862"	"1376.66997"	"1376.67177"	"-1.31"	"-0.00090"	"6/74"	"6"	"74"	"2121931.08239746"	"HCD"	"MS2"	"39.0271"	"120.6"	"100.000"	"59.7323"	"19290"	"19290"	"19270"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"167.8"	""	"136.3"	""	"160.8"	""	"186.3"	"1.5"	"222.9"	"268.4"	""	"463"	"9"	"33.000"	"26.000"	"2.86781409781781"	"13"	"0.001812"	"0.02045"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYDGDGYK"	"[R].tYDGDGYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q566C7"	"Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nudt3 PE=1 SV=1"	"Q566C7"	"Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nudt3 PE=1 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"688.85803"	"1376.70879"	"1376.70982"	"-0.75"	"-0.00051"	"6/64"	"6"	"64"	"644189.914672852"	"HCD"	"MS2"	"0"	"66.0"	"100.000"	"42.4747"	"12278"	"12278"	"12252"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"101.3"	""	"76.4"	""	"91.4"	""	"97.7"	"0.7"	"128.5"	"129.7"	""	"720"	"25"	"35.000"	"28.000"	"0.101930111848778"	"15"	"0.006685"	"0.07526"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYDGDGYK"	"[R].tYDGDGYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q566C7"	"Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nudt3 PE=1 SV=1"	"Q566C7"	"Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nudt3 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"688.85809"	"1376.70891"	"1376.70982"	"-0.66"	"-0.00045"	"10/64"	"10"	"64"	"628339.312316895"	"HCD"	"MS2"	"0"	"69.5"	"100.000"	"42.5578"	"12301"	"12301"	"12277"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"100.0"	""	"65.1"	""	"110.9"	""	"115.9"	"0.7"	"136.7"	"129.6"	""	"717"	"19"	"35.000"	"28.000"	"0.43902490743652"	"19"	"0.001546"	"0.01941"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLPDDHAGPIR"	"[R].gLPDDHAGPIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI97"	"Alanyl-tRNA editing protein Aarsd1 OS=Rattus norvegicus OX=10116 GN=Aarsd1 PE=1 SV=1"	"Q5XI97"	"Alanyl-tRNA editing protein Aarsd1 OS=Rattus norvegicus OX=10116 GN=Aarsd1 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"459.58734"	"1376.74747"	"1376.74838"	"-0.66"	"-0.00030"	"10/82"	"10"	"82"	"5034671.68292236"	"HCD"	"MS2"	"51.40786"	"166.3"	"100.000"	"38.9268"	"10823"	"10823"	"10805"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"228.5"	""	"229.3"	""	"252.0"	""	"243.3"	""	"316.0"	"308.3"	""	"1010"	"36"	"37.000"	"30.000"	"0.0120584469787116"	"24"	"0"	"0.001242"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDDSTLIR"	"[K].gLGTDDSTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.5526"	"0.0000"	"1"	"1"	"1"	"688.88025"	"1376.75322"	"1376.75827"	"-3.67"	"-0.00253"	"10/88"	"10"	"88"	"2532735.82330322"	"HCD"	"MS2"	"0"	"200.6"	"100.000"	"62.0975"	"20217"	"20217"	"20201"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"323.5"	""	"258.2"	""	"273.7"	""	"329.7"	""	"360.3"	"357.8"	""	"1083"	"38"	"37.000"	"30.000"	"0.00838684199141108"	""	"0"	"6.745E-05"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDDSTLIR"	"[K].gLGTDDSTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.7206"	"0.0000"	"1"	"1"	"1"	"688.88214"	"1376.75701"	"1376.75827"	"-0.92"	"-0.00063"	"10/88"	"10"	"88"	"1733041.3949585"	"HCD"	"MS2"	"43.79773"	"92.2"	"100.000"	"61.2230"	"19878"	"19878"	"19857"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"149.1"	""	"124.4"	""	"128.0"	""	"129.1"	"0.4"	"171.5"	"170.5"	""	"1083"	"68"	"37.000"	"30.000"	"7.71966511935586E-06"	""	"0"	"1.862E-06"	"1.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDDSTLIR"	"[K].gLGTDDSTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.7123"	"0.0000"	"1"	"1"	"1"	"688.88226"	"1376.75725"	"1376.75827"	"-0.74"	"-0.00051"	"9/88"	"9"	"88"	"32131090.9335938"	"HCD"	"MS2"	"0"	"376.1"	"26.950"	"61.5245"	"20002"	"20002"	"19985"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"522.5"	""	"505.7"	""	"571.5"	""	"605.2"	"2.5"	"677.2"	"677.2"	""	"1117"	"73"	"37.000"	"30.000"	"2.86433082959177E-06"	""	"0"	"1.379E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDDSTLIR"	"[K].gLGTDDSTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"688.88245"	"1376.75762"	"1376.75827"	"-0.48"	"-0.00033"	"9/88"	"9"	"88"	"4622057.64483643"	"HCD"	"MS2"	"0"	"246.0"	"100.000"	"61.8020"	"20114"	"20114"	"20101"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"359.9"	""	"327.8"	""	"360.1"	""	"379.8"	""	"458.2"	"449.9"	""	"1115"	"64"	"37.000"	"30.000"	"2.0009897856459E-05"	""	"0"	"1.114E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDDSTLIR"	"[K].gLGTDDSTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"688.88251"	"1376.75774"	"1376.75827"	"-0.39"	"-0.00027"	"9/88"	"9"	"88"	"4237103.77966309"	"HCD"	"MS2"	"0"	"231.6"	"100.000"	"61.9440"	"20156"	"20156"	"20147"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"348.0"	""	"290.4"	""	"328.9"	""	"367.2"	"1.0"	"429.0"	"428.9"	""	"1113"	"66"	"37.000"	"30.000"	"1.30456333572554E-05"	""	"0"	"8.747E-06"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDDSTLIR"	"[K].gLGTDDSTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"688.88275"	"1376.75823"	"1376.75827"	"-0.04"	"-0.00002"	"9/88"	"9"	"88"	"2131615.52966309"	"HCD"	"MS2"	"51.35319"	"103.9"	"100.000"	"61.3834"	"19928"	"19928"	"19905"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"147.7"	""	"133.4"	""	"151.8"	""	"171.8"	""	"188.0"	"191.9"	""	"1112"	"64"	"37.000"	"30.000"	"2.43823067962892E-05"	""	"0"	"6.358E-06"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDDSTLIR"	"[K].gLGTDDSTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"459.59097"	"1376.75837"	"1376.75827"	"0.07"	"0.00003"	"13/88"	"13"	"88"	"761657.543823242"	"HCD"	"MS2"	"23.99442"	"22.3"	"100.000"	"61.6364"	"20032"	"20032"	"20001"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.1"	""	"35.4"	""	"28.9"	""	"31.8"	"2.7"	"34.6"	"42.7"	""	"1109"	"54"	"37.000"	"30.000"	"0.000218223516840229"	"30"	"0"	"0.0005103"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDDSTLIR"	"[K].gLGTDDSTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"688.88293"	"1376.75859"	"1376.75827"	"0.23"	"0.00016"	"9/88"	"9"	"88"	"31543780.4101563"	"HCD"	"MS2"	"0"	"386.6"	"27.084"	"61.6803"	"20050"	"20050"	"20033"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"536.8"	""	"527.2"	""	"579.4"	""	"585.4"	""	"715.1"	"719.6"	""	"1114"	"70"	"37.000"	"30.000"	"5.50624073723916E-06"	""	"0"	"9.132E-06"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLAIAEFAR"	"[R].eQLAIAEFAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"688.88965"	"1376.77202"	"1376.77353"	"-1.10"	"-0.00076"	"6/100"	"6"	"100"	"290874.38482666"	"HCD"	"MS2"	"48.0516"	"16.0"	"100.000"	"83.9157"	"29043"	"29043"	"29027"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.5"	""	"18.6"	""	"17.4"	""	"29.3"	""	"36.2"	"32.2"	""	"1116"	"35"	"37.000"	"30.000"	"0.0186910715050068"	"22"	"0"	"0.002609"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLAIAEFAR"	"[R].eQLAIAEFAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"688.88965"	"1376.77202"	"1376.77353"	"-1.10"	"-0.00076"	"7/100"	"7"	"100"	"538055.696777344"	"HCD"	"MS2"	"13.85592"	"26.2"	"100.000"	"84.1905"	"29152"	"29152"	"29139"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.3"	""	"32.4"	""	"31.4"	""	"49.3"	""	"57.4"	"49.9"	""	"1116"	"55"	"37.000"	"30.000"	"0.000158720929795594"	""	"0"	"6.195E-05"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLAIAEFAR"	"[R].eQLAIAEFAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"688.88977"	"1376.77226"	"1376.77353"	"-0.92"	"-0.00063"	"8/100"	"8"	"100"	"331709.332885742"	"HCD"	"MS2"	"2.844232"	"17.5"	"100.000"	"84.2600"	"29180"	"29180"	"29162"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.0"	""	"21.4"	""	"19.0"	""	"36.0"	""	"35.4"	"37.9"	""	"1110"	"60"	"37.000"	"30.000"	"5.47385114525322E-05"	""	"0"	"0.0001283"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLAIAEFAR"	"[R].eQLAIAEFAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"688.89014"	"1376.77300"	"1376.77353"	"-0.39"	"-0.00027"	"6/100"	"6"	"100"	"369948.923828125"	"HCD"	"MS2"	"41.54832"	"20.6"	"100.000"	"83.9502"	"29055"	"29055"	"29039"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.0"	""	"24.4"	""	"27.7"	""	"36.3"	""	"44.3"	"37.1"	""	"1104"	"38"	"37.000"	"30.000"	"0.00974852877018762"	"23"	"0"	"0.0009434"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQSEEIQK"	"[K].gQSEEIQk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"0"	"2"	"2"	"0.4571"	"0.0000"	"1"	"1"	"1"	"688.89294"	"1376.77861"	"1376.77857"	"0.03"	"0.00002"	"7/72"	"7"	"72"	"948217.263366699"	"HCD"	"MS2"	"18.95751"	"91.1"	"100.000"	"33.6339"	"8689"	"8689"	"8669"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"136.4"	""	"93.4"	""	"120.9"	""	"160.7"	""	"192.5"	"166.3"	""	"1087"	"35"	"37.000"	"30.000"	"0.0176278582029371"	""	"0"	"0.003553"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQSEEIQK"	"[K].gQSEEIQk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"688.89337"	"1376.77947"	"1376.77857"	"0.65"	"0.00045"	"7/72"	"7"	"72"	"851960.608703613"	"HCD"	"MS2"	"27.57001"	"82.8"	"100.000"	"33.6432"	"8686"	"8686"	"8667"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"134.2"	""	"90.7"	""	"94.5"	""	"165.8"	""	"160.7"	"143.6"	""	"1058"	"28"	"37.000"	"30.000"	"0.0892186550430643"	"30"	"0.0003538"	"0.006962"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDSDLK"	"[K].vLEDSDLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.3235"	"0.0000"	"1"	"1"	"1"	"459.60544"	"1376.80176"	"1376.80372"	"-1.42"	"-0.00065"	"6/62"	"6"	"62"	"1993187.72869873"	"HCD"	"MS2"	"41.45436"	"85.6"	"100.000"	"66.8524"	"22160"	"22160"	"22140"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"127.3"	""	"97.4"	""	"111.8"	""	"151.3"	""	"166.2"	"158.9"	""	"855"	"34"	"36.000"	"29.000"	"0.015343912706074"	""	"0.000936"	"0.01247"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDSDLK"	"[K].vLEDSDLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.4318"	"0.0000"	"1"	"1"	"1"	"688.90466"	"1376.80205"	"1376.80372"	"-1.21"	"-0.00083"	"14/62"	"14"	"62"	"5240479.11193848"	"HCD"	"MS2"	"7.562719"	"395.5"	"100.000"	"66.8430"	"22157"	"22157"	"22140"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"583.2"	""	"450.4"	""	"515.8"	""	"702.2"	"1.5"	"726.8"	"768.7"	""	"854"	"44"	"36.000"	"29.000"	"0.00181312553805076"	""	"0.0002479"	"0.005186"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDSDLK"	"[K].vLEDSDLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"459.60562"	"1376.80231"	"1376.80372"	"-1.02"	"-0.00047"	"8/62"	"8"	"62"	"1034111.16821289"	"HCD"	"MS2"	"26.55754"	"52.5"	"100.000"	"67.2188"	"22310"	"22310"	"22284"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"77.2"	""	"64.2"	""	"65.2"	""	"93.3"	"1.8"	"90.5"	"105.7"	""	"854"	"18"	"36.000"	"29.000"	"0.64184161952044"	"26"	"0.005921"	"0.06832"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDSDLK"	"[K].vLEDSDLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.3158"	"0.0000"	"1"	"1"	"1"	"459.60562"	"1376.80231"	"1376.80372"	"-1.02"	"-0.00047"	"6/62"	"6"	"62"	"2110809.6786499"	"HCD"	"MS2"	"47.7912"	"93.3"	"100.000"	"66.9894"	"22201"	"22201"	"22179"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"137.9"	""	"113.0"	""	"116.5"	""	"157.2"	"0.9"	"180.5"	"178.5"	""	"854"	"38"	"36.000"	"29.000"	"0.00698920654649675"	""	"0.001036"	"0.01363"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDSDLK"	"[K].vLEDSDLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.4222"	"0.0000"	"1"	"1"	"1"	"688.90485"	"1376.80242"	"1376.80372"	"-0.95"	"-0.00065"	"14/62"	"14"	"62"	"3226266.31994629"	"HCD"	"MS2"	"10.40201"	"247.7"	"100.000"	"67.1566"	"22285"	"22285"	"22268"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"326.4"	""	"276.1"	""	"337.5"	""	"396.9"	""	"484.8"	"531.7"	""	"853"	"45"	"36.000"	"29.000"	"0.00125002596909926"	""	"0.0001301"	"0.004659"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVELEDVK"	"[K].sVELEDVk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"459.60568"	"1376.80249"	"1376.80372"	"-0.89"	"-0.00041"	"6/66"	"6"	"66"	"505867.275085449"	"HCD"	"MS2"	"16.06723"	"25.4"	"100.000"	"64.2498"	"21105"	"21105"	"21081"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.7"	""	"29.8"	""	"35.9"	""	"35.3"	"0.5"	"40.6"	"67.2"	""	"853"	"40"	"36.000"	"29.000"	"0.00454903245704705"	""	"0.0008629"	"0.009971"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVELEDVK"	"[K].sVELEDVk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"0"	"2"	"2"	"0.5476"	"0.0000"	"1"	"1"	"1"	"688.90503"	"1376.80278"	"1376.80372"	"-0.68"	"-0.00047"	"7/66"	"7"	"66"	"1295887.3651123"	"HCD"	"MS2"	"8.562079"	"100.8"	"100.000"	"64.4728"	"21181"	"21181"	"21161"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"145.7"	""	"127.8"	""	"137.8"	""	"162.7"	""	"189.4"	"192.8"	""	"864"	"42"	"36.000"	"29.000"	"0.00252048285046258"	""	"0"	"0.002151"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVELEDVK"	"[K].sVELEDVk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"0"	"2"	"2"	"0.3158"	"0.0000"	"1"	"1"	"1"	"688.90515"	"1376.80303"	"1376.80372"	"-0.50"	"-0.00035"	"7/66"	"7"	"66"	"1206265.97717285"	"HCD"	"MS2"	"24.54902"	"88.3"	"100.000"	"64.1454"	"21048"	"21048"	"21030"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"142.6"	""	"112.2"	""	"129.5"	""	"151.7"	""	"157.8"	"146.7"	""	"864"	"38"	"36.000"	"29.000"	"0.00695798914397013"	""	"0"	"0.003519"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDSDLK"	"[K].vLEDSDLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.4222"	"0.0000"	"1"	"1"	"1"	"688.90521"	"1376.80315"	"1376.80372"	"-0.41"	"-0.00028"	"14/62"	"14"	"62"	"3592351.27734375"	"HCD"	"MS2"	"8.451559"	"295.3"	"100.000"	"67.2480"	"22307"	"22307"	"22290"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"403.0"	""	"330.1"	""	"385.2"	""	"465.4"	""	"621.6"	"601.0"	""	"864"	"45"	"36.000"	"29.000"	"0.00127199014580106"	""	"0.0001301"	"0.004721"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDSDLK"	"[K].vLEDSDLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.4318"	"0.0000"	"1"	"1"	"1"	"688.90521"	"1376.80315"	"1376.80372"	"-0.41"	"-0.00028"	"14/62"	"14"	"62"	"4685016.99145508"	"HCD"	"MS2"	"6.321986"	"348.6"	"100.000"	"66.9365"	"22180"	"22180"	"22163"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"525.4"	""	"396.4"	""	"459.3"	""	"614.1"	""	"650.1"	"659.1"	""	"864"	"44"	"36.000"	"29.000"	"0.00185132960811694"	""	"0"	"0.003208"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVELEDVK"	"[K].sVELEDVk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"0"	"3"	"3"	"0.5938"	"0.0000"	"1"	"1"	"1"	"459.60590"	"1376.80313"	"1376.80372"	"-0.42"	"-0.00019"	"9/66"	"9"	"66"	"517048.715515137"	"HCD"	"MS2"	"18.28739"	"26.1"	"100.000"	"64.4540"	"21174"	"21174"	"21145"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.3"	""	"29.1"	""	"32.6"	""	"33.6"	""	"36.2"	"77.3"	""	"864"	"32"	"36.000"	"29.000"	"0.0274462962559953"	"28"	"0.003922"	"0.04055"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDSDLK"	"[K].vLEDSDLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"688.90533"	"1376.80339"	"1376.80372"	"-0.24"	"-0.00016"	"9/62"	"9"	"62"	"260543.825195313"	"HCD"	"MS2"	"14.52993"	"22.4"	"100.000"	"67.5346"	"22439"	"22439"	"22408"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.7"	""	"27.2"	""	"27.6"	""	"37.6"	"1.6"	"43.3"	"44.3"	""	"854"	"19"	"36.000"	"29.000"	"0.49708181455828"	"24"	"0.008901"	"0.1154"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVELEDVK"	"[K].sVELEDVk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"0"	"2"	"2"	"0.3158"	"0.0000"	"1"	"1"	"1"	"688.90540"	"1376.80351"	"1376.80372"	"-0.15"	"-0.00010"	"7/66"	"7"	"66"	"1320032.70568848"	"HCD"	"MS2"	"28.25437"	"94.3"	"100.000"	"64.0585"	"21027"	"21027"	"21002"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"133.1"	""	"126.9"	""	"132.4"	""	"160.4"	"0.3"	"173.5"	"167.0"	""	"861"	"38"	"36.000"	"29.000"	"0.00683869375271344"	""	"0"	"0.003607"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDSDLK"	"[K].vLEDSDLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"688.90558"	"1376.80388"	"1376.80372"	"0.12"	"0.00008"	"6/62"	"6"	"62"	"334607.002319336"	"HCD"	"MS2"	"9.127261"	"29.4"	"100.000"	"67.5754"	"22440"	"22440"	"22414"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.1"	""	"36.8"	""	"35.3"	""	"51.1"	"0.0"	"49.3"	"59.5"	""	"857"	"32"	"36.000"	"29.000"	"0.0295767755945544"	"28"	"0.001211"	"0.01524"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVELEDVK"	"[K].sVELEDVk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"0"	"2"	"2"	"0.6304"	"0.0000"	"1"	"1"	"1"	"688.90564"	"1376.80400"	"1376.80372"	"0.21"	"0.00014"	"14/66"	"14"	"66"	"1672489.11047363"	"HCD"	"MS2"	"5.3321"	"124.0"	"100.000"	"64.3355"	"21139"	"21139"	"21126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"188.1"	""	"150.6"	""	"170.9"	""	"188.5"	""	"232.5"	"245.4"	""	"857"	"46"	"36.000"	"29.000"	"0.00119385292075786"	""	"0"	"0.002684"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTPQQIDYAR"	"[R].gTPQQIDYAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"689.36908"	"1377.73088"	"1377.73239"	"-1.10"	"-0.00076"	"9/94"	"9"	"94"	"1272104.38452148"	"HCD"	"MS2"	"27.36069"	"77.5"	"100.000"	"39.3792"	"11017"	"11017"	"10991"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"112.5"	""	"82.9"	""	"92.8"	""	"120.3"	"1.0"	"180.1"	"147.0"	""	"896"	"36"	"36.000"	"29.000"	"0.0112532512131629"	"17"	"0"	"0.001351"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTPQQIDYAR"	"[R].gTPQQIDYAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"689.37030"	"1377.73332"	"1377.73239"	"0.67"	"0.00046"	"8/94"	"8"	"94"	"1329924.55145264"	"HCD"	"MS2"	"36.90934"	"79.6"	"100.000"	"39.6007"	"11098"	"11098"	"11070"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"121.7"	""	"83.0"	""	"95.3"	""	"121.4"	""	"185.1"	"154.6"	""	"876"	"31"	"36.000"	"29.000"	"0.0377115263456855"	"18"	"0"	"0.003742"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITESEEVVSR"	"[R].iTESEEVVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"689.37231"	"1377.73735"	"1377.74229"	"-3.58"	"-0.00247"	"9/86"	"9"	"86"	"1546507.42175293"	"HCD"	"MS2"	"26.4105"	"87.1"	"100.000"	"46.5540"	"13923"	"13923"	"13898"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"79.4"	""	"77.6"	""	"67.7"	""	"152.4"	"1.6"	"211.9"	"240.1"	""	"957"	"45"	"36.000"	"29.000"	"0.00139920691279804"	"23"	"0"	"0.0001331"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITESEEVVSR"	"[R].iTESEEVVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"689.37335"	"1377.73943"	"1377.74229"	"-2.08"	"-0.00143"	"9/86"	"9"	"86"	"1241885.73913574"	"HCD"	"MS2"	"0"	"82.6"	"100.000"	"46.5995"	"13951"	"13951"	"13942"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"73.2"	""	"85.0"	""	"83.7"	""	"162.0"	""	"197.0"	"192.7"	""	"958"	"35"	"36.000"	"29.000"	"0.0145658392729894"	"27"	"0"	"0.0004046"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITESEEVVSR"	"[R].iTESEEVVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"689.37384"	"1377.74040"	"1377.74229"	"-1.37"	"-0.00094"	"9/86"	"9"	"86"	"1590701.56866455"	"HCD"	"MS2"	"0"	"99.8"	"100.000"	"46.3221"	"13840"	"13840"	"13817"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"96.4"	""	"100.0"	""	"89.3"	""	"175.4"	""	"234.7"	"257.7"	""	"947"	"41"	"36.000"	"29.000"	"0.00344603737448186"	"21"	"0"	"8.662E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TELATQEK"	"[R].tELATQEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"689.40265"	"1377.79802"	"1377.79897"	"-0.69"	"-0.00047"	"7/72"	"7"	"72"	"868772.240234375"	"HCD"	"MS2"	"9.485291"	"76.5"	"100.000"	"40.2763"	"11374"	"11374"	"11352"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"117.0"	""	"96.1"	""	"117.5"	""	"99.5"	""	"142.1"	"153.1"	""	"796"	"43"	"35.000"	"29.000"	"0.00182760809109074"	"25"	"0"	"0.002379"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TELATQEK"	"[R].tELATQEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"689.40283"	"1377.79839"	"1377.79897"	"-0.42"	"-0.00029"	"7/72"	"7"	"72"	"1026921.81182861"	"HCD"	"MS2"	"8.441503"	"86.4"	"100.000"	"40.0364"	"11285"	"11285"	"11262"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"135.3"	""	"108.0"	""	"119.4"	""	"114.9"	""	"156.8"	"191.2"	""	"796"	"43"	"35.000"	"29.000"	"0.0018192109946672"	"25"	"0"	"0.002259"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPSAEFSVDR"	"[R].aAPSAEFSVDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"0"	"2"	"2"	"0.8361"	"0.0000"	"1"	"1"	"1"	"689.86115"	"1378.71501"	"1378.71641"	"-1.01"	"-0.00070"	"17/92"	"17"	"92"	"1542744.7064209"	"HCD"	"MS2"	"0"	"80.8"	"100.000"	"51.3497"	"15876"	"15876"	"15854"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.6"	""	"85.3"	""	"111.7"	""	"143.2"	"1.6"	"146.9"	"151.1"	""	"792"	"61"	"35.000"	"28.000"	"3.43316902800254E-05"	"26"	"0"	"4.425E-05"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPSAEFSVDR"	"[R].aAPSAEFSVDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"689.86127"	"1378.71526"	"1378.71641"	"-0.84"	"-0.00058"	"16/92"	"16"	"92"	"1131187.48956299"	"HCD"	"MS2"	"0"	"60.9"	"100.000"	"50.9737"	"15734"	"15734"	"15712"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"84.0"	""	"69.5"	""	"92.9"	""	"108.6"	"0.5"	"102.0"	"118.9"	""	"792"	"50"	"35.000"	"28.000"	"0.00040991629800502"	"24"	"0"	"2.924E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPSAEFSVDR"	"[R].aAPSAEFSVDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"689.86133"	"1378.71538"	"1378.71641"	"-0.75"	"-0.00052"	"8/92"	"8"	"92"	"1767632.90063477"	"HCD"	"MS2"	"7.143089"	"89.3"	"100.000"	"51.6424"	"15996"	"15996"	"15979"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"123.8"	""	"105.1"	""	"106.3"	""	"170.1"	""	"169.8"	"172.4"	""	"795"	"58"	"35.000"	"29.000"	"5.85244219717006E-05"	"26"	"0"	"6.654E-06"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPSAEFSVDR"	"[R].aAPSAEFSVDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"689.86133"	"1378.71538"	"1378.71641"	"-0.75"	"-0.00052"	"10/92"	"10"	"92"	"1858926.90710449"	"HCD"	"MS2"	"3.416751"	"96.7"	"100.000"	"51.2914"	"15863"	"15863"	"15847"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"128.7"	""	"117.4"	""	"112.5"	""	"175.0"	""	"199.0"	"192.2"	""	"795"	"51"	"35.000"	"29.000"	"0.000291297751922714"	"25"	"0"	"4.578E-05"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQQELESFR"	"[K].lQQELESFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88902"	"Tyrosine-protein phosphatase non-receptor type 23 (Fragment) OS=Rattus norvegicus OX=10116 GN=Ptpn23 PE=1 SV=2"	"O88902"	"Tyrosine-protein phosphatase non-receptor type 23 (Fragment) OS=Rattus norvegicus OX=10116 GN=Ptpn23 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"689.87903"	"1378.75078"	"1378.75280"	"-1.46"	"-0.00101"	"5/84"	"5"	"84"	"194976.550964355"	"HCD"	"MS2"	"23.90898"	"12.5"	"100.000"	"85.0421"	"29490"	"29490"	"29467"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.3"	""	"21.3"	""	"16.4"	""	"23.0"	""	"20.7"	"22.2"	""	"918"	"26"	"36.000"	"29.000"	"0.108595714114596"	"20"	"0.0008629"	"0.009562"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQQELESFR"	"[K].lQQELESFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88902"	"Tyrosine-protein phosphatase non-receptor type 23 (Fragment) OS=Rattus norvegicus OX=10116 GN=Ptpn23 PE=1 SV=2"	"O88902"	"Tyrosine-protein phosphatase non-receptor type 23 (Fragment) OS=Rattus norvegicus OX=10116 GN=Ptpn23 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"689.88000"	"1378.75273"	"1378.75280"	"-0.05"	"-0.00003"	"7/84"	"7"	"84"	"199156.410888672"	"HCD"	"MS2"	"16.0841"	"13.4"	"100.000"	"85.0375"	"29489"	"29489"	"29473"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.5"	""	"19.2"	""	"16.6"	""	"27.1"	""	"23.8"	"22.4"	""	"905"	"25"	"36.000"	"29.000"	"0.1491483947603"	"19"	"0.0003538"	"0.006833"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].LVQEVTDFAk.[T]"	"K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"689.89203"	"1378.77678"	"1378.77795"	"-0.85"	"-0.00058"	"8/92"	"8"	"92"	"2454603.99389648"	"HCD"	"MS2"	"0"	"93.7"	"100.000"	"66.5849"	"22051"	"22051"	"22029"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"143.9"	""	"162.1"	""	"132.4"	""	"130.3"	""	"162.1"	"156.0"	""	"873"	"50"	"36.000"	"29.000"	"0.000477511953877769"	"28"	"0.0003538"	"0.006739"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].LVQEVTDFAk.[T]"	"K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7736"	"0.0000"	"1"	"1"	"1"	"689.89246"	"1378.77764"	"1378.77795"	"-0.23"	"-0.00016"	"7/92"	"7"	"92"	"1936823.30877686"	"HCD"	"MS2"	"0"	"81.4"	"100.000"	"66.6349"	"22056"	"22056"	"22036"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.1"	""	"139.5"	""	"114.9"	""	"116.1"	""	"139.2"	"140.7"	""	"869"	"53"	"36.000"	"29.000"	"0.000228554502246762"	"28"	"0"	"0.00322"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAFLETEQLK"	"[R].AAFLETEQLk.[K]"	"K10(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"689.89441"	"1378.78154"	"1378.77795"	"2.61"	"0.00180"	"6/80"	"6"	"80"	"170863.800720215"	"HCD"	"MS2"	"34.21925"	"13.0"	"100.000"	"69.0857"	"23056"	"23056"	"23028"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.1"	""	"14.8"	""	"21.1"	""	"20.1"	""	"26.3"	"28.2"	""	"875"	"20"	"36.000"	"29.000"	"0.423621562114296"	"15"	"0.00918"	"0.1202"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAESSPFVER"	"[K].eAESSPFVER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"690.35260"	"1379.69792"	"1379.70043"	"-1.81"	"-0.00125"	"7/88"	"7"	"88"	"817534.936096191"	"HCD"	"MS2"	"27.64379"	"65.9"	"100.000"	"44.0274"	"12909"	"12909"	"12881"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"116.3"	""	"95.0"	""	"94.2"	""	"87.1"	"0.9"	"113.7"	"115.9"	""	"690"	"26"	"35.000"	"28.000"	"0.0963427625226881"	"18"	"0.0008629"	"0.01114"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAESSPFVER"	"[K].eAESSPFVER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"690.35327"	"1379.69927"	"1379.70043"	"-0.84"	"-0.00058"	"8/88"	"8"	"88"	"1617313.05322266"	"HCD"	"MS2"	"20.68111"	"94.9"	"100.000"	"43.6877"	"12771"	"12771"	"12754"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"175.8"	""	"116.3"	""	"114.4"	""	"160.1"	"0.4"	"164.1"	"167.0"	""	"713"	"30"	"35.000"	"28.000"	"0.0380241517218587"	"21"	"0.0001301"	"0.004334"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAESSPFVER"	"[K].eAESSPFVER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"690.35352"	"1379.69975"	"1379.70043"	"-0.49"	"-0.00034"	"7/88"	"7"	"88"	"1124098.3840332"	"HCD"	"MS2"	"29.41052"	"76.6"	"100.000"	"43.7667"	"12793"	"12793"	"12783"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"135.3"	""	"99.2"	""	"102.1"	""	"115.1"	"0.6"	"135.0"	"137.8"	""	"722"	"19"	"35.000"	"28.000"	"0.40598239560206"	"17"	"0.003922"	"0.04027"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAESSPFVER"	"[K].eAESSPFVER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"690.35358"	"1379.69988"	"1379.70043"	"-0.40"	"-0.00027"	"8/88"	"8"	"88"	"1499037.2409668"	"HCD"	"MS2"	"20.70356"	"84.9"	"100.000"	"44.0602"	"12911"	"12911"	"12891"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"159.6"	""	"102.7"	""	"115.8"	""	"131.9"	"1.1"	"143.7"	"148.1"	""	"713"	"42"	"35.000"	"28.000"	"0.00231238175559947"	"19"	"0"	"0.0005725"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGQEMNGK"	"[K].aSGQEMNGk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"690.37073"	"1379.73418"	"1379.73532"	"-0.83"	"-0.00057"	"8/80"	"8"	"80"	"685612.097229004"	"HCD"	"MS2"	"0"	"69.4"	"100.000"	"28.1135"	"6452"	"6452"	"6430"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"118.8"	""	"91.6"	""	"83.3"	""	"93.0"	""	"128.2"	"143.9"	""	"875"	"41"	"36.000"	"29.000"	"0.00343540590141907"	"21"	"0"	"0.0003903"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SITADPLDYR"	"[R].sITADPLDYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P49793"	"Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicus OX=10116 GN=Nup98 PE=1 SV=2"	"P49793"	"Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicus OX=10116 GN=Nup98 PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"690.37146"	"1379.73564"	"1379.73681"	"-0.85"	"-0.00058"	"7/86"	"7"	"86"	"581462.506652832"	"HCD"	"MS2"	"14.46496"	"23.1"	"100.000"	"74.5617"	"25298"	"25298"	"25286"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.7"	""	"20.2"	""	"28.7"	""	"42.1"	""	"49.7"	"53.9"	""	"885"	"44"	"36.000"	"29.000"	"0.00182353152200568"	"20"	"0.0002479"	"0.005331"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SITADPLDYR"	"[R].sITADPLDYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P49793"	"Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicus OX=10116 GN=Nup98 PE=1 SV=2"	"P49793"	"Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicus OX=10116 GN=Nup98 PE=1 SV=2"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"690.37170"	"1379.73613"	"1379.73681"	"-0.49"	"-0.00034"	"6/86"	"6"	"86"	"426330.625610352"	"HCD"	"MS2"	"0"	"20.0"	"100.000"	"74.6549"	"25323"	"25323"	"25301"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.5"	""	"21.3"	""	"24.8"	""	"32.0"	""	"44.0"	"42.6"	""	"886"	"29"	"36.000"	"29.000"	"0.0514521735931272"	"19"	"0.0004639"	"0.007692"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPPNSESK"	"[R].yPPNSESk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"690.38220"	"1379.75713"	"1379.75710"	"0.02"	"0.00001"	"7/68"	"7"	"68"	"258891.862426758"	"HCD"	"MS2"	"0"	"22.1"	"100.000"	"35.2365"	"9331"	"9331"	"9301"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.0"	""	"27.7"	""	"23.2"	""	"36.4"	""	"49.3"	"43.1"	""	"944"	"36"	"36.000"	"29.000"	"0.0110139220539663"	"17"	"0.005427"	"0.06176"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGSTIDSVK"	"[K].dGSTIDSVk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q498D9"	"PDZ domain-containing protein GIPC2 OS=Rattus norvegicus OX=10116 GN=Gipc2 PE=2 SV=1"	"Q498D9"	"PDZ domain-containing protein GIPC2 OS=Rattus norvegicus OX=10116 GN=Gipc2 PE=2 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"690.39288"	"1379.77849"	"1379.77823"	"0.19"	"0.00013"	"14/76"	"14"	"76"	"638880.118774414"	"HCD"	"MS2"	"38.06439"	"55.5"	"100.000"	"45.6823"	"13579"	"13579"	"13550"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.0"	""	"54.9"	""	"61.9"	""	"96.6"	""	"122.0"	"130.1"	""	"886"	"26"	"36.000"	"29.000"	"0.106513272040307"	"20"	"0"	"0.001621"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GESPVDYDGGR"	"[K].gESPVDYDGGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"690.83221"	"1380.65715"	"1380.65929"	"-1.55"	"-0.00107"	"9/92"	"9"	"92"	"1344305.12219238"	"HCD"	"MS2"	"0"	"88.2"	"100.000"	"38.0062"	"10457"	"10457"	"10430"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.4"	""	"98.9"	""	"122.0"	""	"154.1"	""	"172.0"	"191.9"	""	"390"	"37"	"32.000"	"25.000"	"0.00382855253983029"	"18"	"0"	"8.688E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSSLGYEAPGR"	"[R].dSSLGYEAPGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DEH0"	"LIM domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Limd1 PE=1 SV=1"	"B5DEH0"	"LIM domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Limd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"690.85126"	"1380.69524"	"1380.69567"	"-0.32"	"-0.00022"	"7/92"	"7"	"92"	"496800.796936035"	"HCD"	"MS2"	"11.49072"	"34.1"	"100.000"	"42.7948"	"12398"	"12398"	"12370"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.9"	""	"34.6"	""	"47.7"	""	"55.5"	""	"68.1"	"75.9"	""	"617"	"41"	"34.000"	"27.000"	"0.00222461657327924"	"22"	"0"	"9.83E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSSLGYEAPGR"	"[R].dSSLGYEAPGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DEH0"	"LIM domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Limd1 PE=1 SV=1"	"B5DEH0"	"LIM domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Limd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"690.85138"	"1380.69548"	"1380.69567"	"-0.14"	"-0.00010"	"8/92"	"8"	"92"	"497146.487426758"	"HCD"	"MS2"	"0"	"31.5"	"100.000"	"42.7117"	"12375"	"12375"	"12346"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.6"	""	"33.9"	""	"44.2"	""	"52.6"	""	"61.3"	"60.9"	""	"625"	"44"	"34.000"	"27.000"	"0.00138627701228573"	"22"	"0"	"0.000153"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGQEMNGK"	"[K].aSGQEMnGk.[N]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"690.86224"	"1380.71721"	"1380.71934"	"-1.54"	"-0.00106"	"12/80"	"12"	"80"	"633158.700134277"	"HCD"	"MS2"	"15.16228"	"53.5"	"100.000"	"29.5966"	"7053"	"7053"	"7031"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"85.1"	""	"59.0"	""	"65.6"	""	"69.2"	""	"103.1"	"130.3"	""	"780"	"24"	"35.000"	"28.000"	"0.163329490395988"	"24"	"0.0003538"	"0.006616"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGQEMNGK"	"[K].aSGQEMnGk.[N]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.6136"	"0.0000"	"1"	"1"	"1"	"690.86267"	"1380.71807"	"1380.71934"	"-0.92"	"-0.00064"	"13/80"	"13"	"80"	"480384.61541748"	"HCD"	"MS2"	"0"	"42.7"	"100.000"	"29.6660"	"7069"	"7069"	"7052"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.2"	""	"42.1"	""	"47.4"	""	"49.9"	""	"95.6"	"97.5"	""	"781"	"44"	"35.000"	"28.000"	"0.00158351083092594"	""	"0"	"0.0003638"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDIDTAMK"	"[K].eDIDTAMk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"460.91815"	"1380.73990"	"1380.74449"	"-3.32"	"-0.00153"	"6/64"	"6"	"64"	"2005658.35272217"	"HCD"	"MS2"	"48.06049"	"105.1"	"100.000"	"54.9548"	"17343"	"17343"	"17323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"146.4"	""	"108.9"	""	"125.4"	""	"169.2"	"0.3"	"221.4"	"226.3"	""	"853"	"24"	"36.000"	"29.000"	"0.16707791058647"	"24"	"0.003111"	"0.03155"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDmAALEk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"690.87482"	"1380.74236"	"1380.74449"	"-1.54"	"-0.00107"	"6/68"	"6"	"68"	"525734.26385498"	"HCD"	"MS2"	"18.03027"	"43.6"	"100.000"	"50.4902"	"15537"	"15537"	"15515"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.3"	""	"43.4"	""	"52.0"	""	"50.2"	""	"88.8"	"122.1"	""	"925"	"19"	"36.000"	"29.000"	"0.650296979910085"	"26"	"0.008478"	"0.1034"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDIDTAMK"	"[K].eDIDTAMk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"690.87506"	"1380.74285"	"1380.74449"	"-1.19"	"-0.00082"	"7/64"	"7"	"64"	"790699.45904541"	"HCD"	"MS2"	"0"	"63.0"	"100.000"	"55.0714"	"17403"	"17403"	"17384"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.2"	""	"61.1"	""	"79.1"	""	"86.7"	""	"146.8"	"141.1"	""	"922"	"24"	"36.000"	"29.000"	"0.169317140529617"	"26"	"0.0006732"	"0.009223"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDIDTAMK"	"[K].eDIDTAMk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"690.87506"	"1380.74285"	"1380.74449"	"-1.19"	"-0.00082"	"7/64"	"7"	"64"	"1225753.609375"	"HCD"	"MS2"	"0"	"106.6"	"100.000"	"55.2141"	"17448"	"17448"	"17431"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"157.5"	""	"98.2"	"3.2"	"122.9"	""	"152.7"	""	"230.4"	"249.8"	""	"922"	"36"	"36.000"	"29.000"	"0.0108818046549624"	"23"	"0.0001301"	"0.004557"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDIDTAMK"	"[K].eDIDTAMk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"690.87512"	"1380.74297"	"1380.74449"	"-1.10"	"-0.00076"	"7/64"	"7"	"64"	"4021568.17321777"	"HCD"	"MS2"	"4.670401"	"312.9"	"100.000"	"54.7123"	"17257"	"17257"	"17239"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"485.9"	""	"338.5"	""	"347.4"	""	"510.7"	""	"598.2"	"692.7"	""	"922"	"41"	"36.000"	"29.000"	"0.00348899964604669"	"24"	"0.0003538"	"0.006294"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDmAALEk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"1"	"690.87537"	"1380.74346"	"1380.74449"	"-0.75"	"-0.00052"	"7/68"	"7"	"68"	"386920.953491211"	"HCD"	"MS2"	"28.4842"	"32.1"	"100.000"	"47.3653"	"14264"	"14264"	"14238"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.7"	""	"34.3"	""	"43.8"	""	"48.1"	""	"72.6"	"68.0"	""	"926"	"20"	"36.000"	"29.000"	"0.484820517747566"	"25"	"0.00912"	"0.1192"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDmAALEk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"690.87549"	"1380.74370"	"1380.74449"	"-0.57"	"-0.00039"	"6/68"	"6"	"68"	"1779768.87695313"	"HCD"	"MS2"	"29.55693"	"112.3"	"100.000"	"43.0225"	"12491"	"12491"	"12460"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"110.0"	""	"79.1"	""	"104.4"	""	"316.9"	""	"254.0"	"204.4"	""	"924"	"21"	"36.000"	"29.000"	"0.385160707294271"	"25"	"0.002937"	"0.02777"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDIDTAMK"	"[K].eDIDTAMk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"690.87573"	"1380.74419"	"1380.74449"	"-0.22"	"-0.00015"	"7/64"	"7"	"64"	"3765079.41705322"	"HCD"	"MS2"	"5.376713"	"291.4"	"100.000"	"54.9135"	"17326"	"17326"	"17309"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"446.7"	""	"320.7"	""	"337.0"	""	"431.8"	""	"583.7"	"650.3"	""	"923"	"31"	"36.000"	"29.000"	"0.0405668891517453"	"23"	"0.000936"	"0.0113"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDmAALEk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.3158"	"0.0000"	"1"	"1"	"1"	"690.87592"	"1380.74455"	"1380.74449"	"0.05"	"0.00003"	"6/68"	"6"	"68"	"2712417.99810791"	"HCD"	"MS2"	"23.19185"	"163.9"	"100.000"	"42.9256"	"12462"	"12462"	"12435"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"150.2"	""	"117.1"	""	"125.7"	""	"472.7"	"0.4"	"376.5"	"317.4"	""	"922"	"19"	"36.000"	"29.000"	"0.591154398604426"	"26"	"0.001546"	"0.01865"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDmAALEk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"690.87592"	"1380.74455"	"1380.74449"	"0.05"	"0.00003"	"6/68"	"6"	"68"	"8420225.64141846"	"HCD"	"MS2"	"0"	"491.5"	"100.000"	"43.2040"	"12576"	"12576"	"12562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"510.8"	""	"345.8"	""	"427.3"	""	"1277.1"	"2.5"	"1137.3"	"976.3"	""	"922"	"20"	"36.000"	"29.000"	"0.461"	"26"	"0.002973"	"0.02929"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETTEESVK"	"[K].eTTEESVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"690.88434"	"1380.76140"	"1380.76225"	"-0.61"	"-0.00042"	"7/66"	"7"	"66"	"3763294.01342773"	"HCD"	"MS2"	"18.77727"	"259.3"	"100.000"	"32.2305"	"8120"	"8120"	"8103"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"333.6"	""	"235.8"	""	"266.6"	""	"494.4"	""	"585.2"	"554.8"	""	"939"	"29"	"36.000"	"29.000"	"0.0580277320002198"	"24"	"0.002379"	"0.02464"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETTEESVK"	"[K].eTTEESVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.5366"	"0.0000"	"1"	"1"	"1"	"690.88470"	"1380.76213"	"1380.76225"	"-0.08"	"-0.00006"	"7/66"	"7"	"66"	"1712276.17327881"	"HCD"	"MS2"	"0"	"138.8"	"100.000"	"31.9274"	"7997"	"7997"	"7976"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"199.4"	""	"129.6"	""	"147.7"	""	"267.4"	""	"294.3"	"281.0"	""	"932"	"41"	"36.000"	"29.000"	"0.00359241016584024"	""	"0.0001301"	"0.003963"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETTEESVK"	"[K].eTTEESVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.4878"	"0.0000"	"1"	"1"	"1"	"690.88470"	"1380.76213"	"1380.76225"	"-0.08"	"-0.00006"	"7/66"	"7"	"66"	"2924766.57092285"	"HCD"	"MS2"	"0"	"219.8"	"100.000"	"31.9945"	"8016"	"8016"	"7993"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"307.7"	""	"207.8"	""	"228.9"	""	"410.5"	""	"477.3"	"456.6"	""	"932"	"41"	"36.000"	"29.000"	"0.00343863371240161"	""	"0.0003538"	"0.006136"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETTEESVK"	"[K].eTTEESVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"690.88470"	"1380.76213"	"1380.76225"	"-0.08"	"-0.00006"	"7/66"	"7"	"66"	"3345871.20941162"	"HCD"	"MS2"	"25.42464"	"221.7"	"100.000"	"32.2791"	"8132"	"8132"	"8114"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"264.6"	""	"217.7"	""	"229.2"	""	"427.8"	""	"488.4"	"498.5"	""	"932"	"20"	"36.000"	"29.000"	"0.492476959293564"	"20"	"0.003717"	"0.03807"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YENNVMNIR"	"[K].yENNVMNIR.[Q]"	"N-Term(TMT6plex)"	"2"	"2"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1; Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"691.35864"	"1381.71001"	"1381.70955"	"0.33"	"0.00023"	"6/76"	"6"	"76"	"1124640.87677002"	"HCD"	"MS2"	"28.10863"	"79.5"	"100.000"	"56.8679"	"18136"	"18136"	"18115"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"126.2"	""	"110.7"	""	"119.3"	""	"84.1"	"2.0"	"169.3"	"142.0"	""	"682"	"24"	"35.000"	"28.000"	"0.126402126127858"	"16"	"0"	"0.00213"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YENNVMNIR"	"[K].yENNVMNIR.[Q]"	"N-Term(TMT6plex)"	"2"	"2"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1; Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"691.35870"	"1381.71013"	"1381.70955"	"0.42"	"0.00029"	"8/76"	"8"	"76"	"1033204.81530762"	"HCD"	"MS2"	"23.57174"	"75.6"	"100.000"	"57.0150"	"18182"	"18182"	"18163"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"121.0"	""	"100.6"	""	"112.9"	""	"84.2"	""	"163.2"	"140.0"	""	"682"	"28"	"35.000"	"28.000"	"0.0591227163234161"	"14"	"0"	"0.000918"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYEELIK"	"[R].eYEELIk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z2J4"	"Nexilin OS=Rattus norvegicus OX=10116 GN=Nexn PE=1 SV=1"	"Q9Z2J4"	"Nexilin OS=Rattus norvegicus OX=10116 GN=Nexn PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"691.40186"	"1381.79643"	"1381.79790"	"-1.06"	"-0.00073"	"8/54"	"8"	"54"	"328166.69934082"	"HCD"	"MS2"	"49.94525"	"22.7"	"100.000"	"74.9362"	"25432"	"25432"	"25409"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.9"	""	"27.7"	""	"22.6"	""	"37.1"	""	"47.3"	"60.6"	""	"678"	"27"	"35.000"	"28.000"	"0.0604226402164903"	""	"0.00447"	"0.0468"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYEELIK"	"[R].eYEELIk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z2J4"	"Nexilin OS=Rattus norvegicus OX=10116 GN=Nexn PE=1 SV=1"	"Q9Z2J4"	"Nexilin OS=Rattus norvegicus OX=10116 GN=Nexn PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"691.40204"	"1381.79680"	"1381.79790"	"-0.80"	"-0.00055"	"6/54"	"6"	"54"	"356460.506835938"	"HCD"	"MS2"	"28.68371"	"27.9"	"100.000"	"74.8501"	"25414"	"25414"	"25398"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.4"	""	"26.2"	""	"22.6"	"1.9"	"50.1"	"0.1"	"67.8"	"70.5"	""	"691"	"30"	"35.000"	"28.000"	"0.0376225347246702"	"26"	"0.002379"	"0.02464"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPFNPEHTR"	"[K].rPFNPEHTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"691.87775"	"1382.74822"	"1382.74905"	"-0.60"	"-0.00042"	"6/84"	"6"	"84"	"1102918.52923584"	"HCD"	"MS2"	"0"	"29.8"	"100.000"	"21.0506"	"3596"	"3596"	"3570"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.0"	""	"47.5"	""	"35.2"	""	"48.4"	""	"54.6"	"50.9"	""	"779"	"33"	"35.000"	"28.000"	"0.021257268689505"	"24"	"0.005921"	"0.06891"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPFNPEHTR"	"[K].rPFNPEHTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"691.87836"	"1382.74944"	"1382.74905"	"0.28"	"0.00019"	"11/84"	"11"	"84"	"1189238.09686279"	"HCD"	"MS2"	"0"	"31.3"	"100.000"	"21.0946"	"3596"	"3596"	"3573"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.8"	""	"49.8"	""	"40.8"	""	"54.2"	""	"47.3"	"60.3"	""	"775"	"32"	"35.000"	"28.000"	"0.0224012218369716"	"25"	"0.0008629"	"0.009529"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEPSETAK"	"[R].yEPSETAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"691.88080"	"1382.75432"	"1382.75677"	"-1.77"	"-0.00122"	"7/64"	"7"	"64"	"317904.905578613"	"HCD"	"MS2"	"0"	"29.4"	"100.000"	"39.3493"	"11005"	"11005"	"10975"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.2"	""	"39.7"	""	"42.0"	""	"42.1"	""	"62.8"	"53.1"	""	"758"	"29"	"35.000"	"28.000"	"0.0534120454601891"	"24"	"0.00599"	"0.06921"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEPSETAK"	"[R].yEPSETAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"691.88147"	"1382.75566"	"1382.75677"	"-0.80"	"-0.00055"	"7/64"	"7"	"64"	"2520011.09088135"	"HCD"	"MS2"	"0"	"186.4"	"100.000"	"39.0064"	"10865"	"10865"	"10844"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"284.5"	""	"281.8"	""	"240.2"	""	"248.5"	""	"349.0"	"365.6"	""	"747"	"38"	"35.000"	"28.000"	"0.00593322210601271"	"27"	"0"	"0.003773"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEPSETAK"	"[R].yEPSETAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"691.88165"	"1382.75603"	"1382.75677"	"-0.53"	"-0.00037"	"7/64"	"7"	"64"	"1384303.21911621"	"HCD"	"MS2"	"0"	"106.6"	"100.000"	"39.1751"	"10925"	"10925"	"10899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"170.4"	""	"149.4"	""	"139.2"	""	"161.3"	"0.6"	"184.8"	"203.7"	""	"743"	"30"	"35.000"	"28.000"	"0.0406404790070083"	"26"	"0.0003538"	"0.006221"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEPSETAK"	"[R].yEPSETAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"691.88177"	"1382.75627"	"1382.75677"	"-0.36"	"-0.00025"	"6/64"	"6"	"64"	"681394.14642334"	"HCD"	"MS2"	"0"	"57.6"	"100.000"	"39.4811"	"11049"	"11049"	"11025"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"85.7"	""	"77.5"	""	"71.1"	""	"82.8"	""	"106.6"	"122.3"	""	"741"	"28"	"35.000"	"28.000"	"0.0603654180093018"	"25"	"0.0001301"	"0.004102"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDQVIGSHR"	"[K].eIDQVIGSHR.[L]"	"N-Term(TMT6plex)"	"2"	"3"	"P00176; P33272"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1;Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1"	"Q64583; P00176; P33272"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"461.59085"	"1382.75800"	"1382.75894"	"-0.68"	"-0.00031"	"12/98"	"12"	"98"	"8575829.77398682"	"HCD"	"MS2"	"11.73026"	"78.4"	"83.003"	"44.8263"	"13218"	"13218"	"13200"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"123.0"	""	"107.3"	""	"119.6"	""	"104.9"	""	"143.2"	"150.0"	""	"753"	"35"	"35.000"	"28.000"	"0.0124958263268558"	"24"	"0"	"0.0005148"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDQVIGSHR"	"[K].eIDQVIGSHR.[L]"	"N-Term(TMT6plex)"	"2"	"3"	"P00176; P33272"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1;Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1"	"Q64583; P00176; P33272"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1"	"0"	"3"	"3"	"0.6765"	"0.0000"	"1"	"1"	"1"	"461.59085"	"1382.75800"	"1382.75894"	"-0.68"	"-0.00031"	"9/98"	"9"	"98"	"8785004.62371826"	"HCD"	"MS2"	"10.90905"	"99.2"	"100.000"	"44.6856"	"13172"	"13172"	"13157"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"159.9"	""	"121.0"	""	"139.0"	""	"136.7"	"0.3"	"185.4"	"198.0"	""	"753"	"34"	"35.000"	"28.000"	"0.015092631918668"	"25"	"0"	"0.0007066"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDQVIGSHR"	"[K].eIDQVIGSHR.[L]"	"N-Term(TMT6plex)"	"2"	"3"	"P00176; P33272"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1;Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1"	"Q64583; P00176; P33272"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"691.88275"	"1382.75823"	"1382.75894"	"-0.52"	"-0.00036"	"8/98"	"8"	"98"	"675012.077392578"	"HCD"	"MS2"	"10.00326"	"45.5"	"100.000"	"44.6882"	"13162"	"13162"	"13139"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"77.2"	""	"53.6"	""	"61.0"	""	"73.0"	""	"76.9"	"89.6"	""	"753"	"39"	"35.000"	"28.000"	"0.0049404326198073"	"22"	"0"	"0.0003274"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDQVIGSHR"	"[K].eIDQVIGSHR.[L]"	"N-Term(TMT6plex)"	"2"	"3"	"P00176; P33272"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1;Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1"	"Q64583; P00176; P33272"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"691.88281"	"1382.75835"	"1382.75894"	"-0.43"	"-0.00030"	"7/98"	"7"	"98"	"595673.167053223"	"HCD"	"MS2"	"25.83666"	"43.5"	"100.000"	"44.5994"	"13138"	"13138"	"13112"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.4"	""	"60.1"	""	"63.0"	""	"57.1"	"0.4"	"77.0"	"79.7"	""	"753"	"36"	"35.000"	"28.000"	"0.00864499966014304"	"22"	"0"	"0.0008458"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YASENVNK"	"[R].yASENVNk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"691.88733"	"1382.76738"	"1382.76800"	"-0.45"	"-0.00031"	"7/64"	"7"	"64"	"2086728.60870361"	"HCD"	"MS2"	"0"	"176.9"	"100.000"	"36.8564"	"9994"	"9994"	"9969"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"274.9"	""	"224.7"	""	"225.0"	""	"301.2"	""	"320.3"	"330.7"	""	"728"	"28"	"35.000"	"28.000"	"0.0583581322211175"	"20"	"0.0006732"	"0.008173"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YASENVNK"	"[R].yASENVNk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"461.59402"	"1382.76752"	"1382.76800"	"-0.35"	"-0.00016"	"6/64"	"6"	"64"	"3874525.57122803"	"HCD"	"MS2"	"50.35179"	"159.8"	"100.000"	"36.9392"	"10028"	"10028"	"9999"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"249.2"	""	"197.9"	""	"196.8"	""	"275.6"	"0.9"	"297.8"	"296.1"	""	"728"	"33"	"35.000"	"28.000"	"0.0178690466919547"	"15"	"0.000936"	"0.01247"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YASENVNK"	"[R].yASENVNk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"691.88763"	"1382.76799"	"1382.76800"	"-0.01"	"0.00000"	"11/64"	"11"	"64"	"2280774.39154053"	"HCD"	"MS2"	"0"	"203.1"	"100.000"	"37.0758"	"10078"	"10078"	"10050"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"314.2"	""	"227.1"	"2.7"	"274.5"	""	"358.4"	""	"377.4"	"372.5"	""	"769"	"29"	"35.000"	"28.000"	"0.0482943521040679"	"18"	"0.0006732"	"0.008508"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YASENVNK"	"[R].yASENVNk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"691.88788"	"1382.76848"	"1382.76800"	"0.35"	"0.00024"	"7/64"	"7"	"64"	"1225123.59771729"	"HCD"	"MS2"	"0"	"106.5"	"100.000"	"37.1852"	"10128"	"10128"	"10104"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"157.8"	""	"129.8"	""	"140.1"	""	"168.7"	""	"207.7"	"213.5"	""	"763"	"41"	"35.000"	"28.000"	"0.00288731749450502"	"24"	"0"	"0.003006"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YASENVNK"	"[R].yASENVNk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"461.59436"	"1382.76853"	"1382.76800"	"0.38"	"0.00018"	"6/64"	"6"	"64"	"3912651.32623291"	"HCD"	"MS2"	"22.95881"	"156.5"	"100.000"	"37.1863"	"10123"	"10123"	"10095"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"235.3"	""	"200.2"	""	"193.7"	""	"262.5"	"2.8"	"301.3"	"287.6"	""	"763"	"33"	"35.000"	"28.000"	"0.0186850619589062"	"15"	"0.001036"	"0.01362"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YASENVNK"	"[R].yASENVNk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"691.88800"	"1382.76872"	"1382.76800"	"0.52"	"0.00036"	"12/64"	"12"	"64"	"1236164.8795166"	"HCD"	"MS2"	"0"	"112.0"	"100.000"	"37.3906"	"10206"	"10206"	"10184"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"159.1"	""	"134.8"	""	"137.0"	""	"183.6"	""	"222.1"	"227.9"	""	"763"	"33"	"35.000"	"28.000"	"0.0204877630315251"	"21"	"0"	"0.003624"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHPETLEK"	"[K].aHPETLEk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZ76"	"Myoglobin OS=Rattus norvegicus OX=10116 GN=Mb PE=1 SV=3"	"Q9QZ76"	"Myoglobin OS=Rattus norvegicus OX=10116 GN=Mb PE=1 SV=3"	"0"	"3"	"3"	"0.6774"	"0.0000"	"1"	"1"	"1"	"461.60614"	"1382.80387"	"1382.80439"	"-0.38"	"-0.00017"	"5/62"	"5"	"62"	"16723619.8028564"	"HCD"	"MS2"	"22.46595"	"341.0"	"53.064"	"31.0981"	"7649"	"7649"	"7633"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"494.2"	""	"273.6"	""	"279.6"	""	"286.0"	""	"246.9"	"1667.8"	""	"588"	"31"	"34.000"	"27.000"	"0.0234610438056785"	"24"	"0.000936"	"0.01141"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHPETLEK"	"[K].aHPETLEk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZ76"	"Myoglobin OS=Rattus norvegicus OX=10116 GN=Mb PE=1 SV=3"	"Q9QZ76"	"Myoglobin OS=Rattus norvegicus OX=10116 GN=Mb PE=1 SV=3"	"0"	"3"	"3"	"0.6765"	"0.0000"	"1"	"1"	"1"	"461.60626"	"1382.80423"	"1382.80439"	"-0.11"	"-0.00005"	"5/62"	"5"	"62"	"14898732.7779541"	"HCD"	"MS2"	"22.64341"	"506.7"	"87.484"	"31.0635"	"7646"	"7646"	"7634"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"769.5"	""	"402.4"	""	"425.8"	""	"386.3"	""	"362.8"	"2479.9"	""	"602"	"34"	"34.000"	"27.000"	"0.0131089073979356"	"26"	"0"	"0.00328"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVAPIIDVVR"	"[K].nGVAPIIDVVR.[S]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"691.91272"	"1382.81816"	"1382.82048"	"-1.68"	"-0.00116"	"5/100"	"5"	"100"	"185635.645874023"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"89.5963"	"31260"	"31260"	"31246"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.2"	""	"11.5"	""	"9.1"	""	"21.2"	""	"16.6"	"17.7"	""	"519"	"25"	"34.000"	"27.000"	"0.0867236128867766"	"14"	"0.001211"	"0.01461"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVAPIIDVVR"	"[K].nGVAPIIDVVR.[S]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"691.91290"	"1382.81853"	"1382.82048"	"-1.41"	"-0.00098"	"12/100"	"12"	"100"	"414052.959777832"	"HCD"	"MS2"	"22.20268"	"19.1"	"100.000"	"92.5457"	"32405"	"32405"	"32390"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.6"	""	"25.3"	""	"19.1"	""	"34.2"	""	"37.2"	"36.5"	""	"517"	"26"	"34.000"	"27.000"	"0.0607380084189288"	"21"	"0.00263"	"0.02553"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVAPIIDVVR"	"[K].nGVAPIIDVVR.[S]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"691.91302"	"1382.81877"	"1382.82048"	"-1.24"	"-0.00085"	"13/100"	"13"	"100"	"243517.056945801"	"HCD"	"MS2"	"8.355557"	"12.3"	"100.000"	"89.5833"	"31256"	"31256"	"31242"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.8"	""	"16.7"	""	"17.7"	""	"21.0"	""	"24.8"	"20.8"	""	"517"	"30"	"34.000"	"27.000"	"0.023145179189457"	"14"	"0"	"0.002851"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVAPIIDVVR"	"[K].nGVAPIIDVVR.[S]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"691.91370"	"1382.82012"	"1382.82048"	"-0.26"	"-0.00018"	"10/100"	"10"	"100"	"1300972.09405518"	"HCD"	"MS2"	"0"	"46.8"	"100.000"	"92.7710"	"32480"	"32480"	"32474"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.5"	""	"65.4"	""	"63.9"	""	"79.3"	""	"90.9"	"81.4"	""	"521"	"51"	"34.000"	"27.000"	"0.000218679326488303"	"23"	"0"	"9.477E-06"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVAPIIDVVR"	"[K].nGVAPIIDVVR.[S]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"691.91388"	"1382.82048"	"1382.82048"	"0.00"	"0.00000"	"5/100"	"5"	"100"	"159056.528747559"	"HCD"	"MS2"	"33.03905"	"9.5"	"100.000"	"89.3141"	"31151"	"31151"	"31137"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.5"	""	"12.2"	""	"8.0"	""	"18.8"	""	"15.4"	"21.6"	""	"530"	"27"	"34.000"	"27.000"	"0.04923181805993"	"14"	"0.00413"	"0.04516"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVAPIIDVVR"	"[K].nGVAPIIDVVR.[S]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"691.91388"	"1382.82048"	"1382.82048"	"0.00"	"0.00000"	"14/100"	"14"	"100"	"1255752.48059082"	"HCD"	"MS2"	"0"	"46.4"	"100.000"	"92.8252"	"32516"	"32516"	"32503"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.5"	""	"60.7"	""	"69.1"	""	"79.0"	""	"86.9"	"82.1"	""	"530"	"38"	"34.000"	"27.000"	"0.00395590518538434"	"23"	"0"	"3.723E-05"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVAPIIDVVR"	"[K].nGVAPIIDVVR.[S]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"691.91406"	"1382.82085"	"1382.82048"	"0.27"	"0.00018"	"8/100"	"8"	"100"	"348307.602416992"	"HCD"	"MS2"	"19.55033"	"14.3"	"100.000"	"92.4998"	"32377"	"32377"	"32365"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.5"	""	"19.8"	""	"19.9"	""	"23.5"	""	"29.3"	"19.8"	""	"495"	"40"	"33.000"	"26.000"	"0.00237999038899957"	"24"	"0"	"0.001934"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVAPIIDVVR"	"[K].nGVAPIIDVVR.[S]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"691.91455"	"1382.82182"	"1382.82048"	"0.97"	"0.00067"	"6/100"	"6"	"100"	"134436.19921875"	"HCD"	"MS2"	"33.70344"	"8.6"	"100.000"	"89.2985"	"31146"	"31146"	"31133"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.7"	""	"9.2"	""	"12.3"	""	"18.7"	""	"14.1"	"14.6"	""	"492"	"28"	"33.000"	"26.000"	"0.0406382602364338"	"19"	"0.0001301"	"0.004811"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGMQLQGYR"	"[R].dAGmQLQGYR.[Y]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"692.34778"	"1383.68828"	"1383.68882"	"-0.39"	"-0.00027"	"9/82"	"9"	"82"	"1931247.3772583"	"HCD"	"MS2"	"22.07442"	"80.5"	"100.000"	"37.7491"	"10352"	"10352"	"10337"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.0"	""	"88.7"	""	"253.9"	""	"90.2"	""	"108.7"	"112.6"	""	"621"	"28"	"34.000"	"27.000"	"0.0497807693809258"	"17"	"0.0001301"	"0.004457"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGMQLQGYR"	"[R].dAGmQLQGYR.[Y]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"692.34827"	"1383.68926"	"1383.68882"	"0.32"	"0.00022"	"8/82"	"8"	"82"	"1525773.2074585"	"HCD"	"MS2"	"49.88336"	"68.8"	"100.000"	"37.9107"	"10411"	"10411"	"10397"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"94.6"	""	"71.7"	""	"217.0"	""	"73.6"	""	"96.3"	"98.7"	""	"621"	"30"	"34.000"	"27.000"	"0.0339673451727485"	"25"	"0"	"0.001984"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSEEIESAFR"	"[K].sSEEIESAFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"692.34900"	"1383.69072"	"1383.69534"	"-3.34"	"-0.00231"	"7/84"	"7"	"84"	"1442448.25140381"	"HCD"	"MS2"	"0"	"77.0"	"100.000"	"60.1106"	"19429"	"19429"	"19421"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"107.9"	""	"101.0"	""	"92.0"	""	"117.7"	""	"149.4"	"163.2"	""	"643"	"31"	"35.000"	"28.000"	"0.0254203178901944"	"26"	"0"	"0.0009288"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSEEIESAFR"	"[K].sSEEIESAFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"692.35040"	"1383.69353"	"1383.69534"	"-1.31"	"-0.00091"	"12/84"	"12"	"84"	"909922.773376465"	"HCD"	"MS2"	"51.62046"	"52.6"	"100.000"	"60.9665"	"19758"	"19758"	"19734"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"73.1"	""	"58.5"	""	"73.7"	""	"74.3"	"0.4"	"110.3"	"109.0"	""	"659"	"27"	"35.000"	"28.000"	"0.0600973633914321"	"19"	"0"	"0.001379"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSEEIESAFR"	"[K].sSEEIESAFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8197"	"0.0000"	"1"	"1"	"1"	"692.35052"	"1383.69377"	"1383.69534"	"-1.13"	"-0.00078"	"9/84"	"9"	"84"	"5382394.98010254"	"HCD"	"MS2"	"0"	"251.4"	"100.000"	"60.6014"	"19611"	"19611"	"19605"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"332.3"	""	"308.5"	""	"304.4"	""	"337.5"	"0.0"	"493.7"	"611.6"	""	"663"	"61"	"35.000"	"28.000"	"2.40150520764859E-05"	"27"	"0"	"3.144E-05"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSEEIESAFR"	"[K].sSEEIESAFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8136"	"0.0000"	"1"	"1"	"1"	"692.35071"	"1383.69414"	"1383.69534"	"-0.87"	"-0.00060"	"9/84"	"9"	"84"	"5359900.35150146"	"HCD"	"MS2"	"0"	"240.2"	"100.000"	"60.3786"	"19536"	"19536"	"19528"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"307.2"	""	"285.7"	""	"284.2"	""	"347.3"	""	"463.5"	"595.0"	""	"657"	"59"	"35.000"	"28.000"	"3.95854306412136E-05"	"27"	"0"	"6.814E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSEEIESAFR"	"[K].sSEEIESAFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"692.35089"	"1383.69451"	"1383.69534"	"-0.60"	"-0.00042"	"9/84"	"9"	"84"	"1396227.98309326"	"HCD"	"MS2"	"36.3577"	"75.0"	"100.000"	"60.6883"	"19660"	"19660"	"19641"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.2"	""	"87.8"	""	"100.1"	""	"101.7"	""	"160.2"	"179.2"	""	"676"	"36"	"35.000"	"28.000"	"0.00810805526628587"	"21"	"0"	"0.0001105"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSEEIESAFR"	"[K].sSEEIESAFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"692.35095"	"1383.69463"	"1383.69534"	"-0.51"	"-0.00036"	"9/84"	"9"	"84"	"1351316.78845215"	"HCD"	"MS2"	"100"	"72.5"	"100.000"	"60.3240"	"19503"	"19503"	"19494"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"98.8"	""	"95.4"	""	"93.2"	""	"106.4"	""	"135.5"	"164.0"	""	"677"	"23"	"35.000"	"28.000"	"0.157238420662901"	"24"	"0"	"0.0003822"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNDGTDEK"	"[R].fNDGTDEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"692.36102"	"1383.71477"	"1383.71563"	"-0.62"	"-0.00043"	"7/76"	"7"	"76"	"2011069.52038574"	"HCD"	"MS2"	"0"	"186.5"	"100.000"	"42.2632"	"12191"	"12191"	"12172"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"333.6"	""	"181.6"	""	"211.1"	""	"295.4"	""	"377.0"	"371.7"	""	"673"	"30"	"35.000"	"28.000"	"0.0309018918716725"	"22"	"0.0003538"	"0.00648"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNDGTDEK"	"[R].fNDGTDEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"692.36121"	"1383.71514"	"1383.71563"	"-0.36"	"-0.00025"	"6/76"	"6"	"76"	"754833.028076172"	"HCD"	"MS2"	"0"	"74.9"	"100.000"	"42.4820"	"12270"	"12270"	"12245"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"161.5"	""	"68.8"	""	"81.0"	""	"116.9"	""	"148.2"	"138.1"	""	"664"	"26"	"35.000"	"28.000"	"0.0811218943494399"	"22"	"0.0001301"	"0.004491"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNDGTDEK"	"[R].fNDGTDEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"692.36121"	"1383.71514"	"1383.71563"	"-0.36"	"-0.00025"	"7/76"	"7"	"76"	"2283897.63348389"	"HCD"	"MS2"	"48.02228"	"185.9"	"100.000"	"41.9599"	"12067"	"12067"	"12044"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"284.6"	""	"190.4"	""	"220.1"	""	"334.9"	""	"371.2"	"366.3"	""	"664"	"22"	"35.000"	"28.000"	"0.201436461423384"	"21"	"0.000936"	"0.01171"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNDGTDEK"	"[R].fNDGTDEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"692.36145"	"1383.71562"	"1383.71563"	"0.00"	"0.00000"	"6/76"	"6"	"76"	"2762088.56970215"	"HCD"	"MS2"	"38.03381"	"236.6"	"100.000"	"42.1214"	"12123"	"12123"	"12097"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"380.0"	""	"262.3"	""	"259.9"	""	"431.0"	""	"452.3"	"458.7"	""	"701"	"28"	"35.000"	"28.000"	"0.0592499546540964"	"22"	"0.0003538"	"0.006187"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDENFILK"	"[K].FEDENFILk.[H]"	"K9(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"692.37061"	"1383.73393"	"1383.73575"	"-1.31"	"-0.00091"	"6/76"	"6"	"76"	"191946.700500488"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"85.1951"	"29551"	"29551"	"29532"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.1"	""	"10.4"	""	"11.2"	""	"13.7"	""	"16.0"	"16.6"	""	"722"	"38"	"35.000"	"28.000"	"0.00607445336046438"	"18"	"0.003449"	"0.03493"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDENFILK"	"[K].FEDENFILk.[H]"	"K9(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"692.37115"	"1383.73503"	"1383.73575"	"-0.52"	"-0.00036"	"5/76"	"5"	"76"	"176278.486328125"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"85.1766"	"29544"	"29544"	"29530"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.6"	""	"10.1"	""	"10.3"	""	"17.2"	""	"18.5"	"16.2"	""	"718"	"30"	"35.000"	"28.000"	"0.0342842338381695"	"23"	"0.003449"	"0.03283"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDENFILK"	"[K].FEDENFILk.[H]"	"K9(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"692.37122"	"1383.73516"	"1383.73575"	"-0.43"	"-0.00030"	"6/76"	"6"	"76"	"276340.051818848"	"HCD"	"MS2"	"0"	"13.9"	"100.000"	"85.4807"	"29659"	"29659"	"29644"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.1"	""	"16.8"	""	"18.3"	""	"20.3"	""	"33.5"	"28.0"	""	"706"	"47"	"35.000"	"28.000"	"0.000642354403089324"	"25"	"0.0006732"	"0.008195"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQDPLSDNPR"	"[R].iQDPLSDNPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"692.37372"	"1383.74016"	"1383.74296"	"-2.02"	"-0.00140"	"9/96"	"9"	"96"	"1518191.55340576"	"HCD"	"MS2"	"25.01902"	"72.1"	"100.000"	"57.2132"	"18277"	"18277"	"18253"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"110.0"	""	"102.3"	""	"114.6"	""	"105.0"	""	"118.6"	"136.1"	""	"698"	"50"	"35.000"	"28.000"	"0.000343419875910635"	"27"	"0"	"2.544E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQDPLSDNPR"	"[R].iQDPLSDNPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"692.37415"	"1383.74101"	"1383.74296"	"-1.41"	"-0.00097"	"9/96"	"9"	"96"	"1415670.63635254"	"HCD"	"MS2"	"25.36274"	"67.8"	"100.000"	"57.4022"	"18339"	"18339"	"18323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"95.5"	""	"107.9"	""	"96.7"	""	"105.2"	""	"120.7"	"120.4"	""	"713"	"50"	"35.000"	"28.000"	"0.000388203578273369"	"28"	"0"	"5.454E-05"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQDPLSDNPR"	"[R].iQDPLSDNPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"692.37494"	"1383.74260"	"1383.74296"	"-0.26"	"-0.00018"	"9/96"	"9"	"96"	"7152348.94000244"	"HCD"	"MS2"	"0"	"272.2"	"100.000"	"57.4967"	"18393"	"18393"	"18377"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"396.6"	"3.3"	"430.6"	""	"437.7"	""	"378.3"	"4.9"	"460.7"	"463.0"	""	"694"	"45"	"35.000"	"28.000"	"0.00111001660306291"	"22"	"0"	"0.0001764"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQDPLSDNPR"	"[R].iQDPLSDNPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"692.37518"	"1383.74309"	"1383.74296"	"0.09"	"0.00007"	"9/96"	"9"	"96"	"6847490.51190186"	"HCD"	"MS2"	"0"	"255.3"	"100.000"	"57.6852"	"18455"	"18455"	"18438"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"372.8"	""	"383.0"	""	"411.9"	""	"369.5"	"7.2"	"446.9"	"424.7"	""	"697"	"50"	"35.000"	"28.000"	"0.0003821226513559"	"24"	"0"	"4.692E-05"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDDHTLIR"	"[K].gAGTDDHTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"692.87177"	"1384.73625"	"1384.73821"	"-1.41"	"-0.00098"	"7/88"	"7"	"88"	"1787189.67877197"	"HCD"	"MS2"	"0"	"84.4"	"100.000"	"29.2269"	"6904"	"6904"	"6880"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"138.3"	""	"92.0"	""	"109.3"	""	"153.8"	""	"142.6"	"162.9"	""	"671"	"45"	"35.000"	"28.000"	"0.00110329722158892"	"21"	"0"	"1.902E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDDHTLIR"	"[K].gAGTDDHTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9038"	"0.0000"	"1"	"1"	"1"	"692.87207"	"1384.73686"	"1384.73821"	"-0.97"	"-0.00067"	"10/88"	"10"	"88"	"566793.103881836"	"HCD"	"MS2"	"0"	"31.4"	"100.000"	"29.5233"	"7023"	"7023"	"7006"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.6"	""	"32.9"	""	"42.4"	""	"55.7"	""	"54.9"	"72.1"	""	"670"	"52"	"35.000"	"28.000"	"0.000198173147448784"	"21"	"0"	"2.951E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDDHTLIR"	"[K].gAGTDDHTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9306"	"0.0000"	"1"	"1"	"1"	"462.25070"	"1384.73755"	"1384.73821"	"-0.47"	"-0.00022"	"10/88"	"10"	"88"	"26680472.7080078"	"HCD"	"MS2"	"5.740203"	"257.4"	"35.033"	"29.4864"	"7008"	"7008"	"6994"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"363.3"	""	"298.9"	""	"339.2"	""	"448.7"	""	"465.0"	"527.3"	""	"655"	"72"	"35.000"	"28.000"	"2.16875904962327E-06"	"22"	"0"	"6.917E-06"	"0.938"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDDHTLIR"	"[K].gAGTDDHTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"462.25073"	"1384.73764"	"1384.73821"	"-0.41"	"-0.00019"	"10/88"	"10"	"88"	"15893193.9451904"	"HCD"	"MS2"	"5.564793"	"269.4"	"57.540"	"29.5536"	"7024"	"7024"	"7007"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"387.3"	""	"314.3"	""	"374.3"	""	"446.3"	""	"470.9"	"569.3"	""	"655"	"68"	"35.000"	"28.000"	"5.79710683848956E-06"	"17"	"0"	"1.085E-05"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDDHTLIR"	"[K].gAGTDDHTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"462.25079"	"1384.73783"	"1384.73821"	"-0.27"	"-0.00013"	"10/88"	"10"	"88"	"48695691.6519775"	"HCD"	"MS2"	"35.53225"	"482.1"	"39.015"	"29.2131"	"6898"	"6898"	"6880"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"654.3"	""	"569.5"	""	"606.1"	""	"879.5"	""	"893.0"	"973.5"	""	"655"	"70"	"35.000"	"28.000"	"3.54986064341944E-06"	"21"	"0"	"8.48E-06"	"0.918"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDDHTLIR"	"[K].gAGTDDHTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"692.87286"	"1384.73845"	"1384.73821"	"0.18"	"0.00012"	"10/88"	"10"	"88"	"2113198.24719238"	"HCD"	"MS2"	"0"	"96.6"	"100.000"	"29.2848"	"6915"	"6915"	"6891"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"153.7"	""	"100.5"	""	"119.7"	""	"172.3"	""	"178.8"	"190.4"	""	"653"	"44"	"35.000"	"28.000"	"0.00121306252300227"	"19"	"0"	"7.125E-06"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDDHTLIR"	"[K].gAGTDDHTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"462.25113"	"1384.73883"	"1384.73821"	"0.45"	"0.00021"	"10/88"	"10"	"88"	"56051914.0002441"	"HCD"	"MS2"	"24.3525"	"454.1"	"32.005"	"29.2666"	"6908"	"6908"	"6891"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"630.8"	""	"500.4"	""	"610.1"	""	"813.8"	""	"838.6"	"915.6"	""	"654"	"70"	"35.000"	"28.000"	"3.45579325512866E-06"	"21"	"0"	"8.99E-06"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANFSNMTSER"	"[K].aNFSNMTSER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K3K4"	"Serpin B10 OS=Rattus norvegicus OX=10116 GN=Serpinb10 PE=2 SV=1"	"Q8K3K4"	"Serpin B10 OS=Rattus norvegicus OX=10116 GN=Serpinb10 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"693.33612"	"1385.66496"	"1385.66808"	"-2.25"	"-0.00156"	"5/98"	"5"	"98"	"353187.88293457"	"HCD"	"MS2"	"0"	"33.4"	"100.000"	"44.5205"	"13106"	"13106"	"13080"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.7"	""	"38.6"	""	"40.2"	""	"55.7"	"2.7"	"59.5"	"67.4"	""	"401"	"2"	"33.000"	"26.000"	"11.5641675910146"	"13"	"0.005183"	"0.05885"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAGLGDVAEVR"	"[R].gIAGLGDVAEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"693.40045"	"1385.79363"	"1385.79499"	"-0.99"	"-0.00068"	"10/94"	"10"	"94"	"2024477.06109619"	"HCD"	"MS2"	"3.137382"	"89.6"	"100.000"	"78.8543"	"27023"	"27023"	"27010"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"145.4"	""	"134.3"	""	"129.1"	""	"140.3"	"1.0"	"151.6"	"146.1"	""	"700"	"69"	"35.000"	"28.000"	"4.73225397117997E-06"	"23"	"0"	"5.403E-07"	"1.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAGLGDVAEVR"	"[R].gIAGLGDVAEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.9138"	"0.0000"	"1"	"1"	"1"	"693.40045"	"1385.79363"	"1385.79499"	"-0.99"	"-0.00068"	"10/94"	"10"	"94"	"2288385.81225586"	"HCD"	"MS2"	"43.71896"	"105.0"	"100.000"	"78.5845"	"26915"	"26915"	"26898"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"175.9"	""	"144.6"	""	"152.2"	""	"158.3"	""	"183.1"	"178.9"	""	"700"	"58"	"35.000"	"28.000"	"5.22478043352649E-05"	"21"	"0"	"8.936E-07"	"1.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAGLGDVAEVR"	"[R].gIAGLGDVAEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"693.40051"	"1385.79375"	"1385.79499"	"-0.90"	"-0.00062"	"7/94"	"7"	"94"	"161143.445007324"	"HCD"	"MS2"	"14.03044"	"12.5"	"100.000"	"79.1632"	"27143"	"27143"	"27120"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.5"	""	"16.5"	""	"14.0"	""	"25.6"	""	"24.0"	"23.0"	""	"687"	"33"	"35.000"	"28.000"	"0.0167080875155017"	"22"	"0.0003538"	"0.007288"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDREQLVQK"	"[M].vDREQLVQk.[A]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"1"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"693.40051"	"1385.79375"	"1385.79499"	"-0.90"	"-0.00062"	"6/80"	"6"	"80"	"1310230.61273193"	"HCD"	"MS2"	"3.973428"	"75.6"	"100.000"	"51.2963"	"15865"	"15865"	"15847"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"192.7"	""	"109.1"	""	"131.8"	""	"99.1"	"0.5"	"82.3"	"95.4"	""	"687"	"25"	"35.000"	"28.000"	"0.0974825186269675"	"26"	"0.001374"	"0.0168"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAGLGDVAEVR"	"[R].gIAGLGDVAEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.8971"	"0.0000"	"1"	"1"	"1"	"693.40051"	"1385.79375"	"1385.79499"	"-0.90"	"-0.00062"	"10/94"	"10"	"94"	"2019934.7088623"	"HCD"	"MS2"	"4.927414"	"89.1"	"100.000"	"78.8683"	"27024"	"27024"	"27014"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"136.8"	""	"130.0"	""	"141.8"	""	"127.7"	""	"148.5"	"163.7"	""	"687"	"68"	"35.000"	"28.000"	"4.89696208402352E-06"	"23"	"0"	"1.391E-07"	"1.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAGLGDVAEVR"	"[R].gIAGLGDVAEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"693.40063"	"1385.79399"	"1385.79499"	"-0.72"	"-0.00050"	"10/94"	"10"	"94"	"1990776.89898682"	"HCD"	"MS2"	"40.77285"	"96.8"	"100.000"	"78.5821"	"26908"	"26908"	"26900"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"172.5"	""	"131.1"	""	"133.8"	""	"153.1"	""	"166.3"	"158.8"	""	"697"	"58"	"35.000"	"28.000"	"5.01421304522162E-05"	"20"	"0"	"1.024E-06"	"1.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAGLGDVAEVR"	"[R].gIAGLGDVAEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"693.40076"	"1385.79424"	"1385.79499"	"-0.55"	"-0.00038"	"7/94"	"7"	"94"	"161073.196655273"	"HCD"	"MS2"	"42.68994"	"11.9"	"100.000"	"79.1657"	"27148"	"27148"	"27125"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.6"	""	"20.5"	""	"13.8"	""	"18.4"	"1.8"	"24.9"	"19.6"	""	"697"	"31"	"35.000"	"28.000"	"0.0269279183905852"	"14"	"0"	"0.002249"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDREQLVQK"	"[M].vDREQLVQk.[A]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"1"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"693.40082"	"1385.79436"	"1385.79499"	"-0.46"	"-0.00032"	"8/80"	"8"	"80"	"588211.064575195"	"HCD"	"MS2"	"12.72987"	"44.6"	"100.000"	"51.7345"	"16033"	"16033"	"16011"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"99.2"	""	"60.2"	""	"69.0"	""	"69.7"	""	"64.4"	"60.5"	""	"693"	"22"	"35.000"	"28.000"	"0.24193752801274"	"22"	"0.001374"	"0.01623"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEGQVLVLDGR"	"[M].aEGQVLVLDGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"0"	"2"	"2"	"0.6591"	"0.0000"	"1"	"1"	"1"	"693.40112"	"1385.79497"	"1385.79499"	"-0.02"	"-0.00001"	"9/108"	"9"	"108"	"2218986.86889648"	"HCD"	"MS2"	"0"	"91.1"	"100.000"	"64.3505"	"21132"	"21132"	"21115"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"128.0"	""	"127.4"	""	"115.9"	""	"137.4"	"0.7"	"186.4"	"167.9"	""	"701"	"44"	"35.000"	"28.000"	"0.00128732446324579"	""	"0"	"9.069E-06"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEGQVLVLDGR"	"[M].aEGQVLVLDGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"693.40161"	"1385.79595"	"1385.79499"	"0.69"	"0.00048"	"9/108"	"9"	"108"	"1481912.15026855"	"HCD"	"MS2"	"0"	"64.2"	"100.000"	"64.3697"	"21153"	"21153"	"21135"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.8"	""	"88.1"	""	"92.5"	""	"97.5"	"1.0"	"122.1"	"117.5"	""	"684"	"46"	"35.000"	"28.000"	"0.000814753258520672"	""	"0"	"7.469E-06"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDREQLVQK"	"[M].vDREQLVQk.[A]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"1"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"693.40192"	"1385.79656"	"1385.79499"	"1.13"	"0.00078"	"6/80"	"6"	"80"	"767160.009643555"	"HCD"	"MS2"	"0"	"49.0"	"100.000"	"51.4026"	"15898"	"15898"	"15869"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"128.1"	""	"80.0"	""	"75.0"	""	"67.2"	""	"47.5"	"64.7"	""	"667"	"24"	"35.000"	"28.000"	"0.141284929177522"	"18"	"0.001134"	"0.01368"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSMPGTLSSQA"	"[R].ySmPGTLSSQA.[-]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q6AYD6"	"PDZ and LIM domain protein 2 OS=Rattus norvegicus OX=10116 GN=Pdlim2 PE=1 SV=1"	"Q6AYD6"	"PDZ and LIM domain protein 2 OS=Rattus norvegicus OX=10116 GN=Pdlim2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"693.84155"	"1386.67583"	"1386.67725"	"-1.02"	"-0.00071"	"6/94"	"6"	"94"	"206897.148193359"	"HCD"	"MS2"	"27.27257"	"14.4"	"100.000"	"52.4648"	"16343"	"16343"	"16312"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.3"	""	"22.1"	""	"16.6"	""	"22.1"	""	"25.8"	"32.9"	""	"468"	"19"	"33.000"	"26.000"	"0.283279963250813"	"14"	"0.00413"	"0.04575"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SLMDHTIPEV"	"[K].sLmDHTIPEV.[-]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q9JI92"	"Syntenin-1 OS=Rattus norvegicus OX=10116 GN=Sdcbp PE=1 SV=1"	"Q9JI92"	"Syntenin-1 OS=Rattus norvegicus OX=10116 GN=Sdcbp PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"693.86060"	"1386.71391"	"1386.71363"	"0.20"	"0.00014"	"5/90"	"5"	"90"	"705345.655700684"	"HCD"	"MS2"	"45.98638"	"25.8"	"100.000"	"67.3751"	"22358"	"22358"	"22338"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.1"	""	"46.1"	""	"44.3"	""	"35.0"	""	"40.6"	"40.4"	""	"570"	"5"	"34.000"	"27.000"	"9.63484783187047"	"18"	"0.003111"	"0.03148"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAMGEEYK"	"[K].tAMGEEYk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"693.87006"	"1386.73284"	"1386.73392"	"-0.78"	"-0.00054"	"7/66"	"7"	"66"	"1530371.71636963"	"HCD"	"MS2"	"0"	"143.5"	"100.000"	"44.6252"	"13148"	"13148"	"13128"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"258.4"	""	"232.8"	""	"225.4"	""	"159.3"	""	"246.7"	"234.8"	""	"682"	"36"	"35.000"	"28.000"	"0.00874489056452542"	""	"0"	"0.003552"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAMGEEYK"	"[K].tAMGEEYk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"693.87018"	"1386.73308"	"1386.73392"	"-0.61"	"-0.00042"	"12/66"	"12"	"66"	"1498017.35961914"	"HCD"	"MS2"	"19.80851"	"142.8"	"100.000"	"44.7688"	"13195"	"13195"	"13169"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"258.6"	""	"211.0"	""	"236.1"	""	"152.9"	""	"247.5"	"243.8"	""	"680"	"34"	"35.000"	"28.000"	"0.0148074037053093"	"25"	"0.0001301"	"0.00408"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAMGEEYK"	"[K].tAMGEEYk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"693.87036"	"1386.73345"	"1386.73392"	"-0.34"	"-0.00024"	"14/66"	"14"	"66"	"931923.886535645"	"HCD"	"MS2"	"0"	"92.3"	"100.000"	"45.0566"	"13312"	"13312"	"13293"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"148.3"	""	"142.5"	""	"142.1"	""	"111.9"	""	"164.8"	"164.8"	""	"679"	"30"	"35.000"	"28.000"	"0.0330247682472279"	"24"	"0.0001301"	"0.004414"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAMGEEYK"	"[K].tAMGEEYk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"693.87073"	"1386.73418"	"1386.73392"	"0.18"	"0.00013"	"7/66"	"7"	"66"	"577794.575622559"	"HCD"	"MS2"	"0"	"57.9"	"100.000"	"44.9575"	"13283"	"13283"	"13257"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.6"	""	"82.2"	""	"85.3"	""	"75.8"	""	"115.6"	"103.5"	""	"686"	"32"	"35.000"	"28.000"	"0.0233503890031953"	"18"	"0"	"0.002829"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQEIAPGDK"	"[K].aQEIAPGDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"693.90271"	"1386.79814"	"1386.79930"	"-0.83"	"-0.00058"	"13/88"	"13"	"88"	"1374415.66912842"	"HCD"	"MS2"	"0"	"88.0"	"100.000"	"41.2470"	"11776"	"11776"	"11760"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"153.9"	""	"101.4"	""	"124.1"	""	"136.9"	""	"148.0"	"175.1"	""	"714"	"47"	"35.000"	"28.000"	"0.000674012911627376"	"28"	"0"	"0.0009591"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQEIAPGDK"	"[K].aQEIAPGDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"693.90344"	"1386.79961"	"1386.79930"	"0.22"	"0.00015"	"8/88"	"8"	"88"	"1240996.77459717"	"HCD"	"MS2"	"0"	"84.5"	"100.000"	"41.4245"	"11839"	"11839"	"11816"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"148.2"	""	"99.1"	""	"113.3"	""	"136.8"	""	"145.8"	"162.6"	""	"774"	"50"	"35.000"	"28.000"	"0.000402449104175846"	"27"	"0"	"0.001148"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGAEDELQALR"	"[R].gGAEDELQALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"694.37262"	"1387.73796"	"1387.73787"	"0.06"	"0.00004"	"10/90"	"10"	"90"	"1477155.85009766"	"HCD"	"MS2"	"0"	"85.6"	"100.000"	"59.7756"	"19308"	"19308"	"19286"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"129.1"	""	"102.2"	""	"100.4"	""	"120.6"	"0.6"	"168.9"	"190.7"	""	"722"	"45"	"35.000"	"28.000"	"0.00102213251048358"	"26"	"0"	"1.4E-05"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGAEDELQALR"	"[R].gGAEDELQALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"694.37286"	"1387.73845"	"1387.73787"	"0.42"	"0.00029"	"9/90"	"9"	"90"	"1481253.23718262"	"HCD"	"MS2"	"0"	"93.1"	"100.000"	"59.5388"	"19226"	"19226"	"19206"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"132.3"	""	"103.2"	""	"105.8"	""	"130.0"	""	"197.0"	"216.9"	""	"720"	"52"	"35.000"	"28.000"	"0.000214932703170181"	""	"0"	"1.016E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSEHSIDGK"	"[K].gSEHSIDGk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"463.25775"	"1387.75870"	"1387.75816"	"0.39"	"0.00018"	"6/74"	"6"	"74"	"16937298.7067871"	"HCD"	"MS2"	"39.35916"	"546.6"	"77.219"	"25.2039"	"5256"	"5256"	"5243"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"690.6"	""	"610.4"	""	"645.2"	""	"955.6"	"0.5"	"1114.5"	"1173.7"	""	"781"	"18"	"35.000"	"28.000"	"0.618900791656065"	"14"	"0.0001301"	"0.004709"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSEHSIDGK"	"[K].gSEHSIDGk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"463.25781"	"1387.75888"	"1387.75816"	"0.52"	"0.00024"	"6/74"	"6"	"74"	"16461063.5288696"	"HCD"	"MS2"	"40.47848"	"674.3"	"100.000"	"25.1348"	"5243"	"5243"	"5226"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"860.4"	""	"767.0"	""	"773.8"	""	"1209.5"	""	"1342.1"	"1466.6"	""	"783"	"17"	"35.000"	"28.000"	"0.866426578810606"	"14"	"0.0003538"	"0.0071"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGTHLEAK"	"[R].sSGTHLEAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"463.26920"	"1387.79303"	"1387.79455"	"-1.09"	"-0.00051"	"8/76"	"8"	"76"	"16776135.0655518"	"HCD"	"MS2"	"6.931351"	"499.6"	"83.457"	"24.8092"	"5114"	"5114"	"5099"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"701.5"	""	"646.7"	""	"752.0"	""	"805.1"	""	"913.8"	"913.8"	""	"839"	"30"	"36.000"	"29.000"	"0.0388805110907637"	"26"	"0"	"0.001237"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGTHLEAK"	"[R].sSGTHLEAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"2"	"2"	"0.5745"	"0.0000"	"1"	"1"	"1"	"694.40070"	"1387.79411"	"1387.79455"	"-0.31"	"-0.00022"	"8/76"	"8"	"76"	"393773.155944824"	"HCD"	"MS2"	"0"	"31.2"	"100.000"	"24.8761"	"5125"	"5125"	"5101"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.8"	""	"40.2"	""	"50.6"	""	"51.0"	"1.0"	"50.5"	"63.5"	""	"895"	"47"	"36.000"	"29.000"	"0.000972283777541525"	""	"0"	"0.0003747"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGTHLEAK"	"[R].sSGTHLEAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"463.26978"	"1387.79477"	"1387.79455"	"0.16"	"0.00007"	"10/76"	"10"	"76"	"15539308.25177"	"HCD"	"MS2"	"3.292193"	"596.4"	"100.000"	"24.8900"	"5130"	"5130"	"5116"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"821.5"	""	"759.0"	""	"858.4"	""	"977.4"	""	"1087.9"	"1159.1"	""	"888"	"25"	"36.000"	"29.000"	"0.128938605858221"	"24"	"0"	"0.001594"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGTHLEAK"	"[R].sSGTHLEAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"694.40204"	"1387.79680"	"1387.79455"	"1.62"	"0.00113"	"6/76"	"6"	"76"	"341597.438537598"	"HCD"	"MS2"	"100"	"29.5"	"100.000"	"24.8572"	"5133"	"5133"	"5113"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.9"	""	"46.0"	""	"36.4"	""	"48.8"	""	"59.7"	"58.4"	""	"889"	"21"	"36.000"	"29.000"	"0.332561342977208"	"22"	"0.0003538"	"0.007277"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"AQAEQAALK"	"[R].aQAEQAALk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.0500"	"0.0000"	"1"	"1"	"1"	"694.41766"	"1387.82805"	"1387.83094"	"-2.08"	"-0.00144"	"8/78"	"8"	"78"	"863405.977905273"	"HCD"	"MS2"	"29.20632"	"73.9"	"100.000"	"40.8641"	"11622"	"11622"	"11606"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"112.9"	""	"97.2"	""	"108.4"	""	"103.6"	""	"132.7"	"151.2"	""	"687"	"20"	"35.000"	"28.000"	"0.328796163489779"	"20"	"0"	"0.000973"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAEQAALK"	"[R].aQAEQAALk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.1071"	"0.0000"	"1"	"1"	"1"	"694.41852"	"1387.82976"	"1387.83094"	"-0.85"	"-0.00059"	"8/78"	"8"	"78"	"769031.998413086"	"HCD"	"MS2"	"100"	"66.1"	"100.000"	"41.1402"	"11724"	"11724"	"11703"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"88.7"	""	"79.4"	""	"85.6"	""	"94.1"	""	"128.0"	"153.4"	""	"713"	"28"	"35.000"	"28.000"	"0.0527302140381966"	""	"0"	"0.0003536"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEEGHPFK"	"[K].sEEGHPFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"694.88147"	"1388.75566"	"1388.75744"	"-1.28"	"-0.00089"	"10/60"	"10"	"60"	"522405.974853516"	"HCD"	"MS2"	"0"	"39.6"	"100.000"	"29.9872"	"7212"	"7212"	"7185"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.4"	""	"44.6"	""	"45.4"	""	"60.4"	"0.9"	"82.4"	"84.0"	""	"923"	"30"	"36.000"	"29.000"	"0.0437695120813364"	""	"0.002379"	"0.02444"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEEGHPFK"	"[K].sEEGHPFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"694.88153"	"1388.75578"	"1388.75744"	"-1.19"	"-0.00083"	"6/60"	"6"	"60"	"427572.680236816"	"HCD"	"MS2"	"0"	"34.0"	"100.000"	"30.0357"	"7220"	"7220"	"7197"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.7"	""	"34.5"	""	"46.7"	""	"50.7"	"0.4"	"65.3"	"67.8"	""	"927"	"28"	"36.000"	"29.000"	"0.0790769187302948"	""	"0.004867"	"0.05209"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEEGHPFK"	"[K].sEEGHPFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"463.59030"	"1388.75635"	"1388.75744"	"-0.78"	"-0.00036"	"9/60"	"9"	"60"	"11908711.1618042"	"HCD"	"MS2"	"14.74184"	"438.1"	"100.000"	"29.8705"	"7152"	"7152"	"7136"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"608.1"	""	"556.8"	""	"546.8"	""	"719.2"	""	"856.9"	"870.9"	""	"916"	"25"	"36.000"	"29.000"	"0.143835298179531"	"15"	"0.002973"	"0.03036"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"TDEGHPFK"	"[].tDEGHPFk.[]"	"N-Term(TMT6plex); K8(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"463.59030"	"1388.75635"	"1388.75744"	"-0.78"	"-0.00036"	"9/60"	"9"	"60"	"11908711.1618042"	"HCD"	"MS2"	"14.74184"	"438.1"	"100.000"	"29.8705"	"7152"	"7152"	"7136"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"608.1"	""	"556.8"	""	"546.8"	""	"719.2"	""	"856.9"	"870.9"	""	"916"	"25"	"36.000"	"29.000"	"0.143835298179531"	"15"	"0.004817"	"0.05063"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEEGHPFK"	"[K].sEEGHPFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"463.59036"	"1388.75653"	"1388.75744"	"-0.65"	"-0.00030"	"7/60"	"7"	"60"	"5404855.45111084"	"HCD"	"MS2"	"34.86055"	"222.9"	"99.976"	"30.1755"	"7288"	"7288"	"7269"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"306.4"	""	"280.9"	""	"301.0"	""	"352.4"	""	"419.2"	"459.3"	""	"921"	"22"	"36.000"	"29.000"	"0.287892025023203"	"17"	"0.005874"	"0.06549"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"TDEGHPFK"	"[].tDEGHPFk.[]"	"N-Term(TMT6plex); K8(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"463.59036"	"1388.75653"	"1388.75744"	"-0.65"	"-0.00030"	"7/60"	"7"	"60"	"5404855.45111084"	"HCD"	"MS2"	"34.86055"	"222.9"	"99.976"	"30.1755"	"7288"	"7288"	"7269"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"306.4"	""	"280.9"	""	"301.0"	""	"352.4"	""	"419.2"	"459.3"	""	"921"	"22"	"36.000"	"29.000"	"0.287892025023203"	"17"	"0.009021"	"0.1164"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEEGHPFK"	"[K].sEEGHPFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"463.59042"	"1388.75672"	"1388.75744"	"-0.52"	"-0.00024"	"8/60"	"8"	"60"	"13109018.1222534"	"HCD"	"MS2"	"17.72362"	"506.2"	"100.000"	"29.8609"	"7160"	"7160"	"7139"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"708.6"	""	"655.5"	""	"672.5"	""	"816.2"	""	"965.8"	"984.4"	""	"923"	"22"	"36.000"	"29.000"	"0.312731555762327"	"15"	"0.003507"	"0.03592"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"TDEGHPFK"	"[].tDEGHPFk.[]"	"N-Term(TMT6plex); K8(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"463.59042"	"1388.75672"	"1388.75744"	"-0.52"	"-0.00024"	"8/60"	"8"	"60"	"13109018.1222534"	"HCD"	"MS2"	"17.72362"	"506.2"	"100.000"	"29.8609"	"7160"	"7160"	"7139"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"708.6"	""	"655.5"	""	"672.5"	""	"816.2"	""	"965.8"	"984.4"	""	"923"	"22"	"36.000"	"29.000"	"0.312731555762327"	"15"	"0.005309"	"0.05996"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEEGHPFK"	"[K].sEEGHPFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"0"	"3"	"3"	"0.2917"	"0.0000"	"1"	"1"	"1"	"463.59052"	"1388.75699"	"1388.75744"	"-0.32"	"-0.00015"	"9/60"	"9"	"60"	"6001587.21643066"	"HCD"	"MS2"	"31.88252"	"239.3"	"100.000"	"30.1825"	"7279"	"7279"	"7263"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"325.7"	""	"296.8"	""	"328.1"	""	"387.4"	""	"454.6"	"478.6"	""	"950"	"24"	"36.000"	"29.000"	"0.190411690872969"	""	"0.005309"	"0.06014"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGDAALNK"	"[K].lEGDAALNk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B0BN85"	"Protein SGT1 homolog OS=Rattus norvegicus OX=10116 GN=Sugt1 PE=2 SV=1"	"B0BN85"	"Protein SGT1 homolog OS=Rattus norvegicus OX=10116 GN=Sugt1 PE=2 SV=1"	"0"	"2"	"2"	"0.5682"	"0.0000"	"1"	"1"	"1"	"694.91028"	"1388.81328"	"1388.81495"	"-1.20"	"-0.00084"	"8/70"	"8"	"70"	"367403.765930176"	"HCD"	"MS2"	"13.78549"	"32.1"	"100.000"	"59.0162"	"18998"	"18998"	"18968"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.4"	""	"38.1"	""	"37.7"	""	"56.9"	""	"69.3"	"66.6"	""	"818"	"44"	"36.000"	"29.000"	"0.00151259725530129"	""	"0"	"0.0003784"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQEVIADK"	"[K].qQEVIADk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"694.91046"	"1388.81365"	"1388.81495"	"-0.94"	"-0.00065"	"7/78"	"7"	"78"	"1103473.78729248"	"HCD"	"MS2"	"0"	"85.8"	"100.000"	"42.6314"	"12331"	"12331"	"12308"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"124.3"	""	"81.5"	""	"90.0"	""	"157.4"	""	"172.0"	"190.4"	""	"811"	"46"	"36.000"	"29.000"	"0.00099538446531028"	"27"	"0"	"0.00241"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGDAALNK"	"[K].lEGDAALNk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B0BN85"	"Protein SGT1 homolog OS=Rattus norvegicus OX=10116 GN=Sugt1 PE=2 SV=1"	"B0BN85"	"Protein SGT1 homolog OS=Rattus norvegicus OX=10116 GN=Sugt1 PE=2 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"694.91052"	"1388.81377"	"1388.81495"	"-0.85"	"-0.00059"	"8/70"	"8"	"70"	"387799.745910645"	"HCD"	"MS2"	"0"	"34.0"	"100.000"	"58.8024"	"18926"	"18926"	"18895"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.1"	""	"34.6"	""	"42.6"	""	"61.1"	"0.9"	"67.3"	"71.8"	""	"824"	"46"	"36.000"	"29.000"	"0.00112433884651691"	"27"	"0"	"0.0001212"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQEVIADK"	"[K].qQEVIADk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6596"	"0.0000"	"1"	"1"	"1"	"694.91083"	"1388.81438"	"1388.81495"	"-0.41"	"-0.00029"	"7/78"	"7"	"78"	"1293821.41729736"	"HCD"	"MS2"	"0"	"105.4"	"100.000"	"42.5530"	"12310"	"12310"	"12284"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"150.7"	""	"92.0"	""	"108.9"	""	"186.5"	""	"221.9"	"244.5"	""	"823"	"47"	"36.000"	"29.000"	"0.000914892020003052"	""	"0"	"0.001994"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYFDEEMNR"	"[R].gYFDEEMNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"695.31866"	"1389.63005"	"1389.63063"	"-0.42"	"-0.00029"	"11/70"	"11"	"70"	"1479404.06988525"	"HCD"	"MS2"	"14.92914"	"96.6"	"100.000"	"57.3883"	"18348"	"18348"	"18329"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"180.5"	""	"134.2"	""	"144.6"	""	"93.4"	""	"162.0"	"200.6"	""	"215"	"34"	"30.000"	"23.000"	"0.00455416188503257"	"15"	"0"	"0.0003066"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYFDEEMNR"	"[R].gYFDEEMNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"695.31885"	"1389.63042"	"1389.63063"	"-0.15"	"-0.00011"	"7/70"	"7"	"70"	"1383784.40930176"	"HCD"	"MS2"	"15.62745"	"88.5"	"100.000"	"57.5838"	"18413"	"18413"	"18394"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"156.7"	""	"135.1"	""	"119.2"	""	"86.4"	""	"153.0"	"188.0"	""	"214"	"30"	"30.000"	"23.000"	"0.0100088407133788"	"14"	"0"	"0.0003454"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYFDEEMNR"	"[R].gYFDEEMNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"695.31891"	"1389.63054"	"1389.63063"	"-0.07"	"-0.00005"	"6/70"	"6"	"70"	"598849.156555176"	"HCD"	"MS2"	"15.60672"	"46.2"	"100.000"	"57.8877"	"18537"	"18537"	"18514"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"71.2"	""	"63.1"	""	"79.5"	""	"57.8"	""	"69.9"	"96.8"	""	"214"	"25"	"30.000"	"23.000"	"0.0326124763890194"	"14"	"0"	"0.003167"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNQGLQTDQR"	"[K].tNQGLQTDQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8630"	"0.0000"	"1"	"1"	"1"	"695.36780"	"1389.72832"	"1389.72837"	"-0.04"	"-0.00003"	"8/102"	"8"	"102"	"829371.228759766"	"HCD"	"MS2"	"0"	"43.0"	"100.000"	"23.5534"	"4615"	"4615"	"4588"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"80.0"	""	"51.7"	""	"43.0"	""	"83.8"	"1.1"	"75.6"	"72.1"	""	"796"	"73"	"35.000"	"29.000"	"1.98556026009085E-06"	"27"	"0"	"1.267E-05"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNQGLQTDQR"	"[K].tNQGLQTDQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8356"	"0.0000"	"1"	"1"	"1"	"695.36780"	"1389.72832"	"1389.72837"	"-0.04"	"-0.00003"	"8/102"	"8"	"102"	"812658.371826172"	"HCD"	"MS2"	"0"	"43.9"	"100.000"	"23.6429"	"4634"	"4634"	"4613"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.0"	""	"53.7"	""	"46.6"	""	"76.1"	"0.5"	"84.7"	"76.1"	""	"796"	"73"	"35.000"	"29.000"	"1.97189175940307E-06"	"29"	"0"	"2.182E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEVYYDK"	"[K].dEVYYDk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"695.36896"	"1389.73064"	"1389.73022"	"0.30"	"0.00021"	"6/58"	"6"	"58"	"420459.28692627"	"HCD"	"MS2"	"0"	"39.5"	"100.000"	"52.0347"	"16167"	"16167"	"16142"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.5"	""	"44.2"	""	"49.5"	""	"64.7"	"3.1"	"85.2"	"74.7"	""	"818"	"30"	"36.000"	"29.000"	"0.0441289209392"	"27"	"0.001465"	"0.01828"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLTYENVER"	"[K].hLTYENVER.[W]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"463.91525"	"1389.73120"	"1389.73239"	"-0.86"	"-0.00040"	"8/80"	"8"	"80"	"7426595.87011719"	"HCD"	"MS2"	"11.02749"	"105.4"	"100.000"	"33.1934"	"8504"	"8504"	"8484"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"150.5"	""	"120.0"	""	"121.4"	""	"176.1"	"0.7"	"206.5"	"225.1"	""	"815"	"43"	"36.000"	"29.000"	"0.00216834115651219"	"20"	"0"	"0.0005874"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLTYENVER"	"[K].hLTYENVER.[W]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"463.91571"	"1389.73258"	"1389.73239"	"0.13"	"0.00006"	"7/80"	"7"	"80"	"5066150.76898193"	"HCD"	"MS2"	"14.17411"	"78.4"	"100.000"	"33.1588"	"8497"	"8497"	"8475"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"112.8"	""	"97.2"	""	"93.9"	""	"132.7"	""	"155.4"	"151.6"	""	"804"	"23"	"36.000"	"29.000"	"0.190645278074618"	"15"	"0.0003538"	"0.006925"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAETTLLELR"	"[R].dAETTLLELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"695.39233"	"1389.77739"	"1389.77868"	"-0.92"	"-0.00064"	"8/86"	"8"	"86"	"1209035.1862793"	"HCD"	"MS2"	"0"	"58.6"	"100.000"	"86.4785"	"30053"	"30053"	"30045"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"99.5"	""	"84.2"	""	"86.1"	""	"84.7"	"3.7"	"88.8"	"107.3"	""	"867"	"54"	"36.000"	"29.000"	"0.000193191983680318"	"28"	"0"	"2.702E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAETTLLELR"	"[R].dAETTLLELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.5846"	"0.0000"	"1"	"1"	"1"	"695.39246"	"1389.77764"	"1389.77868"	"-0.75"	"-0.00052"	"7/86"	"7"	"86"	"5640559.30853271"	"HCD"	"MS2"	"0"	"230.4"	"100.000"	"86.2121"	"29945"	"29945"	"29931"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"365.6"	""	"278.5"	""	"344.7"	""	"348.4"	""	"380.5"	"467.0"	""	"863"	"65"	"36.000"	"29.000"	"1.3303956005326E-05"	""	"0"	"2.384E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAETTLLELR"	"[R].dAETTLLELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.7167"	"0.0000"	"1"	"1"	"1"	"695.39276"	"1389.77825"	"1389.77868"	"-0.31"	"-0.00021"	"7/86"	"7"	"86"	"934856.87902832"	"HCD"	"MS2"	"3.34847"	"44.2"	"100.000"	"85.9342"	"29835"	"29835"	"29816"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.0"	""	"54.8"	""	"71.8"	""	"63.0"	""	"70.3"	"91.2"	""	"865"	"60"	"36.000"	"29.000"	"4.47698987088816E-05"	""	"0"	"3.098E-05"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAETTLLELR"	"[R].dAETTLLELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.5902"	"0.0000"	"1"	"1"	"1"	"695.39301"	"1389.77873"	"1389.77868"	"0.04"	"0.00003"	"7/86"	"7"	"86"	"529820.950439453"	"HCD"	"MS2"	"14.90395"	"25.3"	"100.000"	"85.9162"	"29828"	"29828"	"29807"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.7"	""	"29.7"	""	"40.2"	""	"37.9"	"0.8"	"46.5"	"47.8"	""	"865"	"61"	"36.000"	"29.000"	"3.62231414519877E-05"	""	"0"	"9.972E-06"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAETTLLELR"	"[R].dAETTLLELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.6833"	"0.0000"	"1"	"1"	"1"	"695.39331"	"1389.77934"	"1389.77868"	"0.48"	"0.00033"	"7/86"	"7"	"86"	"5475332.20281982"	"HCD"	"MS2"	"0"	"219.9"	"100.000"	"86.1984"	"29942"	"29942"	"29927"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"341.9"	""	"276.4"	""	"327.2"	""	"320.2"	"0.6"	"369.0"	"446.7"	""	"861"	"60"	"36.000"	"29.000"	"4.34483367456013E-05"	""	"0"	"3.375E-05"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVMPEVNK"	"[K].dVMPEVNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"695.39349"	"1389.77971"	"1389.78121"	"-1.08"	"-0.00075"	"7/66"	"7"	"66"	"389771.860290527"	"HCD"	"MS2"	"0"	"31.2"	"100.000"	"61.0685"	"19815"	"19815"	"19794"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.0"	""	"33.4"	""	"38.4"	""	"50.1"	""	"66.2"	"69.7"	""	"848"	"31"	"36.000"	"29.000"	"0.0360052521415397"	"21"	"0.003449"	"0.03478"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVMPEVNK"	"[K].dVMPEVNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"695.39380"	"1389.78032"	"1389.78121"	"-0.64"	"-0.00044"	"7/66"	"7"	"66"	"421554.071411133"	"HCD"	"MS2"	"0"	"34.8"	"100.000"	"61.1509"	"19833"	"19833"	"19814"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.2"	""	"31.5"	""	"46.2"	""	"46.7"	""	"75.7"	"84.2"	""	"843"	"31"	"36.000"	"29.000"	"0.0339467012965406"	"22"	"0.003507"	"0.03702"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKEGVVEITGK"	"[K].TKEGVVEITGk.[H]"	"K11(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"1"	"2"	"2"	"0.2549"	"0.0000"	"1"	"1"	"1"	"695.42139"	"1389.83550"	"1389.81506"	"14.70"	"0.01022"	"14/114"	"14"	"114"	"716329.449645996"	"HCD"	"MS2"	"26.27895"	"58.4"	"100.000"	"63.5372"	"20800"	"20800"	"20779"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.9"	""	"69.5"	""	"74.9"	""	"95.2"	""	"115.4"	"141.3"	""	"913"	"51"	"36.000"	"29.000"	"0.000346290663000822"	"22"	"0.003111"	"0.03062"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESVEIINK"	"[R].eSVEIINk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"695.42181"	"1389.83635"	"1389.83535"	"0.72"	"0.00050"	"7/64"	"7"	"64"	"378244.981567383"	"HCD"	"MS2"	"0"	"31.1"	"100.000"	"62.0861"	"20227"	"20227"	"20211"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.8"	""	"44.2"	""	"47.3"	""	"40.9"	""	"56.5"	"66.6"	""	"883"	"39"	"36.000"	"29.000"	"0.00515146445932415"	"24"	"0"	"0.002163"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPDQWSK"	"[K].nGPDQWSk.[L]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"695.87177"	"1390.73625"	"1390.73670"	"-0.32"	"-0.00022"	"6/76"	"6"	"76"	"3986227.33990479"	"HCD"	"MS2"	"31.47938"	"303.6"	"100.000"	"53.0778"	"16581"	"16581"	"16563"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"527.6"	""	"286.9"	"2.7"	"341.6"	""	"588.8"	"5.0"	"580.6"	"543.6"	""	"891"	"22"	"36.000"	"29.000"	"0.2678229000488"	"20"	"0.003449"	"0.03513"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPDQWSK"	"[K].nGPDQWSk.[L]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"695.87189"	"1390.73650"	"1390.73670"	"-0.15"	"-0.00010"	"6/76"	"6"	"76"	"640116.389404297"	"HCD"	"MS2"	"4.735826"	"51.5"	"100.000"	"53.4415"	"16730"	"16730"	"16706"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.7"	""	"48.9"	""	"63.4"	""	"92.4"	"0.7"	"96.6"	"93.8"	""	"882"	"25"	"36.000"	"29.000"	"0.128362624906737"	"22"	"0.008522"	"0.1056"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPDQWSK"	"[K].nGPDQWSk.[L]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"695.87189"	"1390.73650"	"1390.73670"	"-0.15"	"-0.00010"	"7/76"	"7"	"76"	"1221491.74719238"	"HCD"	"MS2"	"0"	"112.0"	"100.000"	"50.1154"	"15385"	"15385"	"15366"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"224.9"	""	"103.0"	""	"122.6"	""	"213.8"	""	"201.7"	"196.2"	""	"882"	"31"	"36.000"	"29.000"	"0.0341537652830911"	"24"	"0.0003538"	"0.007141"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPDQWSK"	"[K].nGPDQWSk.[L]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"695.87189"	"1390.73650"	"1390.73670"	"-0.15"	"-0.00010"	"6/76"	"6"	"76"	"1229890.48059082"	"HCD"	"MS2"	"5.575446"	"98.4"	"100.000"	"53.0889"	"16597"	"16597"	"16577"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"202.5"	""	"87.5"	""	"122.0"	""	"178.6"	"0.6"	"169.2"	"170.4"	""	"882"	"30"	"36.000"	"29.000"	"0.0490273691731182"	"22"	"0.007808"	"0.09598"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPDQWSK"	"[K].nGPDQWSk.[L]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"695.87207"	"1390.73686"	"1390.73670"	"0.12"	"0.00008"	"7/76"	"7"	"76"	"3923847.89733887"	"HCD"	"MS2"	"36.79939"	"309.0"	"100.000"	"52.7664"	"16466"	"16466"	"16449"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"526.8"	""	"299.9"	"2.6"	"364.2"	""	"617.7"	"6.1"	"578.4"	"531.0"	""	"882"	"23"	"36.000"	"29.000"	"0.202973148949378"	"20"	"0.002973"	"0.02877"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPDQWSK"	"[K].nGPDQWSk.[L]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"695.87305"	"1390.73882"	"1390.73670"	"1.52"	"0.00106"	"7/76"	"7"	"76"	"1164409.60375977"	"HCD"	"MS2"	"22.87364"	"106.0"	"100.000"	"50.4616"	"15515"	"15515"	"15486"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"209.9"	""	"95.7"	""	"118.1"	""	"209.1"	"0.8"	"183.4"	"185.6"	""	"866"	"33"	"36.000"	"29.000"	"0.0233070815829553"	"23"	"0.0003538"	"0.006658"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].EITALAPSTMk.[I]"	"K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9077"	"0.0000"	"1"	"1"	"1"	"695.89392"	"1390.78057"	"1390.78132"	"-0.54"	"-0.00038"	"7/96"	"7"	"96"	"805251.105529785"	"HCD"	"MS2"	"0"	"33.3"	"100.000"	"62.6557"	"20457"	"20457"	"20433"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.7"	""	"48.2"	""	"45.7"	""	"34.0"	"0.0"	"64.7"	"65.8"	""	"1068"	"65"	"37.000"	"30.000"	"1.6015527851394E-05"	"23"	"0"	"0.0001594"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].EITALAPSTMk.[I]"	"K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"695.89417"	"1390.78105"	"1390.78132"	"-0.19"	"-0.00013"	"7/96"	"7"	"96"	"824024.90435791"	"HCD"	"MS2"	"37.57495"	"58.5"	"100.000"	"63.0602"	"20606"	"20606"	"20583"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.6"	""	"77.7"	""	"85.5"	""	"94.2"	""	"101.9"	"114.8"	""	"1048"	"51"	"37.000"	"30.000"	"0.000454288022897306"	"27"	"0"	"0.002408"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].EITALAPSTMk.[I]"	"K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9623"	"0.0000"	"1"	"1"	"1"	"695.89435"	"1390.78142"	"1390.78132"	"0.07"	"0.00005"	"7/96"	"7"	"96"	"644322.424987793"	"HCD"	"MS2"	"10.19407"	"30.6"	"100.000"	"62.7263"	"20470"	"20470"	"20442"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.9"	""	"42.3"	""	"43.7"	""	"30.4"	""	"66.9"	"64.7"	""	"1042"	"53"	"37.000"	"30.000"	"0.000256943551860522"	"18"	"0"	"0.000236"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGIEETAAK"	"[K].nGIEETAAk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"695.89960"	"1390.79192"	"1390.79422"	"-1.65"	"-0.00115"	"14/84"	"14"	"84"	"1087353.49603271"	"HCD"	"MS2"	"0"	"92.2"	"100.000"	"38.7903"	"10777"	"10777"	"10752"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"137.3"	""	"123.8"	""	"99.1"	""	"173.2"	"0.2"	"162.6"	"177.5"	""	"1030"	"50"	"37.000"	"30.000"	"0.000494091325230706"	"27"	"0"	"0.0003697"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAEELQTK"	"[K].nAEELQTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"695.89996"	"1390.79265"	"1390.79422"	"-1.13"	"-0.00078"	"14/78"	"14"	"78"	"3108876.50469971"	"HCD"	"MS2"	"0"	"243.7"	"100.000"	"39.3268"	"10986"	"10986"	"10967"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"361.8"	""	"212.4"	""	"257.0"	""	"536.7"	""	"415.1"	"533.0"	""	"1032"	"50"	"37.000"	"30.000"	"0.000519576741127531"	"26"	"0"	"0.002865"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAQADAEK"	"[K].sLAQADAEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"695.90009"	"1390.79289"	"1390.79422"	"-0.95"	"-0.00066"	"7/88"	"7"	"88"	"461351.637817383"	"HCD"	"MS2"	"0"	"39.8"	"100.000"	"42.2885"	"12202"	"12202"	"12172"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.7"	""	"50.2"	""	"54.5"	""	"51.7"	""	"75.9"	"98.0"	""	"1048"	"32"	"37.000"	"30.000"	"0.0324587123340233"	"22"	"0"	"0.0008254"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVLGDADQK"	"[R].sVLGDADQk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"695.90009"	"1390.79289"	"1390.79422"	"-0.95"	"-0.00066"	"8/78"	"8"	"78"	"508599.557739258"	"HCD"	"MS2"	"19.12385"	"41.8"	"100.000"	"49.4941"	"15120"	"15120"	"15089"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.1"	""	"49.1"	""	"53.1"	""	"75.0"	""	"75.7"	"69.9"	""	"1048"	"56"	"37.000"	"30.000"	"0.000121991981901646"	"28"	"0"	"0.0001481"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAQADAEK"	"[K].sLAQADAEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"695.90009"	"1390.79289"	"1390.79422"	"-0.95"	"-0.00066"	"14/88"	"14"	"88"	"1214175.6171875"	"HCD"	"MS2"	"0"	"94.8"	"100.000"	"42.0036"	"12085"	"12085"	"12060"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"156.2"	""	"110.7"	""	"135.9"	""	"126.1"	"1.9"	"159.3"	"207.4"	""	"1048"	"49"	"37.000"	"30.000"	"0.000617065530124903"	"30"	"0"	"0.000373"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAEELQTK"	"[K].nAEELQTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"464.26920"	"1390.79303"	"1390.79422"	"-0.85"	"-0.00039"	"6/78"	"6"	"78"	"3070232.93920898"	"HCD"	"MS2"	"12.47668"	"108.7"	"100.000"	"39.3729"	"11005"	"11005"	"10983"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"140.8"	""	"117.6"	""	"135.1"	""	"195.8"	""	"196.7"	"246.4"	""	"1046"	"24"	"37.000"	"30.000"	"0.192531453215044"	"20"	"0.004022"	"0.04274"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAEELQTK"	"[K].nAEELQTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"695.90033"	"1390.79338"	"1390.79422"	"-0.60"	"-0.00042"	"14/78"	"14"	"78"	"3275665.52856445"	"HCD"	"MS2"	"0"	"250.9"	"100.000"	"39.0961"	"10901"	"10901"	"10883"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"383.1"	""	"218.2"	""	"271.9"	""	"548.8"	""	"425.6"	"534.0"	""	"1045"	"50"	"37.000"	"30.000"	"0.000528550264850797"	"26"	"0.0001301"	"0.004135"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVLGDADQK"	"[R].sVLGDADQk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"695.90051"	"1390.79375"	"1390.79422"	"-0.34"	"-0.00023"	"7/78"	"7"	"78"	"565329.778076172"	"HCD"	"MS2"	"13.17126"	"46.0"	"100.000"	"49.0926"	"14968"	"14968"	"14944"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.9"	""	"45.6"	""	"56.2"	""	"82.6"	""	"87.1"	"99.6"	""	"1046"	"45"	"37.000"	"30.000"	"0.00160879863410939"	"28"	"0"	"0.0003151"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAQADAEK"	"[K].sLAQADAEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"695.90070"	"1390.79411"	"1390.79422"	"-0.07"	"-0.00005"	"8/88"	"8"	"88"	"1458638.75964355"	"HCD"	"MS2"	"6.217229"	"112.9"	"100.000"	"42.1582"	"12138"	"12138"	"12113"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"172.9"	""	"140.7"	""	"160.0"	""	"151.7"	"2.6"	"194.6"	"247.2"	""	"1045"	"47"	"37.000"	"30.000"	"0.00109417375818209"	"29"	"0"	"0.0003991"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGIEETAAK"	"[K].nGIEETAAk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"0"	"2"	"2"	"0.7547"	"0.0000"	"1"	"1"	"1"	"695.90167"	"1390.79607"	"1390.79422"	"1.33"	"0.00093"	"14/84"	"14"	"84"	"1232570.77954102"	"HCD"	"MS2"	"0"	"105.3"	"100.000"	"39.0212"	"10862"	"10862"	"10837"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"148.8"	"2.9"	"134.9"	""	"138.7"	""	"189.1"	"1.0"	"186.6"	"196.0"	""	"1011"	"53"	"37.000"	"30.000"	"0.000265901728160502"	"29"	"0"	"0.0003237"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESAAHDYTLR"	"[R].eSAAHDYTLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"0"	"3"	"3"	"0.7556"	"0.0000"	"1"	"1"	"1"	"464.57507"	"1391.71067"	"1391.71166"	"-0.71"	"-0.00033"	"9/86"	"9"	"86"	"3659874.83935547"	"HCD"	"MS2"	"19.50459"	"79.9"	"100.000"	"29.7919"	"7132"	"7132"	"7115"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"116.3"	""	"105.2"	""	"120.8"	""	"122.9"	""	"148.9"	"148.4"	""	"716"	"45"	"35.000"	"28.000"	"0.00115049047283323"	"27"	"0"	"0.0001491"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETWLSENQR"	"[R].eTWLSENQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"696.35919"	"1391.71111"	"1391.71166"	"-0.40"	"-0.00028"	"7/78"	"7"	"78"	"967188.991760254"	"HCD"	"MS2"	"20.66793"	"60.4"	"100.000"	"51.1510"	"15806"	"15806"	"15783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"123.4"	""	"73.0"	""	"60.6"	""	"81.9"	""	"106.8"	"127.8"	""	"716"	"39"	"35.000"	"28.000"	"0.0045173425738346"	"22"	"0"	"0.0003528"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETWLSENQR"	"[R].eTWLSENQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"696.35931"	"1391.71135"	"1391.71166"	"-0.22"	"-0.00015"	"7/78"	"7"	"78"	"1014893.91131592"	"HCD"	"MS2"	"21.89507"	"59.3"	"100.000"	"51.4809"	"15930"	"15930"	"15899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.3"	""	"71.3"	""	"68.6"	""	"85.3"	""	"106.2"	"130.6"	""	"703"	"40"	"35.000"	"28.000"	"0.00388083634895579"	"23"	"0"	"0.0003369"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETWLSENQR"	"[R].eTWLSENQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"696.35962"	"1391.71196"	"1391.71166"	"0.22"	"0.00015"	"7/78"	"7"	"78"	"578020.857971191"	"HCD"	"MS2"	"4.254219"	"41.8"	"100.000"	"51.4552"	"15930"	"15930"	"15909"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.1"	""	"55.7"	""	"47.7"	""	"51.3"	""	"74.4"	"89.5"	""	"701"	"45"	"35.000"	"28.000"	"0.00107321818350858"	"20"	"0"	"0.0003332"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETWLSENQR"	"[R].eTWLSENQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"696.35992"	"1391.71257"	"1391.71166"	"0.66"	"0.00046"	"7/78"	"7"	"78"	"340888.398620605"	"HCD"	"MS2"	"5.601941"	"27.8"	"100.000"	"51.8219"	"16069"	"16069"	"16043"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.4"	""	"27.5"	""	"33.1"	""	"44.9"	"3.4"	"52.1"	"52.2"	""	"737"	"41"	"35.000"	"28.000"	"0.0028277270882983"	"22"	"0"	"0.002772"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEEQTQQIR"	"[K].mEEQTQQIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"696.36078"	"1391.71428"	"1391.71503"	"-0.54"	"-0.00037"	"6/80"	"6"	"80"	"761600.205932617"	"HCD"	"MS2"	"0"	"50.8"	"100.000"	"33.2781"	"8546"	"8546"	"8522"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"62.9"	""	"66.4"	""	"51.6"	""	"88.8"	""	"101.8"	"111.0"	""	"735"	"41"	"35.000"	"28.000"	"0.00265617902823798"	"28"	"0"	"0.0003424"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTEAAAADVQR"	"[R].mTEAAAADVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"696.36145"	"1391.71562"	"1391.71503"	"0.43"	"0.00030"	"9/94"	"9"	"94"	"964656.133422852"	"HCD"	"MS2"	"0"	"55.9"	"100.000"	"40.8049"	"11588"	"11588"	"11573"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"98.1"	""	"73.3"	""	"66.3"	""	"65.8"	"0.1"	"119.3"	"106.9"	""	"732"	"62"	"35.000"	"28.000"	"2.31462737603696E-05"	"23"	"0"	"2.499E-06"	"1.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEEQTQQIR"	"[K].mEEQTQQIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"696.36169"	"1391.71611"	"1391.71503"	"0.78"	"0.00054"	"6/80"	"6"	"80"	"747951.352783203"	"HCD"	"MS2"	"0"	"48.4"	"100.000"	"33.2806"	"8540"	"8540"	"8514"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.7"	""	"65.2"	""	"60.4"	""	"78.6"	""	"95.7"	"100.7"	""	"726"	"36"	"35.000"	"28.000"	"0.00974780033774038"	"27"	"0"	"0.0005396"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTEAAAADVQR"	"[R].mTEAAAADVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.9077"	"0.0000"	"1"	"1"	"1"	"696.36188"	"1391.71648"	"1391.71503"	"1.04"	"0.00072"	"9/94"	"9"	"94"	"1041607.73480225"	"HCD"	"MS2"	"0"	"57.8"	"100.000"	"40.6366"	"11530"	"11530"	"11506"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"111.7"	""	"67.9"	""	"56.9"	""	"70.4"	"2.1"	"126.7"	"112.8"	""	"739"	"65"	"35.000"	"28.000"	"1.24341024884244E-05"	"23"	"0"	"3.394E-06"	"1.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGIEETAAK"	"[K].nGIEETAAk.[C]"	"N-Term(TMT6plex); N1(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"696.39081"	"1391.77434"	"1391.77823"	"-2.80"	"-0.00195"	"14/84"	"14"	"84"	"819055.919494629"	"HCD"	"MS2"	"0"	"63.4"	"100.000"	"43.8734"	"12846"	"12846"	"12825"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"97.4"	""	"67.8"	""	"65.7"	""	"118.9"	""	"126.8"	"129.7"	""	"1038"	"47"	"37.000"	"30.000"	"0.0010918610102388"	"26"	"0"	"0.0005611"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGIEETAAK"	"[K].nGIEETAAk.[C]"	"N-Term(TMT6plex); N1(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"696.39160"	"1391.77593"	"1391.77823"	"-1.66"	"-0.00115"	"8/84"	"8"	"84"	"805982.488220215"	"HCD"	"MS2"	"0"	"60.0"	"100.000"	"43.9680"	"12874"	"12874"	"12852"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"84.8"	""	"68.2"	""	"69.5"	""	"111.6"	"1.2"	"117.9"	"115.6"	""	"994"	"34"	"36.000"	"29.000"	"0.0187221788095003"	"22"	"0"	"0.0008449"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDLSGADIK"	"[K].dDLSGADIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"2"	"2"	"0.4750"	"0.0000"	"1"	"1"	"1"	"696.39252"	"1391.77776"	"1391.77823"	"-0.34"	"-0.00024"	"7/76"	"7"	"76"	"1207171.93597412"	"HCD"	"MS2"	"21.22261"	"86.2"	"100.000"	"58.2592"	"18704"	"18704"	"18687"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"127.9"	""	"95.9"	""	"118.8"	""	"157.3"	""	"168.1"	"154.6"	""	"1006"	"40"	"37.000"	"30.000"	"0.00450368477071446"	""	"0"	"0.0003482"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDLSGADIK"	"[K].dDLSGADIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"696.39276"	"1391.77825"	"1391.77823"	"0.01"	"0.00001"	"13/76"	"13"	"76"	"1302944.53582764"	"HCD"	"MS2"	"16.56389"	"98.3"	"100.000"	"58.4523"	"18768"	"18768"	"18751"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"136.5"	""	"124.2"	""	"130.6"	""	"172.2"	"2.3"	"180.0"	"185.9"	""	"999"	"44"	"36.000"	"29.000"	"0.00202085657902872"	"29"	"0"	"0.0004638"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEAVSASLK"	"[K].eEAVSASLk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"696.41040"	"1391.81352"	"1391.81462"	"-0.78"	"-0.00055"	"8/76"	"8"	"76"	"3012390.48175049"	"HCD"	"MS2"	"29.28562"	"239.3"	"100.000"	"52.9951"	"16548"	"16548"	"16533"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"274.9"	""	"207.1"	""	"234.9"	""	"460.0"	""	"551.1"	"552.0"	""	"798"	"32"	"36.000"	"29.000"	"0.0279880664069569"	"25"	"0"	"0.001788"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEAVSASLK"	"[K].eEAVSASLk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"696.41107"	"1391.81487"	"1391.81462"	"0.18"	"0.00013"	"8/76"	"8"	"76"	"2925117.71429443"	"HCD"	"MS2"	"20.26851"	"219.2"	"100.000"	"52.6650"	"16424"	"16424"	"16408"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"222.9"	""	"174.7"	""	"200.6"	""	"440.8"	""	"528.0"	"528.7"	""	"797"	"36"	"36.000"	"29.000"	"0.00955934918229266"	"26"	"0"	"0.0008036"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDNDFLEVR"	"[R].vGDNDFLEVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"D2XV59"	"GTP-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gtpbp1 PE=1 SV=1"	"D2XV59"	"GTP-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gtpbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"696.86945"	"1392.73161"	"1392.73206"	"-0.32"	"-0.00022"	"8/94"	"8"	"94"	"261826.971740723"	"HCD"	"MS2"	"0"	"17.9"	"100.000"	"77.9040"	"26635"	"26635"	"26618"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.2"	""	"18.2"	""	"25.9"	""	"31.9"	""	"35.7"	"28.3"	""	"800"	"41"	"36.000"	"29.000"	"0.00334241207292499"	"21"	"0.0001301"	"0.004625"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDNDFLEVR"	"[R].vGDNDFLEVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"D2XV59"	"GTP-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gtpbp1 PE=1 SV=1"	"D2XV59"	"GTP-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gtpbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9123"	"0.0000"	"1"	"1"	"1"	"696.86945"	"1392.73161"	"1392.73206"	"-0.32"	"-0.00022"	"8/94"	"8"	"94"	"410620.367431641"	"HCD"	"MS2"	"0"	"22.4"	"100.000"	"78.0600"	"26705"	"26705"	"26696"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.7"	""	"25.5"	""	"32.1"	""	"43.6"	""	"37.5"	"46.8"	""	"800"	"57"	"36.000"	"29.000"	"8.1857785468987E-05"	"21"	"0"	"7.332E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDNDFLEVR"	"[R].vGDNDFLEVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"D2XV59"	"GTP-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gtpbp1 PE=1 SV=1"	"D2XV59"	"GTP-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gtpbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"696.86963"	"1392.73198"	"1392.73206"	"-0.06"	"-0.00004"	"6/94"	"6"	"94"	"217902.293029785"	"HCD"	"MS2"	"4.889921"	"13.2"	"100.000"	"78.2062"	"26756"	"26756"	"26738"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.5"	""	"15.8"	""	"18.8"	""	"21.8"	""	"30.8"	"20.6"	""	"825"	"40"	"36.000"	"29.000"	"0.00383198634546723"	"21"	"0.001374"	"0.01637"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDAVAASSAK"	"[K].dDAVAASSAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.8033"	"0.0000"	"1"	"1"	"1"	"696.88867"	"1392.77007"	"1392.77348"	"-2.45"	"-0.00171"	"9/86"	"9"	"86"	"694745.169250488"	"HCD"	"MS2"	"0"	"57.5"	"100.000"	"35.4964"	"9437"	"9437"	"9410"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.9"	""	"43.2"	""	"56.4"	""	"113.6"	"1.9"	"134.1"	"118.5"	""	"966"	"61"	"36.000"	"29.000"	"4.09210841029908E-05"	"28"	"0"	"7.697E-06"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDAVAASSAK"	"[K].dDAVAASSAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"696.88910"	"1392.77092"	"1392.77348"	"-1.84"	"-0.00128"	"9/86"	"9"	"86"	"618522.883544922"	"HCD"	"MS2"	"0"	"50.6"	"100.000"	"35.3385"	"9378"	"9378"	"9350"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.1"	""	"42.1"	""	"54.3"	""	"107.5"	""	"99.4"	"102.0"	""	"978"	"72"	"36.000"	"29.000"	"3.16452739101057E-06"	""	"0"	"3.427E-06"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGTVSGEEK"	"[K].aGGTVSGEEk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"696.88940"	"1392.77153"	"1392.77348"	"-1.40"	"-0.00097"	"8/82"	"8"	"82"	"1189253.66662598"	"HCD"	"MS2"	"0"	"89.8"	"100.000"	"29.1258"	"6863"	"6863"	"6832"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"169.6"	""	"119.0"	"2.4"	"104.6"	""	"160.3"	""	"143.8"	"150.4"	""	"967"	"56"	"36.000"	"29.000"	"0.000116250941380335"	""	"0"	"2.872E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGTVSGEEK"	"[K].aGGTVSGEEk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"696.89044"	"1392.77361"	"1392.77348"	"0.09"	"0.00006"	"9/82"	"9"	"82"	"1284981.18395996"	"HCD"	"MS2"	"0"	"105.5"	"100.000"	"29.1816"	"6873"	"6873"	"6843"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"203.3"	""	"132.6"	""	"130.3"	""	"172.8"	""	"180.6"	"180.3"	""	"964"	"55"	"36.000"	"29.000"	"0.000137419080493688"	"27"	"0"	"2.812E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGTVSGEEK"	"[K].aGGTVSGEEk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"696.89191"	"1392.77654"	"1392.77348"	"2.19"	"0.00153"	"6/82"	"6"	"82"	"200281.996520996"	"HCD"	"MS2"	"0"	"17.8"	"100.000"	"29.4450"	"6992"	"6992"	"6971"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.6"	""	"24.7"	""	"24.9"	""	"26.0"	""	"28.7"	"31.5"	""	"948"	"32"	"36.000"	"29.000"	"0.0297699662077512"	"29"	"0.005309"	"0.06009"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVEEELSK"	"[R].tVEEELSk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50411"	"Protein phosphatase inhibitor 2 OS=Rattus norvegicus OX=10116 GN=Ppp1r2 PE=1 SV=2"	"P50411"	"Protein phosphatase inhibitor 2 OS=Rattus norvegicus OX=10116 GN=Ppp1r2 PE=1 SV=2"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"696.90271"	"1392.79814"	"1392.79863"	"-0.35"	"-0.00024"	"7/68"	"7"	"68"	"553291.444763184"	"HCD"	"MS2"	"12.30751"	"53.6"	"100.000"	"55.6260"	"17616"	"17616"	"17586"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"72.2"	""	"63.8"	""	"57.8"	""	"115.5"	""	"99.1"	"103.3"	""	"892"	"38"	"36.000"	"29.000"	"0.00708491849874609"	""	"0"	"0.002449"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEESITK"	"[R].vEEESITk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"Q9JK25; O55156"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2; CAP-Gly domain-containing linker protein 2 OS=Rattus norvegicus OX=10116 GN=Clip2 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"696.90277"	"1392.79827"	"1392.79863"	"-0.26"	"-0.00018"	"7/66"	"7"	"66"	"2025979.49334717"	"HCD"	"MS2"	"17.03116"	"78.0"	"100.000"	"49.6001"	"15163"	"15163"	"15137"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.4"	""	"87.3"	""	"96.0"	""	"136.3"	"0.8"	"156.2"	"159.7"	""	"892"	"14"	"36.000"	"29.000"	"1.61932812427465"	"16"	"0.0023"	"0.0233"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVEEELSK"	"[R].tVEEELSk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50411"	"Protein phosphatase inhibitor 2 OS=Rattus norvegicus OX=10116 GN=Ppp1r2 PE=1 SV=2"	"P50411"	"Protein phosphatase inhibitor 2 OS=Rattus norvegicus OX=10116 GN=Ppp1r2 PE=1 SV=2"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"696.90289"	"1392.79851"	"1392.79863"	"-0.09"	"-0.00006"	"7/68"	"7"	"68"	"548624.068359375"	"HCD"	"MS2"	"17.56153"	"51.6"	"100.000"	"55.4329"	"17551"	"17551"	"17527"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.9"	""	"53.2"	""	"60.1"	""	"106.6"	"1.4"	"104.2"	"97.1"	""	"890"	"40"	"36.000"	"29.000"	"0.0049586106744832"	""	"0"	"0.001526"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENTQTTIK"	"[R].eNTQTTIk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"696.90808"	"1392.80889"	"1392.80987"	"-0.70"	"-0.00049"	"14/78"	"14"	"78"	"1776793.93865967"	"HCD"	"MS2"	"30.79232"	"137.3"	"100.000"	"33.3952"	"8586"	"8586"	"8566"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"221.0"	""	"155.0"	""	"158.1"	""	"247.4"	""	"263.2"	"257.7"	""	"805"	"46"	"36.000"	"29.000"	"0.000972222985864088"	"25"	"0"	"0.002112"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENTQTTIK"	"[R].eNTQTTIk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"696.90820"	"1392.80913"	"1392.80987"	"-0.53"	"-0.00037"	"7/78"	"7"	"78"	"735095.538391113"	"HCD"	"MS2"	"0"	"64.8"	"100.000"	"33.7259"	"8726"	"8726"	"8702"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"96.2"	""	"68.2"	""	"80.4"	""	"97.6"	""	"138.7"	"139.2"	""	"805"	"31"	"36.000"	"29.000"	"0.0322675420513541"	"23"	"0.0001301"	"0.00465"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENTQTTIK"	"[R].eNTQTTIk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"696.90826"	"1392.80925"	"1392.80987"	"-0.44"	"-0.00031"	"7/78"	"7"	"78"	"2609797.73999023"	"HCD"	"MS2"	"17.61022"	"201.5"	"100.000"	"33.4180"	"8602"	"8602"	"8583"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"365.0"	""	"213.0"	""	"217.5"	""	"349.2"	""	"386.8"	"378.1"	""	"805"	"47"	"36.000"	"29.000"	"0.000719061248877951"	"27"	"0"	"0.003435"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENTQTTIK"	"[R].eNTQTTIk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"696.90869"	"1392.81011"	"1392.80987"	"0.17"	"0.00012"	"12/78"	"12"	"78"	"845934.360351563"	"HCD"	"MS2"	"0"	"74.5"	"100.000"	"33.7168"	"8716"	"8716"	"8693"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"118.0"	""	"78.6"	""	"92.2"	""	"118.9"	""	"141.1"	"158.3"	""	"801"	"37"	"36.000"	"29.000"	"0.00817716046840146"	"23"	"0.0001301"	"0.003921"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEITEWESR"	"[K].dEITEWESR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"697.34235"	"1393.67742"	"1393.67969"	"-1.63"	"-0.00114"	"7/78"	"7"	"78"	"524797.924865723"	"HCD"	"MS2"	"26.19226"	"34.6"	"100.000"	"64.5405"	"21223"	"21223"	"21199"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.2"	""	"38.0"	""	"41.4"	""	"61.9"	"1.6"	"70.5"	"67.9"	""	"491"	"46"	"33.000"	"26.000"	"0.000568920386567261"	"26"	"0"	"0.00258"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEITEWESR"	"[K].dEITEWESR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"697.34283"	"1393.67839"	"1393.67969"	"-0.93"	"-0.00065"	"7/78"	"7"	"78"	"430412.455871582"	"HCD"	"MS2"	"21.15962"	"30.4"	"100.000"	"64.5994"	"21233"	"21233"	"21207"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.4"	""	"32.4"	""	"36.4"	""	"53.2"	""	"64.0"	"57.7"	""	"499"	"46"	"33.000"	"26.000"	"0.000629608452733903"	"26"	"0"	"0.001046"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAVMPDGQFK"	"[K].ATAVMPDGQFk.[D]"	"K11(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"697.37109"	"1393.73491"	"1393.73470"	"0.15"	"0.00010"	"6/94"	"6"	"94"	"467830.27935791"	"HCD"	"MS2"	"22.62272"	"34.1"	"100.000"	"55.2831"	"17490"	"17490"	"17463"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.1"	""	"37.0"	""	"45.4"	""	"63.8"	""	"73.0"	"68.0"	""	"818"	"34"	"36.000"	"29.000"	"0.0155497463095109"	"24"	"0.001465"	"0.0184"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDFVELGVTR"	"[K].eDFVELGVTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"697.37885"	"1393.75041"	"1393.75246"	"-1.47"	"-0.00102"	"7/88"	"7"	"88"	"219154.312866211"	"HCD"	"MS2"	"24.09066"	"13.3"	"100.000"	"81.3059"	"28010"	"28010"	"27985"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.2"	""	"12.1"	""	"15.1"	""	"32.6"	""	"25.0"	"26.8"	""	"887"	"24"	"36.000"	"29.000"	"0.184456355754099"	"17"	"0.0001301"	"0.004168"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITVPDTYEAR"	"[R].iTVPDTYEAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"697.37891"	"1393.75054"	"1393.75246"	"-1.38"	"-0.00096"	"7/84"	"7"	"84"	"537116.121582031"	"HCD"	"MS2"	"51.22375"	"33.5"	"100.000"	"64.8339"	"21339"	"21339"	"21310"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.6"	""	"38.4"	""	"41.3"	""	"60.3"	""	"71.6"	"62.8"	""	"891"	"25"	"36.000"	"29.000"	"0.153761535874124"	"21"	"0.003507"	"0.03623"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDFVELGVTR"	"[K].eDFVELGVTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"697.37976"	"1393.75224"	"1393.75246"	"-0.15"	"-0.00011"	"5/88"	"5"	"88"	"212837.539550781"	"HCD"	"MS2"	"18.52506"	"13.4"	"100.000"	"81.2175"	"27973"	"27973"	"27953"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.9"	""	"14.7"	""	"14.3"	""	"24.8"	""	"30.4"	"26.1"	""	"898"	"28"	"36.000"	"29.000"	"0.0743440713597818"	"26"	"0.000936"	"0.01277"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITVPDTYEAR"	"[R].iTVPDTYEAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"697.37988"	"1393.75249"	"1393.75246"	"0.02"	"0.00001"	"7/84"	"7"	"84"	"534586.884460449"	"HCD"	"MS2"	"40.93513"	"33.6"	"100.000"	"64.8866"	"21345"	"21345"	"21319"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.6"	""	"39.4"	""	"38.8"	""	"56.3"	"0.5"	"70.9"	"66.0"	""	"898"	"21"	"36.000"	"29.000"	"0.364121514976375"	"20"	"0.004022"	"0.04288"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAYEAELGDAR"	"[K].aAYEAELGDAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"697.85828"	"1394.70928"	"1394.71132"	"-1.47"	"-0.00102"	"9/90"	"9"	"90"	"1449131.70220947"	"HCD"	"MS2"	"7.390034"	"75.6"	"100.000"	"50.7504"	"15643"	"15643"	"15620"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.4"	""	"77.5"	""	"61.7"	""	"132.0"	""	"184.6"	"206.5"	""	"715"	"29"	"35.000"	"28.000"	"0.0483365941341954"	"28"	"0"	"0.0002008"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAYEAELGDAR"	"[K].aAYEAELGDAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.8393"	"0.0000"	"1"	"1"	"1"	"697.85883"	"1394.71037"	"1394.71132"	"-0.68"	"-0.00047"	"7/90"	"7"	"90"	"500389.738891602"	"HCD"	"MS2"	"6.319164"	"33.7"	"100.000"	"51.0772"	"15776"	"15776"	"15753"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.1"	""	"30.9"	""	"36.6"	""	"54.3"	"1.0"	"81.3"	"79.6"	""	"708"	"56"	"35.000"	"28.000"	"9.93123507834906E-05"	"24"	"0"	"3.911E-05"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAYEAELGDAR"	"[K].aAYEAELGDAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.7818"	"0.0000"	"1"	"1"	"1"	"697.85889"	"1394.71050"	"1394.71132"	"-0.59"	"-0.00041"	"7/90"	"7"	"90"	"543203.014038086"	"HCD"	"MS2"	"0"	"36.2"	"100.000"	"51.4141"	"15902"	"15902"	"15883"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.9"	""	"44.9"	""	"41.6"	""	"53.8"	""	"73.2"	"87.8"	""	"708"	"55"	"35.000"	"28.000"	"0.000103992797679438"	"28"	"0"	"0.0001268"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAYEAELGDAR"	"[K].aAYEAELGDAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"697.85895"	"1394.71062"	"1394.71132"	"-0.51"	"-0.00035"	"7/90"	"7"	"90"	"1668788.46557617"	"HCD"	"MS2"	"10.17171"	"94.2"	"100.000"	"51.1147"	"15780"	"15780"	"15762"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.7"	""	"88.8"	""	"81.9"	""	"156.3"	"1.2"	"220.8"	"262.5"	""	"708"	"56"	"35.000"	"28.000"	"8.59019973659175E-05"	"22"	"0"	"6.09E-06"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENEIQTYR"	"[R].lENEIQTYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"697.87396"	"1394.74065"	"1394.74771"	"-5.06"	"-0.00353"	"6/86"	"6"	"86"	"724204.25567627"	"HCD"	"MS2"	"0"	"47.9"	"100.000"	"60.0440"	"19405"	"19405"	"19399"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"80.0"	""	"71.1"	""	"73.7"	""	"75.2"	""	"81.3"	"74.3"	""	"816"	"17"	"36.000"	"29.000"	"0.86628374049609"	"22"	"0.004606"	"0.04969"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELYQNLTR"	"[K].eELYQNLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"697.87579"	"1394.74431"	"1394.74771"	"-2.44"	"-0.00170"	"6/86"	"6"	"86"	"389698.878662109"	"HCD"	"MS2"	"0"	"28.3"	"100.000"	"62.3934"	"20350"	"20350"	"20329"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.3"	""	"41.3"	""	"41.4"	""	"42.3"	""	"49.0"	"59.8"	""	"796"	"36"	"35.000"	"29.000"	"0.0103248338612329"	"21"	"0.0008629"	"0.01097"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELYQNLTR"	"[K].eELYQNLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"697.87616"	"1394.74504"	"1394.74771"	"-1.91"	"-0.00133"	"7/86"	"7"	"86"	"516833.778503418"	"HCD"	"MS2"	"0"	"34.1"	"100.000"	"62.0769"	"20223"	"20223"	"20211"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.7"	""	"40.3"	""	"37.0"	""	"40.6"	""	"68.2"	"92.2"	""	"826"	"39"	"36.000"	"29.000"	"0.00534502882518844"	"21"	"0"	"0.0005033"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELYQNLTR"	"[K].eELYQNLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"697.87628"	"1394.74529"	"1394.74771"	"-1.74"	"-0.00121"	"6/86"	"6"	"86"	"428440.326721191"	"HCD"	"MS2"	"0"	"32.0"	"100.000"	"62.4848"	"20371"	"20371"	"20351"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.1"	""	"42.1"	""	"43.7"	""	"42.9"	""	"59.4"	"70.5"	""	"826"	"39"	"36.000"	"29.000"	"0.00571412914515345"	"21"	"0.001374"	"0.01781"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENEIQTYR"	"[R].lENEIQTYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"697.87677"	"1394.74626"	"1394.74771"	"-1.04"	"-0.00072"	"6/86"	"6"	"86"	"313634.657409668"	"HCD"	"MS2"	"0"	"22.3"	"100.000"	"60.6562"	"19647"	"19647"	"19625"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.8"	""	"23.6"	""	"31.9"	""	"38.8"	""	"38.6"	"38.3"	""	"818"	"25"	"36.000"	"29.000"	"0.141163789388365"	"19"	"0.0023"	"0.02307"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENEIQTYR"	"[R].lENEIQTYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"697.87677"	"1394.74626"	"1394.74771"	"-1.04"	"-0.00072"	"6/86"	"6"	"86"	"898997.649414063"	"HCD"	"MS2"	"0"	"49.6"	"100.000"	"60.2622"	"19480"	"19480"	"19467"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"94.5"	""	"63.1"	""	"69.4"	""	"75.6"	"0.9"	"86.3"	"78.8"	""	"818"	"43"	"36.000"	"29.000"	"0.00201708085817569"	"22"	"0"	"0.0005215"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENEIQTYR"	"[R].lENEIQTYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"697.87677"	"1394.74626"	"1394.74771"	"-1.04"	"-0.00072"	"8/86"	"8"	"86"	"1806282.1350708"	"HCD"	"MS2"	"0"	"96.3"	"100.000"	"60.3351"	"19518"	"19518"	"19505"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"183.5"	"2.8"	"129.0"	""	"136.5"	""	"160.7"	""	"151.2"	"151.9"	""	"818"	"23"	"36.000"	"29.000"	"0.215141061953799"	"17"	"0"	"0.003664"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELYQNLTR"	"[K].eELYQNLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"697.87726"	"1394.74724"	"1394.74771"	"-0.34"	"-0.00023"	"6/86"	"6"	"86"	"429865.515197754"	"HCD"	"MS2"	"0"	"30.4"	"100.000"	"62.1662"	"20244"	"20244"	"20233"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.8"	""	"39.6"	""	"34.8"	""	"39.3"	""	"58.3"	"80.7"	""	"818"	"37"	"36.000"	"29.000"	"0.00856491994443015"	"20"	"0"	"0.00119"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENEIQTYR"	"[R].lENEIQTYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"697.87762"	"1394.74797"	"1394.74771"	"0.19"	"0.00013"	"6/86"	"6"	"86"	"2030803.42907715"	"HCD"	"MS2"	"0"	"100.7"	"100.000"	"60.5647"	"19596"	"19596"	"19581"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"216.0"	""	"133.5"	""	"151.8"	""	"151.6"	""	"150.8"	"151.8"	""	"818"	"43"	"36.000"	"29.000"	"0.00198026498341897"	"22"	"0"	"0.0009794"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMDEVVK"	"[K].sLmDEVVk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"697.90125"	"1394.79521"	"1394.79652"	"-0.94"	"-0.00066"	"7/64"	"7"	"64"	"2012536.83404541"	"HCD"	"MS2"	"38.52783"	"126.2"	"100.000"	"56.4785"	"17977"	"17977"	"17958"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"144.0"	""	"139.1"	""	"145.5"	""	"366.5"	""	"196.3"	"204.1"	""	"794"	"28"	"35.000"	"28.000"	"0.0613466012496751"	"19"	"0.001374"	"0.0176"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMDEVVK"	"[K].sLmDEVVk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"697.90137"	"1394.79546"	"1394.79652"	"-0.76"	"-0.00053"	"7/64"	"7"	"64"	"2683708.91680908"	"HCD"	"MS2"	"4.787758"	"156.1"	"100.000"	"57.7637"	"18486"	"18486"	"18466"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"181.1"	""	"167.1"	""	"179.8"	""	"440.3"	""	"241.9"	"268.7"	""	"794"	"28"	"35.000"	"28.000"	"0.0595374879694443"	"16"	"0.003653"	"0.03751"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMDEVVK"	"[K].sLmDEVVk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"697.90149"	"1394.79570"	"1394.79652"	"-0.59"	"-0.00041"	"7/64"	"7"	"64"	"2796747.90527344"	"HCD"	"MS2"	"2.866912"	"165.7"	"100.000"	"57.5724"	"18423"	"18423"	"18408"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"194.6"	""	"177.1"	""	"182.7"	""	"467.9"	""	"258.4"	"287.9"	""	"793"	"28"	"35.000"	"28.000"	"0.0586466475908694"	"16"	"0.00263"	"0.02572"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDNFFPER"	"[R].eIDNFFPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIS1"	"Protein phosphatase Slingshot homolog 3 OS=Rattus norvegicus OX=10116 GN=Ssh3 PE=1 SV=1"	"Q5XIS1"	"Protein phosphatase Slingshot homolog 3 OS=Rattus norvegicus OX=10116 GN=Ssh3 PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"698.35834"	"1395.70940"	"1395.71060"	"-0.86"	"-0.00060"	"8/88"	"8"	"88"	"317136.558837891"	"HCD"	"MS2"	"28.81955"	"19.5"	"100.000"	"87.0415"	"30270"	"30270"	"30260"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.7"	""	"24.4"	""	"31.5"	""	"26.0"	""	"34.3"	"35.1"	""	"718"	"33"	"35.000"	"28.000"	"0.018971184538729"	"23"	"0.0001301"	"0.003946"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDNFFPER"	"[R].eIDNFFPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIS1"	"Protein phosphatase Slingshot homolog 3 OS=Rattus norvegicus OX=10116 GN=Ssh3 PE=1 SV=1"	"Q5XIS1"	"Protein phosphatase Slingshot homolog 3 OS=Rattus norvegicus OX=10116 GN=Ssh3 PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"698.35883"	"1395.71037"	"1395.71060"	"-0.16"	"-0.00011"	"6/88"	"6"	"88"	"298367.07019043"	"HCD"	"MS2"	"35.13133"	"16.3"	"100.000"	"87.0828"	"30292"	"30292"	"30270"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.2"	""	"23.4"	""	"23.5"	""	"22.8"	""	"27.2"	"28.5"	""	"731"	"41"	"35.000"	"28.000"	"0.00304009658338026"	"22"	"0.0003538"	"0.006534"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDNFFPER"	"[R].eIDNFFPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIS1"	"Protein phosphatase Slingshot homolog 3 OS=Rattus norvegicus OX=10116 GN=Ssh3 PE=1 SV=1"	"Q5XIS1"	"Protein phosphatase Slingshot homolog 3 OS=Rattus norvegicus OX=10116 GN=Ssh3 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"698.35895"	"1395.71062"	"1395.71060"	"0.02"	"0.00001"	"7/88"	"7"	"88"	"285636.029846191"	"HCD"	"MS2"	"48.07886"	"13.5"	"100.000"	"86.7890"	"30174"	"30174"	"30158"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.8"	""	"16.9"	""	"22.2"	""	"19.5"	""	"24.7"	"24.6"	""	"731"	"22"	"35.000"	"28.000"	"0.215222356032468"	"18"	"0.008437"	"0.1018"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGGSGSQVDSAR"	"[R].fGGSGSQVDSAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"698.85364"	"1396.70000"	"1396.70182"	"-1.31"	"-0.00091"	"11/110"	"11"	"110"	"1983655.19189453"	"HCD"	"MS2"	"0"	"113.5"	"100.000"	"34.3961"	"8995"	"8995"	"8967"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"192.5"	""	"134.7"	""	"151.5"	""	"189.1"	""	"201.4"	"205.5"	""	"658"	"70"	"35.000"	"28.000"	"2.94575007865816E-06"	"21"	"0"	"1.991E-07"	"1.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGGSGSQVDSAR"	"[R].fGGSGSQVDSAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9571"	"0.0000"	"1"	"1"	"1"	"698.85406"	"1396.70085"	"1396.70182"	"-0.69"	"-0.00048"	"11/110"	"11"	"110"	"1685091.3793335"	"HCD"	"MS2"	"6.350364"	"88.4"	"100.000"	"34.4480"	"9010"	"9010"	"8983"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"165.4"	""	"109.8"	""	"113.4"	""	"140.9"	""	"145.9"	"161.7"	""	"653"	"70"	"35.000"	"28.000"	"3.41887470938619E-06"	"20"	"0"	"1.714E-07"	"1.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGGSGSQVDSAR"	"[R].fGGSGSQVDSAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"698.85461"	"1396.70195"	"1396.70182"	"0.09"	"0.00006"	"5/110"	"5"	"110"	"174110.175842285"	"HCD"	"MS2"	"0"	"17.2"	"100.000"	"34.7769"	"9144"	"9144"	"9119"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.9"	""	"19.8"	""	"23.5"	""	"26.2"	""	"40.3"	"30.3"	""	"664"	"9"	"35.000"	"28.000"	"4.05637487174738"	"13"	"0.009417"	"0.1235"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEMPVDK"	"[K].yGEMPVDk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"698.87982"	"1396.75237"	"1396.75466"	"-1.64"	"-0.00115"	"5/64"	"5"	"64"	"463592.031494141"	"HCD"	"MS2"	"0"	"43.5"	"100.000"	"59.6679"	"19264"	"19264"	"19238"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.4"	""	"52.2"	""	"60.4"	""	"51.2"	""	"91.4"	"101.3"	""	"757"	"31"	"35.000"	"28.000"	"0.0286461250765439"	"25"	"0.00918"	"0.1198"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEMPVDK"	"[K].yGEMPVDk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"698.88068"	"1396.75408"	"1396.75466"	"-0.42"	"-0.00029"	"7/64"	"7"	"64"	"1891441.01757813"	"HCD"	"MS2"	"0"	"158.9"	"100.000"	"59.3385"	"19129"	"19129"	"19110"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"263.3"	""	"237.8"	""	"219.3"	""	"151.9"	""	"294.5"	"339.7"	""	"766"	"42"	"35.000"	"28.000"	"0.00217369583871474"	"28"	"0"	"0.00301"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEMPVDK"	"[K].yGEMPVDk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"698.88092"	"1396.75456"	"1396.75466"	"-0.07"	"-0.00005"	"7/64"	"7"	"64"	"2407226.17999268"	"HCD"	"MS2"	"0"	"184.0"	"100.000"	"59.1202"	"19055"	"19055"	"19037"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"300.5"	""	"257.4"	""	"246.4"	""	"186.5"	""	"348.9"	"405.8"	""	"768"	"43"	"35.000"	"28.000"	"0.00210538354529608"	"28"	"0"	"0.003653"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDYDVVK"	"[K].aEDYDVVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"2"	"2"	"0.4200"	"0.0000"	"1"	"1"	"1"	"698.88971"	"1396.77214"	"1396.77242"	"-0.20"	"-0.00014"	"14/62"	"14"	"62"	"1295216.3269043"	"HCD"	"MS2"	"0"	"113.9"	"100.000"	"56.3333"	"17904"	"17904"	"17883"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"204.6"	""	"140.5"	""	"148.0"	""	"176.4"	""	"197.7"	"212.3"	""	"763"	"50"	"35.000"	"28.000"	"0.000385917561800151"	""	"0"	"0.001598"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDYDVVK"	"[K].aEDYDVVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"698.88983"	"1396.77239"	"1396.77242"	"-0.02"	"-0.00002"	"14/62"	"14"	"62"	"1302741.88818359"	"HCD"	"MS2"	"0"	"111.8"	"100.000"	"56.1449"	"17841"	"17841"	"17821"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"190.3"	""	"128.9"	""	"138.0"	""	"176.1"	"2.2"	"214.6"	"209.0"	""	"761"	"46"	"35.000"	"28.000"	"0.001005436532161"	""	"0"	"0.001921"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYVDPSTDER"	"[R].sYVDPSTDER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"699.34021"	"1397.67314"	"1397.67460"	"-1.05"	"-0.00073"	"9/88"	"9"	"88"	"422610.807556152"	"HCD"	"MS2"	"0"	"24.2"	"100.000"	"36.4391"	"9818"	"9818"	"9792"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.1"	""	"31.6"	""	"36.2"	""	"28.6"	"0.6"	"37.8"	"39.6"	""	"485"	"25"	"33.000"	"26.000"	"0.0782909824515314"	"17"	"0.001812"	"0.02072"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYVDPSTDER"	"[R].sYVDPSTDER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"699.34082"	"1397.67436"	"1397.67460"	"-0.17"	"-0.00012"	"5/88"	"5"	"88"	"459772.663513184"	"HCD"	"MS2"	"0"	"25.1"	"100.000"	"36.2727"	"9757"	"9757"	"9731"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.7"	""	"37.3"	""	"33.9"	""	"32.2"	""	"36.6"	"44.6"	""	"494"	"23"	"33.000"	"26.000"	"0.136992551100604"	"16"	"0.001211"	"0.01531"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGIHEDSQNR"	"[K].lGIHEDSQNR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"699.36938"	"1397.73149"	"1397.73346"	"-1.41"	"-0.00098"	"6/80"	"6"	"80"	"438185.277038574"	"HCD"	"MS2"	"100"	"28.2"	"100.000"	"26.9433"	"5978"	"5978"	"5958"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.9"	""	"25.7"	""	"27.0"	""	"46.7"	"1.3"	"62.2"	"57.2"	""	"723"	"24"	"35.000"	"28.000"	"0.156714182537092"	"14"	"0"	"0.002487"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGIHEDSQNR"	"[K].lGIHEDSQNR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"699.37006"	"1397.73284"	"1397.73346"	"-0.44"	"-0.00031"	"6/80"	"6"	"80"	"501206.860412598"	"HCD"	"MS2"	"0"	"30.2"	"100.000"	"27.0149"	"5991"	"5991"	"5968"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.0"	""	"35.0"	""	"34.7"	""	"51.4"	"0.1"	"58.4"	"56.9"	""	"710"	"36"	"35.000"	"28.000"	"0.00957697498517947"	"19"	"0"	"0.001698"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYEEGSNK"	"[K].lYEEGSNk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"3"	"3"	"0.5357"	"0.0000"	"1"	"1"	"1"	"466.59381"	"1397.76688"	"1397.76767"	"-0.56"	"-0.00026"	"9/64"	"9"	"64"	"819126.018066406"	"HCD"	"MS2"	"54.8526"	"43.5"	"100.000"	"44.0438"	"12905"	"12905"	"12875"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.4"	""	"51.6"	""	"49.8"	""	"82.5"	"2.5"	"82.8"	"89.9"	""	"671"	"28"	"35.000"	"28.000"	"0.047609379852669"	"27"	"0.003922"	"0.04028"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYEEGSNK"	"[K].lYEEGSNk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"699.38715"	"1397.76702"	"1397.76767"	"-0.47"	"-0.00033"	"7/64"	"7"	"64"	"907736.538879395"	"HCD"	"MS2"	"14.28904"	"82.0"	"100.000"	"44.0002"	"12887"	"12887"	"12865"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"101.9"	""	"80.2"	""	"91.3"	""	"155.6"	""	"175.9"	"174.5"	""	"692"	"31"	"35.000"	"28.000"	"0.0266119132339167"	"22"	"0"	"0.003771"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYEEGSNK"	"[K].lYEEGSNk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"699.38739"	"1397.76750"	"1397.76767"	"-0.12"	"-0.00008"	"7/64"	"7"	"64"	"964234.247436523"	"HCD"	"MS2"	"0"	"84.1"	"100.000"	"43.8756"	"12847"	"12847"	"12825"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.8"	""	"86.8"	""	"95.1"	""	"144.6"	""	"190.0"	"175.3"	""	"706"	"28"	"35.000"	"28.000"	"0.0573818710779921"	"22"	"0.0002479"	"0.005433"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLNDDVVK"	"[K].hLNDDVVk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.4324"	"0.0000"	"1"	"1"	"1"	"466.60950"	"1397.81394"	"1397.81529"	"-0.96"	"-0.00045"	"12/68"	"12"	"68"	"3182503.80389404"	"HCD"	"MS2"	"28.10194"	"143.6"	"100.000"	"39.3079"	"10988"	"10988"	"10962"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"139.7"	""	"154.9"	""	"148.2"	""	"257.8"	""	"321.6"	"349.2"	""	"539"	"37"	"34.000"	"27.000"	"0.00548982839941691"	""	"0"	"0.001476"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLNDDVVK"	"[K].hLNDDVVk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"699.41071"	"1397.81413"	"1397.81529"	"-0.82"	"-0.00058"	"14/68"	"14"	"68"	"1549009.91113281"	"HCD"	"MS2"	"20.21489"	"118.9"	"100.000"	"38.7466"	"10759"	"10759"	"10736"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"88.3"	""	"104.4"	""	"90.0"	""	"241.9"	"0.3"	"296.4"	"313.2"	""	"539"	"48"	"34.000"	"27.000"	"0.000475947192674921"	""	"0"	"0.001957"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLNDDVVK"	"[K].hLNDDVVk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.4211"	"0.0000"	"1"	"1"	"1"	"466.60965"	"1397.81440"	"1397.81529"	"-0.64"	"-0.00030"	"10/68"	"10"	"68"	"51563768.9743652"	"HCD"	"MS2"	"6.209709"	"262.3"	"15.699"	"38.9905"	"10859"	"10859"	"10844"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"196.3"	""	"198.5"	""	"185.1"	""	"514.0"	""	"654.8"	"764.7"	""	"525"	"38"	"34.000"	"27.000"	"0.00396396040468089"	""	"0"	"0.00231"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLNDDVVK"	"[K].hLNDDVVk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.3158"	"0.0000"	"1"	"1"	"1"	"466.60971"	"1397.81458"	"1397.81529"	"-0.51"	"-0.00024"	"12/68"	"12"	"68"	"27956265.826416"	"HCD"	"MS2"	"30.88895"	"740.7"	"78.302"	"38.6915"	"10737"	"10737"	"10720"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"579.9"	""	"615.2"	""	"561.9"	""	"1551.3"	""	"1859.1"	"1904.1"	""	"525"	"38"	"34.000"	"27.000"	"0.00451990500933827"	""	"0"	"0.001507"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLNDDVVK"	"[K].hLNDDVVk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.3611"	"0.0000"	"1"	"1"	"1"	"466.60977"	"1397.81476"	"1397.81529"	"-0.37"	"-0.00017"	"11/68"	"11"	"68"	"3449709.49755859"	"HCD"	"MS2"	"31.32844"	"157.0"	"100.000"	"39.5018"	"11057"	"11057"	"11038"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"147.1"	""	"162.2"	""	"146.6"	""	"299.5"	""	"359.9"	"381.2"	""	"547"	"36"	"34.000"	"27.000"	"0.00767286099979794"	""	"0"	"0.0008385"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLNDDVVK"	"[K].hLNDDVVk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.2571"	"0.0000"	"1"	"1"	"1"	"466.60983"	"1397.81495"	"1397.81529"	"-0.24"	"-0.00011"	"12/68"	"12"	"68"	"18970667.5527344"	"HCD"	"MS2"	"48.33192"	"654.4"	"100.000"	"38.8926"	"10809"	"10809"	"10789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"555.2"	""	"587.4"	""	"495.7"	""	"1374.1"	""	"1599.9"	"1636.1"	""	"547"	"35"	"34.000"	"27.000"	"0.00849097047353106"	""	"0"	"0.0009061"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLNDDVVK"	"[K].hLNDDVVk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.4054"	"0.0000"	"1"	"1"	"1"	"466.61011"	"1397.81577"	"1397.81529"	"0.35"	"0.00016"	"12/68"	"12"	"68"	"61707393.5976563"	"HCD"	"MS2"	"4.410878"	"279.4"	"13.795"	"39.1913"	"10932"	"10932"	"10915"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"188.8"	""	"216.9"	""	"206.9"	""	"542.7"	""	"723.4"	"793.5"	""	"534"	"37"	"34.000"	"27.000"	"0.00592258444086659"	""	"0"	"0.003296"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLNDDVVK"	"[K].hLNDDVVk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"699.41223"	"1397.81719"	"1397.81529"	"1.36"	"0.00095"	"14/68"	"14"	"68"	"1415041.80023193"	"HCD"	"MS2"	"0"	"114.2"	"100.000"	"38.9821"	"10846"	"10846"	"10821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"81.2"	""	"100.8"	""	"77.8"	""	"246.1"	""	"274.9"	"311.1"	""	"531"	"46"	"34.000"	"27.000"	"0.000746559670470919"	""	"0"	"0.00207"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTESTSFLEK"	"[K].QTESTSFLEk.[K]"	"K10(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"2"	"2"	"0.6600"	"0.0000"	"1"	"1"	"1"	"699.86871"	"1398.73015"	"1398.73139"	"-0.89"	"-0.00062"	"6/104"	"6"	"104"	"283035.820800781"	"HCD"	"MS2"	"0"	"11.0"	"100.000"	"80.8768"	"27837"	"27837"	"27813"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.4"	""	"12.2"	""	"18.0"	""	"18.3"	""	"18.9"	"22.7"	""	"676"	"50"	"35.000"	"28.000"	"0.00036890683371968"	""	"0.006958"	"0.08108"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLNDDVVK"	"[K].hLnDDVVk.[I]"	"N-Term(TMT6plex); N3(Deamidated); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"466.93735"	"1398.79749"	"1398.79930"	"-1.30"	"-0.00060"	"6/68"	"6"	"68"	"1952588.23266602"	"HCD"	"MS2"	"47.3961"	"76.9"	"100.000"	"43.3692"	"12643"	"12643"	"12623"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"73.3"	""	"78.5"	""	"83.2"	""	"145.3"	"0.1"	"161.6"	"190.0"	""	"654"	"14"	"35.000"	"28.000"	"1.36630529893445"	"16"	"0.0008629"	"0.01029"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLNDDVVK"	"[K].hLnDDVVk.[I]"	"N-Term(TMT6plex); N3(Deamidated); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"466.93738"	"1398.79758"	"1398.79930"	"-1.23"	"-0.00057"	"9/68"	"9"	"68"	"7244042.71002197"	"HCD"	"MS2"	"42.54983"	"301.4"	"100.000"	"43.1904"	"12559"	"12559"	"12540"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"316.0"	""	"332.3"	""	"306.2"	""	"522.2"	"1.1"	"691.7"	"699.5"	""	"654"	"30"	"35.000"	"28.000"	"0.0358548370138821"	"15"	"0"	"0.003308"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDEEVHK"	"[K].aLDEEVHk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P82808"	"Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Rattus norvegicus OX=10116 GN=Gfpt1 PE=1 SV=3"	"P82808"	"Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Rattus norvegicus OX=10116 GN=Gfpt1 PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"466.93744"	"1398.79776"	"1398.79930"	"-1.10"	"-0.00051"	"6/60"	"6"	"60"	"4403848.215271"	"HCD"	"MS2"	"43.3962"	"160.7"	"100.000"	"41.4973"	"11878"	"11878"	"11860"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"206.6"	""	"174.7"	""	"226.2"	""	"263.9"	""	"311.3"	"346.1"	""	"653"	"28"	"35.000"	"28.000"	"0.0494177747614422"	"22"	"0.001635"	"0.01975"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDEEVHK"	"[K].aLDEEVHk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P82808"	"Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Rattus norvegicus OX=10116 GN=Gfpt1 PE=1 SV=3"	"P82808"	"Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Rattus norvegicus OX=10116 GN=Gfpt1 PE=1 SV=3"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"466.93753"	"1398.79804"	"1398.79930"	"-0.90"	"-0.00042"	"6/60"	"6"	"60"	"4380646.7276001"	"HCD"	"MS2"	"39.63655"	"159.7"	"100.000"	"41.6798"	"11942"	"11942"	"11926"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"198.7"	""	"164.3"	""	"216.6"	""	"270.9"	""	"349.3"	"321.4"	""	"636"	"23"	"35.000"	"28.000"	"0.145689119975222"	"20"	"0.003449"	"0.03455"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLNDDVVK"	"[K].hLnDDVVk.[I]"	"N-Term(TMT6plex); N3(Deamidated); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"466.93771"	"1398.79859"	"1398.79930"	"-0.51"	"-0.00024"	"9/68"	"9"	"68"	"7175800.96472168"	"HCD"	"MS2"	"42.67191"	"291.6"	"100.000"	"43.0683"	"12520"	"12520"	"12499"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"315.4"	""	"298.0"	""	"302.8"	""	"529.0"	""	"680.0"	"652.7"	""	"624"	"26"	"34.000"	"27.000"	"0.0751890493750217"	"14"	"0"	"0.002322"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AETPGPQIK"	"[K].aETPGPQIk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"699.92084"	"1398.83440"	"1398.83569"	"-0.92"	"-0.00064"	"7/70"	"7"	"70"	"560904.20690918"	"HCD"	"MS2"	"0"	"46.2"	"100.000"	"45.8942"	"13665"	"13665"	"13642"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.7"	""	"54.1"	""	"65.1"	""	"79.1"	""	"84.6"	"96.5"	""	"462"	"33"	"33.000"	"26.000"	"0.0108545539087805"	"23"	"0.0006732"	"0.008372"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AETPGPQIK"	"[K].aETPGPQIk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"699.92163"	"1398.83599"	"1398.83569"	"0.21"	"0.00015"	"7/70"	"7"	"70"	"557746.291870117"	"HCD"	"MS2"	"7.691861"	"47.0"	"100.000"	"46.1312"	"13750"	"13750"	"13725"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.4"	""	"55.2"	""	"66.1"	""	"79.5"	""	"89.1"	"92.9"	""	"476"	"35"	"33.000"	"26.000"	"0.0081203912966019"	"20"	"0.0004639"	"0.007462"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEQIEAGTPGR"	"[K].iEQIEAGTPGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"700.38953"	"1399.77178"	"1399.77426"	"-1.77"	"-0.00124"	"8/108"	"8"	"108"	"814923.550964355"	"HCD"	"MS2"	"0"	"48.8"	"100.000"	"54.9083"	"17337"	"17337"	"17314"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"72.1"	""	"58.4"	""	"63.9"	""	"92.3"	"0.6"	"89.7"	"85.7"	""	"730"	"30"	"35.000"	"28.000"	"0.0383966083945476"	"19"	"0"	"0.0001381"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEQIEAGTPGR"	"[K].iEQIEAGTPGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"700.38989"	"1399.77251"	"1399.77426"	"-1.25"	"-0.00088"	"8/108"	"8"	"108"	"3229589.58709717"	"HCD"	"MS2"	"0"	"136.9"	"100.000"	"54.6014"	"17212"	"17212"	"17193"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"226.1"	""	"188.7"	""	"184.5"	""	"241.0"	"2.5"	"225.2"	"226.4"	""	"724"	"33"	"35.000"	"28.000"	"0.0186083801872838"	"20"	"0"	"0.0006742"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEQIEAGTPGR"	"[K].iEQIEAGTPGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"700.38995"	"1399.77263"	"1399.77426"	"-1.16"	"-0.00081"	"8/108"	"8"	"108"	"1122554.2076416"	"HCD"	"MS2"	"9.71854"	"60.1"	"100.000"	"55.1084"	"17404"	"17404"	"17386"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.9"	""	"63.7"	""	"87.7"	""	"115.7"	""	"107.1"	"119.4"	""	"724"	"30"	"35.000"	"28.000"	"0.039510140179445"	"17"	"0"	"8.167E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEQIEAGTPGR"	"[K].iEQIEAGTPGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"700.39001"	"1399.77275"	"1399.77426"	"-1.08"	"-0.00075"	"8/108"	"8"	"108"	"2474407.22094727"	"HCD"	"MS2"	"0"	"107.9"	"100.000"	"54.8149"	"17286"	"17286"	"17264"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"177.4"	""	"126.2"	""	"148.6"	""	"225.7"	""	"168.4"	"173.3"	""	"734"	"32"	"35.000"	"28.000"	"0.0246982432856345"	"21"	"0"	"0.0002144"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPDASPEPK"	"[K].tPDASPEPk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"700.39417"	"1399.78105"	"1399.78332"	"-1.62"	"-0.00113"	"7/76"	"7"	"76"	"2997013.60656738"	"HCD"	"MS2"	"0"	"173.6"	"100.000"	"35.1500"	"9301"	"9301"	"9274"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"253.8"	""	"241.2"	""	"245.9"	""	"289.5"	""	"305.9"	"311.6"	""	"745"	"40"	"35.000"	"28.000"	"0.00386479334892209"	"21"	"0.0003538"	"0.006516"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPDASPEPK"	"[K].tPDASPEPk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"700.39471"	"1399.78215"	"1399.78332"	"-0.83"	"-0.00058"	"7/76"	"7"	"76"	"574137.113647461"	"HCD"	"MS2"	"0"	"38.8"	"100.000"	"35.4652"	"9429"	"9429"	"9411"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.5"	""	"55.4"	""	"53.6"	""	"61.0"	""	"71.8"	"76.2"	""	"714"	"38"	"35.000"	"28.000"	"0.00531701904742796"	"19"	"0.001374"	"0.01671"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPDASPEPK"	"[K].tPDASPEPk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"700.39520"	"1399.78313"	"1399.78332"	"-0.13"	"-0.00009"	"5/76"	"5"	"76"	"844364.690917969"	"HCD"	"MS2"	"0"	"53.8"	"100.000"	"35.5585"	"9462"	"9462"	"9442"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"70.9"	""	"73.1"	""	"69.3"	""	"90.6"	""	"110.3"	"99.9"	""	"736"	"34"	"35.000"	"28.000"	"0.0130872325233386"	"22"	"0.001546"	"0.01854"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPDASPEPK"	"[K].tPDASPEPk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"700.39563"	"1399.78398"	"1399.78332"	"0.48"	"0.00033"	"8/76"	"8"	"76"	"1439359.28692627"	"HCD"	"MS2"	"23.70675"	"86.9"	"100.000"	"35.2342"	"9330"	"9330"	"9301"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"121.5"	""	"114.9"	""	"124.4"	""	"146.8"	"0.1"	"160.8"	"154.8"	""	"738"	"40"	"35.000"	"28.000"	"0.00401815204440037"	"22"	"0.001211"	"0.01453"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGGQILIADLR"	"[R].nGGQILIADLR.[G]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"700.40851"	"1399.80974"	"1399.81064"	"-0.65"	"-0.00045"	"6/100"	"6"	"100"	"160182.702697754"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"87.1895"	"30334"	"30334"	"30321"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.6"	""	"9.1"	""	"12.9"	""	"15.2"	""	"18.7"	"16.8"	""	"674"	"32"	"35.000"	"28.000"	"0.0200738142369277"	"26"	"0.008052"	"0.09812"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGGQILIADLR"	"[R].nGGQILIADLR.[G]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"700.40887"	"1399.81047"	"1399.81064"	"-0.12"	"-0.00009"	"5/100"	"5"	"100"	"157660.308288574"	"HCD"	"MS2"	"24.94296"	"8.2"	"100.000"	"87.1691"	"30319"	"30319"	"30307"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.0"	""	"9.9"	""	"11.5"	""	"14.0"	""	"18.5"	"15.7"	""	"681"	"29"	"35.000"	"28.000"	"0.0396384913014273"	"27"	"0.0002479"	"0.005337"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WQDIQNDPR"	"[R].wQDIQNDPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZD32"	"Chromodomain-helicase-DNA-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Chd5 PE=1 SV=1"	"D3ZD32"	"Chromodomain-helicase-DNA-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Chd5 PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"700.85913"	"1400.71099"	"1400.71199"	"-0.72"	"-0.00050"	"7/86"	"7"	"86"	"402681.984130859"	"HCD"	"MS2"	"23.95091"	"24.5"	"100.000"	"53.6757"	"16837"	"16837"	"16812"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.2"	""	"28.9"	""	"39.7"	""	"35.0"	""	"49.6"	"46.6"	""	"598"	"62"	"34.000"	"27.000"	"1.90840782370974E-05"	"26"	"0"	"0.0006304"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WQDIQNDPR"	"[R].wQDIQNDPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZD32"	"Chromodomain-helicase-DNA-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Chd5 PE=1 SV=1"	"D3ZD32"	"Chromodomain-helicase-DNA-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Chd5 PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"700.85919"	"1400.71111"	"1400.71199"	"-0.63"	"-0.00044"	"7/86"	"7"	"86"	"383906.075805664"	"HCD"	"MS2"	"33.4734"	"22.8"	"100.000"	"53.8832"	"16911"	"16911"	"16880"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.8"	""	"23.9"	""	"23.6"	""	"34.9"	"0.2"	"45.1"	"43.6"	""	"597"	"62"	"34.000"	"27.000"	"1.9495946996527E-05"	"26"	"0"	"0.0007464"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEDPDLNVR"	"[K].tLEDPDLNVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.4167"	"0.0000"	"1"	"1"	"1"	"467.59027"	"1400.75626"	"1400.75827"	"-1.44"	"-0.00067"	"11/86"	"11"	"86"	"1089241.09265137"	"HCD"	"MS2"	"54.1527"	"24.8"	"100.000"	"63.4019"	"20760"	"20760"	"20731"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.9"	""	"34.3"	""	"38.2"	""	"42.7"	""	"37.6"	"45.3"	""	"729"	"24"	"35.000"	"28.000"	"0.148490111259599"	"28"	"0.0001301"	"0.005009"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEDPDLNVR"	"[K].tLEDPDLNVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"467.59058"	"1400.75718"	"1400.75827"	"-0.78"	"-0.00037"	"9/86"	"9"	"86"	"825915.831726074"	"HCD"	"MS2"	"26.98241"	"26.9"	"100.000"	"63.4403"	"20761"	"20761"	"20731"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.4"	""	"37.1"	""	"41.5"	""	"48.3"	"1.2"	"48.3"	"46.2"	""	"752"	"19"	"35.000"	"28.000"	"0.483267784138799"	"18"	"0.001374"	"0.0164"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEDPDLNVR"	"[K].tLEDPDLNVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"700.88263"	"1400.75798"	"1400.75827"	"-0.21"	"-0.00015"	"7/86"	"7"	"86"	"1805612.12957764"	"HCD"	"MS2"	"0"	"87.4"	"100.000"	"63.1370"	"20652"	"20652"	"20634"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"141.0"	""	"113.6"	""	"124.7"	""	"133.5"	""	"156.5"	"163.6"	""	"768"	"48"	"35.000"	"28.000"	"0.00061991368582137"	"24"	"0.0001301"	"0.003837"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEDPDLNVR"	"[K].tLEDPDLNVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"700.88269"	"1400.75810"	"1400.75827"	"-0.12"	"-0.00009"	"8/86"	"8"	"86"	"1411127.60601807"	"HCD"	"MS2"	"17.28141"	"76.7"	"100.000"	"63.2376"	"20678"	"20678"	"20657"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"117.3"	""	"101.9"	""	"110.9"	""	"116.8"	"3.2"	"139.7"	"136.6"	""	"768"	"20"	"35.000"	"28.000"	"0.355084098792277"	"21"	"0.003111"	"0.03058"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEDPDLNVR"	"[K].tLEDPDLNVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"700.88367"	"1400.76006"	"1400.75827"	"1.27"	"0.00089"	"7/86"	"7"	"86"	"7645852.03796387"	"HCD"	"MS2"	"48.35673"	"294.3"	"100.000"	"63.5258"	"20796"	"20796"	"20779"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"432.7"	""	"389.2"	""	"408.8"	""	"487.8"	"1.7"	"535.1"	"532.0"	""	"752"	"18"	"35.000"	"28.000"	"0.653413111609765"	"24"	"0"	"0.001291"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTQVDGNSPVR"	"[K].vTQVDGNSPVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"700.88745"	"1400.76763"	"1400.76951"	"-1.34"	"-0.00094"	"8/108"	"8"	"108"	"2902577.83453369"	"HCD"	"MS2"	"0"	"126.7"	"100.000"	"39.0341"	"10876"	"10876"	"10858"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"201.5"	""	"152.2"	""	"180.5"	""	"211.1"	"1.4"	"223.3"	"229.3"	""	"745"	"58"	"35.000"	"28.000"	"5.34719813924237E-05"	"23"	"0"	"4.725E-06"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTQVDGNSPVR"	"[K].vTQVDGNSPVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"700.88824"	"1400.76921"	"1400.76951"	"-0.21"	"-0.00015"	"8/108"	"8"	"108"	"2956079.90386963"	"HCD"	"MS2"	"3.774048"	"122.4"	"100.000"	"39.2601"	"10959"	"10959"	"10940"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"203.5"	""	"129.8"	""	"160.0"	""	"209.3"	""	"229.1"	"229.8"	""	"761"	"58"	"35.000"	"28.000"	"5.399513870027E-05"	"24"	"0"	"2.882E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"467.60248"	"1400.79288"	"1400.79466"	"-1.27"	"-0.00059"	"9/90"	"9"	"90"	"1455258.61730957"	"HCD"	"MS2"	"43.53939"	"26.7"	"100.000"	"63.6201"	"20834"	"20834"	"20811"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.6"	""	"31.8"	""	"39.8"	""	"43.4"	""	"54.2"	"50.2"	""	"758"	"38"	"35.000"	"28.000"	"0.00596539505632697"	"25"	"0.001635"	"0.01977"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"467.60254"	"1400.79306"	"1400.79466"	"-1.14"	"-0.00053"	"10/90"	"10"	"90"	"547399.543701172"	"HCD"	"MS2"	"25.22947"	"17.7"	"100.000"	"63.8950"	"20961"	"20961"	"20933"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.2"	""	"21.0"	""	"22.0"	""	"28.9"	""	"33.2"	"35.6"	""	"756"	"26"	"35.000"	"28.000"	"0.0945130546721251"	"24"	"0.005921"	"0.06907"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"700.90027"	"1400.79326"	"1400.79466"	"-1.00"	"-0.00070"	"9/94"	"9"	"94"	"7093576.4776001"	"HCD"	"MS2"	"3.410578"	"249.1"	"100.000"	"75.5887"	"25706"	"25706"	"25691"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"464.3"	""	"326.6"	""	"377.5"	""	"382.5"	"10.7"	"371.0"	"420.5"	""	"777"	"43"	"35.000"	"28.000"	"0.00181715102390077"	""	"0"	"0.0001611"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"700.90027"	"1400.79326"	"1400.79466"	"-1.00"	"-0.00070"	"7/90"	"7"	"90"	"8165283.8605957"	"HCD"	"MS2"	"46.11343"	"319.3"	"100.000"	"63.4113"	"20764"	"20764"	"20747"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"467.4"	""	"419.3"	""	"418.5"	""	"511.6"	""	"618.8"	"591.3"	""	"777"	"40"	"35.000"	"28.000"	"0.00382288314588201"	"23"	"0"	"0.0002054"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"467.60263"	"1400.79334"	"1400.79466"	"-0.94"	"-0.00044"	"12/90"	"12"	"90"	"1710710.8168335"	"HCD"	"MS2"	"42.0785"	"29.3"	"100.000"	"63.5195"	"20808"	"20808"	"20779"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.0"	""	"42.2"	""	"46.4"	""	"43.6"	""	"56.8"	"49.9"	""	"777"	"48"	"35.000"	"28.000"	"0.000581287552392688"	""	"0"	"0.003604"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"700.90033"	"1400.79338"	"1400.79466"	"-0.91"	"-0.00064"	"7/94"	"7"	"94"	"894876.054382324"	"HCD"	"MS2"	"1.885128"	"39.5"	"100.000"	"76.1584"	"25937"	"25937"	"25924"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.7"	""	"47.2"	""	"60.1"	""	"55.1"	"1.5"	"67.7"	"76.3"	""	"777"	"45"	"35.000"	"28.000"	"0.00131036119413971"	"26"	"0"	"0.0002585"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"700.90033"	"1400.79338"	"1400.79466"	"-0.91"	"-0.00064"	"7/90"	"7"	"90"	"13841876.2071533"	"HCD"	"MS2"	"0"	"265.8"	"55.187"	"63.7109"	"20886"	"20886"	"20872"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"385.8"	""	"346.9"	""	"375.0"	""	"417.5"	"2.7"	"530.7"	"460.3"	""	"777"	"44"	"35.000"	"28.000"	"0.0015289420431457"	"23"	"0"	"0.0002237"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"700.90039"	"1400.79350"	"1400.79466"	"-0.82"	"-0.00058"	"7/90"	"7"	"90"	"9818952.45458984"	"HCD"	"MS2"	"0"	"262.8"	"70.767"	"63.8692"	"20936"	"20936"	"20919"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"359.6"	""	"370.2"	""	"341.8"	""	"417.4"	""	"514.1"	"489.8"	""	"777"	"46"	"35.000"	"28.000"	"0.00107743486065724"	"24"	"0"	"0.0001942"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"467.60272"	"1400.79361"	"1400.79466"	"-0.75"	"-0.00035"	"13/94"	"13"	"94"	"2420718.46429443"	"HCD"	"MS2"	"28.34241"	"36.4"	"100.000"	"75.7686"	"25779"	"25779"	"25763"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.0"	""	"51.9"	""	"51.5"	""	"63.9"	"0.4"	"55.5"	"69.2"	""	"777"	"40"	"35.000"	"28.000"	"0.00347849211416018"	"22"	"0"	"0.000321"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"700.90057"	"1400.79387"	"1400.79466"	"-0.56"	"-0.00039"	"8/90"	"8"	"90"	"1260643.82385254"	"HCD"	"MS2"	"0"	"57.9"	"100.000"	"64.0082"	"21006"	"21006"	"20988"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.2"	""	"66.8"	""	"81.3"	""	"95.6"	"0.9"	"110.8"	"114.7"	""	"771"	"41"	"35.000"	"28.000"	"0.00289084217697662"	"18"	"0"	"0.001012"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"700.90057"	"1400.79387"	"1400.79466"	"-0.56"	"-0.00039"	"7/90"	"7"	"90"	"9146938.65527344"	"HCD"	"MS2"	"32.44357"	"360.3"	"100.000"	"63.5694"	"20813"	"20813"	"20795"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"535.9"	""	"487.4"	""	"482.2"	""	"586.1"	""	"690.3"	"632.9"	""	"771"	"41"	"35.000"	"28.000"	"0.00337306245350177"	"21"	"0"	"0.0001978"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.8378"	"0.0000"	"1"	"1"	"1"	"467.60284"	"1400.79398"	"1400.79466"	"-0.49"	"-0.00023"	"9/94"	"9"	"94"	"1404620.03527832"	"HCD"	"MS2"	"18.83243"	"24.9"	"100.000"	"76.0257"	"25874"	"25874"	"25855"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.6"	""	"27.9"	""	"36.7"	""	"38.8"	""	"52.7"	"47.0"	""	"779"	"37"	"35.000"	"28.000"	"0.00784345595321399"	"21"	"0"	"0.000514"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"700.90063"	"1400.79399"	"1400.79466"	"-0.48"	"-0.00033"	"10/94"	"10"	"94"	"7194539.2666626"	"HCD"	"MS2"	"2.503807"	"248.6"	"100.000"	"75.7120"	"25747"	"25747"	"25730"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"497.2"	""	"303.2"	""	"335.7"	""	"397.2"	"5.8"	"395.9"	"414.1"	""	"780"	"38"	"35.000"	"28.000"	"0.00622392867422325"	"24"	"0"	"0.0002614"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.7903"	"0.0000"	"1"	"1"	"1"	"700.90070"	"1400.79411"	"1400.79466"	"-0.39"	"-0.00027"	"9/94"	"9"	"94"	"9283194.46697998"	"HCD"	"MS2"	"0"	"308.7"	"87.899"	"75.8795"	"25825"	"25825"	"25808"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"514.5"	""	"409.8"	""	"435.5"	""	"440.6"	""	"516.7"	"606.3"	""	"780"	"62"	"35.000"	"28.000"	"2.48350253154087E-05"	""	"0"	"3.841E-06"	"0.993"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"700.90076"	"1400.79424"	"1400.79466"	"-0.30"	"-0.00021"	"8/94"	"8"	"94"	"526214.432922363"	"HCD"	"MS2"	"3.92134"	"24.8"	"100.000"	"76.3211"	"25994"	"25994"	"25976"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.4"	""	"27.4"	""	"33.5"	""	"36.2"	"0.7"	"44.1"	"51.2"	""	"780"	"47"	"35.000"	"28.000"	"0.000753467643636599"	"23"	"0"	"4.106E-05"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"700.90076"	"1400.79424"	"1400.79466"	"-0.30"	"-0.00021"	"7/90"	"7"	"90"	"894702.117797852"	"HCD"	"MS2"	"5.81968"	"42.0"	"100.000"	"64.1684"	"21057"	"21057"	"21043"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.4"	""	"53.1"	""	"52.3"	""	"75.0"	"0.4"	"89.3"	"72.0"	""	"780"	"42"	"35.000"	"28.000"	"0.00240472050725978"	"19"	"0"	"0.0005523"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"700.90088"	"1400.79448"	"1400.79466"	"-0.13"	"-0.00009"	"5/90"	"5"	"90"	"267071.786193848"	"HCD"	"MS2"	"31.30873"	"16.8"	"100.000"	"64.3513"	"21146"	"21146"	"21126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.0"	""	"22.6"	""	"23.7"	""	"28.4"	""	"25.5"	"34.7"	""	"780"	"16"	"35.000"	"28.000"	"0.970654354130132"	"18"	"0.002937"	"0.02755"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"700.90088"	"1400.79448"	"1400.79466"	"-0.13"	"-0.00009"	"8/90"	"8"	"90"	"293615.787353516"	"HCD"	"MS2"	"15.88111"	"17.0"	"100.000"	"64.5232"	"21202"	"21202"	"21177"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.7"	""	"25.6"	""	"20.6"	""	"20.0"	""	"34.5"	"28.5"	""	"780"	"16"	"35.000"	"28.000"	"1.01406222963445"	"17"	"0.002056"	"0.02262"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"467.60309"	"1400.79471"	"1400.79466"	"0.04"	"0.00002"	"9/90"	"9"	"90"	"814969.446350098"	"HCD"	"MS2"	"16.25935"	"25.2"	"100.000"	"63.9244"	"20958"	"20958"	"20935"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.3"	""	"36.3"	""	"36.5"	""	"36.5"	""	"51.6"	"45.0"	""	"778"	"22"	"35.000"	"28.000"	"0.262996277427481"	"22"	"0.002056"	"0.02228"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"700.90100"	"1400.79473"	"1400.79466"	"0.05"	"0.00003"	"9/94"	"9"	"94"	"7508963.57794189"	"HCD"	"MS2"	"0.1768049"	"286.2"	"100.000"	"76.0190"	"25872"	"25872"	"25855"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"481.7"	""	"379.9"	""	"423.8"	""	"406.7"	"0.7"	"481.7"	"533.0"	""	"778"	"62"	"35.000"	"28.000"	"2.47143732490329E-05"	"27"	"0"	"7.932E-06"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLDANDPK"	"[R].aVLDANDPk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5PPL3"	"Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Nsdhl PE=2 SV=1"	"Q5PPL3"	"Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Nsdhl PE=2 SV=1"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"700.91040"	"1400.81352"	"1400.81495"	"-1.02"	"-0.00071"	"5/76"	"5"	"76"	"243778.264892578"	"HCD"	"MS2"	"37.27486"	"22.5"	"100.000"	"51.6744"	"16009"	"16009"	"15979"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.0"	""	"31.6"	""	"26.2"	""	"31.7"	"0.5"	"49.5"	"44.8"	""	"721"	"25"	"35.000"	"28.000"	"0.104690016693443"	"23"	"0.002973"	"0.03023"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAMSDAYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"701.33563"	"1401.66399"	"1401.66702"	"-2.16"	"-0.00151"	"13/80"	"13"	"80"	"770474.036315918"	"HCD"	"MS2"	"38.89568"	"42.9"	"100.000"	"72.0272"	"24268"	"24268"	"24246"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.2"	""	"59.0"	""	"59.4"	""	"54.0"	""	"84.7"	"83.0"	""	"349"	"34"	"32.000"	"25.000"	"0.00742669230918382"	"23"	"0"	"0.0002588"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAMSDAYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"701.33606"	"1401.66484"	"1401.66702"	"-1.55"	"-0.00109"	"14/80"	"14"	"80"	"804662.110046387"	"HCD"	"MS2"	"40.2109"	"47.4"	"100.000"	"72.1464"	"24303"	"24303"	"24282"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.4"	""	"60.4"	""	"71.4"	""	"50.9"	""	"89.0"	"102.8"	""	"353"	"36"	"32.000"	"25.000"	"0.00472873209330559"	"15"	"0"	"0.0001042"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAMSDAYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"701.33679"	"1401.66631"	"1401.66702"	"-0.51"	"-0.00035"	"13/80"	"13"	"80"	"1647346.82733154"	"HCD"	"MS2"	"1.731097"	"67.3"	"100.000"	"72.4459"	"24426"	"24426"	"24409"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"119.1"	""	"88.6"	""	"104.6"	""	"70.0"	""	"117.4"	"142.5"	""	"359"	"49"	"32.000"	"25.000"	"0.000223390372812964"	""	"0"	"4.16E-05"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAMSDAYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.3226"	"0.0000"	"1"	"1"	"1"	"701.33685"	"1401.66643"	"1401.66702"	"-0.42"	"-0.00029"	"6/80"	"6"	"80"	"869262.040771484"	"HCD"	"MS2"	"24.86164"	"28.6"	"100.000"	"72.7527"	"24550"	"24550"	"24530"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.7"	""	"36.5"	""	"38.6"	""	"36.1"	"0.4"	"55.6"	"54.9"	""	"372"	"31"	"32.000"	"25.000"	"0.0162372674520189"	""	"0"	"0.002316"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAMSDAYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"701.33710"	"1401.66692"	"1401.66702"	"-0.07"	"-0.00005"	"13/80"	"13"	"80"	"1662792.47503662"	"HCD"	"MS2"	"0"	"68.4"	"100.000"	"72.3311"	"24392"	"24392"	"24373"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"119.0"	""	"97.3"	""	"92.9"	""	"68.9"	""	"134.8"	"135.9"	""	"370"	"53"	"32.000"	"25.000"	"8.32092731552583E-05"	"24"	"0"	"2.26E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVMQEEFSR"	"[K].fVMQEEFSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"701.35437"	"1401.70146"	"1401.70340"	"-1.38"	"-0.00097"	"6/80"	"6"	"80"	"617584.302307129"	"HCD"	"MS2"	"16.41234"	"35.6"	"100.000"	"79.0527"	"27102"	"27102"	"27083"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"51.1"	""	"53.2"	""	"48.6"	""	"36.5"	"0.1"	"78.7"	"70.1"	""	"588"	"43"	"34.000"	"27.000"	"0.00149743276090815"	"20"	"0"	"0.0004167"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVMQEEFSR"	"[K].fVMQEEFSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"701.35516"	"1401.70305"	"1401.70340"	"-0.25"	"-0.00018"	"6/80"	"6"	"80"	"645816.117797852"	"HCD"	"MS2"	"8.519388"	"41.9"	"100.000"	"79.0756"	"27107"	"27107"	"27096"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.3"	""	"68.7"	""	"62.2"	""	"55.7"	""	"69.5"	"80.8"	""	"590"	"39"	"34.000"	"27.000"	"0.00353852294429066"	"17"	"0"	"0.0004564"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTLDEFGTAR"	"[K].yTLDEFGTAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP9"	"Conserved oligomeric Golgi complex subunit 6 OS=Rattus norvegicus OX=10116 GN=Cog6 PE=2 SV=1"	"Q68FP9"	"Conserved oligomeric Golgi complex subunit 6 OS=Rattus norvegicus OX=10116 GN=Cog6 PE=2 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"701.36328"	"1401.71929"	"1401.72116"	"-1.34"	"-0.00094"	"7/84"	"7"	"84"	"373166.977600098"	"HCD"	"MS2"	"0"	"27.4"	"100.000"	"73.2583"	"24769"	"24769"	"24743"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.8"	""	"41.9"	""	"35.3"	""	"43.8"	"0.0"	"50.0"	"54.5"	""	"667"	"41"	"35.000"	"28.000"	"0.00278032675070648"	"21"	"0"	"0.0006074"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTLDEFGTAR"	"[K].yTLDEFGTAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP9"	"Conserved oligomeric Golgi complex subunit 6 OS=Rattus norvegicus OX=10116 GN=Cog6 PE=2 SV=1"	"Q68FP9"	"Conserved oligomeric Golgi complex subunit 6 OS=Rattus norvegicus OX=10116 GN=Cog6 PE=2 SV=1"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"701.36383"	"1401.72038"	"1401.72116"	"-0.55"	"-0.00039"	"7/84"	"7"	"84"	"362480.185913086"	"HCD"	"MS2"	"0"	"25.2"	"100.000"	"73.4096"	"24817"	"24817"	"24796"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.4"	""	"32.3"	""	"35.6"	""	"43.0"	""	"45.7"	"45.4"	""	"666"	"37"	"35.000"	"28.000"	"0.00672115999105959"	"21"	"0"	"0.00129"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPSSPSPTLGR"	"[R].sSPSSPSPTLGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZXD8"	"Transmembrane protein 245 OS=Rattus norvegicus OX=10116 GN=Tmem245 PE=1 SV=1"	"D3ZXD8"	"Transmembrane protein 245 OS=Rattus norvegicus OX=10116 GN=Tmem245 PE=1 SV=1"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"701.38013"	"1401.75298"	"1401.75352"	"-0.39"	"-0.00027"	"9/104"	"9"	"104"	"879110.37689209"	"HCD"	"MS2"	"26.61166"	"49.9"	"100.000"	"34.0759"	"8865"	"8865"	"8839"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.0"	""	"61.7"	""	"60.8"	""	"88.2"	"0.5"	"99.6"	"108.4"	""	"774"	"37"	"35.000"	"28.000"	"0.00766850958986573"	"28"	"0.0006732"	"0.009002"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPSSPSPTLGR"	"[R].sSPSSPSPTLGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZXD8"	"Transmembrane protein 245 OS=Rattus norvegicus OX=10116 GN=Tmem245 PE=1 SV=1"	"D3ZXD8"	"Transmembrane protein 245 OS=Rattus norvegicus OX=10116 GN=Tmem245 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"701.38086"	"1401.75444"	"1401.75352"	"0.66"	"0.00046"	"9/104"	"9"	"104"	"1110036.81872559"	"HCD"	"MS2"	"44.84409"	"61.4"	"100.000"	"34.0594"	"8852"	"8852"	"8825"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"71.7"	""	"78.7"	""	"85.9"	""	"101.5"	""	"119.6"	"125.2"	""	"773"	"39"	"35.000"	"28.000"	"0.00458299621166608"	"24"	"0"	"0.002465"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GESGLPDSAALR"	"[K].gESGLPDSAALR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P35248"	"Pulmonary surfactant-associated protein D OS=Rattus norvegicus OX=10116 GN=Sftpd PE=1 SV=1"	"P35248"	"Pulmonary surfactant-associated protein D OS=Rattus norvegicus OX=10116 GN=Sftpd PE=1 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"701.38293"	"1401.75859"	"1401.75352"	"3.62"	"0.00253"	"8/100"	"8"	"100"	"666203.264770508"	"HCD"	"MS2"	"0"	"31.7"	"100.000"	"52.7848"	"16473"	"16473"	"16449"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.3"	""	"37.9"	""	"41.8"	""	"65.0"	"1.8"	"55.0"	"57.2"	""	"778"	"19"	"35.000"	"28.000"	"0.540691573541994"	"23"	"0.0008629"	"0.01082"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GESGLPDSAALR"	"[K].gESGLPDSAALR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P35248"	"Pulmonary surfactant-associated protein D OS=Rattus norvegicus OX=10116 GN=Sftpd PE=1 SV=1"	"P35248"	"Pulmonary surfactant-associated protein D OS=Rattus norvegicus OX=10116 GN=Sftpd PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"701.38330"	"1401.75932"	"1401.75352"	"4.14"	"0.00290"	"7/100"	"7"	"100"	"727036.154418945"	"HCD"	"MS2"	"0"	"34.0"	"100.000"	"53.0940"	"16588"	"16588"	"16563"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.0"	""	"44.1"	""	"35.7"	""	"71.8"	"0.9"	"54.1"	"72.3"	""	"771"	"25"	"35.000"	"28.000"	"0.134903861889432"	"20"	"0.0003538"	"0.007315"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEEYEK"	"[R].vFEEYEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"701.38641"	"1401.76555"	"1401.76660"	"-0.75"	"-0.00053"	"5/54"	"5"	"54"	"1977322.73187256"	"HCD"	"MS2"	"0"	"176.5"	"100.000"	"69.3100"	"23162"	"23162"	"23145"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"220.4"	""	"231.4"	""	"256.6"	""	"293.3"	""	"295.3"	"379.0"	""	"819"	"32"	"36.000"	"29.000"	"0.0289237038470683"	"29"	"0.00413"	"0.04581"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEEYEK"	"[R].vFEEYEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"701.38660"	"1401.76592"	"1401.76660"	"-0.49"	"-0.00034"	"12/54"	"12"	"54"	"805397.115966797"	"HCD"	"MS2"	"20.80051"	"74.6"	"100.000"	"69.0197"	"23043"	"23043"	"23023"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.2"	""	"109.4"	""	"102.8"	""	"118.6"	"0.2"	"125.8"	"144.8"	""	"832"	"32"	"36.000"	"29.000"	"0.0247795451708068"	"26"	"0.002379"	"0.02457"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEEYEK"	"[R].vFEEYEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"701.38672"	"1401.76616"	"1401.76660"	"-0.32"	"-0.00022"	"12/54"	"12"	"54"	"2033519.15686035"	"HCD"	"MS2"	"0"	"184.6"	"100.000"	"69.4521"	"23205"	"23205"	"23187"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"238.9"	""	"229.9"	""	"278.0"	""	"285.1"	""	"312.6"	"406.6"	""	"829"	"31"	"36.000"	"29.000"	"0.0325480170545875"	"24"	"0.004069"	"0.04461"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEEYEK"	"[R].vFEEYEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"701.38721"	"1401.76714"	"1401.76660"	"0.38"	"0.00027"	"5/54"	"5"	"54"	"597875.185546875"	"HCD"	"MS2"	"23.48382"	"57.6"	"100.000"	"69.1480"	"23081"	"23081"	"23059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.9"	""	"76.0"	""	"80.1"	""	"88.3"	""	"94.5"	"119.4"	""	"839"	"31"	"36.000"	"29.000"	"0.0333988847500066"	"23"	"0.001886"	"0.02172"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITDPEILESR"	"[R].iTDPEILESR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P97608"	"5-oxoprolinase OS=Rattus norvegicus OX=10116 GN=Oplah PE=1 SV=2"	"P97608"	"5-oxoprolinase OS=Rattus norvegicus OX=10116 GN=Oplah PE=1 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"701.39282"	"1401.77837"	"1401.77868"	"-0.22"	"-0.00015"	"8/86"	"8"	"86"	"543421.884033203"	"HCD"	"MS2"	"24.58527"	"23.8"	"100.000"	"74.5096"	"25264"	"25264"	"25248"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.7"	""	"28.5"	""	"35.3"	""	"36.5"	""	"42.4"	"39.2"	""	"883"	"27"	"36.000"	"29.000"	"0.0918186087356281"	"29"	"0.0001301"	"0.003944"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEQYNSTFR"	"[R].eEQYNSTFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"701.84357"	"1402.67986"	"1402.68002"	"-0.12"	"-0.00008"	"5/88"	"5"	"88"	"665003.212036133"	"HCD"	"MS2"	"0"	"46.3"	"100.000"	"38.6339"	"10713"	"10713"	"10688"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.3"	""	"58.4"	""	"52.0"	""	"70.4"	""	"85.0"	"85.7"	""	"452"	"28"	"33.000"	"26.000"	"0.0396376993416238"	"18"	"0"	"0.000837"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEQYNSTFR"	"[R].eEQYNSTFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"701.84387"	"1402.68047"	"1402.68002"	"0.32"	"0.00022"	"7/88"	"7"	"88"	"367631.359619141"	"HCD"	"MS2"	"9.893261"	"32.1"	"100.000"	"38.9130"	"10818"	"10818"	"10789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.3"	""	"47.6"	""	"36.1"	""	"44.9"	"0.6"	"59.2"	"63.2"	""	"447"	"34"	"33.000"	"26.000"	"0.00815225071378733"	"22"	"0"	"0.001611"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALTGGYYDTR"	"[R].gALTGGYYDTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"701.86182"	"1402.71636"	"1402.71641"	"-0.04"	"-0.00003"	"8/92"	"8"	"92"	"420153.700927734"	"HCD"	"MS2"	"22.62972"	"29.4"	"100.000"	"50.7942"	"15661"	"15661"	"15636"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.3"	""	"25.7"	""	"34.5"	""	"49.2"	""	"59.5"	"68.7"	""	"627"	"29"	"34.000"	"27.000"	"0.0408542785044795"	"24"	"0"	"0.0003694"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALTGGYYDTR"	"[R].gALTGGYYDTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"701.86194"	"1402.71660"	"1402.71641"	"0.14"	"0.00010"	"9/92"	"9"	"92"	"479408.479858398"	"HCD"	"MS2"	"24.99134"	"33.9"	"100.000"	"51.0203"	"15742"	"15742"	"15714"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.4"	""	"40.5"	""	"42.2"	""	"55.9"	""	"68.0"	"71.0"	""	"627"	"45"	"34.000"	"27.000"	"0.000968807618093009"	"25"	"0"	"0.0001768"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYGEDAK"	"[K].dFYGEDAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"701.86548"	"1402.72368"	"1402.72547"	"-1.27"	"-0.00089"	"7/66"	"7"	"66"	"1122748.17169189"	"HCD"	"MS2"	"43.59238"	"95.9"	"100.000"	"55.2461"	"17475"	"17475"	"17447"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"138.9"	""	"119.5"	""	"107.8"	""	"144.3"	""	"177.2"	"225.1"	""	"648"	"28"	"35.000"	"28.000"	"0.0517064843704702"	"21"	"0.0008629"	"0.009583"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYGEDAK"	"[K].dFYGEDAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"701.86578"	"1402.72429"	"1402.72547"	"-0.84"	"-0.00059"	"6/66"	"6"	"66"	"1220537.69476318"	"HCD"	"MS2"	"38.98137"	"107.0"	"100.000"	"55.4993"	"17564"	"17564"	"17543"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"159.6"	""	"128.0"	""	"104.1"	""	"172.9"	""	"187.1"	"267.9"	""	"641"	"29"	"35.000"	"28.000"	"0.0435339459631183"	"21"	"0.0006732"	"0.008404"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIPLESTDGER"	"[K].gIPLESTDGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P09414"	"Nuclear factor 1 A-type OS=Rattus norvegicus OX=10116 GN=Nfia PE=1 SV=2"	"P09414"	"Nuclear factor 1 A-type OS=Rattus norvegicus OX=10116 GN=Nfia PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"701.87244"	"1402.73760"	"1402.73754"	"0.04"	"0.00003"	"9/90"	"9"	"90"	"1697125.42175293"	"HCD"	"MS2"	"50.97679"	"96.0"	"100.000"	"50.2305"	"15432"	"15432"	"15408"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"154.0"	""	"95.0"	""	"109.2"	""	"182.3"	""	"178.3"	"193.9"	""	"759"	"24"	"35.000"	"28.000"	"0.147982983943748"	"20"	"0"	"0.001847"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIPLESTDGER"	"[K].gIPLESTDGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P09414"	"Nuclear factor 1 A-type OS=Rattus norvegicus OX=10116 GN=Nfia PE=1 SV=2"	"P09414"	"Nuclear factor 1 A-type OS=Rattus norvegicus OX=10116 GN=Nfia PE=1 SV=2"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"701.87286"	"1402.73845"	"1402.73754"	"0.65"	"0.00046"	"6/90"	"6"	"90"	"1649899.33258057"	"HCD"	"MS2"	"48.85238"	"91.8"	"100.000"	"50.6042"	"15573"	"15573"	"15550"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"137.2"	""	"91.1"	""	"110.7"	""	"165.6"	""	"170.9"	"202.8"	""	"759"	"18"	"35.000"	"28.000"	"0.647458266626685"	"20"	"0"	"0.001499"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEESAVMVVPR"	"[R].gEESAVMVVPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"468.25662"	"1402.75531"	"1402.75617"	"-0.61"	"-0.00028"	"13/84"	"13"	"84"	"1029033.85601807"	"HCD"	"MS2"	"24.20268"	"32.7"	"100.000"	"58.0098"	"18587"	"18587"	"18559"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.3"	""	"43.6"	""	"54.5"	""	"42.9"	"1.0"	"59.6"	"61.0"	""	"859"	"28"	"36.000"	"29.000"	"0.0706257655120813"	"22"	"0"	"0.00271"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEESAVMVVPR"	"[R].gEESAVMVVPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"701.88202"	"1402.75676"	"1402.75617"	"0.42"	"0.00030"	"10/84"	"10"	"84"	"1809963.5793457"	"HCD"	"MS2"	"14.90597"	"95.5"	"100.000"	"57.9499"	"18562"	"18562"	"18543"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"142.0"	""	"179.3"	""	"146.0"	""	"115.5"	"2.1"	"153.0"	"165.5"	""	"847"	"41"	"36.000"	"29.000"	"0.00364630854050178"	"20"	"0"	"4.266E-05"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEESAVMVVPR"	"[R].gEESAVMVVPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"701.88275"	"1402.75823"	"1402.75617"	"1.47"	"0.00103"	"10/84"	"10"	"84"	"1198719.52868652"	"HCD"	"MS2"	"34.45202"	"75.2"	"100.000"	"57.9573"	"18580"	"18580"	"18559"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"125.9"	""	"122.7"	""	"115.0"	""	"95.5"	"0.5"	"122.5"	"128.9"	""	"926"	"28"	"36.000"	"29.000"	"0.0766621493086391"	"18"	"0"	"3.658E-05"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEESAVMVVPR"	"[R].gEESAVMVVPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"701.88348"	"1402.75969"	"1402.75617"	"2.51"	"0.00176"	"10/84"	"10"	"84"	"1200607.60461426"	"HCD"	"MS2"	"7.681162"	"67.0"	"100.000"	"57.6577"	"18458"	"18458"	"18437"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"108.9"	""	"116.1"	""	"99.8"	""	"91.8"	""	"108.9"	"112.0"	""	"916"	"40"	"36.000"	"29.000"	"0.00460114031947505"	"19"	"0"	"1.447E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTGAEALLER"	"[K].dVTGAEALLER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"701.88947"	"1402.77165"	"1402.77392"	"-1.62"	"-0.00114"	"9/98"	"9"	"98"	"404863.671630859"	"HCD"	"MS2"	"8.012346"	"24.2"	"100.000"	"80.2107"	"27568"	"27568"	"27550"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.9"	""	"28.4"	""	"27.6"	""	"33.6"	"0.4"	"41.8"	"54.9"	""	"975"	"55"	"36.000"	"29.000"	"0.00014354055464769"	""	"0"	"6.408E-05"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTGAEALLER"	"[K].dVTGAEALLER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"701.88959"	"1402.77190"	"1402.77392"	"-1.44"	"-0.00101"	"13/98"	"13"	"98"	"3578281.13787842"	"HCD"	"MS2"	"0"	"156.7"	"100.000"	"79.9198"	"27452"	"27452"	"27435"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"205.7"	""	"152.3"	""	"176.0"	""	"214.1"	""	"340.3"	"405.3"	""	"963"	"64"	"36.000"	"29.000"	"1.77254100808879E-05"	""	"0"	"6.593E-06"	"0.942"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTGAEALLER"	"[K].dVTGAEALLER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"701.89014"	"1402.77300"	"1402.77392"	"-0.66"	"-0.00046"	"8/98"	"8"	"98"	"344351.174987793"	"HCD"	"MS2"	"10.58903"	"22.9"	"100.000"	"80.2218"	"27569"	"27569"	"27550"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.1"	""	"26.4"	""	"23.4"	""	"39.4"	""	"48.2"	"49.3"	""	"991"	"40"	"36.000"	"29.000"	"0.00511733276554772"	"29"	"0"	"0.0006282"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTGAEALLER"	"[K].dVTGAEALLER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"701.89044"	"1402.77361"	"1402.77392"	"-0.23"	"-0.00016"	"6/98"	"6"	"98"	"372776.776428223"	"HCD"	"MS2"	"28.90918"	"20.8"	"100.000"	"79.6173"	"27330"	"27330"	"27314"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.1"	""	"26.7"	""	"25.4"	""	"29.1"	""	"40.7"	"43.9"	""	"996"	"40"	"36.000"	"29.000"	"0.00465832025725481"	"24"	"0"	"0.0002316"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTGAEALLER"	"[K].dVTGAEALLER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7377"	"0.0000"	"1"	"1"	"1"	"701.89050"	"1402.77373"	"1402.77392"	"-0.14"	"-0.00010"	"9/98"	"9"	"98"	"4136711.55883789"	"HCD"	"MS2"	"0"	"169.3"	"100.000"	"79.9059"	"27442"	"27442"	"27425"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"219.4"	""	"187.1"	""	"185.2"	""	"240.9"	""	"344.5"	"438.8"	""	"1000"	"61"	"36.000"	"30.000"	"4.304968760923E-05"	""	"0"	"8.308E-06"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTGAEALLER"	"[K].dVTGAEALLER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"701.89111"	"1402.77495"	"1402.77392"	"0.73"	"0.00051"	"8/98"	"8"	"98"	"290354.508911133"	"HCD"	"MS2"	"33.0001"	"19.2"	"100.000"	"79.6078"	"27322"	"27322"	"27300"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.9"	""	"23.3"	""	"22.8"	""	"30.2"	"0.5"	"38.0"	"43.5"	""	"998"	"32"	"36.000"	"29.000"	"0.0353264946407684"	"29"	"0"	"0.0006915"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.8983"	"0.0000"	"1"	"1"	"1"	"701.89178"	"1402.77629"	"1402.77795"	"-1.18"	"-0.00083"	"8/86"	"8"	"86"	"633075.614868164"	"HCD"	"MS2"	"59.0894"	"16.1"	"100.000"	"92.1378"	"32237"	"32237"	"32227"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.6"	""	"20.7"	""	"21.8"	""	"26.2"	""	"32.1"	"32.6"	""	"975"	"59"	"36.000"	"29.000"	"6.08099463193435E-05"	"22"	"0.0003538"	"0.006219"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"701.89203"	"1402.77678"	"1402.77795"	"-0.83"	"-0.00058"	"8/86"	"8"	"86"	"678733.168762207"	"HCD"	"MS2"	"51.06059"	"18.9"	"100.000"	"92.2280"	"32281"	"32281"	"32269"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.5"	""	"26.3"	""	"30.6"	""	"28.2"	""	"28.8"	"39.4"	""	"975"	"63"	"36.000"	"29.000"	"2.54082421663727E-05"	"24"	"0"	"0.002321"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.8953"	"0.0000"	"1"	"1"	"1"	"701.89209"	"1402.77690"	"1402.77795"	"-0.74"	"-0.00052"	"9/86"	"9"	"86"	"1233754.60296631"	"HCD"	"MS2"	"21.4576"	"35.6"	"100.000"	"92.7903"	"32502"	"32502"	"32489"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.5"	""	"60.8"	""	"51.8"	""	"42.6"	"0.5"	"61.7"	"82.0"	""	"957"	"86"	"36.000"	"29.000"	"1.11142955705687E-07"	"27"	"0"	"0.0003959"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"701.89215"	"1402.77703"	"1402.77795"	"-0.66"	"-0.00046"	"8/86"	"8"	"86"	"658917.311218262"	"HCD"	"MS2"	"26.79118"	"20.1"	"100.000"	"93.4505"	"32737"	"32737"	"32727"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.3"	""	"25.1"	""	"30.8"	""	"29.4"	""	"36.5"	"40.9"	""	"957"	"72"	"36.000"	"29.000"	"2.79178482394987E-06"	"19"	"0"	"0.002962"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"701.89215"	"1402.77703"	"1402.77795"	"-0.66"	"-0.00046"	"9/86"	"9"	"86"	"823633.668457031"	"HCD"	"MS2"	"23.33944"	"25.0"	"100.000"	"93.3379"	"32710"	"32710"	"32699"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.6"	""	"40.3"	""	"38.7"	""	"34.4"	""	"46.1"	"52.0"	""	"957"	"82"	"36.000"	"29.000"	"3.11087056829169E-07"	"26"	"0"	"0.002115"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"701.89215"	"1402.77703"	"1402.77795"	"-0.66"	"-0.00046"	"9/86"	"9"	"86"	"1145897.22814941"	"HCD"	"MS2"	"17.75823"	"30.1"	"100.000"	"92.9332"	"32543"	"32543"	"32535"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.5"	""	"40.2"	""	"45.0"	""	"45.6"	""	"54.3"	"63.7"	""	"957"	"86"	"36.000"	"29.000"	"1.09870712812177E-07"	"28"	"0"	"0.0006411"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"701.89221"	"1402.77715"	"1402.77795"	"-0.57"	"-0.00040"	"9/86"	"9"	"86"	"548137.747619629"	"HCD"	"MS2"	"45.91137"	"16.1"	"100.000"	"93.7446"	"32845"	"32845"	"32836"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.0"	""	"26.2"	""	"23.7"	""	"18.8"	""	"34.6"	"30.9"	""	"957"	"60"	"36.000"	"29.000"	"4.85156598075002E-05"	"22"	"0.0001301"	"0.003847"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"701.89221"	"1402.77715"	"1402.77795"	"-0.57"	"-0.00040"	"9/86"	"9"	"86"	"929901.455871582"	"HCD"	"MS2"	"17.79624"	"29.6"	"100.000"	"93.1863"	"32638"	"32638"	"32633"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.3"	""	"38.6"	""	"48.9"	""	"45.3"	""	"50.8"	"69.1"	""	"957"	"82"	"36.000"	"29.000"	"3.10371576452833E-07"	"26"	"0"	"0.002886"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.9103"	"0.0000"	"1"	"1"	"1"	"701.89233"	"1402.77739"	"1402.77795"	"-0.40"	"-0.00028"	"9/86"	"9"	"86"	"923189.288269043"	"HCD"	"MS2"	"26.55164"	"27.1"	"100.000"	"92.3981"	"32338"	"32338"	"32329"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.7"	""	"41.0"	""	"40.5"	""	"39.7"	""	"47.0"	"55.8"	""	"975"	"78"	"36.000"	"29.000"	"8.62928117179744E-07"	"24"	"0"	"0.001387"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.8902"	"0.0000"	"1"	"1"	"1"	"701.89233"	"1402.77739"	"1402.77795"	"-0.40"	"-0.00028"	"9/86"	"9"	"86"	"1146369.67297363"	"HCD"	"MS2"	"19.46307"	"32.3"	"100.000"	"92.6646"	"32441"	"32441"	"32432"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.7"	""	"50.0"	""	"50.6"	""	"45.7"	""	"49.7"	"72.8"	""	"975"	"82"	"36.000"	"29.000"	"3.04070732297679E-07"	"26"	"0"	"0.001183"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.9103"	"0.0000"	"1"	"1"	"1"	"701.89240"	"1402.77751"	"1402.77795"	"-0.31"	"-0.00022"	"9/86"	"9"	"86"	"1146086.33758545"	"HCD"	"MS2"	"15.28483"	"32.6"	"100.000"	"93.0654"	"32606"	"32606"	"32595"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.9"	""	"53.0"	""	"53.0"	""	"40.7"	""	"53.7"	"75.6"	""	"978"	"78"	"36.000"	"29.000"	"7.8398699604743E-07"	"25"	"0"	"0.001831"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.8659"	"0.0000"	"1"	"1"	"1"	"701.89252"	"1402.77776"	"1402.77795"	"-0.14"	"-0.00010"	"9/86"	"9"	"86"	"599490.403564453"	"HCD"	"MS2"	"39.21737"	"17.0"	"100.000"	"93.6046"	"32809"	"32809"	"32800"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.3"	""	"21.3"	""	"27.1"	""	"30.6"	""	"32.3"	"35.9"	""	"973"	"82"	"36.000"	"29.000"	"3.14834882561686E-07"	"29"	"0"	"0.001486"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"701.89252"	"1402.77776"	"1402.77795"	"-0.14"	"-0.00010"	"9/86"	"9"	"86"	"981314.385375977"	"HCD"	"MS2"	"27.33205"	"29.0"	"100.000"	"92.5086"	"32391"	"32391"	"32377"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.8"	""	"37.0"	""	"47.6"	""	"40.6"	""	"48.2"	"67.0"	""	"973"	"86"	"36.000"	"29.000"	"1.11194381784215E-07"	"28"	"0"	"0.0004781"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVEQLQK"	"[K].eAVEQLQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.6098"	"0.0000"	"1"	"1"	"1"	"701.91876"	"1402.83025"	"1402.83060"	"-0.25"	"-0.00018"	"7/68"	"7"	"68"	"1417347.00195313"	"HCD"	"MS2"	"17.77602"	"109.9"	"100.000"	"50.4021"	"15490"	"15490"	"15470"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"186.9"	""	"113.8"	""	"118.2"	""	"220.1"	""	"170.0"	"232.1"	""	"824"	"41"	"36.000"	"29.000"	"0.00310382492258292"	""	"0"	"0.002528"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVEQLQK"	"[K].eAVEQLQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.5778"	"0.0000"	"1"	"1"	"1"	"701.91895"	"1402.83061"	"1402.83060"	"0.01"	"0.00001"	"14/68"	"14"	"68"	"1291490.41033936"	"HCD"	"MS2"	"3.715676"	"102.2"	"100.000"	"49.9980"	"15337"	"15337"	"15318"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"165.0"	""	"79.3"	""	"114.0"	""	"225.6"	""	"171.3"	"215.2"	""	"819"	"45"	"36.000"	"29.000"	"0.00126256546562711"	""	"0"	"0.002303"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVANVSIEDR"	"[K].dGVANVSIEDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"0"	"2"	"2"	"0.7794"	"0.0000"	"1"	"1"	"1"	"702.36945"	"1403.73161"	"1403.73279"	"-0.84"	"-0.00059"	"10/110"	"10"	"110"	"1760725.22332764"	"HCD"	"MS2"	"14.56752"	"95.9"	"100.000"	"48.7684"	"14836"	"14836"	"14815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"138.2"	""	"94.6"	""	"101.9"	""	"223.3"	"0.5"	"179.9"	"171.2"	""	"745"	"68"	"35.000"	"28.000"	"6.3114083066663E-06"	""	"0"	"3.537E-06"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVANVSIEDR"	"[K].dGVANVSIEDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"702.37036"	"1403.73345"	"1403.73279"	"0.47"	"0.00033"	"9/110"	"9"	"110"	"2384869.97479248"	"HCD"	"MS2"	"43.58064"	"100.3"	"100.000"	"49.3929"	"15078"	"15078"	"15059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"181.3"	""	"166.3"	""	"167.8"	""	"171.2"	""	"117.5"	"141.5"	""	"747"	"29"	"35.000"	"28.000"	"0.0452158402881106"	"17"	"0"	"0.0008386"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVANVSIEDR"	"[K].dGVANVSIEDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"0"	"2"	"2"	"0.8254"	"0.0000"	"1"	"1"	"1"	"702.37048"	"1403.73369"	"1403.73279"	"0.64"	"0.00045"	"9/110"	"9"	"110"	"1059636.61883545"	"HCD"	"MS2"	"26.53228"	"66.1"	"100.000"	"49.1032"	"14960"	"14960"	"14934"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"95.3"	""	"68.4"	""	"80.2"	""	"146.8"	"1.1"	"121.9"	"112.7"	""	"748"	"63"	"35.000"	"28.000"	"1.85298371360992E-05"	"28"	"0"	"3.501E-06"	"1.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSTTIEAVKR"	"[M].aGSTTIEAVkR.[K]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"1"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"702.40607"	"1403.80486"	"1403.80556"	"-0.50"	"-0.00035"	"13/90"	"13"	"90"	"2481881.18341064"	"HCD"	"MS2"	"40.01695"	"110.8"	"100.000"	"49.0051"	"14932"	"14932"	"14919"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"204.8"	""	"179.8"	""	"189.2"	""	"176.1"	""	"140.5"	"155.1"	""	"984"	"20"	"36.000"	"29.000"	"0.512820175261505"	"19"	"0"	"0.001449"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSTTIEAVKR"	"[M].aGSTTIEAVkR.[K]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"1"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"702.40619"	"1403.80510"	"1403.80556"	"-0.33"	"-0.00023"	"9/90"	"9"	"90"	"2488899.71850586"	"HCD"	"MS2"	"36.23927"	"101.9"	"100.000"	"49.4273"	"15092"	"15092"	"15073"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"189.3"	""	"187.9"	""	"182.2"	""	"153.0"	""	"116.9"	"131.7"	""	"985"	"31"	"36.000"	"29.000"	"0.0407761515628325"	"23"	"0"	"0.0007979"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDDVAALDK"	"[R].vDDVAALDk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"702.41034"	"1403.81340"	"1403.81462"	"-0.86"	"-0.00061"	"8/76"	"8"	"76"	"985234.529785156"	"HCD"	"MS2"	"36.58439"	"59.3"	"100.000"	"71.5976"	"24080"	"24080"	"24056"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"73.3"	""	"67.1"	""	"75.1"	""	"101.5"	""	"127.3"	"119.4"	""	"937"	"34"	"36.000"	"29.000"	"0.0183954152234712"	"23"	"0"	"0.0007139"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVEQLQK"	"[K].eAVEQLqk.[T]"	"N-Term(TMT6plex); Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"702.41064"	"1403.81401"	"1403.81462"	"-0.43"	"-0.00030"	"7/68"	"7"	"68"	"458862.954650879"	"HCD"	"MS2"	"34.78919"	"37.7"	"100.000"	"53.4730"	"16754"	"16754"	"16732"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.7"	""	"40.8"	""	"41.2"	""	"69.3"	""	"80.3"	"75.1"	""	"985"	"28"	"36.000"	"29.000"	"0.0735201246717656"	""	"0.0008629"	"0.0106"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQEVSILK"	"[R].eQEVSILk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.4865"	"0.0000"	"1"	"1"	"3"	"702.42865"	"1403.85002"	"1403.85100"	"-0.70"	"-0.00049"	"14/76"	"14"	"76"	"809613.332092285"	"HCD"	"MS2"	"49.53499"	"59.3"	"100.000"	"66.0222"	"21822"	"21822"	"21796"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.9"	""	"83.9"	""	"87.0"	""	"104.0"	""	"104.1"	"101.2"	""	"763"	"37"	"35.000"	"28.000"	"0.00802591474770909"	""	"0"	"0.00158"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQEVSILK"	"[R].eQEVSILk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.5588"	"0.0000"	"1"	"1"	"3"	"702.42908"	"1403.85088"	"1403.85100"	"-0.09"	"-0.00006"	"7/76"	"7"	"76"	"826433.582763672"	"HCD"	"MS2"	"50.27558"	"61.3"	"100.000"	"66.1068"	"21841"	"21841"	"21816"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.3"	""	"82.1"	""	"89.7"	""	"112.2"	""	"98.4"	"110.7"	""	"765"	"34"	"35.000"	"28.000"	"0.0146093683596318"	""	"0"	"0.001609"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTMNSYEMR"	"[R].sGTMNSYEMR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.9778"	"0.0000"	"1"	"1"	"1"	"702.82574"	"1404.64421"	"1404.64490"	"-0.49"	"-0.00034"	"8/96"	"8"	"96"	"6831383.01397705"	"HCD"	"MS2"	"0"	"366.6"	"100.000"	"39.3563"	"11008"	"11008"	"10991"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"674.2"	""	"570.2"	""	"589.2"	""	"323.7"	"10.6"	"618.2"	"681.1"	""	"236"	"45"	"30.000"	"23.000"	"0.000406332918300739"	"17"	"0"	"8.009E-05"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTMNSYEMR"	"[R].sGTMNSYEMR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"702.82593"	"1404.64458"	"1404.64490"	"-0.23"	"-0.00016"	"8/96"	"8"	"96"	"6193562.21374512"	"HCD"	"MS2"	"0"	"342.6"	"100.000"	"39.5754"	"11087"	"11087"	"11070"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"615.3"	""	"557.9"	""	"539.0"	""	"305.1"	"6.8"	"568.2"	"648.1"	""	"236"	"41"	"30.000"	"23.000"	"0.000891008828645213"	"15"	"0"	"9.724E-05"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVQGWGENDR"	"[K].dVQGWGENDR.[G]"	"N-Term(TMT6plex)"	"2"	"2"	"P62138; P62142"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1;Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"P62138; P62142"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1; Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"702.83820"	"1404.66911"	"1404.67052"	"-1.00"	"-0.00070"	"8/102"	"8"	"102"	"1370341.82324219"	"HCD"	"MS2"	"50.10922"	"130.6"	"100.000"	"44.5599"	"13122"	"13122"	"13096"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"158.1"	""	"116.5"	""	"132.9"	""	"257.6"	"3.0"	"303.8"	"270.2"	""	"338"	"15"	"32.000"	"25.000"	"0.534424924568456"	"14"	"0.001211"	"0.01552"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYVTIIDAPGHR"	"[K].YYVTIIDAPGHR.[D]"	""	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"468.91370"	"1404.72654"	"1404.72703"	"-0.35"	"-0.00016"	"9/94"	"9"	"94"	"1967044.44793701"	"HCD"	"MS2"	"6.045983"	"42.0"	"100.000"	"53.6112"	"16811"	"16811"	"16780"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.1"	""	"43.5"	""	"51.2"	""	"82.1"	""	"86.4"	"96.4"	"NoQuanLabels"	"755"	"26"	"35.000"	"28.000"	"0.0895193573887275"	"14"	"0.001211"	"0.01424"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYVTIIDAPGHR"	"[K].YYVTIIDAPGHR.[D]"	""	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"468.91409"	"1404.72773"	"1404.72703"	"0.50"	"0.00023"	"6/94"	"6"	"94"	"1313719.69274902"	"HCD"	"MS2"	"44.6547"	"30.8"	"100.000"	"53.7980"	"16876"	"16876"	"16848"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.0"	""	"31.9"	""	"39.1"	""	"55.5"	"0.5"	"64.6"	"67.3"	"NoQuanLabels"	"755"	"21"	"35.000"	"28.000"	"0.291686920873628"	"14"	"0.0008629"	"0.009746"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEDVWLEAAR"	"[K].sEDVWLEAAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"A1A5S1"	"Pre-mRNA-processing factor 6 OS=Rattus norvegicus OX=10116 GN=Prpf6 PE=1 SV=1"	"A1A5S1"	"Pre-mRNA-processing factor 6 OS=Rattus norvegicus OX=10116 GN=Prpf6 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"702.86914"	"1404.73100"	"1404.73206"	"-0.75"	"-0.00053"	"9/84"	"9"	"84"	"480284.817871094"	"HCD"	"MS2"	"24.00141"	"29.3"	"100.000"	"75.0597"	"25493"	"25493"	"25476"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.2"	""	"36.1"	""	"30.9"	""	"57.3"	""	"74.6"	"52.9"	""	"774"	"39"	"35.000"	"28.000"	"0.00488327255886589"	"24"	"0"	"0.0001108"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEDVWLEAAR"	"[K].sEDVWLEAAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"A1A5S1"	"Pre-mRNA-processing factor 6 OS=Rattus norvegicus OX=10116 GN=Prpf6 PE=1 SV=1"	"A1A5S1"	"Pre-mRNA-processing factor 6 OS=Rattus norvegicus OX=10116 GN=Prpf6 PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"702.86963"	"1404.73198"	"1404.73206"	"-0.06"	"-0.00004"	"8/84"	"8"	"84"	"469166.483703613"	"HCD"	"MS2"	"27.72293"	"30.9"	"100.000"	"75.1659"	"25525"	"25525"	"25505"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.9"	""	"35.2"	""	"32.7"	""	"55.5"	""	"70.9"	"70.3"	""	"782"	"50"	"35.000"	"28.000"	"0.000431694740381711"	"21"	"0"	"5.42E-05"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDDGTGPEK"	"[K].qDDGTGPEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"702.87134"	"1404.73540"	"1404.73709"	"-1.21"	"-0.00085"	"5/92"	"5"	"92"	"515615.826416016"	"HCD"	"MS2"	"0"	"47.3"	"100.000"	"27.1266"	"6052"	"6052"	"6030"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.9"	""	"47.2"	""	"46.2"	""	"88.6"	"0.6"	"102.7"	"85.0"	""	"808"	"32"	"36.000"	"29.000"	"0.0254906767169998"	"24"	"0.0003538"	"0.007026"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDDGTGPEK"	"[K].qDDGTGPEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"702.87213"	"1404.73699"	"1404.73709"	"-0.08"	"-0.00005"	"11/92"	"11"	"92"	"517245.510192871"	"HCD"	"MS2"	"0"	"51.4"	"100.000"	"27.1823"	"6059"	"6059"	"6033"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.6"	""	"46.9"	""	"46.7"	""	"100.6"	""	"110.9"	"106.3"	""	"842"	"28"	"36.000"	"29.000"	"0.0637209285591644"	"25"	"0.0002479"	"0.00572"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAQGPDDTK"	"[K].dAQGPDDTk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6TRW4"	"Sister chromatid cohesion protein PDS5 homolog B OS=Rattus norvegicus OX=10116 GN=Pds5b PE=1 SV=2"	"Q6TRW4"	"Sister chromatid cohesion protein PDS5 homolog B OS=Rattus norvegicus OX=10116 GN=Pds5b PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"702.87244"	"1404.73760"	"1404.73709"	"0.36"	"0.00025"	"10/90"	"10"	"90"	"233731.544616699"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"27.5699"	"6216"	"6216"	"6188"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.2"	""	"22.7"	""	"21.2"	""	"27.4"	""	"38.5"	"44.5"	""	"837"	"32"	"36.000"	"29.000"	"0.0285558743498289"	"17"	"0.003507"	"0.0362"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAQGPDDTK"	"[K].dAQGPDDTk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6TRW4"	"Sister chromatid cohesion protein PDS5 homolog B OS=Rattus norvegicus OX=10116 GN=Pds5b PE=1 SV=2"	"Q6TRW4"	"Sister chromatid cohesion protein PDS5 homolog B OS=Rattus norvegicus OX=10116 GN=Pds5b PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"702.87250"	"1404.73772"	"1404.73709"	"0.44"	"0.00031"	"11/90"	"11"	"90"	"284818.972290039"	"HCD"	"MS2"	"0"	"25.6"	"100.000"	"27.4659"	"6189"	"6189"	"6163"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.4"	""	"34.5"	""	"24.3"	""	"40.6"	""	"57.6"	"53.0"	""	"838"	"38"	"36.000"	"29.000"	"0.00698576582058895"	"19"	"0.0008629"	"0.01012"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGDGGSAGPGGK"	"[R].sGDGGSAGPGGk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5XIM5"	"Protein CDV3 homolog OS=Rattus norvegicus OX=10116 GN=Cdv3 PE=1 SV=1"	"Q5XIM5"	"Protein CDV3 homolog OS=Rattus norvegicus OX=10116 GN=Cdv3 PE=1 SV=1"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"702.87720"	"1404.74712"	"1404.74833"	"-0.86"	"-0.00060"	"11/98"	"11"	"98"	"719273.247070313"	"HCD"	"MS2"	"11.85493"	"59.5"	"100.000"	"23.9619"	"4781"	"4781"	"4755"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"101.5"	""	"81.4"	""	"85.6"	""	"98.0"	""	"99.0"	"97.9"	""	"868"	"62"	"36.000"	"29.000"	"2.63930590554964E-05"	"20"	"0"	"4.371E-06"	"0.981"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DADFHVDK"	"[R].dADFHVDk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"468.92178"	"1404.75080"	"1404.75235"	"-1.11"	"-0.00052"	"7/68"	"7"	"68"	"83747187.5712891"	"HCD"	"MS2"	"4.534776"	"446.8"	"15.488"	"47.8826"	"14475"	"14475"	"14460"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"724.2"	""	"570.8"	""	"583.9"	""	"776.5"	""	"795.8"	"783.1"	""	"922"	"44"	"36.000"	"29.000"	"0.00166226754432977"	"28"	"0"	"0.00102"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DADFHVDK"	"[R].dADFHVDk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.6286"	"0.0000"	"1"	"1"	"1"	"468.92194"	"1404.75125"	"1404.75235"	"-0.78"	"-0.00037"	"7/68"	"7"	"68"	"9236422.12927246"	"HCD"	"MS2"	"9.957902"	"337.7"	"100.000"	"47.5954"	"14358"	"14358"	"14333"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"587.2"	""	"468.9"	""	"429.3"	""	"595.9"	"0.2"	"572.6"	"539.8"	""	"914"	"35"	"36.000"	"29.000"	"0.0134560068664603"	"27"	"0"	"0.001854"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DADFHVDK"	"[R].dADFHVDk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"468.92200"	"1404.75144"	"1404.75235"	"-0.65"	"-0.00030"	"7/68"	"7"	"68"	"4896180.49963379"	"HCD"	"MS2"	"6.484076"	"198.0"	"100.000"	"48.1810"	"14596"	"14596"	"14578"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"298.6"	"2.8"	"245.3"	""	"256.8"	""	"332.8"	""	"364.3"	"378.8"	""	"913"	"36"	"36.000"	"29.000"	"0.0123151805091111"	"27"	"0"	"0.003028"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DADFHVDK"	"[R].dADFHVDk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"468.92209"	"1404.75171"	"1404.75235"	"-0.45"	"-0.00021"	"9/68"	"9"	"68"	"6200534.34960938"	"HCD"	"MS2"	"5.973141"	"222.7"	"100.000"	"48.5137"	"14719"	"14719"	"14702"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"348.8"	""	"288.9"	""	"291.2"	""	"378.0"	""	"397.7"	"404.7"	""	"944"	"27"	"36.000"	"29.000"	"0.0907699296045595"	"22"	"0.0008629"	"0.01036"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DADFHVDK"	"[R].dADFHVDk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"468.92212"	"1404.75180"	"1404.75235"	"-0.39"	"-0.00018"	"7/68"	"7"	"68"	"6082869.67041016"	"HCD"	"MS2"	"16.1656"	"234.0"	"100.000"	"47.9144"	"14476"	"14476"	"14458"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"396.4"	""	"337.4"	""	"293.3"	""	"417.0"	""	"391.9"	"378.5"	""	"944"	"44"	"36.000"	"29.000"	"0.00175364628133866"	"29"	"0"	"0.001105"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DADFHVDK"	"[R].dADFHVDk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"468.92215"	"1404.75190"	"1404.75235"	"-0.32"	"-0.00015"	"7/68"	"7"	"68"	"82493928.1694336"	"HCD"	"MS2"	"4.52892"	"538.2"	"17.894"	"48.1972"	"14591"	"14591"	"14574"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"867.2"	""	"719.2"	""	"688.5"	""	"942.0"	""	"951.9"	"930.0"	""	"944"	"39"	"36.000"	"29.000"	"0.00639649402629689"	""	"0"	"0.001725"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DADFHVDK"	"[R].dADFHVDk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.5814"	"0.0000"	"1"	"1"	"1"	"702.87970"	"1404.75212"	"1404.75235"	"-0.16"	"-0.00011"	"7/68"	"7"	"68"	"513596.291137695"	"HCD"	"MS2"	"0"	"47.2"	"100.000"	"48.0295"	"14523"	"14523"	"14499"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.3"	""	"57.1"	""	"59.0"	""	"82.2"	"2.0"	"95.5"	"75.2"	""	"940"	"43"	"36.000"	"29.000"	"0.00214831449118991"	""	"0"	"0.003488"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DADFHVDK"	"[R].dADFHVDk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"702.87982"	"1404.75237"	"1404.75235"	"0.01"	"0.00001"	"7/68"	"7"	"68"	"981439.94128418"	"HCD"	"MS2"	"8.005937"	"84.4"	"100.000"	"47.7380"	"14416"	"14416"	"14397"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"135.2"	""	"105.6"	""	"109.5"	""	"150.8"	"3.8"	"156.8"	"136.8"	""	"938"	"43"	"36.000"	"29.000"	"0.0025952120122218"	""	"0"	"0.002053"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGPAFTDAIR"	"[K].vEGPAFTDAIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"3"	"3"	"0.7209"	"0.0000"	"1"	"1"	"1"	"468.92722"	"1404.76709"	"1404.76845"	"-0.96"	"-0.00045"	"11/92"	"11"	"92"	"405921.63671875"	"HCD"	"MS2"	"21.63651"	"9.4"	"100.000"	"74.1071"	"25114"	"25114"	"25089"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.3"	""	"14.3"	""	"13.7"	""	"15.2"	""	"17.8"	"18.7"	""	"979"	"43"	"36.000"	"29.000"	"0.00265309435851595"	"28"	"0"	"0.001147"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGPAFTDAIR"	"[K].vEGPAFTDAIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"702.88739"	"1404.76750"	"1404.76845"	"-0.67"	"-0.00047"	"7/92"	"7"	"92"	"507287.973388672"	"HCD"	"MS2"	"0"	"29.7"	"100.000"	"74.3218"	"25202"	"25202"	"25185"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.2"	""	"32.9"	""	"35.1"	""	"51.7"	"0.2"	"59.9"	"58.8"	""	"962"	"36"	"36.000"	"29.000"	"0.0131263831353067"	"25"	"0.0002479"	"0.005397"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFEQPLAISR"	"[K].dFEQPLAISR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"702.88739"	"1404.76750"	"1404.76845"	"-0.67"	"-0.00047"	"9/100"	"9"	"100"	"1757668.29107666"	"HCD"	"MS2"	"0"	"81.7"	"100.000"	"74.7449"	"25360"	"25360"	"25347"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.1"	""	"73.7"	""	"73.0"	""	"186.1"	""	"168.4"	"154.5"	""	"962"	"51"	"36.000"	"29.000"	"0.000415092681475913"	"26"	"0"	"0.000124"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFEQPLAISR"	"[K].dFEQPLAISR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"0"	"2"	"2"	"0.8448"	"0.0000"	"1"	"1"	"1"	"702.88745"	"1404.76763"	"1404.76845"	"-0.58"	"-0.00041"	"8/100"	"8"	"100"	"1628995.16400146"	"HCD"	"MS2"	"0"	"77.1"	"100.000"	"74.6215"	"25323"	"25323"	"25310"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"98.4"	""	"72.7"	""	"73.6"	""	"167.8"	""	"159.2"	"166.6"	""	"958"	"58"	"36.000"	"29.000"	"8.17213464332497E-05"	"25"	"0"	"7.737E-05"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGPAFTDAIR"	"[K].vEGPAFTDAIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.2051"	"0.0000"	"1"	"1"	"1"	"702.88763"	"1404.76799"	"1404.76845"	"-0.32"	"-0.00023"	"8/92"	"8"	"92"	"1472861.77313232"	"HCD"	"MS2"	"2.447721"	"74.0"	"100.000"	"73.8523"	"24997"	"24997"	"24978"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"98.2"	""	"89.2"	""	"95.2"	""	"129.1"	""	"152.7"	"143.0"	""	"981"	"39"	"36.000"	"29.000"	"0.00618926405716724"	""	"0"	"4.021E-05"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGPAFTDAIR"	"[K].vEGPAFTDAIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.7833"	"0.0000"	"1"	"1"	"1"	"702.88770"	"1404.76811"	"1404.76845"	"-0.24"	"-0.00017"	"10/92"	"10"	"92"	"5151104.58154297"	"HCD"	"MS2"	"0"	"208.6"	"100.000"	"74.0149"	"25077"	"25077"	"25060"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"273.4"	""	"271.4"	""	"291.6"	""	"335.6"	""	"384.5"	"422.9"	""	"981"	"61"	"36.000"	"29.000"	"4.37158585154602E-05"	"29"	"0"	"1.735E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFEQPLAISR"	"[K].dFEQPLAISR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"702.88776"	"1404.76824"	"1404.76845"	"-0.15"	"-0.00010"	"5/100"	"5"	"100"	"390373.573791504"	"HCD"	"MS2"	"25.29894"	"24.5"	"100.000"	"75.0426"	"25475"	"25475"	"25457"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.9"	""	"24.2"	""	"25.5"	""	"50.0"	""	"52.4"	"57.0"	""	"973"	"23"	"36.000"	"29.000"	"0.254731612398967"	"22"	"0.001374"	"0.01677"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGPAFTDAIR"	"[K].vEGPAFTDAIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"702.88776"	"1404.76824"	"1404.76845"	"-0.15"	"-0.00010"	"10/92"	"10"	"92"	"5219092.21069336"	"HCD"	"MS2"	"0"	"114.3"	"100.000"	"74.1362"	"25113"	"25113"	"25098"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"156.4"	""	"154.4"	""	"156.8"	""	"176.5"	"0.9"	"222.8"	"215.7"	""	"973"	"62"	"36.000"	"29.000"	"3.38908799114889E-05"	""	"0"	"2.017E-05"	"0.837"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGPAFTDAIR"	"[K].vEGPAFTDAIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"702.88788"	"1404.76848"	"1404.76845"	"0.02"	"0.00002"	"8/92"	"8"	"92"	"594663.849975586"	"HCD"	"MS2"	"0"	"35.0"	"100.000"	"74.4381"	"25235"	"25235"	"25217"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.6"	""	"43.8"	""	"50.2"	""	"59.0"	"1.2"	"66.4"	"61.9"	""	"962"	"48"	"36.000"	"29.000"	"0.000824413464911554"	"28"	"0"	"0.001709"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEFLIQASPR"	"[R].dEFLIQASPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"0.0732"	"0.0000"	"1"	"1"	"1"	"702.88818"	"1404.76909"	"1404.76845"	"0.46"	"0.00032"	"8/94"	"8"	"94"	"1745208.67474365"	"HCD"	"MS2"	"0"	"85.4"	"100.000"	"73.7218"	"24957"	"24957"	"24939"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.8"	""	"106.6"	""	"109.2"	""	"147.9"	""	"169.8"	"173.8"	""	"985"	"41"	"36.000"	"29.000"	"0.00430929509299513"	""	"0"	"0.000584"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSAEINEIIR"	"[K].mSAEINEIIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"702.88879"	"1404.77031"	"1404.77182"	"-1.07"	"-0.00075"	"11/90"	"11"	"90"	"226555.59753418"	"HCD"	"MS2"	"8.964626"	"13.8"	"100.000"	"87.6320"	"30507"	"30507"	"30497"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.1"	""	"18.7"	""	"22.5"	""	"18.9"	""	"22.6"	"28.0"	""	"954"	"15"	"36.000"	"29.000"	"1.41748469713904"	"18"	"0.007627"	"0.09204"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSAEINEIIR"	"[K].mSAEINEIIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"702.88953"	"1404.77178"	"1404.77182"	"-0.03"	"-0.00002"	"7/90"	"7"	"90"	"186421.976013184"	"HCD"	"MS2"	"10.70798"	"11.0"	"100.000"	"87.5743"	"30479"	"30479"	"30461"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.3"	""	"19.3"	""	"12.7"	""	"13.6"	""	"19.2"	"24.0"	""	"956"	"38"	"36.000"	"29.000"	"0.0069570944051818"	"17"	"0.0001301"	"0.004358"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVQMTEAEVR"	"[K].iVQMTEAEVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62142"	"Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"P62142"	"Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"702.88971"	"1404.77214"	"1404.77182"	"0.23"	"0.00016"	"7/92"	"7"	"92"	"1060807.87164307"	"HCD"	"MS2"	"23.57867"	"38.5"	"100.000"	"70.1788"	"23515"	"23515"	"23499"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"51.8"	""	"59.1"	""	"58.4"	""	"50.6"	""	"70.4"	"77.6"	""	"965"	"40"	"36.000"	"29.000"	"0.00480283113872112"	"22"	"0"	"0.0006387"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVQMTEAEVR"	"[K].iVQMTEAEVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62142"	"Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"P62142"	"Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"702.88989"	"1404.77251"	"1404.77182"	"0.49"	"0.00035"	"8/92"	"8"	"92"	"955928.432739258"	"HCD"	"MS2"	"39.09623"	"37.4"	"100.000"	"70.2869"	"23545"	"23545"	"23525"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.0"	""	"48.9"	""	"65.2"	""	"47.8"	"2.3"	"71.0"	"67.5"	""	"954"	"38"	"36.000"	"29.000"	"0.00700677834436125"	"16"	"0"	"0.0002107"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVQTNDLK"	"[R].eVQTNDLk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"3"	"3"	"0.5526"	"0.0000"	"1"	"1"	"1"	"468.94080"	"1404.80783"	"1404.80987"	"-1.45"	"-0.00068"	"10/76"	"10"	"76"	"5022207.68878174"	"HCD"	"MS2"	"13.55665"	"170.2"	"100.000"	"45.2612"	"13407"	"13407"	"13383"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"259.8"	""	"228.9"	""	"287.1"	""	"267.6"	""	"300.4"	"266.6"	""	"911"	"38"	"36.000"	"29.000"	"0.00726922951566332"	""	"0.001211"	"0.015"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVQTNDLK"	"[R].eVQTNDLk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.5800"	"0.0000"	"1"	"1"	"1"	"702.90814"	"1404.80901"	"1404.80987"	"-0.61"	"-0.00043"	"14/76"	"14"	"76"	"2537896.7298584"	"HCD"	"MS2"	"20.92879"	"209.5"	"100.000"	"45.3052"	"13414"	"13414"	"13387"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"335.9"	""	"338.0"	""	"316.3"	""	"329.1"	""	"366.2"	"296.7"	""	"931"	"50"	"36.000"	"29.000"	"0.000506896958446713"	""	"0"	"0.002879"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVQTNDLK"	"[R].eVQTNDLk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"3"	"3"	"0.2759"	"0.0000"	"1"	"1"	"1"	"468.94122"	"1404.80912"	"1404.80987"	"-0.53"	"-0.00025"	"9/76"	"9"	"76"	"5375405.9654541"	"HCD"	"MS2"	"8.157495"	"181.8"	"100.000"	"45.4776"	"13484"	"13484"	"13463"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"267.9"	""	"276.5"	""	"269.5"	""	"302.3"	""	"326.8"	"277.8"	""	"938"	"29"	"36.000"	"29.000"	"0.0601413043265674"	""	"0.001635"	"0.01963"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EVQTNDLK"	"[R].eVQTNDLk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"702.90820"	"1404.80913"	"1404.80987"	"-0.52"	"-0.00037"	"9/76"	"9"	"76"	"412761.608703613"	"HCD"	"MS2"	"20.66858"	"37.4"	"100.000"	"45.7445"	"13604"	"13604"	"13582"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.5"	""	"44.1"	""	"47.7"	""	"58.3"	"1.4"	"70.2"	"68.7"	""	"938"	"16"	"36.000"	"29.000"	"1.11217426795532"	"28"	"0.007808"	"0.09597"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVQTNDLK"	"[R].eVQTNDLk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"702.90820"	"1404.80913"	"1404.80987"	"-0.52"	"-0.00037"	"14/76"	"14"	"76"	"2345505.47814941"	"HCD"	"MS2"	"22.08054"	"186.9"	"100.000"	"45.1531"	"13363"	"13363"	"13335"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"298.8"	""	"294.8"	""	"295.8"	""	"306.0"	""	"308.7"	"263.0"	""	"938"	"50"	"36.000"	"29.000"	"0.000497935216326202"	""	"0"	"0.002916"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVQTNDLK"	"[R].eVQTNDLk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"702.90820"	"1404.80913"	"1404.80987"	"-0.52"	"-0.00037"	"14/76"	"14"	"76"	"4370389.40454102"	"HCD"	"MS2"	"0"	"327.4"	"100.000"	"45.4339"	"13478"	"13478"	"13461"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"450.8"	""	"475.9"	""	"523.0"	""	"506.1"	"1.0"	"614.5"	"528.4"	""	"938"	"46"	"36.000"	"29.000"	"0.00132182159476303"	""	"0.0003538"	"0.006242"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVQTNDLK"	"[R].eVQTNDLk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.4894"	"0.0000"	"1"	"1"	"1"	"702.90863"	"1404.80998"	"1404.80987"	"0.08"	"0.00006"	"14/76"	"14"	"76"	"3805412.56524658"	"HCD"	"MS2"	"0"	"294.6"	"100.000"	"45.5950"	"13532"	"13532"	"13517"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"418.0"	""	"428.2"	""	"463.0"	""	"468.3"	""	"537.1"	"473.6"	""	"939"	"47"	"36.000"	"29.000"	"0.000852384603671988"	""	"0.0001301"	"0.004934"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQEVSILK"	"[R].eqEVSILk.[K]"	"N-Term(TMT6plex); Q2(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"3"	"702.92053"	"1404.83379"	"1404.83502"	"-0.88"	"-0.00061"	"5/76"	"5"	"76"	"154804.709655762"	"HCD"	"MS2"	"30.22867"	"13.6"	"100.000"	"84.5377"	"29289"	"29289"	"29270"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.3"	""	"11.1"	""	"18.2"	""	"20.7"	""	"34.4"	"31.1"	""	"813"	"17"	"36.000"	"29.000"	"0.762185267529405"	"24"	"0.008837"	"0.1154"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAETMNNIDR"	"[K].lAETMNNIDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2HWF0"	"Formin-binding protein 1-like OS=Rattus norvegicus OX=10116 GN=Fnbp1l PE=1 SV=2"	"Q2HWF0"	"Formin-binding protein 1-like OS=Rattus norvegicus OX=10116 GN=Fnbp1l PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"703.36975"	"1405.73223"	"1405.73068"	"1.10"	"0.00077"	"6/92"	"6"	"92"	"325207.164916992"	"HCD"	"MS2"	"0"	"28.6"	"100.000"	"60.2433"	"19482"	"19482"	"19463"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.3"	""	"27.6"	""	"33.9"	""	"43.7"	"0.8"	"68.7"	"64.9"	""	"780"	"34"	"35.000"	"28.000"	"0.0165601629939062"	"17"	"0.0001301"	"0.004222"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IISTTNGGQER"	"[R].iISTTnGGQER.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"703.37720"	"1405.74712"	"1405.74844"	"-0.94"	"-0.00066"	"6/104"	"6"	"104"	"501895.277587891"	"HCD"	"MS2"	"28.35611"	"38.3"	"100.000"	"40.9682"	"11655"	"11655"	"11630"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.5"	""	"45.1"	""	"52.0"	""	"54.9"	"0.0"	"74.5"	"82.6"	""	"868"	"24"	"36.000"	"29.000"	"0.172381132469737"	"17"	"0"	"0.003793"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPSSSPASLSR"	"[K].tSPSSSPASLSR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P19836"	"Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus OX=10116 GN=Pcyt1a PE=1 SV=2"	"P19836"	"Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus OX=10116 GN=Pcyt1a PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"703.37793"	"1405.74858"	"1405.74844"	"0.10"	"0.00007"	"10/108"	"10"	"108"	"831474.918640137"	"HCD"	"MS2"	"31.0863"	"44.9"	"100.000"	"30.9691"	"7608"	"7608"	"7593"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.0"	""	"56.7"	""	"59.8"	""	"74.7"	""	"78.4"	"83.4"	""	"855"	"49"	"36.000"	"29.000"	"0.000505750265072508"	"23"	"0"	"0.00235"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPSSSPASLSR"	"[K].tSPSSSPASLSR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P19836"	"Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus OX=10116 GN=Pcyt1a PE=1 SV=2"	"P19836"	"Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus OX=10116 GN=Pcyt1a PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"703.37830"	"1405.74932"	"1405.74844"	"0.62"	"0.00044"	"8/108"	"8"	"108"	"909671.390991211"	"HCD"	"MS2"	"16.19725"	"46.0"	"100.000"	"31.0475"	"7629"	"7629"	"7604"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"74.1"	""	"60.3"	""	"56.7"	""	"78.1"	"2.1"	"82.1"	"81.8"	""	"852"	"44"	"36.000"	"29.000"	"0.00165352055912016"	"23"	"0"	"0.00261"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGLHLSEHIR"	"[R].nGLHLSEHIR.[N]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"0"	"4"	"4"	"0.3333"	"0.0000"	"1"	"1"	"3"	"352.19839"	"1405.77175"	"1405.77493"	"-2.26"	"-0.00079"	"10/92"	"10"	"92"	"1077655.65472412"	"HCD"	"MS2"	"45.27057"	"57.9"	"100.000"	"39.9743"	"11260"	"11260"	"11236"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.4"	""	"71.6"	""	"66.0"	""	"99.9"	""	"120.5"	"116.6"	""	"919"	"12"	"36.000"	"29.000"	"3.1570794818654"	"21"	"0.0006732"	"0.008897"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVMPEVNK"	"[K].dVmPEVNk.[V]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"703.38971"	"1405.77214"	"1405.77612"	"-2.83"	"-0.00199"	"6/66"	"6"	"66"	"784228.793884277"	"HCD"	"MS2"	"27.76177"	"57.5"	"100.000"	"44.2931"	"13014"	"13014"	"12989"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.4"	""	"46.6"	""	"67.7"	""	"108.8"	""	"113.2"	"146.7"	""	"955"	"27"	"36.000"	"29.000"	"0.104465617543591"	"23"	"0.009594"	"0.1267"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVMPEVNK"	"[K].dVmPEVNk.[V]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"703.39014"	"1405.77300"	"1405.77612"	"-2.22"	"-0.00156"	"7/66"	"7"	"66"	"702087.22253418"	"HCD"	"MS2"	"34.14799"	"49.2"	"100.000"	"44.4281"	"13057"	"13057"	"13033"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.3"	""	"41.2"	""	"57.2"	""	"106.3"	""	"90.8"	"121.8"	""	"943"	"26"	"36.000"	"29.000"	"0.127198414239778"	"18"	"0.008668"	"0.111"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLTEEAK"	"[K].eQLTEEAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6TUG0"	"DnaJ homolog subfamily B member 11 OS=Rattus norvegicus OX=10116 GN=Dnajb11 PE=2 SV=1"	"Q6TUG0"	"DnaJ homolog subfamily B member 11 OS=Rattus norvegicus OX=10116 GN=Dnajb11 PE=2 SV=1"	"0"	"2"	"2"	"0.4681"	"0.0000"	"1"	"1"	"1"	"703.39996"	"1405.79265"	"1405.79388"	"-0.88"	"-0.00062"	"14/78"	"14"	"78"	"794728.940917969"	"HCD"	"MS2"	"0"	"69.1"	"100.000"	"42.5233"	"12287"	"12287"	"12261"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"99.2"	""	"63.5"	""	"81.2"	""	"126.9"	"1.4"	"139.0"	"145.1"	""	"969"	"47"	"36.000"	"29.000"	"0.00105267372115948"	""	"0"	"0.001537"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLTEEAK"	"[K].eQLTEEAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6TUG0"	"DnaJ homolog subfamily B member 11 OS=Rattus norvegicus OX=10116 GN=Dnajb11 PE=2 SV=1"	"Q6TUG0"	"DnaJ homolog subfamily B member 11 OS=Rattus norvegicus OX=10116 GN=Dnajb11 PE=2 SV=1"	"0"	"2"	"2"	"0.4255"	"0.0000"	"1"	"1"	"1"	"703.40051"	"1405.79375"	"1405.79388"	"-0.09"	"-0.00007"	"14/78"	"14"	"78"	"840641.431945801"	"HCD"	"MS2"	"0"	"69.7"	"100.000"	"42.3943"	"12245"	"12245"	"12220"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.3"	""	"62.5"	""	"82.3"	""	"121.6"	""	"141.1"	"149.6"	""	"977"	"47"	"36.000"	"29.000"	"0.00109110003085271"	""	"0"	"0.002446"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGVDDAANFR"	"[K].vNGVDDAANFR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.8226"	"0.0000"	"1"	"1"	"1"	"703.86481"	"1406.72234"	"1406.72256"	"-0.16"	"-0.00011"	"9/100"	"9"	"100"	"1630378.77789307"	"HCD"	"MS2"	"4.795369"	"103.2"	"100.000"	"54.4909"	"17167"	"17167"	"17145"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"138.2"	""	"141.9"	""	"129.5"	""	"166.3"	"0.1"	"201.4"	"200.9"	""	"734"	"62"	"35.000"	"28.000"	"2.12161249397898E-05"	"28"	"0"	"6.15E-06"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGVDDAANFR"	"[K].vNGVDDAANFR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"703.86487"	"1406.72246"	"1406.72256"	"-0.07"	"-0.00005"	"9/100"	"9"	"100"	"1777210.87567139"	"HCD"	"MS2"	"4.537119"	"106.6"	"100.000"	"54.7392"	"17255"	"17255"	"17232"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"127.1"	""	"132.5"	""	"136.9"	""	"175.6"	""	"210.3"	"229.5"	""	"734"	"66"	"35.000"	"28.000"	"8.44629146988924E-06"	"25"	"0"	"6.467E-06"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVTSVDAAFR"	"[K].nPVTSVDAAFR.[G]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"703.87701"	"1406.74675"	"1406.74771"	"-0.68"	"-0.00048"	"8/106"	"8"	"106"	"361986.842773438"	"HCD"	"MS2"	"38.986"	"21.5"	"100.000"	"76.1079"	"25917"	"25917"	"25898"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.4"	""	"33.3"	""	"33.4"	""	"32.7"	""	"29.3"	"31.6"	""	"888"	"31"	"36.000"	"29.000"	"0.032762947817732"	"19"	"0.0008629"	"0.009588"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVTSVDAAFR"	"[K].nPVTSVDAAFR.[G]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"703.87708"	"1406.74687"	"1406.74771"	"-0.59"	"-0.00042"	"8/106"	"8"	"106"	"450723.257263184"	"HCD"	"MS2"	"49.95205"	"25.5"	"100.000"	"76.1549"	"25927"	"25927"	"25903"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.6"	""	"37.9"	""	"36.5"	""	"40.9"	""	"36.2"	"34.1"	""	"879"	"28"	"36.000"	"29.000"	"0.0703005753576146"	"16"	"0.0001301"	"0.00457"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDTEDIEK"	"[K].vDTEDIEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"703.89227"	"1406.77727"	"1406.77790"	"-0.45"	"-0.00031"	"14/66"	"14"	"66"	"1519452.99163818"	"HCD"	"MS2"	"8.152579"	"128.7"	"100.000"	"55.3869"	"17532"	"17532"	"17511"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"198.2"	""	"119.9"	""	"161.7"	""	"221.0"	""	"261.7"	"258.6"	""	"968"	"47"	"36.000"	"29.000"	"0.000892987462882864"	"29"	"0"	"0.001822"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDDLEDK"	"[K].tIDDLEDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"0"	"2"	"2"	"0.6591"	"0.0000"	"1"	"1"	"1"	"703.89227"	"1406.77727"	"1406.77790"	"-0.45"	"-0.00031"	"7/68"	"7"	"68"	"2853953.51068115"	"HCD"	"MS2"	"6.486692"	"234.4"	"100.000"	"65.2457"	"21505"	"21505"	"21485"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"216.0"	""	"200.3"	""	"228.8"	""	"486.6"	""	"565.7"	"537.5"	""	"968"	"44"	"36.000"	"29.000"	"0.00208855233184638"	""	"0.0001301"	"0.004911"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDTEDIEK"	"[K].vDTEDIEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"703.89240"	"1406.77751"	"1406.77790"	"-0.27"	"-0.00019"	"14/66"	"14"	"66"	"1253077.45111084"	"HCD"	"MS2"	"9.741517"	"110.7"	"100.000"	"55.5685"	"17592"	"17592"	"17570"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"178.8"	""	"107.2"	""	"136.2"	""	"186.9"	""	"225.8"	"215.3"	""	"963"	"49"	"36.000"	"29.000"	"0.000586943491882323"	"29"	"0"	"0.001945"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDDLEDK"	"[K].tIDDLEDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"703.89252"	"1406.77776"	"1406.77790"	"-0.10"	"-0.00007"	"7/68"	"7"	"68"	"1295887.90362549"	"HCD"	"MS2"	"0"	"111.5"	"100.000"	"65.6319"	"21647"	"21647"	"21629"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.3"	""	"86.3"	""	"103.8"	""	"213.7"	""	"285.4"	"286.6"	""	"963"	"42"	"36.000"	"29.000"	"0.00322549439434057"	""	"0"	"0.003055"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDDLEDK"	"[K].tIDDLEDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"0"	"2"	"2"	"0.6341"	"0.0000"	"1"	"1"	"1"	"703.89252"	"1406.77776"	"1406.77790"	"-0.10"	"-0.00007"	"7/68"	"7"	"68"	"2449225.84356689"	"HCD"	"MS2"	"5.080683"	"202.8"	"100.000"	"65.3207"	"21520"	"21520"	"21502"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"185.0"	""	"167.8"	""	"205.4"	""	"415.3"	""	"497.1"	"464.2"	""	"963"	"41"	"36.000"	"29.000"	"0.00347213251226566"	""	"0.0001301"	"0.004338"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDDLEDK"	"[K].tIDDLEDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"703.89270"	"1406.77812"	"1406.77790"	"0.16"	"0.00011"	"7/68"	"7"	"68"	"1456882.98638916"	"HCD"	"MS2"	"0"	"120.3"	"100.000"	"65.5382"	"21625"	"21625"	"21609"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.3"	""	"89.3"	""	"113.3"	""	"250.7"	""	"305.1"	"301.9"	""	"965"	"42"	"36.000"	"29.000"	"0.00305842135681468"	""	"0"	"0.003341"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.34192"	"1407.67656"	"1407.67758"	"-0.72"	"-0.00051"	"7/80"	"7"	"80"	"1844978.5213623"	"HCD"	"MS2"	"42.75241"	"87.7"	"100.000"	"49.8115"	"15261"	"15261"	"15238"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.3"	""	"90.6"	""	"86.0"	""	"253.9"	"1.8"	"169.6"	"141.2"	""	"495"	"17"	"33.000"	"26.000"	"0.458749076795166"	"14"	"0.0006732"	"0.009256"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"704.34241"	"1407.67754"	"1407.67758"	"-0.03"	"-0.00002"	"9/80"	"9"	"80"	"3489436.36602783"	"HCD"	"MS2"	"4.878818"	"156.0"	"100.000"	"50.5145"	"15536"	"15536"	"15518"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"129.9"	""	"145.0"	""	"130.0"	""	"530.1"	""	"316.1"	"229.9"	""	"507"	"42"	"34.000"	"27.000"	"0.00144536643023169"	"17"	"0"	"0.001316"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"704.34247"	"1407.67766"	"1407.67758"	"0.06"	"0.00004"	"7/80"	"7"	"80"	"3999104.06469727"	"HCD"	"MS2"	"3.968813"	"167.1"	"100.000"	"50.0995"	"15379"	"15379"	"15366"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"146.7"	""	"151.2"	""	"135.5"	""	"569.6"	""	"317.3"	"266.8"	""	"511"	"39"	"34.000"	"27.000"	"0.00298807094405577"	"17"	"0"	"0.002592"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"704.34253"	"1407.67778"	"1407.67758"	"0.14"	"0.00010"	"7/80"	"7"	"80"	"2421472.46282959"	"HCD"	"MS2"	"36.68109"	"110.0"	"100.000"	"50.2131"	"15413"	"15413"	"15390"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"109.7"	""	"107.0"	""	"90.1"	""	"349.2"	"3.4"	"210.2"	"174.4"	""	"511"	"36"	"34.000"	"27.000"	"0.00589373906717978"	"17"	"0"	"0.003667"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"704.34259"	"1407.67790"	"1407.67758"	"0.23"	"0.00016"	"13/80"	"13"	"80"	"733059.794921875"	"HCD"	"MS2"	"8.019348"	"54.6"	"100.000"	"50.8110"	"15657"	"15657"	"15636"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.2"	""	"49.2"	""	"57.7"	""	"139.1"	"0.6"	"103.0"	"100.4"	""	"511"	"19"	"34.000"	"27.000"	"0.343076447570724"	"16"	"0.0004639"	"0.007988"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.34265"	"1407.67803"	"1407.67758"	"0.32"	"0.00022"	"13/80"	"13"	"80"	"843694.105224609"	"HCD"	"MS2"	"7.034684"	"56.1"	"100.000"	"50.4098"	"15504"	"15504"	"15490"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.4"	""	"56.7"	""	"54.8"	""	"159.6"	""	"119.3"	"90.8"	""	"512"	"31"	"34.000"	"27.000"	"0.022451221021277"	"14"	"0.0001301"	"0.004433"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGVDDAANFR"	"[K].vnGVDDAANFR.[T]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"704.35278"	"1407.69829"	"1407.70657"	"-5.88"	"-0.00414"	"9/100"	"9"	"100"	"1309715.97570801"	"HCD"	"MS2"	"24.47899"	"82.3"	"100.000"	"59.7550"	"19300"	"19300"	"19270"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"102.3"	""	"111.2"	""	"116.4"	""	"120.6"	""	"169.4"	"161.9"	""	"623"	"63"	"34.000"	"27.000"	"1.68057558913462E-05"	"20"	"0"	"7.021E-06"	"0.936"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGVDDAANFR"	"[K].vnGVDDAANFR.[T]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"704.35522"	"1407.70317"	"1407.70657"	"-2.42"	"-0.00170"	"9/100"	"9"	"100"	"583152.92388916"	"HCD"	"MS2"	"39.26043"	"37.1"	"100.000"	"58.7813"	"18902"	"18902"	"18872"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.1"	""	"38.3"	""	"47.4"	""	"69.1"	"1.0"	"73.2"	"66.5"	""	"649"	"50"	"35.000"	"28.000"	"0.000358273512158223"	"22"	"0"	"8.116E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGVDDAANFR"	"[K].vnGVDDAANFR.[T]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.9403"	"0.0000"	"1"	"1"	"1"	"704.35638"	"1407.70549"	"1407.70657"	"-0.77"	"-0.00054"	"9/100"	"9"	"100"	"1327481.45306396"	"HCD"	"MS2"	"0"	"81.7"	"100.000"	"59.5022"	"19211"	"19211"	"19190"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"97.9"	""	"115.5"	""	"107.7"	""	"122.6"	"1.3"	"157.1"	"173.7"	""	"666"	"67"	"35.000"	"28.000"	"6.97339447798346E-06"	"21"	"0"	"3.82E-06"	"0.994"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGVDDAANFR"	"[K].vnGVDDAANFR.[T]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"704.35663"	"1407.70598"	"1407.70657"	"-0.42"	"-0.00030"	"9/100"	"9"	"100"	"659912.322570801"	"HCD"	"MS2"	"15.3998"	"42.8"	"100.000"	"58.5953"	"18841"	"18841"	"18815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.6"	""	"48.0"	""	"55.4"	""	"78.5"	"1.5"	"86.3"	"78.5"	""	"677"	"47"	"35.000"	"28.000"	"0.000683217014106208"	"22"	"0"	"0.0001441"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTASPLEEER"	"[R].fTASPLEEER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.36853"	"1407.72978"	"1407.73173"	"-1.38"	"-0.00097"	"9/86"	"9"	"86"	"224583.832824707"	"HCD"	"MS2"	"0"	"17.5"	"100.000"	"62.7286"	"20471"	"20471"	"20442"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.1"	""	"25.6"	""	"22.8"	""	"31.1"	""	"30.2"	"25.2"	""	"817"	"10"	"36.000"	"29.000"	"4.4688117562215"	"13"	"0.005119"	"0.05832"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTASPLEEER"	"[R].fTASPLEEER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"704.36859"	"1407.72991"	"1407.73173"	"-1.29"	"-0.00091"	"7/86"	"7"	"86"	"2022505.50097656"	"HCD"	"MS2"	"0"	"104.5"	"100.000"	"62.0931"	"20216"	"20216"	"20201"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"185.1"	""	"135.9"	""	"141.0"	""	"173.1"	""	"186.1"	"173.9"	""	"817"	"49"	"36.000"	"29.000"	"0.000570416475491351"	"21"	"0"	"5.862E-05"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTASPLEEER"	"[R].fTASPLEEER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"704.36896"	"1407.73064"	"1407.73173"	"-0.77"	"-0.00054"	"7/86"	"7"	"86"	"3482127.33502197"	"HCD"	"MS2"	"0"	"164.0"	"100.000"	"62.2007"	"20272"	"20272"	"20263"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"268.0"	""	"194.7"	""	"232.8"	""	"267.0"	""	"290.8"	"300.5"	""	"832"	"47"	"36.000"	"29.000"	"0.00085722204392032"	"21"	"0"	"6.743E-05"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTASPLEEER"	"[R].fTASPLEEER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"704.36908"	"1407.73088"	"1407.73173"	"-0.60"	"-0.00042"	"7/86"	"7"	"86"	"2338634.12176514"	"HCD"	"MS2"	"0"	"120.1"	"100.000"	"62.3885"	"20332"	"20332"	"20315"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"206.8"	""	"142.1"	""	"158.1"	""	"193.0"	"0.4"	"223.6"	"213.4"	""	"835"	"49"	"36.000"	"29.000"	"0.000573662524567726"	"22"	"0"	"9.924E-05"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTASPLEEER"	"[R].fTASPLEEER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"704.36938"	"1407.73149"	"1407.73173"	"-0.17"	"-0.00012"	"7/86"	"7"	"86"	"1307707.9519043"	"HCD"	"MS2"	"0"	"76.4"	"100.000"	"61.9303"	"20165"	"20165"	"20153"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"117.6"	""	"97.2"	""	"117.3"	""	"129.1"	""	"142.6"	"123.7"	""	"850"	"48"	"36.000"	"29.000"	"0.000624293667998644"	"18"	"0"	"6.984E-05"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTASPLEEER"	"[R].fTASPLEEER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"704.36945"	"1407.73161"	"1407.73173"	"-0.08"	"-0.00006"	"7/86"	"7"	"86"	"337692.305541992"	"HCD"	"MS2"	"10.70278"	"24.3"	"100.000"	"62.5175"	"20401"	"20401"	"20375"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.6"	""	"33.2"	""	"34.7"	""	"38.4"	"1.4"	"48.5"	"42.9"	""	"845"	"47"	"36.000"	"29.000"	"0.00087867185030131"	"18"	"0"	"0.003566"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENQTAVDVFR"	"[K].eNQTAVDVFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"704.37433"	"1407.74138"	"1407.74296"	"-1.12"	"-0.00079"	"8/100"	"8"	"100"	"691053.188415527"	"HCD"	"MS2"	"16.49717"	"42.0"	"100.000"	"57.4755"	"18369"	"18369"	"18351"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.3"	""	"58.3"	""	"63.7"	""	"60.3"	""	"80.1"	"70.1"	""	"870"	"32"	"36.000"	"29.000"	"0.0245747584043352"	"18"	"0"	"0.0004369"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENQTAVDVFR"	"[K].eNQTAVDVFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"0"	"2"	"2"	"0.7636"	"0.0000"	"1"	"1"	"1"	"704.37445"	"1407.74162"	"1407.74296"	"-0.95"	"-0.00067"	"8/100"	"8"	"100"	"1463260.33483887"	"HCD"	"MS2"	"14.60858"	"82.3"	"100.000"	"56.9832"	"18183"	"18183"	"18163"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"139.4"	""	"141.9"	""	"138.7"	""	"112.6"	""	"135.9"	"113.1"	""	"868"	"55"	"36.000"	"29.000"	"0.000145040647371334"	"29"	"0"	"6.116E-05"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENQTAVDVFR"	"[K].eNQTAVDVFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"704.37463"	"1407.74199"	"1407.74296"	"-0.69"	"-0.00048"	"9/100"	"9"	"100"	"715045.517700195"	"HCD"	"MS2"	"15.5385"	"43.7"	"100.000"	"57.2755"	"18302"	"18302"	"18281"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.6"	""	"63.9"	""	"73.3"	""	"63.5"	""	"77.9"	"75.8"	""	"865"	"32"	"36.000"	"29.000"	"0.0266677338305091"	"19"	"0"	"0.0009144"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENQTAVDVFR"	"[K].eNQTAVDVFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"0"	"2"	"2"	"0.6889"	"0.0000"	"1"	"1"	"1"	"704.37488"	"1407.74248"	"1407.74296"	"-0.34"	"-0.00024"	"8/100"	"8"	"100"	"1422561.2286377"	"HCD"	"MS2"	"15.51994"	"80.1"	"100.000"	"57.1669"	"18244"	"18244"	"18222"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"126.4"	""	"136.9"	""	"127.0"	""	"107.3"	""	"139.8"	"124.2"	""	"877"	"45"	"36.000"	"29.000"	"0.00139948934946168"	""	"0"	"7.552E-05"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SWEGDDIK"	"[R].sWEGDDIk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O55043"	"Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"O55043"	"Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"704.38007"	"1407.75286"	"1407.75202"	"0.60"	"0.00042"	"12/66"	"12"	"66"	"1303947.32513428"	"HCD"	"MS2"	"2.008397"	"111.7"	"100.000"	"61.4109"	"19939"	"19939"	"19921"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"141.9"	""	"130.6"	""	"159.8"	""	"191.9"	""	"220.6"	"214.5"	""	"924"	"29"	"36.000"	"29.000"	"0.053044697313156"	"29"	"0.0008629"	"0.01027"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SWEGDDIK"	"[R].sWEGDDIk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O55043"	"Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"O55043"	"Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"704.38031"	"1407.75334"	"1407.75202"	"0.94"	"0.00066"	"12/66"	"12"	"66"	"1418449.77862549"	"HCD"	"MS2"	"0"	"122.9"	"100.000"	"61.2574"	"19892"	"19892"	"19873"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"165.9"	""	"136.6"	""	"172.0"	""	"194.7"	""	"254.0"	"244.1"	""	"922"	"32"	"36.000"	"29.000"	"0.0268349583392372"	""	"0.0006732"	"0.009296"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQTQLIQR"	"[R].eYQTQLIQR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"704.39331"	"1407.77934"	"1407.77934"	"0.00"	"0.00000"	"7/82"	"7"	"82"	"853382.339782715"	"HCD"	"MS2"	"40.1421"	"56.1"	"100.000"	"49.4958"	"15132"	"15132"	"15110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"82.9"	""	"63.0"	""	"70.0"	""	"102.2"	"0.4"	"108.7"	"104.7"	""	"927"	"41"	"36.000"	"29.000"	"0.00392689906454167"	"25"	"0"	"0.000676"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQTQLIQR"	"[R].eYQTQLIQR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"704.39331"	"1407.77934"	"1407.77934"	"0.00"	"0.00000"	"6/82"	"6"	"82"	"1030524.23724365"	"HCD"	"MS2"	"54.12463"	"66.0"	"100.000"	"49.8695"	"15273"	"15273"	"15246"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"102.0"	""	"74.5"	""	"85.3"	""	"111.7"	""	"130.8"	"121.9"	""	"927"	"40"	"36.000"	"29.000"	"0.00515287655595018"	"22"	"0"	"0.0004512"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVVESSEK"	"[R].aTVVESSEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.6744"	"0.0000"	"1"	"1"	"1"	"469.93997"	"1407.80536"	"1407.80953"	"-2.96"	"-0.00139"	"11/76"	"11"	"76"	"4317045.72052002"	"HCD"	"MS2"	"25.15369"	"143.2"	"100.000"	"38.8547"	"10803"	"10803"	"10780"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"202.9"	""	"180.5"	""	"192.7"	""	"243.5"	"1.5"	"267.3"	"269.2"	""	"841"	"43"	"36.000"	"29.000"	"0.0021966759747413"	"29"	"0.000936"	"0.01136"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVVESSEK"	"[R].aTVVESSEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"704.40753"	"1407.80779"	"1407.80953"	"-1.24"	"-0.00087"	"14/76"	"14"	"76"	"4133711.78131104"	"HCD"	"MS2"	"10.55733"	"274.0"	"100.000"	"38.8179"	"10788"	"10788"	"10764"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"430.1"	""	"362.3"	""	"364.0"	""	"444.7"	"4.1"	"491.1"	"498.7"	""	"780"	"45"	"35.000"	"28.000"	"0.00125044503655713"	"28"	"0"	"0.000574"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVVESSEK"	"[R].aTVVESSEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"704.40771"	"1407.80815"	"1407.80953"	"-0.98"	"-0.00069"	"14/76"	"14"	"76"	"4479910.50994873"	"HCD"	"MS2"	"3.372921"	"297.8"	"100.000"	"39.0556"	"10876"	"10876"	"10853"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"468.8"	""	"390.0"	""	"408.6"	""	"488.1"	"2.2"	"523.3"	"538.0"	""	"810"	"45"	"36.000"	"29.000"	"0.00127777687246672"	"26"	"0"	"0.0008843"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVVESSEK"	"[R].aTVVESSEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.6957"	"0.0000"	"1"	"1"	"1"	"469.94104"	"1407.80857"	"1407.80953"	"-0.68"	"-0.00032"	"11/76"	"11"	"76"	"3405888.14019775"	"HCD"	"MS2"	"53.49257"	"117.9"	"100.000"	"39.0258"	"10864"	"10864"	"10837"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"171.8"	""	"152.9"	""	"152.3"	""	"205.5"	"1.2"	"218.3"	"215.6"	""	"808"	"46"	"36.000"	"29.000"	"0.00094706844138925"	"29"	"0.0001301"	"0.004645"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAEEITSK"	"[K].aTAEEITSk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"469.94131"	"1407.80939"	"1407.80953"	"-0.10"	"-0.00005"	"5/76"	"5"	"76"	"1425286.32574463"	"HCD"	"MS2"	"42.44681"	"53.3"	"100.000"	"46.7831"	"14015"	"14015"	"13996"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.5"	""	"52.5"	""	"58.9"	""	"105.5"	"1.8"	"109.7"	"102.0"	""	"807"	"19"	"36.000"	"29.000"	"0.527039953361199"	"17"	"0.0023"	"0.02288"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAEEITSK"	"[K].aTAEEITSk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"704.40875"	"1407.81023"	"1407.80953"	"0.50"	"0.00035"	"8/76"	"8"	"76"	"645169.331115723"	"HCD"	"MS2"	"0"	"56.4"	"100.000"	"46.4876"	"13896"	"13896"	"13868"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.3"	""	"86.2"	""	"75.0"	""	"85.5"	""	"89.9"	"109.1"	""	"811"	"54"	"36.000"	"29.000"	"0.000178234125060038"	"25"	"0"	"0.0001914"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAEEITSK"	"[K].aTAEEITSk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"704.40894"	"1407.81059"	"1407.80953"	"0.76"	"0.00053"	"8/76"	"8"	"76"	"953245.705810547"	"HCD"	"MS2"	"0"	"78.9"	"100.000"	"46.3267"	"13842"	"13842"	"13817"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"132.7"	""	"112.8"	""	"95.9"	""	"130.9"	"0.3"	"133.7"	"139.9"	""	"811"	"54"	"36.000"	"29.000"	"0.000165573511157907"	"20"	"0"	"0.0002739"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAEEITSK"	"[K].aTAEEITSk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"704.40942"	"1407.81157"	"1407.80953"	"1.45"	"0.00102"	"13/76"	"13"	"76"	"955690.471069336"	"HCD"	"MS2"	"0"	"74.2"	"100.000"	"46.6018"	"13952"	"13952"	"13942"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"111.8"	""	"104.7"	""	"99.1"	""	"133.0"	"1.0"	"123.1"	"129.4"	""	"824"	"44"	"36.000"	"29.000"	"0.00153425382976882"	"22"	"0"	"0.000438"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAEEITSK"	"[K].aTAEEITSk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"704.40955"	"1407.81182"	"1407.80953"	"1.62"	"0.00114"	"14/76"	"14"	"76"	"1147976.22180176"	"HCD"	"MS2"	"0"	"91.9"	"100.000"	"46.7650"	"14007"	"14007"	"13996"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"138.9"	""	"131.8"	""	"121.6"	""	"147.9"	""	"161.6"	"175.0"	""	"824"	"43"	"36.000"	"29.000"	"0.00230620131815985"	"23"	"0"	"0.000366"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTAAPTDPTDGP"	"[R].hTAAPTDPTDGP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P742"	"Proteolipid protein 2 OS=Rattus norvegicus OX=10116 GN=Plp2 PE=2 SV=1"	"Q6P742"	"Proteolipid protein 2 OS=Rattus norvegicus OX=10116 GN=Plp2 PE=2 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"704.84845"	"1408.68962"	"1408.69059"	"-0.69"	"-0.00048"	"10/106"	"10"	"106"	"641658.175231934"	"HCD"	"MS2"	"14.45135"	"26.3"	"100.000"	"29.2682"	"6921"	"6921"	"6896"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.5"	""	"23.2"	""	"27.0"	""	"29.1"	""	"47.6"	"96.4"	""	"511"	"18"	"34.000"	"27.000"	"0.372727043500352"	"22"	"0.0003538"	"0.006712"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTAAPTDPTDGP"	"[R].hTAAPTDPTDGP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P742"	"Proteolipid protein 2 OS=Rattus norvegicus OX=10116 GN=Plp2 PE=2 SV=1"	"Q6P742"	"Proteolipid protein 2 OS=Rattus norvegicus OX=10116 GN=Plp2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.84851"	"1408.68974"	"1408.69059"	"-0.60"	"-0.00042"	"12/106"	"12"	"106"	"790392.769592285"	"HCD"	"MS2"	"0"	"16.8"	"100.000"	"29.6729"	"7072"	"7072"	"7052"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.3"	""	"17.6"	""	"20.7"	""	"26.9"	""	"35.2"	"37.3"	""	"525"	"38"	"34.000"	"27.000"	"0.00456172717546711"	"15"	"0"	"0.0001312"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTAAPTDPTDGP"	"[R].hTAAPTDPTDGP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P742"	"Proteolipid protein 2 OS=Rattus norvegicus OX=10116 GN=Plp2 PE=2 SV=1"	"Q6P742"	"Proteolipid protein 2 OS=Rattus norvegicus OX=10116 GN=Plp2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.84851"	"1408.68974"	"1408.69059"	"-0.60"	"-0.00042"	"8/106"	"8"	"106"	"1152680.38659668"	"HCD"	"MS2"	"0"	"23.0"	"100.000"	"29.6679"	"7082"	"7082"	"7058"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.7"	""	"26.7"	""	"25.5"	""	"42.3"	""	"42.1"	"53.2"	""	"525"	"52"	"34.000"	"27.000"	"0.000175440278361761"	"16"	"0"	"7.199E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTAAPTDPTDGP"	"[R].hTAAPTDPTDGP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P742"	"Proteolipid protein 2 OS=Rattus norvegicus OX=10116 GN=Plp2 PE=2 SV=1"	"Q6P742"	"Proteolipid protein 2 OS=Rattus norvegicus OX=10116 GN=Plp2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.84863"	"1408.68999"	"1408.69059"	"-0.43"	"-0.00030"	"6/106"	"6"	"106"	"579370.596435547"	"HCD"	"MS2"	"0"	"21.4"	"100.000"	"30.0059"	"7208"	"7208"	"7181"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.8"	""	"20.7"	""	"29.3"	""	"44.7"	""	"41.9"	"45.4"	""	"529"	"21"	"34.000"	"27.000"	"0.203903967567542"	"14"	"0.000936"	"0.01318"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTAAPTDPTDGP"	"[R].hTAAPTDPTDGP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P742"	"Proteolipid protein 2 OS=Rattus norvegicus OX=10116 GN=Plp2 PE=2 SV=1"	"Q6P742"	"Proteolipid protein 2 OS=Rattus norvegicus OX=10116 GN=Plp2 PE=2 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"704.84869"	"1408.69011"	"1408.69059"	"-0.34"	"-0.00024"	"10/106"	"10"	"106"	"599972.34564209"	"HCD"	"MS2"	"14.14535"	"25.1"	"100.000"	"29.9849"	"7211"	"7211"	"7185"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.1"	""	"26.6"	""	"32.6"	""	"47.9"	""	"46.5"	"56.8"	""	"529"	"17"	"34.000"	"27.000"	"0.47799755632989"	"22"	"0.0006732"	"0.008415"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTAAPTDPTDGP"	"[R].hTAAPTDPTDGP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P742"	"Proteolipid protein 2 OS=Rattus norvegicus OX=10116 GN=Plp2 PE=2 SV=1"	"Q6P742"	"Proteolipid protein 2 OS=Rattus norvegicus OX=10116 GN=Plp2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.84949"	"1408.69170"	"1408.69059"	"0.79"	"0.00055"	"12/106"	"12"	"106"	"470537.020141602"	"HCD"	"MS2"	"0"	"20.7"	"100.000"	"29.3262"	"6932"	"6932"	"6907"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.6"	""	"23.3"	""	"27.7"	""	"30.9"	"1.6"	"43.1"	"45.8"	""	"538"	"37"	"34.000"	"27.000"	"0.00558151736195371"	"15"	"0"	"0.0003115"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEQESLEFGK"	"[M].aEQESLEFGk.[A]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"704.86047"	"1408.71367"	"1408.71574"	"-1.47"	"-0.00104"	"7/96"	"7"	"96"	"220000.49810791"	"HCD"	"MS2"	"26.76416"	"12.0"	"100.000"	"80.6994"	"27765"	"27765"	"27739"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.4"	""	"19.2"	""	"13.1"	""	"17.7"	""	"20.4"	"25.5"	""	"698"	"35"	"35.000"	"28.000"	"0.0108099933542659"	"19"	"0"	"0.001351"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEQESLEFGK"	"[M].aEQESLEFGk.[A]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"704.86096"	"1408.71465"	"1408.71574"	"-0.78"	"-0.00055"	"7/96"	"7"	"96"	"363646.032104492"	"HCD"	"MS2"	"0"	"17.2"	"100.000"	"80.7331"	"27778"	"27778"	"27751"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.3"	""	"25.0"	""	"22.2"	""	"29.7"	""	"31.6"	"32.5"	""	"706"	"41"	"35.000"	"28.000"	"0.0028495396567784"	"20"	"0"	"0.002209"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEQESLEFGK"	"[M].aEQESLEFGk.[A]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"704.86102"	"1408.71477"	"1408.71574"	"-0.69"	"-0.00049"	"7/96"	"7"	"96"	"490851.474365234"	"HCD"	"MS2"	"4.496612"	"23.1"	"100.000"	"81.0101"	"27890"	"27890"	"27879"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.8"	""	"29.1"	""	"27.9"	""	"41.1"	"1.0"	"48.9"	"49.1"	""	"706"	"49"	"35.000"	"28.000"	"0.000467492561923717"	"22"	"0"	"0.0004102"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GRPFDYNGPR"	"[K].gRPFDYnGPR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"470.24313"	"1408.71485"	"1408.71708"	"-1.58"	"-0.00074"	"7/88"	"7"	"88"	"2986331.41912842"	"HCD"	"MS2"	"22.28966"	"96.1"	"100.000"	"38.3026"	"10578"	"10578"	"10552"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"124.5"	""	"92.4"	""	"118.3"	""	"196.0"	"0.4"	"194.8"	"186.1"	""	"706"	"30"	"35.000"	"28.000"	"0.038794906131968"	"23"	"0"	"0.003531"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEQESLEFGK"	"[M].aEQESLEFGk.[A]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"704.86108"	"1408.71489"	"1408.71574"	"-0.60"	"-0.00042"	"7/96"	"7"	"96"	"630391.459472656"	"HCD"	"MS2"	"6.11628"	"29.0"	"100.000"	"80.9831"	"27880"	"27880"	"27867"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.4"	""	"35.6"	""	"38.5"	""	"43.4"	"0.2"	"63.1"	"58.5"	""	"724"	"50"	"35.000"	"28.000"	"0.000337838056888511"	""	"0"	"0.0006455"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GRPFDYNGPR"	"[K].gRPFDYnGPR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.7083"	"0.0000"	"1"	"1"	"1"	"470.24326"	"1408.71521"	"1408.71708"	"-1.32"	"-0.00062"	"7/88"	"7"	"88"	"2261466.11065674"	"HCD"	"MS2"	"54.47798"	"79.6"	"100.000"	"41.1012"	"11708"	"11708"	"11692"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"114.3"	""	"89.8"	""	"108.6"	""	"136.1"	""	"150.1"	"161.5"	""	"736"	"24"	"35.000"	"28.000"	"0.145160287163702"	"21"	"0.0003538"	"0.006132"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GRPFDYNGPR"	"[K].gRPFDYnGPR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"470.24356"	"1408.71613"	"1408.71708"	"-0.67"	"-0.00032"	"7/88"	"7"	"88"	"2721763.9397583"	"HCD"	"MS2"	"18.65684"	"90.0"	"100.000"	"38.5039"	"10651"	"10651"	"10631"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"124.1"	""	"94.0"	""	"111.8"	""	"168.9"	""	"179.4"	"182.4"	""	"724"	"28"	"35.000"	"28.000"	"0.0592527580756867"	"21"	"0.0004639"	"0.008051"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTFTVAQNER"	"[K].nTFTVAQNER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"704.87170"	"1408.73613"	"1408.73821"	"-1.47"	"-0.00104"	"9/104"	"9"	"104"	"2338575.26397705"	"HCD"	"MS2"	"35.7838"	"161.8"	"100.000"	"38.7443"	"10758"	"10758"	"10736"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"260.5"	""	"225.4"	""	"220.2"	""	"249.2"	""	"295.1"	"284.0"	""	"855"	"18"	"36.000"	"29.000"	"0.626521702008652"	"22"	"0.0001301"	"0.003866"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTFTVAQNER"	"[K].nTFTVAQNER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.4516"	"0.0000"	"1"	"1"	"1"	"704.87256"	"1408.73784"	"1408.73821"	"-0.26"	"-0.00018"	"8/104"	"8"	"104"	"2277449.70263672"	"HCD"	"MS2"	"40.12975"	"159.9"	"100.000"	"38.9499"	"10833"	"10833"	"10805"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"251.0"	""	"234.7"	""	"215.4"	""	"248.8"	""	"299.0"	"266.4"	""	"855"	"31"	"36.000"	"29.000"	"0.0332610625569516"	""	"0"	"0.0002394"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEELQITAGR"	"[K].yEELQITAGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU2"	"Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1"	"Q4FZU2"	"Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"704.88446"	"1408.76164"	"1408.76336"	"-1.22"	"-0.00086"	"6/92"	"6"	"92"	"1016918.24816895"	"HCD"	"MS2"	"0"	"58.5"	"100.000"	"65.7000"	"21690"	"21690"	"21670"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"107.4"	""	"77.2"	""	"100.7"	""	"82.2"	""	"105.3"	"82.5"	""	"919"	"43"	"36.000"	"29.000"	"0.00231358529738042"	"28"	"0"	"0.0004362"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSYGLDLEAVR"	"[K].gSYGLDLEAVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVR3"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Rattus norvegicus OX=10116 GN=Inppl1 PE=1 SV=1"	"Q9WVR3"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Rattus norvegicus OX=10116 GN=Inppl1 PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"704.88470"	"1408.76213"	"1408.76336"	"-0.87"	"-0.00061"	"8/92"	"8"	"92"	"225595.48046875"	"HCD"	"MS2"	"11.23986"	"14.3"	"100.000"	"78.5982"	"26915"	"26915"	"26900"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.6"	""	"17.5"	""	"19.6"	""	"20.1"	""	"25.1"	"32.8"	""	"931"	"38"	"36.000"	"29.000"	"0.0074117316244232"	"29"	"0"	"0.003364"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEELQITAGR"	"[K].yEELQITAGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU2"	"Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1"	"Q4FZU2"	"Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"704.88477"	"1408.76225"	"1408.76336"	"-0.78"	"-0.00055"	"6/92"	"6"	"92"	"1227355.7477417"	"HCD"	"MS2"	"2.055552"	"65.9"	"100.000"	"66.0108"	"21817"	"21817"	"21796"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"118.0"	""	"106.9"	""	"119.2"	""	"77.9"	"1.9"	"111.6"	"86.7"	""	"931"	"43"	"36.000"	"29.000"	"0.00227467673274089"	"23"	"0"	"0.0005175"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GSYGLDLEAVR"	"[K].gSYGLDLEAVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVR3"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Rattus norvegicus OX=10116 GN=Inppl1 PE=1 SV=1"	"Q9WVR3"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Rattus norvegicus OX=10116 GN=Inppl1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"704.88483"	"1408.76238"	"1408.76336"	"-0.70"	"-0.00049"	"5/92"	"5"	"92"	"192127.598449707"	"HCD"	"MS2"	"31.99338"	"12.5"	"100.000"	"78.5380"	"26896"	"26896"	"26879"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.1"	""	"16.4"	""	"17.9"	""	"19.9"	""	"21.0"	"26.4"	""	"931"	"17"	"36.000"	"29.000"	"0.852942363613799"	"19"	"0.004942"	"0.05434"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEELQITAGR"	"[K].yEELQITAGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU2"	"Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1"	"Q4FZU2"	"Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"704.88513"	"1408.76299"	"1408.76336"	"-0.26"	"-0.00019"	"8/92"	"8"	"92"	"1191993.3770752"	"HCD"	"MS2"	"0"	"63.2"	"100.000"	"66.0929"	"21835"	"21835"	"21816"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"122.7"	""	"89.4"	""	"127.3"	""	"72.9"	"2.6"	"105.6"	"76.1"	""	"940"	"41"	"36.000"	"29.000"	"0.00364836144815485"	"18"	"0"	"0.0001024"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEELQITAGR"	"[K].yEELQITAGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU2"	"Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1"	"Q4FZU2"	"Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"704.88544"	"1408.76360"	"1408.76336"	"0.17"	"0.00012"	"9/92"	"9"	"92"	"984513.510314941"	"HCD"	"MS2"	"0"	"58.9"	"100.000"	"65.7933"	"21713"	"21713"	"21692"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"110.0"	""	"81.7"	""	"107.6"	""	"85.9"	""	"91.0"	"82.5"	""	"936"	"41"	"36.000"	"29.000"	"0.00338256268085816"	"19"	"0"	"0.0003719"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GETSVTNDK"	"[K].gETSVTNDk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5HZY0"	"UBX domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Ubxn4 PE=1 SV=1"	"Q5HZY0"	"UBX domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Ubxn4 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"704.88763"	"1408.76799"	"1408.76839"	"-0.29"	"-0.00020"	"13/80"	"13"	"80"	"418813.512878418"	"HCD"	"MS2"	"0"	"36.2"	"100.000"	"30.6043"	"7463"	"7463"	"7442"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.6"	""	"18.9"	""	"35.0"	""	"84.0"	"1.4"	"77.7"	"86.0"	""	"887"	"42"	"36.000"	"29.000"	"0.00256976626865322"	""	"0"	"0.0004255"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEFTLNR"	"[K].gAGTDEFTLNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"705.36371"	"1409.72014"	"1409.72222"	"-1.48"	"-0.00104"	"10/90"	"10"	"90"	"1429422.55718994"	"HCD"	"MS2"	"15.94566"	"88.1"	"100.000"	"53.8809"	"16910"	"16910"	"16880"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"131.4"	""	"112.1"	""	"100.3"	""	"143.5"	""	"179.0"	"176.0"	""	"768"	"44"	"35.000"	"28.000"	"0.0013656242633049"	"23"	"0"	"8.227E-06"	"0.921"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSGLQGEFDAR"	"[R].tSGLQGEFDAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6UPR8"	"Endoplasmic reticulum metallopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Ermp1 PE=1 SV=1"	"Q6UPR8"	"Endoplasmic reticulum metallopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Ermp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"705.36401"	"1409.72075"	"1409.72222"	"-1.04"	"-0.00074"	"8/108"	"8"	"108"	"409425.784851074"	"HCD"	"MS2"	"15.33701"	"34.7"	"100.000"	"52.5753"	"16388"	"16388"	"16360"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.4"	""	"49.1"	""	"35.8"	""	"63.1"	"0.6"	"70.2"	"67.3"	""	"769"	"33"	"35.000"	"28.000"	"0.020887975245884"	"26"	"0"	"0.001461"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEFTLNR"	"[K].gAGTDEFTLNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"705.36414"	"1409.72099"	"1409.72222"	"-0.87"	"-0.00061"	"7/90"	"7"	"90"	"1685560.11975098"	"HCD"	"MS2"	"10.06017"	"102.1"	"100.000"	"53.6320"	"16819"	"16819"	"16796"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"150.4"	""	"132.6"	""	"134.6"	""	"161.2"	""	"186.8"	"203.2"	""	"768"	"54"	"35.000"	"28.000"	"0.000166468177300811"	"22"	"0"	"4.577E-06"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEFTLNR"	"[K].gAGTDEFTLNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"705.36444"	"1409.72161"	"1409.72222"	"-0.44"	"-0.00031"	"10/90"	"10"	"90"	"2142940.30566406"	"HCD"	"MS2"	"1.004934"	"122.7"	"100.000"	"54.2395"	"17067"	"17067"	"17049"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"165.8"	""	"153.3"	""	"169.3"	""	"200.9"	"0.2"	"227.9"	"245.9"	""	"775"	"50"	"35.000"	"28.000"	"0.000420989929151613"	"25"	"0"	"1.544E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEFTLNR"	"[K].gAGTDEFTLNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"705.36444"	"1409.72161"	"1409.72222"	"-0.44"	"-0.00031"	"10/90"	"10"	"90"	"2923060.64300537"	"HCD"	"MS2"	"0"	"165.2"	"100.000"	"54.4504"	"17138"	"17138"	"17120"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"225.9"	""	"214.5"	""	"229.9"	""	"249.2"	""	"323.7"	"326.0"	""	"775"	"45"	"35.000"	"28.000"	"0.00113050296792545"	"26"	"0"	"1.043E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEFTLNR"	"[K].gAGTDEFTLNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"705.36450"	"1409.72173"	"1409.72222"	"-0.35"	"-0.00025"	"10/90"	"10"	"90"	"29411415.9970703"	"HCD"	"MS2"	"0"	"437.0"	"31.474"	"53.9267"	"16940"	"16940"	"16923"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"609.2"	""	"589.2"	""	"578.3"	""	"682.8"	""	"827.4"	"856.7"	""	"777"	"48"	"35.000"	"28.000"	"0.000661288580511439"	"25"	"0"	"1.424E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSGLQGEFDAR"	"[R].tSGLQGEFDAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6UPR8"	"Endoplasmic reticulum metallopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Ermp1 PE=1 SV=1"	"Q6UPR8"	"Endoplasmic reticulum metallopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Ermp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"705.36475"	"1409.72222"	"1409.72222"	"-0.01"	"0.00000"	"9/108"	"9"	"108"	"550111.120239258"	"HCD"	"MS2"	"9.825604"	"37.3"	"100.000"	"52.6798"	"16419"	"16419"	"16393"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.9"	""	"39.0"	""	"36.6"	""	"73.3"	"0.1"	"77.3"	"83.2"	""	"775"	"52"	"35.000"	"28.000"	"0.000262586084199137"	"20"	"0"	"4.864E-05"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEFTLNR"	"[K].gAGTDEFTLNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"705.36493"	"1409.72258"	"1409.72222"	"0.25"	"0.00018"	"10/90"	"10"	"90"	"27231774.2380371"	"HCD"	"MS2"	"0"	"466.9"	"35.677"	"54.1619"	"17025"	"17025"	"17008"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"688.6"	""	"600.9"	""	"604.9"	""	"761.0"	""	"881.8"	"888.9"	""	"789"	"51"	"35.000"	"28.000"	"0.000280573731136238"	"23"	"0"	"3.795E-05"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLDSYIDGR"	"[K].eLLDSYIDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.8033"	"0.0000"	"1"	"1"	"1"	"705.37659"	"1409.74590"	"1409.74738"	"-1.05"	"-0.00074"	"7/86"	"7"	"86"	"270787.057922363"	"HCD"	"MS2"	"0"	"15.0"	"100.000"	"90.6727"	"31676"	"31676"	"31666"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.7"	""	"21.2"	""	"16.8"	""	"20.5"	""	"30.8"	"31.9"	""	"859"	"61"	"36.000"	"29.000"	"3.69796816563286E-05"	"28"	"0"	"0.0005963"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLDSYIDGR"	"[K].eLLDSYIDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.8070"	"0.0000"	"1"	"1"	"1"	"705.37659"	"1409.74590"	"1409.74738"	"-1.05"	"-0.00074"	"7/86"	"7"	"86"	"216834.4375"	"HCD"	"MS2"	"0"	"12.1"	"100.000"	"90.1103"	"31459"	"31459"	"31447"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.2"	""	"16.4"	""	"13.5"	""	"21.0"	""	"25.2"	"17.1"	""	"859"	"57"	"36.000"	"29.000"	"9.43980815361083E-05"	"27"	"0"	"0.001163"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAEDLYEAR"	"[R].lTAEDLYEAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"705.37695"	"1409.74663"	"1409.74738"	"-0.53"	"-0.00037"	"8/84"	"8"	"84"	"1550094.23236084"	"HCD"	"MS2"	"0"	"75.9"	"100.000"	"74.4706"	"25249"	"25249"	"25233"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"131.9"	""	"116.4"	""	"126.0"	""	"87.0"	"2.7"	"117.8"	"135.9"	""	"867"	"56"	"36.000"	"29.000"	"0.000111170382983043"	"18"	"0"	"1.916E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAEDLYEAR"	"[R].lTAEDLYEAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9464"	"0.0000"	"1"	"1"	"1"	"705.37695"	"1409.74663"	"1409.74738"	"-0.53"	"-0.00037"	"8/84"	"8"	"84"	"1323314.3493042"	"HCD"	"MS2"	"0"	"63.0"	"100.000"	"74.3609"	"25218"	"25218"	"25201"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"100.9"	""	"93.6"	""	"103.5"	""	"72.2"	"1.4"	"108.4"	"116.7"	""	"867"	"56"	"36.000"	"29.000"	"0.000112716917063214"	"19"	"0"	"2.22E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLDSYIDGR"	"[K].eLLDSYIDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.8167"	"0.0000"	"1"	"1"	"1"	"705.37701"	"1409.74675"	"1409.74738"	"-0.44"	"-0.00031"	"7/86"	"7"	"86"	"243906.618774414"	"HCD"	"MS2"	"0"	"13.4"	"100.000"	"90.7176"	"31698"	"31698"	"31683"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.3"	""	"20.5"	""	"13.2"	""	"16.0"	""	"23.9"	"27.9"	""	"868"	"60"	"36.000"	"29.000"	"4.15422226941963E-05"	"27"	"0"	"0.0008908"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAEDLYEAR"	"[R].lTAEDLYEAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9821"	"0.0000"	"1"	"1"	"1"	"705.37714"	"1409.74700"	"1409.74738"	"-0.27"	"-0.00019"	"8/84"	"8"	"84"	"697508.576477051"	"HCD"	"MS2"	"12.78385"	"37.6"	"100.000"	"74.0609"	"25095"	"25095"	"25076"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.6"	""	"62.6"	""	"58.6"	""	"45.0"	""	"59.5"	"66.1"	""	"868"	"56"	"36.000"	"29.000"	"0.000118437635773869"	"17"	"0"	"2.461E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLDSYIDGR"	"[K].eLLDSYIDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.8033"	"0.0000"	"1"	"1"	"1"	"705.37714"	"1409.74700"	"1409.74738"	"-0.27"	"-0.00019"	"7/86"	"7"	"86"	"1806658.9631958"	"HCD"	"MS2"	"0"	"83.6"	"100.000"	"90.3779"	"31561"	"31561"	"31554"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"147.2"	""	"92.0"	""	"92.5"	""	"122.5"	""	"165.7"	"173.3"	""	"868"	"61"	"36.000"	"29.000"	"3.4712806667305E-05"	"28"	"0"	"1.327E-05"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLDSYIDGR"	"[K].eLLDSYIDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.8033"	"0.0000"	"1"	"1"	"1"	"705.37714"	"1409.74700"	"1409.74738"	"-0.27"	"-0.00019"	"7/86"	"7"	"86"	"1885311.74383545"	"HCD"	"MS2"	"0"	"82.9"	"100.000"	"90.4251"	"31583"	"31583"	"31572"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"149.0"	""	"98.6"	""	"88.3"	""	"129.0"	""	"148.5"	"172.6"	""	"868"	"61"	"36.000"	"29.000"	"3.39226467191335E-05"	"28"	"0"	"2.927E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLDSYIDGR"	"[K].eLLDSYIDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"705.37738"	"1409.74748"	"1409.74738"	"0.08"	"0.00005"	"8/86"	"8"	"86"	"279781.133666992"	"HCD"	"MS2"	"0"	"14.5"	"100.000"	"90.1510"	"31477"	"31477"	"31459"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.7"	""	"22.7"	""	"15.2"	""	"25.4"	""	"25.2"	"24.9"	""	"859"	"53"	"36.000"	"29.000"	"0.000192292864143748"	"26"	"0"	"7.941E-05"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSASTDIEK"	"[R].tSASTDIEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"705.39783"	"1409.78838"	"1409.78880"	"-0.30"	"-0.00021"	"7/78"	"7"	"78"	"1198300.03948975"	"HCD"	"MS2"	"52.36401"	"102.0"	"100.000"	"39.4090"	"11029"	"11029"	"11007"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"127.9"	""	"138.4"	""	"159.1"	""	"156.8"	"0.1"	"199.4"	"185.2"	""	"832"	"36"	"36.000"	"29.000"	"0.00972956291282291"	""	"0"	"0.0008245"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQEEYIK"	"[K].aAQEEYIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"470.60568"	"1409.80249"	"1409.80405"	"-1.10"	"-0.00052"	"6/68"	"6"	"68"	"4076546.29632568"	"HCD"	"MS2"	"24.50286"	"140.7"	"100.000"	"47.2726"	"14214"	"14214"	"14193"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"198.3"	""	"165.4"	""	"176.1"	""	"225.9"	""	"242.4"	"328.4"	""	"775"	"36"	"35.000"	"28.000"	"0.0101688468556147"	"28"	"0.000936"	"0.01298"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQEEYIK"	"[K].aAQEEYIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"705.40497"	"1409.80266"	"1409.80405"	"-0.99"	"-0.00070"	"7/68"	"7"	"68"	"2408806.39831543"	"HCD"	"MS2"	"6.674279"	"198.5"	"100.000"	"47.1622"	"14169"	"14169"	"14145"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"299.4"	""	"256.4"	""	"224.8"	""	"300.5"	""	"338.0"	"470.3"	""	"776"	"44"	"35.000"	"28.000"	"0.00149221611433597"	"27"	"0"	"0.003126"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQEEYIK"	"[K].aAQEEYIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"470.60580"	"1409.80286"	"1409.80405"	"-0.85"	"-0.00040"	"6/68"	"6"	"68"	"5626935.35974121"	"HCD"	"MS2"	"16.06077"	"181.3"	"100.000"	"47.0455"	"14133"	"14133"	"14110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"246.1"	""	"215.6"	""	"223.0"	""	"295.1"	""	"312.8"	"430.0"	""	"773"	"33"	"35.000"	"28.000"	"0.0204244089811107"	"27"	"0.001886"	"0.02098"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQEEYIK"	"[K].aAQEEYIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"705.40509"	"1409.80290"	"1409.80405"	"-0.81"	"-0.00057"	"7/68"	"7"	"68"	"11645966.0187988"	"HCD"	"MS2"	"0"	"916.7"	"100.000"	"47.2294"	"14208"	"14208"	"14190"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1268.2"	""	"1056.3"	""	"1158.0"	""	"1292.8"	"12.2"	"1571.4"	"2340.3"	""	"766"	"46"	"35.000"	"28.000"	"0.000901983875732171"	"28"	"0.0001301"	"0.004993"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQEEYIK"	"[K].aAQEEYIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"705.40533"	"1409.80339"	"1409.80405"	"-0.47"	"-0.00033"	"7/68"	"7"	"68"	"4578674.00482178"	"HCD"	"MS2"	"0"	"363.0"	"100.000"	"46.9327"	"14087"	"14087"	"14062"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"537.4"	""	"435.9"	""	"426.2"	""	"539.3"	"1.2"	"607.8"	"894.9"	""	"783"	"46"	"35.000"	"28.000"	"0.000913548831383012"	"28"	"0"	"0.003294"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQEEYIK"	"[K].aAQEEYIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"705.40594"	"1409.80461"	"1409.80405"	"0.40"	"0.00028"	"7/68"	"7"	"68"	"16718756.5324097"	"HCD"	"MS2"	"0"	"823.8"	"64.158"	"47.4567"	"14290"	"14290"	"14273"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1170.5"	""	"925.7"	""	"999.8"	""	"1169.0"	"0.7"	"1423.4"	"2128.8"	""	"785"	"46"	"35.000"	"28.000"	"0.000909577400112628"	"28"	"0.0001301"	"0.004055"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLAPEQPVTLR"	"[R].gLAPEQPVTLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"705.41858"	"1409.82988"	"1409.83138"	"-1.06"	"-0.00075"	"9/98"	"9"	"98"	"1537527.75634766"	"HCD"	"MS2"	"0"	"76.3"	"100.000"	"61.9763"	"20169"	"20169"	"20154"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"117.9"	""	"116.1"	""	"101.0"	""	"115.2"	"0.6"	"127.4"	"143.6"	""	"654"	"51"	"35.000"	"28.000"	"0.000252666551326295"	"18"	"0"	"2.213E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLAPEQPVTLR"	"[R].gLAPEQPVTLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"705.41901"	"1409.83074"	"1409.83138"	"-0.46"	"-0.00032"	"10/98"	"10"	"98"	"676354.808044434"	"HCD"	"MS2"	"100"	"39.2"	"100.000"	"61.7929"	"20111"	"20111"	"20092"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.4"	""	"54.7"	"2.1"	"56.9"	""	"64.4"	""	"72.7"	"65.8"	""	"638"	"29"	"35.000"	"28.000"	"0.0434300853706638"	"15"	"0"	"0.0001771"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDYEVVK"	"[K].aEDYEVVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"705.89691"	"1410.78655"	"1410.78807"	"-1.08"	"-0.00076"	"11/62"	"11"	"62"	"468067.696960449"	"HCD"	"MS2"	"35.0563"	"49.6"	"100.000"	"56.7642"	"18094"	"18094"	"18070"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.4"	""	"62.3"	""	"59.8"	""	"70.5"	"2.0"	"114.2"	"103.2"	""	"755"	"32"	"35.000"	"28.000"	"0.0232764613202709"	"28"	"0.0002479"	"0.005589"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDYEVVK"	"[K].aEDYEVVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"705.89752"	"1410.78777"	"1410.78807"	"-0.21"	"-0.00015"	"7/62"	"7"	"62"	"560235.492248535"	"HCD"	"MS2"	"22.28086"	"61.8"	"100.000"	"56.9896"	"18172"	"18172"	"18147"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.7"	""	"74.8"	""	"81.4"	""	"81.2"	""	"143.5"	"127.4"	""	"760"	"36"	"35.000"	"28.000"	"0.00911556509227406"	"28"	"0"	"0.002493"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPPTLAQPSR"	"[K].sEPPTLAQPSR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"706.38971"	"1411.77214"	"1411.77426"	"-1.50"	"-0.00106"	"7/104"	"7"	"104"	"1275072.09759521"	"HCD"	"MS2"	"18.7931"	"76.4"	"100.000"	"39.4097"	"11020"	"11020"	"10998"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"96.6"	""	"93.9"	""	"103.2"	""	"136.1"	""	"145.3"	"149.7"	""	"710"	"28"	"35.000"	"28.000"	"0.0567843100158207"	"20"	"0.001886"	"0.0209"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPPTLAQPSR"	"[K].sEPPTLAQPSR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"706.39001"	"1411.77275"	"1411.77426"	"-1.07"	"-0.00075"	"7/104"	"7"	"104"	"1445185.79632568"	"HCD"	"MS2"	"0"	"89.6"	"100.000"	"39.2227"	"10953"	"10953"	"10931"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"110.8"	""	"125.3"	""	"117.9"	""	"152.3"	""	"175.4"	"168.6"	""	"721"	"37"	"35.000"	"28.000"	"0.00754927540334247"	"24"	"0.000936"	"0.01231"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPPTLAQPSR"	"[K].sEPPTLAQPSR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"706.39032"	"1411.77336"	"1411.77426"	"-0.63"	"-0.00045"	"13/104"	"13"	"104"	"815970.381225586"	"HCD"	"MS2"	"0"	"43.9"	"100.000"	"39.5305"	"11079"	"11079"	"11052"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"64.7"	""	"52.1"	""	"56.7"	""	"73.3"	"0.8"	"89.2"	"79.8"	""	"727"	"35"	"35.000"	"28.000"	"0.0108768819540708"	"21"	"0.0002479"	"0.005132"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPPTLAQPSR"	"[K].sEPPTLAQPSR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"706.39075"	"1411.77422"	"1411.77426"	"-0.03"	"-0.00002"	"7/104"	"7"	"104"	"779400.532775879"	"HCD"	"MS2"	"0"	"40.4"	"100.000"	"39.7957"	"11178"	"11178"	"11149"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.0"	""	"54.1"	""	"45.3"	""	"76.4"	"1.3"	"72.7"	"74.7"	""	"714"	"40"	"35.000"	"28.000"	"0.00353727004326718"	"24"	"0"	"0.000147"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPPTLAQPSR"	"[K].sEPPTLAQPSR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"0"	"2"	"2"	"0.2692"	"0.0000"	"1"	"1"	"1"	"706.39081"	"1411.77434"	"1411.77426"	"0.06"	"0.00004"	"6/104"	"6"	"104"	"442539.240905762"	"HCD"	"MS2"	"0"	"26.9"	"100.000"	"40.1682"	"11330"	"11330"	"11305"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.5"	""	"41.0"	""	"37.7"	""	"43.1"	"0.8"	"47.6"	"44.6"	""	"714"	"26"	"35.000"	"28.000"	"0.0840752594350875"	""	"0.003449"	"0.03496"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEGELHDLR"	"[R].tLEGELHDLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"3"	"706.39117"	"1411.77507"	"1411.77426"	"0.58"	"0.00041"	"7/86"	"7"	"86"	"378366.360778809"	"HCD"	"MS2"	"16.53288"	"20.7"	"100.000"	"59.3915"	"19151"	"19151"	"19126"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.7"	""	"29.9"	""	"18.9"	""	"32.6"	""	"46.1"	"49.7"	""	"707"	"13"	"35.000"	"28.000"	"1.7076128652106"	"23"	"0.001546"	"0.01948"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPPTLAQPSR"	"[K].sEPPTLAQPSR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"706.39130"	"1411.77532"	"1411.77426"	"0.75"	"0.00053"	"7/104"	"7"	"104"	"439099.663574219"	"HCD"	"MS2"	"0"	"28.3"	"100.000"	"39.9467"	"11249"	"11249"	"11220"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.8"	""	"38.7"	""	"43.4"	""	"40.9"	"0.5"	"52.8"	"52.2"	""	"706"	"28"	"35.000"	"28.000"	"0.0613443692548529"	"25"	"0.002973"	"0.02866"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTSSTTNTGK"	"[R].gTSSTTNTGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.9298"	"0.0000"	"1"	"1"	"1"	"706.39325"	"1411.77922"	"1411.77929"	"-0.05"	"-0.00004"	"9/90"	"9"	"90"	"2398899.80554199"	"HCD"	"MS2"	"34.48291"	"194.9"	"100.000"	"22.0525"	"4002"	"4002"	"3971"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"324.1"	""	"286.4"	""	"236.2"	""	"307.7"	"1.4"	"353.1"	"336.7"	""	"679"	"57"	"35.000"	"28.000"	"6.40973063018191E-05"	"20"	"0"	"4.356E-05"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTSSTTNTGK"	"[R].gTSSTTNTGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"706.39325"	"1411.77922"	"1411.77929"	"-0.05"	"-0.00004"	"9/90"	"9"	"90"	"2335286.08221436"	"HCD"	"MS2"	"5.674171"	"201.5"	"100.000"	"22.1147"	"4010"	"4010"	"3982"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"329.8"	""	"295.8"	""	"241.0"	""	"323.2"	""	"367.8"	"352.7"	""	"679"	"56"	"35.000"	"28.000"	"8.84789130224624E-05"	"20"	"0"	"2.973E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDYGVTK"	"[K].aAEDYGVTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.7656"	"0.0000"	"1"	"1"	"1"	"706.39459"	"1411.78191"	"1411.78332"	"-1.00"	"-0.00070"	"16/74"	"16"	"74"	"22975160.9455566"	"HCD"	"MS2"	"0"	"755.3"	"43.999"	"47.3033"	"14239"	"14239"	"14222"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1149.9"	""	"957.2"	""	"1053.0"	""	"1124.1"	"6.8"	"1504.6"	"1363.5"	""	"673"	"64"	"35.000"	"28.000"	"1.22175765430139E-05"	""	"0"	"0.0001856"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDYGVTK"	"[K].aAEDYGVTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"706.39465"	"1411.78203"	"1411.78332"	"-0.91"	"-0.00064"	"13/74"	"13"	"74"	"395689.040405273"	"HCD"	"MS2"	"0"	"40.1"	"100.000"	"47.9421"	"14499"	"14499"	"14474"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.1"	""	"47.1"	"2.5"	"55.0"	""	"56.7"	""	"80.9"	"82.7"	""	"673"	"46"	"35.000"	"28.000"	"0.000903618405964088"	"24"	"0"	"0.001281"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDYGVTK"	"[K].aAEDYGVTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.6857"	"0.0000"	"1"	"1"	"1"	"471.26563"	"1411.78232"	"1411.78332"	"-0.70"	"-0.00033"	"9/74"	"9"	"74"	"2436396.92889404"	"HCD"	"MS2"	"9.892035"	"96.5"	"100.000"	"47.8846"	"14464"	"14464"	"14442"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"114.7"	""	"115.2"	""	"142.1"	""	"160.1"	"0.5"	"194.9"	"187.9"	""	"653"	"35"	"35.000"	"28.000"	"0.0111656287980726"	"25"	"0.0003538"	"0.007386"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDYGVTK"	"[K].aAEDYGVTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"706.39484"	"1411.78240"	"1411.78332"	"-0.65"	"-0.00046"	"16/74"	"16"	"74"	"17605062.3376465"	"HCD"	"MS2"	"0"	"835.9"	"61.932"	"47.5742"	"14338"	"14338"	"14321"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1250.1"	""	"1073.1"	""	"1139.6"	""	"1264.3"	"2.4"	"1679.4"	"1515.0"	""	"682"	"62"	"35.000"	"28.000"	"2.3107575409524E-05"	""	"0"	"0.0001859"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDYGVTK"	"[K].aAEDYGVTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.5532"	"0.0000"	"1"	"1"	"1"	"471.26566"	"1411.78241"	"1411.78332"	"-0.64"	"-0.00030"	"7/74"	"7"	"74"	"8360286.06048584"	"HCD"	"MS2"	"28.2558"	"308.4"	"100.000"	"47.2735"	"14226"	"14226"	"14206"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"437.8"	""	"417.9"	""	"420.7"	""	"477.6"	""	"624.5"	"546.9"	""	"696"	"47"	"35.000"	"28.000"	"0.000730431079500986"	""	"0.0001301"	"0.00384"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDYGVTK"	"[K].aAEDYGVTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.7656"	"0.0000"	"1"	"1"	"1"	"706.39502"	"1411.78276"	"1411.78332"	"-0.39"	"-0.00028"	"16/74"	"16"	"74"	"2871105.33612061"	"HCD"	"MS2"	"7.333284"	"249.1"	"100.000"	"47.6139"	"14366"	"14366"	"14349"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"340.0"	""	"331.6"	""	"344.6"	""	"373.0"	""	"508.8"	"469.4"	""	"696"	"64"	"35.000"	"28.000"	"1.32610906541033E-05"	""	"0"	"8.982E-05"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDYGVTK"	"[K].aAEDYGVTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.5306"	"0.0000"	"1"	"1"	"1"	"471.26587"	"1411.78305"	"1411.78332"	"-0.19"	"-0.00009"	"7/74"	"7"	"74"	"6049631.25701904"	"HCD"	"MS2"	"34.26214"	"218.9"	"100.000"	"47.5465"	"14326"	"14326"	"14305"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"314.9"	""	"295.3"	""	"304.1"	""	"328.2"	""	"438.1"	"395.1"	""	"693"	"49"	"35.000"	"28.000"	"0.000466340612680386"	""	"0"	"0.002293"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDYGVTK"	"[K].aAEDYGVTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.7656"	"0.0000"	"1"	"1"	"1"	"706.39532"	"1411.78337"	"1411.78332"	"0.04"	"0.00003"	"16/74"	"16"	"74"	"5049914.61883545"	"HCD"	"MS2"	"0"	"408.7"	"100.000"	"47.8710"	"14459"	"14459"	"14442"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"569.0"	""	"520.8"	""	"575.0"	""	"586.8"	"1.0"	"872.6"	"752.0"	""	"689"	"64"	"35.000"	"28.000"	"1.27112782707417E-05"	""	"0"	"0.0002643"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEETLAPQPDL"	"[R].aEETLAPQPDL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62865"	"cGMP-inhibited 3',5'-cyclic phosphodiesterase A OS=Rattus norvegicus OX=10116 GN=Pde3a PE=1 SV=1"	"Q62865"	"cGMP-inhibited 3',5'-cyclic phosphodiesterase A OS=Rattus norvegicus OX=10116 GN=Pde3a PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"706.87610"	"1412.74492"	"1412.74704"	"-1.50"	"-0.00106"	"5/96"	"5"	"96"	"163850.796386719"	"HCD"	"MS2"	"30.74296"	"5.4"	"100.000"	"83.5383"	"28891"	"28891"	"28877"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.6"	""	"6.6"	""	"7.4"	""	"9.6"	""	"9.5"	"10.5"	""	"728"	"7"	"35.000"	"28.000"	"6.65428478675958"	"16"	"0.00447"	"0.04836"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEETLAPQPDL"	"[R].aEETLAPQPDL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62865"	"cGMP-inhibited 3',5'-cyclic phosphodiesterase A OS=Rattus norvegicus OX=10116 GN=Pde3a PE=1 SV=1"	"Q62865"	"cGMP-inhibited 3',5'-cyclic phosphodiesterase A OS=Rattus norvegicus OX=10116 GN=Pde3a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.87640"	"1412.74553"	"1412.74704"	"-1.07"	"-0.00076"	"4/96"	"4"	"96"	"158402.82598877"	"HCD"	"MS2"	"26.47646"	"4.4"	"100.000"	"83.5201"	"28887"	"28887"	"28869"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.9"	""	"6.8"	""	"3.8"	""	"9.3"	""	"8.0"	"8.6"	""	"737"	"7"	"35.000"	"28.000"	"7.1851773501084"	"13"	"0.007627"	"0.09081"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEETLAPQPDL"	"[R].aEETLAPQPDL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62865"	"cGMP-inhibited 3',5'-cyclic phosphodiesterase A OS=Rattus norvegicus OX=10116 GN=Pde3a PE=1 SV=1"	"Q62865"	"cGMP-inhibited 3',5'-cyclic phosphodiesterase A OS=Rattus norvegicus OX=10116 GN=Pde3a PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"706.87708"	"1412.74687"	"1412.74704"	"-0.12"	"-0.00008"	"5/96"	"5"	"96"	"121205.971496582"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"83.4230"	"28849"	"28849"	"28836"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.4"	""	"1.9"	""	"5.9"	""	"5.0"	""	"5.6"	"8.2"	""	"745"	"29"	"35.000"	"28.000"	"0.0487670266317279"	"22"	"0"	"0.00309"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEMPVDK"	"[K].yGEmPVDk.[A]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"471.58740"	"1412.74765"	"1412.74957"	"-1.36"	"-0.00064"	"8/64"	"8"	"64"	"1671073.80957031"	"HCD"	"MS2"	"20.97202"	"75.3"	"100.000"	"42.8592"	"12424"	"12424"	"12402"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.4"	""	"79.8"	""	"90.4"	""	"167.4"	"0.4"	"149.7"	"136.7"	""	"739"	"24"	"35.000"	"28.000"	"0.159446298887859"	"18"	"0.001211"	"0.01503"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEMPVDK"	"[K].yGEmPVDk.[A]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"706.87787"	"1412.74846"	"1412.74957"	"-0.79"	"-0.00056"	"7/64"	"7"	"64"	"1390809.38275146"	"HCD"	"MS2"	"27.3913"	"89.0"	"100.000"	"42.4633"	"12273"	"12273"	"12252"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"108.6"	""	"107.3"	""	"109.4"	""	"221.9"	"0.2"	"148.4"	"146.6"	""	"724"	"23"	"35.000"	"28.000"	"0.170101667315088"	"24"	"0.008641"	"0.1076"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEMPVDK"	"[K].yGEmPVDk.[A]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"706.87805"	"1412.74883"	"1412.74957"	"-0.53"	"-0.00037"	"6/64"	"6"	"64"	"995512.16192627"	"HCD"	"MS2"	"26.63352"	"68.4"	"100.000"	"42.5489"	"12297"	"12297"	"12277"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"96.1"	""	"74.4"	""	"80.6"	""	"163.4"	"1.9"	"123.1"	"108.6"	""	"751"	"19"	"35.000"	"28.000"	"0.437129324043639"	"22"	"0.008668"	"0.1081"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYEETIGK"	"[K].dYEETIGk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"706.88684"	"1412.76641"	"1412.76733"	"-0.66"	"-0.00046"	"7/64"	"7"	"64"	"1596755.42987061"	"HCD"	"MS2"	"2.23902"	"143.7"	"100.000"	"56.2182"	"17871"	"17871"	"17853"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"257.2"	""	"164.3"	""	"179.1"	""	"226.3"	"3.4"	"256.5"	"273.7"	""	"714"	"46"	"35.000"	"28.000"	"0.000858357519602476"	"22"	"0"	"0.001647"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYEETIGK"	"[K].dYEETIGk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"706.88696"	"1412.76665"	"1412.76733"	"-0.48"	"-0.00034"	"6/64"	"6"	"64"	"298295.467346191"	"HCD"	"MS2"	"35.52068"	"29.7"	"100.000"	"56.6811"	"18046"	"18046"	"18020"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.4"	""	"38.8"	""	"40.9"	""	"45.6"	""	"57.8"	"49.2"	""	"715"	"22"	"35.000"	"28.000"	"0.203364922776673"	"21"	"0.001886"	"0.021"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYEETIGK"	"[K].dYEETIGk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"706.88696"	"1412.76665"	"1412.76733"	"-0.48"	"-0.00034"	"12/64"	"12"	"64"	"1463376.65600586"	"HCD"	"MS2"	"4.360959"	"125.6"	"100.000"	"56.3680"	"17918"	"17918"	"17899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"233.9"	""	"134.3"	""	"155.9"	""	"211.1"	""	"223.9"	"231.9"	""	"715"	"39"	"35.000"	"28.000"	"0.00496908065658773"	"24"	"0"	"0.002992"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTYEEAK"	"[R].dVTYEEAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"706.88702"	"1412.76677"	"1412.76733"	"-0.40"	"-0.00028"	"7/66"	"7"	"66"	"1500201.96685791"	"HCD"	"MS2"	"0"	"134.0"	"100.000"	"45.7768"	"13605"	"13605"	"13581"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"208.3"	""	"145.4"	""	"152.4"	""	"238.5"	"0.5"	"272.1"	"253.7"	""	"715"	"47"	"35.000"	"28.000"	"0.000791181358684015"	"23"	"0"	"0.001404"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTYEEAK"	"[R].dVTYEEAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"706.88708"	"1412.76689"	"1412.76733"	"-0.31"	"-0.00022"	"7/66"	"7"	"66"	"2515229.67205811"	"HCD"	"MS2"	"0"	"218.1"	"100.000"	"45.9585"	"13691"	"13691"	"13673"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"320.9"	""	"230.0"	""	"259.6"	""	"356.4"	"0.7"	"457.1"	"446.0"	""	"715"	"44"	"35.000"	"28.000"	"0.00138763755841657"	"22"	"0.0001301"	"0.004451"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTYEEAK"	"[R].dVTYEEAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"706.88715"	"1412.76702"	"1412.76733"	"-0.22"	"-0.00016"	"7/66"	"7"	"66"	"3577331.95019531"	"HCD"	"MS2"	"0"	"287.4"	"100.000"	"46.0714"	"13726"	"13726"	"13709"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"466.1"	""	"273.3"	""	"330.9"	""	"483.5"	""	"585.2"	"591.4"	""	"715"	"46"	"35.000"	"28.000"	"0.000815222290740149"	"22"	"0"	"0.002567"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTYEEAK"	"[R].dVTYEEAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"706.88733"	"1412.76738"	"1412.76733"	"0.04"	"0.00002"	"7/66"	"7"	"66"	"2323686.02435303"	"HCD"	"MS2"	"0"	"189.7"	"100.000"	"45.6386"	"13561"	"13561"	"13534"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"310.8"	""	"200.1"	""	"209.3"	""	"346.2"	""	"372.0"	"364.4"	""	"714"	"45"	"35.000"	"28.000"	"0.0011875946052596"	"21"	"0"	"0.002152"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VISPGPNSQER"	"[R].vISPGPNSQER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM62"	"Palmdelphin OS=Rattus norvegicus OX=10116 GN=Palmd PE=1 SV=1"	"Q4KM62"	"Palmdelphin OS=Rattus norvegicus OX=10116 GN=Palmd PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"706.88782"	"1412.76836"	"1412.76951"	"-0.81"	"-0.00057"	"6/102"	"6"	"102"	"521517.971374512"	"HCD"	"MS2"	"0"	"27.3"	"100.000"	"34.2450"	"8934"	"8934"	"8903"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.5"	""	"29.1"	""	"39.5"	""	"51.3"	""	"56.8"	"46.6"	""	"712"	"34"	"35.000"	"28.000"	"0.0149778679704862"	"22"	"0.001134"	"0.01397"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VISPGPNSQER"	"[R].vISPGPNSQER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM62"	"Palmdelphin OS=Rattus norvegicus OX=10116 GN=Palmd PE=1 SV=1"	"Q4KM62"	"Palmdelphin OS=Rattus norvegicus OX=10116 GN=Palmd PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"706.88892"	"1412.77056"	"1412.76951"	"0.74"	"0.00052"	"5/102"	"5"	"102"	"304962.190185547"	"HCD"	"MS2"	"100"	"18.1"	"100.000"	"34.1864"	"8904"	"8904"	"8873"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.9"	""	"20.1"	""	"21.1"	""	"30.1"	"0.8"	"41.5"	"36.2"	""	"712"	"4"	"35.000"	"28.000"	"12.9553752861286"	"13"	"0.006129"	"0.06983"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIGIDDVPDAR"	"[K].lIGIDDVPDAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88797"	"Disabled homolog 2 OS=Rattus norvegicus OX=10116 GN=Dab2 PE=1 SV=1"	"O88797"	"Disabled homolog 2 OS=Rattus norvegicus OX=10116 GN=Dab2 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"706.90027"	"1412.79326"	"1412.79466"	"-0.99"	"-0.00070"	"8/88"	"8"	"88"	"234517.021972656"	"HCD"	"MS2"	"22.51195"	"11.5"	"100.000"	"86.6894"	"30131"	"30131"	"30115"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.0"	""	"14.2"	""	"16.4"	""	"18.2"	""	"21.0"	"23.3"	""	"648"	"56"	"35.000"	"28.000"	"7.27017743305616E-05"	"24"	"0"	"0.0001327"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIGIDDVPDAR"	"[K].lIGIDDVPDAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88797"	"Disabled homolog 2 OS=Rattus norvegicus OX=10116 GN=Dab2 PE=1 SV=1"	"O88797"	"Disabled homolog 2 OS=Rattus norvegicus OX=10116 GN=Dab2 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"706.90045"	"1412.79363"	"1412.79466"	"-0.73"	"-0.00052"	"8/88"	"8"	"88"	"525802.397766113"	"HCD"	"MS2"	"3.503107"	"23.6"	"100.000"	"86.9905"	"30250"	"30250"	"30238"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.3"	""	"35.0"	""	"30.7"	""	"40.1"	"1.7"	"44.3"	"39.5"	""	"647"	"57"	"35.000"	"28.000"	"6.05165672408337E-05"	"25"	"0"	"4.666E-05"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIGIDDVPDAR"	"[K].lIGIDDVPDAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88797"	"Disabled homolog 2 OS=Rattus norvegicus OX=10116 GN=Dab2 PE=1 SV=1"	"O88797"	"Disabled homolog 2 OS=Rattus norvegicus OX=10116 GN=Dab2 PE=1 SV=1"	"0"	"2"	"2"	"0.8246"	"0.0000"	"1"	"1"	"1"	"706.90063"	"1412.79399"	"1412.79466"	"-0.47"	"-0.00033"	"8/88"	"8"	"88"	"347014.609313965"	"HCD"	"MS2"	"23.47745"	"16.7"	"100.000"	"86.7356"	"30153"	"30153"	"30130"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.0"	""	"21.5"	""	"22.8"	""	"31.0"	""	"30.9"	"32.8"	""	"646"	"57"	"35.000"	"28.000"	"7.11545247566266E-05"	"26"	"0"	"6.093E-05"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIGIDDVPDAR"	"[K].lIGIDDVPDAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88797"	"Disabled homolog 2 OS=Rattus norvegicus OX=10116 GN=Dab2 PE=1 SV=1"	"O88797"	"Disabled homolog 2 OS=Rattus norvegicus OX=10116 GN=Dab2 PE=1 SV=1"	"0"	"2"	"2"	"0.8364"	"0.0000"	"1"	"1"	"1"	"706.90082"	"1412.79436"	"1412.79466"	"-0.21"	"-0.00015"	"8/88"	"8"	"88"	"412526.403503418"	"HCD"	"MS2"	"6.950857"	"18.5"	"100.000"	"87.0343"	"30272"	"30272"	"30257"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.0"	""	"19.0"	""	"27.1"	""	"34.8"	""	"34.9"	"35.6"	""	"652"	"55"	"35.000"	"28.000"	"9.46711385355411E-05"	"25"	"0"	"0.0001917"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QELNEPPK"	"[K].qELNEPPk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"706.91016"	"1412.81304"	"1412.81495"	"-1.36"	"-0.00096"	"9/76"	"9"	"76"	"409276.438903809"	"HCD"	"MS2"	"0"	"36.4"	"100.000"	"41.6933"	"11948"	"11948"	"11926"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.3"	""	"35.4"	""	"31.4"	""	"81.1"	"0.6"	"72.5"	"69.4"	""	"560"	"25"	"34.000"	"27.000"	"0.0891575306083314"	"25"	"0.001546"	"0.01915"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QELNEPPK"	"[K].qELNEPPk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"706.91022"	"1412.81316"	"1412.81495"	"-1.27"	"-0.00090"	"11/76"	"11"	"76"	"701092.745727539"	"HCD"	"MS2"	"13.16029"	"54.8"	"100.000"	"41.2493"	"11777"	"11777"	"11760"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"73.5"	""	"58.8"	""	"58.5"	""	"119.1"	""	"108.1"	"105.8"	""	"560"	"34"	"34.000"	"27.000"	"0.0116723427371694"	"25"	"0.0001301"	"0.004846"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QELNEPPK"	"[K].qELNEPPk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"706.91052"	"1412.81377"	"1412.81495"	"-0.84"	"-0.00059"	"7/76"	"7"	"76"	"695700.92199707"	"HCD"	"MS2"	"33.47318"	"56.3"	"100.000"	"41.3947"	"11827"	"11827"	"11802"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.3"	""	"66.7"	""	"75.9"	""	"118.0"	""	"112.9"	"98.7"	""	"563"	"42"	"34.000"	"27.000"	"0.00180085356188365"	""	"0"	"0.002248"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEDELLAK"	"[R].hEDELLAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"471.60947"	"1412.81385"	"1412.81495"	"-0.78"	"-0.00037"	"6/60"	"6"	"60"	"10828179.0368652"	"HCD"	"MS2"	"42.94272"	"217.1"	"62.705"	"45.0451"	"13308"	"13308"	"13293"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"205.3"	""	"277.0"	""	"288.1"	""	"459.2"	""	"451.0"	"382.4"	""	"547"	"26"	"34.000"	"27.000"	"0.0666741258823854"	"16"	"0.0001301"	"0.00434"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEDELLAK"	"[R].hEDELLAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"471.60956"	"1412.81412"	"1412.81495"	"-0.59"	"-0.00028"	"6/60"	"6"	"60"	"7790959.57470703"	"HCD"	"MS2"	"44.87978"	"268.6"	"100.000"	"44.9440"	"13277"	"13277"	"13257"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"261.4"	""	"328.4"	""	"349.5"	""	"549.8"	""	"555.0"	"509.6"	""	"579"	"23"	"34.000"	"27.000"	"0.129911790385642"	"22"	"0"	"0.00286"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QELNEPPK"	"[K].qELNEPPk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"0"	"2"	"2"	"0.4062"	"0.0000"	"1"	"1"	"1"	"706.91095"	"1412.81462"	"1412.81495"	"-0.23"	"-0.00016"	"11/76"	"11"	"76"	"357941.530029297"	"HCD"	"MS2"	"0"	"29.0"	"100.000"	"41.5985"	"11920"	"11920"	"11889"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.8"	""	"24.1"	""	"33.9"	""	"72.5"	"0.3"	"53.8"	"51.7"	""	"566"	"32"	"34.000"	"27.000"	"0.0182720146816807"	""	"0.0002479"	"0.005412"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEDELLAK"	"[R].hEDELLAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"706.91125"	"1412.81523"	"1412.81495"	"0.20"	"0.00014"	"7/60"	"7"	"60"	"555416.87097168"	"HCD"	"MS2"	"31.42074"	"54.9"	"100.000"	"44.8677"	"13246"	"13246"	"13227"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.3"	""	"65.2"	""	"71.8"	""	"103.9"	""	"111.7"	"100.8"	""	"563"	"29"	"34.000"	"27.000"	"0.0371089271903628"	"15"	"0"	"0.002686"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIEIYTDMGR"	"[R].aIEIYTDmGR.[F]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P54921"	"Alpha-soluble NSF attachment protein OS=Rattus norvegicus OX=10116 GN=Napa PE=1 SV=2"	"P54921"	"Alpha-soluble NSF attachment protein OS=Rattus norvegicus OX=10116 GN=Napa PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"707.36383"	"1413.72038"	"1413.72453"	"-2.93"	"-0.00207"	"6/80"	"6"	"80"	"222496.343444824"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"61.3955"	"19949"	"19949"	"19921"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.9"	""	"13.3"	""	"16.8"	""	"28.1"	""	"24.2"	"29.8"	""	"629"	"9"	"34.000"	"27.000"	"4.44243057783857"	"13"	"0.00447"	"0.04883"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIEIYTDMGR"	"[R].aIEIYTDmGR.[F]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P54921"	"Alpha-soluble NSF attachment protein OS=Rattus norvegicus OX=10116 GN=Napa PE=1 SV=2"	"P54921"	"Alpha-soluble NSF attachment protein OS=Rattus norvegicus OX=10116 GN=Napa PE=1 SV=2"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"707.36523"	"1413.72319"	"1413.72453"	"-0.95"	"-0.00067"	"7/80"	"7"	"80"	"196595.033813477"	"HCD"	"MS2"	"0"	"12.7"	"100.000"	"61.7516"	"20079"	"20079"	"20049"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.1"	""	"16.2"	""	"18.7"	""	"22.9"	""	"24.0"	"24.8"	""	"615"	"37"	"34.000"	"27.000"	"0.00674287517620263"	"18"	"0"	"0.001835"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGYENESK"	"[R].eGYENESk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"707.36523"	"1413.72319"	"1413.72620"	"-2.12"	"-0.00150"	"11/74"	"11"	"74"	"485085.497436523"	"HCD"	"MS2"	"0"	"48.4"	"100.000"	"30.9599"	"7605"	"7605"	"7585"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.2"	""	"48.4"	""	"52.7"	""	"72.6"	"0.2"	"103.7"	"92.2"	""	"615"	"29"	"34.000"	"27.000"	"0.0395225647932662"	"22"	"0.0008629"	"0.01062"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGYENESK"	"[R].eGYENESk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"707.36633"	"1413.72539"	"1413.72620"	"-0.57"	"-0.00040"	"7/74"	"7"	"74"	"302731.139953613"	"HCD"	"MS2"	"100"	"33.3"	"100.000"	"30.9809"	"7602"	"7602"	"7578"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.6"	""	"32.2"	""	"32.5"	""	"48.5"	""	"74.8"	"72.9"	""	"636"	"3"	"35.000"	"28.000"	"16.9210426446841"	"13"	"0.008641"	"0.1073"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSDSIAYDK"	"[R].gSDSIAYDk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"707.38239"	"1413.75749"	"1413.76258"	"-3.60"	"-0.00254"	"8/76"	"8"	"76"	"728699.704284668"	"HCD"	"MS2"	"0"	"62.4"	"100.000"	"46.5422"	"13929"	"13929"	"13908"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"80.7"	""	"73.5"	""	"65.8"	""	"97.0"	""	"136.7"	"144.3"	""	"654"	"26"	"35.000"	"28.000"	"0.0844399082337513"	"22"	"0"	"0.002628"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSDSIAYDK"	"[R].gSDSIAYDk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"707.38434"	"1413.76140"	"1413.76258"	"-0.84"	"-0.00059"	"8/76"	"8"	"76"	"1795417.17474365"	"HCD"	"MS2"	"0"	"161.8"	"100.000"	"46.4670"	"13887"	"13887"	"13868"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"219.9"	""	"159.7"	""	"179.3"	""	"268.3"	""	"346.4"	"365.5"	""	"629"	"57"	"34.000"	"27.000"	"5.85626404480473E-05"	""	"0"	"0.0001788"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSDSIAYDK"	"[R].gSDSIAYDk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.5952"	"0.0000"	"1"	"1"	"1"	"707.38531"	"1413.76335"	"1413.76258"	"0.55"	"0.00039"	"7/76"	"7"	"76"	"1528684.30767822"	"HCD"	"MS2"	"7.710465"	"139.5"	"100.000"	"46.2419"	"13807"	"13807"	"13785"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"175.4"	""	"136.7"	""	"150.8"	""	"250.6"	""	"313.3"	"301.1"	""	"646"	"42"	"35.000"	"28.000"	"0.00190634948895506"	""	"0"	"0.0002335"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSDSIAYDK"	"[R].gSDSIAYDk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"707.38715"	"1413.76702"	"1413.76258"	"3.14"	"0.00222"	"7/76"	"7"	"76"	"531974.281494141"	"HCD"	"MS2"	"100"	"45.0"	"100.000"	"46.7808"	"14014"	"14014"	"13996"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.0"	""	"53.1"	""	"43.8"	""	"70.4"	""	"92.2"	"108.2"	""	"691"	"15"	"35.000"	"28.000"	"1.08754704252201"	"20"	"0.0001301"	"0.004317"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTPQVISAAR"	"[R].eLTPQVISAAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"707.41565"	"1413.82402"	"1413.82629"	"-1.61"	"-0.00114"	"10/106"	"10"	"106"	"736883.346984863"	"HCD"	"MS2"	"8.318366"	"41.8"	"100.000"	"65.7872"	"21726"	"21726"	"21702"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.1"	""	"46.0"	""	"56.5"	""	"85.8"	""	"74.0"	"72.9"	""	"626"	"44"	"34.000"	"27.000"	"0.00125182706675224"	"24"	"0"	"0.0006266"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTPQVISAAR"	"[R].eLTPQVISAAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"707.41626"	"1413.82524"	"1413.82629"	"-0.74"	"-0.00053"	"10/106"	"10"	"106"	"1042455.46972656"	"HCD"	"MS2"	"10.75676"	"51.4"	"100.000"	"66.1321"	"21851"	"21851"	"21832"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.9"	""	"54.7"	""	"62.7"	""	"87.4"	"0.4"	"102.7"	"112.2"	""	"625"	"45"	"34.000"	"27.000"	"0.000915904139140727"	"26"	"0"	"0.00129"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTPQVISAAR"	"[R].eLTPQVISAAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"707.41632"	"1413.82536"	"1413.82629"	"-0.66"	"-0.00046"	"10/106"	"10"	"106"	"966817.122558594"	"HCD"	"MS2"	"5.556457"	"50.1"	"100.000"	"66.0891"	"21849"	"21849"	"21828"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.5"	""	"55.4"	""	"61.1"	""	"90.1"	""	"86.2"	"115.5"	""	"632"	"41"	"34.000"	"28.000"	"0.0024081696716803"	"25"	"0"	"0.0008348"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTPQVISAAR"	"[R].eLTPQVISAAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"707.41638"	"1413.82549"	"1413.82629"	"-0.57"	"-0.00040"	"6/106"	"6"	"106"	"614704.13671875"	"HCD"	"MS2"	"22.12344"	"36.7"	"100.000"	"65.8325"	"21729"	"21729"	"21708"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.4"	""	"48.9"	""	"51.1"	""	"57.7"	"1.7"	"64.2"	"72.7"	""	"632"	"32"	"34.000"	"28.000"	"0.0214134716404973"	"25"	"0.002379"	"0.02452"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTPEERPK"	"[K].vTPEERPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"471.95288"	"1413.84409"	"1413.84659"	"-1.77"	"-0.00083"	"9/66"	"9"	"66"	"15618438.3598022"	"HCD"	"MS2"	"28.69825"	"627.1"	"82.061"	"28.5201"	"6617"	"6617"	"6598"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"955.8"	""	"839.7"	""	"880.2"	""	"980.5"	"7.6"	"1117.7"	"1157.0"	""	"531"	"13"	"34.000"	"27.000"	"1.39657584226732"	"16"	"0.009594"	"0.1255"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAGDNLGALVR"	"[R].aEAGDNLGALVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"707.89478"	"1414.78227"	"1414.78516"	"-2.04"	"-0.00144"	"10/106"	"10"	"106"	"3013310.66290283"	"HCD"	"MS2"	"0"	"140.2"	"100.000"	"65.4666"	"21595"	"21595"	"21577"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"231.9"	""	"187.8"	""	"197.0"	""	"229.1"	""	"225.7"	"257.4"	""	"789"	"57"	"35.000"	"28.000"	"8.11048840115744E-05"	"24"	"0"	"1.949E-06"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAGDNLGALVR"	"[R].aEAGDNLGALVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"707.89514"	"1414.78301"	"1414.78516"	"-1.52"	"-0.00108"	"11/106"	"11"	"106"	"2842809.5614624"	"HCD"	"MS2"	"0"	"132.6"	"100.000"	"65.5536"	"21615"	"21615"	"21597"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"223.9"	""	"167.2"	""	"193.2"	""	"196.4"	""	"225.4"	"254.3"	""	"791"	"60"	"35.000"	"28.000"	"4.0192635803036E-05"	"24"	"0"	"2.07E-06"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAGDNLGALVR"	"[R].aEAGDNLGALVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.9275"	"0.0000"	"1"	"1"	"1"	"707.89520"	"1414.78313"	"1414.78516"	"-1.43"	"-0.00101"	"10/106"	"10"	"106"	"1391419.92425537"	"HCD"	"MS2"	"6.578936"	"77.4"	"100.000"	"65.2539"	"21493"	"21493"	"21470"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"138.0"	"2.1"	"102.3"	""	"107.4"	""	"129.3"	"1.3"	"115.8"	"135.2"	""	"791"	"69"	"35.000"	"28.000"	"5.1185445529347E-06"	"22"	"0"	"2.061E-07"	"1.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAGDNLGALVR"	"[R].aEAGDNLGALVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"707.89557"	"1414.78386"	"1414.78516"	"-0.92"	"-0.00065"	"11/106"	"11"	"106"	"1398435.7288208"	"HCD"	"MS2"	"0"	"80.1"	"100.000"	"65.1692"	"21474"	"21474"	"21453"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"135.2"	""	"107.3"	""	"111.3"	""	"128.0"	""	"131.3"	"149.5"	""	"795"	"57"	"35.000"	"29.000"	"7.48750513072196E-05"	"24"	"0"	"1.23E-06"	"1.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQQLNEEVGR"	"[R].iQQLNEEVGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"707.89563"	"1414.78398"	"1414.78516"	"-0.83"	"-0.00059"	"7/90"	"7"	"90"	"561777.746520996"	"HCD"	"MS2"	"0"	"31.9"	"100.000"	"57.0681"	"18218"	"18218"	"18195"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.4"	""	"43.0"	""	"37.5"	""	"51.8"	"1.5"	"64.0"	"64.1"	""	"795"	"42"	"35.000"	"29.000"	"0.00258426551911379"	"18"	"0"	"0.0009028"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQQLNEEVGR"	"[R].iQQLNEEVGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"707.89581"	"1414.78435"	"1414.78516"	"-0.57"	"-0.00040"	"8/90"	"8"	"90"	"481578.119934082"	"HCD"	"MS2"	"0"	"27.0"	"100.000"	"57.2498"	"18278"	"18278"	"18254"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.7"	""	"39.4"	""	"36.4"	""	"47.9"	""	"47.7"	"48.8"	""	"804"	"39"	"36.000"	"29.000"	"0.004833103027162"	"17"	"0"	"0.0002544"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVSELPSVVR"	"[R].aEVSELPSVVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"707.90808"	"1414.80889"	"1414.81031"	"-1.01"	"-0.00071"	"10/92"	"10"	"92"	"1424076.26055908"	"HCD"	"MS2"	"0"	"40.9"	"100.000"	"71.2587"	"23942"	"23942"	"23923"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.0"	""	"55.6"	""	"53.9"	""	"63.3"	"0.6"	"77.9"	"75.6"	""	"751"	"48"	"35.000"	"28.000"	"0.00058831502682561"	"21"	"0"	"7.656E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVSELPSVVR"	"[R].aEVSELPSVVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"707.90814"	"1414.80901"	"1414.81031"	"-0.92"	"-0.00065"	"13/92"	"13"	"92"	"1425259.28637695"	"HCD"	"MS2"	"3.720643"	"58.8"	"100.000"	"71.1396"	"23907"	"23907"	"23889"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"98.0"	""	"77.0"	""	"83.2"	""	"87.0"	"1.6"	"102.4"	"107.6"	""	"751"	"45"	"35.000"	"28.000"	"0.00116040593490885"	"21"	"0"	"5.307E-06"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVSELPSVVR"	"[R].aEVSELPSVVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"707.90820"	"1414.80913"	"1414.81031"	"-0.83"	"-0.00059"	"8/92"	"8"	"92"	"807393.963928223"	"HCD"	"MS2"	"4.370428"	"37.6"	"100.000"	"71.4391"	"24029"	"24029"	"24010"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.6"	""	"50.3"	""	"46.9"	""	"61.5"	""	"69.8"	"72.0"	""	"751"	"48"	"35.000"	"28.000"	"0.000640633937070673"	"19"	"0"	"2.203E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVNEAELLR"	"[K].lEVNEAELLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"707.90826"	"1414.80925"	"1414.81031"	"-0.75"	"-0.00053"	"8/94"	"8"	"94"	"196493.438537598"	"HCD"	"MS2"	"9.361671"	"11.2"	"100.000"	"88.1395"	"30701"	"30701"	"30685"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.5"	""	"9.6"	""	"15.1"	""	"17.0"	""	"27.5"	"24.5"	""	"750"	"54"	"35.000"	"28.000"	"0.000134595725491877"	"28"	"0"	"0.0001159"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVSELPSVVR"	"[R].aEVSELPSVVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"707.90857"	"1414.80986"	"1414.81031"	"-0.32"	"-0.00022"	"13/92"	"13"	"92"	"606175.590454102"	"HCD"	"MS2"	"3.67714"	"30.8"	"100.000"	"71.5837"	"24074"	"24074"	"24056"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.1"	""	"42.5"	""	"41.1"	""	"48.2"	""	"60.8"	"54.7"	""	"758"	"38"	"35.000"	"28.000"	"0.00618926688251953"	"16"	"0"	"0.000769"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVNEAELLR"	"[K].lEVNEAELLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"707.90863"	"1414.80998"	"1414.81031"	"-0.23"	"-0.00016"	"15/94"	"15"	"94"	"771725.65612793"	"HCD"	"MS2"	"0"	"39.8"	"100.000"	"87.5628"	"30474"	"30474"	"30461"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.3"	""	"44.8"	""	"38.5"	""	"61.2"	""	"90.7"	"97.3"	""	"758"	"46"	"35.000"	"28.000"	"0.000963028655403186"	"27"	"0"	"5.187E-05"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVNEAELLR"	"[K].lEVNEAELLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"707.90894"	"1414.81059"	"1414.81031"	"0.20"	"0.00014"	"8/94"	"8"	"94"	"230452.043457031"	"HCD"	"MS2"	"5.345201"	"13.4"	"100.000"	"88.1302"	"30702"	"30702"	"30690"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.6"	""	"18.0"	""	"14.3"	""	"23.0"	""	"26.8"	"30.9"	""	"759"	"48"	"35.000"	"28.000"	"0.000546024060448093"	"25"	"0"	"0.0004534"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVNEAELLR"	"[K].lEVNEAELLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.7963"	"0.0000"	"1"	"1"	"1"	"707.90894"	"1414.81059"	"1414.81031"	"0.20"	"0.00014"	"8/94"	"8"	"94"	"2809437.65478516"	"HCD"	"MS2"	"0"	"118.7"	"100.000"	"87.8526"	"30588"	"30588"	"30577"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"135.9"	""	"127.4"	""	"138.3"	""	"186.3"	"0.5"	"257.5"	"283.0"	""	"759"	"54"	"35.000"	"28.000"	"0.00016951642322129"	"27"	"0"	"0.0001002"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVNEAELLR"	"[K].lEVNEAELLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.7843"	"0.0000"	"1"	"1"	"1"	"707.90900"	"1414.81072"	"1414.81031"	"0.29"	"0.00020"	"8/94"	"8"	"94"	"403763.270019531"	"HCD"	"MS2"	"10.89523"	"20.8"	"100.000"	"87.5325"	"30468"	"30468"	"30450"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.7"	""	"29.3"	""	"22.4"	""	"35.0"	""	"48.2"	"42.3"	""	"762"	"51"	"35.000"	"28.000"	"0.000277923311406991"	"27"	"0"	"0.000129"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVNEAELLR"	"[K].lEVNEAELLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.7736"	"0.0000"	"1"	"1"	"1"	"707.90900"	"1414.81072"	"1414.81031"	"0.29"	"0.00020"	"9/94"	"9"	"94"	"3417400.58898926"	"HCD"	"MS2"	"0"	"146.5"	"100.000"	"87.8385"	"30588"	"30588"	"30576"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"150.7"	""	"169.4"	""	"157.7"	""	"259.6"	"2.9"	"311.4"	"342.0"	""	"762"	"53"	"35.000"	"28.000"	"0.000202733246780649"	"27"	"0"	"9.798E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLDDDRGPWR"	"[R].gLDDDRGPWR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"472.57877"	"1415.72174"	"1415.72289"	"-0.81"	"-0.00038"	"5/84"	"5"	"84"	"1536683.25415039"	"HCD"	"MS2"	"37.35892"	"68.4"	"100.000"	"45.2523"	"13392"	"13392"	"13371"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.6"	""	"65.7"	""	"88.6"	""	"150.9"	"3.2"	"150.3"	"124.7"	""	"607"	"8"	"34.000"	"27.000"	"5.23791800219027"	"13"	"0.006739"	"0.07646"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPQEPIMK"	"[K].dPQEPIMk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"708.40173"	"1415.79619"	"1415.79686"	"-0.47"	"-0.00033"	"7/72"	"7"	"72"	"980513.209228516"	"HCD"	"MS2"	"0"	"76.1"	"100.000"	"53.6508"	"16816"	"16816"	"16785"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"102.2"	""	"98.9"	""	"96.2"	""	"100.1"	"0.4"	"166.1"	"158.6"	""	"901"	"24"	"36.000"	"29.000"	"0.168149196086972"	""	"0.0006732"	"0.00908"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPQEPIMK"	"[K].dPQEPIMk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"708.40179"	"1415.79631"	"1415.79686"	"-0.39"	"-0.00027"	"7/72"	"7"	"72"	"840433.977905273"	"HCD"	"MS2"	"12.8397"	"67.9"	"100.000"	"53.3556"	"16706"	"16706"	"16684"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.7"	""	"83.8"	"2.0"	"91.5"	""	"93.2"	"0.6"	"143.1"	"152.1"	""	"901"	"30"	"36.000"	"29.000"	"0.0496243458948407"	"27"	"0.001374"	"0.01598"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RAPGDQGEK"	"[K].rAPGDQGEk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"472.60477"	"1415.79975"	"1415.80070"	"-0.67"	"-0.00032"	"6/86"	"6"	"86"	"3122827.99499512"	"HCD"	"MS2"	"16.34081"	"174.7"	"100.000"	"21.0855"	"3592"	"3592"	"3573"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"187.8"	""	"155.7"	""	"166.6"	""	"337.4"	""	"420.2"	"399.3"	""	"885"	"18"	"36.000"	"29.000"	"0.737756891553845"	"14"	"0.001728"	"0.02019"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEQLELTLGR"	"[R].qEQLELTLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"708.40515"	"1415.80303"	"1415.80556"	"-1.79"	"-0.00127"	"6/100"	"6"	"100"	"302135.408508301"	"HCD"	"MS2"	"44.51013"	"17.8"	"100.000"	"71.9302"	"24229"	"24229"	"24198"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.2"	""	"17.0"	""	"25.1"	""	"30.1"	""	"34.0"	"42.1"	""	"895"	"21"	"36.000"	"29.000"	"0.393362576281821"	"16"	"0.0003538"	"0.007018"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANIEQATGIR"	"[R].lAnIEQATGIR.[L]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9Z2Q4"	"Methionine synthase OS=Rattus norvegicus OX=10116 GN=Mtr PE=1 SV=1"	"Q9Z2Q4"	"Methionine synthase OS=Rattus norvegicus OX=10116 GN=Mtr PE=1 SV=1"	"0"	"2"	"2"	"0.1000"	"0.0000"	"1"	"1"	"1"	"708.40625"	"1415.80522"	"1415.80556"	"-0.24"	"-0.00017"	"4/102"	"4"	"102"	"505667.942382813"	"HCD"	"MS2"	"11.03416"	"28.9"	"100.000"	"74.7875"	"25389"	"25389"	"25375"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.1"	""	"26.3"	""	"33.7"	"2.4"	"48.2"	""	"58.7"	"76.8"	""	"898"	"20"	"36.000"	"29.000"	"0.496874079005972"	""	"0.005001"	"0.05631"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANIEQATGIR"	"[R].lAnIEQATGIR.[L]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9Z2Q4"	"Methionine synthase OS=Rattus norvegicus OX=10116 GN=Mtr PE=1 SV=1"	"Q9Z2Q4"	"Methionine synthase OS=Rattus norvegicus OX=10116 GN=Mtr PE=1 SV=1"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"1"	"708.40631"	"1415.80535"	"1415.80556"	"-0.15"	"-0.00011"	"5/102"	"5"	"102"	"483588.786315918"	"HCD"	"MS2"	"12.10575"	"25.3"	"100.000"	"74.9266"	"25428"	"25428"	"25409"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.8"	""	"26.0"	""	"27.4"	""	"44.3"	""	"53.5"	"65.4"	""	"898"	"16"	"36.000"	"29.000"	"1.19191789732702"	"25"	"0.004205"	"0.04611"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANIEQATGIR"	"[R].lAnIEQATGIR.[L]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9Z2Q4"	"Methionine synthase OS=Rattus norvegicus OX=10116 GN=Mtr PE=1 SV=1"	"Q9Z2Q4"	"Methionine synthase OS=Rattus norvegicus OX=10116 GN=Mtr PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"7"	"708.40674"	"1415.80620"	"1415.80556"	"0.45"	"0.00032"	"3/102"	"3"	"102"	"205177.425842285"	"HCD"	"MS2"	"28.61916"	"11.4"	"100.000"	"75.8571"	"25806"	"25806"	"25778"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.6"	""	"13.8"	""	"17.0"	""	"20.4"	""	"22.3"	"24.2"	""	"896"	"5"	"36.000"	"29.000"	"13.1002026527381"	"14"	"0.005617"	"0.06417"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEQLELTLGR"	"[R].qEQLELTLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"708.40674"	"1415.80620"	"1415.80556"	"0.45"	"0.00032"	"8/100"	"8"	"100"	"382692.008666992"	"HCD"	"MS2"	"43.51948"	"22.9"	"100.000"	"72.1233"	"24294"	"24294"	"24266"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.9"	""	"26.5"	""	"24.5"	""	"32.9"	""	"49.7"	"58.8"	""	"896"	"26"	"36.000"	"29.000"	"0.112791926363597"	"23"	"0"	"0.0007638"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEGGFEYK"	"[R].eEGGFEYk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4AEF8"	"Coatomer subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Copg1 PE=2 SV=1"	"Q4AEF8"	"Coatomer subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Copg1 PE=2 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"708.87292"	"1416.73857"	"1416.74112"	"-1.80"	"-0.00127"	"6/66"	"6"	"66"	"1334909.46856689"	"HCD"	"MS2"	"0"	"133.3"	"100.000"	"54.5717"	"17200"	"17200"	"17177"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"218.9"	""	"154.3"	""	"160.3"	""	"233.4"	"0.9"	"263.9"	"232.0"	""	"799"	"29"	"36.000"	"29.000"	"0.0561715985889901"	"20"	"0.0008629"	"0.01024"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDFTEFGK"	"[R].dDFTEFGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"708.87335"	"1416.73943"	"1416.74112"	"-1.19"	"-0.00084"	"11/64"	"11"	"64"	"294429.35546875"	"HCD"	"MS2"	"0"	"29.1"	"100.000"	"78.5981"	"26920"	"26920"	"26898"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.9"	""	"38.4"	""	"39.2"	""	"49.6"	""	"59.1"	"54.8"	""	"795"	"34"	"35.000"	"29.000"	"0.0157883640914103"	"17"	"0.002973"	"0.02967"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDFTEFGK"	"[R].dDFTEFGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"708.87372"	"1416.74016"	"1416.74112"	"-0.68"	"-0.00048"	"6/64"	"6"	"64"	"247919.656616211"	"HCD"	"MS2"	"0"	"24.0"	"100.000"	"78.6629"	"26941"	"26941"	"26922"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.9"	""	"26.7"	""	"31.2"	""	"44.0"	""	"47.9"	"44.6"	""	"801"	"27"	"36.000"	"29.000"	"0.0888387666129987"	"14"	"0.002973"	"0.02941"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDFTEFGK"	"[R].dDFTEFGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"708.87372"	"1416.74016"	"1416.74112"	"-0.68"	"-0.00048"	"7/64"	"7"	"64"	"623157.130126953"	"HCD"	"MS2"	"0"	"62.5"	"100.000"	"78.3563"	"26817"	"26817"	"26797"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.7"	""	"80.6"	""	"78.2"	""	"115.0"	"1.5"	"124.8"	"100.5"	""	"801"	"45"	"36.000"	"29.000"	"0.0012811574914314"	"19"	"0"	"0.002987"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDFTEFGK"	"[R].dDFTEFGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"708.87378"	"1416.74028"	"1416.74112"	"-0.59"	"-0.00042"	"12/64"	"12"	"64"	"478264.197875977"	"HCD"	"MS2"	"0"	"50.8"	"100.000"	"78.2817"	"26793"	"26793"	"26779"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"72.3"	""	"65.7"	""	"65.8"	""	"96.4"	"3.8"	"95.0"	"82.3"	""	"801"	"40"	"36.000"	"29.000"	"0.00424231116933504"	"20"	"0"	"0.003102"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEGGFEYK"	"[R].eEGGFEYk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4AEF8"	"Coatomer subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Copg1 PE=2 SV=1"	"Q4AEF8"	"Coatomer subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Copg1 PE=2 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"708.87384"	"1416.74040"	"1416.74112"	"-0.50"	"-0.00036"	"7/66"	"7"	"66"	"1312044.16192627"	"HCD"	"MS2"	"0"	"133.6"	"100.000"	"54.8172"	"17287"	"17287"	"17264"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"194.3"	""	"158.7"	""	"171.7"	""	"220.5"	""	"272.3"	"251.3"	""	"801"	"16"	"36.000"	"29.000"	"0.98084982835882"	"19"	"0.001374"	"0.01701"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"709.33398"	"1417.66069"	"1417.66193"	"-0.87"	"-0.00062"	"9/80"	"9"	"80"	"2148985.25714111"	"HCD"	"MS2"	"17.45788"	"79.6"	"100.000"	"51.5779"	"15969"	"15969"	"15947"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"111.6"	""	"101.6"	""	"123.6"	""	"150.4"	""	"134.3"	"136.6"	""	"288"	"41"	"31.000"	"24.000"	"0.00119498510522077"	"18"	"0.0001301"	"0.004408"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"709.33398"	"1417.66069"	"1417.66193"	"-0.87"	"-0.00062"	"9/80"	"9"	"80"	"2204594.76245117"	"HCD"	"MS2"	"24.0718"	"84.8"	"100.000"	"51.2362"	"15841"	"15841"	"15815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"129.8"	""	"105.5"	""	"121.2"	""	"160.0"	""	"148.5"	"137.3"	""	"288"	"36"	"31.000"	"24.000"	"0.00369285701258552"	"18"	"0.0001301"	"0.004011"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"709.33423"	"1417.66118"	"1417.66193"	"-0.53"	"-0.00038"	"9/80"	"9"	"80"	"2687037.984375"	"HCD"	"MS2"	"0"	"93.3"	"100.000"	"52.1645"	"16209"	"16209"	"16192"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"126.2"	""	"119.8"	""	"139.9"	""	"172.2"	"1.3"	"167.2"	"156.6"	""	"292"	"42"	"31.000"	"24.000"	"0.000971298808054541"	"16"	"0"	"0.002569"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"709.33441"	"1417.66155"	"1417.66193"	"-0.27"	"-0.00019"	"8/80"	"8"	"80"	"2842201.8682251"	"HCD"	"MS2"	"0"	"94.1"	"100.000"	"51.8415"	"16088"	"16088"	"16069"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"135.4"	""	"114.2"	""	"128.2"	""	"179.8"	"1.6"	"164.4"	"167.1"	""	"291"	"39"	"31.000"	"24.000"	"0.00196274099417086"	"16"	"0"	"0.0008134"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"709.33447"	"1417.66167"	"1417.66193"	"-0.19"	"-0.00013"	"9/80"	"9"	"80"	"6307807.71490479"	"HCD"	"MS2"	"1.925683"	"189.9"	"100.000"	"51.8773"	"16092"	"16092"	"16075"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"261.0"	""	"234.0"	""	"264.7"	""	"372.0"	""	"354.5"	"312.4"	""	"293"	"41"	"31.000"	"24.000"	"0.00129073659895674"	"19"	"0.0001301"	"0.004761"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.33478"	"1417.66228"	"1417.66193"	"0.24"	"0.00017"	"8/80"	"8"	"80"	"6567638.8717041"	"HCD"	"MS2"	"1.997058"	"204.1"	"100.000"	"51.5221"	"15958"	"15958"	"15941"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"281.2"	""	"238.6"	""	"301.2"	""	"405.6"	""	"376.5"	"332.0"	""	"295"	"37"	"31.000"	"24.000"	"0.002916030219165"	"15"	"0"	"0.00309"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVMQEEFSR"	"[K].fVmQEEFSR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"709.35193"	"1417.69658"	"1417.69832"	"-1.22"	"-0.00087"	"7/80"	"7"	"80"	"1582775.12359619"	"HCD"	"MS2"	"24.9794"	"69.7"	"100.000"	"58.8390"	"18925"	"18925"	"18904"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"64.5"	""	"69.5"	""	"74.4"	""	"195.9"	"0.2"	"124.0"	"133.0"	""	"554"	"29"	"34.000"	"27.000"	"0.0347120105458773"	"18"	"0.0002479"	"0.00582"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVMQEEFSR"	"[K].fVmQEEFSR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"709.35205"	"1417.69682"	"1417.69832"	"-1.05"	"-0.00075"	"6/80"	"6"	"80"	"2095648.0322876"	"HCD"	"MS2"	"15.96305"	"89.2"	"100.000"	"58.6621"	"18868"	"18868"	"18847"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"80.2"	""	"75.1"	""	"104.2"	""	"284.8"	"1.4"	"156.3"	"143.4"	""	"552"	"24"	"34.000"	"27.000"	"0.0986073033299324"	"20"	"0.0008629"	"0.01114"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVMQEEFSR"	"[K].fVmQEEFSR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"709.35211"	"1417.69695"	"1417.69832"	"-0.97"	"-0.00069"	"6/80"	"6"	"80"	"3019552.69348145"	"HCD"	"MS2"	"15.15328"	"130.1"	"100.000"	"59.1451"	"19050"	"19050"	"19032"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"108.9"	""	"127.6"	""	"143.3"	""	"360.9"	""	"247.9"	"248.6"	""	"552"	"23"	"34.000"	"27.000"	"0.136429749608367"	"18"	"0.0003538"	"0.006789"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVMQEEFSR"	"[K].fVmQEEFSR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.35223"	"1417.69719"	"1417.69832"	"-0.79"	"-0.00056"	"8/80"	"8"	"80"	"1710183.92852783"	"HCD"	"MS2"	"18.42328"	"95.0"	"100.000"	"59.4491"	"19175"	"19175"	"19158"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.8"	""	"98.1"	""	"96.8"	""	"242.7"	""	"199.7"	"177.9"	""	"549"	"18"	"34.000"	"27.000"	"0.390429252065214"	"14"	"0.005427"	"0.06264"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVMQEEFSR"	"[K].fVmQEEFSR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"709.35242"	"1417.69756"	"1417.69832"	"-0.54"	"-0.00038"	"6/80"	"6"	"80"	"1427117.58575439"	"HCD"	"MS2"	"18.64655"	"80.8"	"100.000"	"59.2629"	"19113"	"19113"	"19094"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.0"	""	"82.5"	""	"90.9"	""	"187.0"	""	"163.5"	"156.4"	""	"554"	"21"	"34.000"	"27.000"	"0.198371724628974"	"15"	"0.000936"	"0.01335"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVMQEEFSR"	"[K].fVmQEEFSR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"709.35272"	"1417.69817"	"1417.69832"	"-0.11"	"-0.00007"	"6/80"	"6"	"80"	"3439293.41540527"	"HCD"	"MS2"	"21.1359"	"139.7"	"100.000"	"58.9660"	"18992"	"18992"	"18975"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"122.6"	""	"127.0"	""	"152.3"	""	"365.0"	""	"287.2"	"273.6"	""	"549"	"19"	"34.000"	"27.000"	"0.31955259507318"	"18"	"0.001211"	"0.01433"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TELEENPK"	"[K].tELEENPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4KLJ8"	"Phosducin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Pdcl3 PE=1 SV=1"	"Q4KLJ8"	"Phosducin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Pdcl3 PE=1 SV=1"	"0"	"2"	"2"	"0.3043"	"0.0000"	"1"	"1"	"3"	"709.39893"	"1417.79057"	"1417.79388"	"-2.33"	"-0.00165"	"11/68"	"11"	"68"	"332151.256469727"	"HCD"	"MS2"	"0"	"30.1"	"100.000"	"42.4080"	"12251"	"12251"	"12220"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.9"	""	"31.2"	""	"33.5"	""	"45.5"	""	"58.8"	"76.7"	""	"996"	"23"	"36.000"	"29.000"	"0.240563283415807"	""	"0.001546"	"0.01915"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TELEENPK"	"[K].tELEENPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4KLJ8"	"Phosducin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Pdcl3 PE=1 SV=1"	"Q4KLJ8"	"Phosducin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Pdcl3 PE=1 SV=1"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"709.40088"	"1417.79448"	"1417.79388"	"0.42"	"0.00030"	"6/68"	"6"	"68"	"278228.274230957"	"HCD"	"MS2"	"0"	"27.8"	"100.000"	"42.5647"	"12304"	"12304"	"12277"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.5"	""	"24.2"	""	"37.9"	""	"34.1"	""	"47.8"	"82.6"	""	"1028"	"29"	"37.000"	"30.000"	"0.0579379492474212"	"30"	"0.001886"	"0.02165"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDTIEIITDR"	"[K].iDTIEIITDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6512"	"0.0000"	"1"	"1"	"1"	"709.40808"	"1417.80889"	"1417.80998"	"-0.77"	"-0.00055"	"9/86"	"9"	"86"	"568135.732055664"	"HCD"	"MS2"	"0"	"30.1"	"100.000"	"99.6784"	"34873"	"34873"	"34869"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.9"	""	"25.2"	""	"25.9"	""	"64.2"	""	"72.1"	"73.3"	""	"1024"	"43"	"37.000"	"30.000"	"0.00270563968908892"	"30"	"0"	"0.0001118"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDTIEIITDR"	"[K].iDTIEIITDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"709.40814"	"1417.80901"	"1417.80998"	"-0.68"	"-0.00048"	"5/86"	"5"	"86"	"203975.579711914"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"99.1575"	"34720"	"34720"	"34716"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.8"	""	"3.5"	""	"10.6"	""	"13.5"	""	"12.6"	"18.4"	""	"1024"	"29"	"37.000"	"30.000"	"0.0614143643212482"	"24"	"0.0003538"	"0.006551"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDTIEIITDR"	"[K].iDTIEIITDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6047"	"0.0000"	"1"	"1"	"1"	"709.40845"	"1417.80962"	"1417.80998"	"-0.25"	"-0.00018"	"7/86"	"7"	"86"	"1337544.79144287"	"HCD"	"MS2"	"0"	"62.6"	"100.000"	"99.4093"	"34793"	"34793"	"34790"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.7"	""	"47.9"	""	"40.0"	""	"141.8"	""	"155.0"	"155.9"	""	"1019"	"43"	"37.000"	"30.000"	"0.00235041304238513"	""	"0"	"0.0002745"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDTIEIITDR"	"[K].iDTIEIITDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6042"	"0.0000"	"1"	"1"	"1"	"709.40863"	"1417.80998"	"1417.80998"	"0.01"	"0.00000"	"9/86"	"9"	"86"	"752637.362426758"	"HCD"	"MS2"	"1.099797"	"37.9"	"100.000"	"99.6578"	"34902"	"34902"	"34898"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.9"	""	"33.7"	""	"29.5"	""	"85.7"	""	"90.1"	"89.0"	""	"1019"	"48"	"37.000"	"30.000"	"0.000724676517039078"	""	"0"	"7.713E-05"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDTIEIITDR"	"[K].iDTIEIITDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"709.40863"	"1417.80998"	"1417.80998"	"0.01"	"0.00000"	"8/86"	"8"	"86"	"1549081.11737061"	"HCD"	"MS2"	"0"	"72.9"	"100.000"	"99.4043"	"34827"	"34827"	"34820"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"72.2"	""	"46.0"	""	"48.0"	""	"177.5"	"0.7"	"169.3"	"181.1"	""	"1019"	"54"	"37.000"	"30.000"	"0.00019017095539692"	""	"0"	"2.054E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPAAAAAAPPGPR"	"[K].aAPAAAAAAPPGPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.40894"	"1417.81059"	"1417.81131"	"-0.51"	"-0.00036"	"10/106"	"10"	"106"	"1765356.35870361"	"HCD"	"MS2"	"0"	"55.0"	"100.000"	"37.6848"	"10326"	"10326"	"10315"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.3"	""	"65.9"	""	"72.6"	""	"86.5"	""	"108.9"	"117.2"	""	"1019"	"51"	"37.000"	"30.000"	"0.000439687570087272"	"16"	"0"	"2.662E-07"	"1.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPAAAAAAPPGPR"	"[K].aAPAAAAAAPPGPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"709.40906"	"1417.81084"	"1417.81131"	"-0.33"	"-0.00024"	"12/106"	"12"	"106"	"1764886.78649902"	"HCD"	"MS2"	"0"	"56.1"	"100.000"	"37.9222"	"10415"	"10415"	"10404"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"72.2"	""	"61.7"	""	"79.2"	""	"89.8"	""	"113.3"	"120.2"	""	"1014"	"53"	"37.000"	"30.000"	"0.000248317861419802"	"17"	"0"	"9.787E-07"	"1.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPAAAAAAPPGPR"	"[K].aAPAAAAAAPPGPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.9344"	"0.0000"	"1"	"1"	"1"	"709.40912"	"1417.81096"	"1417.81131"	"-0.25"	"-0.00018"	"12/106"	"12"	"106"	"1195806.27679443"	"HCD"	"MS2"	"0"	"50.7"	"100.000"	"37.4097"	"10218"	"10218"	"10199"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.6"	""	"68.4"	""	"76.2"	""	"84.9"	""	"88.9"	"95.8"	""	"1014"	"61"	"37.000"	"30.000"	"4.46691778615063E-05"	"21"	"0"	"1.56E-06"	"1.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPAAAAAAPPGPR"	"[K].aAPAAAAAAPPGPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.9672"	"0.0000"	"1"	"1"	"1"	"709.40997"	"1417.81267"	"1417.81131"	"0.96"	"0.00068"	"12/106"	"12"	"106"	"1075264.37371826"	"HCD"	"MS2"	"0"	"44.9"	"100.000"	"37.6403"	"10304"	"10304"	"10291"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.4"	""	"51.6"	""	"54.1"	""	"79.6"	""	"94.6"	"89.8"	""	"1012"	"61"	"37.000"	"30.000"	"3.9824516958572E-05"	"18"	"0"	"1.184E-07"	"1.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAGVFEPTIVK"	"[K].QAGVFEPTIVk.[V]"	"K11(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"709.41608"	"1417.82488"	"1417.82523"	"-0.25"	"-0.00018"	"6/104"	"6"	"104"	"247732.311950684"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"104.6994"	"36383"	"36383"	"36377"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.7"	""	"9.4"	""	"7.3"	""	"12.8"	""	"9.5"	"9.6"	""	"1004"	"34"	"37.000"	"30.000"	"0.0189541239844559"	"20"	"0.002973"	"0.02891"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAGVFEPTIVK"	"[K].QAGVFEPTIVk.[V]"	"K11(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"709.41656"	"1417.82585"	"1417.82523"	"0.44"	"0.00031"	"6/104"	"6"	"104"	"348101.436340332"	"HCD"	"MS2"	"8.927872"	"10.8"	"100.000"	"104.6688"	"36438"	"36438"	"36429"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.0"	""	"15.2"	""	"13.2"	""	"19.5"	""	"20.3"	"19.0"	""	"1000"	"38"	"36.000"	"30.000"	"0.00779776251413477"	"18"	"0.0003538"	"0.006511"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAELIAEAK"	"[R].dAELIAEAk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"709.41882"	"1417.83037"	"1417.83027"	"0.07"	"0.00005"	"7/76"	"7"	"76"	"290196.264831543"	"HCD"	"MS2"	"26.7768"	"22.5"	"100.000"	"69.0141"	"23027"	"23027"	"22996"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.6"	""	"20.4"	""	"25.9"	""	"39.0"	"0.1"	"50.7"	"48.8"	""	"974"	"45"	"36.000"	"29.000"	"0.00157590110924729"	"24"	"0"	"0.001091"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAELIAEAK"	"[R].dAELIAEAk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"709.41919"	"1417.83110"	"1417.83027"	"0.59"	"0.00042"	"8/76"	"8"	"76"	"334747.433959961"	"HCD"	"MS2"	"50.39658"	"27.6"	"100.000"	"68.8838"	"22988"	"22988"	"22959"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.0"	""	"28.4"	""	"23.7"	""	"53.4"	"0.3"	"58.4"	"65.0"	""	"980"	"51"	"36.000"	"29.000"	"0.000401972256721611"	"28"	"0"	"0.0001701"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLAQMEEER"	"[K].sPLAQMEEER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"709.86017"	"1418.71306"	"1418.71470"	"-1.15"	"-0.00082"	"7/98"	"7"	"98"	"1518204.10784912"	"HCD"	"MS2"	"20.12685"	"80.5"	"100.000"	"55.7715"	"17689"	"17689"	"17665"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.6"	""	"78.5"	""	"101.8"	""	"118.2"	""	"201.1"	"182.0"	""	"623"	"42"	"34.000"	"27.000"	"0.00220017918152913"	"25"	"0"	"7.111E-05"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLAQMEEER"	"[K].sPLAQMEEER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"709.86035"	"1418.71343"	"1418.71470"	"-0.89"	"-0.00063"	"7/98"	"7"	"98"	"1476511.699646"	"HCD"	"MS2"	"25.14989"	"71.3"	"100.000"	"55.9463"	"17746"	"17746"	"17725"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"92.0"	""	"64.2"	""	"84.9"	""	"97.0"	""	"167.7"	"174.1"	""	"622"	"39"	"34.000"	"27.000"	"0.00370476264496513"	"25"	"0"	"0.0001778"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLAQMEEER"	"[K].sPLAQMEEER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"709.86096"	"1418.71465"	"1418.71470"	"-0.03"	"-0.00002"	"13/98"	"13"	"98"	"1618530.53961182"	"HCD"	"MS2"	"33.49969"	"73.4"	"100.000"	"56.0731"	"17812"	"17812"	"17789"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"122.5"	""	"74.2"	""	"87.9"	""	"98.7"	""	"146.4"	"167.6"	""	"652"	"21"	"35.000"	"28.000"	"0.283281099947334"	"18"	"0"	"0.002864"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNMTPEEAER"	"[K].lNMTPEEAER.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.86108"	"1418.71489"	"1418.71470"	"0.14"	"0.00010"	"12/98"	"12"	"98"	"910040.48626709"	"HCD"	"MS2"	"27.44713"	"36.2"	"100.000"	"51.1556"	"15808"	"15808"	"15783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.3"	""	"39.3"	""	"48.1"	""	"69.2"	"0.0"	"71.7"	"67.6"	""	"652"	"14"	"35.000"	"28.000"	"1.4395196583718"	"13"	"0.006685"	"0.07456"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNMTPEEAER"	"[K].lNMTPEEAER.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"709.86163"	"1418.71599"	"1418.71470"	"0.91"	"0.00065"	"7/98"	"7"	"98"	"684032.310180664"	"HCD"	"MS2"	"6.78168"	"41.7"	"100.000"	"51.2183"	"15823"	"15823"	"15794"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.0"	""	"50.3"	""	"57.1"	""	"58.8"	""	"79.5"	"85.1"	""	"674"	"39"	"35.000"	"28.000"	"0.00406097111905296"	"23"	"0.000936"	"0.01253"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGHFAAFEEPK"	"[R].GGHFAAFEEPk.[L]"	"K11(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"473.57993"	"1418.72522"	"1418.72658"	"-0.96"	"-0.00045"	"6/82"	"6"	"82"	"2880882.94140625"	"HCD"	"MS2"	"44.69735"	"107.6"	"100.000"	"43.9354"	"12871"	"12871"	"12853"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"161.0"	""	"218.7"	""	"118.7"	""	"116.5"	"0.4"	"149.8"	"253.7"	""	"736"	"28"	"35.000"	"28.000"	"0.0538081200200072"	"17"	"0.0006732"	"0.009132"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNEAQAIETAR"	"[K].sNEAQAIETAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"709.87518"	"1418.74309"	"1418.74369"	"-0.42"	"-0.00030"	"5/114"	"5"	"114"	"171438.862365723"	"HCD"	"MS2"	"0"	"17.2"	"100.000"	"35.0023"	"9235"	"9235"	"9211"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.3"	""	"22.6"	""	"26.8"	""	"26.7"	"2.8"	"31.7"	"30.0"	""	"857"	"21"	"36.000"	"29.000"	"0.308994554829872"	"16"	"0.003967"	"0.04135"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEVDAQMVR"	"[R].iEEVDAQMVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FY0"	"Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"Q68FY0"	"Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"709.87695"	"1418.74663"	"1418.75108"	"-3.14"	"-0.00223"	"7/84"	"7"	"84"	"390894.944152832"	"HCD"	"MS2"	"25.8444"	"29.7"	"100.000"	"67.0839"	"22240"	"22240"	"22210"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.3"	""	"43.7"	""	"46.1"	""	"41.4"	""	"58.8"	"58.5"	""	"878"	"20"	"36.000"	"29.000"	"0.492566101438562"	"20"	"0.000936"	"0.01171"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEVDAQMVR"	"[R].iEEVDAQMVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FY0"	"Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"Q68FY0"	"Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"709.87854"	"1418.74980"	"1418.75108"	"-0.90"	"-0.00064"	"8/84"	"8"	"84"	"626780.484008789"	"HCD"	"MS2"	"21.26705"	"38.2"	"100.000"	"67.0295"	"22233"	"22233"	"22204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.8"	""	"59.4"	""	"61.3"	""	"50.8"	"0.1"	"76.8"	"68.9"	""	"908"	"55"	"36.000"	"29.000"	"0.00014590018845427"	"27"	"0"	"8.59E-05"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEVDAQMVR"	"[R].iEEVDAQMVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FY0"	"Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"Q68FY0"	"Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"709.87939"	"1418.75151"	"1418.75108"	"0.30"	"0.00022"	"14/84"	"14"	"84"	"263445.304077148"	"HCD"	"MS2"	"0"	"20.7"	"100.000"	"67.3795"	"22360"	"22360"	"22338"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.5"	""	"32.9"	""	"25.8"	""	"29.2"	""	"42.4"	"40.1"	""	"918"	"27"	"36.000"	"29.000"	"0.0990404683801073"	"28"	"0"	"0.001923"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTEEELK"	"[K].vLTEEELk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.6200"	"0.0000"	"1"	"1"	"1"	"709.92847"	"1418.84966"	"1418.85067"	"-0.71"	"-0.00051"	"14/62"	"14"	"62"	"1059113.22174072"	"HCD"	"MS2"	"5.417727"	"81.0"	"100.000"	"70.8337"	"23782"	"23782"	"23764"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"99.1"	""	"99.1"	""	"96.8"	""	"139.6"	""	"170.6"	"170.2"	""	"786"	"50"	"35.000"	"28.000"	"0.000421107086958379"	""	"0"	"0.00145"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTEEELK"	"[K].vLTEEELk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"709.92859"	"1418.84990"	"1418.85067"	"-0.54"	"-0.00038"	"14/62"	"14"	"62"	"972342.874328613"	"HCD"	"MS2"	"5.490455"	"80.1"	"100.000"	"70.9506"	"23816"	"23816"	"23797"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"99.3"	""	"88.7"	""	"101.0"	""	"149.8"	"1.8"	"159.5"	"160.4"	""	"785"	"49"	"35.000"	"28.000"	"0.000450650296437527"	"28"	"0"	"0.001375"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDHFEEAMR"	"[R].rDHFEEAMR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"355.68005"	"1419.69838"	"1419.70005"	"-1.17"	"-0.00042"	"6/88"	"6"	"88"	"4539066.3012085"	"HCD"	"MS2"	"0"	"102.4"	"100.000"	"24.9351"	"5163"	"5163"	"5153"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"133.5"	""	"109.6"	""	"141.3"	""	"163.6"	""	"243.9"	"181.7"	""	"526"	"12"	"34.000"	"27.000"	"1.59571654681777"	"13"	"0.0001301"	"0.004182"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDHFEEAMR"	"[R].rDHFEEAMR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"355.68018"	"1419.69887"	"1419.70005"	"-0.83"	"-0.00029"	"5/88"	"5"	"88"	"5682942.72027588"	"HCD"	"MS2"	"20.58719"	"110.5"	"100.000"	"25.0227"	"5184"	"5184"	"5168"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"144.1"	""	"121.5"	""	"154.4"	""	"182.4"	"2.7"	"248.3"	"195.8"	""	"526"	"11"	"34.000"	"27.000"	"2.12302812955445"	"13"	"0.00447"	"0.04831"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMSAPGTR"	"[K].gASQAGMSAPGTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"0"	"2"	"2"	"0.8525"	"0.0000"	"1"	"1"	"1"	"710.36243"	"1419.71758"	"1419.72118"	"-2.54"	"-0.00180"	"9/132"	"9"	"132"	"1227703.14361572"	"HCD"	"MS2"	"0"	"61.8"	"100.000"	"27.6820"	"6277"	"6277"	"6247"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.7"	""	"58.3"	""	"56.3"	""	"117.7"	"1.4"	"159.8"	"134.4"	""	"648"	"61"	"35.000"	"28.000"	"2.4129315954554E-05"	"25"	"0"	"2.438E-06"	"1.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMSAPGTR"	"[K].gASQAGMSAPGTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"710.36420"	"1419.72112"	"1419.72118"	"-0.04"	"-0.00003"	"11/132"	"11"	"132"	"1309699.21624756"	"HCD"	"MS2"	"0"	"63.2"	"100.000"	"27.7881"	"6305"	"6305"	"6278"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.6"	""	"60.4"	""	"63.8"	""	"108.2"	""	"173.8"	"135.4"	""	"682"	"62"	"35.000"	"28.000"	"2.01258568338599E-05"	"25"	"0"	"5.426E-06"	"0.96"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVYDAHTK"	"[K].qVYDAHTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"473.93750"	"1419.79795"	"1419.79963"	"-1.19"	"-0.00056"	"8/76"	"8"	"76"	"11104375.8601074"	"HCD"	"MS2"	"6.235278"	"472.2"	"100.000"	"28.7582"	"6713"	"6713"	"6696"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"398.6"	""	"392.0"	""	"318.8"	""	"965.1"	""	"1219.2"	"1217.0"	""	"1060"	"16"	"37.000"	"30.000"	"1.27724987720389"	"19"	"0.008437"	"0.1016"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVYDAHTK"	"[K].qVYDAHTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.6087"	"0.0000"	"1"	"1"	"1"	"473.93774"	"1419.79868"	"1419.79963"	"-0.67"	"-0.00032"	"10/76"	"10"	"76"	"12573262.5547485"	"HCD"	"MS2"	"2.344238"	"483.0"	"94.531"	"28.8554"	"6739"	"6739"	"6726"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"402.0"	""	"418.6"	""	"355.3"	""	"897.3"	""	"1284.3"	"1256.9"	""	"1098"	"23"	"37.000"	"30.000"	"0.273257659653436"	"23"	"0.002871"	"0.02706"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIASEPTEK"	"[K].sIASEPTEk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"710.40759"	"1419.80791"	"1419.80953"	"-1.14"	"-0.00081"	"8/78"	"8"	"78"	"3098569.45251465"	"HCD"	"MS2"	"6.807506"	"205.3"	"100.000"	"41.0899"	"11704"	"11704"	"11692"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"211.1"	""	"261.2"	""	"253.5"	""	"350.6"	""	"456.7"	"422.2"	""	"1024"	"48"	"37.000"	"30.000"	"0.000900056890346851"	"26"	"0"	"0.0007005"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDGLDVSK"	"[K].eVDGLDVSk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"710.40771"	"1419.80815"	"1419.80953"	"-0.97"	"-0.00069"	"8/78"	"8"	"78"	"2186536.47015381"	"HCD"	"MS2"	"2.079242"	"156.1"	"100.000"	"65.7733"	"21720"	"21720"	"21702"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"240.8"	""	"169.5"	""	"176.6"	""	"279.0"	"0.8"	"302.8"	"310.4"	""	"1024"	"56"	"37.000"	"30.000"	"0.00014430120608074"	"26"	"0"	"0.0003482"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIASEPTEK"	"[K].sIASEPTEk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"710.40820"	"1419.80913"	"1419.80953"	"-0.28"	"-0.00020"	"14/78"	"14"	"78"	"2324771.12133789"	"HCD"	"MS2"	"0"	"151.0"	"100.000"	"40.9329"	"11649"	"11649"	"11633"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"146.2"	""	"192.7"	""	"175.0"	""	"265.3"	""	"322.8"	"334.6"	""	"1026"	"45"	"37.000"	"30.000"	"0.00150701427145626"	"26"	"0"	"0.0006194"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIASEPTEK"	"[K].sIASEPTEk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"473.94125"	"1419.80921"	"1419.80953"	"-0.23"	"-0.00011"	"10/78"	"10"	"78"	"4200806.66992188"	"HCD"	"MS2"	"29.50849"	"157.7"	"100.000"	"40.7977"	"11595"	"11595"	"11578"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"184.5"	"2.7"	"185.5"	""	"194.3"	""	"279.0"	""	"336.7"	"317.0"	""	"1026"	"30"	"37.000"	"30.000"	"0.0537176945150111"	"21"	"0.0001301"	"0.004056"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTEDEILK"	"[R].nTEDEILk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O08837"	"Cell division cycle 5-like protein OS=Rattus norvegicus OX=10116 GN=Cdc5l PE=1 SV=2"	"O08837"	"Cell division cycle 5-like protein OS=Rattus norvegicus OX=10116 GN=Cdc5l PE=1 SV=2"	"0"	"2"	"2"	"0.4878"	"0.0000"	"1"	"1"	"1"	"710.40826"	"1419.80925"	"1419.80953"	"-0.20"	"-0.00014"	"7/76"	"7"	"76"	"806262.858703613"	"HCD"	"MS2"	"0"	"77.1"	"100.000"	"55.1152"	"17407"	"17407"	"17386"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"110.1"	""	"92.0"	""	"86.1"	""	"139.4"	""	"161.1"	"148.7"	""	"1026"	"41"	"37.000"	"30.000"	"0.00430642973084451"	""	"0"	"0.002847"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIASEPTEK"	"[K].sIASEPTEk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"473.94128"	"1419.80930"	"1419.80953"	"-0.16"	"-0.00008"	"10/78"	"10"	"78"	"4266222.12872314"	"HCD"	"MS2"	"36.89799"	"163.0"	"100.000"	"40.9889"	"11663"	"11663"	"11644"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"167.6"	""	"206.2"	""	"196.9"	""	"301.5"	"2.5"	"332.9"	"341.1"	""	"1026"	"31"	"37.000"	"30.000"	"0.0435629583693629"	"23"	"0.0001301"	"0.004154"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTEDEILK"	"[R].nTEDEILk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O08837"	"Cell division cycle 5-like protein OS=Rattus norvegicus OX=10116 GN=Cdc5l PE=1 SV=2"	"O08837"	"Cell division cycle 5-like protein OS=Rattus norvegicus OX=10116 GN=Cdc5l PE=1 SV=2"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"710.40839"	"1419.80950"	"1419.80953"	"-0.02"	"-0.00002"	"14/76"	"14"	"76"	"719591.667358398"	"HCD"	"MS2"	"0"	"69.9"	"100.000"	"54.8716"	"17322"	"17322"	"17300"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.1"	""	"72.9"	""	"80.5"	""	"134.8"	""	"157.1"	"132.3"	""	"1030"	"45"	"37.000"	"30.000"	"0.00178158779580453"	""	"0"	"0.002091"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDGLDVSK"	"[K].eVDGLDVSk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"710.40863"	"1419.80998"	"1419.80953"	"0.32"	"0.00023"	"8/78"	"8"	"78"	"2448358.25018311"	"HCD"	"MS2"	"8.709247"	"185.4"	"100.000"	"65.8926"	"21754"	"21754"	"21737"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"274.7"	""	"199.7"	""	"215.1"	""	"335.1"	""	"377.8"	"359.0"	""	"1029"	"60"	"37.000"	"30.000"	"4.74662999271125E-05"	"28"	"0"	"0.0002472"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDGLDVSK"	"[K].eVDGLDVSk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"710.40869"	"1419.81011"	"1419.80953"	"0.41"	"0.00029"	"14/78"	"14"	"78"	"726648.089111328"	"HCD"	"MS2"	"0"	"60.5"	"100.000"	"66.0914"	"21850"	"21850"	"21828"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"83.3"	""	"63.6"	""	"70.7"	""	"118.7"	"0.1"	"118.5"	"118.7"	""	"1028"	"49"	"37.000"	"30.000"	"0.000622247440644948"	"24"	"0"	"0.0001444"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIASEPTEK"	"[K].sIASEPTEk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"710.40906"	"1419.81084"	"1419.80953"	"0.92"	"0.00065"	"8/78"	"8"	"78"	"1766178.87005615"	"HCD"	"MS2"	"16.39521"	"128.5"	"100.000"	"40.6412"	"11532"	"11532"	"11506"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"151.1"	""	"160.3"	""	"155.8"	""	"233.7"	"0.5"	"263.8"	"254.7"	""	"1023"	"44"	"37.000"	"30.000"	"0.00184861144740162"	"25"	"0"	"0.0005126"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIASEPTEK"	"[K].sIASEPTEk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"710.40961"	"1419.81194"	"1419.80953"	"1.69"	"0.00120"	"8/78"	"8"	"78"	"1065436.14385986"	"HCD"	"MS2"	"0"	"78.2"	"100.000"	"40.8072"	"11589"	"11589"	"11573"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.0"	""	"106.9"	""	"93.9"	""	"133.1"	"1.6"	"162.9"	"153.7"	""	"989"	"53"	"36.000"	"29.000"	"0.000231295027366519"	"26"	"0"	"0.000267"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTMNSYEMR"	"[R].sGTMNSYEmR.[K]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"710.82263"	"1420.63799"	"1420.63982"	"-1.29"	"-0.00091"	"8/96"	"8"	"96"	"560232.435180664"	"HCD"	"MS2"	"0"	"32.0"	"100.000"	"29.5764"	"7033"	"7033"	"7007"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.0"	""	"49.5"	""	"46.5"	""	"33.5"	""	"60.3"	"63.3"	""	"195"	"38"	"29.000"	"22.000"	"0.0016557875611502"	"15"	"0"	"0.001028"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTMNSYEMR"	"[R].sGTMNSYEmR.[K]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"710.82275"	"1420.63823"	"1420.63982"	"-1.12"	"-0.00079"	"6/96"	"6"	"96"	"270551.632446289"	"HCD"	"MS2"	"0"	"21.0"	"100.000"	"32.5431"	"8240"	"8240"	"8211"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.9"	""	"27.6"	""	"33.5"	""	"28.1"	""	"34.3"	"35.3"	""	"195"	"14"	"29.000"	"22.000"	"0.422673106427841"	"19"	"0.007339"	"0.08445"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTMNSYEMR"	"[R].sGTmNSYEMR.[K]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.2941"	"0.0000"	"1"	"1"	"1"	"710.82281"	"1420.63835"	"1420.63982"	"-1.03"	"-0.00073"	"10/96"	"10"	"96"	"207042.164428711"	"HCD"	"MS2"	"0"	"15.0"	"100.000"	"32.2263"	"8111"	"8111"	"8084"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.6"	""	"25.1"	""	"23.0"	""	"15.4"	"1.1"	"22.4"	"27.3"	""	"195"	"17"	"29.000"	"22.000"	"0.175389914225057"	""	"0.009594"	"0.1255"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTMNSYEMR"	"[R].sGTmNSYEMR.[K]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"710.82281"	"1420.63835"	"1420.63982"	"-1.03"	"-0.00073"	"8/96"	"8"	"96"	"782249.746582031"	"HCD"	"MS2"	"0"	"40.4"	"100.000"	"28.4237"	"6564"	"6564"	"6537"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.4"	""	"63.9"	""	"61.2"	""	"47.7"	""	"76.7"	"67.2"	""	"195"	"33"	"29.000"	"22.000"	"0.00504666661151804"	""	"0.001211"	"0.01486"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTMNSYEMR"	"[R].sGTMNSYEmR.[K]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"710.82288"	"1420.63848"	"1420.63982"	"-0.94"	"-0.00067"	"6/96"	"6"	"96"	"286316.43170166"	"HCD"	"MS2"	"0"	"19.8"	"100.000"	"33.8798"	"8789"	"8789"	"8763"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.6"	""	"27.6"	""	"25.2"	""	"20.1"	""	"40.7"	"43.2"	""	"195"	"14"	"29.000"	"22.000"	"0.381948330180089"	"22"	"0.007476"	"0.08913"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTMNSYEMR"	"[R].sGTmNSYEMR.[K]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"710.82294"	"1420.63860"	"1420.63982"	"-0.86"	"-0.00061"	"8/96"	"8"	"96"	"780990.551025391"	"HCD"	"MS2"	"0"	"41.7"	"100.000"	"28.3432"	"6545"	"6545"	"6518"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.4"	""	"61.6"	""	"74.7"	""	"43.5"	""	"74.3"	"74.2"	""	"195"	"40"	"29.000"	"22.000"	"0.000944070909854718"	""	"0"	"0.002615"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTMNSYEMR"	"[R].sGTMNSYEmR.[K]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"710.82306"	"1420.63884"	"1420.63982"	"-0.69"	"-0.00049"	"7/96"	"7"	"96"	"306584.434936523"	"HCD"	"MS2"	"0"	"17.4"	"100.000"	"29.8011"	"7136"	"7136"	"7115"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.4"	""	"20.1"	""	"30.2"	""	"14.3"	""	"32.6"	"32.6"	""	"198"	"36"	"29.000"	"22.000"	"0.00225753865128041"	"15"	"0.0001301"	"0.004428"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTMNSYEMR"	"[R].sGTMNSYEmR.[K]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"710.82324"	"1420.63921"	"1420.63982"	"-0.43"	"-0.00030"	"6/96"	"6"	"96"	"280862.607421875"	"HCD"	"MS2"	"0"	"20.8"	"100.000"	"32.4530"	"8210"	"8210"	"8179"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.1"	""	"32.5"	""	"28.4"	""	"24.6"	"1.1"	"35.5"	"35.4"	""	"198"	"16"	"29.000"	"22.000"	"0.265849100120192"	"14"	"0.006769"	"0.07891"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTMNSYEMR"	"[R].sGTMNSYEmR.[K]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"710.82379"	"1420.64031"	"1420.63982"	"0.35"	"0.00025"	"7/96"	"7"	"96"	"387233.977905273"	"HCD"	"MS2"	"0"	"25.1"	"100.000"	"29.4772"	"7005"	"7005"	"6980"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.2"	""	"29.4"	""	"38.5"	""	"30.7"	""	"46.9"	"49.3"	""	"198"	"30"	"29.000"	"22.000"	"0.0106324951821783"	"21"	"0.000936"	"0.01189"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTMNSYEMR"	"[R].sGTMNSYEmR.[K]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"710.82397"	"1420.64067"	"1420.63982"	"0.60"	"0.00043"	"6/96"	"6"	"96"	"274171.111083984"	"HCD"	"MS2"	"0"	"17.4"	"100.000"	"33.2162"	"8521"	"8521"	"8491"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.2"	""	"31.2"	""	"23.6"	""	"19.8"	"1.0"	"31.0"	"29.5"	""	"200"	"15"	"30.000"	"23.000"	"0.306196343369068"	"14"	"0.006685"	"0.07503"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTMNSYEMR"	"[R].sGTMNSYEmR.[K]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"710.82422"	"1420.64116"	"1420.63982"	"0.95"	"0.00067"	"7/96"	"7"	"96"	"274975.098083496"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"33.5719"	"8664"	"8664"	"8640"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.6"	""	"21.8"	""	"25.5"	""	"20.1"	""	"27.9"	"34.5"	""	"200"	"22"	"30.000"	"23.000"	"0.0584790084144481"	"22"	"0.000936"	"0.01292"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTMNSYEMR"	"[R].sGTMNSYEmR.[K]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"710.82446"	"1420.64165"	"1420.63982"	"1.29"	"0.00092"	"7/96"	"7"	"96"	"228483.871032715"	"HCD"	"MS2"	"0"	"17.0"	"100.000"	"33.5902"	"8665"	"8665"	"8645"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.5"	""	"29.1"	""	"22.7"	""	"18.6"	""	"28.4"	"32.9"	""	"198"	"17"	"29.000"	"22.000"	"0.205889972023266"	"18"	"0.00379"	"0.03886"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDSLGWEER"	"[R].sLDSLGWEER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q923S8"	"Pantothenate kinase 4 OS=Rattus norvegicus OX=10116 GN=Pank4 PE=1 SV=1"	"Q923S8"	"Pantothenate kinase 4 OS=Rattus norvegicus OX=10116 GN=Pank4 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"710.86682"	"1420.72637"	"1420.72697"	"-0.43"	"-0.00030"	"7/88"	"7"	"88"	"257294.214172363"	"HCD"	"MS2"	"24.42789"	"17.4"	"100.000"	"78.7756"	"26991"	"26991"	"26976"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.6"	""	"20.2"	""	"24.4"	""	"28.5"	"1.2"	"31.4"	"29.8"	""	"695"	"25"	"35.000"	"28.000"	"0.116400490107345"	"19"	"0"	"0.001515"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLYPVADDR"	"[K].aDGLYPVADDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RY07"	"Acidic mammalian chitinase OS=Rattus norvegicus OX=10116 GN=Chia PE=2 SV=1"	"Q6RY07"	"Acidic mammalian chitinase OS=Rattus norvegicus OX=10116 GN=Chia PE=2 SV=1"	"0"	"2"	"2"	"0.9455"	"0.0000"	"1"	"1"	"1"	"710.86707"	"1420.72685"	"1420.72697"	"-0.08"	"-0.00006"	"9/96"	"9"	"96"	"749245.285705566"	"HCD"	"MS2"	"13.20244"	"48.0"	"100.000"	"58.5170"	"18809"	"18809"	"18783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.8"	""	"60.2"	""	"53.7"	""	"68.2"	"0.5"	"100.2"	"101.6"	""	"697"	"55"	"35.000"	"28.000"	"9.84470671258123E-05"	"19"	"0"	"0.0001199"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDSLGWEER"	"[R].sLDSLGWEER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q923S8"	"Pantothenate kinase 4 OS=Rattus norvegicus OX=10116 GN=Pank4 PE=1 SV=1"	"Q923S8"	"Pantothenate kinase 4 OS=Rattus norvegicus OX=10116 GN=Pank4 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"710.86731"	"1420.72734"	"1420.72697"	"0.26"	"0.00018"	"6/88"	"6"	"88"	"254042.131896973"	"HCD"	"MS2"	"36.81305"	"16.6"	"100.000"	"78.7874"	"26991"	"26991"	"26972"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.0"	""	"24.5"	""	"22.6"	""	"28.1"	""	"30.4"	"27.5"	""	"697"	"36"	"35.000"	"28.000"	"0.00889616403977445"	"18"	"0"	"0.0004773"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLYPVADDR"	"[K].aDGLYPVADDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RY07"	"Acidic mammalian chitinase OS=Rattus norvegicus OX=10116 GN=Chia PE=2 SV=1"	"Q6RY07"	"Acidic mammalian chitinase OS=Rattus norvegicus OX=10116 GN=Chia PE=2 SV=1"	"0"	"2"	"2"	"0.9556"	"0.0000"	"1"	"1"	"1"	"710.86761"	"1420.72795"	"1420.72697"	"0.69"	"0.00049"	"9/96"	"9"	"96"	"549281.173828125"	"HCD"	"MS2"	"0"	"35.0"	"100.000"	"58.6893"	"18864"	"18864"	"18840"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.7"	""	"43.1"	""	"43.5"	""	"53.8"	"0.4"	"64.0"	"73.1"	""	"696"	"45"	"35.000"	"28.000"	"0.00113652565595973"	"18"	"0"	"0.0008395"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVTGDNINTAR"	"[R].mVTGDNINTAR.[A]"	"N-Term(TMT6plex)"	"1"	"3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11506; Q64568; P11505"	"Plasma membrane calcium-transporting ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2b2 PE=1 SV=2; Plasma membrane calcium-transporting ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2b3 PE=1 SV=2; Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"710.87329"	"1420.73931"	"1420.74158"	"-1.60"	"-0.00114"	"9/102"	"9"	"102"	"1017857.53814697"	"HCD"	"MS2"	"0"	"61.8"	"100.000"	"42.5898"	"12325"	"12325"	"12298"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.1"	""	"80.9"	""	"84.6"	""	"90.0"	"1.1"	"123.0"	"131.8"	""	"800"	"48"	"36.000"	"29.000"	"0.000656235909279816"	"24"	"0"	"1.938E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVTGDNINTAR"	"[R].mVTGDNINTAR.[A]"	"N-Term(TMT6plex)"	"1"	"3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11506; Q64568; P11505"	"Plasma membrane calcium-transporting ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2b2 PE=1 SV=2; Plasma membrane calcium-transporting ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2b3 PE=1 SV=2; Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"710.87433"	"1420.74138"	"1420.74158"	"-0.14"	"-0.00010"	"8/102"	"8"	"102"	"1045965.24902344"	"HCD"	"MS2"	"0"	"68.5"	"100.000"	"42.7143"	"12365"	"12365"	"12338"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"89.6"	""	"81.4"	""	"93.3"	""	"102.4"	"0.5"	"146.3"	"137.0"	""	"801"	"57"	"36.000"	"29.000"	"7.38928675381378E-05"	"28"	"0"	"5.857E-06"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEYEAAATR"	"[R].lAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.8364"	"0.0000"	"1"	"1"	"1"	"474.25873"	"1420.76163"	"1420.76336"	"-1.22"	"-0.00058"	"14/92"	"14"	"92"	"4701551.53594971"	"HCD"	"MS2"	"28.87693"	"65.4"	"100.000"	"53.2046"	"16633"	"16633"	"16611"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.6"	""	"80.8"	""	"89.3"	""	"107.3"	""	"136.5"	"135.7"	""	"916"	"55"	"36.000"	"29.000"	"0.00013863263500704"	"25"	"0"	"0.0001643"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEYEAAATR"	"[R].lAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.7959"	"0.0000"	"1"	"1"	"1"	"474.25879"	"1420.76181"	"1420.76336"	"-1.09"	"-0.00052"	"14/92"	"14"	"92"	"1788082.04418945"	"HCD"	"MS2"	"10.11082"	"34.8"	"100.000"	"53.2753"	"16673"	"16673"	"16653"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.0"	""	"42.0"	""	"45.2"	""	"56.2"	"0.5"	"71.1"	"73.1"	""	"916"	"49"	"36.000"	"29.000"	"0.000530720029119048"	"25"	"0"	"0.0002882"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEYEAAATR"	"[R].lAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.7925"	"0.0000"	"1"	"1"	"1"	"474.25909"	"1420.76273"	"1420.76336"	"-0.44"	"-0.00021"	"14/92"	"14"	"92"	"2316011.68951416"	"HCD"	"MS2"	"11.40483"	"35.5"	"100.000"	"53.5197"	"16762"	"16762"	"16738"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.6"	""	"36.8"	""	"44.5"	""	"69.5"	"0.1"	"68.2"	"68.0"	""	"926"	"53"	"36.000"	"29.000"	"0.000235277821905539"	"27"	"0"	"0.0002987"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEYEAAATR"	"[R].lAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"710.88501"	"1420.76274"	"1420.76336"	"-0.43"	"-0.00031"	"8/92"	"8"	"92"	"757435.510314941"	"HCD"	"MS2"	"24.81553"	"42.9"	"100.000"	"52.7042"	"16440"	"16440"	"16422"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.2"	""	"61.7"	""	"48.9"	""	"72.3"	"0.0"	"85.7"	"79.1"	""	"920"	"41"	"36.000"	"29.000"	"0.00396057126004916"	"26"	"0"	"0.0001612"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEYEAAATR"	"[R].lAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"474.25912"	"1420.76282"	"1420.76336"	"-0.38"	"-0.00018"	"14/92"	"14"	"92"	"5839594.70257568"	"HCD"	"MS2"	"13.16604"	"65.2"	"100.000"	"52.9667"	"16547"	"16547"	"16529"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.9"	""	"73.0"	""	"79.9"	""	"124.9"	""	"124.4"	"133.3"	""	"918"	"60"	"36.000"	"29.000"	"4.66458150027649E-05"	"28"	"0"	"0.0002322"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEYEAAATR"	"[R].lAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"710.88507"	"1420.76286"	"1420.76336"	"-0.35"	"-0.00025"	"10/92"	"10"	"92"	"27174475.6405029"	"HCD"	"MS2"	"0"	"359.1"	"36.412"	"53.3059"	"16675"	"16675"	"16658"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"495.8"	""	"417.6"	""	"484.7"	""	"608.0"	""	"682.0"	"721.2"	""	"918"	"45"	"36.000"	"29.000"	"0.00137661559621533"	"27"	"0"	"3.643E-05"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEYEAAATR"	"[R].lAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"710.88513"	"1420.76299"	"1420.76336"	"-0.26"	"-0.00019"	"9/92"	"9"	"92"	"4390240.87268066"	"HCD"	"MS2"	"0"	"171.1"	"100.000"	"53.3028"	"16685"	"16685"	"16669"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"230.4"	""	"205.1"	""	"224.9"	""	"291.2"	"0.2"	"325.8"	"344.9"	""	"918"	"45"	"36.000"	"29.000"	"0.0013452799995699"	"28"	"0"	"2.669E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEYEAAATR"	"[R].lAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"710.88519"	"1420.76311"	"1420.76336"	"-0.18"	"-0.00013"	"9/92"	"9"	"92"	"472020.365783691"	"HCD"	"MS2"	"12.25471"	"33.6"	"100.000"	"53.6275"	"16817"	"16817"	"16796"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.6"	""	"38.2"	""	"44.2"	""	"54.3"	"0.4"	"66.7"	"70.2"	""	"918"	"33"	"36.000"	"29.000"	"0.0213212511327242"	"22"	"0"	"0.0005653"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEYEAAATR"	"[R].lAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"710.88525"	"1420.76323"	"1420.76336"	"-0.09"	"-0.00006"	"10/92"	"10"	"92"	"30166267.1020508"	"HCD"	"MS2"	"0"	"509.6"	"49.011"	"53.0014"	"16562"	"16562"	"16545"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"699.8"	""	"630.0"	""	"673.2"	""	"860.3"	""	"958.1"	"1014.5"	""	"918"	"46"	"36.000"	"29.000"	"0.00121007610609385"	"28"	"0"	"1.705E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEYEAAATR"	"[R].lAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"710.88538"	"1420.76348"	"1420.76336"	"0.08"	"0.00006"	"6/92"	"6"	"92"	"438058.39263916"	"HCD"	"MS2"	"10.48926"	"30.5"	"100.000"	"53.9499"	"16938"	"16938"	"16912"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.0"	""	"36.4"	""	"35.4"	""	"55.7"	"1.7"	"64.8"	"60.1"	""	"961"	"24"	"36.000"	"29.000"	"0.212174599953267"	"25"	"0.002937"	"0.02803"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEYEAAATR"	"[R].lAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"710.88538"	"1420.76348"	"1420.76336"	"0.08"	"0.00006"	"10/92"	"10"	"92"	"2854044.24304199"	"HCD"	"MS2"	"0"	"117.7"	"100.000"	"53.6164"	"16802"	"16802"	"16785"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"155.8"	""	"139.2"	""	"159.1"	""	"207.2"	""	"211.6"	"243.7"	""	"961"	"45"	"36.000"	"29.000"	"0.00139538288547017"	"28"	"0"	"2.474E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEYEAAATR"	"[R].lAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"710.88544"	"1420.76360"	"1420.76336"	"0.17"	"0.00012"	"10/92"	"10"	"92"	"1392698.4387207"	"HCD"	"MS2"	"17.14321"	"69.1"	"100.000"	"53.0203"	"16558"	"16558"	"16533"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.3"	""	"80.8"	""	"91.2"	""	"123.8"	"0.9"	"133.9"	"137.8"	""	"951"	"45"	"36.000"	"29.000"	"0.00151757625010041"	"27"	"0"	"5.625E-06"	"0.957"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSAEINEIIR"	"[K].mSAEINEIIR.[V]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"710.88593"	"1420.76457"	"1420.76673"	"-1.52"	"-0.00108"	"9/90"	"9"	"90"	"870051.712219238"	"HCD"	"MS2"	"0"	"41.9"	"100.000"	"63.5774"	"20831"	"20831"	"20811"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.8"	""	"43.9"	""	"45.4"	""	"89.4"	"0.6"	"82.5"	"86.7"	""	"947"	"32"	"36.000"	"29.000"	"0.0276898104842412"	"15"	"0.0023"	"0.02376"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSAEINEIIR"	"[K].mSAEINEIIR.[V]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"710.88647"	"1420.76567"	"1420.76673"	"-0.75"	"-0.00053"	"9/90"	"9"	"90"	"862547.539978027"	"HCD"	"MS2"	"0"	"44.2"	"100.000"	"63.6939"	"20864"	"20864"	"20843"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.7"	""	"50.4"	""	"41.3"	""	"100.9"	"0.1"	"82.7"	"93.9"	""	"947"	"36"	"36.000"	"29.000"	"0.0112026297675951"	"15"	"0.0006732"	"0.008713"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAGHPLAQNER"	"[K].vAGHPLAQNER.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"710.89569"	"1420.78411"	"1420.78583"	"-1.21"	"-0.00086"	"8/86"	"8"	"86"	"220013.065124512"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"23.3743"	"4542"	"4542"	"4513"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.4"	""	"15.2"	""	"13.8"	""	"17.7"	""	"17.8"	"14.7"	""	"1018"	"18"	"37.000"	"30.000"	"0.74082867201622"	"21"	"0.002973"	"0.03032"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAGHPLAQNER"	"[K].vAGHPLAQNER.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"710.89581"	"1420.78435"	"1420.78583"	"-1.04"	"-0.00074"	"4/86"	"4"	"86"	"163324.614013672"	"HCD"	"MS2"	"100"	"9.2"	"100.000"	"23.4386"	"4551"	"4551"	"4527"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.9"	""	"15.4"	""	"15.2"	""	"14.6"	""	"13.5"	"15.4"	""	"1018"	"6"	"37.000"	"30.000"	"13.8266758783909"	"13"	"0.0023"	"0.02364"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDDLEEK"	"[K].tIDDLEEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"710.89960"	"1420.79192"	"1420.79355"	"-1.15"	"-0.00081"	"14/68"	"14"	"68"	"3080307.29467773"	"HCD"	"MS2"	"1.804551"	"255.9"	"100.000"	"64.8037"	"21327"	"21327"	"21310"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"392.1"	""	"261.0"	""	"290.4"	""	"448.4"	""	"497.1"	"541.8"	""	"1042"	"42"	"37.000"	"30.000"	"0.00362942413851711"	"28"	"0.0002479"	"0.005072"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDDLEEK"	"[K].tIDDLEEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.7045"	"0.0000"	"1"	"1"	"1"	"710.89996"	"1420.79265"	"1420.79355"	"-0.63"	"-0.00045"	"14/68"	"14"	"68"	"9008934.37353516"	"HCD"	"MS2"	"0.8775117"	"709.1"	"100.000"	"64.6549"	"21256"	"21256"	"21239"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1062.7"	""	"758.0"	""	"820.2"	""	"1353.2"	""	"1367.5"	"1368.7"	""	"1040"	"44"	"37.000"	"30.000"	"0.00224907192138204"	"28"	"0.0003538"	"0.006532"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDDLEEK"	"[K].tIDDLEEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"710.90002"	"1420.79277"	"1420.79355"	"-0.54"	"-0.00039"	"12/68"	"12"	"68"	"1300883.83050537"	"HCD"	"MS2"	"37.2518"	"110.1"	"100.000"	"64.2409"	"21101"	"21101"	"21081"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"167.2"	""	"126.9"	""	"118.8"	""	"236.2"	"0.3"	"195.5"	"198.0"	""	"1040"	"30"	"37.000"	"30.000"	"0.0580768888845891"	"29"	"0.0003538"	"0.006309"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDDLEEK"	"[K].tIDDLEEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"710.90002"	"1420.79277"	"1420.79355"	"-0.54"	"-0.00039"	"14/68"	"14"	"68"	"8770390.38171387"	"HCD"	"MS2"	"0.8558639"	"665.0"	"100.000"	"64.5222"	"21216"	"21216"	"21199"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1014.4"	""	"698.7"	""	"754.1"	""	"1298.5"	"0.3"	"1245.2"	"1293.1"	""	"1040"	"43"	"37.000"	"30.000"	"0.00232810918171708"	"29"	"0.0003538"	"0.006878"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDDLEEK"	"[K].tIDDLEEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.5116"	"0.0000"	"1"	"1"	"1"	"710.90039"	"1420.79350"	"1420.79355"	"-0.03"	"-0.00002"	"14/68"	"14"	"68"	"1879765.67626953"	"HCD"	"MS2"	"1.873858"	"169.6"	"100.000"	"64.9425"	"21368"	"21368"	"21351"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"263.2"	"2.9"	"168.7"	""	"213.3"	""	"298.1"	""	"314.3"	"348.4"	""	"1048"	"43"	"37.000"	"30.000"	"0.00240066348638415"	""	"0"	"0.003337"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDDLEEK"	"[K].tIDDLEEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"710.90045"	"1420.79363"	"1420.79355"	"0.06"	"0.00004"	"7/68"	"7"	"68"	"1769197.39526367"	"HCD"	"MS2"	"13.64312"	"148.8"	"100.000"	"64.3619"	"21136"	"21136"	"21115"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"223.6"	""	"162.9"	""	"169.0"	""	"297.8"	"0.5"	"273.9"	"282.7"	""	"1048"	"39"	"37.000"	"30.000"	"0.00718342045470383"	"25"	"0.0001301"	"0.00443"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTEDEVEK"	"[R].lTEDEVEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16409"	"Myosin light chain 3 OS=Rattus norvegicus OX=10116 GN=Myl3 PE=1 SV=2"	"P16409"	"Myosin light chain 3 OS=Rattus norvegicus OX=10116 GN=Myl3 PE=1 SV=2"	"0"	"2"	"2"	"0.3103"	"0.0000"	"1"	"1"	"1"	"710.90057"	"1420.79387"	"1420.79355"	"0.23"	"0.00016"	"12/66"	"12"	"66"	"490432.550842285"	"HCD"	"MS2"	"0"	"47.2"	"100.000"	"54.0322"	"16983"	"16983"	"16955"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.1"	""	"31.8"	"2.0"	"37.7"	""	"47.7"	"1.9"	"48.2"	"237.7"	""	"1069"	"29"	"37.000"	"30.000"	"0.0682256543309664"	""	"0.000936"	"0.01252"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTEDEVEK"	"[R].lTEDEVEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16409"	"Myosin light chain 3 OS=Rattus norvegicus OX=10116 GN=Myl3 PE=1 SV=2"	"P16409"	"Myosin light chain 3 OS=Rattus norvegicus OX=10116 GN=Myl3 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"710.90277"	"1420.79827"	"1420.79355"	"3.32"	"0.00236"	"14/66"	"14"	"66"	"476717.85748291"	"HCD"	"MS2"	"25.38905"	"44.4"	"100.000"	"54.3066"	"17084"	"17084"	"17056"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.8"	""	"26.7"	""	"36.6"	""	"51.4"	"2.3"	"43.7"	"221.9"	""	"1013"	"30"	"37.000"	"30.000"	"0.0529150791035335"	"26"	"0.0002479"	"0.005977"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGTAGSDEK"	"[K].vVGTAGSDEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97584"	"Prostaglandin reductase 1 OS=Rattus norvegicus OX=10116 GN=Ptgr1 PE=2 SV=3"	"P97584"	"Prostaglandin reductase 1 OS=Rattus norvegicus OX=10116 GN=Ptgr1 PE=2 SV=3"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"710.90521"	"1420.80315"	"1420.80478"	"-1.15"	"-0.00082"	"9/82"	"9"	"82"	"1664125.91650391"	"HCD"	"MS2"	"16.08452"	"132.5"	"100.000"	"38.5840"	"10684"	"10684"	"10661"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"174.8"	""	"189.1"	""	"193.8"	""	"203.2"	""	"236.9"	"261.6"	""	"971"	"37"	"36.000"	"29.000"	"0.0107198629788067"	"24"	"0"	"8.619E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGTAGSDEK"	"[K].vVGTAGSDEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97584"	"Prostaglandin reductase 1 OS=Rattus norvegicus OX=10116 GN=Ptgr1 PE=2 SV=3"	"P97584"	"Prostaglandin reductase 1 OS=Rattus norvegicus OX=10116 GN=Ptgr1 PE=2 SV=3"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"710.90527"	"1420.80327"	"1420.80478"	"-1.06"	"-0.00075"	"8/82"	"8"	"82"	"1186687.28942871"	"HCD"	"MS2"	"16.84792"	"101.5"	"100.000"	"38.5495"	"10670"	"10670"	"10647"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"138.0"	""	"143.3"	""	"141.3"	""	"145.0"	""	"189.2"	"209.2"	""	"971"	"28"	"36.000"	"29.000"	"0.0783771079339259"	"19"	"0"	"0.001291"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQTSDLEK"	"[K].aAQTSDLEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.5741"	"0.0000"	"1"	"1"	"1"	"474.27271"	"1420.80356"	"1420.80478"	"-0.86"	"-0.00041"	"7/84"	"7"	"84"	"4149227.38598633"	"HCD"	"MS2"	"16.84903"	"174.8"	"100.000"	"39.8571"	"11212"	"11212"	"11188"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"297.2"	""	"204.9"	""	"216.8"	""	"286.5"	""	"318.5"	"333.5"	""	"971"	"54"	"36.000"	"29.000"	"0.000202856643006935"	""	"0"	"0.0008433"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGTAGSDEK"	"[K].vVGTAGSDEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97584"	"Prostaglandin reductase 1 OS=Rattus norvegicus OX=10116 GN=Ptgr1 PE=2 SV=3"	"P97584"	"Prostaglandin reductase 1 OS=Rattus norvegicus OX=10116 GN=Ptgr1 PE=2 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"710.90558"	"1420.80388"	"1420.80478"	"-0.63"	"-0.00045"	"8/82"	"8"	"82"	"856974.973876953"	"HCD"	"MS2"	"5.672126"	"66.0"	"100.000"	"38.6685"	"10727"	"10727"	"10704"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"83.3"	""	"92.1"	""	"99.2"	""	"104.7"	"0.3"	"113.1"	"132.8"	""	"972"	"36"	"36.000"	"29.000"	"0.0114455395197346"	"26"	"0"	"0.001015"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQTSDLEK"	"[K].aAQTSDLEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"710.90564"	"1420.80400"	"1420.80478"	"-0.55"	"-0.00039"	"8/84"	"8"	"84"	"2908465.28338623"	"HCD"	"MS2"	"0"	"236.4"	"100.000"	"40.1937"	"11340"	"11340"	"11320"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"406.8"	""	"267.5"	""	"287.6"	""	"379.8"	"1.5"	"434.9"	"461.9"	""	"971"	"60"	"36.000"	"29.000"	"5.16641435347906E-05"	""	"0"	"0.0003256"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQTSDLEK"	"[K].aAQTSDLEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.4750"	"0.0000"	"1"	"1"	"1"	"474.27298"	"1420.80439"	"1420.80478"	"-0.28"	"-0.00013"	"7/84"	"7"	"84"	"4011203.60168457"	"HCD"	"MS2"	"11.94259"	"162.8"	"100.000"	"40.0854"	"11296"	"11296"	"11273"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"259.3"	""	"205.4"	""	"223.5"	""	"251.6"	""	"300.1"	"305.1"	""	"970"	"40"	"36.000"	"29.000"	"0.00513738056710985"	""	"0.0003538"	"0.006431"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQTSDLEK"	"[K].aAQTSDLEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.6735"	"0.0000"	"1"	"1"	"1"	"710.90607"	"1420.80486"	"1420.80478"	"0.05"	"0.00004"	"14/84"	"14"	"84"	"3104640.63446045"	"HCD"	"MS2"	"0"	"252.9"	"100.000"	"39.6961"	"11146"	"11146"	"11126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"499.7"	""	"304.1"	""	"295.5"	""	"419.6"	""	"459.2"	"420.3"	""	"973"	"49"	"36.000"	"29.000"	"0.000612467212837862"	""	"0"	"0.0005365"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGTAGSDEK"	"[K].vVGTAGSDEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97584"	"Prostaglandin reductase 1 OS=Rattus norvegicus OX=10116 GN=Ptgr1 PE=2 SV=3"	"P97584"	"Prostaglandin reductase 1 OS=Rattus norvegicus OX=10116 GN=Ptgr1 PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"710.90613"	"1420.80498"	"1420.80478"	"0.14"	"0.00010"	"5/82"	"5"	"82"	"681684.655883789"	"HCD"	"MS2"	"10.49246"	"54.3"	"100.000"	"38.9015"	"10813"	"10813"	"10789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.0"	""	"75.0"	""	"75.2"	""	"81.0"	""	"103.3"	"106.5"	""	"973"	"27"	"36.000"	"29.000"	"0.0875150700210154"	"14"	"0.0006732"	"0.009174"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQTSDLEK"	"[K].aAQTSDLEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.7414"	"0.0000"	"1"	"1"	"1"	"710.90631"	"1420.80535"	"1420.80478"	"0.40"	"0.00028"	"8/84"	"8"	"84"	"2741551.39727783"	"HCD"	"MS2"	"0"	"216.9"	"100.000"	"39.9928"	"11267"	"11267"	"11252"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"377.1"	""	"230.2"	""	"275.2"	""	"350.7"	""	"408.1"	"415.3"	""	"976"	"58"	"36.000"	"29.000"	"8.34487473764059E-05"	""	"0"	"0.0003526"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQTSDLEK"	"[K].aAQTSDLEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"710.90643"	"1420.80559"	"1420.80478"	"0.57"	"0.00040"	"12/84"	"12"	"84"	"1358116.69519043"	"HCD"	"MS2"	"0"	"116.3"	"100.000"	"39.8691"	"11208"	"11208"	"11181"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"207.1"	""	"140.4"	""	"145.7"	""	"191.6"	""	"222.4"	"201.5"	""	"976"	"30"	"36.000"	"29.000"	"0.0467110706791884"	""	"0"	"0.001116"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGTAGSDEK"	"[K].vVGTAGSDEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97584"	"Prostaglandin reductase 1 OS=Rattus norvegicus OX=10116 GN=Ptgr1 PE=2 SV=3"	"P97584"	"Prostaglandin reductase 1 OS=Rattus norvegicus OX=10116 GN=Ptgr1 PE=2 SV=3"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"710.90643"	"1420.80559"	"1420.80478"	"0.57"	"0.00040"	"9/82"	"9"	"82"	"1949093.49591064"	"HCD"	"MS2"	"11.65118"	"145.9"	"100.000"	"38.3694"	"10605"	"10605"	"10584"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"205.0"	""	"207.5"	""	"212.2"	""	"214.8"	""	"262.9"	"281.1"	""	"976"	"53"	"36.000"	"29.000"	"0.000223573240716692"	"24"	"0"	"4.871E-05"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETNYGIPQR"	"[R].dETNYGIPQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"711.36432"	"1421.72136"	"1421.72222"	"-0.61"	"-0.00043"	"7/88"	"7"	"88"	"1437391.77307129"	"HCD"	"MS2"	"0"	"74.8"	"100.000"	"44.6184"	"13134"	"13134"	"13107"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"129.5"	""	"78.4"	""	"96.2"	""	"127.3"	"1.2"	"139.9"	"135.6"	""	"741"	"37"	"35.000"	"28.000"	"0.0075472408978997"	"19"	"0"	"0.0006254"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETNYGIPQR"	"[R].dETNYGIPQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"711.36444"	"1421.72161"	"1421.72222"	"-0.43"	"-0.00031"	"8/88"	"8"	"88"	"2157376.02893066"	"HCD"	"MS2"	"0"	"109.2"	"100.000"	"44.7939"	"13216"	"13216"	"13198"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"198.0"	""	"125.1"	""	"156.3"	""	"169.4"	"8.4"	"193.2"	"182.5"	""	"743"	"32"	"35.000"	"28.000"	"0.0214268741150221"	"22"	"0"	"0.0005595"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETNYGIPQR"	"[R].dETNYGIPQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"711.36450"	"1421.72173"	"1421.72222"	"-0.35"	"-0.00025"	"8/88"	"8"	"88"	"2063672.25482178"	"HCD"	"MS2"	"0"	"98.5"	"100.000"	"44.9046"	"13250"	"13250"	"13232"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"184.0"	""	"121.3"	""	"129.3"	""	"148.8"	"0.8"	"181.3"	"166.4"	""	"738"	"41"	"35.000"	"28.000"	"0.00278629032008545"	"20"	"0"	"0.0004673"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETNYGIPQR"	"[R].dETNYGIPQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"711.36469"	"1421.72209"	"1421.72222"	"-0.09"	"-0.00006"	"9/88"	"9"	"88"	"1702305.35357666"	"HCD"	"MS2"	"8.351497"	"85.4"	"100.000"	"44.4903"	"13094"	"13094"	"13064"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"162.1"	""	"89.0"	""	"109.2"	""	"136.3"	"1.4"	"163.8"	"146.6"	""	"739"	"36"	"35.000"	"28.000"	"0.00854307939969882"	"18"	"0"	"0.0006507"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFTVIDQNR"	"[K].eAFTVIDQNR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04466"	"Myosin regulatory light chain 2, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Mylpf PE=1 SV=2"	"P04466"	"Myosin regulatory light chain 2, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Mylpf PE=1 SV=2"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"711.38123"	"1421.75517"	"1421.75861"	"-2.42"	"-0.00172"	"6/88"	"6"	"88"	"200335.432800293"	"HCD"	"MS2"	"38.82731"	"15.5"	"100.000"	"63.4033"	"20746"	"20746"	"20715"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.1"	""	"9.7"	""	"13.1"	""	"22.4"	"1.5"	"24.5"	"61.6"	""	"882"	"24"	"36.000"	"29.000"	"0.178007618298714"	"21"	"0.0023"	"0.02431"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFTVIDQNR"	"[K].eAFTVIDQNR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04466"	"Myosin regulatory light chain 2, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Mylpf PE=1 SV=2"	"P04466"	"Myosin regulatory light chain 2, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Mylpf PE=1 SV=2"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"711.38373"	"1421.76018"	"1421.75861"	"1.10"	"0.00079"	"6/88"	"6"	"88"	"175015.414794922"	"HCD"	"MS2"	"23.85091"	"15.6"	"100.000"	"63.2959"	"20717"	"20717"	"20694"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.3"	""	"12.4"	""	"11.1"	""	"19.1"	"0.8"	"22.9"	"68.5"	""	"926"	"18"	"36.000"	"29.000"	"0.756103051875076"	"18"	"0.000936"	"0.01275"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLHTLDSHVR"	"[R].dLHTLDSHVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"4"	"4"	"0.7429"	"0.0000"	"1"	"1"	"1"	"356.19754"	"1421.76833"	"1421.76984"	"-1.06"	"-0.00038"	"7/84"	"7"	"84"	"1649167.14337158"	"HCD"	"MS2"	"12.78127"	"43.8"	"100.000"	"34.3149"	"8962"	"8962"	"8935"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.5"	""	"43.0"	""	"57.1"	""	"85.4"	""	"96.0"	"80.4"	""	"926"	"35"	"36.000"	"29.000"	"0.0136326721644882"	"24"	"0"	"0.0007036"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGPGEEFEK"	"[R].aGPGEEFEk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64604"	"Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1"	"Q64604"	"Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"1"	"711.38782"	"1421.76836"	"1421.76767"	"0.49"	"0.00035"	"6/70"	"6"	"70"	"739931.297546387"	"HCD"	"MS2"	"32.80777"	"67.1"	"100.000"	"51.3951"	"15906"	"15906"	"15877"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"77.4"	""	"74.1"	""	"78.9"	""	"116.2"	""	"153.2"	"138.2"	""	"926"	"17"	"36.000"	"29.000"	"0.96289956612901"	"23"	"0.002871"	"0.02676"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLHTLDSHVR"	"[R].dLHTLDSHVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"4"	"4"	"0.7714"	"0.0000"	"1"	"1"	"1"	"356.19791"	"1421.76980"	"1421.76984"	"-0.03"	"-0.00001"	"7/84"	"7"	"84"	"1391150.48052979"	"HCD"	"MS2"	"5.689971"	"39.2"	"100.000"	"34.3743"	"8980"	"8980"	"8951"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.8"	""	"43.2"	""	"49.9"	""	"74.9"	""	"85.6"	"73.3"	""	"937"	"35"	"36.000"	"29.000"	"0.0133878116957116"	"22"	"0"	"0.001533"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLADAEGDVFR"	"[K].tLADAEGDVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"711.87408"	"1422.74089"	"1422.74262"	"-1.22"	"-0.00087"	"7/94"	"7"	"94"	"453490.399169922"	"HCD"	"MS2"	"19.4879"	"26.6"	"100.000"	"77.7761"	"26593"	"26593"	"26578"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.0"	""	"39.6"	""	"41.3"	""	"38.2"	""	"53.8"	"39.9"	""	"831"	"47"	"36.000"	"29.000"	"0.000795373336846262"	"28"	"0"	"0.0002779"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLADAEGDVFR"	"[K].tLADAEGDVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8475"	"0.0000"	"1"	"1"	"1"	"711.87439"	"1422.74150"	"1422.74262"	"-0.79"	"-0.00056"	"8/94"	"8"	"94"	"773534.696350098"	"HCD"	"MS2"	"0"	"39.9"	"100.000"	"77.8741"	"26623"	"26623"	"26604"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.5"	""	"54.3"	""	"58.9"	""	"61.2"	""	"69.0"	"72.2"	""	"849"	"59"	"36.000"	"29.000"	"5.48122581648945E-05"	"25"	"0"	"7.359E-06"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLADAEGDVFR"	"[K].tLADAEGDVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"711.87451"	"1422.74175"	"1422.74262"	"-0.62"	"-0.00044"	"12/94"	"12"	"94"	"343905.942932129"	"HCD"	"MS2"	"6.637787"	"20.8"	"100.000"	"78.4552"	"26857"	"26857"	"26842"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.7"	""	"25.4"	""	"33.5"	""	"28.9"	""	"33.5"	"42.3"	""	"849"	"39"	"36.000"	"29.000"	"0.00510361252495091"	"24"	"0"	"0.0008198"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLADAEGDVFR"	"[K].tLADAEGDVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8429"	"0.0000"	"1"	"1"	"1"	"711.87451"	"1422.74175"	"1422.74262"	"-0.62"	"-0.00044"	"16/94"	"16"	"94"	"4683778.28039551"	"HCD"	"MS2"	"0.3479995"	"200.3"	"100.000"	"78.0533"	"26703"	"26703"	"26696"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"310.8"	""	"281.4"	""	"295.4"	""	"301.9"	"1.1"	"328.0"	"377.2"	""	"849"	"70"	"36.000"	"29.000"	"4.32392044228972E-06"	"28"	"0"	"6.889E-06"	"0.938"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLADAEGDVFR"	"[K].tLADAEGDVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"3"	"3"	"0.7561"	"0.0000"	"1"	"1"	"1"	"474.91882"	"1422.74192"	"1422.74262"	"-0.50"	"-0.00024"	"11/94"	"11"	"94"	"885166.776489258"	"HCD"	"MS2"	"28.92295"	"18.0"	"100.000"	"78.1488"	"26733"	"26733"	"26713"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.1"	""	"26.5"	""	"26.0"	""	"30.8"	""	"22.9"	"36.4"	""	"851"	"41"	"36.000"	"29.000"	"0.00337986663875182"	"26"	"0"	"0.001103"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLADAEGDVFR"	"[K].tLADAEGDVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8281"	"0.0000"	"1"	"1"	"1"	"711.87469"	"1422.74211"	"1422.74262"	"-0.36"	"-0.00026"	"18/94"	"18"	"94"	"620377.196838379"	"HCD"	"MS2"	"2.198745"	"32.1"	"100.000"	"78.3418"	"26817"	"26817"	"26806"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.7"	""	"36.0"	""	"54.0"	""	"50.2"	"0.2"	"56.4"	"58.4"	""	"846"	"64"	"36.000"	"29.000"	"1.87214881509391E-05"	"27"	"0"	"7.711E-06"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLADAEGDVFR"	"[K].tLADAEGDVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"3"	"3"	"0.7297"	"0.0000"	"1"	"1"	"1"	"474.91895"	"1422.74228"	"1422.74262"	"-0.24"	"-0.00011"	"12/94"	"12"	"94"	"790563.007751465"	"HCD"	"MS2"	"24.00685"	"16.9"	"100.000"	"78.0230"	"26691"	"26691"	"26671"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.9"	""	"23.7"	""	"24.7"	""	"29.4"	""	"25.6"	"26.5"	""	"846"	"37"	"36.000"	"29.000"	"0.00942628068141338"	"24"	"0"	"0.001406"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLADAEGDVFR"	"[K].tLADAEGDVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8429"	"0.0000"	"1"	"1"	"1"	"711.87512"	"1422.74297"	"1422.74262"	"0.24"	"0.00017"	"16/94"	"16"	"94"	"4792109.41381836"	"HCD"	"MS2"	"0"	"198.8"	"100.000"	"78.1626"	"26739"	"26739"	"26729"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"311.6"	""	"274.6"	""	"287.0"	""	"313.3"	"1.5"	"335.9"	"357.6"	""	"868"	"70"	"36.000"	"29.000"	"4.44109158649847E-06"	"28"	"0"	"5.219E-06"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYIALNEDLK"	"[R].DYIALNEDLk.[T]"	"K10(TMT6plex)"	"1"	"2"	"P16391"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P16391; P15978"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2; Class I histocompatibility antigen, Non-RT1.A alpha-1 chain OS=Rattus norvegicus OX=10116 GN=RT1-Aw2 PE=1 SV=1"	"0"	"2"	"2"	"0.6512"	"0.0000"	"1"	"1"	"1"	"711.88757"	"1422.76787"	"1422.76778"	"0.07"	"0.00005"	"6/94"	"6"	"94"	"124448.641235352"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"82.7177"	"28576"	"28576"	"28549"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.3"	""	"10.3"	""	"13.4"	""	"11.0"	""	"11.1"	"15.0"	""	"948"	"43"	"36.000"	"29.000"	"0.0023376438307464"	""	"0.001886"	"0.02178"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYIALNEDLK"	"[R].DYIALNEDLk.[T]"	"K10(TMT6plex)"	"1"	"2"	"P16391"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P16391; P15978"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2; Class I histocompatibility antigen, Non-RT1.A alpha-1 chain OS=Rattus norvegicus OX=10116 GN=RT1-Aw2 PE=1 SV=1"	"0"	"2"	"2"	"0.7636"	"0.0000"	"1"	"1"	"1"	"711.88812"	"1422.76897"	"1422.76778"	"0.84"	"0.00060"	"7/94"	"7"	"94"	"114704.317687988"	"HCD"	"MS2"	"27.3134"	"7.7"	"100.000"	"82.7308"	"28579"	"28579"	"28549"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.0"	""	"12.5"	""	"11.2"	""	"9.3"	""	"15.4"	"16.8"	""	"937"	"55"	"36.000"	"29.000"	"0.000143452986868408"	"29"	"0"	"0.003609"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETLETEK"	"[K].dETLETEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85515"	"Alpha-centractin OS=Rattus norvegicus OX=10116 GN=Actr1a PE=1 SV=1"	"P85515"	"Alpha-centractin OS=Rattus norvegicus OX=10116 GN=Actr1a PE=1 SV=1"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"711.88959"	"1422.77190"	"1422.77281"	"-0.64"	"-0.00046"	"7/68"	"7"	"68"	"498536.08026123"	"HCD"	"MS2"	"0"	"54.7"	"100.000"	"43.9359"	"12861"	"12861"	"12837"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.4"	""	"35.9"	""	"57.8"	""	"99.1"	"0.9"	"133.4"	"132.7"	""	"922"	"43"	"36.000"	"29.000"	"0.00213649029998429"	""	"0"	"0.002996"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELDSNLYR"	"[K].aLELDSNLYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.4412"	"0.0000"	"1"	"1"	"1"	"711.89227"	"1422.77727"	"1422.77901"	"-1.22"	"-0.00087"	"7/84"	"7"	"84"	"209325.334716797"	"HCD"	"MS2"	"5.924563"	"13.5"	"100.000"	"80.6341"	"27737"	"27737"	"27720"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.9"	""	"19.4"	""	"17.9"	""	"22.3"	""	"26.3"	"25.5"	""	"911"	"34"	"36.000"	"29.000"	"0.0201135338769434"	""	"0"	"0.001466"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELDSNLYR"	"[K].aLELDSNLYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"711.89246"	"1422.77764"	"1422.77901"	"-0.97"	"-0.00069"	"8/84"	"8"	"84"	"573335.998291016"	"HCD"	"MS2"	"3.917885"	"32.7"	"100.000"	"80.3793"	"27636"	"27636"	"27619"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.5"	""	"44.1"	""	"42.0"	""	"64.4"	""	"61.2"	"61.3"	""	"908"	"63"	"36.000"	"29.000"	"2.22872175773282E-05"	""	"0"	"6.63E-06"	"0.942"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELDSNLYR"	"[K].aLELDSNLYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"711.89258"	"1422.77788"	"1422.77901"	"-0.79"	"-0.00057"	"8/84"	"8"	"84"	"562813.085266113"	"HCD"	"MS2"	"10.13618"	"33.6"	"100.000"	"80.3464"	"27620"	"27620"	"27597"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.4"	""	"47.3"	""	"51.8"	""	"65.6"	""	"58.0"	"56.6"	""	"919"	"60"	"36.000"	"29.000"	"4.2003503445558E-05"	""	"0"	"7.845E-06"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETFDDLPK"	"[K].eTFDDLPk.[W]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"0"	"3"	"3"	"0.4783"	"0.0000"	"1"	"1"	"1"	"474.93372"	"1422.78659"	"1422.78807"	"-1.04"	"-0.00049"	"7/64"	"7"	"64"	"1326028.25933838"	"HCD"	"MS2"	"9.839039"	"57.2"	"100.000"	"72.4620"	"24432"	"24432"	"24409"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.4"	""	"73.9"	""	"74.0"	""	"98.4"	""	"116.6"	"104.9"	""	"892"	"23"	"36.000"	"29.000"	"0.201527751191215"	"26"	"0.009021"	"0.116"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETFDDLPK"	"[K].eTFDDLPk.[W]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"0"	"3"	"3"	"0.5312"	"0.0000"	"1"	"1"	"1"	"474.93372"	"1422.78659"	"1422.78807"	"-1.04"	"-0.00049"	"6/64"	"6"	"64"	"1353098.42523193"	"HCD"	"MS2"	"21.932"	"57.9"	"100.000"	"72.3126"	"24385"	"24385"	"24357"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.8"	""	"75.7"	""	"78.8"	""	"95.7"	""	"115.2"	"117.8"	""	"892"	"32"	"36.000"	"29.000"	"0.0259020930214505"	""	"0.003449"	"0.03373"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETFDDLPK"	"[K].eTFDDLPk.[W]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"711.89764"	"1422.78801"	"1422.78807"	"-0.04"	"-0.00003"	"7/64"	"7"	"64"	"505223.694458008"	"HCD"	"MS2"	"14.46374"	"46.4"	"100.000"	"72.1769"	"24329"	"24329"	"24309"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.0"	""	"52.6"	""	"61.2"	""	"86.3"	"0.1"	"92.1"	"91.9"	""	"929"	"24"	"36.000"	"29.000"	"0.19186056467443"	"29"	"0.0008629"	"0.01055"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"711.90179"	"1422.79631"	"1422.79930"	"-2.10"	"-0.00149"	"6/80"	"6"	"80"	"190568.559448242"	"HCD"	"MS2"	"33.10462"	"19.1"	"100.000"	"63.1094"	"20641"	"20641"	"20618"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.2"	""	"28.4"	""	"23.7"	""	"29.8"	""	"30.4"	"46.0"	""	"898"	"31"	"36.000"	"29.000"	"0.035095088426016"	"20"	"0.0003538"	"0.007091"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"474.93726"	"1422.79721"	"1422.79930"	"-1.47"	"-0.00070"	"8/80"	"8"	"80"	"7015675.38391113"	"HCD"	"MS2"	"6.94691"	"222.4"	"100.000"	"62.1617"	"20257"	"20257"	"20242"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"396.3"	""	"262.8"	""	"295.5"	""	"340.8"	""	"396.5"	"414.4"	""	"904"	"37"	"36.000"	"29.000"	"0.00839727613701447"	"19"	"0"	"0.000157"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"474.93726"	"1422.79721"	"1422.79930"	"-1.47"	"-0.00070"	"8/80"	"8"	"80"	"9332115.10321045"	"HCD"	"MS2"	"3.272183"	"289.9"	"100.000"	"62.0312"	"20191"	"20191"	"20173"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"545.8"	""	"354.1"	""	"352.2"	""	"482.9"	""	"498.0"	"513.0"	""	"904"	"35"	"36.000"	"29.000"	"0.0129759282307516"	"17"	"0"	"0.000184"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9302"	"0.0000"	"1"	"1"	"1"	"474.93729"	"1422.79731"	"1422.79930"	"-1.40"	"-0.00066"	"7/80"	"7"	"80"	"5243857.11547852"	"HCD"	"MS2"	"8.528774"	"163.3"	"100.000"	"62.3266"	"20307"	"20307"	"20293"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"293.4"	""	"196.2"	""	"213.6"	""	"253.6"	""	"266.6"	"328.4"	""	"904"	"43"	"36.000"	"29.000"	"0.00237759804408599"	"18"	"0"	"0.0002522"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"474.93735"	"1422.79749"	"1422.79930"	"-1.27"	"-0.00060"	"8/80"	"8"	"80"	"6967464.29443359"	"HCD"	"MS2"	"8.190677"	"223.4"	"100.000"	"61.8594"	"20137"	"20137"	"20128"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"427.5"	""	"271.8"	""	"285.4"	""	"373.9"	""	"372.5"	"382.9"	""	"906"	"39"	"36.000"	"29.000"	"0.00539632629636401"	"20"	"0"	"9.836E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"711.90247"	"1422.79766"	"1422.79930"	"-1.16"	"-0.00082"	"8/80"	"8"	"80"	"24659452.8685303"	"HCD"	"MS2"	"0"	"781.3"	"42.823"	"62.0473"	"20212"	"20212"	"20197"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1463.7"	""	"938.0"	""	"969.9"	""	"1276.2"	""	"1319.7"	"1428.2"	""	"892"	"58"	"36.000"	"29.000"	"6.67321102618117E-05"	"23"	"0"	"5.216E-05"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"711.90253"	"1422.79778"	"1422.79930"	"-1.07"	"-0.00076"	"9/80"	"9"	"80"	"193185.274719238"	"HCD"	"MS2"	"0"	"20.3"	"100.000"	"63.0993"	"20622"	"20622"	"20598"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.8"	""	"28.3"	""	"21.2"	""	"30.5"	""	"38.4"	"38.9"	""	"894"	"30"	"36.000"	"29.000"	"0.0466989937991698"	"19"	"0.003507"	"0.03654"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"711.90259"	"1422.79790"	"1422.79930"	"-0.98"	"-0.00070"	"8/80"	"8"	"80"	"5358191.62945557"	"HCD"	"MS2"	"0"	"432.2"	"100.000"	"61.7746"	"20103"	"20103"	"20092"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"854.1"	""	"547.7"	""	"539.0"	""	"727.5"	""	"702.4"	"717.1"	""	"892"	"56"	"36.000"	"29.000"	"0.000104312140844207"	"22"	"0"	"7.868E-05"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"711.90259"	"1422.79790"	"1422.79930"	"-0.98"	"-0.00070"	"9/80"	"9"	"80"	"26372229.8248291"	"HCD"	"MS2"	"0"	"955.7"	"48.863"	"62.1779"	"20249"	"20249"	"20237"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1787.4"	""	"1164.1"	""	"1188.2"	""	"1546.8"	""	"1596.4"	"1762.9"	""	"892"	"58"	"36.000"	"29.000"	"6.47641781444132E-05"	"23"	"0"	"8.593E-05"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"711.90271"	"1422.79814"	"1422.79930"	"-0.81"	"-0.00058"	"9/80"	"9"	"80"	"3533337.42822266"	"HCD"	"MS2"	"0"	"281.1"	"100.000"	"62.4413"	"20353"	"20353"	"20344"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"520.7"	""	"323.0"	""	"369.0"	""	"452.3"	""	"474.6"	"520.5"	""	"898"	"56"	"36.000"	"29.000"	"0.000119741954037014"	"22"	"0"	"7.205E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"711.90283"	"1422.79839"	"1422.79930"	"-0.64"	"-0.00046"	"8/80"	"8"	"80"	"382573.623046875"	"HCD"	"MS2"	"0"	"34.3"	"100.000"	"62.6994"	"20475"	"20475"	"20449"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.4"	""	"44.0"	""	"41.7"	""	"52.5"	""	"63.5"	"64.1"	""	"927"	"57"	"36.000"	"29.000"	"9.07924506170027E-05"	"24"	"0"	"8.236E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"711.90295"	"1422.79863"	"1422.79930"	"-0.47"	"-0.00033"	"8/80"	"8"	"80"	"5083485.425354"	"HCD"	"MS2"	"0"	"395.1"	"100.000"	"61.9097"	"20143"	"20143"	"20126"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"763.1"	""	"472.5"	""	"477.0"	""	"675.0"	""	"656.9"	"694.5"	""	"924"	"56"	"36.000"	"29.000"	"0.000119300420807318"	"23"	"0"	"7.243E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"711.90308"	"1422.79888"	"1422.79930"	"-0.30"	"-0.00021"	"7/80"	"7"	"80"	"410523.294372559"	"HCD"	"MS2"	"0"	"40.0"	"100.000"	"62.7518"	"20480"	"20480"	"20458"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.7"	""	"50.8"	""	"55.9"	""	"61.8"	"0.1"	"69.1"	"77.1"	""	"922"	"32"	"36.000"	"29.000"	"0.0284250295858143"	"21"	"0"	"0.002705"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"711.90350"	"1422.79973"	"1422.79930"	"0.30"	"0.00021"	"9/80"	"9"	"80"	"4027325.9385376"	"HCD"	"MS2"	"0"	"326.4"	"100.000"	"62.3040"	"20314"	"20314"	"20307"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"606.9"	""	"371.0"	""	"414.8"	""	"517.1"	""	"566.7"	"615.0"	""	"905"	"57"	"36.000"	"29.000"	"9.87685285108959E-05"	"25"	"0"	"3.42E-05"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFEANAPAFDR"	"[R].gFEANAPAFDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62910"	"Synaptojanin-1 OS=Rattus norvegicus OX=10116 GN=Synj1 PE=1 SV=3"	"Q62910"	"Synaptojanin-1 OS=Rattus norvegicus OX=10116 GN=Synj1 PE=1 SV=3"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"712.36011"	"1423.71294"	"1423.71674"	"-2.67"	"-0.00190"	"12/106"	"12"	"106"	"436071.396911621"	"HCD"	"MS2"	"19.28125"	"29.6"	"100.000"	"63.4343"	"20773"	"20773"	"20747"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.9"	""	"36.1"	""	"32.8"	""	"52.0"	""	"55.0"	"67.0"	""	"664"	"19"	"35.000"	"28.000"	"0.378562929470308"	"20"	"0.0004639"	"0.008021"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFEDIHQYR"	"[K].sFEDIHQYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P20171"	"GTPase HRas OS=Rattus norvegicus OX=10116 GN=Hras PE=1 SV=2"	"P20171"	"GTPase HRas OS=Rattus norvegicus OX=10116 GN=Hras PE=1 SV=2"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"475.24274"	"1423.71366"	"1423.71674"	"-2.17"	"-0.00103"	"6/74"	"6"	"74"	"2238631.49993896"	"HCD"	"MS2"	"14.45409"	"71.3"	"100.000"	"45.3397"	"13428"	"13428"	"13403"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"89.6"	""	"83.4"	""	"101.3"	""	"124.7"	"2.9"	"138.7"	"135.2"	""	"671"	"31"	"35.000"	"28.000"	"0.0277774595925488"	"23"	"0.0002479"	"0.005068"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFEANAPAFDR"	"[R].gFEANAPAFDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62910"	"Synaptojanin-1 OS=Rattus norvegicus OX=10116 GN=Synj1 PE=1 SV=3"	"Q62910"	"Synaptojanin-1 OS=Rattus norvegicus OX=10116 GN=Synj1 PE=1 SV=3"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"712.36084"	"1423.71440"	"1423.71674"	"-1.64"	"-0.00117"	"8/106"	"8"	"106"	"496467.650939941"	"HCD"	"MS2"	"0"	"32.5"	"100.000"	"63.5947"	"20824"	"20824"	"20795"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.6"	""	"40.6"	""	"38.3"	""	"56.4"	"2.2"	"65.4"	"63.4"	""	"681"	"21"	"35.000"	"28.000"	"0.299307166980916"	"16"	"0.0008629"	"0.01011"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGFSLDNGDLR"	"[K].tGFSLDNGDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"712.37189"	"1423.73650"	"1423.73787"	"-0.97"	"-0.00069"	"8/104"	"8"	"104"	"329824.105651855"	"HCD"	"MS2"	"0"	"23.9"	"100.000"	"70.9073"	"23812"	"23812"	"23793"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.5"	""	"23.8"	""	"37.0"	""	"48.7"	""	"37.6"	"50.6"	""	"783"	"35"	"35.000"	"28.000"	"0.0137635912466829"	"24"	"0"	"0.0008195"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGFSLDNGDLR"	"[K].tGFSLDNGDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"0"	"2"	"2"	"0.9385"	"0.0000"	"1"	"1"	"1"	"712.37219"	"1423.73711"	"1423.73787"	"-0.54"	"-0.00038"	"9/104"	"9"	"104"	"748651.461364746"	"HCD"	"MS2"	"48.24171"	"52.2"	"100.000"	"70.6105"	"23691"	"23691"	"23672"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.5"	""	"53.6"	""	"74.3"	""	"97.2"	""	"92.8"	"115.9"	""	"798"	"65"	"36.000"	"29.000"	"1.39306985875956E-05"	"20"	"0"	"7.433E-05"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGFSLDNGDLR"	"[K].tGFSLDNGDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"712.37256"	"1423.73784"	"1423.73787"	"-0.02"	"-0.00002"	"7/104"	"7"	"104"	"233719.938598633"	"HCD"	"MS2"	"0"	"18.6"	"100.000"	"71.0817"	"23870"	"23870"	"23845"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.8"	""	"19.0"	""	"20.8"	""	"40.9"	""	"38.1"	"35.4"	""	"798"	"29"	"36.000"	"29.000"	"0.0553315575719884"	"15"	"0"	"0.003621"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGFSLDNGDLR"	"[K].tGFSLDNGDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"712.37292"	"1423.73857"	"1423.73787"	"0.49"	"0.00035"	"8/104"	"8"	"104"	"777590.241699219"	"HCD"	"MS2"	"43.03545"	"53.9"	"100.000"	"70.7527"	"23735"	"23735"	"23717"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"74.8"	""	"58.5"	""	"72.8"	""	"97.7"	""	"105.3"	"106.1"	""	"824"	"54"	"36.000"	"29.000"	"0.000183188082197273"	"22"	"0"	"2.663E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDDTNPEK"	"[R].fDDTNPEk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"712.37665"	"1423.74602"	"1423.74693"	"-0.64"	"-0.00046"	"7/72"	"7"	"72"	"673879.873474121"	"HCD"	"MS2"	"22.0439"	"65.8"	"100.000"	"48.6623"	"14793"	"14793"	"14767"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"80.9"	""	"59.5"	""	"74.5"	""	"112.4"	""	"145.4"	"155.0"	""	"837"	"43"	"36.000"	"29.000"	"0.00200768448254454"	"25"	"0"	"0.001876"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDDTNPEK"	"[R].fDDTNPEk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"712.37689"	"1423.74651"	"1423.74693"	"-0.30"	"-0.00021"	"7/72"	"7"	"72"	"665530.132263184"	"HCD"	"MS2"	"26.56369"	"64.6"	"100.000"	"48.9466"	"14896"	"14896"	"14872"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.9"	""	"62.6"	""	"65.5"	""	"114.4"	""	"148.9"	"147.9"	""	"833"	"41"	"36.000"	"29.000"	"0.00337765280596125"	"26"	"0.0004639"	"0.007474"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDNFVDK"	"[K].eVDNFVDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"712.39471"	"1423.78215"	"1423.78332"	"-0.82"	"-0.00058"	"14/76"	"14"	"76"	"1014161.66564941"	"HCD"	"MS2"	"0"	"88.5"	"100.000"	"65.8209"	"21724"	"21724"	"21708"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"100.5"	""	"81.6"	""	"75.4"	""	"186.5"	""	"206.9"	"192.4"	""	"885"	"47"	"36.000"	"29.000"	"0.000901391119384781"	"29"	"0"	"0.002828"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDNFVDK"	"[K].eVDNFVDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"712.39471"	"1423.78215"	"1423.78332"	"-0.82"	"-0.00058"	"14/76"	"14"	"76"	"1018554.35461426"	"HCD"	"MS2"	"8.088315"	"89.9"	"100.000"	"65.7365"	"21705"	"21705"	"21686"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.2"	""	"82.0"	""	"94.0"	""	"179.2"	""	"201.2"	"193.9"	""	"885"	"47"	"36.000"	"29.000"	"0.000918149231473798"	"28"	"0"	"0.002585"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIIPNPQER"	"[K].iDIIPNPQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"712.40796"	"1423.80864"	"1423.81064"	"-1.41"	"-0.00100"	"5/94"	"5"	"94"	"316884.353210449"	"HCD"	"MS2"	"18.92179"	"19.1"	"100.000"	"79.0181"	"27088"	"27088"	"27071"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.9"	""	"21.6"	""	"22.4"	""	"31.7"	""	"34.7"	"40.8"	""	"802"	"24"	"36.000"	"29.000"	"0.1742385998928"	"20"	"0.001374"	"0.0173"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIIPNPQER"	"[K].iDIIPNPQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"712.40851"	"1423.80974"	"1423.81064"	"-0.64"	"-0.00045"	"7/94"	"7"	"94"	"343368.820678711"	"HCD"	"MS2"	"14.74404"	"19.6"	"100.000"	"79.0226"	"27086"	"27086"	"27068"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.6"	""	"21.0"	""	"26.3"	""	"35.4"	""	"33.1"	"38.5"	""	"804"	"21"	"36.000"	"29.000"	"0.327511122176377"	"18"	"0.001211"	"0.01421"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WNEEVEAYR"	"[K].wNEEVEAYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9773"	"0.0000"	"1"	"1"	"1"	"712.85260"	"1424.69792"	"1424.70076"	"-1.99"	"-0.00142"	"7/84"	"7"	"84"	"1574634.83752441"	"HCD"	"MS2"	"25.99247"	"103.0"	"100.000"	"65.9938"	"21795"	"21795"	"21769"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"132.8"	""	"133.7"	""	"116.5"	""	"155.4"	""	"219.7"	"228.9"	""	"545"	"44"	"34.000"	"27.000"	"0.0012144132768832"	"16"	"0"	"0.0003974"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WNEEVEAYR"	"[K].wNEEVEAYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"712.85309"	"1424.69890"	"1424.70076"	"-1.31"	"-0.00093"	"6/84"	"6"	"84"	"1340321.45623779"	"HCD"	"MS2"	"29.57687"	"93.5"	"100.000"	"65.8978"	"21771"	"21771"	"21749"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"120.9"	""	"120.5"	""	"107.9"	""	"143.2"	""	"190.2"	"205.8"	""	"551"	"39"	"34.000"	"27.000"	"0.00354912751491458"	"17"	"0"	"0.0007849"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WNEEVEAYR"	"[K].wNEEVEAYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"712.85358"	"1424.69988"	"1424.70076"	"-0.62"	"-0.00044"	"7/84"	"7"	"84"	"7282365.66345215"	"HCD"	"MS2"	"0"	"367.3"	"100.000"	"66.1791"	"21886"	"21886"	"21873"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"514.0"	""	"463.5"	""	"362.3"	""	"491.6"	""	"811.6"	"851.8"	""	"553"	"46"	"34.000"	"27.000"	"0.000655684829615447"	"20"	"0"	"0.001176"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WNEEVEAYR"	"[K].wNEEVEAYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"712.85388"	"1424.70049"	"1424.70076"	"-0.19"	"-0.00014"	"7/84"	"7"	"84"	"7021642.00213623"	"HCD"	"MS2"	"0"	"376.3"	"100.000"	"66.2799"	"21912"	"21912"	"21896"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"514.2"	""	"453.9"	""	"414.0"	""	"506.4"	"6.1"	"832.6"	"850.4"	""	"554"	"45"	"34.000"	"27.000"	"0.000978317380323721"	"20"	"0"	"0.001171"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WNEEVEAYR"	"[K].wNEEVEAYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"712.85394"	"1424.70061"	"1424.70076"	"-0.11"	"-0.00008"	"7/84"	"7"	"84"	"864804.312927246"	"HCD"	"MS2"	"0"	"53.7"	"100.000"	"66.4973"	"22015"	"22015"	"21997"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"77.9"	""	"68.2"	""	"54.3"	""	"74.1"	""	"119.3"	"117.1"	""	"554"	"42"	"34.000"	"27.000"	"0.00163109692533498"	"15"	"0"	"0.0002287"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WNEEVEAYR"	"[K].wNEEVEAYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"712.85431"	"1424.70134"	"1424.70076"	"0.41"	"0.00029"	"7/84"	"7"	"84"	"705073.01348877"	"HCD"	"MS2"	"2.160985"	"45.1"	"100.000"	"66.5908"	"22038"	"22038"	"22021"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.1"	""	"59.0"	""	"49.2"	""	"75.5"	""	"82.9"	"99.3"	""	"555"	"44"	"34.000"	"27.000"	"0.00114357061549509"	"17"	"0"	"0.0001675"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGFSLDNGDLR"	"[K].tGFSLDnGDLR.[S]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"712.87463"	"1424.74199"	"1424.72189"	"14.11"	"0.01005"	"9/104"	"9"	"104"	"917947.448486328"	"HCD"	"MS2"	"13.70217"	"53.4"	"100.000"	"74.9710"	"25446"	"25446"	"25425"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.1"	""	"60.5"	""	"69.3"	""	"83.5"	""	"111.5"	"109.7"	""	"797"	"24"	"36.000"	"29.000"	"0.178003411472159"	"21"	"0.003111"	"0.03128"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGFSLDNGDLR"	"[K].tGFSLDnGDLR.[S]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"712.87524"	"1424.74321"	"1424.72189"	"14.97"	"0.01066"	"8/104"	"8"	"104"	"774039.078552246"	"HCD"	"MS2"	"0"	"46.0"	"100.000"	"74.8475"	"25413"	"25413"	"25398"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"64.5"	""	"54.3"	""	"59.5"	""	"75.1"	""	"96.0"	"90.1"	""	"793"	"19"	"35.000"	"28.000"	"0.467997132035911"	"25"	"0.006189"	"0.07032"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDVQGYAAK"	"[R].dDVQGYAAk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"712.89276"	"1424.77825"	"1424.77857"	"-0.22"	"-0.00016"	"8/76"	"8"	"76"	"999667.012939453"	"HCD"	"MS2"	"31.02034"	"92.1"	"100.000"	"45.9401"	"13684"	"13684"	"13658"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"154.2"	""	"96.2"	""	"103.0"	""	"160.6"	""	"169.0"	"190.3"	""	"859"	"52"	"36.000"	"29.000"	"0.00024432233379743"	"20"	"0"	"0.0001476"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDVQGYAAK"	"[R].dDVQGYAAk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"712.89337"	"1424.77947"	"1424.77857"	"0.63"	"0.00045"	"8/76"	"8"	"76"	"964570.34362793"	"HCD"	"MS2"	"30.98885"	"87.7"	"100.000"	"46.1335"	"13751"	"13751"	"13725"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"144.7"	""	"81.6"	""	"96.8"	""	"138.5"	""	"180.8"	"190.7"	""	"845"	"58"	"36.000"	"29.000"	"7.49595055676095E-05"	"18"	"0"	"6.561E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPPGSGEPPK"	"[K].tPPGSGEPPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"712.91028"	"1424.81328"	"1424.81495"	"-1.17"	"-0.00084"	"8/84"	"8"	"84"	"497155.944030762"	"HCD"	"MS2"	"23.91097"	"29.6"	"100.000"	"35.0350"	"9254"	"9254"	"9226"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.5"	""	"35.8"	""	"38.4"	""	"64.7"	""	"55.3"	"47.0"	""	"696"	"38"	"35.000"	"28.000"	"0.00596457143012932"	"20"	"0.005921"	"0.06837"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPPGSGEPPK"	"[K].tPPGSGEPPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"712.91077"	"1424.81426"	"1424.81495"	"-0.49"	"-0.00035"	"9/84"	"9"	"84"	"529809.605895996"	"HCD"	"MS2"	"34.88872"	"29.3"	"100.000"	"35.3662"	"9389"	"9389"	"9364"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.0"	""	"30.7"	""	"38.1"	""	"53.0"	""	"62.6"	"47.6"	""	"714"	"44"	"35.000"	"28.000"	"0.00151938633488746"	"22"	"0.001211"	"0.01427"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPPGSGEPPK"	"[K].tPPGSGEPPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"712.91083"	"1424.81438"	"1424.81495"	"-0.40"	"-0.00029"	"6/84"	"6"	"84"	"372070.99597168"	"HCD"	"MS2"	"44.30531"	"23.4"	"100.000"	"35.0827"	"9268"	"9268"	"9239"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.5"	""	"30.4"	""	"32.8"	""	"40.2"	""	"45.2"	"37.6"	""	"713"	"39"	"35.000"	"28.000"	"0.00462444410105781"	"23"	"0.00736"	"0.08462"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDAVYTGLNTR"	"[K].sDAVYTGLNTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"0"	"2"	"2"	"0.7414"	"0.0000"	"1"	"1"	"1"	"713.38007"	"1425.75286"	"1425.75352"	"-0.47"	"-0.00033"	"9/102"	"9"	"102"	"830309.590515137"	"HCD"	"MS2"	"6.550092"	"59.2"	"100.000"	"50.7422"	"15629"	"15629"	"15608"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.9"	""	"83.0"	""	"66.9"	""	"101.2"	"1.1"	"117.9"	"116.0"	""	"792"	"58"	"35.000"	"28.000"	"6.43717307277192E-05"	""	"0"	"8.597E-06"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDAVYTGLNTR"	"[K].sDAVYTGLNTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"713.38019"	"1425.75310"	"1425.75352"	"-0.30"	"-0.00021"	"9/102"	"9"	"102"	"971246.592041016"	"HCD"	"MS2"	"5.190759"	"61.6"	"100.000"	"50.3248"	"15470"	"15470"	"15453"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"77.0"	""	"73.9"	""	"68.9"	""	"113.1"	"0.5"	"121.8"	"130.1"	""	"773"	"66"	"35.000"	"28.000"	"1.02129098470493E-05"	""	"0"	"1.685E-06"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHDNLSDLR"	"[R].nLHDNLSDLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P97608"	"5-oxoprolinase OS=Rattus norvegicus OX=10116 GN=Oplah PE=1 SV=2"	"P97608"	"5-oxoprolinase OS=Rattus norvegicus OX=10116 GN=Oplah PE=1 SV=2"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"475.92615"	"1425.76389"	"1425.76476"	"-0.61"	"-0.00029"	"7/98"	"7"	"98"	"3025616.87854004"	"HCD"	"MS2"	"36.53809"	"79.9"	"100.000"	"45.7353"	"13588"	"13588"	"13566"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.0"	""	"82.8"	""	"106.8"	""	"171.8"	"0.4"	"159.5"	"151.2"	""	"814"	"27"	"36.000"	"29.000"	"0.0878201974525134"	"20"	"0"	"0.001344"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHDNLSDLR"	"[R].nLHDNLSDLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P97608"	"5-oxoprolinase OS=Rattus norvegicus OX=10116 GN=Oplah PE=1 SV=2"	"P97608"	"5-oxoprolinase OS=Rattus norvegicus OX=10116 GN=Oplah PE=1 SV=2"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"475.92615"	"1425.76389"	"1425.76476"	"-0.61"	"-0.00029"	"7/98"	"7"	"98"	"3100281.57757568"	"HCD"	"MS2"	"34.43348"	"87.8"	"100.000"	"45.5903"	"13541"	"13541"	"13518"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"106.4"	""	"94.1"	""	"103.4"	""	"181.2"	"1.6"	"177.5"	"169.5"	""	"814"	"27"	"36.000"	"29.000"	"0.0764881944438929"	"19"	"0"	"0.0009172"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVGNQPADIGR"	"[R].vAVGNQPADIGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P18589"	"Interferon-induced GTP-binding protein Mx2 OS=Rattus norvegicus OX=10116 GN=Mx2 PE=2 SV=1"	"P18589"	"Interferon-induced GTP-binding protein Mx2 OS=Rattus norvegicus OX=10116 GN=Mx2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.40344"	"1425.79961"	"1425.80114"	"-1.08"	"-0.00077"	"7/102"	"7"	"102"	"346660.501586914"	"HCD"	"MS2"	"0"	"27.7"	"100.000"	"47.6368"	"14375"	"14375"	"14349"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.2"	""	"35.5"	""	"30.3"	""	"34.5"	""	"65.7"	"65.3"	""	"749"	"25"	"35.000"	"28.000"	"0.117071672298792"	"14"	"0"	"0.00308"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIPASDLPQVR"	"[K].tIPASDLPQVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"713.41638"	"1425.82549"	"1425.82629"	"-0.57"	"-0.00040"	"8/94"	"8"	"94"	"271965.077514648"	"HCD"	"MS2"	"46.08387"	"16.2"	"100.000"	"69.0073"	"23024"	"23024"	"22996"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.3"	""	"19.2"	""	"24.0"	""	"21.2"	"1.2"	"33.9"	"32.7"	""	"678"	"17"	"35.000"	"28.000"	"0.611223014151394"	"19"	"0.007018"	"0.08131"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEYLSNADER"	"[R].tEYLSNADER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.85376"	"1426.70024"	"1426.70115"	"-0.64"	"-0.00046"	"6/96"	"6"	"96"	"291969.844238281"	"HCD"	"MS2"	"8.61658"	"26.6"	"100.000"	"41.9325"	"12046"	"12046"	"12017"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.3"	""	"33.6"	""	"34.3"	""	"38.6"	""	"51.6"	"51.3"	""	"518"	"37"	"34.000"	"27.000"	"0.00557570469293613"	"15"	"0"	"0.002895"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEYLSNADER"	"[R].tEYLSNADER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8600"	"0.0000"	"1"	"1"	"1"	"713.85437"	"1426.70146"	"1426.70115"	"0.22"	"0.00016"	"9/96"	"9"	"96"	"1066070.25042725"	"HCD"	"MS2"	"0"	"62.0"	"100.000"	"41.4031"	"11840"	"11840"	"11813"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.2"	""	"73.4"	""	"83.7"	""	"107.0"	""	"120.8"	"91.3"	""	"517"	"50"	"34.000"	"27.000"	"0.000246865583486541"	"23"	"0"	"3.424E-05"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEYLSNADER"	"[R].tEYLSNADER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"713.85449"	"1426.70171"	"1426.70115"	"0.39"	"0.00028"	"16/96"	"16"	"96"	"1153543.48522949"	"HCD"	"MS2"	"0"	"67.3"	"100.000"	"41.5853"	"11904"	"11904"	"11881"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"126.4"	""	"80.2"	""	"81.9"	""	"109.1"	""	"139.5"	"103.8"	""	"517"	"54"	"34.000"	"27.000"	"0.000114672834456275"	"24"	"0"	"1.228E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMEESSEK"	"[K].eMEESSEk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"713.85931"	"1426.71135"	"1426.71358"	"-1.56"	"-0.00112"	"14/68"	"14"	"68"	"476279.47668457"	"HCD"	"MS2"	"0"	"50.1"	"100.000"	"31.3644"	"7768"	"7768"	"7740"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.9"	""	"39.9"	""	"49.1"	""	"89.5"	""	"121.3"	"101.1"	""	"566"	"46"	"34.000"	"27.000"	"0.000739241663294975"	"25"	"0"	"0.001432"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMEESSEK"	"[K].eMEESSEk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"713.86078"	"1426.71428"	"1426.71358"	"0.49"	"0.00035"	"7/68"	"7"	"68"	"425185.052368164"	"HCD"	"MS2"	"0"	"41.9"	"100.000"	"31.4271"	"7784"	"7784"	"7757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"69.4"	""	"29.7"	""	"46.3"	""	"67.4"	""	"99.1"	"85.9"	""	"561"	"40"	"34.000"	"27.000"	"0.0028769536531352"	""	"0"	"0.00167"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVYSPESSVR"	"[R].sSVYSPESSVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C644"	"Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Rattus norvegicus OX=10116 GN=Ppip5k1 PE=1 SV=1"	"P0C644"	"Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Rattus norvegicus OX=10116 GN=Ppip5k1 PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"713.87164"	"1426.73601"	"1426.73754"	"-1.07"	"-0.00076"	"9/96"	"9"	"96"	"422190.703674316"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"39.0869"	"10898"	"10898"	"10870"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.2"	""	"40.1"	""	"32.0"	""	"33.4"	"1.0"	"51.4"	"57.5"	""	"662"	"37"	"35.000"	"28.000"	"0.00724149097527303"	"19"	"0"	"0.002076"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVYSPESSVR"	"[R].sSVYSPESSVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C644"	"Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Rattus norvegicus OX=10116 GN=Ppip5k1 PE=1 SV=1"	"P0C644"	"Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Rattus norvegicus OX=10116 GN=Ppip5k1 PE=1 SV=1"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"713.87213"	"1426.73699"	"1426.73754"	"-0.39"	"-0.00028"	"7/96"	"7"	"96"	"418467.846069336"	"HCD"	"MS2"	"0"	"26.4"	"100.000"	"39.3084"	"10979"	"10979"	"10956"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.3"	""	"38.5"	""	"38.9"	""	"33.9"	"0.7"	"44.5"	"58.2"	""	"680"	"32"	"35.000"	"28.000"	"0.0216510477108691"	"18"	"0"	"0.002635"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NHEEEISALR"	"[K].nHEEEISALR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"476.25299"	"1426.74442"	"1426.74877"	"-3.05"	"-0.00145"	"7/98"	"7"	"98"	"8808552.14196777"	"HCD"	"MS2"	"11.4716"	"179.6"	"100.000"	"31.8381"	"7961"	"7961"	"7941"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"230.1"	""	"228.5"	""	"243.0"	""	"301.6"	""	"356.6"	"347.3"	""	"684"	"51"	"35.000"	"28.000"	"0.000287095315389634"	"19"	"0"	"0.0002719"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NHEEEISALR"	"[K].nHEEEISALR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"713.87653"	"1426.74578"	"1426.74877"	"-2.10"	"-0.00150"	"8/98"	"8"	"98"	"428528.768737793"	"HCD"	"MS2"	"0"	"23.0"	"100.000"	"31.8517"	"7967"	"7967"	"7941"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.2"	""	"27.7"	""	"31.5"	""	"42.1"	""	"50.1"	"38.0"	""	"698"	"50"	"35.000"	"28.000"	"0.000371385913360286"	"24"	"0"	"0.0001405"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NHEEEISALR"	"[K].nHEEEISALR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"476.25375"	"1426.74671"	"1426.74877"	"-1.45"	"-0.00069"	"6/98"	"6"	"98"	"8331492.39898682"	"HCD"	"MS2"	"9.292071"	"158.0"	"100.000"	"31.8387"	"7952"	"7952"	"7929"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"216.1"	""	"184.4"	""	"230.6"	""	"267.4"	""	"314.5"	"287.8"	""	"707"	"39"	"35.000"	"28.000"	"0.00480163803368559"	"17"	"0"	"0.0009654"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NHEEEISALR"	"[K].nHEEEISALR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"713.87811"	"1426.74895"	"1426.74877"	"0.12"	"0.00009"	"6/98"	"6"	"98"	"386082.57611084"	"HCD"	"MS2"	"0"	"22.3"	"100.000"	"31.8913"	"7974"	"7974"	"7945"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.0"	""	"21.9"	""	"29.1"	""	"43.5"	""	"47.0"	"36.0"	""	"697"	"40"	"35.000"	"28.000"	"0.00376012932697095"	"23"	"0"	"0.0003864"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEEVMFK"	"[R].eGEEVMFk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"713.88574"	"1426.76421"	"1426.76522"	"-0.71"	"-0.00051"	"7/62"	"7"	"62"	"1137065.93798828"	"HCD"	"MS2"	"4.452558"	"106.8"	"100.000"	"67.3111"	"22348"	"22348"	"22332"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"164.6"	""	"136.7"	""	"164.5"	""	"113.2"	""	"214.6"	"220.0"	""	"746"	"41"	"35.000"	"28.000"	"0.00303185782529209"	"27"	"0"	"0.002949"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEEVMFK"	"[R].eGEEVMFk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"713.88605"	"1426.76482"	"1426.76522"	"-0.28"	"-0.00020"	"7/62"	"7"	"62"	"1250539.39837646"	"HCD"	"MS2"	"9.030941"	"123.1"	"100.000"	"67.4026"	"22370"	"22370"	"22354"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"187.0"	""	"175.7"	""	"175.6"	""	"124.1"	"0.1"	"253.7"	"251.9"	""	"743"	"42"	"35.000"	"28.000"	"0.00246580550654309"	"27"	"0"	"0.00153"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEEVMFK"	"[R].eGEEVMFk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"713.88672"	"1426.76616"	"1426.76522"	"0.66"	"0.00047"	"7/62"	"7"	"62"	"1105943.64526367"	"HCD"	"MS2"	"43.96811"	"97.0"	"100.000"	"67.0249"	"22231"	"22231"	"22204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"131.8"	""	"125.3"	""	"124.9"	""	"149.5"	""	"198.4"	"191.1"	""	"731"	"30"	"35.000"	"28.000"	"0.0345849682479197"	"28"	"0.0008629"	"0.00981"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEEVMFK"	"[R].eGEEVMFk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"713.88672"	"1426.76616"	"1426.76522"	"0.66"	"0.00047"	"6/62"	"6"	"62"	"917786.336242676"	"HCD"	"MS2"	"39.58791"	"77.8"	"100.000"	"67.1140"	"22252"	"22252"	"22226"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"111.5"	""	"95.9"	""	"108.5"	""	"118.5"	""	"158.7"	"145.4"	""	"731"	"26"	"35.000"	"28.000"	"0.101364849825025"	"26"	"0.0006732"	"0.009187"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DELFTDTK"	"[R].dELFTDTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"713.89459"	"1426.78191"	"1426.78298"	"-0.75"	"-0.00054"	"7/68"	"7"	"68"	"292009.413757324"	"HCD"	"MS2"	"10.83772"	"29.1"	"100.000"	"70.2129"	"23515"	"23515"	"23493"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.8"	""	"35.4"	""	"37.8"	""	"42.9"	"0.3"	"52.9"	"54.9"	""	"695"	"43"	"35.000"	"28.000"	"0.00191405674500877"	"24"	"0"	"0.001424"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DELFTDTK"	"[R].dELFTDTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"0"	"2"	"2"	"0.6458"	"0.0000"	"1"	"1"	"1"	"713.89478"	"1426.78227"	"1426.78298"	"-0.50"	"-0.00035"	"14/68"	"14"	"68"	"430257.34185791"	"HCD"	"MS2"	"0"	"40.7"	"100.000"	"70.0036"	"23444"	"23444"	"23421"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.6"	""	"52.5"	""	"58.2"	""	"65.0"	""	"64.9"	"72.3"	""	"687"	"48"	"35.000"	"28.000"	"0.000545665808143337"	""	"0"	"0.001078"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DELFTDTK"	"[R].dELFTDTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"713.89496"	"1426.78264"	"1426.78298"	"-0.24"	"-0.00017"	"7/68"	"7"	"68"	"465292.609313965"	"HCD"	"MS2"	"11.88857"	"46.4"	"100.000"	"69.8462"	"23366"	"23366"	"23339"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"89.4"	""	"65.2"	""	"65.2"	""	"62.6"	"0.7"	"79.7"	"75.7"	""	"687"	"34"	"35.000"	"28.000"	"0.0122159357928446"	"23"	"0.0001301"	"0.003956"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DELFTDTK"	"[R].dELFTDTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"0"	"2"	"2"	"0.6458"	"0.0000"	"1"	"1"	"1"	"713.89508"	"1426.78288"	"1426.78298"	"-0.07"	"-0.00005"	"14/68"	"14"	"68"	"381974.051269531"	"HCD"	"MS2"	"0"	"34.5"	"100.000"	"69.6715"	"23309"	"23309"	"23278"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.8"	""	"42.7"	""	"50.4"	""	"47.4"	""	"51.8"	"59.3"	""	"687"	"48"	"35.000"	"28.000"	"0.000509244962247635"	""	"0"	"0.0008238"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAADEPKPK"	"[M].aAADEPkPk.[K]"	"N-Term(Prot)(Acetyl); K7(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"713.91852"	"1426.82976"	"1426.83060"	"-0.59"	"-0.00042"	"10/70"	"10"	"70"	"2337952.55059814"	"HCD"	"MS2"	"0"	"146.3"	"100.000"	"36.5436"	"9866"	"9866"	"9850"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"226.3"	""	"203.4"	""	"224.9"	""	"231.0"	""	"245.1"	"253.5"	""	"585"	"21"	"34.000"	"27.000"	"0.216334542954534"	"22"	"0.005119"	"0.05796"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAADEPKPK"	"[M].aAADEPkPk.[K]"	"N-Term(Prot)(Acetyl); K7(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"713.91895"	"1426.83061"	"1426.83060"	"0.01"	"0.00001"	"5/70"	"5"	"70"	"1171248.51611328"	"HCD"	"MS2"	"0"	"81.2"	"100.000"	"36.4621"	"9827"	"9827"	"9806"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"130.0"	""	"117.4"	""	"118.8"	""	"135.5"	"1.2"	"136.8"	"128.5"	""	"562"	"19"	"34.000"	"27.000"	"0.32787350239413"	"25"	"0.001546"	"0.01894"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAADEPKPK"	"[M].aAADEPkPk.[K]"	"N-Term(Prot)(Acetyl); K7(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"713.91913"	"1426.83098"	"1426.83060"	"0.27"	"0.00019"	"10/70"	"10"	"70"	"2176759.76965332"	"HCD"	"MS2"	"0"	"137.4"	"100.000"	"36.7497"	"9944"	"9944"	"9925"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"198.7"	""	"185.1"	""	"209.2"	""	"207.8"	""	"240.0"	"262.3"	""	"563"	"34"	"34.000"	"27.000"	"0.0124875833266698"	"22"	"0.0008629"	"0.01066"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAADEPKPK"	"[M].aAADEPkPk.[K]"	"N-Term(Prot)(Acetyl); K7(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"476.28192"	"1426.83121"	"1426.83060"	"0.43"	"0.00020"	"7/70"	"7"	"70"	"4899077.79711914"	"HCD"	"MS2"	"12.48511"	"193.9"	"100.000"	"36.6758"	"9914"	"9914"	"9896"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"279.4"	""	"268.3"	"2.6"	"277.6"	""	"303.4"	""	"342.7"	"365.9"	""	"561"	"14"	"34.000"	"27.000"	"1.19655555023847"	"22"	"0.0006732"	"0.008951"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDAEAPPEK"	"[K].iDAEAPPEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41682"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2"	"P41682"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"714.41052"	"1427.81377"	"1427.81462"	"-0.59"	"-0.00042"	"10/76"	"10"	"76"	"273255.791564941"	"HCD"	"MS2"	"0"	"20.6"	"100.000"	"52.4634"	"16331"	"16331"	"16300"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.3"	""	"22.1"	""	"23.6"	""	"35.5"	""	"44.8"	"42.4"	""	"697"	"25"	"35.000"	"28.000"	"0.103086734459321"	"21"	"0.001465"	"0.01827"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEELPAEPK"	"[K].gEELPAEPk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"714.41071"	"1427.81413"	"1427.81462"	"-0.34"	"-0.00024"	"7/74"	"7"	"74"	"1043053.24285889"	"HCD"	"MS2"	"0"	"73.3"	"100.000"	"50.0119"	"15343"	"15343"	"15318"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"110.9"	""	"89.1"	""	"89.3"	""	"118.9"	""	"146.6"	"141.4"	""	"683"	"42"	"35.000"	"28.000"	"0.00194711098983875"	"23"	"0"	"0.0008374"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDAEAPPEK"	"[K].iDAEAPPEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41682"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2"	"P41682"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"714.41083"	"1427.81438"	"1427.81462"	"-0.17"	"-0.00012"	"9/76"	"9"	"76"	"251561.898071289"	"HCD"	"MS2"	"0"	"20.8"	"100.000"	"52.1865"	"16229"	"16229"	"16204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.5"	""	"18.0"	""	"27.9"	""	"33.2"	""	"45.8"	"47.0"	""	"685"	"23"	"35.000"	"28.000"	"0.165829035897554"	"19"	"0.001812"	"0.02041"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEELPAEPK"	"[K].gEELPAEPk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"714.41162"	"1427.81597"	"1427.81462"	"0.95"	"0.00067"	"8/74"	"8"	"74"	"1436839.85955811"	"HCD"	"MS2"	"0"	"96.4"	"100.000"	"50.4570"	"15513"	"15513"	"15486"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"131.1"	""	"112.2"	""	"130.1"	""	"158.1"	""	"193.0"	"197.1"	""	"695"	"36"	"35.000"	"28.000"	"0.00948319779525793"	"23"	"0"	"0.0006641"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHDNEITK"	"[R].lHDNEITk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q01129"	"Decorin OS=Rattus norvegicus OX=10116 GN=Dcn PE=1 SV=1"	"Q01129"	"Decorin OS=Rattus norvegicus OX=10116 GN=Dcn PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"476.61313"	"1427.82483"	"1427.82585"	"-0.71"	"-0.00034"	"5/72"	"5"	"72"	"3604445.12713623"	"HCD"	"MS2"	"45.99994"	"133.9"	"100.000"	"38.7075"	"10743"	"10743"	"10720"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"126.5"	""	"104.6"	""	"117.2"	""	"281.7"	"0.4"	"316.5"	"329.0"	""	"705"	"18"	"35.000"	"28.000"	"0.553552888527577"	"16"	"0.002937"	"0.0274"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHDNEITK"	"[R].lHDNEITk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q01129"	"Decorin OS=Rattus norvegicus OX=10116 GN=Dcn PE=1 SV=1"	"Q01129"	"Decorin OS=Rattus norvegicus OX=10116 GN=Dcn PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"476.61319"	"1427.82502"	"1427.82585"	"-0.58"	"-0.00028"	"5/72"	"5"	"72"	"3498929.4039917"	"HCD"	"MS2"	"47.91467"	"136.4"	"100.000"	"38.9339"	"10826"	"10826"	"10805"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"134.4"	"2.1"	"111.7"	""	"117.3"	""	"286.8"	"0.9"	"322.4"	"323.8"	""	"700"	"15"	"35.000"	"28.000"	"1.09665000351046"	"16"	"0.002547"	"0.02541"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGPPVSELITK"	"[K].ASGPPVSELITk.[A]"	"K12(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"714.41846"	"1427.82964"	"1427.83071"	"-0.75"	"-0.00054"	"7/106"	"7"	"106"	"153853.133117676"	"HCD"	"MS2"	"23.18733"	"10.6"	"100.000"	"71.9119"	"24221"	"24221"	"24198"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.6"	""	"15.2"	""	"17.2"	""	"16.7"	""	"20.0"	"13.6"	""	"648"	"59"	"35.000"	"28.000"	"3.93137987550653E-05"	"23"	"0.0001301"	"0.003891"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGPPVSELITK"	"[K].ASGPPVSELITk.[A]"	"K12(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"714.41925"	"1427.83122"	"1427.83071"	"0.36"	"0.00026"	"7/106"	"7"	"106"	"138966.657714844"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"72.0494"	"24264"	"24264"	"24234"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.3"	""	"10.3"	""	"14.2"	""	"15.1"	""	"18.7"	"17.4"	""	"646"	"52"	"35.000"	"28.000"	"0.000182474642864374"	"21"	"0.003111"	"0.03143"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETQALVLAPTR"	"[K].eTQALVLAPTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"476.61847"	"1427.84085"	"1427.84194"	"-0.76"	"-0.00036"	"12/114"	"12"	"114"	"1000614.23077393"	"HCD"	"MS2"	"38.77926"	"23.8"	"100.000"	"61.7081"	"20077"	"20077"	"20049"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.3"	""	"31.8"	"2.1"	"32.5"	""	"42.6"	""	"41.8"	"44.8"	""	"609"	"33"	"34.000"	"27.000"	"0.0151212361881627"	"21"	"0"	"0.0001179"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETQALVLAPTR"	"[K].eTQALVLAPTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"714.42438"	"1427.84148"	"1427.84194"	"-0.33"	"-0.00023"	"8/114"	"8"	"114"	"2096739.21520996"	"HCD"	"MS2"	"18.90364"	"95.8"	"100.000"	"61.6532"	"20054"	"20054"	"20033"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"144.1"	""	"140.0"	""	"137.5"	""	"148.0"	""	"169.9"	"169.6"	""	"605"	"66"	"34.000"	"27.000"	"7.35741712744829E-06"	"27"	"0"	"1.293E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETQALVLAPTR"	"[K].eTQALVLAPTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8769"	"0.0000"	"1"	"1"	"1"	"714.42444"	"1427.84160"	"1427.84194"	"-0.24"	"-0.00017"	"8/114"	"8"	"114"	"1956495.894104"	"HCD"	"MS2"	"26.5198"	"90.1"	"100.000"	"61.7630"	"20083"	"20083"	"20065"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"119.3"	""	"144.3"	""	"134.7"	""	"146.8"	""	"144.7"	"163.9"	""	"603"	"65"	"34.000"	"27.000"	"8.6953549819267E-06"	"24"	"0"	"3.565E-05"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSSNYDPFR"	"[R].vDSSNYDPFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"714.85089"	"1428.69451"	"1428.69567"	"-0.82"	"-0.00058"	"7/92"	"7"	"92"	"461912.45690918"	"HCD"	"MS2"	"21.14167"	"26.5"	"100.000"	"71.5015"	"24055"	"24055"	"24026"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.1"	""	"31.6"	""	"35.4"	""	"50.2"	""	"37.3"	"52.9"	""	"451"	"43"	"33.000"	"26.000"	"0.00114063461281702"	"19"	"0"	"0.0004036"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSSNYDPFR"	"[R].vDSSNYDPFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"714.85107"	"1428.69487"	"1428.69567"	"-0.56"	"-0.00040"	"10/92"	"10"	"92"	"256365.782409668"	"HCD"	"MS2"	"47.79916"	"15.9"	"100.000"	"71.9272"	"24214"	"24214"	"24193"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.8"	""	"16.2"	""	"27.0"	""	"30.9"	""	"29.1"	"23.1"	""	"447"	"12"	"33.000"	"26.000"	"1.41996463268865"	"18"	"0.001886"	"0.02193"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSSNYDPFR"	"[R].vDSSNYDPFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"714.85150"	"1428.69573"	"1428.69567"	"0.04"	"0.00003"	"7/92"	"7"	"92"	"443337.180786133"	"HCD"	"MS2"	"10.77605"	"23.1"	"100.000"	"71.6022"	"24082"	"24082"	"24056"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.9"	""	"29.9"	""	"31.7"	""	"40.4"	"1.0"	"38.7"	"38.7"	""	"465"	"43"	"33.000"	"26.000"	"0.00130744358106756"	"16"	"0"	"0.0009227"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSSNYDPFR"	"[R].vDSSNYDPFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"714.85162"	"1428.69597"	"1428.69567"	"0.21"	"0.00015"	"5/92"	"5"	"92"	"240745.225646973"	"HCD"	"MS2"	"58.37988"	"13.0"	"100.000"	"71.8380"	"24191"	"24191"	"24168"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.2"	""	"16.0"	""	"22.5"	""	"20.7"	""	"22.6"	"24.7"	""	"465"	"3"	"33.000"	"26.000"	"11.1281496465013"	"13"	"0.008668"	"0.1116"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSNAMEYK"	"[K].qSNAMEYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"714.88135"	"1428.75542"	"1428.75572"	"-0.21"	"-0.00015"	"6/78"	"6"	"78"	"730686.30255127"	"HCD"	"MS2"	"23.10914"	"72.2"	"100.000"	"40.8924"	"11624"	"11624"	"11598"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"98.2"	""	"76.7"	""	"79.8"	""	"101.8"	""	"176.0"	"160.5"	""	"677"	"6"	"35.000"	"28.000"	"9.1739986739505"	"16"	"0.00736"	"0.08663"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSNAMEYK"	"[K].qSNAMEYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"714.88232"	"1428.75737"	"1428.75572"	"1.16"	"0.00083"	"10/78"	"10"	"78"	"761783.231811523"	"HCD"	"MS2"	"21.39927"	"74.9"	"100.000"	"40.7103"	"11560"	"11560"	"11535"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.0"	""	"76.9"	""	"86.7"	""	"123.6"	""	"172.4"	"168.2"	""	"681"	"13"	"35.000"	"28.000"	"1.76245126279168"	"15"	"0.008478"	"0.1037"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESETDYVK"	"[R].eSETDYVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P23680"	"Serum amyloid P-component OS=Rattus norvegicus OX=10116 GN=Apcs PE=2 SV=2"	"P23680"	"Serum amyloid P-component OS=Rattus norvegicus OX=10116 GN=Apcs PE=2 SV=2"	"0"	"2"	"2"	"0.1765"	"0.0000"	"1"	"1"	"1"	"714.88446"	"1428.76164"	"1428.76225"	"-0.42"	"-0.00030"	"11/64"	"11"	"64"	"456517.253234863"	"HCD"	"MS2"	"0"	"44.0"	"100.000"	"43.2773"	"12606"	"12606"	"12575"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.6"	""	"53.5"	""	"50.1"	""	"84.3"	"0.2"	"77.6"	"101.8"	""	"707"	"17"	"35.000"	"28.000"	"0.69564780341137"	"27"	"0.005427"	"0.0625"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ESETDYVK"	"[R].eSETDYVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P23680"	"Serum amyloid P-component OS=Rattus norvegicus OX=10116 GN=Apcs PE=2 SV=2"	"P23680"	"Serum amyloid P-component OS=Rattus norvegicus OX=10116 GN=Apcs PE=2 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"714.88507"	"1428.76286"	"1428.76225"	"0.43"	"0.00031"	"8/64"	"8"	"64"	"462946.043334961"	"HCD"	"MS2"	"30.86202"	"39.9"	"100.000"	"43.4088"	"12649"	"12649"	"12618"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.9"	""	"49.6"	""	"42.1"	""	"73.7"	"1.1"	"77.2"	"82.9"	""	"717"	"25"	"35.000"	"28.000"	"0.117351639114064"	"25"	"0"	"0.003579"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGTPELSPTER"	"[R].lGTPELSPTER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"714.89673"	"1428.78618"	"1428.78957"	"-2.38"	"-0.00170"	"8/94"	"8"	"94"	"1002946.12365723"	"HCD"	"MS2"	"100"	"57.0"	"100.000"	"59.7962"	"19316"	"19316"	"19302"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.6"	""	"66.4"	""	"75.0"	""	"95.1"	"0.4"	"93.4"	"121.6"	""	"791"	"29"	"35.000"	"28.000"	"0.0493340179883084"	"21"	"0.006639"	"0.07407"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGTPELSPTER"	"[R].lGTPELSPTER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"714.89758"	"1428.78789"	"1428.78957"	"-1.18"	"-0.00084"	"8/94"	"8"	"94"	"1344079.17987061"	"HCD"	"MS2"	"0"	"71.7"	"100.000"	"59.5319"	"19223"	"19223"	"19206"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.3"	""	"83.4"	""	"91.5"	""	"117.6"	""	"130.0"	"162.6"	""	"781"	"33"	"35.000"	"28.000"	"0.0205409742525571"	"19"	"0.001635"	"0.01972"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEERPSLR"	"[R].aLEEERPSLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"0"	"3"	"3"	"0.4815"	"0.0000"	"1"	"1"	"1"	"476.93762"	"1428.79831"	"1428.80081"	"-1.75"	"-0.00083"	"7/90"	"7"	"90"	"5382808.97839355"	"HCD"	"MS2"	"8.345397"	"143.4"	"100.000"	"38.3049"	"10579"	"10579"	"10552"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"217.8"	""	"182.6"	""	"176.2"	""	"244.3"	""	"268.6"	"272.3"	""	"772"	"27"	"35.000"	"28.000"	"0.0754375029929303"	"28"	"0"	"0.0005575"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEERPSLR"	"[R].aLEEERPSLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"0"	"3"	"3"	"0.1538"	"0.0000"	"1"	"1"	"1"	"476.93805"	"1428.79959"	"1428.80081"	"-0.85"	"-0.00040"	"8/90"	"8"	"90"	"4269343.18939209"	"HCD"	"MS2"	"17.00284"	"129.1"	"100.000"	"38.5151"	"10656"	"10656"	"10631"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"192.4"	""	"157.0"	""	"170.9"	""	"212.8"	""	"248.2"	"243.2"	""	"781"	"26"	"35.000"	"28.000"	"0.0888425546716494"	""	"0"	"0.0008366"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEERPSLR"	"[R].aLEEERPSLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"476.93817"	"1428.79996"	"1428.80081"	"-0.59"	"-0.00028"	"6/90"	"6"	"90"	"4552876.26153564"	"HCD"	"MS2"	"45.93824"	"171.7"	"100.000"	"38.6248"	"10709"	"10709"	"10688"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"175.6"	""	"164.2"	""	"167.3"	""	"361.2"	""	"391.9"	"387.8"	""	"784"	"5"	"35.000"	"28.000"	"13.7811692687093"	"16"	"0.0003538"	"0.006761"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEERPSLR"	"[R].aLEEERPSLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"476.93823"	"1428.80014"	"1428.80081"	"-0.46"	"-0.00022"	"10/90"	"10"	"90"	"5380416.84368896"	"HCD"	"MS2"	"29.99352"	"193.9"	"100.000"	"38.8095"	"10775"	"10775"	"10757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"234.7"	""	"180.4"	""	"192.7"	""	"391.8"	""	"408.9"	"440.1"	""	"784"	"5"	"35.000"	"28.000"	"12.1979280414556"	"14"	"0.0001301"	"0.004024"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"TDAPQPDVK"	"[K].tDAPQPDVk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"4"	"714.90790"	"1428.80852"	"1428.80987"	"-0.94"	"-0.00067"	"8/84"	"8"	"84"	"482471.063659668"	"HCD"	"MS2"	"38.22708"	"47.2"	"100.000"	"40.5929"	"11512"	"11512"	"11491"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.7"	""	"43.1"	""	"58.1"	""	"66.9"	""	"117.3"	"98.6"	""	"740"	"12"	"35.000"	"28.000"	"2.43894341240399"	"15"	"0.004069"	"0.04489"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAPQPDVK"	"[K].tDAPQPDVk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"714.90808"	"1428.80889"	"1428.80987"	"-0.69"	"-0.00049"	"5/84"	"5"	"84"	"637054.525817871"	"HCD"	"MS2"	"47.94699"	"63.0"	"100.000"	"40.8165"	"11593"	"11593"	"11573"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.4"	""	"57.6"	""	"74.7"	""	"94.7"	""	"139.1"	"143.4"	""	"796"	"17"	"35.000"	"29.000"	"0.77425331248582"	"21"	"0.007018"	"0.08135"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEEANDLLR"	"[K].qLEEANDLLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.8103"	"0.0000"	"1"	"1"	"1"	"715.39532"	"1429.78337"	"1429.78482"	"-1.01"	"-0.00073"	"8/98"	"8"	"98"	"298699.474731445"	"HCD"	"MS2"	"0"	"17.8"	"100.000"	"71.2271"	"23943"	"23943"	"23921"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.0"	""	"17.5"	""	"18.1"	""	"27.5"	""	"36.9"	"40.4"	""	"769"	"58"	"35.000"	"28.000"	"6.7281605177618E-05"	"27"	"0"	"0.0001652"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEEANDLLR"	"[K].qLEEANDLLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"715.39545"	"1429.78362"	"1429.78482"	"-0.84"	"-0.00060"	"8/98"	"8"	"98"	"340083.875366211"	"HCD"	"MS2"	"0"	"19.8"	"100.000"	"71.0863"	"23872"	"23872"	"23845"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.9"	""	"24.2"	""	"25.6"	""	"27.8"	""	"40.1"	"40.0"	""	"777"	"54"	"35.000"	"28.000"	"0.000166491100174405"	"25"	"0"	"0.0002463"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENTELTQPLR"	"[R].eNTELTQPLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"715.39612"	"1429.78496"	"1429.78482"	"0.10"	"0.00007"	"8/98"	"8"	"98"	"385389.301513672"	"HCD"	"MS2"	"100"	"30.7"	"100.000"	"47.8732"	"14471"	"14471"	"14448"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.3"	""	"41.7"	""	"33.9"	""	"50.5"	"0.0"	"64.6"	"56.9"	""	"770"	"23"	"35.000"	"28.000"	"0.196997506683018"	"23"	"0"	"0.003445"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEEANDLLR"	"[K].qLEEANDLLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"715.39642"	"1429.78557"	"1429.78482"	"0.52"	"0.00037"	"6/98"	"6"	"98"	"186491.029541016"	"HCD"	"MS2"	"0"	"13.7"	"100.000"	"71.4154"	"24006"	"24006"	"23986"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.5"	""	"13.9"	""	"15.7"	""	"24.2"	""	"27.4"	"26.7"	""	"771"	"21"	"35.000"	"28.000"	"0.303406151927461"	"21"	"0.001546"	"0.0186"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENTELTQPLR"	"[R].eNTELTQPLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"715.39673"	"1429.78618"	"1429.78482"	"0.95"	"0.00068"	"5/98"	"5"	"98"	"325674.56817627"	"HCD"	"MS2"	"100"	"24.3"	"100.000"	"48.2222"	"14601"	"14601"	"14574"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.6"	""	"24.2"	""	"31.0"	""	"43.5"	""	"51.5"	"50.9"	""	"775"	"26"	"35.000"	"28.000"	"0.0877549669192311"	"23"	"0"	"0.0009669"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEEANDLLR"	"[K].qLEEANDLLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"715.39679"	"1429.78630"	"1429.78482"	"1.03"	"0.00074"	"8/98"	"8"	"98"	"266669.828063965"	"HCD"	"MS2"	"0"	"16.9"	"100.000"	"70.9325"	"23823"	"23823"	"23793"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.0"	""	"16.6"	""	"22.4"	""	"25.6"	""	"36.2"	"35.3"	""	"779"	"62"	"35.000"	"28.000"	"2.28827102810348E-05"	"28"	"0"	"8.644E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NENDAIPAK"	"[K].nENDAIPAk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"715.40527"	"1429.80327"	"1429.80511"	"-1.29"	"-0.00092"	"9/84"	"9"	"84"	"367651.42010498"	"HCD"	"MS2"	"0"	"31.2"	"100.000"	"43.0179"	"12489"	"12489"	"12460"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.4"	""	"30.1"	""	"35.8"	""	"60.4"	"1.5"	"62.4"	"67.5"	""	"752"	"28"	"35.000"	"28.000"	"0.0559999765219304"	""	"0.0001301"	"0.004678"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NENDAIPAK"	"[K].nENDAIPAk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"715.40540"	"1429.80351"	"1429.80511"	"-1.12"	"-0.00080"	"6/84"	"6"	"84"	"401743.109680176"	"HCD"	"MS2"	"22.7697"	"31.2"	"100.000"	"42.8566"	"12434"	"12434"	"12403"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.8"	""	"35.2"	""	"46.0"	""	"52.1"	""	"55.2"	"66.1"	""	"745"	"26"	"35.000"	"28.000"	"0.100259671446278"	"23"	"0.0002479"	"0.005135"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEQVPQNK"	"[K].eEQVPQNk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.1304"	"0.0000"	"1"	"1"	"3"	"715.40588"	"1429.80449"	"1429.80511"	"-0.44"	"-0.00031"	"10/68"	"10"	"68"	"907203.512817383"	"HCD"	"MS2"	"0"	"70.3"	"100.000"	"33.1404"	"8483"	"8483"	"8452"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"130.2"	""	"71.8"	""	"84.6"	""	"114.9"	""	"130.5"	"139.2"	""	"795"	"23"	"35.000"	"29.000"	"0.19201587381081"	""	"0.000936"	"0.0125"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEQVPQNK"	"[K].eEQVPQNk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"477.27307"	"1429.80466"	"1429.80511"	"-0.32"	"-0.00015"	"8/68"	"8"	"68"	"4404434.10980225"	"HCD"	"MS2"	"10.30618"	"145.2"	"100.000"	"33.3563"	"8577"	"8577"	"8557"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"233.9"	""	"164.0"	""	"169.6"	""	"241.7"	"0.8"	"285.2"	"281.7"	""	"795"	"24"	"35.000"	"29.000"	"0.151473664799025"	"24"	"0.006769"	"0.07781"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEQVPQNK"	"[K].eEQVPQNk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.5333"	"0.0000"	"1"	"1"	"1"	"477.27322"	"1429.80512"	"1429.80511"	"0.00"	"0.00000"	"8/68"	"8"	"68"	"4431989.91265869"	"HCD"	"MS2"	"13.29817"	"138.5"	"100.000"	"33.3631"	"8573"	"8573"	"8554"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"232.0"	""	"130.1"	""	"164.2"	""	"223.0"	""	"276.2"	"290.1"	""	"786"	"30"	"35.000"	"28.000"	"0.0414374050281765"	"28"	"0.004817"	"0.05112"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEQVPQNK"	"[K].eEQVPQNk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"3"	"715.40649"	"1429.80571"	"1429.80511"	"0.42"	"0.00030"	"10/68"	"10"	"68"	"1517795.41027832"	"HCD"	"MS2"	"29.46667"	"110.4"	"100.000"	"33.1726"	"8503"	"8503"	"8475"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"219.2"	""	"109.7"	""	"112.1"	""	"191.4"	""	"205.4"	"209.8"	""	"783"	"24"	"35.000"	"28.000"	"0.163957680743665"	"24"	"0.0006732"	"0.009046"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEQVPQNK"	"[K].eEQVPQNk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"715.40656"	"1429.80583"	"1429.80511"	"0.50"	"0.00036"	"5/68"	"5"	"68"	"1040156.72955322"	"HCD"	"MS2"	"15.78237"	"79.3"	"100.000"	"33.4617"	"8613"	"8613"	"8592"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"131.5"	""	"98.8"	""	"98.4"	""	"123.4"	""	"142.4"	"158.1"	""	"783"	"17"	"35.000"	"28.000"	"0.801183075277709"	"21"	"0.008641"	"0.1076"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSVEADINGLR"	"[R].qSVEADINGLR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFV4; Q6IFW6"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"2"	"2"	"0.6301"	"0.0000"	"1"	"1"	"1"	"715.89008"	"1430.77287"	"1430.78007"	"-5.03"	"-0.00360"	"9/108"	"9"	"108"	"668157.333374023"	"HCD"	"MS2"	"0"	"42.1"	"100.000"	"62.0769"	"20209"	"20209"	"20195"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.0"	""	"56.4"	""	"56.8"	""	"73.1"	""	"61.7"	"61.6"	""	"835"	"73"	"36.000"	"29.000"	"2.2421077498458E-06"	""	"0"	"4.455E-06"	"0.979"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSVEADINGLR"	"[R].qSVEADINGLR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFV4; Q6IFW6"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"2"	"2"	"0.6447"	"0.0000"	"1"	"1"	"1"	"715.89050"	"1430.77373"	"1430.78007"	"-4.43"	"-0.00317"	"9/108"	"9"	"108"	"800709.033874512"	"HCD"	"MS2"	"0"	"46.9"	"100.000"	"61.9876"	"20188"	"20188"	"20171"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.7"	""	"62.1"	""	"68.5"	""	"80.1"	"1.3"	"75.1"	"65.3"	""	"826"	"76"	"36.000"	"29.000"	"1.14274689955495E-06"	""	"0"	"3.356E-06"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSVEADINGLR"	"[R].qSVEADINGLR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFV4; Q6IFW6"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"715.89099"	"1430.77471"	"1430.78007"	"-3.75"	"-0.00268"	"8/108"	"8"	"108"	"400217.221191406"	"HCD"	"MS2"	"0"	"29.9"	"100.000"	"62.3633"	"20322"	"20322"	"20305"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.5"	""	"38.9"	""	"39.5"	""	"52.1"	""	"49.2"	"52.9"	""	"821"	"54"	"36.000"	"29.000"	"0.000182521135296069"	""	"0"	"2.665E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEATLVVGGDGR"	"[R].qEATLVVGGDGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.8305"	"0.0000"	"1"	"1"	"1"	"715.89282"	"1430.77837"	"1430.78007"	"-1.19"	"-0.00085"	"8/126"	"8"	"126"	"759840.779052734"	"HCD"	"MS2"	"0"	"40.5"	"100.000"	"46.9367"	"14077"	"14077"	"14057"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.5"	""	"50.0"	""	"65.6"	""	"61.4"	""	"62.9"	"90.3"	""	"899"	"59"	"36.000"	"29.000"	"6.19055656267829E-05"	"26"	"0"	"5.067E-05"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEATLVVGGDGR"	"[R].qEATLVVGGDGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.8036"	"0.0000"	"1"	"1"	"1"	"715.89282"	"1430.77837"	"1430.78007"	"-1.19"	"-0.00085"	"9/126"	"9"	"126"	"706191.13684082"	"HCD"	"MS2"	"0"	"42.8"	"100.000"	"46.6064"	"13954"	"13954"	"13942"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.3"	""	"56.9"	""	"63.3"	""	"66.2"	""	"70.8"	"95.8"	""	"899"	"56"	"36.000"	"29.000"	"0.000119050081230371"	"27"	"0"	"2.297E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIIDSNIGEQR"	"[K].gIIDSNIGEQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"715.89282"	"1430.77837"	"1430.78007"	"-1.19"	"-0.00085"	"9/100"	"9"	"100"	"868970.343566895"	"HCD"	"MS2"	"0"	"50.4"	"100.000"	"54.9479"	"17340"	"17340"	"17323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.0"	""	"55.7"	""	"62.1"	""	"91.2"	""	"101.2"	"96.7"	""	"899"	"56"	"36.000"	"29.000"	"0.000125236146529908"	"24"	"0"	"7.309E-06"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIIDSNIGEQR"	"[K].gIIDSNIGEQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"715.89319"	"1430.77910"	"1430.78007"	"-0.68"	"-0.00049"	"9/100"	"9"	"100"	"415973.213684082"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"55.0439"	"17392"	"17392"	"17368"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.7"	""	"34.5"	""	"30.5"	""	"42.5"	""	"53.6"	"58.9"	""	"891"	"49"	"36.000"	"29.000"	"0.000503324079986732"	"26"	"0"	"4.659E-05"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIIDSNIGEQR"	"[K].gIIDSNIGEQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"715.89325"	"1430.77922"	"1430.78007"	"-0.59"	"-0.00043"	"10/100"	"10"	"100"	"378093.424804688"	"HCD"	"MS2"	"0"	"25.4"	"100.000"	"55.2783"	"17474"	"17474"	"17447"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.4"	""	"27.0"	""	"31.2"	""	"46.6"	""	"53.6"	"56.7"	""	"897"	"50"	"36.000"	"29.000"	"0.000445412547716788"	"27"	"0"	"3.39E-05"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEATLVVGGDGR"	"[R].qEATLVVGGDGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.7797"	"0.0000"	"1"	"1"	"1"	"715.89337"	"1430.77947"	"1430.78007"	"-0.42"	"-0.00030"	"7/126"	"7"	"126"	"404258.250915527"	"HCD"	"MS2"	"0"	"27.3"	"100.000"	"46.9441"	"14092"	"14092"	"14062"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.3"	""	"36.3"	""	"36.5"	""	"43.5"	"2.4"	"46.4"	"53.0"	""	"897"	"59"	"36.000"	"29.000"	"5.12580933153212E-05"	""	"0"	"8.397E-05"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIIDSNIGEQR"	"[K].gIIDSNIGEQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.8036"	"0.0000"	"1"	"1"	"1"	"715.89435"	"1430.78142"	"1430.78007"	"0.94"	"0.00067"	"9/100"	"9"	"100"	"969306.986938477"	"HCD"	"MS2"	"0"	"53.0"	"100.000"	"54.7175"	"17259"	"17259"	"17239"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.3"	""	"59.9"	""	"63.6"	""	"89.6"	"1.4"	"104.1"	"109.0"	""	"882"	"56"	"36.000"	"29.000"	"0.000112574127447361"	"27"	"0"	"1.133E-05"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPEDAADMAR"	"[R].nIPEDAADMAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"716.35858"	"1431.70989"	"1431.70994"	"-0.04"	"-0.00003"	"10/108"	"10"	"108"	"1282600.24725342"	"HCD"	"MS2"	"16.242"	"58.3"	"100.000"	"56.3793"	"17923"	"17923"	"17899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"100.3"	""	"64.3"	""	"83.8"	""	"69.2"	""	"118.4"	"117.4"	""	"550"	"56"	"34.000"	"27.000"	"6.5513785407364E-05"	"26"	"0"	"5.662E-05"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPEDAADMAR"	"[R].nIPEDAADMAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"716.35864"	"1431.71001"	"1431.70994"	"0.04"	"0.00003"	"10/108"	"10"	"108"	"1214556.64801025"	"HCD"	"MS2"	"26.52722"	"56.6"	"100.000"	"56.1952"	"17862"	"17862"	"17837"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"102.2"	""	"66.8"	""	"72.6"	""	"71.4"	"1.4"	"107.9"	"114.1"	""	"550"	"52"	"34.000"	"27.000"	"0.000193790593965965"	""	"0"	"1.888E-06"	"1.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"716.40234"	"1431.79741"	"1431.79963"	"-1.55"	"-0.00111"	"7/68"	"7"	"68"	"612319.970275879"	"HCD"	"MS2"	"0"	"48.0"	"100.000"	"44.7133"	"13184"	"13184"	"13157"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.7"	""	"59.3"	""	"51.6"	""	"75.8"	""	"107.3"	"96.7"	""	"958"	"41"	"36.000"	"29.000"	"0.00413366724380379"	"20"	"0.0008629"	"0.01008"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHGAFDAVK"	"[R].eHGAFDAVk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"477.93735"	"1431.79749"	"1431.79963"	"-1.50"	"-0.00072"	"13/74"	"13"	"74"	"4417964.97662354"	"HCD"	"MS2"	"10.93531"	"126.4"	"100.000"	"40.7747"	"11586"	"11586"	"11562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"189.6"	""	"168.0"	""	"177.1"	""	"211.0"	""	"230.6"	"223.5"	""	"957"	"44"	"36.000"	"29.000"	"0.00182339996493921"	"23"	"0"	"0.0001943"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"477.93756"	"1431.79813"	"1431.79963"	"-1.05"	"-0.00050"	"7/68"	"7"	"68"	"12495995.6934204"	"HCD"	"MS2"	"9.074292"	"349.8"	"78.024"	"45.1234"	"13340"	"13340"	"13323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"505.4"	""	"396.4"	""	"397.4"	""	"530.2"	""	"754.4"	"742.5"	""	"941"	"37"	"36.000"	"29.000"	"0.00998986519371105"	"24"	"0"	"0.001758"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"477.93756"	"1431.79813"	"1431.79963"	"-1.05"	"-0.00050"	"7/68"	"7"	"68"	"21819146.3700562"	"HCD"	"MS2"	"17.05828"	"722.0"	"90.824"	"44.6788"	"13170"	"13170"	"13157"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1068.0"	""	"930.5"	""	"801.3"	""	"1190.5"	""	"1538.3"	"1324.9"	""	"941"	"37"	"36.000"	"29.000"	"0.0102225590465539"	"24"	"0"	"0.002153"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"477.93762"	"1431.79831"	"1431.79963"	"-0.92"	"-0.00044"	"7/68"	"7"	"68"	"22249659.9213867"	"HCD"	"MS2"	"16.34735"	"697.2"	"82.224"	"44.8219"	"13217"	"13217"	"13200"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1040.8"	""	"886.5"	""	"785.0"	""	"1145.2"	""	"1455.6"	"1307.0"	""	"941"	"37"	"36.000"	"29.000"	"0.0104606730355149"	"23"	"0"	"0.001051"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHGAFDAVK"	"[R].eHGAFDAVk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"477.93768"	"1431.79850"	"1431.79963"	"-0.80"	"-0.00038"	"12/74"	"12"	"74"	"4426787.29962158"	"HCD"	"MS2"	"20.45078"	"124.7"	"100.000"	"40.9636"	"11653"	"11653"	"11630"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"184.0"	""	"150.2"	""	"182.7"	""	"186.3"	""	"245.2"	"234.5"	""	"962"	"40"	"36.000"	"29.000"	"0.00520169730574309"	"22"	"0"	"0.0002653"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"477.93768"	"1431.79850"	"1431.79963"	"-0.80"	"-0.00038"	"6/68"	"6"	"68"	"15496516.2506104"	"HCD"	"MS2"	"7.52646"	"286.2"	"47.167"	"44.9737"	"13290"	"13290"	"13273"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"405.6"	""	"339.1"	""	"332.5"	""	"453.0"	""	"616.5"	"573.3"	""	"962"	"27"	"36.000"	"29.000"	"0.0881343237160553"	"22"	"0.0003538"	"0.00715"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"716.40320"	"1431.79912"	"1431.79963"	"-0.36"	"-0.00026"	"12/68"	"12"	"68"	"661406.043579102"	"HCD"	"MS2"	"0"	"56.2"	"100.000"	"44.8862"	"13243"	"13243"	"13216"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"73.5"	""	"62.7"	""	"70.1"	""	"92.5"	"2.5"	"124.7"	"108.3"	""	"949"	"34"	"36.000"	"29.000"	"0.0183331130612156"	"21"	"0"	"0.00343"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEALEAK"	"[R].aLEEALEAk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"Q63862; Q9JLT0"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3;Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"Q63862; Q9JLT0"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3; Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"716.42596"	"1431.84465"	"1431.84592"	"-0.88"	"-0.00063"	"7/72"	"7"	"72"	"219726.512695313"	"HCD"	"MS2"	"57.57405"	"17.3"	"100.000"	"81.8378"	"28224"	"28224"	"28204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.0"	""	"10.2"	""	"10.0"	""	"49.2"	""	"49.8"	"37.0"	""	"876"	"37"	"36.000"	"29.000"	"0.00936427395201977"	"21"	"0"	"0.002669"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEALEAK"	"[R].aLEEALEAk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"Q63862; Q9JLT0"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3;Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"Q63862; Q9JLT0"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3; Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"716.42603"	"1431.84477"	"1431.84592"	"-0.80"	"-0.00057"	"7/72"	"7"	"72"	"219736.260437012"	"HCD"	"MS2"	"53.19856"	"18.3"	"100.000"	"81.7725"	"28195"	"28195"	"28178"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.6"	""	"11.0"	""	"13.1"	""	"53.3"	""	"46.5"	"39.6"	""	"876"	"30"	"36.000"	"29.000"	"0.0405017800184942"	"18"	"0"	"0.0005172"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFEDIHHYR"	"[K].sFEDIHHYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P08644"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3"	"P08644"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3"	"0"	"4"	"4"	"0.3846"	"0.0000"	"1"	"1"	"1"	"358.93420"	"1432.71499"	"1432.71708"	"-1.46"	"-0.00052"	"6/70"	"6"	"70"	"5208958.41174316"	"HCD"	"MS2"	"27.1429"	"106.7"	"100.000"	"33.6066"	"8671"	"8671"	"8653"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"141.2"	""	"148.6"	""	"135.9"	""	"183.0"	""	"201.8"	"201.4"	""	"600"	"26"	"34.000"	"27.000"	"0.0680959455565147"	""	"0"	"0.001986"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFEDIHHYR"	"[K].sFEDIHHYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P08644"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3"	"P08644"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"358.93448"	"1432.71609"	"1432.71708"	"-0.69"	"-0.00025"	"8/70"	"8"	"70"	"4742965.72515869"	"HCD"	"MS2"	"41.97945"	"106.6"	"100.000"	"33.5696"	"8663"	"8663"	"8640"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"152.5"	""	"142.6"	""	"129.5"	""	"179.7"	"1.1"	"194.8"	"209.9"	""	"596"	"15"	"34.000"	"27.000"	"0.89169486170924"	"13"	"0.0008629"	"0.01029"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLHDESGLNR"	"[R].yLHDESGLNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"3"	"3"	"0.8222"	"0.0000"	"1"	"1"	"1"	"478.25067"	"1432.73746"	"1432.73821"	"-0.52"	"-0.00025"	"14/78"	"14"	"78"	"15164925.9920044"	"HCD"	"MS2"	"30.32956"	"258.0"	"100.000"	"34.5009"	"9031"	"9031"	"9012"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"259.1"	"2.6"	"255.4"	""	"349.7"	""	"339.7"	""	"597.1"	"663.0"	""	"770"	"45"	"35.000"	"28.000"	"0.00123725930737652"	"24"	"0"	"3.778E-05"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLHDESGLNR"	"[R].yLHDESGLNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"716.87238"	"1432.73747"	"1432.73821"	"-0.51"	"-0.00037"	"6/78"	"6"	"78"	"456632.226623535"	"HCD"	"MS2"	"0"	"26.3"	"100.000"	"34.4306"	"9009"	"9009"	"8983"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.0"	""	"26.8"	""	"32.2"	""	"54.7"	""	"49.3"	"51.4"	""	"770"	"37"	"35.000"	"28.000"	"0.00800683224534922"	"19"	"0"	"0.002385"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLHDESGLNR"	"[R].yLHDESGLNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"716.87262"	"1432.73796"	"1432.73821"	"-0.17"	"-0.00012"	"10/78"	"10"	"78"	"350816.273193359"	"HCD"	"MS2"	"0"	"19.7"	"100.000"	"34.4780"	"9022"	"9022"	"8999"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.8"	""	"21.5"	""	"27.0"	""	"33.7"	""	"39.3"	"37.0"	""	"767"	"32"	"35.000"	"28.000"	"0.0232683382397192"	"21"	"0"	"0.002932"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLHDESGLNR"	"[R].yLHDESGLNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"478.25085"	"1432.73801"	"1432.73821"	"-0.14"	"-0.00007"	"13/78"	"13"	"78"	"16065314.5408325"	"HCD"	"MS2"	"37.69611"	"297.2"	"100.000"	"34.4121"	"9001"	"9001"	"8983"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"268.7"	""	"298.9"	""	"398.7"	""	"405.3"	""	"709.4"	"779.1"	""	"767"	"41"	"35.000"	"28.000"	"0.00306030962567269"	"23"	"0"	"0.0001219"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INDFEEAIPR"	"[K].iNDFEEAIPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P689"	"Protein wntless homolog OS=Rattus norvegicus OX=10116 GN=Wls PE=1 SV=1"	"Q6P689"	"Protein wntless homolog OS=Rattus norvegicus OX=10116 GN=Wls PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"716.88690"	"1432.76653"	"1432.76336"	"2.21"	"0.00158"	"9/94"	"9"	"94"	"163377.790710449"	"HCD"	"MS2"	"39.65314"	"8.3"	"100.000"	"89.4005"	"31185"	"31185"	"31175"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.4"	""	"8.4"	""	"12.1"	""	"15.4"	""	"16.7"	"13.9"	""	"941"	"17"	"36.000"	"29.000"	"1.01288380618782"	"14"	"0.003449"	"0.03402"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEqHFk.[G]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.5625"	"0.0000"	"1"	"1"	"1"	"478.26547"	"1432.78186"	"1432.78365"	"-1.25"	"-0.00060"	"6/68"	"6"	"68"	"1781086.41107178"	"HCD"	"MS2"	"41.42753"	"76.2"	"100.000"	"49.0880"	"14966"	"14966"	"14944"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"121.7"	""	"105.8"	""	"111.6"	""	"112.4"	""	"136.4"	"133.1"	""	"996"	"16"	"36.000"	"29.000"	"1.24517199012482"	"20"	"0.003449"	"0.03321"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHVEEEGK"	"[R].fHVEEEGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"478.26550"	"1432.78196"	"1432.78365"	"-1.18"	"-0.00056"	"6/60"	"6"	"60"	"4209729.14819336"	"HCD"	"MS2"	"2.967886"	"150.6"	"100.000"	"42.3391"	"12222"	"12222"	"12204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"203.2"	""	"162.1"	""	"179.7"	""	"244.4"	""	"318.8"	"325.0"	""	"996"	"36"	"36.000"	"29.000"	"0.0129487946245631"	"20"	"0"	"0.003346"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHVEEEGK"	"[R].fHVEEEGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"478.26559"	"1432.78223"	"1432.78365"	"-0.99"	"-0.00047"	"12/60"	"12"	"60"	"11175886.6234131"	"HCD"	"MS2"	"7.452899"	"366.2"	"100.000"	"42.0289"	"12095"	"12095"	"12076"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"545.8"	"2.9"	"431.0"	""	"434.6"	""	"603.5"	""	"747.8"	"709.6"	""	"993"	"40"	"36.000"	"29.000"	"0.00495358081687898"	"19"	"0"	"0.0003363"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHVEEEGK"	"[R].fHVEEEGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"478.26566"	"1432.78241"	"1432.78365"	"-0.86"	"-0.00041"	"6/60"	"6"	"60"	"3971103.48602295"	"HCD"	"MS2"	"7.916656"	"153.1"	"100.000"	"42.4708"	"12265"	"12265"	"12245"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"212.5"	""	"156.7"	""	"200.8"	""	"245.4"	""	"319.4"	"319.8"	""	"1012"	"40"	"37.000"	"30.000"	"0.0053969763734251"	"21"	"0"	"0.00203"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEqHFk.[G]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"478.26575"	"1432.78269"	"1432.78365"	"-0.67"	"-0.00032"	"7/68"	"7"	"68"	"2837292.08660889"	"HCD"	"MS2"	"10.72364"	"113.0"	"100.000"	"48.7844"	"14843"	"14843"	"14815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"214.9"	""	"177.2"	""	"161.7"	""	"131.5"	""	"203.4"	"180.4"	""	"1009"	"43"	"37.000"	"30.000"	"0.00283701198558531"	"28"	"0"	"0.002095"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHVEEEGK"	"[R].fHVEEEGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"478.26590"	"1432.78315"	"1432.78365"	"-0.35"	"-0.00017"	"11/60"	"11"	"60"	"12986799.1976929"	"HCD"	"MS2"	"4.487711"	"426.9"	"100.000"	"42.1767"	"12146"	"12146"	"12129"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"629.8"	""	"502.2"	""	"535.0"	""	"705.6"	""	"859.6"	"817.8"	""	"992"	"41"	"36.000"	"29.000"	"0.00442060465314338"	"21"	"0"	"0.0009235"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEqHFk.[G]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.5806"	"0.0000"	"1"	"1"	"1"	"478.26602"	"1432.78351"	"1432.78365"	"-0.10"	"-0.00005"	"6/68"	"6"	"68"	"2337806.59368896"	"HCD"	"MS2"	"21.55905"	"98.3"	"100.000"	"49.1838"	"14993"	"14993"	"14966"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"171.6"	""	"161.9"	""	"135.6"	""	"131.7"	""	"173.6"	"156.2"	""	"1000"	"31"	"36.000"	"30.000"	"0.0395339313999913"	"27"	"0"	"0.003495"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TREDLDSLVR"	"[R].tREDLDSLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920P0"	"L-xylulose reductase OS=Rattus norvegicus OX=10116 GN=Dcxr PE=1 SV=1"	"Q920P0"	"L-xylulose reductase OS=Rattus norvegicus OX=10116 GN=Dcxr PE=1 SV=1"	"1"	"3"	"3"	"0.7105"	"0.0000"	"1"	"1"	"1"	"478.26959"	"1432.79422"	"1432.79572"	"-1.05"	"-0.00050"	"8/100"	"8"	"100"	"1476296.29498291"	"HCD"	"MS2"	"0"	"43.2"	"100.000"	"51.4644"	"15934"	"15934"	"15909"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"62.8"	""	"50.3"	""	"60.3"	""	"72.3"	""	"85.9"	"80.4"	""	"1021"	"38"	"37.000"	"30.000"	"0.00881040243860999"	"26"	"0"	"0.0006308"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TREDLDSLVR"	"[R].tREDLDSLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920P0"	"L-xylulose reductase OS=Rattus norvegicus OX=10116 GN=Dcxr PE=1 SV=1"	"Q920P0"	"L-xylulose reductase OS=Rattus norvegicus OX=10116 GN=Dcxr PE=1 SV=1"	"1"	"3"	"3"	"0.6585"	"0.0000"	"1"	"1"	"1"	"478.26959"	"1432.79422"	"1432.79572"	"-1.05"	"-0.00050"	"9/100"	"9"	"100"	"2389837.39068604"	"HCD"	"MS2"	"3.643212"	"57.0"	"100.000"	"51.8656"	"16087"	"16087"	"16059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"84.8"	""	"76.5"	""	"78.8"	""	"91.5"	""	"110.3"	"98.2"	""	"1021"	"41"	"37.000"	"30.000"	"0.00406439348388041"	"29"	"0"	"0.001887"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDNIEAVGK"	"[K].eDNIEAVGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"716.90649"	"1432.80571"	"1432.80478"	"0.65"	"0.00047"	"11/84"	"11"	"84"	"345214.424499512"	"HCD"	"MS2"	"37.04633"	"28.5"	"100.000"	"51.1210"	"15794"	"15794"	"15767"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.1"	""	"32.5"	"2.0"	"36.6"	""	"50.5"	"1.3"	"56.6"	"53.6"	""	"963"	"18"	"36.000"	"29.000"	"0.735523057041632"	"19"	"0.0006732"	"0.009234"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDIMEPK"	"[R].eLDIMEPk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"716.90851"	"1432.80974"	"1432.81217"	"-1.70"	"-0.00122"	"9/66"	"9"	"66"	"274824.242004395"	"HCD"	"MS2"	"42.62405"	"19.4"	"100.000"	"80.7399"	"27781"	"27781"	"27751"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.6"	""	"26.6"	""	"31.6"	""	"20.7"	""	"36.3"	"40.8"	""	"970"	"19"	"36.000"	"29.000"	"0.62480103257117"	"24"	"0.001546"	"0.01863"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDIMEPK"	"[R].eLDIMEPk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"716.91046"	"1432.81365"	"1432.81217"	"1.03"	"0.00074"	"10/66"	"10"	"66"	"246796.575195313"	"HCD"	"MS2"	"25.83271"	"19.6"	"100.000"	"80.7730"	"27795"	"27795"	"27770"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.6"	""	"31.9"	""	"25.7"	""	"27.0"	""	"31.0"	"40.5"	""	"965"	"26"	"36.000"	"29.000"	"0.118712736900123"	"26"	"0.006958"	"0.0803"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDKTNIK"	"[M].vLSADDKTNIK.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"478.27774"	"1432.81867"	"1432.82087"	"-1.54"	"-0.00074"	"6/98"	"6"	"98"	"1963817.77593994"	"HCD"	"MS2"	"17.87727"	"75.8"	"100.000"	"34.1425"	"8886"	"8886"	"8857"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.3"	""	"77.8"	""	"96.9"	""	"128.8"	""	"168.4"	"175.2"	""	"928"	"38"	"36.000"	"29.000"	"0.00743905861280178"	"21"	"0"	"0.0007582"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFGQGAGALVHSE"	"[K].GFGFGQGAGALVHSE.[-]"	""	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"717.34277"	"1433.67827"	"1433.68080"	"-1.77"	"-0.00127"	"4/114"	"4"	"114"	"118220.161865234"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"75.0362"	"25484"	"25484"	"25462"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.7"	""	"7.2"	""	"7.5"	""	"5.0"	""	"9.6"	"10.2"	"NoQuanLabels"	"345"	"3"	"32.000"	"25.000"	"8.12435888034743"	"13"	"0.002711"	"0.02623"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFGQGAGALVHSE"	"[K].GFGFGQGAGALVHSE.[-]"	""	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"717.34314"	"1433.67900"	"1433.68080"	"-1.26"	"-0.00090"	"7/114"	"7"	"114"	"141316.283508301"	"HCD"	"MS2"	"21.75764"	"6.0"	"100.000"	"75.1402"	"25515"	"25515"	"25489"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.4"	""	"10.4"	""	"6.5"	""	"12.0"	""	"9.0"	"10.3"	"NoQuanLabels"	"344"	"7"	"32.000"	"25.000"	"3.38476441829577"	"18"	"0.002379"	"0.02475"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMTMPDIR"	"[K].vPEmTMPDIR.[L]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.4655"	"0.0000"	"1"	"1"	"1"	"717.36920"	"1433.73113"	"1433.73299"	"-1.30"	"-0.00093"	"8/82"	"8"	"82"	"508760.904052734"	"HCD"	"MS2"	"0"	"21.1"	"100.000"	"65.3241"	"21537"	"21537"	"21517"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.3"	""	"23.6"	""	"34.2"	""	"34.5"	""	"44.2"	"37.9"	""	"718"	"58"	"35.000"	"28.000"	"6.04079987924298E-05"	"21"	"0.001886"	"0.02092"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMTMPDIR"	"[K].vPEMTmPDIR.[L]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"717.36932"	"1433.73137"	"1433.73299"	"-1.13"	"-0.00081"	"6/82"	"6"	"82"	"342984.05065918"	"HCD"	"MS2"	"15.95559"	"17.2"	"100.000"	"66.7830"	"22132"	"22132"	"22109"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.2"	""	"23.1"	""	"27.1"	""	"25.9"	"1.6"	"31.1"	"31.7"	""	"718"	"19"	"35.000"	"28.000"	"0.42569098059201"	"17"	"0.009021"	"0.1167"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMTMPDIR"	"[K].vPEMTmPDIR.[L]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"717.36945"	"1433.73161"	"1433.73299"	"-0.96"	"-0.00069"	"6/82"	"6"	"82"	"339324.142944336"	"HCD"	"MS2"	"27.686"	"16.2"	"100.000"	"66.2105"	"21883"	"21883"	"21864"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.9"	""	"16.9"	""	"26.9"	""	"24.5"	""	"30.7"	"32.0"	""	"720"	"21"	"35.000"	"28.000"	"0.259001632081332"	"18"	"0.007935"	"0.09717"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLR"	"[R].mSVEADINGLR.[R]"	"N-Term(TMT6plex)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"717.38361"	"1433.75994"	"1433.76198"	"-1.43"	"-0.00102"	"8/94"	"8"	"94"	"405099.105834961"	"HCD"	"MS2"	"26.08187"	"21.3"	"100.000"	"78.1200"	"26729"	"26729"	"26715"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.4"	""	"28.9"	""	"34.1"	""	"30.7"	""	"36.1"	"46.6"	""	"908"	"22"	"36.000"	"29.000"	"0.295158879415763"	"26"	"0.0002479"	"0.00558"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLR"	"[R].mSVEADINGLR.[R]"	"N-Term(TMT6plex)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"717.38428"	"1433.76128"	"1433.76198"	"-0.49"	"-0.00035"	"7/94"	"7"	"94"	"634086.285705566"	"HCD"	"MS2"	"22.67856"	"44.5"	"100.000"	"77.8925"	"26630"	"26630"	"26618"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.2"	""	"51.0"	""	"64.8"	""	"64.2"	""	"79.8"	"101.3"	""	"912"	"42"	"36.000"	"29.000"	"0.0029104814970289"	""	"0"	"9.071E-06"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLR"	"[R].mSVEADINGLR.[R]"	"N-Term(TMT6plex)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"717.38477"	"1433.76225"	"1433.76198"	"0.19"	"0.00014"	"7/94"	"7"	"94"	"553340.933105469"	"HCD"	"MS2"	"34.42092"	"38.7"	"100.000"	"77.8223"	"26611"	"26611"	"26601"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.1"	""	"55.3"	""	"58.9"	""	"46.7"	""	"68.1"	"79.9"	""	"915"	"40"	"36.000"	"29.000"	"0.00474669250236741"	"24"	"0"	"0.0002055"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIIDSTVSEQR"	"[K].gIIDSTVSEQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"3"	"3"	"0.6552"	"0.0000"	"1"	"1"	"1"	"478.59784"	"1433.77896"	"1433.77974"	"-0.54"	"-0.00026"	"11/92"	"11"	"92"	"974933.08972168"	"HCD"	"MS2"	"56.01891"	"31.1"	"100.000"	"50.1683"	"15407"	"15407"	"15378"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.9"	""	"30.5"	""	"33.6"	""	"60.3"	"0.9"	"70.0"	"68.8"	""	"1035"	"29"	"37.000"	"30.000"	"0.0707799667245851"	"24"	"0"	"0.002674"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAESNAELK"	"[K].nAESNAELk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"0.3902"	"0.0000"	"1"	"1"	"1"	"717.40326"	"1433.79924"	"1433.80003"	"-0.55"	"-0.00039"	"7/88"	"7"	"88"	"3566392.14221191"	"HCD"	"MS2"	"28.32953"	"276.3"	"100.000"	"35.0259"	"9250"	"9250"	"9226"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"484.9"	""	"396.4"	""	"397.4"	""	"463.7"	"1.9"	"470.3"	"396.4"	""	"1061"	"41"	"37.000"	"30.000"	"0.0040896429033868"	""	"0"	"0.0006744"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAESNAELK"	"[K].nAESNAELk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"717.40338"	"1433.79949"	"1433.80003"	"-0.38"	"-0.00027"	"8/88"	"8"	"88"	"1251367.21148682"	"HCD"	"MS2"	"0"	"112.0"	"100.000"	"35.4436"	"9415"	"9415"	"9394"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"178.1"	""	"143.5"	""	"161.1"	""	"184.6"	"1.9"	"207.9"	"183.3"	""	"1055"	"45"	"37.000"	"30.000"	"0.00156035157610594"	""	"0"	"0.0002799"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAESNAELK"	"[K].nAESNAELk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"0.3864"	"0.0000"	"1"	"1"	"1"	"717.40350"	"1433.79973"	"1433.80003"	"-0.21"	"-0.00015"	"8/88"	"8"	"88"	"640846.555541992"	"HCD"	"MS2"	"4.727434"	"54.0"	"100.000"	"35.4006"	"9403"	"9403"	"9380"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"86.8"	""	"63.2"	""	"76.2"	""	"97.8"	""	"89.1"	"99.4"	""	"1059"	"44"	"37.000"	"30.000"	"0.00221241179139386"	""	"0"	"0.0002422"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAESNAELK"	"[K].nAESNAELk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"0.5581"	"0.0000"	"1"	"1"	"1"	"717.40405"	"1433.80083"	"1433.80003"	"0.56"	"0.00040"	"13/88"	"13"	"88"	"3178814.73126221"	"HCD"	"MS2"	"17.79544"	"251.4"	"100.000"	"35.1358"	"9289"	"9289"	"9271"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"441.5"	""	"337.0"	""	"367.5"	""	"439.5"	""	"427.8"	"365.4"	""	"1054"	"43"	"37.000"	"30.000"	"0.00239227231974657"	""	"0"	"0.0006963"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATADDLIK"	"[R].eATADDLIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"3"	"3"	"0.5250"	"0.0000"	"1"	"1"	"1"	"478.61243"	"1433.82273"	"1433.82518"	"-1.71"	"-0.00082"	"7/74"	"7"	"74"	"924395.252685547"	"HCD"	"MS2"	"30.93392"	"39.0"	"100.000"	"62.7564"	"20482"	"20482"	"20458"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.8"	""	"50.3"	""	"57.9"	""	"55.2"	""	"74.7"	"72.5"	""	"1006"	"40"	"37.000"	"30.000"	"0.00541462002455807"	""	"0.0003538"	"0.006751"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATADDLIK"	"[R].eATADDLIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"717.41504"	"1433.82280"	"1433.82518"	"-1.66"	"-0.00119"	"11/74"	"11"	"74"	"770663.11114502"	"HCD"	"MS2"	"50.10235"	"61.2"	"100.000"	"62.3543"	"20334"	"20334"	"20313"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"94.4"	""	"66.8"	""	"65.4"	""	"108.3"	"0.3"	"128.8"	"117.1"	""	"1006"	"28"	"37.000"	"30.000"	"0.0823318710278188"	"26"	"0"	"0.001205"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATADDLIK"	"[R].eATADDLIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"717.41504"	"1433.82280"	"1433.82518"	"-1.66"	"-0.00119"	"11/74"	"11"	"74"	"828386.374511719"	"HCD"	"MS2"	"55.56375"	"63.8"	"100.000"	"62.4596"	"20361"	"20361"	"20344"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.4"	""	"76.5"	""	"74.6"	""	"107.5"	"0.5"	"121.5"	"120.0"	""	"1006"	"27"	"37.000"	"30.000"	"0.107292159131273"	"26"	"0"	"0.002475"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSEQIEK"	"[K].eLSEQIEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"717.41614"	"1433.82500"	"1433.82518"	"-0.13"	"-0.00009"	"7/74"	"7"	"74"	"2321810.76373291"	"HCD"	"MS2"	"42.42752"	"167.2"	"100.000"	"56.2966"	"17903"	"17903"	"17884"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"250.6"	""	"177.5"	""	"202.7"	""	"304.3"	"0.1"	"311.5"	"338.6"	""	"1002"	"42"	"36.000"	"30.000"	"0.00295690741166094"	""	"0"	"0.002869"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATADDLIK"	"[R].eATADDLIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"717.41626"	"1433.82524"	"1433.82518"	"0.04"	"0.00003"	"12/74"	"12"	"74"	"1007837.78503418"	"HCD"	"MS2"	"5.564146"	"88.9"	"100.000"	"62.7886"	"20495"	"20495"	"20474"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"152.2"	""	"112.3"	""	"110.9"	""	"137.3"	""	"163.6"	"172.4"	""	"1014"	"34"	"37.000"	"30.000"	"0.0201840335470623"	"27"	"0"	"0.0007419"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSEQIEK"	"[K].eLSEQIEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.3226"	"0.0000"	"1"	"1"	"1"	"717.41626"	"1433.82524"	"1433.82518"	"0.04"	"0.00003"	"11/74"	"11"	"74"	"3157624.30511475"	"HCD"	"MS2"	"38.67059"	"203.2"	"100.000"	"56.5960"	"18025"	"18025"	"18006"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"226.5"	""	"173.2"	""	"217.5"	""	"408.7"	""	"483.3"	"429.1"	""	"1014"	"31"	"37.000"	"30.000"	"0.0369834957699066"	""	"0.0006732"	"0.008889"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSEQIEK"	"[K].eLSEQIEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.3043"	"0.0000"	"1"	"1"	"1"	"717.41632"	"1433.82536"	"1433.82518"	"0.13"	"0.00009"	"14/74"	"14"	"74"	"2996939.99493408"	"HCD"	"MS2"	"25.86421"	"215.7"	"100.000"	"56.5110"	"17976"	"17976"	"17957"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"348.6"	""	"229.4"	""	"239.2"	""	"420.9"	""	"407.0"	"398.9"	""	"1013"	"46"	"37.000"	"30.000"	"0.00119833832677654"	""	"0"	"0.002651"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATADDLIK"	"[R].eATADDLIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"717.41638"	"1433.82549"	"1433.82518"	"0.21"	"0.00015"	"12/74"	"12"	"74"	"1272425.7142334"	"HCD"	"MS2"	"6.02577"	"104.4"	"100.000"	"62.6418"	"20451"	"20451"	"20433"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"176.4"	""	"113.2"	""	"125.7"	""	"169.3"	"0.7"	"199.7"	"204.8"	""	"1013"	"36"	"37.000"	"30.000"	"0.0133530184692055"	"30"	"0"	"0.00166"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLAQMEEER"	"[K].sPLAQmEEER.[R]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"717.85803"	"1434.70879"	"1434.70961"	"-0.57"	"-0.00041"	"9/98"	"9"	"98"	"645070.3828125"	"HCD"	"MS2"	"0"	"28.3"	"100.000"	"33.2485"	"8527"	"8527"	"8498"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.5"	""	"20.3"	""	"24.1"	""	"79.7"	"0.5"	"63.4"	"55.4"	""	"590"	"40"	"34.000"	"27.000"	"0.00296361658132127"	"19"	"0.003111"	"0.03106"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLAQMEEER"	"[K].sPLAQmEEER.[R]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"717.85883"	"1434.71037"	"1434.70961"	"0.53"	"0.00038"	"9/98"	"9"	"98"	"554438.372192383"	"HCD"	"MS2"	"0"	"27.0"	"100.000"	"33.2024"	"8515"	"8515"	"8491"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.2"	""	"18.9"	""	"25.5"	""	"76.0"	""	"60.4"	"51.7"	""	"625"	"36"	"34.000"	"27.000"	"0.00823853558070432"	"18"	"0.004817"	"0.051"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQTSGEDWR"	"[R].nLQTSGEDWR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P27645"	"Low affinity immunoglobulin gamma Fc region receptor III OS=Rattus norvegicus OX=10116 GN=Fcgr3 PE=2 SV=1"	"P27645"	"Low affinity immunoglobulin gamma Fc region receptor III OS=Rattus norvegicus OX=10116 GN=Fcgr3 PE=2 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"717.86035"	"1434.71343"	"1434.71747"	"-2.82"	"-0.00202"	"7/98"	"7"	"98"	"510412.079101563"	"HCD"	"MS2"	"43.65806"	"36.2"	"100.000"	"49.3829"	"15086"	"15086"	"15063"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"51.8"	""	"46.0"	""	"49.4"	""	"63.4"	""	"65.3"	"69.8"	""	"626"	"23"	"34.000"	"27.000"	"0.147076855993432"	"21"	"0.003189"	"0.03211"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQTSGEDWR"	"[R].nLQTSGEDWR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P27645"	"Low affinity immunoglobulin gamma Fc region receptor III OS=Rattus norvegicus OX=10116 GN=Fcgr3 PE=2 SV=1"	"P27645"	"Low affinity immunoglobulin gamma Fc region receptor III OS=Rattus norvegicus OX=10116 GN=Fcgr3 PE=2 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"717.86194"	"1434.71660"	"1434.71747"	"-0.61"	"-0.00044"	"8/98"	"8"	"98"	"665419.949584961"	"HCD"	"MS2"	"28.35052"	"42.2"	"100.000"	"49.7935"	"15242"	"15242"	"15217"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.1"	""	"48.0"	""	"61.7"	""	"68.0"	""	"86.4"	"86.1"	""	"664"	"26"	"35.000"	"28.000"	"0.0885397076621132"	"20"	"0"	"0.00134"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQTSGEDWR"	"[R].nLQTSGEDWR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P27645"	"Low affinity immunoglobulin gamma Fc region receptor III OS=Rattus norvegicus OX=10116 GN=Fcgr3 PE=2 SV=1"	"P27645"	"Low affinity immunoglobulin gamma Fc region receptor III OS=Rattus norvegicus OX=10116 GN=Fcgr3 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"717.86230"	"1434.71733"	"1434.71747"	"-0.10"	"-0.00007"	"5/98"	"5"	"98"	"404258.262878418"	"HCD"	"MS2"	"36.93059"	"30.9"	"100.000"	"49.3621"	"15078"	"15078"	"15047"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.0"	""	"36.4"	""	"39.1"	""	"54.8"	""	"61.0"	"60.9"	""	"689"	"18"	"35.000"	"28.000"	"0.528675550574357"	"20"	"0.006189"	"0.07029"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLR"	"[R].mSVEADInGLR.[R]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"1"	"717.87646"	"1434.74565"	"1434.74600"	"-0.24"	"-0.00017"	"10/94"	"10"	"94"	"206679.640319824"	"HCD"	"MS2"	"14.83399"	"14.0"	"100.000"	"73.4165"	"24820"	"24820"	"24796"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.2"	""	"16.0"	""	"15.7"	""	"22.0"	"1.4"	"31.9"	"25.9"	""	"842"	"32"	"36.000"	"29.000"	"0.0287926803505482"	""	"0"	"0.001818"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLR"	"[R].mSVEADInGLR.[R]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"717.87726"	"1434.74724"	"1434.74600"	"0.87"	"0.00062"	"11/94"	"11"	"94"	"197941.910644531"	"HCD"	"MS2"	"23.4977"	"13.8"	"100.000"	"73.3089"	"24790"	"24790"	"24759"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.1"	""	"15.4"	""	"19.1"	""	"22.9"	"1.4"	"24.1"	"30.5"	""	"840"	"34"	"36.000"	"29.000"	"0.0167205011632469"	""	"0"	"0.0003762"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDAQFGGIDQR"	"[K].vDAQFGGIDQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"717.87842"	"1434.74956"	"1434.75386"	"-3.00"	"-0.00215"	"7/108"	"7"	"108"	"213958.002258301"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"61.9005"	"20140"	"20140"	"20113"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.7"	""	"21.6"	""	"24.4"	""	"28.6"	""	"35.4"	"34.8"	""	"820"	"32"	"36.000"	"29.000"	"0.0243659785032385"	"23"	"0.0003538"	"0.007082"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDAQFGGIDQR"	"[K].vDAQFGGIDQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"717.87994"	"1434.75261"	"1434.75386"	"-0.87"	"-0.00062"	"9/108"	"9"	"108"	"988750.926208496"	"HCD"	"MS2"	"0"	"59.1"	"100.000"	"61.5332"	"19989"	"19989"	"19969"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"94.9"	""	"77.8"	""	"89.1"	""	"93.2"	""	"103.6"	"104.5"	""	"825"	"60"	"36.000"	"29.000"	"3.93934441733842E-05"	"28"	"0"	"6.045E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDAQFGGIDQR"	"[K].vDAQFGGIDQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.8226"	"0.0000"	"1"	"1"	"1"	"717.88049"	"1434.75371"	"1434.75386"	"-0.10"	"-0.00007"	"9/108"	"9"	"108"	"753652.055664063"	"HCD"	"MS2"	"17.60466"	"48.8"	"100.000"	"61.3426"	"19927"	"19927"	"19905"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.3"	""	"64.2"	""	"68.4"	""	"78.4"	""	"93.1"	"90.3"	""	"895"	"62"	"36.000"	"29.000"	"2.77838892817953E-05"	"27"	"0"	"6.108E-05"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILGASDPYVR"	"[K].dILGASDPYVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"717.89246"	"1434.77764"	"1434.77901"	"-0.96"	"-0.00069"	"7/92"	"7"	"92"	"259444.725585938"	"HCD"	"MS2"	"0"	"12.3"	"100.000"	"77.1000"	"26319"	"26319"	"26301"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.2"	""	"15.4"	""	"17.8"	""	"28.0"	""	"22.8"	"19.7"	""	"980"	"50"	"36.000"	"29.000"	"0.000540998523752016"	""	"0"	"0.0001785"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILGASDPYVR"	"[K].dILGASDPYVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"717.89270"	"1434.77812"	"1434.77901"	"-0.62"	"-0.00044"	"6/92"	"6"	"92"	"275530.695678711"	"HCD"	"MS2"	"30.5539"	"13.8"	"100.000"	"76.8454"	"26207"	"26207"	"26184"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.8"	""	"17.9"	""	"19.7"	""	"25.8"	""	"26.8"	"24.0"	""	"993"	"23"	"36.000"	"29.000"	"0.277280451686836"	"21"	"0.0008629"	"0.009568"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILGASDPYVR"	"[K].dILGASDPYVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.6591"	"0.0000"	"1"	"1"	"1"	"717.89276"	"1434.77825"	"1434.77901"	"-0.53"	"-0.00038"	"7/92"	"7"	"92"	"407927.25604248"	"HCD"	"MS2"	"18.9573"	"18.5"	"100.000"	"76.7794"	"26189"	"26189"	"26163"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.5"	""	"22.8"	""	"20.8"	""	"36.3"	""	"41.2"	"35.4"	""	"992"	"44"	"36.000"	"29.000"	"0.00189444358336663"	""	"0"	"0.0002684"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILGASDPYVR"	"[K].dILGASDPYVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"717.89313"	"1434.77898"	"1434.77901"	"-0.02"	"-0.00002"	"7/92"	"7"	"92"	"516105.719421387"	"HCD"	"MS2"	"0"	"21.4"	"100.000"	"77.1200"	"26317"	"26317"	"26304"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.4"	""	"21.5"	""	"29.2"	""	"38.4"	""	"43.8"	"46.9"	""	"1010"	"38"	"37.000"	"30.000"	"0.00861571606446578"	"29"	"0"	"0.0008154"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAASGEEIGK"	"[R].dAASGEEIGk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"717.89435"	"1434.78142"	"1434.78404"	"-1.83"	"-0.00131"	"8/84"	"8"	"84"	"882767.425598145"	"HCD"	"MS2"	"0"	"80.8"	"100.000"	"41.0957"	"11715"	"11715"	"11693"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"136.4"	""	"98.6"	""	"105.7"	""	"127.8"	"0.5"	"147.0"	"149.4"	""	"986"	"54"	"36.000"	"29.000"	"0.000186572194265527"	""	"0"	"2.947E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAASGEEIGK"	"[R].dAASGEEIGk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"717.89441"	"1434.78154"	"1434.78404"	"-1.74"	"-0.00125"	"7/84"	"7"	"84"	"1450057.88769531"	"HCD"	"MS2"	"0"	"121.9"	"100.000"	"41.2548"	"11770"	"11770"	"11752"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"162.1"	""	"121.2"	""	"140.3"	""	"222.9"	""	"252.1"	"263.9"	""	"986"	"27"	"36.000"	"29.000"	"0.108604274628535"	"25"	"0"	"0.0004745"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSTSVLSEVR"	"[R].dLSTSVLSEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC2"	"Immunity-related GTPase family M protein OS=Rattus norvegicus OX=10116 GN=Irgm PE=2 SV=1"	"Q6AYC2"	"Immunity-related GTPase family M protein OS=Rattus norvegicus OX=10116 GN=Irgm PE=2 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"717.90253"	"1434.79778"	"1434.80014"	"-1.65"	"-0.00118"	"5/96"	"5"	"96"	"151178.055297852"	"HCD"	"MS2"	"15.7148"	"9.0"	"100.000"	"82.9515"	"28666"	"28666"	"28652"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.6"	""	"9.5"	""	"9.1"	""	"16.9"	""	"20.9"	"18.1"	""	"987"	"32"	"36.000"	"29.000"	"0.0321578612469026"	"22"	"0.002937"	"0.02762"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSTSVLSEVR"	"[R].dLSTSVLSEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC2"	"Immunity-related GTPase family M protein OS=Rattus norvegicus OX=10116 GN=Irgm PE=2 SV=1"	"Q6AYC2"	"Immunity-related GTPase family M protein OS=Rattus norvegicus OX=10116 GN=Irgm PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"717.90314"	"1434.79900"	"1434.80014"	"-0.80"	"-0.00057"	"9/96"	"9"	"96"	"151570.673522949"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"82.9344"	"28658"	"28658"	"28646"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.5"	""	"9.3"	""	"11.7"	""	"13.7"	""	"24.4"	"20.2"	""	"1016"	"24"	"37.000"	"30.000"	"0.210796653658256"	"18"	"0.004867"	"0.0519"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPAPGHQTTLR"	"[R].qPAPGHQTTLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"478.93799"	"1434.79941"	"1434.80148"	"-1.44"	"-0.00069"	"10/102"	"10"	"102"	"18140492.3569336"	"HCD"	"MS2"	"27.25491"	"242.6"	"53.277"	"21.8163"	"3906"	"3906"	"3895"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"389.9"	""	"298.3"	""	"317.8"	""	"394.0"	""	"457.5"	"445.5"	""	"1028"	"45"	"37.000"	"30.000"	"0.00161050886229821"	"21"	"0"	"2.464E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPAPGHQTTLR"	"[R].qPAPGHQTTLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"717.90363"	"1434.79997"	"1434.80148"	"-1.05"	"-0.00075"	"9/102"	"9"	"102"	"1024710.76824951"	"HCD"	"MS2"	"0"	"39.4"	"100.000"	"21.7730"	"3872"	"3872"	"3853"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"74.9"	""	"46.0"	""	"38.0"	""	"81.2"	""	"69.0"	"65.7"	""	"1007"	"31"	"37.000"	"30.000"	"0.0371534779870002"	"17"	"0.0001301"	"0.003926"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPAPGHQTTLR"	"[R].qPAPGHQTTLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"478.93835"	"1434.80051"	"1434.80148"	"-0.67"	"-0.00032"	"10/102"	"10"	"102"	"19096210.9897461"	"HCD"	"MS2"	"34.28132"	"335.8"	"66.797"	"21.8463"	"3901"	"3901"	"3886"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"557.6"	""	"404.1"	""	"419.5"	""	"581.8"	""	"609.3"	"615.8"	""	"1018"	"45"	"37.000"	"30.000"	"0.00172075001628845"	"24"	"0"	"3.643E-05"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPAPGHQTTLR"	"[R].qPAPGHQTTLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"717.90485"	"1434.80242"	"1434.80148"	"0.65"	"0.00047"	"10/102"	"10"	"102"	"981511.601135254"	"HCD"	"MS2"	"0"	"38.2"	"100.000"	"21.7269"	"3871"	"3871"	"3853"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"72.6"	""	"40.3"	""	"35.4"	""	"73.2"	"0.8"	"73.6"	"66.1"	""	"1018"	"42"	"37.000"	"30.000"	"0.0029222527926353"	"25"	"0"	"0.003163"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAQFLVEELK"	"[R].EAQFLVEELk.[K]"	"K10(TMT6plex)"	"1"	"1"	"P05182"	"Cytochrome P450 2E1 OS=Rattus norvegicus OX=10116 GN=Cyp2e1 PE=1 SV=4"	"P05182"	"Cytochrome P450 2E1 OS=Rattus norvegicus OX=10116 GN=Cyp2e1 PE=1 SV=4"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"3"	"717.90698"	"1434.80669"	"1434.80416"	"1.76"	"0.00126"	"5/100"	"5"	"100"	"397588.584899902"	"HCD"	"MS2"	"0"	"38.1"	"100.000"	"63.8160"	"20914"	"20914"	"20888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.6"	""	"30.9"	""	"37.1"	""	"81.1"	""	"103.0"	"78.7"	""	"1060"	"26"	"37.000"	"30.000"	"0.125972535191118"	"30"	"0.009021"	"0.1164"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQDSDTVK"	"[R].aLQDSDTVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6P752"	"Torsin-1A-interacting protein 2 OS=Rattus norvegicus OX=10116 GN=Tor1aip2 PE=2 SV=1"	"Q6P752"	"Torsin-1A-interacting protein 2 OS=Rattus norvegicus OX=10116 GN=Tor1aip2 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"717.91345"	"1434.81963"	"1434.82043"	"-0.56"	"-0.00040"	"6/82"	"6"	"82"	"545394.87878418"	"HCD"	"MS2"	"100"	"47.5"	"100.000"	"44.6490"	"13146"	"13146"	"13123"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"71.3"	""	"52.0"	""	"56.7"	""	"87.7"	""	"80.0"	"106.9"	""	"965"	"16"	"36.000"	"29.000"	"1.17083937087727"	"22"	"0.005183"	"0.05912"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSMGSNQASPAR"	"[K].tSMGSNQASPAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"718.36157"	"1435.71587"	"1435.71609"	"-0.16"	"-0.00011"	"9/116"	"9"	"116"	"684825.077270508"	"HCD"	"MS2"	"0"	"42.7"	"100.000"	"23.7187"	"4665"	"4665"	"4640"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.4"	""	"53.9"	""	"50.9"	""	"61.0"	""	"97.2"	"85.2"	""	"587"	"56"	"34.000"	"27.000"	"7.35543065764926E-05"	"20"	"0"	"2.856E-06"	"1.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSMGSNQASPAR"	"[K].tSMGSNQASPAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"718.36157"	"1435.71587"	"1435.71609"	"-0.16"	"-0.00011"	"9/116"	"9"	"116"	"811221.173828125"	"HCD"	"MS2"	"0"	"46.9"	"100.000"	"23.6612"	"4659"	"4659"	"4634"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"72.0"	""	"57.0"	""	"67.5"	""	"60.7"	"2.4"	"96.1"	"89.1"	""	"587"	"63"	"34.000"	"27.000"	"1.54030989583308E-05"	"22"	"0"	"6.687E-06"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATTADGSSILDR"	"[K].aTTADGSSILDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"718.38080"	"1435.75432"	"1435.75900"	"-3.26"	"-0.00234"	"9/106"	"9"	"106"	"2586039.09735107"	"HCD"	"MS2"	"26.45142"	"136.7"	"100.000"	"48.2224"	"14613"	"14613"	"14594"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"198.7"	"3.1"	"140.1"	""	"151.3"	""	"265.5"	"0.1"	"292.3"	"246.4"	""	"906"	"55"	"36.000"	"29.000"	"0.000139668414146296"	"24"	"0"	"3.571E-06"	"1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATTADGSSILDR"	"[K].aTTADGSSILDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"718.38110"	"1435.75493"	"1435.75900"	"-2.84"	"-0.00204"	"11/106"	"11"	"106"	"2535322.565979"	"HCD"	"MS2"	"19.24718"	"132.9"	"100.000"	"48.5967"	"14753"	"14753"	"14732"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"195.7"	""	"140.5"	""	"167.5"	""	"262.6"	"3.0"	"254.7"	"235.8"	""	"913"	"66"	"36.000"	"29.000"	"1.197955765055E-05"	"24"	"0"	"4.771E-07"	"1.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEDAVEIR"	"[K].eVFEDAVEIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.7321"	"0.0000"	"1"	"1"	"1"	"718.38239"	"1435.75749"	"1435.76303"	"-3.85"	"-0.00277"	"8/86"	"8"	"86"	"230419.507568359"	"HCD"	"MS2"	"24.84977"	"15.1"	"100.000"	"83.7354"	"28972"	"28972"	"28957"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.5"	""	"19.3"	""	"15.7"	""	"27.8"	""	"31.5"	"29.6"	""	"924"	"56"	"36.000"	"29.000"	"0.000105594664715945"	""	"0"	"0.0004736"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATTADGSSILDR"	"[K].aTTADGSSILDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"718.38403"	"1435.76079"	"1435.75900"	"1.24"	"0.00089"	"7/106"	"7"	"106"	"390091.325683594"	"HCD"	"MS2"	"19.28495"	"30.9"	"100.000"	"48.9190"	"14885"	"14885"	"14856"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.6"	""	"35.8"	""	"45.4"	""	"50.5"	"1.9"	"55.6"	"54.0"	""	"945"	"16"	"36.000"	"29.000"	"1.1950933033208"	"19"	"0.007686"	"0.09419"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATTADGSSILDR"	"[K].aTTADGSSILDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"718.38409"	"1435.76091"	"1435.75900"	"1.33"	"0.00095"	"8/106"	"8"	"106"	"436635.712219238"	"HCD"	"MS2"	"15.67044"	"36.2"	"100.000"	"48.5471"	"14746"	"14746"	"14719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.6"	""	"42.5"	""	"53.2"	""	"62.2"	""	"57.5"	"75.6"	""	"955"	"35"	"36.000"	"29.000"	"0.0143871037654887"	"21"	"0"	"0.0006636"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEDAVEIR"	"[K].eVFEDAVEIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"718.38507"	"1435.76286"	"1435.76303"	"-0.11"	"-0.00008"	"7/86"	"7"	"86"	"116101.304199219"	"HCD"	"MS2"	"11.70005"	"8.0"	"100.000"	"84.0472"	"29094"	"29094"	"29072"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.1"	""	"7.9"	""	"10.4"	""	"16.9"	""	"17.4"	"16.9"	""	"964"	"43"	"36.000"	"29.000"	"0.0024493285131419"	"24"	"0.0007829"	"0.00948"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEDAVEIR"	"[K].eVFEDAVEIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"718.38538"	"1435.76348"	"1435.76303"	"0.31"	"0.00022"	"7/86"	"7"	"86"	"124790.794677734"	"HCD"	"MS2"	"11.74959"	"8.0"	"100.000"	"84.0220"	"29085"	"29085"	"29069"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.0"	""	"5.2"	""	"11.0"	""	"16.5"	""	"17.6"	"16.4"	""	"959"	"29"	"36.000"	"29.000"	"0.0591273767533262"	"22"	"0"	"0.002"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEDAVEIR"	"[K].eVFEDAVEIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.6607"	"0.0000"	"1"	"1"	"1"	"718.38593"	"1435.76457"	"1435.76303"	"1.08"	"0.00077"	"7/86"	"7"	"86"	"252506.874938965"	"HCD"	"MS2"	"15.68739"	"17.8"	"100.000"	"83.7489"	"28975"	"28975"	"28960"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.5"	""	"18.7"	""	"18.2"	""	"32.9"	"0.7"	"34.3"	"45.8"	""	"969"	"56"	"36.000"	"29.000"	"0.000112277770790973"	""	"0"	"0.0002832"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEDMENK"	"[R].lVEDMENk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"718.39575"	"1435.78423"	"1435.78669"	"-1.71"	"-0.00123"	"12/64"	"12"	"64"	"561480.569824219"	"HCD"	"MS2"	"24.66555"	"53.0"	"100.000"	"68.5910"	"22868"	"22868"	"22847"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"83.2"	""	"64.7"	""	"75.9"	""	"83.9"	"2.2"	"91.5"	"100.9"	""	"1029"	"32"	"37.000"	"30.000"	"0.0315054276542396"	"29"	"0"	"0.003332"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEDMENK"	"[R].lVEDMENk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"718.39673"	"1435.78618"	"1435.78669"	"-0.35"	"-0.00025"	"7/64"	"7"	"64"	"3175112.05871582"	"HCD"	"MS2"	"0"	"252.6"	"100.000"	"68.8976"	"22993"	"22993"	"22975"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"435.5"	""	"321.1"	""	"335.7"	""	"349.3"	""	"452.3"	"499.2"	""	"1063"	"42"	"37.000"	"30.000"	"0.00355224792187719"	"24"	"0.0003538"	"0.007127"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEDMENK"	"[R].lVEDMENk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"479.26712"	"1435.78681"	"1435.78669"	"0.08"	"0.00004"	"6/64"	"6"	"64"	"2144851.05438232"	"HCD"	"MS2"	"21.87388"	"69.8"	"100.000"	"68.7823"	"22946"	"22946"	"22927"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.9"	"24.5"	"86.5"	""	"100.8"	""	"91.8"	""	"127.0"	"121.6"	""	"1067"	"30"	"37.000"	"30.000"	"0.051184023691375"	"26"	"0.005427"	"0.06162"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEDMENK"	"[R].lVEDMENk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"718.39734"	"1435.78740"	"1435.78669"	"0.50"	"0.00036"	"7/64"	"7"	"64"	"1100640.29870605"	"HCD"	"MS2"	"5.962599"	"95.1"	"100.000"	"68.7977"	"22938"	"22938"	"22917"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"170.0"	""	"122.4"	""	"122.1"	""	"129.2"	"0.2"	"180.7"	"176.7"	""	"1091"	"41"	"37.000"	"30.000"	"0.00389757745874192"	"25"	"0"	"0.002882"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEDMENK"	"[R].lVEDMENk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"718.39734"	"1435.78740"	"1435.78669"	"0.50"	"0.00036"	"7/64"	"7"	"64"	"2310543.39892578"	"HCD"	"MS2"	"0"	"190.7"	"100.000"	"69.1045"	"23063"	"23063"	"23044"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"315.9"	""	"240.0"	""	"273.2"	""	"254.4"	""	"339.6"	"385.4"	""	"1091"	"31"	"37.000"	"30.000"	"0.0449567341739592"	"24"	"0.0008629"	"0.009867"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEDMENK"	"[R].lVEDMENk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"479.26743"	"1435.78772"	"1435.78669"	"0.72"	"0.00035"	"6/64"	"6"	"64"	"2277878.40631104"	"HCD"	"MS2"	"21.51319"	"71.3"	"100.000"	"68.9544"	"23002"	"23002"	"22981"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"102.7"	"25.3"	"96.8"	""	"102.6"	""	"98.9"	"1.9"	"131.5"	"117.1"	""	"1079"	"26"	"37.000"	"30.000"	"0.137718235278574"	"24"	"0.007627"	"0.09359"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPPPGETHK"	"[R].dPPPGETHk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3Z8L7"	"Ras-related protein R-Ras OS=Rattus norvegicus OX=10116 GN=Rras PE=1 SV=1"	"D3Z8L7"	"Ras-related protein R-Ras OS=Rattus norvegicus OX=10116 GN=Rras PE=1 SV=1"	"0"	"3"	"3"	"0.8039"	"0.0000"	"1"	"1"	"1"	"479.26913"	"1435.79285"	"1435.79455"	"-1.18"	"-0.00057"	"12/76"	"12"	"76"	"8095714.88543701"	"HCD"	"MS2"	"11.65176"	"258.8"	"100.000"	"23.3605"	"4536"	"4536"	"4513"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"323.6"	""	"290.4"	""	"298.9"	""	"451.0"	""	"564.7"	"531.4"	""	"1053"	"51"	"37.000"	"30.000"	"0.000445039311976893"	"25"	"0"	"6.236E-05"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPPPGETHK"	"[R].dPPPGETHk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3Z8L7"	"Ras-related protein R-Ras OS=Rattus norvegicus OX=10116 GN=Rras PE=1 SV=1"	"D3Z8L7"	"Ras-related protein R-Ras OS=Rattus norvegicus OX=10116 GN=Rras PE=1 SV=1"	"0"	"3"	"3"	"0.6383"	"0.0000"	"1"	"1"	"1"	"479.26929"	"1435.79331"	"1435.79455"	"-0.86"	"-0.00041"	"11/76"	"11"	"76"	"6121837.05932617"	"HCD"	"MS2"	"22.38405"	"203.3"	"100.000"	"23.3906"	"4531"	"4531"	"4511"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"253.0"	""	"245.7"	""	"221.9"	""	"377.4"	"3.1"	"438.9"	"390.9"	""	"1089"	"47"	"37.000"	"30.000"	"0.00100461089574322"	""	"0"	"6.787E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDPHVDIIR"	"[K].lEDPHVDIIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"3"	"3"	"0.8378"	"0.0000"	"1"	"1"	"1"	"479.27460"	"1435.80924"	"1435.81064"	"-0.98"	"-0.00047"	"7/82"	"7"	"82"	"6516495.64422607"	"HCD"	"MS2"	"12.64924"	"155.5"	"100.000"	"65.3884"	"21564"	"21564"	"21547"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"166.1"	"33.1"	"152.0"	""	"175.2"	""	"229.8"	""	"246.9"	"484.8"	""	"969"	"37"	"36.000"	"29.000"	"0.00869548442200359"	"21"	"0"	"0.0007434"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDPHVDIIR"	"[K].lEDPHVDIIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"479.27509"	"1435.81070"	"1435.81064"	"0.04"	"0.00002"	"10/82"	"10"	"82"	"5106804.43157959"	"HCD"	"MS2"	"15.59309"	"118.4"	"100.000"	"65.4039"	"21554"	"21554"	"21533"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"118.3"	"35.9"	"112.3"	""	"136.8"	""	"167.4"	""	"183.3"	"380.8"	""	"978"	"34"	"36.000"	"29.000"	"0.0192445986897875"	"20"	"0"	"0.001048"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMVETELK"	"[R].qMVETELk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"718.41498"	"1435.82268"	"1435.82307"	"-0.27"	"-0.00020"	"7/74"	"7"	"74"	"1872134.5803833"	"HCD"	"MS2"	"0"	"168.9"	"100.000"	"59.5365"	"19225"	"19225"	"19206"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"280.0"	"1.9"	"214.9"	""	"247.0"	""	"188.2"	"0.8"	"304.8"	"362.6"	""	"931"	"42"	"36.000"	"29.000"	"0.00316898136471937"	""	"0.003922"	"0.04022"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMVETELK"	"[R].qMVETELk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6047"	"0.0000"	"1"	"1"	"1"	"718.41516"	"1435.82305"	"1435.82307"	"-0.02"	"-0.00001"	"7/74"	"7"	"74"	"1888917.08013916"	"HCD"	"MS2"	"0"	"159.9"	"100.000"	"59.7712"	"19306"	"19306"	"19286"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"274.8"	""	"203.4"	""	"206.7"	""	"170.0"	"0.0"	"314.4"	"347.0"	""	"933"	"43"	"36.000"	"29.000"	"0.00221233886123904"	""	"0.004942"	"0.05492"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIPEFSK"	"[K].eEIPEFSk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"718.90485"	"1436.80242"	"1436.80372"	"-0.91"	"-0.00065"	"7/68"	"7"	"68"	"552550.086425781"	"HCD"	"MS2"	"34.31859"	"36.2"	"100.000"	"74.7517"	"25362"	"25362"	"25347"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.3"	""	"37.1"	""	"37.4"	""	"63.0"	"1.3"	"78.3"	"77.0"	""	"1002"	"20"	"36.000"	"30.000"	"0.462208285004536"	"19"	"0.001465"	"0.01816"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIPEFSK"	"[K].eEIPEFSk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"718.90485"	"1436.80242"	"1436.80372"	"-0.91"	"-0.00065"	"11/68"	"11"	"68"	"619607.598571777"	"HCD"	"MS2"	"36.16311"	"40.9"	"100.000"	"74.6329"	"25327"	"25327"	"25310"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.4"	""	"46.0"	""	"42.9"	""	"76.0"	""	"82.7"	"91.7"	""	"1002"	"21"	"36.000"	"30.000"	"0.420569453246218"	"23"	"0.005921"	"0.06755"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLEAAYTDLR"	"[R].rLEAAYTDLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"1"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"479.60675"	"1436.80570"	"1436.80589"	"-0.14"	"-0.00007"	"8/100"	"8"	"100"	"2290751.69366455"	"HCD"	"MS2"	"36.78006"	"55.5"	"100.000"	"49.1294"	"14983"	"14983"	"14960"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.9"	""	"70.0"	""	"82.7"	""	"87.9"	""	"110.7"	"95.9"	""	"983"	"32"	"36.000"	"29.000"	"0.0282828729201213"	"24"	"0.0008629"	"0.01004"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQYGTVEK"	"[K].gPQYGTVEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"0"	"2"	"2"	"0.1786"	"0.0000"	"1"	"1"	"1"	"718.91101"	"1436.81474"	"1436.81495"	"-0.14"	"-0.00010"	"12/80"	"12"	"80"	"452578.750427246"	"HCD"	"MS2"	"0"	"44.1"	"100.000"	"43.6258"	"12746"	"12746"	"12734"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.3"	""	"53.2"	""	"62.8"	""	"60.7"	""	"92.2"	"89.6"	""	"952"	"28"	"36.000"	"29.000"	"0.0745773509371479"	""	"0.0008629"	"0.01025"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSSGLLEWDSK"	"[R].SSSGLLEWDSk.[S]"	"K11(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"719.37476"	"1437.74224"	"1437.74229"	"-0.04"	"-0.00003"	"6/98"	"6"	"98"	"233377.914245605"	"HCD"	"MS2"	"34.17652"	"14.5"	"100.000"	"77.2721"	"26379"	"26379"	"26355"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.6"	""	"19.6"	""	"11.9"	""	"22.6"	""	"30.0"	"38.0"	""	"822"	"34"	"36.000"	"29.000"	"0.0164377292151811"	"20"	"0.0023"	"0.02378"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSSGLLEWDSK"	"[R].SSSGLLEWDSk.[S]"	"K11(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"719.37531"	"1437.74333"	"1437.74229"	"0.73"	"0.00052"	"6/98"	"6"	"98"	"230957.178344727"	"HCD"	"MS2"	"28.74685"	"14.4"	"100.000"	"77.3122"	"26406"	"26406"	"26380"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.4"	""	"14.7"	""	"10.1"	""	"23.9"	""	"32.9"	"33.7"	""	"815"	"31"	"36.000"	"29.000"	"0.0342868520220417"	"15"	"0.003449"	"0.03318"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVYDTDPAK"	"[K].aVYDTDPAk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B0BNM9"	"Glycolipid transfer protein OS=Rattus norvegicus OX=10116 GN=GLTP PE=2 SV=1"	"B0BNM9"	"Glycolipid transfer protein OS=Rattus norvegicus OX=10116 GN=GLTP PE=2 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"719.40344"	"1437.79961"	"1437.79897"	"0.45"	"0.00032"	"6/68"	"6"	"68"	"1270453.2578125"	"HCD"	"MS2"	"16.62122"	"101.3"	"100.000"	"48.5599"	"14738"	"14738"	"14717"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"146.8"	""	"114.1"	""	"126.8"	""	"184.6"	""	"198.0"	"193.1"	""	"913"	"25"	"36.000"	"29.000"	"0.148744454007417"	"20"	"0"	"0.002219"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPSSEVWFDR"	"[K].sPSSEVWFDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P42346"	"Serine/threonine-protein kinase mTOR OS=Rattus norvegicus OX=10116 GN=Mtor PE=1 SV=1"	"P42346"	"Serine/threonine-protein kinase mTOR OS=Rattus norvegicus OX=10116 GN=Mtor PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"719.86127"	"1438.71526"	"1438.71641"	"-0.80"	"-0.00058"	"10/88"	"10"	"88"	"527516.452636719"	"HCD"	"MS2"	"21.80082"	"31.5"	"100.000"	"71.2242"	"23928"	"23928"	"23907"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.5"	""	"41.0"	""	"42.3"	""	"51.3"	"0.2"	"64.5"	"64.9"	""	"646"	"31"	"35.000"	"28.000"	"0.0243894789535935"	"22"	"0.0002479"	"0.005097"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPSSEVWFDR"	"[K].sPSSEVWFDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P42346"	"Serine/threonine-protein kinase mTOR OS=Rattus norvegicus OX=10116 GN=Mtor PE=1 SV=1"	"P42346"	"Serine/threonine-protein kinase mTOR OS=Rattus norvegicus OX=10116 GN=Mtor PE=1 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"719.86139"	"1438.71550"	"1438.71641"	"-0.63"	"-0.00045"	"11/88"	"11"	"88"	"554521.591918945"	"HCD"	"MS2"	"16.81306"	"33.6"	"100.000"	"71.1053"	"23893"	"23893"	"23873"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.1"	""	"42.3"	""	"43.9"	""	"56.5"	""	"65.1"	"72.4"	""	"637"	"37"	"35.000"	"28.000"	"0.00579574723467279"	"22"	"0.002973"	"0.03022"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIEDNEYTAR"	"[R].vIEDNEYTAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"0.9556"	"0.0000"	"1"	"1"	"1"	"719.87201"	"1438.73674"	"1438.73754"	"-0.55"	"-0.00040"	"9/92"	"9"	"92"	"1821484.62329102"	"HCD"	"MS2"	"0"	"93.0"	"100.000"	"47.2679"	"14212"	"14212"	"14193"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.5"	""	"108.8"	""	"102.8"	""	"161.8"	""	"199.2"	"210.0"	""	"751"	"45"	"35.000"	"28.000"	"0.00124053762659324"	"18"	"0"	"4.736E-05"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIEDNEYTAR"	"[R].vIEDNEYTAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"719.87219"	"1438.73711"	"1438.73754"	"-0.30"	"-0.00022"	"9/92"	"9"	"92"	"2112523.73339844"	"HCD"	"MS2"	"0"	"106.8"	"100.000"	"47.0433"	"14132"	"14132"	"14110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"122.4"	""	"126.8"	""	"111.1"	""	"188.7"	""	"221.3"	"245.2"	""	"752"	"51"	"35.000"	"28.000"	"0.000293216121556745"	"22"	"0"	"9.521E-05"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEEGPTLSYGR"	"[R].tEEGPTLSYGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"719.87329"	"1438.73931"	"1438.73754"	"1.23"	"0.00088"	"9/94"	"9"	"94"	"574565.455627441"	"HCD"	"MS2"	"0"	"34.2"	"100.000"	"46.6912"	"13988"	"13988"	"13972"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"51.5"	""	"29.2"	""	"31.0"	""	"74.1"	"0.2"	"74.8"	"64.1"	""	"758"	"40"	"35.000"	"28.000"	"0.00407041987277332"	""	"0.0001301"	"0.003829"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEEGPTLSYGR"	"[R].tEEGPTLSYGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.5366"	"0.0000"	"1"	"1"	"1"	"719.87360"	"1438.73992"	"1438.73754"	"1.65"	"0.00119"	"7/94"	"7"	"94"	"515725.493591309"	"HCD"	"MS2"	"0"	"30.1"	"100.000"	"46.9276"	"14073"	"14073"	"14057"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.6"	""	"28.1"	""	"37.7"	""	"55.8"	"1.0"	"64.3"	"56.6"	""	"749"	"41"	"35.000"	"28.000"	"0.00312933330327603"	""	"0"	"0.003426"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINDYVEK"	"[K].vInDYVEk.[G]"	"N-Term(TMT6plex); N3(Deamidated); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"719.91302"	"1438.81877"	"1438.81937"	"-0.41"	"-0.00030"	"14/72"	"14"	"72"	"983568.141967773"	"HCD"	"MS2"	"5.02632"	"73.7"	"100.000"	"70.2966"	"23563"	"23563"	"23544"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"116.4"	""	"79.5"	""	"78.8"	""	"126.5"	"2.4"	"145.3"	"150.6"	""	"745"	"42"	"35.000"	"28.000"	"0.00211897716739331"	"23"	"0"	"0.001517"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINDYVEK"	"[K].vInDYVEk.[G]"	"N-Term(TMT6plex); N3(Deamidated); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"719.91364"	"1438.81999"	"1438.81937"	"0.44"	"0.00031"	"14/72"	"14"	"72"	"838542.449523926"	"HCD"	"MS2"	"1.476776"	"67.0"	"100.000"	"70.4782"	"23623"	"23623"	"23605"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"102.3"	""	"72.7"	""	"89.9"	""	"113.5"	""	"129.4"	"132.5"	""	"733"	"42"	"35.000"	"28.000"	"0.00217808076132607"	"23"	"0"	"0.002072"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHEEFEK"	"[K].yHEEFEk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"480.59009"	"1439.75571"	"1439.75710"	"-0.97"	"-0.00046"	"6/54"	"6"	"54"	"8580286.91778564"	"HCD"	"MS2"	"27.45395"	"296.1"	"100.000"	"40.5792"	"11507"	"11507"	"11491"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"388.6"	""	"314.3"	""	"356.4"	""	"648.2"	""	"661.6"	"440.2"	""	"789"	"27"	"35.000"	"28.000"	"0.0744812587218487"	"23"	"0.0006732"	"0.008377"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHEEFEK"	"[K].yHEEFEk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"3"	"3"	"0.6176"	"0.0000"	"1"	"1"	"1"	"480.59042"	"1439.75672"	"1439.75710"	"-0.27"	"-0.00013"	"6/54"	"6"	"54"	"8635144.87200928"	"HCD"	"MS2"	"23.36469"	"304.4"	"100.000"	"40.7751"	"11576"	"11576"	"11557"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"411.8"	""	"317.2"	""	"369.1"	""	"674.2"	"3.7"	"676.1"	"434.9"	""	"794"	"34"	"35.000"	"28.000"	"0.0168186257521668"	"27"	"0.0001301"	"0.00418"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGDFEK"	"[R].gELSGDFEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"720.39075"	"1439.77422"	"1439.77823"	"-2.79"	"-0.00201"	"7/76"	"7"	"76"	"1180168.59423828"	"HCD"	"MS2"	"20.15108"	"116.6"	"100.000"	"63.0145"	"20587"	"20587"	"20567"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"185.7"	""	"135.8"	""	"139.7"	""	"228.7"	""	"208.8"	"212.9"	""	"850"	"38"	"36.000"	"29.000"	"0.00638835335588261"	"25"	"0"	"0.001125"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGDFEK"	"[R].gELSGDFEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.3704"	"0.0000"	"1"	"1"	"1"	"480.59698"	"1439.77640"	"1439.77823"	"-1.27"	"-0.00061"	"10/76"	"10"	"76"	"1659796.70544434"	"HCD"	"MS2"	"9.355202"	"70.7"	"100.000"	"63.1639"	"20648"	"20648"	"20625"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"98.8"	""	"90.6"	""	"101.6"	""	"115.9"	"1.4"	"128.1"	"133.4"	""	"851"	"27"	"36.000"	"29.000"	"0.0950384980814391"	""	"0.003717"	"0.03839"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGDFEK"	"[R].gELSGDFEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.5600"	"0.0000"	"1"	"1"	"1"	"480.59717"	"1439.77695"	"1439.77823"	"-0.89"	"-0.00043"	"6/76"	"6"	"76"	"1877091.21447754"	"HCD"	"MS2"	"27.82224"	"71.4"	"100.000"	"63.4207"	"20767"	"20767"	"20747"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"107.3"	""	"86.9"	""	"96.7"	""	"111.1"	""	"132.8"	"143.0"	""	"891"	"25"	"36.000"	"29.000"	"0.144826390985211"	"25"	"0.0003538"	"0.00613"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGDFEK"	"[R].gELSGDFEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.6857"	"0.0000"	"1"	"1"	"1"	"480.59720"	"1439.77704"	"1439.77823"	"-0.83"	"-0.00040"	"7/76"	"7"	"76"	"2540990.44262695"	"HCD"	"MS2"	"25.64914"	"91.3"	"100.000"	"63.0636"	"20622"	"20622"	"20605"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"136.8"	""	"103.3"	""	"122.1"	""	"162.7"	""	"165.1"	"175.1"	""	"885"	"35"	"36.000"	"29.000"	"0.0151674745546804"	"25"	"0"	"0.001947"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGDFEK"	"[R].gELSGDFEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"480.59735"	"1439.77750"	"1439.77823"	"-0.51"	"-0.00024"	"7/76"	"7"	"76"	"2966556.41534424"	"HCD"	"MS2"	"18.5365"	"107.6"	"100.000"	"63.4541"	"20766"	"20766"	"20747"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"166.2"	""	"121.9"	""	"148.0"	""	"168.9"	""	"217.1"	"205.5"	""	"885"	"34"	"36.000"	"29.000"	"0.0188761437069705"	"26"	"0.0001301"	"0.004242"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGDFEK"	"[R].gELSGDFEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"720.39246"	"1439.77764"	"1439.77823"	"-0.41"	"-0.00030"	"9/76"	"9"	"76"	"2659695.54644775"	"HCD"	"MS2"	"4.72184"	"229.7"	"100.000"	"63.4964"	"20798"	"20798"	"20779"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"355.9"	""	"257.5"	""	"285.7"	""	"401.0"	""	"406.3"	"473.3"	""	"874"	"35"	"36.000"	"29.000"	"0.0142390638337878"	"24"	"0"	"0.001048"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGDFEK"	"[R].gELSGDFEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"720.39252"	"1439.77776"	"1439.77823"	"-0.33"	"-0.00024"	"7/76"	"7"	"76"	"1347478.77746582"	"HCD"	"MS2"	"17.34826"	"131.3"	"100.000"	"62.9090"	"20560"	"20560"	"20535"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"198.1"	""	"156.1"	""	"151.6"	""	"233.0"	""	"248.8"	"258.4"	""	"866"	"26"	"36.000"	"29.000"	"0.1041089092403"	"20"	"0"	"0.001287"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGDFEK"	"[R].gELSGDFEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"720.39252"	"1439.77776"	"1439.77823"	"-0.33"	"-0.00024"	"13/76"	"13"	"76"	"2617336.54803467"	"HCD"	"MS2"	"5.500708"	"238.4"	"100.000"	"63.6041"	"20828"	"20828"	"20811"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"348.6"	""	"264.2"	""	"291.6"	""	"419.9"	""	"438.0"	"501.1"	""	"866"	"41"	"36.000"	"29.000"	"0.00318044504912031"	"24"	"0"	"0.000681"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGDFEK"	"[R].gELSGDFEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"720.39264"	"1439.77800"	"1439.77823"	"-0.16"	"-0.00011"	"14/76"	"14"	"76"	"7652025.92749023"	"HCD"	"MS2"	"0"	"684.6"	"100.000"	"63.2017"	"20679"	"20679"	"20662"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1044.0"	""	"783.7"	""	"874.3"	""	"1147.3"	"6.3"	"1292.4"	"1341.3"	""	"866"	"43"	"36.000"	"29.000"	"0.00235769648680768"	"28"	"0"	"0.0009633"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGDFEK"	"[R].gELSGDFEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.4884"	"0.0000"	"1"	"1"	"1"	"720.39343"	"1439.77959"	"1439.77823"	"0.94"	"0.00068"	"14/76"	"14"	"76"	"7580404.24578857"	"HCD"	"MS2"	"0"	"671.3"	"100.000"	"63.2976"	"20703"	"20703"	"20689"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1066.1"	""	"758.6"	""	"880.2"	""	"1121.9"	""	"1244.3"	"1298.2"	""	"873"	"43"	"36.000"	"29.000"	"0.00240427559480958"	""	"0"	"0.0007879"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAEAYLGK"	"[K].eTAEAYLGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"720.40961"	"1439.81194"	"1439.81462"	"-1.86"	"-0.00134"	"10/70"	"10"	"70"	"200494.564208984"	"HCD"	"MS2"	"41.05659"	"22.4"	"100.000"	"64.5935"	"21245"	"21245"	"21215"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.1"	""	"25.3"	""	"23.2"	""	"33.0"	""	"47.3"	"51.4"	""	"737"	"28"	"35.000"	"28.000"	"0.0532644555519875"	"22"	"0.0001301"	"0.004686"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDQDYILK"	"[K].sDQDYILk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"720.41010"	"1439.81291"	"1439.81462"	"-1.18"	"-0.00085"	"7/72"	"7"	"72"	"1031051.25231934"	"HCD"	"MS2"	"0"	"89.0"	"100.000"	"65.2870"	"21522"	"21522"	"21501"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"136.8"	""	"99.7"	""	"100.4"	""	"149.2"	"2.9"	"179.3"	"176.4"	""	"737"	"42"	"35.000"	"28.000"	"0.00225651119350579"	"23"	"0"	"0.002745"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDQDYILK"	"[K].sDQDYILk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"720.41089"	"1439.81450"	"1439.81462"	"-0.08"	"-0.00006"	"7/72"	"7"	"72"	"806666.713500977"	"HCD"	"MS2"	"10.84339"	"75.9"	"100.000"	"65.3301"	"21524"	"21524"	"21502"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"110.4"	""	"83.7"	""	"89.9"	""	"131.3"	""	"140.6"	"165.3"	""	"737"	"38"	"35.000"	"28.000"	"0.00535103131081083"	"22"	"0"	"0.002435"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYVQEVTK"	"[K].dYVQEVTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4KLJ8"	"Phosducin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Pdcl3 PE=1 SV=1"	"Q4KLJ8"	"Phosducin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Pdcl3 PE=1 SV=1"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"720.41101"	"1439.81474"	"1439.81462"	"0.09"	"0.00006"	"7/76"	"7"	"76"	"422655.797485352"	"HCD"	"MS2"	"7.450497"	"39.6"	"100.000"	"58.3900"	"18742"	"18742"	"18719"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.9"	""	"42.6"	""	"53.8"	""	"61.7"	""	"75.4"	"85.7"	""	"737"	"46"	"35.000"	"28.000"	"0.000910830347438444"	"25"	"0"	"0.002525"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYVQEVTK"	"[K].dYVQEVTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4KLJ8"	"Phosducin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Pdcl3 PE=1 SV=1"	"Q4KLJ8"	"Phosducin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Pdcl3 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"720.41180"	"1439.81633"	"1439.81462"	"1.19"	"0.00086"	"7/76"	"7"	"76"	"437778.876037598"	"HCD"	"MS2"	"0"	"39.5"	"100.000"	"58.1993"	"18679"	"18679"	"18655"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.0"	""	"48.3"	""	"50.9"	""	"59.6"	"0.6"	"68.4"	"76.0"	""	"745"	"45"	"35.000"	"28.000"	"0.00131864009553579"	"24"	"0"	"0.002864"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYTAAVEAK"	"[R].eYTAAVEAk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"720.41187"	"1439.81645"	"1439.81462"	"1.28"	"0.00092"	"13/76"	"13"	"76"	"851671.510681152"	"HCD"	"MS2"	"31.24285"	"69.0"	"100.000"	"51.8611"	"16085"	"16085"	"16059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.5"	""	"87.0"	""	"98.4"	""	"100.2"	"0.4"	"126.8"	"136.2"	""	"745"	"39"	"35.000"	"28.000"	"0.00451987346798204"	"18"	"0"	"0.0003728"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYTAAVEAK"	"[R].eYTAAVEAk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"720.41217"	"1439.81706"	"1439.81462"	"1.70"	"0.00122"	"11/76"	"11"	"76"	"456206.805664063"	"HCD"	"MS2"	"39.16904"	"45.6"	"100.000"	"51.6599"	"16014"	"16014"	"15989"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.8"	""	"62.7"	""	"56.9"	""	"74.4"	"1.7"	"75.3"	"92.7"	""	"707"	"29"	"35.000"	"28.000"	"0.0464931978179957"	"18"	"0"	"0.001381"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQAFIEMETR"	"[K].sQAFIEMETR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.9216"	"0.0000"	"1"	"1"	"1"	"720.87152"	"1440.73577"	"1440.73543"	"0.23"	"0.00017"	"8/104"	"8"	"104"	"490666.274780273"	"HCD"	"MS2"	"0"	"31.3"	"100.000"	"64.9612"	"21375"	"21375"	"21351"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.5"	""	"31.1"	""	"32.1"	""	"46.6"	"1.5"	"75.1"	"68.0"	""	"685"	"51"	"35.000"	"28.000"	"0.000269563182970571"	"19"	"0"	"5.592E-05"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQAFIEMETR"	"[K].sQAFIEMETR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.9403"	"0.0000"	"1"	"1"	"1"	"720.87164"	"1440.73601"	"1440.73543"	"0.40"	"0.00029"	"8/104"	"8"	"104"	"497306.543212891"	"HCD"	"MS2"	"0"	"31.1"	"100.000"	"64.8735"	"21355"	"21355"	"21326"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.3"	""	"30.9"	""	"34.0"	""	"46.6"	"1.0"	"64.7"	"77.2"	""	"684"	"67"	"35.000"	"28.000"	"7.44776742144779E-06"	"20"	"0"	"4.763E-05"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYEPEMGK"	"[K].eYEPEMGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"3"	"3"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"720.87592"	"1440.74455"	"1440.74449"	"0.05"	"0.00003"	"6/64"	"6"	"64"	"2035747.45092773"	"HCD"	"MS2"	"47.38078"	"185.8"	"100.000"	"52.2521"	"16244"	"16244"	"16224"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"216.3"	""	"179.5"	""	"224.4"	""	"225.0"	""	"383.5"	"543.7"	""	"711"	"20"	"35.000"	"28.000"	"0.383565559752704"	"17"	"0.0023"	"0.02382"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYEPEMGK"	"[K].eYEPEMGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"3"	"3"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"720.87604"	"1440.74480"	"1440.74449"	"0.22"	"0.00016"	"6/64"	"6"	"64"	"1748963.48236084"	"HCD"	"MS2"	"41.37209"	"153.3"	"100.000"	"51.9911"	"16149"	"16149"	"16126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"172.0"	""	"144.0"	""	"177.2"	""	"181.9"	""	"313.8"	"472.0"	""	"720"	"20"	"35.000"	"28.000"	"0.396554151434909"	"18"	"0.001635"	"0.0199"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFDNAETK"	"[R].gTFDNAETk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"720.88818"	"1440.76909"	"1440.77348"	"-3.05"	"-0.00219"	"7/84"	"7"	"84"	"424761.574829102"	"HCD"	"MS2"	"0"	"46.1"	"100.000"	"42.1921"	"12162"	"12162"	"12140"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.2"	""	"48.3"	""	"48.3"	""	"78.0"	""	"100.4"	"105.7"	""	"773"	"42"	"35.000"	"28.000"	"0.00269246147703812"	"18"	"0"	"0.001722"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFDNAETK"	"[R].gTFDNAETk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"720.88947"	"1440.77165"	"1440.77348"	"-1.27"	"-0.00091"	"8/84"	"8"	"84"	"2213294.66278076"	"HCD"	"MS2"	"0"	"203.7"	"100.000"	"41.8862"	"12037"	"12037"	"12015"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"246.2"	""	"213.4"	""	"222.5"	""	"376.9"	"0.9"	"455.5"	"421.3"	""	"770"	"60"	"35.000"	"28.000"	"4.01292210316422E-05"	"27"	"0"	"0.0002624"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFDNAETK"	"[R].gTFDNAETk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"720.89014"	"1440.77300"	"1440.77348"	"-0.34"	"-0.00024"	"11/84"	"11"	"84"	"500029.090515137"	"HCD"	"MS2"	"0"	"51.7"	"100.000"	"42.3028"	"12197"	"12197"	"12175"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.0"	""	"53.1"	""	"56.6"	""	"92.2"	""	"116.2"	"115.6"	""	"795"	"35"	"35.000"	"29.000"	"0.0112547831833025"	"19"	"0"	"0.001306"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFDNAETK"	"[R].gTFDNAETk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7759"	"0.0000"	"1"	"1"	"1"	"720.89032"	"1440.77336"	"1440.77348"	"-0.08"	"-0.00006"	"8/84"	"8"	"84"	"1058347.4119873"	"HCD"	"MS2"	"0"	"101.7"	"100.000"	"41.9761"	"12064"	"12064"	"12033"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"124.3"	""	"98.5"	""	"129.7"	""	"189.2"	""	"210.8"	"215.1"	""	"793"	"58"	"35.000"	"28.000"	"6.9221848363298E-05"	""	"0"	"0.000148"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDELTFTK"	"[R].eDELTFTk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"720.90149"	"1440.79570"	"1440.79863"	"-2.03"	"-0.00146"	"14/68"	"14"	"68"	"289540.666381836"	"HCD"	"MS2"	"0"	"26.6"	"100.000"	"72.1670"	"24312"	"24312"	"24282"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.3"	""	"32.2"	""	"27.0"	""	"51.0"	"1.3"	"52.2"	"54.4"	""	"746"	"47"	"35.000"	"28.000"	"0.000678748420261523"	"21"	"0"	"0.0008809"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDELTFTK"	"[R].eDELTFTk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"720.90289"	"1440.79851"	"1440.79863"	"-0.08"	"-0.00006"	"7/68"	"7"	"68"	"340998.534484863"	"HCD"	"MS2"	"9.025617"	"30.7"	"100.000"	"72.0597"	"24281"	"24281"	"24262"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.5"	""	"31.0"	""	"35.2"	""	"60.9"	""	"64.3"	"64.0"	""	"736"	"44"	"35.000"	"28.000"	"0.00155184313261718"	"19"	"0"	"0.001548"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDELTFTK"	"[R].eDELTFTk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"720.90295"	"1440.79863"	"1440.79863"	"0.00"	"0.00000"	"10/68"	"10"	"68"	"166424.697631836"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"72.5034"	"24449"	"24449"	"24425"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.9"	""	"17.3"	""	"18.5"	""	"32.3"	""	"34.4"	"36.1"	""	"736"	"33"	"35.000"	"28.000"	"0.0190918414325858"	"19"	"0.000936"	"0.01321"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"721.40198"	"1441.79668"	"1441.80008"	"-2.36"	"-0.00170"	"8/102"	"8"	"102"	"901357.801940918"	"HCD"	"MS2"	"17.24637"	"42.5"	"100.000"	"66.1437"	"21856"	"21856"	"21832"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"82.5"	""	"66.0"	""	"50.9"	""	"65.8"	""	"67.4"	"71.4"	""	"802"	"32"	"36.000"	"29.000"	"0.0263114251787465"	"16"	"0"	"0.0004899"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"721.40234"	"1441.79741"	"1441.80008"	"-1.85"	"-0.00133"	"10/102"	"10"	"102"	"496240.519042969"	"HCD"	"MS2"	"7.447569"	"27.7"	"100.000"	"65.7480"	"21710"	"21710"	"21686"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.6"	""	"43.5"	""	"39.2"	""	"37.8"	"0.9"	"54.6"	"44.5"	""	"804"	"46"	"36.000"	"29.000"	"0.00103568110511504"	"19"	"0"	"1.491E-05"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9636"	"0.0000"	"1"	"1"	"1"	"721.40259"	"1441.79790"	"1441.80008"	"-1.51"	"-0.00109"	"8/102"	"8"	"102"	"596618.749572754"	"HCD"	"MS2"	"17.23867"	"31.3"	"100.000"	"66.7959"	"22122"	"22122"	"22100"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.9"	""	"52.0"	""	"35.8"	""	"50.3"	"0.5"	"58.6"	"56.2"	""	"798"	"55"	"36.000"	"29.000"	"0.000124443694405348"	"18"	"0"	"0.0001029"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9792"	"0.0000"	"1"	"1"	"1"	"721.40259"	"1441.79790"	"1441.80008"	"-1.51"	"-0.00109"	"13/102"	"13"	"102"	"692037.708190918"	"HCD"	"MS2"	"14.52381"	"32.9"	"100.000"	"66.7002"	"22098"	"22098"	"22077"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.8"	""	"46.0"	""	"42.3"	""	"50.7"	"0.4"	"60.8"	"53.7"	""	"798"	"48"	"36.000"	"29.000"	"0.000639694910885326"	"16"	"0"	"0.0001598"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40265"	"1441.79802"	"1441.80008"	"-1.43"	"-0.00103"	"7/102"	"7"	"102"	"396012.338500977"	"HCD"	"MS2"	"30.74119"	"21.6"	"100.000"	"67.9798"	"22619"	"22619"	"22594"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.7"	""	"25.5"	""	"32.2"	""	"40.1"	"1.3"	"31.4"	"25.6"	""	"798"	"41"	"36.000"	"29.000"	"0.00347514472392476"	"15"	"0"	"0.0001963"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"721.40283"	"1441.79839"	"1441.80008"	"-1.17"	"-0.00085"	"13/102"	"13"	"102"	"736566.484619141"	"HCD"	"MS2"	"19.72809"	"33.7"	"100.000"	"66.3544"	"21957"	"21957"	"21933"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"51.7"	""	"49.3"	""	"44.0"	""	"53.8"	""	"66.8"	"56.0"	""	"793"	"31"	"35.000"	"28.000"	"0.0294607088176042"	"17"	"0"	"0.0004691"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40295"	"1441.79863"	"1441.80008"	"-1.00"	"-0.00072"	"10/102"	"10"	"102"	"262474.093444824"	"HCD"	"MS2"	"14.61894"	"18.3"	"100.000"	"68.6325"	"22885"	"22885"	"22863"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.5"	""	"24.1"	""	"27.3"	""	"27.7"	""	"31.7"	"30.6"	""	"797"	"27"	"36.000"	"29.000"	"0.0823053992090496"	"14"	"0.006574"	"0.07401"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"721.40302"	"1441.79875"	"1441.80008"	"-0.92"	"-0.00066"	"10/102"	"10"	"102"	"746412.505737305"	"HCD"	"MS2"	"18.5176"	"34.9"	"100.000"	"66.0523"	"21834"	"21834"	"21812"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.0"	""	"54.8"	""	"40.0"	""	"61.0"	""	"55.6"	"53.3"	""	"800"	"34"	"36.000"	"29.000"	"0.0147931271912107"	"19"	"0"	"7.719E-05"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40320"	"1441.79912"	"1441.80008"	"-0.67"	"-0.00048"	"7/102"	"7"	"102"	"412033.609924316"	"HCD"	"MS2"	"40.10714"	"20.2"	"100.000"	"68.0644"	"22639"	"22639"	"22615"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.1"	""	"27.4"	""	"26.2"	""	"36.1"	""	"31.3"	"28.4"	""	"804"	"34"	"36.000"	"29.000"	"0.0145286764781124"	"15"	"0"	"0.0002465"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40332"	"1441.79936"	"1441.80008"	"-0.50"	"-0.00036"	"11/102"	"11"	"102"	"303339.796264648"	"HCD"	"MS2"	"9.853314"	"18.3"	"100.000"	"68.4079"	"22779"	"22779"	"22757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.6"	""	"29.2"	""	"24.6"	""	"27.8"	""	"32.3"	"26.8"	""	"802"	"38"	"36.000"	"29.000"	"0.00665494349882462"	"15"	"0"	"0.001847"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"721.40332"	"1441.79936"	"1441.80008"	"-0.50"	"-0.00036"	"8/102"	"8"	"102"	"518705.47265625"	"HCD"	"MS2"	"6.949199"	"24.4"	"100.000"	"67.1072"	"22249"	"22249"	"22226"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.6"	""	"37.9"	""	"33.6"	""	"35.5"	""	"45.8"	"39.2"	""	"802"	"48"	"36.000"	"29.000"	"0.000695255403099409"	"19"	"0"	"0.000137"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"721.40338"	"1441.79949"	"1441.80008"	"-0.41"	"-0.00030"	"7/102"	"7"	"102"	"463396.703735352"	"HCD"	"MS2"	"0"	"27.2"	"100.000"	"65.8256"	"21726"	"21726"	"21708"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.5"	""	"46.5"	""	"36.6"	""	"44.8"	""	"46.5"	"45.2"	""	"802"	"44"	"36.000"	"29.000"	"0.00177887066216504"	"18"	"0"	"8.346E-05"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40350"	"1441.79973"	"1441.80008"	"-0.24"	"-0.00017"	"11/102"	"11"	"102"	"213628.344238281"	"HCD"	"MS2"	"27.21932"	"13.5"	"100.000"	"69.3553"	"23166"	"23166"	"23139"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.7"	""	"18.7"	""	"15.8"	""	"25.3"	""	"18.0"	"28.1"	""	"793"	"18"	"35.000"	"28.000"	"0.682720889981952"	"14"	"0.00447"	"0.04722"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"721.40369"	"1441.80010"	"1441.80008"	"0.01"	"0.00001"	"16/102"	"16"	"102"	"608053.428161621"	"HCD"	"MS2"	"0"	"30.5"	"100.000"	"67.4120"	"22373"	"22373"	"22354"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.3"	""	"49.0"	""	"37.4"	""	"52.0"	""	"48.9"	"51.9"	""	"790"	"32"	"35.000"	"28.000"	"0.0241878404731285"	"26"	"0"	"0.000553"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40369"	"1441.80010"	"1441.80008"	"0.01"	"0.00001"	"8/102"	"8"	"102"	"534012.43548584"	"HCD"	"MS2"	"18.74953"	"27.6"	"100.000"	"67.6385"	"22481"	"22481"	"22456"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.5"	""	"42.6"	""	"29.8"	""	"47.9"	"0.8"	"39.8"	"50.6"	""	"790"	"39"	"35.000"	"28.000"	"0.00510031613077345"	"15"	"0"	"0.000176"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9773"	"0.0000"	"1"	"1"	"1"	"721.40369"	"1441.80010"	"1441.80008"	"0.01"	"0.00001"	"8/102"	"8"	"102"	"615985.395080566"	"HCD"	"MS2"	"0"	"31.6"	"100.000"	"67.0226"	"22230"	"22230"	"22204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.0"	""	"52.7"	""	"37.3"	""	"49.1"	""	"55.9"	"53.6"	""	"790"	"44"	"35.000"	"28.000"	"0.00168498909926629"	"17"	"0"	"9.052E-05"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"721.40375"	"1441.80022"	"1441.80008"	"0.10"	"0.00007"	"9/102"	"9"	"102"	"627838.24017334"	"HCD"	"MS2"	"7.846685"	"32.4"	"100.000"	"67.3249"	"22353"	"22353"	"22332"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.7"	""	"43.1"	""	"41.4"	""	"60.9"	"0.4"	"61.1"	"52.4"	""	"790"	"36"	"35.000"	"28.000"	"0.0104135089740102"	""	"0"	"0.0004845"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9245"	"0.0000"	"1"	"1"	"1"	"721.40424"	"1441.80120"	"1441.80008"	"0.77"	"0.00056"	"8/102"	"8"	"102"	"504992.595581055"	"HCD"	"MS2"	"11.72622"	"25.2"	"100.000"	"67.7278"	"22502"	"22502"	"22478"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.1"	""	"41.3"	""	"25.6"	""	"50.4"	""	"36.1"	"39.5"	""	"780"	"53"	"35.000"	"28.000"	"0.000193671005365631"	"19"	"0"	"0.0001623"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"721.40430"	"1441.80132"	"1441.80008"	"0.86"	"0.00062"	"5/102"	"5"	"102"	"334334.020263672"	"HCD"	"MS2"	"29.98602"	"23.5"	"100.000"	"68.2889"	"22745"	"22745"	"22719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.1"	""	"33.2"	""	"27.7"	""	"45.2"	"0.7"	"31.8"	"38.9"	""	"780"	"11"	"35.000"	"28.000"	"2.83834123769361"	"22"	"0.00447"	"0.04818"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40466"	"1441.80205"	"1441.80008"	"1.37"	"0.00098"	"6/102"	"6"	"102"	"282121.451293945"	"HCD"	"MS2"	"18.56227"	"20.4"	"100.000"	"68.7171"	"22905"	"22905"	"22885"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.4"	""	"31.1"	""	"26.0"	""	"34.3"	""	"29.8"	"31.9"	""	"780"	"33"	"35.000"	"28.000"	"0.0183258702356034"	"15"	"0.0006732"	"0.009174"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVnDLPVGR.[S]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.8136"	"0.0000"	"1"	"1"	"1"	"721.41370"	"1441.82012"	"1441.82121"	"-0.76"	"-0.00055"	"8/106"	"8"	"106"	"561391.707458496"	"HCD"	"MS2"	"0"	"25.2"	"100.000"	"75.8687"	"25810"	"25810"	"25791"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.2"	""	"40.0"	""	"38.5"	""	"40.4"	""	"35.5"	"43.4"	""	"736"	"59"	"35.000"	"28.000"	"4.82889562839067E-05"	"19"	"0"	"6.865E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVnDLPVGR.[S]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"721.41370"	"1441.82012"	"1441.82121"	"-0.76"	"-0.00055"	"16/106"	"16"	"106"	"833253.002441406"	"HCD"	"MS2"	"2.566656"	"35.0"	"100.000"	"75.6994"	"25751"	"25751"	"25735"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.9"	""	"47.7"	""	"51.7"	""	"59.4"	""	"56.5"	"59.4"	""	"736"	"55"	"35.000"	"28.000"	"0.00011963212543784"	"19"	"0"	"4.546E-05"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVnDLPVGR.[S]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"721.41406"	"1441.82085"	"1441.82121"	"-0.25"	"-0.00018"	"7/106"	"7"	"106"	"607365.25213623"	"HCD"	"MS2"	"0"	"27.5"	"100.000"	"75.5504"	"25681"	"25681"	"25659"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.0"	""	"35.5"	""	"41.0"	""	"42.7"	""	"49.9"	"41.7"	""	"731"	"47"	"35.000"	"28.000"	"0.000659002984284173"	"19"	"0"	"0.0001476"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVnDLPVGR.[S]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.7759"	"0.0000"	"1"	"1"	"1"	"721.41449"	"1441.82170"	"1441.82121"	"0.34"	"0.00025"	"10/106"	"10"	"106"	"404300.331481934"	"HCD"	"MS2"	"16.63021"	"20.0"	"100.000"	"75.3832"	"25624"	"25624"	"25598"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.5"	""	"30.9"	""	"29.5"	""	"34.7"	""	"32.4"	"35.1"	""	"706"	"58"	"35.000"	"28.000"	"5.1972631335875E-05"	"20"	"0"	"1.434E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQGAPETLDR"	"[R].iLQGAPETLDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYG3"	"Exopolyphosphatase PRUNE1 OS=Rattus norvegicus OX=10116 GN=Prune1 PE=1 SV=1"	"Q6AYG3"	"Exopolyphosphatase PRUNE1 OS=Rattus norvegicus OX=10116 GN=Prune1 PE=1 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"721.41553"	"1441.82378"	"1441.82121"	"1.78"	"0.00128"	"12/102"	"12"	"102"	"495229.156616211"	"HCD"	"MS2"	"10.56047"	"29.5"	"100.000"	"70.0820"	"23476"	"23476"	"23453"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.2"	""	"32.7"	""	"40.7"	""	"52.8"	""	"54.4"	"55.8"	""	"693"	"36"	"35.000"	"28.000"	"0.00835032231039905"	"19"	"0"	"0.003133"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQGAPETLDR"	"[R].iLQGAPETLDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYG3"	"Exopolyphosphatase PRUNE1 OS=Rattus norvegicus OX=10116 GN=Prune1 PE=1 SV=1"	"Q6AYG3"	"Exopolyphosphatase PRUNE1 OS=Rattus norvegicus OX=10116 GN=Prune1 PE=1 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"721.41620"	"1441.82512"	"1441.82121"	"2.71"	"0.00196"	"5/102"	"5"	"102"	"492545.845703125"	"HCD"	"MS2"	"23.08108"	"30.0"	"100.000"	"70.2175"	"23517"	"23517"	"23493"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.1"	""	"35.8"	""	"40.2"	""	"51.9"	""	"55.9"	"57.6"	""	"680"	"29"	"35.000"	"28.000"	"0.0431995195770904"	"16"	"0.0001301"	"0.00402"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DITSDTSGDFR"	"[K].dITSDTSGDFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"721.85132"	"1442.69536"	"1442.69607"	"-0.49"	"-0.00035"	"8/96"	"8"	"96"	"591549.582885742"	"HCD"	"MS2"	"0"	"42.7"	"100.000"	"50.3294"	"15472"	"15472"	"15453"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.3"	""	"49.7"	""	"49.8"	""	"79.9"	""	"82.7"	"83.7"	""	"464"	"54"	"33.000"	"26.000"	"8.94309789784591E-05"	"23"	"0"	"0.0001477"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DITSDTSGDFR"	"[K].dITSDTSGDFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"721.85132"	"1442.69536"	"1442.69607"	"-0.49"	"-0.00035"	"9/96"	"9"	"96"	"1277289.31152344"	"HCD"	"MS2"	"0"	"61.2"	"100.000"	"50.9302"	"15716"	"15716"	"15699"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.4"	""	"59.5"	""	"69.1"	""	"110.9"	""	"124.3"	"117.2"	""	"464"	"56"	"33.000"	"26.000"	"5.73440001643742E-05"	"22"	"0"	"1.582E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DITSDTSGDFR"	"[K].dITSDTSGDFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8644"	"0.0000"	"1"	"1"	"1"	"721.85168"	"1442.69609"	"1442.69607"	"0.02"	"0.00001"	"9/96"	"9"	"96"	"816730.050720215"	"HCD"	"MS2"	"0"	"47.7"	"100.000"	"51.3430"	"15873"	"15873"	"15854"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"74.8"	""	"45.5"	""	"46.5"	""	"92.5"	""	"96.3"	"98.2"	""	"468"	"59"	"33.000"	"26.000"	"3.0423968125979E-05"	"25"	"0"	"1.368E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DITSDTSGDFR"	"[K].dITSDTSGDFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7541"	"0.0000"	"1"	"1"	"1"	"721.85205"	"1442.69682"	"1442.69607"	"0.52"	"0.00038"	"9/96"	"9"	"96"	"11684700.0843506"	"HCD"	"MS2"	"0"	"487.3"	"100.000"	"50.6169"	"15589"	"15589"	"15572"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"809.6"	""	"452.2"	""	"493.1"	""	"922.5"	"1.6"	"1005.1"	"939.5"	""	"472"	"61"	"33.000"	"26.000"	"1.85742806368043E-05"	""	"0"	"1.087E-05"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DITSDTSGDFR"	"[K].dITSDTSGDFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9245"	"0.0000"	"1"	"1"	"1"	"721.85223"	"1442.69719"	"1442.69607"	"0.78"	"0.00056"	"9/96"	"9"	"96"	"1802638.59521484"	"HCD"	"MS2"	"0"	"95.4"	"100.000"	"50.7444"	"15630"	"15630"	"15608"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"151.5"	""	"97.5"	""	"101.7"	""	"182.8"	""	"190.2"	"183.2"	""	"483"	"53"	"33.000"	"26.000"	"0.000109626900421024"	"20"	"0"	"3.167E-05"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DITSDTSGDFR"	"[K].dITSDTSGDFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"721.85291"	"1442.69853"	"1442.69607"	"1.71"	"0.00123"	"9/96"	"9"	"96"	"11488370.7332153"	"HCD"	"MS2"	"0"	"430.4"	"97.318"	"51.0320"	"15747"	"15747"	"15730"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"707.3"	""	"385.9"	""	"449.2"	""	"848.9"	""	"848.9"	"844.8"	""	"483"	"56"	"33.000"	"26.000"	"5.79318149943206E-05"	""	"0"	"1.504E-05"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTAMDNASK"	"[R].mTAMDNASk.[N]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"721.87286"	"1442.73845"	"1442.73836"	"0.07"	"0.00005"	"8/82"	"8"	"82"	"476525.336791992"	"HCD"	"MS2"	"0"	"38.2"	"100.000"	"32.0513"	"8047"	"8047"	"8025"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.6"	""	"54.6"	""	"65.8"	""	"45.6"	"0.9"	"71.4"	"73.5"	""	"632"	"51"	"34.000"	"28.000"	"0.000249854446447944"	"20"	"0.0003538"	"0.006555"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTAMDNASK"	"[R].mTAmDNASk.[N]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"721.87305"	"1442.73882"	"1442.73836"	"0.32"	"0.00023"	"7/82"	"7"	"82"	"334843.599487305"	"HCD"	"MS2"	"100"	"27.7"	"100.000"	"32.3749"	"8178"	"8178"	"8148"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.4"	""	"36.8"	""	"41.5"	""	"38.3"	""	"56.9"	"51.0"	""	"629"	"7"	"34.000"	"27.000"	"5.82935695563959"	"16"	"0.008641"	"0.1068"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEEVMFK"	"[R].eGEEVmFk.[T]"	"N-Term(TMT6plex); M6(Oxidation); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"1"	"721.88245"	"1442.75762"	"1442.76014"	"-1.75"	"-0.00126"	"11/62"	"11"	"62"	"391944.493164063"	"HCD"	"MS2"	"0"	"31.6"	"100.000"	"55.0185"	"17382"	"17382"	"17352"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.9"	""	"32.6"	""	"36.4"	""	"76.4"	""	"66.7"	"54.0"	""	"714"	"27"	"35.000"	"28.000"	"0.071230864644389"	""	"0.005921"	"0.06843"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEEVMFK"	"[R].eGEEVmFk.[T]"	"N-Term(TMT6plex); M6(Oxidation); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"1"	"721.88324"	"1442.75920"	"1442.76014"	"-0.65"	"-0.00047"	"7/62"	"7"	"62"	"522375.252685547"	"HCD"	"MS2"	"0"	"41.2"	"100.000"	"55.3638"	"17523"	"17523"	"17495"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.3"	""	"43.3"	""	"38.2"	""	"94.5"	""	"79.5"	"82.9"	""	"728"	"27"	"35.000"	"28.000"	"0.0729627817960918"	""	"0.007018"	"0.08192"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSVTANSK"	"[K].dYSVTANSk.[LI]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642; P42123"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"2"	"2"	"0.9245"	"0.0000"	"1"	"1"	"1"	"721.89777"	"1442.78826"	"1442.78913"	"-0.61"	"-0.00044"	"8/82"	"8"	"82"	"1375885.42816162"	"HCD"	"MS2"	"0"	"117.8"	"100.000"	"42.9489"	"12471"	"12471"	"12451"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"239.3"	""	"165.0"	""	"177.7"	""	"172.8"	""	"170.0"	"188.1"	""	"775"	"53"	"35.000"	"28.000"	"0.000200572647380845"	"20"	"0"	"0.0004656"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSVTANSK"	"[K].dYSVTANSk.[LI]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642; P42123"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"721.89777"	"1442.78826"	"1442.78913"	"-0.61"	"-0.00044"	"16/82"	"16"	"82"	"1547705.77697754"	"HCD"	"MS2"	"0"	"134.0"	"100.000"	"43.0824"	"12515"	"12515"	"12492"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"262.3"	""	"190.9"	""	"206.2"	""	"182.1"	""	"200.0"	"227.8"	""	"775"	"58"	"35.000"	"28.000"	"6.19828736088184E-05"	"20"	"0"	"0.0004156"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSVTANSK"	"[K].dYSVTANSk.[LI]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642; P42123"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"721.89795"	"1442.78862"	"1442.78913"	"-0.35"	"-0.00025"	"8/82"	"8"	"82"	"1001850.7868042"	"HCD"	"MS2"	"0"	"91.1"	"100.000"	"43.2544"	"12596"	"12596"	"12575"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"162.5"	""	"117.2"	""	"135.1"	""	"133.7"	""	"150.8"	"163.4"	""	"750"	"56"	"35.000"	"28.000"	"8.47288413832867E-05"	"22"	"0"	"0.0001439"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSVTANSK"	"[K].dYSVTANSk.[LI]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642; P42123"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.89807"	"1442.78887"	"1442.78913"	"-0.18"	"-0.00013"	"8/82"	"8"	"82"	"510050.362915039"	"HCD"	"MS2"	"0"	"51.3"	"100.000"	"43.4318"	"12658"	"12658"	"12634"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.6"	""	"62.5"	""	"76.3"	""	"73.5"	""	"91.1"	"94.7"	""	"748"	"58"	"35.000"	"28.000"	"5.59592135379319E-05"	"16"	"0"	"0.0001972"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYAEDPYK"	"[R].vYAEDPYk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"721.89984"	"1442.79241"	"1442.79315"	"-0.52"	"-0.00037"	"12/58"	"12"	"58"	"1055321.91778564"	"HCD"	"MS2"	"19.12781"	"79.1"	"100.000"	"59.2418"	"19090"	"19090"	"19064"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"126.5"	""	"101.0"	""	"110.9"	""	"112.7"	"1.4"	"142.0"	"155.2"	""	"758"	"34"	"35.000"	"28.000"	"0.0156545003254271"	"26"	"0"	"0.003456"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYAEDPYK"	"[R].vYAEDPYk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"721.90033"	"1442.79338"	"1442.79315"	"0.16"	"0.00011"	"11/58"	"11"	"58"	"872399.313171387"	"HCD"	"MS2"	"45.22245"	"72.7"	"100.000"	"58.9913"	"19003"	"19003"	"18975"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.4"	""	"109.0"	""	"102.8"	""	"108.1"	"0.3"	"131.5"	"131.4"	""	"764"	"32"	"35.000"	"28.000"	"0.0218808083836587"	"26"	"0.0007829"	"0.009427"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFSIDVGYER"	"[K].eFSIDVGYER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"722.36963"	"1443.73198"	"1443.73173"	"0.18"	"0.00013"	"9/88"	"9"	"88"	"165631.018920898"	"HCD"	"MS2"	"13.37399"	"10.7"	"100.000"	"81.9915"	"28283"	"28283"	"28258"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.8"	""	"19.5"	""	"15.1"	""	"12.9"	""	"17.5"	"17.0"	""	"623"	"25"	"34.000"	"27.000"	"0.0956000349383846"	"14"	"0.004942"	"0.05603"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTANGDYDK"	"[R].tTAnGDYDk.[K]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q9JKD6"	"Claudin-5 OS=Rattus norvegicus OX=10116 GN=Cldn5 PE=1 SV=2"	"Q9JKD6"	"Claudin-5 OS=Rattus norvegicus OX=10116 GN=Cldn5 PE=1 SV=2"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"722.37262"	"1443.73796"	"1443.73676"	"0.83"	"0.00060"	"6/88"	"6"	"88"	"310525.672363281"	"HCD"	"MS2"	"0"	"26.0"	"100.000"	"36.0156"	"9653"	"9653"	"9625"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.6"	""	"23.4"	""	"27.0"	""	"48.5"	""	"66.8"	"58.1"	""	"641"	"26"	"35.000"	"28.000"	"0.0772374689894054"	"19"	"0.003449"	"0.03472"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGVGNGTSAPVR"	"[K].eAGVGNGTSAPVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"722.38214"	"1443.75701"	"1443.77532"	"-12.69"	"-0.00916"	"4/126"	"4"	"126"	"130466.729919434"	"HCD"	"MS2"	"100"	"9.8"	"100.000"	"32.8576"	"8374"	"8374"	"8350"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.7"	""	"12.9"	""	"14.3"	""	"14.3"	""	"16.1"	"23.7"	""	"715"	"6"	"35.000"	"28.000"	"8.49720402468392"	"13"	"0.002937"	"0.02813"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSVTANSK"	"[K].dYSVTAnSk.[LI]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"2"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642; P42123"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"722.39056"	"1443.77385"	"1443.77315"	"0.49"	"0.00035"	"8/82"	"8"	"82"	"662522.382141113"	"HCD"	"MS2"	"0"	"61.5"	"100.000"	"46.5197"	"13909"	"13909"	"13884"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.8"	""	"74.1"	""	"75.6"	""	"98.0"	""	"120.8"	"113.9"	""	"765"	"54"	"35.000"	"28.000"	"0.000148809767960312"	"25"	"0"	"0.0001025"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSVTANSK"	"[K].dYSVTAnSk.[LI]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"2"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642; P42123"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"722.39124"	"1443.77519"	"1443.77315"	"1.42"	"0.00102"	"8/82"	"8"	"82"	"715566.456726074"	"HCD"	"MS2"	"0"	"68.2"	"100.000"	"46.2901"	"13827"	"13827"	"13801"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"122.2"	""	"81.3"	""	"87.2"	""	"101.9"	""	"128.0"	"130.4"	""	"771"	"53"	"35.000"	"28.000"	"0.00021678258086088"	"24"	"0"	"0.0002629"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGELNVDSLITR"	"[M].aDGELNVDSLITR.[L]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P62142"	"Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"P62142"	"Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"722.86731"	"1444.72734"	"1444.72781"	"-0.33"	"-0.00024"	"9/130"	"9"	"130"	"107317.086975098"	"HCD"	"MS2"	"13.84579"	"2.8"	"100.000"	"107.4883"	"37389"	"37389"	"37378"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.7"	""	"6.5"	""	"3.1"	""	"5.0"	""	"4.4"	"4.4"	"NoQuanLabels"	"567"	"35"	"34.000"	"27.000"	"0.00840529698930151"	"17"	"0"	"0.000548"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGELNVDSLITR"	"[M].aDGELNVDSLITR.[L]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P62142"	"Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"P62142"	"Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"722.86743"	"1444.72759"	"1444.72781"	"-0.16"	"-0.00011"	"6/130"	"6"	"130"	"151941.649597168"	"HCD"	"MS2"	"13.52609"	"3.4"	"100.000"	"107.4500"	"37450"	"37450"	"37437"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.2"	""	"3.2"	""	"4.1"	""	"8.3"	""	"7.7"	"6.3"	"NoQuanLabels"	"569"	"44"	"34.000"	"27.000"	"0.00107666915352013"	"20"	"0"	"0.0002823"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGTVDAWAGPAR"	"[R].nGTVDAWAGPAR.[V]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P13838"	"Leukosialin (Fragment) OS=Rattus norvegicus OX=10116 GN=Spn PE=1 SV=1"	"P13838"	"Leukosialin (Fragment) OS=Rattus norvegicus OX=10116 GN=Spn PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"722.87244"	"1444.73760"	"1444.73821"	"-0.42"	"-0.00031"	"8/114"	"8"	"114"	"293410.247009277"	"HCD"	"MS2"	"0"	"21.6"	"100.000"	"57.2847"	"18306"	"18306"	"18281"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.8"	""	"23.0"	""	"28.2"	""	"32.1"	""	"40.6"	"47.9"	""	"633"	"34"	"35.000"	"28.000"	"0.012716679163369"	"15"	"0"	"0.001949"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEELEQELAR"	"[R].vEELEQELAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7A4"	"Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus OX=10116 GN=Uba5 PE=1 SV=1"	"Q5M7A4"	"Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus OX=10116 GN=Uba5 PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"722.89557"	"1444.78386"	"1444.78449"	"-0.43"	"-0.00031"	"6/90"	"6"	"90"	"148973.734802246"	"HCD"	"MS2"	"26.344"	"10.0"	"100.000"	"89.7079"	"31306"	"31306"	"31286"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.3"	""	"13.3"	""	"13.3"	""	"19.5"	""	"19.9"	"14.2"	""	"809"	"34"	"36.000"	"29.000"	"0.0144184483470916"	"26"	"0"	"0.001591"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEELEQELAR"	"[R].vEELEQELAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7A4"	"Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus OX=10116 GN=Uba5 PE=1 SV=1"	"Q5M7A4"	"Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus OX=10116 GN=Uba5 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"722.89624"	"1444.78520"	"1444.78449"	"0.49"	"0.00036"	"6/90"	"6"	"90"	"91946.5853881836"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"89.9936"	"31415"	"31415"	"31402"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.4"	""	"4.6"	""	"3.6"	""	"8.2"	""	"12.4"	"13.1"	""	"807"	"25"	"36.000"	"29.000"	"0.117447435713988"	"22"	"0.001374"	"0.01654"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPLQDSGITQR"	"[R].tPLQDSGITQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVS2"	"Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Rattus norvegicus OX=10116 GN=Osgep PE=2 SV=2"	"Q9WVS2"	"Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Rattus norvegicus OX=10116 GN=Osgep PE=2 SV=2"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"722.90186"	"1444.79643"	"1444.79572"	"0.49"	"0.00036"	"9/110"	"9"	"110"	"443513.370056152"	"HCD"	"MS2"	"8.668479"	"28.7"	"100.000"	"47.0110"	"14119"	"14119"	"14094"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.4"	""	"35.4"	""	"36.5"	""	"46.7"	""	"56.9"	"54.6"	""	"860"	"29"	"36.000"	"29.000"	"0.0538850705224809"	"25"	"0"	"0.003484"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVQLTENEIR"	"[K].nVQLTENEIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62138"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1"	"P62138"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"722.90253"	"1444.79778"	"1444.79572"	"1.42"	"0.00103"	"8/96"	"8"	"96"	"1193923.12188721"	"HCD"	"MS2"	"12.08708"	"81.8"	"100.000"	"53.3970"	"16723"	"16723"	"16700"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"131.8"	""	"108.0"	""	"103.7"	""	"114.9"	""	"157.6"	"159.8"	""	"855"	"48"	"36.000"	"29.000"	"0.000746338970373516"	"21"	"0"	"0.0001879"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVQLTENEIR"	"[K].nVQLTENEIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62138"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1"	"P62138"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"722.90259"	"1444.79790"	"1444.79572"	"1.51"	"0.00109"	"8/96"	"8"	"96"	"1205429.74523926"	"HCD"	"MS2"	"6.841447"	"82.4"	"100.000"	"53.6716"	"16824"	"16824"	"16801"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"146.7"	""	"104.6"	""	"119.0"	""	"106.9"	""	"152.0"	"151.9"	""	"855"	"64"	"36.000"	"29.000"	"1.85325900510668E-05"	"22"	"0"	"2.141E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQSLLVEER"	"[R].eLQSLLVEER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O08697"	"ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus OX=10116 GN=Arl2 PE=1 SV=1"	"O08697"	"ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus OX=10116 GN=Arl2 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"722.91309"	"1444.81890"	"1444.82087"	"-1.37"	"-0.00099"	"4/102"	"4"	"102"	"101211.225830078"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"85.6720"	"29732"	"29732"	"29718"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.0"	""	"4.2"	""	"5.7"	""	"7.7"	""	"9.7"	"9.8"	""	"876"	"16"	"36.000"	"29.000"	"0.991914206725761"	"18"	"0.009417"	"0.1225"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQSLLVEER"	"[R].eLQSLLVEER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O08697"	"ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus OX=10116 GN=Arl2 PE=1 SV=1"	"O08697"	"ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus OX=10116 GN=Arl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"722.91339"	"1444.81951"	"1444.82087"	"-0.95"	"-0.00068"	"7/102"	"7"	"102"	"244286.984680176"	"HCD"	"MS2"	"0"	"14.6"	"100.000"	"85.4879"	"29662"	"29662"	"29644"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.8"	""	"13.3"	""	"18.9"	""	"22.3"	"2.8"	"30.5"	"26.3"	""	"874"	"50"	"36.000"	"29.000"	"0.000400388354183314"	"25"	"0"	"0.0004265"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQSLLVEER"	"[R].eLQSLLVEER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O08697"	"ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus OX=10116 GN=Arl2 PE=1 SV=1"	"O08697"	"ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus OX=10116 GN=Arl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"722.91357"	"1444.81987"	"1444.82087"	"-0.69"	"-0.00050"	"7/102"	"7"	"102"	"209111.791809082"	"HCD"	"MS2"	"0"	"11.9"	"100.000"	"85.3897"	"29624"	"29624"	"29608"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.4"	""	"11.4"	""	"14.0"	""	"23.6"	""	"23.3"	"24.4"	""	"861"	"39"	"36.000"	"29.000"	"0.00533301930501324"	"22"	"0"	"0.00344"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSWGEPWGER"	"[R].nSWGEPWGER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"723.85095"	"1446.69463"	"1446.69634"	"-1.19"	"-0.00086"	"8/104"	"8"	"104"	"586534.29876709"	"HCD"	"MS2"	"34.65841"	"37.1"	"100.000"	"68.4932"	"22814"	"22814"	"22789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.8"	""	"57.1"	""	"44.7"	""	"62.6"	"0.1"	"61.5"	"68.4"	""	"390"	"23"	"32.000"	"25.000"	"0.0979568049568654"	"20"	"0.0001301"	"0.003959"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSWGEPWGER"	"[R].nSWGEPWGER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"723.85132"	"1446.69536"	"1446.69634"	"-0.68"	"-0.00049"	"9/104"	"9"	"104"	"3372080.67333984"	"HCD"	"MS2"	"0"	"156.7"	"100.000"	"68.6187"	"22880"	"22880"	"22863"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"274.1"	""	"230.6"	""	"214.4"	""	"241.5"	"0.8"	"247.3"	"273.0"	""	"386"	"31"	"32.000"	"25.000"	"0.0137897790932574"	"21"	"0"	"0.0002839"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSWGEPWGER"	"[R].nSWGEPWGER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"723.85144"	"1446.69560"	"1446.69634"	"-0.51"	"-0.00037"	"5/104"	"5"	"104"	"500390.055725098"	"HCD"	"MS2"	"42.83355"	"29.3"	"100.000"	"68.3189"	"22757"	"22757"	"22735"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.8"	""	"44.1"	""	"41.8"	""	"48.3"	""	"50.4"	"52.7"	""	"386"	"2"	"32.000"	"25.000"	"13.2604208922747"	"13"	"0.006254"	"0.07102"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSWGEPWGER"	"[R].nSWGEPWGER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"723.85187"	"1446.69646"	"1446.69634"	"0.08"	"0.00006"	"9/104"	"9"	"104"	"3000976.2878418"	"HCD"	"MS2"	"0"	"156.3"	"100.000"	"68.7862"	"22934"	"22934"	"22917"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"257.3"	""	"218.6"	""	"231.7"	""	"237.2"	"0.9"	"253.9"	"278.3"	""	"386"	"35"	"32.000"	"25.000"	"0.00599180000508773"	"18"	"0"	"0.0001045"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSWGEPWGER"	"[R].nSWGEPWGER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"723.85205"	"1446.69682"	"1446.69634"	"0.33"	"0.00024"	"13/104"	"13"	"104"	"622580.207458496"	"HCD"	"MS2"	"15.05482"	"39.0"	"100.000"	"68.9391"	"23010"	"23010"	"22991"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.6"	""	"54.9"	""	"65.3"	""	"57.0"	"0.0"	"59.0"	"71.2"	""	"397"	"19"	"32.000"	"25.000"	"0.267153280280106"	"16"	"0.000936"	"0.0125"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDIAIHHPWIR"	"[-].mDIAIHHPWIR.[R]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"482.91486"	"1446.73001"	"1446.73107"	"-0.73"	"-0.00035"	"5/80"	"5"	"80"	"5131877.59020996"	"HCD"	"MS2"	"8.638109"	"29.6"	"100.000"	"59.6173"	"19243"	"19243"	"19222"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.5"	""	"34.6"	""	"32.6"	""	"48.8"	"0.6"	"65.2"	"65.0"	"NoQuanLabels"	"630"	"30"	"34.000"	"27.000"	"0.0329086869054552"	"15"	"0"	"0.002488"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDIAIHHPWIR"	"[-].mDIAIHHPWIR.[R]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"482.91495"	"1446.73029"	"1446.73107"	"-0.54"	"-0.00026"	"5/80"	"5"	"80"	"5384342.80725098"	"HCD"	"MS2"	"7.051409"	"27.6"	"100.000"	"59.3781"	"19160"	"19160"	"19142"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.3"	""	"33.6"	""	"34.6"	""	"42.6"	""	"66.1"	"55.6"	"NoQuanLabels"	"628"	"28"	"34.000"	"27.000"	"0.0530798452535985"	"15"	"0"	"0.001353"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADFSEEYK"	"[R].aDFSEEYk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13233"	"2',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Cnp PE=1 SV=2"	"P13233"	"2',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Cnp PE=1 SV=2"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"723.87982"	"1446.75237"	"1446.75168"	"0.47"	"0.00034"	"7/64"	"7"	"64"	"815050.621032715"	"HCD"	"MS2"	"0"	"84.1"	"100.000"	"59.6908"	"19273"	"19273"	"19254"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"134.2"	""	"87.2"	""	"106.0"	""	"137.6"	"0.2"	"177.5"	"155.5"	""	"838"	"26"	"36.000"	"29.000"	"0.105005977702046"	"20"	"0.0007829"	"0.009376"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADFSEEYK"	"[R].aDFSEEYk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13233"	"2',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Cnp PE=1 SV=2"	"P13233"	"2',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Cnp PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"723.88055"	"1446.75383"	"1446.75168"	"1.49"	"0.00108"	"10/64"	"10"	"64"	"680482.055969238"	"HCD"	"MS2"	"16.85591"	"65.5"	"100.000"	"59.4770"	"19201"	"19201"	"19174"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"100.2"	""	"79.5"	""	"81.3"	""	"110.3"	"1.5"	"137.5"	"111.3"	""	"859"	"18"	"36.000"	"29.000"	"0.636741517570187"	"21"	"0.004867"	"0.05205"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPALQEAYVR"	"[R].nGPALQEAYVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"723.89850"	"1446.78972"	"1446.79024"	"-0.36"	"-0.00026"	"8/100"	"8"	"100"	"765512.124267578"	"HCD"	"MS2"	"0"	"47.9"	"100.000"	"51.3520"	"15877"	"15877"	"15854"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"79.9"	""	"47.5"	""	"63.5"	""	"78.4"	""	"93.0"	"92.3"	""	"946"	"51"	"36.000"	"29.000"	"0.000391616643435934"	"16"	"0"	"1.294E-05"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVENSSTAIGIR"	"[K].aVENSSTAIGIR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"723.90833"	"1446.80937"	"1446.81137"	"-1.38"	"-0.00100"	"10/112"	"10"	"112"	"2855217.8918457"	"HCD"	"MS2"	"0"	"134.3"	"100.000"	"47.9997"	"14522"	"14522"	"14502"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"160.7"	""	"177.0"	""	"189.2"	""	"215.0"	"2.3"	"260.0"	"270.4"	""	"910"	"74"	"36.000"	"29.000"	"1.77423603937827E-06"	""	"0"	"4.167E-07"	"1.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVENSSTAIGIR"	"[K].aVENSSTAIGIR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"723.90863"	"1446.80998"	"1446.81137"	"-0.96"	"-0.00069"	"6/112"	"6"	"112"	"207430.481811523"	"HCD"	"MS2"	"0"	"17.0"	"100.000"	"49.7470"	"15235"	"15235"	"15206"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.1"	""	"23.8"	""	"26.8"	""	"29.1"	""	"28.1"	"27.3"	""	"911"	"14"	"36.000"	"29.000"	"1.65382053947781"	"16"	"0.001886"	"0.02141"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVENSSTAIGIR"	"[K].aVENSSTAIGIR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"723.90863"	"1446.80998"	"1446.81137"	"-0.96"	"-0.00069"	"7/112"	"7"	"112"	"240581.863708496"	"HCD"	"MS2"	"0"	"18.9"	"100.000"	"48.3192"	"14653"	"14653"	"14626"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.5"	""	"20.2"	""	"27.4"	""	"30.6"	""	"39.3"	"40.3"	""	"911"	"35"	"36.000"	"29.000"	"0.0133195140810764"	"20"	"0.0006732"	"0.008391"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVENSSTAIGIR"	"[K].aVENSSTAIGIR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.7564"	"0.0000"	"1"	"1"	"1"	"723.90863"	"1446.80998"	"1446.81137"	"-0.96"	"-0.00069"	"10/112"	"10"	"112"	"3082898.86346436"	"HCD"	"MS2"	"0"	"146.7"	"100.000"	"48.2683"	"14620"	"14620"	"14603"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"171.7"	""	"200.1"	""	"211.7"	""	"237.7"	"2.0"	"289.0"	"279.3"	""	"911"	"78"	"36.000"	"29.000"	"6.99018035665079E-07"	""	"0"	"3.525E-07"	"1.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVENSSTAIGIR"	"[K].aVENSSTAIGIR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"723.90936"	"1446.81145"	"1446.81137"	"0.05"	"0.00004"	"10/112"	"10"	"112"	"546566.030639648"	"HCD"	"MS2"	"0"	"31.2"	"100.000"	"48.5576"	"14737"	"14737"	"14717"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.6"	""	"32.7"	""	"43.2"	""	"51.4"	"0.5"	"64.4"	"61.8"	""	"886"	"76"	"36.000"	"29.000"	"1.22012331557881E-06"	"29"	"0"	"1.177E-06"	"1.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADIDQEVK"	"[K].aADIDQEVk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.7414"	"0.0000"	"1"	"1"	"1"	"723.91382"	"1446.82036"	"1446.82043"	"-0.05"	"-0.00003"	"16/78"	"16"	"78"	"2440147.40777588"	"HCD"	"MS2"	"1.51064"	"189.3"	"100.000"	"51.4874"	"15943"	"15943"	"15925"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"320.3"	""	"207.4"	""	"224.9"	""	"324.1"	"0.4"	"351.1"	"365.1"	""	"840"	"58"	"36.000"	"29.000"	"7.38327917862651E-05"	""	"0"	"0.0003168"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADIDQEVK"	"[K].aADIDQEVk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.7674"	"0.0000"	"1"	"1"	"1"	"482.94507"	"1446.82065"	"1446.82043"	"0.15"	"0.00007"	"7/78"	"7"	"78"	"1992153.07977295"	"HCD"	"MS2"	"17.76488"	"77.2"	"100.000"	"51.4343"	"15922"	"15922"	"15893"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"108.2"	""	"79.0"	""	"100.5"	""	"134.7"	""	"154.2"	"157.2"	""	"840"	"43"	"36.000"	"29.000"	"0.00210014504690331"	"26"	"0.0002479"	"0.005778"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADIDQEVK"	"[K].aADIDQEVk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.7455"	"0.0000"	"1"	"1"	"1"	"723.91418"	"1446.82109"	"1446.82043"	"0.46"	"0.00033"	"16/78"	"16"	"78"	"2483790.25744629"	"HCD"	"MS2"	"0"	"199.0"	"100.000"	"51.8475"	"16079"	"16079"	"16059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"343.5"	""	"197.3"	""	"242.0"	""	"335.7"	""	"375.1"	"392.2"	""	"838"	"55"	"36.000"	"29.000"	"0.000122240191886649"	"29"	"0"	"0.0001617"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADIDQEVK"	"[K].aADIDQEVk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"723.91437"	"1446.82146"	"1446.82043"	"0.71"	"0.00051"	"7/78"	"7"	"78"	"473307.095031738"	"HCD"	"MS2"	"22.46382"	"37.6"	"100.000"	"52.1574"	"16206"	"16206"	"16179"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.4"	""	"51.4"	""	"39.1"	""	"56.5"	""	"74.1"	"83.7"	""	"842"	"12"	"36.000"	"29.000"	"2.87926803505482"	"18"	"0.000936"	"0.01334"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGQDGLSGVK"	"[K].qGQDGLSGVk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"0"	"2"	"2"	"0.8955"	"0.0000"	"1"	"1"	"1"	"723.91919"	"1446.83110"	"1446.83166"	"-0.39"	"-0.00028"	"9/96"	"9"	"96"	"1000008.71844482"	"HCD"	"MS2"	"0"	"87.7"	"100.000"	"43.3371"	"12630"	"12630"	"12607"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"131.5"	""	"92.3"	""	"117.7"	""	"173.6"	"1.8"	"153.4"	"160.6"	""	"848"	"67"	"36.000"	"29.000"	"8.57760131759588E-06"	"24"	"0"	"4.478E-05"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGQDGLSGVK"	"[K].qGQDGLSGVk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"723.91919"	"1446.83110"	"1446.83166"	"-0.39"	"-0.00028"	"8/96"	"8"	"96"	"780554.385437012"	"HCD"	"MS2"	"100"	"80.4"	"100.000"	"43.4065"	"12648"	"12648"	"12618"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.9"	""	"82.7"	""	"104.6"	""	"162.1"	"0.3"	"164.9"	"143.3"	""	"848"	"34"	"36.000"	"29.000"	"0.0173526519725525"	"18"	"0"	"0.0003708"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELEEVIK"	"[K].eELEEVIk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"0"	"2"	"2"	"0.5854"	"0.0000"	"1"	"1"	"1"	"723.92584"	"1446.84441"	"1446.84558"	"-0.81"	"-0.00059"	"14/64"	"14"	"64"	"361819.605041504"	"HCD"	"MS2"	"16.7755"	"30.1"	"100.000"	"78.5474"	"26895"	"26895"	"26868"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.0"	""	"18.3"	""	"29.5"	""	"57.3"	"0.4"	"74.1"	"88.6"	""	"911"	"41"	"36.000"	"29.000"	"0.00325453076527396"	""	"0"	"0.0009991"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELEEVIK"	"[K].eELEEVIk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"723.92633"	"1446.84538"	"1446.84558"	"-0.14"	"-0.00010"	"7/64"	"7"	"64"	"350440.952392578"	"HCD"	"MS2"	"100"	"28.0"	"100.000"	"78.5172"	"26888"	"26888"	"26863"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.0"	""	"27.6"	""	"27.3"	""	"50.2"	""	"78.5"	"67.9"	""	"925"	"34"	"36.000"	"29.000"	"0.0191916244718393"	"29"	"0"	"0.002492"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RSDVEAIAK"	"[R].rSDVEAIAk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYA6"	"Cytochrome b-245 chaperone 1 OS=Rattus norvegicus OX=10116 GN=Cybc1 PE=1 SV=1"	"Q6AYA6"	"Cytochrome b-245 chaperone 1 OS=Rattus norvegicus OX=10116 GN=Cybc1 PE=1 SV=1"	"1"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"482.96057"	"1446.86716"	"1446.86805"	"-0.61"	"-0.00030"	"6/86"	"6"	"86"	"2181898.78112793"	"HCD"	"MS2"	"65.32438"	"100.4"	"100.000"	"38.6477"	"10719"	"10719"	"10688"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"143.5"	""	"115.0"	""	"126.5"	""	"166.5"	"0.2"	"202.5"	"198.7"	""	"799"	"28"	"36.000"	"29.000"	"0.0647913133894893"	"28"	"0.001311"	"0.01576"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RSDVEAIAK"	"[R].rSDVEAIAk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYA6"	"Cytochrome b-245 chaperone 1 OS=Rattus norvegicus OX=10116 GN=Cybc1 PE=1 SV=1"	"Q6AYA6"	"Cytochrome b-245 chaperone 1 OS=Rattus norvegicus OX=10116 GN=Cybc1 PE=1 SV=1"	"1"	"3"	"3"	"0.4500"	"0.0000"	"1"	"1"	"1"	"482.96072"	"1446.86762"	"1446.86805"	"-0.30"	"-0.00014"	"6/86"	"6"	"86"	"2130259.54510498"	"HCD"	"MS2"	"46.85204"	"100.5"	"100.000"	"38.8716"	"10801"	"10801"	"10773"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"142.0"	""	"125.6"	""	"124.8"	""	"163.5"	""	"193.1"	"205.4"	""	"799"	"20"	"36.000"	"29.000"	"0.371122071518585"	"25"	"0.002147"	"0.02286"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSWGEPWGER"	"[R].nSWGEPWGER.[G]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"724.34351"	"1447.67974"	"1447.68036"	"-0.43"	"-0.00031"	"11/104"	"11"	"104"	"572723.656005859"	"HCD"	"MS2"	"34.8597"	"30.2"	"100.000"	"76.4957"	"26074"	"26074"	"26050"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.3"	""	"39.1"	""	"41.5"	""	"48.4"	"1.2"	"52.9"	"60.8"	""	"331"	"10"	"32.000"	"25.000"	"1.8063337568227"	"15"	"0.006958"	"0.08076"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSWGEPWGER"	"[R].nSWGEPWGER.[G]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.34387"	"1447.68047"	"1447.68036"	"0.07"	"0.00005"	"11/104"	"11"	"104"	"514777.159057617"	"HCD"	"MS2"	"44.77495"	"27.5"	"100.000"	"76.5799"	"26100"	"26100"	"26072"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.5"	""	"37.3"	""	"35.2"	""	"41.8"	""	"48.6"	"57.6"	""	"333"	"11"	"32.000"	"25.000"	"1.32866115430118"	"13"	"0.001211"	"0.01439"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPEDAADMAR"	"[R].nIPEDAADmAR.[L]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.35669"	"1447.70610"	"1447.70486"	"0.86"	"0.00062"	"7/108"	"7"	"108"	"230262.530700684"	"HCD"	"MS2"	"37.23544"	"17.1"	"100.000"	"40.1359"	"11317"	"11317"	"11289"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.0"	""	"19.9"	""	"24.3"	""	"32.5"	""	"30.6"	"31.7"	""	"507"	"17"	"34.000"	"27.000"	"0.514017569398645"	"14"	"0.004022"	"0.04334"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPECPGPEK"	"[R].sPEcPGPEk.[Q]"	"N-Term(TMT6plex); C4(Methylthio); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"724.36938"	"1447.73149"	"1447.73254"	"-0.73"	"-0.00053"	"7/78"	"7"	"78"	"1098041.9420166"	"HCD"	"MS2"	"0"	"83.6"	"100.000"	"53.0518"	"16582"	"16582"	"16561"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"126.2"	""	"133.9"	""	"120.6"	""	"90.6"	""	"163.3"	"163.6"	""	"714"	"37"	"35.000"	"28.000"	"0.00691302641128938"	"15"	"0.005829"	"0.06498"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPECPGPEK"	"[R].sPEcPGPEk.[Q]"	"N-Term(TMT6plex); C4(Methylthio); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"483.24869"	"1447.73151"	"1447.73254"	"-0.71"	"-0.00034"	"9/78"	"9"	"78"	"1768235.18676758"	"HCD"	"MS2"	"15.68655"	"64.5"	"100.000"	"53.2474"	"16662"	"16662"	"16637"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.1"	""	"100.1"	""	"91.3"	""	"92.8"	""	"113.9"	"132.3"	""	"714"	"26"	"35.000"	"28.000"	"0.0874315577338574"	"19"	"0.0003538"	"0.006558"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPECPGPEK"	"[R].sPEcPGPEk.[Q]"	"N-Term(TMT6plex); C4(Methylthio); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"483.24875"	"1447.73169"	"1447.73254"	"-0.59"	"-0.00028"	"9/78"	"9"	"78"	"1937068.05169678"	"HCD"	"MS2"	"10.16545"	"70.8"	"100.000"	"53.5219"	"16763"	"16763"	"16738"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.4"	""	"97.7"	""	"103.3"	""	"102.7"	"0.2"	"132.0"	"147.8"	""	"714"	"27"	"35.000"	"28.000"	"0.065564418857536"	"20"	"0"	"0.001946"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPECPGPEK"	"[R].sPEcPGPEk.[Q]"	"N-Term(TMT6plex); C4(Methylthio); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.36963"	"1447.73198"	"1447.73254"	"-0.39"	"-0.00028"	"7/78"	"7"	"78"	"1016217.22924805"	"HCD"	"MS2"	"22.69258"	"76.1"	"100.000"	"53.3265"	"16683"	"16683"	"16658"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"111.8"	""	"128.8"	""	"113.2"	""	"82.7"	""	"135.6"	"149.5"	""	"714"	"35"	"35.000"	"28.000"	"0.0105115852326616"	"15"	"0.001374"	"0.018"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPECPGPEK"	"[R].sPEcPGPEk.[Q]"	"N-Term(TMT6plex); C4(Methylthio); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.37048"	"1447.73369"	"1447.73254"	"0.79"	"0.00057"	"7/78"	"7"	"78"	"612988.657714844"	"HCD"	"MS2"	"7.76748"	"49.8"	"100.000"	"53.6370"	"16810"	"16810"	"16785"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.9"	""	"71.3"	""	"71.4"	""	"59.0"	"0.9"	"89.6"	"111.0"	""	"716"	"34"	"35.000"	"28.000"	"0.0129981943607696"	"15"	"0.007339"	"0.08412"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQFGSEVELR"	"[R].gPQFGSEVELR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.5909"	"0.0000"	"1"	"1"	"1"	"483.26227"	"1447.77225"	"1447.77426"	"-1.39"	"-0.00067"	"13/102"	"13"	"102"	"596141.831787109"	"HCD"	"MS2"	"8.659169"	"19.5"	"100.000"	"66.0479"	"21832"	"21832"	"21812"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.6"	""	"23.6"	""	"21.5"	""	"38.7"	""	"36.9"	"40.2"	""	"914"	"44"	"36.000"	"29.000"	"0.00170183009758338"	""	"0"	"0.0007062"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQFGSEVELR"	"[R].gPQFGSEVELR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.5323"	"0.0000"	"1"	"1"	"1"	"483.26239"	"1447.77262"	"1447.77426"	"-1.13"	"-0.00055"	"8/102"	"8"	"102"	"745284.670593262"	"HCD"	"MS2"	"4.807299"	"19.0"	"100.000"	"66.0977"	"21837"	"21837"	"21816"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.6"	""	"19.5"	""	"25.7"	""	"32.2"	""	"38.7"	"41.8"	""	"921"	"62"	"36.000"	"29.000"	"2.76203790615662E-05"	""	"0"	"0.0001006"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQFGSEVELR"	"[R].gPQFGSEVELR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"724.39001"	"1447.77275"	"1447.77426"	"-1.04"	"-0.00075"	"8/102"	"8"	"102"	"518277.148376465"	"HCD"	"MS2"	"17.72293"	"33.6"	"100.000"	"66.1952"	"21892"	"21892"	"21873"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.8"	""	"39.8"	""	"36.7"	""	"57.3"	"1.0"	"73.5"	"78.5"	""	"924"	"36"	"36.000"	"29.000"	"0.0127832704018012"	""	"0"	"0.001706"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQFGSEVELR"	"[R].gPQFGSEVELR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.5273"	"0.0000"	"1"	"1"	"1"	"483.26254"	"1447.77307"	"1447.77426"	"-0.82"	"-0.00039"	"8/102"	"8"	"102"	"2035382.41479492"	"HCD"	"MS2"	"24.42468"	"34.8"	"100.000"	"65.7391"	"21706"	"21706"	"21686"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.9"	""	"37.9"	""	"46.4"	""	"59.4"	"0.6"	"70.4"	"72.5"	""	"924"	"55"	"36.000"	"29.000"	"0.000161302825751107"	""	"0"	"0.0001715"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQFGSEVELR"	"[R].gPQFGSEVELR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.4130"	"0.0000"	"1"	"1"	"1"	"724.39044"	"1447.77361"	"1447.77426"	"-0.45"	"-0.00033"	"10/102"	"10"	"102"	"5771010.13244629"	"HCD"	"MS2"	"0"	"260.4"	"100.000"	"65.8841"	"21766"	"21766"	"21749"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"217.3"	""	"282.2"	""	"270.5"	""	"454.8"	"1.4"	"623.0"	"632.4"	""	"924"	"46"	"36.000"	"29.000"	"0.00115782247490084"	""	"0"	"2.92E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQFGSEVELR"	"[R].gPQFGSEVELR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.3409"	"0.0000"	"1"	"1"	"1"	"724.39044"	"1447.77361"	"1447.77426"	"-0.45"	"-0.00033"	"10/102"	"10"	"102"	"5328680.46618652"	"HCD"	"MS2"	"0"	"243.4"	"100.000"	"65.9709"	"21786"	"21786"	"21769"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"202.2"	""	"266.2"	""	"232.3"	""	"414.6"	""	"571.6"	"633.7"	""	"924"	"44"	"36.000"	"29.000"	"0.00179738856987358"	""	"0"	"4.226E-05"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQFGSEVELR"	"[R].gPQFGSEVELR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.7027"	"0.0000"	"1"	"1"	"1"	"483.26273"	"1447.77362"	"1447.77426"	"-0.44"	"-0.00021"	"8/102"	"8"	"102"	"1519463.80310059"	"HCD"	"MS2"	"84.97394"	"29.3"	"100.000"	"65.8002"	"21716"	"21716"	"21692"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.3"	""	"35.6"	""	"35.8"	""	"48.5"	""	"62.5"	"68.6"	""	"924"	"37"	"36.000"	"29.000"	"0.00864255148849"	"26"	"0"	"0.0002657"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQFGSEVELR"	"[R].gPQFGSEVELR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"724.39056"	"1447.77385"	"1447.77426"	"-0.28"	"-0.00020"	"8/102"	"8"	"102"	"425214.32989502"	"HCD"	"MS2"	"12.53604"	"26.7"	"100.000"	"66.3005"	"21920"	"21920"	"21896"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.3"	""	"35.1"	""	"27.5"	""	"46.9"	""	"57.1"	"64.2"	""	"943"	"35"	"36.000"	"29.000"	"0.0139791800016073"	"27"	"0"	"0.001615"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQFGSEVELR"	"[R].gPQFGSEVELR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"724.39075"	"1447.77422"	"1447.77426"	"-0.03"	"-0.00002"	"8/102"	"8"	"102"	"2805065.90814209"	"HCD"	"MS2"	"39.74443"	"162.7"	"100.000"	"65.5796"	"21641"	"21641"	"21624"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"148.5"	""	"184.6"	""	"167.0"	""	"313.1"	""	"357.1"	"380.2"	""	"939"	"36"	"36.000"	"29.000"	"0.0125497650886743"	""	"0"	"1.697E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQFGSEVELR"	"[R].gPQFGSEVELR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"724.39172"	"1447.77617"	"1447.77426"	"1.32"	"0.00096"	"10/102"	"10"	"102"	"2893356.5982666"	"HCD"	"MS2"	"31.19558"	"169.0"	"100.000"	"65.6689"	"21662"	"21662"	"21644"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"144.7"	""	"177.7"	""	"185.3"	""	"325.9"	"0.9"	"378.0"	"395.9"	""	"957"	"36"	"36.000"	"29.000"	"0.0111399166679271"	""	"0"	"4.533E-05"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGTDIQDNK"	"[K].vGTDIQDNk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"724.41089"	"1447.81450"	"1447.81568"	"-0.81"	"-0.00059"	"12/78"	"12"	"78"	"855607.994567871"	"HCD"	"MS2"	"22.57871"	"78.4"	"100.000"	"46.3637"	"13845"	"13845"	"13821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"143.2"	""	"81.2"	""	"105.8"	""	"134.8"	""	"134.1"	"143.2"	""	"964"	"33"	"36.000"	"29.000"	"0.0234448273143284"	"21"	"0"	"0.0004794"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGTDIQDNK"	"[K].vGTDIQDNk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"483.27640"	"1447.81464"	"1447.81568"	"-0.72"	"-0.00035"	"9/78"	"9"	"78"	"866927.941711426"	"HCD"	"MS2"	"80.953"	"41.5"	"100.000"	"46.2234"	"13800"	"13800"	"13769"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.9"	""	"52.1"	""	"51.2"	""	"68.8"	""	"77.8"	"85.5"	""	"964"	"10"	"36.000"	"29.000"	"4.41618276238804"	"13"	"0.008522"	"0.1051"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNDSGTPVAK"	"[K].tNDSGTPVAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"724.41144"	"1447.81560"	"1447.81568"	"-0.05"	"-0.00004"	"7/98"	"7"	"98"	"466325.361877441"	"HCD"	"MS2"	"100"	"42.6"	"100.000"	"33.4044"	"8590"	"8590"	"8566"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.9"	""	"54.0"	""	"57.8"	""	"78.9"	"1.4"	"84.6"	"71.2"	""	"962"	"21"	"36.000"	"29.000"	"0.350869062432448"	"19"	"0.0001301"	"0.004537"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNDSGTPVAK"	"[K].tNDSGTPVAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"724.41156"	"1447.81584"	"1447.81568"	"0.11"	"0.00008"	"8/98"	"8"	"98"	"811794.270324707"	"HCD"	"MS2"	"0"	"70.5"	"100.000"	"33.4272"	"8606"	"8606"	"8583"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.5"	""	"79.8"	""	"104.9"	""	"134.1"	""	"126.4"	"123.1"	""	"961"	"49"	"36.000"	"29.000"	"0.000678724290191233"	"29"	"0"	"3.665E-05"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGTDIQDNK"	"[K].vGTDIQDNk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"483.27689"	"1447.81610"	"1447.81568"	"0.29"	"0.00014"	"8/78"	"8"	"78"	"1006475.11212158"	"HCD"	"MS2"	"45.37452"	"54.5"	"100.000"	"46.4165"	"13867"	"13867"	"13836"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.0"	""	"66.1"	""	"59.7"	""	"100.7"	""	"102.4"	"105.4"	""	"961"	"12"	"36.000"	"29.000"	"3.1600459084928"	"14"	"0.004938"	"0.05261"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EKVESELR"	"[R].ekVESELR.[S]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P68255"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1"	"P68255"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1"	"1"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"483.28867"	"1447.85144"	"1447.85206"	"-0.43"	"-0.00021"	"5/78"	"5"	"78"	"13000432.2788696"	"HCD"	"MS2"	"6.379198"	"596.1"	"100.000"	"35.6871"	"9515"	"9515"	"9498"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1033.7"	""	"659.0"	""	"702.2"	""	"1062.1"	""	"1120.7"	"1076.6"	""	"842"	"8"	"36.000"	"29.000"	"6.67240034026128"	"17"	"0.005921"	"0.06886"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPDDPEHLAAR"	"[K].vPDDPEHLAAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"3"	"3"	"0.8545"	"0.0000"	"1"	"1"	"1"	"483.59427"	"1448.76825"	"1448.76951"	"-0.87"	"-0.00042"	"8/86"	"8"	"86"	"8920832.37475586"	"HCD"	"MS2"	"49.83181"	"115.3"	"98.983"	"45.9585"	"13679"	"13679"	"13661"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"179.0"	""	"166.4"	""	"167.1"	""	"137.9"	"1.4"	"209.9"	"231.1"	""	"856"	"55"	"36.000"	"29.000"	"0.000123436548333819"	"24"	"0"	"9.312E-06"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPDDPEHLAAR"	"[K].vPDDPEHLAAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"483.59470"	"1448.76953"	"1448.76951"	"0.02"	"0.00001"	"8/86"	"8"	"86"	"9027849.21789551"	"HCD"	"MS2"	"46.49064"	"123.5"	"100.000"	"45.8021"	"13628"	"13628"	"13611"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"178.0"	""	"184.0"	""	"188.7"	""	"158.2"	"6.7"	"216.9"	"236.8"	""	"895"	"50"	"36.000"	"29.000"	"0.000416670774271854"	"21"	"0"	"4.594E-05"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALNGILQGFR"	"[K].eALnGILqGFR.[V]"	"N-Term(TMT6plex); N4(Deamidated); Q8(Deamidated)"	"1"	"1"	"Q8VHZ8"	"Down syndrome cell adhesion molecule homolog OS=Rattus norvegicus OX=10116 GN=Dscam PE=1 SV=1"	"Q8VHZ8"	"Down syndrome cell adhesion molecule homolog OS=Rattus norvegicus OX=10116 GN=Dscam PE=1 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"3"	"724.90045"	"1448.79363"	"1448.79466"	"-0.71"	"-0.00052"	"6/94"	"6"	"94"	"321712.356018066"	"HCD"	"MS2"	"0"	"17.0"	"100.000"	"70.8011"	"23755"	"23755"	"23733"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.3"	""	"18.2"	""	"30.7"	""	"24.6"	""	"30.0"	"27.0"	""	"981"	"13"	"36.000"	"29.000"	"2.45832338094177"	"21"	"0.004867"	"0.05225"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALNGILQGFR"	"[K].eALnGILqGFR.[V]"	"N-Term(TMT6plex); N4(Deamidated); Q8(Deamidated)"	"1"	"1"	"Q8VHZ8"	"Down syndrome cell adhesion molecule homolog OS=Rattus norvegicus OX=10116 GN=Dscam PE=1 SV=1"	"Q8VHZ8"	"Down syndrome cell adhesion molecule homolog OS=Rattus norvegicus OX=10116 GN=Dscam PE=1 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"3"	"724.90057"	"1448.79387"	"1448.79466"	"-0.55"	"-0.00040"	"6/94"	"6"	"94"	"616634.560058594"	"HCD"	"MS2"	"0"	"29.7"	"100.000"	"70.3451"	"23583"	"23583"	"23560"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.9"	""	"36.2"	""	"41.4"	""	"52.7"	""	"48.3"	"54.1"	""	"981"	"13"	"36.000"	"29.000"	"2.58011469164641"	"21"	"0.006685"	"0.07487"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALNGILQGFR"	"[K].eALnGILqGFR.[V]"	"N-Term(TMT6plex); N4(Deamidated); Q8(Deamidated)"	"1"	"1"	"Q8VHZ8"	"Down syndrome cell adhesion molecule homolog OS=Rattus norvegicus OX=10116 GN=Dscam PE=1 SV=1"	"Q8VHZ8"	"Down syndrome cell adhesion molecule homolog OS=Rattus norvegicus OX=10116 GN=Dscam PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"3"	"724.90106"	"1448.79485"	"1448.79466"	"0.13"	"0.00009"	"6/94"	"6"	"94"	"395770.274902344"	"HCD"	"MS2"	"0"	"20.5"	"100.000"	"70.6426"	"23704"	"23704"	"23685"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.5"	""	"26.1"	""	"30.2"	""	"31.1"	""	"36.3"	"39.5"	""	"995"	"14"	"36.000"	"29.000"	"1.78152977458562"	"22"	"0.006505"	"0.07336"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALNGILQGFR"	"[K].eALnGILqGFR.[V]"	"N-Term(TMT6plex); N4(Deamidated); Q8(Deamidated)"	"1"	"1"	"Q8VHZ8"	"Down syndrome cell adhesion molecule homolog OS=Rattus norvegicus OX=10116 GN=Dscam PE=1 SV=1"	"Q8VHZ8"	"Down syndrome cell adhesion molecule homolog OS=Rattus norvegicus OX=10116 GN=Dscam PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"3"	"724.90149"	"1448.79570"	"1448.79466"	"0.72"	"0.00052"	"6/94"	"6"	"94"	"645106.786437988"	"HCD"	"MS2"	"0"	"30.6"	"100.000"	"70.4944"	"23630"	"23630"	"23605"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.2"	""	"43.3"	""	"44.4"	""	"49.7"	""	"47.4"	"52.7"	""	"992"	"14"	"36.000"	"29.000"	"1.79259291869248"	"22"	"0.005874"	"0.06667"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAEVELQSK"	"[R].sAEVELQSk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"724.92096"	"1448.83464"	"1448.83608"	"-0.99"	"-0.00072"	"8/82"	"8"	"82"	"974309.791931152"	"HCD"	"MS2"	"0"	"79.9"	"100.000"	"49.1732"	"15001"	"15001"	"14976"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"114.4"	""	"102.2"	""	"110.6"	""	"111.1"	"0.3"	"142.8"	"176.4"	""	"988"	"47"	"36.000"	"29.000"	"0.0010202977969704"	"24"	"0"	"0.0003605"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGTAEVELK"	"[K].gSGTAEVELk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.2353"	"0.0000"	"1"	"1"	"1"	"483.61646"	"1448.83481"	"1448.83608"	"-0.88"	"-0.00042"	"7/84"	"7"	"84"	"3137270.64251709"	"HCD"	"MS2"	"19.62176"	"108.4"	"100.000"	"49.9589"	"15321"	"15321"	"15302"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"136.0"	""	"128.8"	""	"138.0"	""	"190.4"	""	"207.6"	"229.8"	""	"965"	"34"	"36.000"	"29.000"	"0.0198837052964462"	""	"0"	"0.00226"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGTAEVELK"	"[K].gSGTAEVELk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"483.61664"	"1448.83536"	"1448.83608"	"-0.50"	"-0.00024"	"8/84"	"8"	"84"	"2585966.64080811"	"HCD"	"MS2"	"19.91789"	"94.0"	"100.000"	"50.2534"	"15441"	"15441"	"15424"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"112.4"	""	"110.4"	""	"118.8"	""	"138.6"	""	"203.0"	"211.2"	""	"948"	"32"	"36.000"	"29.000"	"0.0275916925223393"	""	"0"	"0.0004327"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGTAEVELK"	"[K].gSGTAEVELk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"724.92139"	"1448.83550"	"1448.83608"	"-0.40"	"-0.00029"	"9/84"	"9"	"84"	"5917352.41168213"	"HCD"	"MS2"	"0"	"428.4"	"100.000"	"50.2121"	"15425"	"15425"	"15408"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"508.1"	""	"456.1"	""	"556.7"	""	"625.9"	""	"910.2"	"1019.6"	""	"948"	"52"	"36.000"	"29.000"	"0.000295650312018667"	""	"0"	"0.0001291"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGTAEVELK"	"[K].gSGTAEVELk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.3902"	"0.0000"	"1"	"1"	"1"	"724.92157"	"1448.83586"	"1448.83608"	"-0.15"	"-0.00011"	"13/84"	"13"	"84"	"460884.278259277"	"HCD"	"MS2"	"0"	"42.2"	"100.000"	"50.5247"	"15551"	"15551"	"15529"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"62.3"	""	"49.4"	""	"48.6"	""	"67.0"	""	"83.8"	"92.6"	""	"945"	"41"	"36.000"	"29.000"	"0.0038317909983594"	""	"0"	"0.002919"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGTAEVELK"	"[K].gSGTAEVELk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.1892"	"0.0000"	"1"	"1"	"1"	"483.61685"	"1448.83600"	"1448.83608"	"-0.05"	"-0.00003"	"8/84"	"8"	"84"	"2692472.82122803"	"HCD"	"MS2"	"29.69544"	"91.1"	"100.000"	"50.3238"	"15458"	"15458"	"15438"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"106.8"	""	"101.5"	""	"127.0"	""	"155.1"	"2.7"	"176.1"	"195.4"	""	"945"	"37"	"36.000"	"29.000"	"0.00851925882556146"	""	"0"	"0.0005106"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGTAEVELK"	"[K].gSGTAEVELk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.5439"	"0.0000"	"1"	"1"	"1"	"724.92169"	"1448.83611"	"1448.83608"	"0.02"	"0.00001"	"16/84"	"16"	"84"	"3185582.67456055"	"HCD"	"MS2"	"0"	"248.9"	"100.000"	"49.9198"	"15305"	"15305"	"15286"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"309.0"	""	"281.7"	""	"287.0"	""	"431.9"	""	"504.5"	"553.2"	""	"941"	"57"	"36.000"	"29.000"	"0.000103647690086665"	""	"0"	"7.127E-05"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGTAEVELK"	"[K].gSGTAEVELk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.5763"	"0.0000"	"1"	"1"	"1"	"724.92188"	"1448.83647"	"1448.83608"	"0.27"	"0.00020"	"16/84"	"16"	"84"	"2920678.3949585"	"HCD"	"MS2"	"0"	"228.2"	"100.000"	"50.2848"	"15442"	"15442"	"15422"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"282.0"	""	"270.5"	""	"272.9"	""	"377.2"	""	"461.9"	"503.4"	""	"940"	"59"	"36.000"	"29.000"	"6.01309212954036E-05"	""	"0"	"4.419E-05"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGTAEVELK"	"[K].gSGTAEVELk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"724.92206"	"1448.83684"	"1448.83608"	"0.52"	"0.00038"	"8/84"	"8"	"84"	"5185372.86352539"	"HCD"	"MS2"	"0"	"389.3"	"100.000"	"50.5927"	"15568"	"15568"	"15550"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"444.7"	""	"440.7"	""	"458.1"	""	"608.1"	""	"836.6"	"916.7"	""	"942"	"51"	"36.000"	"29.000"	"0.000366455215539747"	""	"0"	"0.0001209"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAEVELQSK"	"[R].sAEVELQSk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6981"	"0.0000"	"1"	"1"	"1"	"724.92218"	"1448.83708"	"1448.83608"	"0.69"	"0.00050"	"8/82"	"8"	"82"	"974760.031982422"	"HCD"	"MS2"	"0"	"79.7"	"100.000"	"49.5909"	"15159"	"15159"	"15137"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"114.7"	""	"101.6"	""	"121.9"	""	"103.3"	""	"136.6"	"178.5"	""	"974"	"53"	"36.000"	"29.000"	"0.00025499341261726"	""	"0"	"0.0002154"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFQEEYYR"	"[K].dAFQEEYYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q924S1"	"1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Rattus norvegicus OX=10116 GN=Agpat4 PE=2 SV=1"	"Q924S1"	"1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Rattus norvegicus OX=10116 GN=Agpat4 PE=2 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"725.34607"	"1449.68486"	"1449.68478"	"0.06"	"0.00004"	"6/84"	"6"	"84"	"473529.396972656"	"HCD"	"MS2"	"41.78645"	"32.4"	"100.000"	"58.5511"	"18808"	"18808"	"18783"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.9"	""	"32.6"	""	"40.8"	""	"66.9"	"0.3"	"63.1"	"63.3"	""	"361"	"33"	"32.000"	"25.000"	"0.00815599979596735"	"22"	"0"	"0.0003791"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFQEEYYR"	"[K].dAFQEEYYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q924S1"	"1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Rattus norvegicus OX=10116 GN=Agpat4 PE=2 SV=1"	"Q924S1"	"1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Rattus norvegicus OX=10116 GN=Agpat4 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"725.34692"	"1449.68657"	"1449.68478"	"1.24"	"0.00090"	"7/84"	"7"	"84"	"656096.345947266"	"HCD"	"MS2"	"69.507"	"40.3"	"100.000"	"58.2798"	"18712"	"18712"	"18687"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.0"	""	"42.4"	""	"44.8"	""	"71.6"	"1.5"	"83.6"	"92.3"	""	"369"	"19"	"32.000"	"25.000"	"0.234961318447574"	"14"	"0"	"0.001102"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLR"	"[R].mSVEADINGLR.[R]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.3256"	"0.0000"	"1"	"1"	"1"	"483.92307"	"1449.75464"	"1449.75689"	"-1.55"	"-0.00075"	"11/94"	"11"	"94"	"1290989.20556641"	"HCD"	"MS2"	"13.39979"	"18.7"	"100.000"	"62.6948"	"20473"	"20473"	"20449"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.4"	""	"17.8"	""	"18.3"	""	"40.9"	""	"39.5"	"42.4"	""	"787"	"43"	"35.000"	"28.000"	"0.00217242472356978"	""	"0"	"0.0005841"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLR"	"[R].mSVEADINGLR.[R]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"725.38098"	"1449.75469"	"1449.75689"	"-1.52"	"-0.00110"	"10/94"	"10"	"94"	"652507.581848145"	"HCD"	"MS2"	"0"	"32.5"	"100.000"	"62.3381"	"20312"	"20312"	"20293"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.3"	""	"33.4"	""	"36.7"	""	"68.5"	""	"65.8"	"72.4"	""	"802"	"40"	"36.000"	"29.000"	"0.0039187212560328"	"26"	"0.001374"	"0.01612"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLR"	"[R].mSVEADINGLR.[R]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.3265"	"0.0000"	"1"	"1"	"1"	"483.92322"	"1449.75510"	"1449.75689"	"-1.24"	"-0.00060"	"13/94"	"13"	"94"	"871341.264404297"	"HCD"	"MS2"	"12.4101"	"14.9"	"100.000"	"62.9129"	"20546"	"20546"	"20522"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.5"	""	"16.1"	""	"17.7"	""	"31.7"	""	"32.1"	"31.9"	""	"816"	"49"	"36.000"	"29.000"	"0.000574989829756125"	""	"0"	"0.0002858"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLR"	"[R].mSVEADINGLR.[R]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"725.38208"	"1449.75688"	"1449.75689"	"-0.01"	"-0.00001"	"10/94"	"10"	"94"	"1699316.82080078"	"HCD"	"MS2"	"5.018209"	"73.5"	"100.000"	"62.4232"	"20362"	"20362"	"20345"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"62.3"	""	"62.8"	"2.5"	"76.0"	""	"182.5"	""	"153.5"	"161.2"	""	"800"	"40"	"36.000"	"29.000"	"0.0041885141922036"	"27"	"0"	"0.0004312"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLR"	"[R].mSVEADINGLR.[R]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"725.38214"	"1449.75701"	"1449.75689"	"0.08"	"0.00006"	"10/94"	"10"	"94"	"2007329.58599854"	"HCD"	"MS2"	"16.01122"	"78.1"	"100.000"	"62.7157"	"20482"	"20482"	"20465"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.6"	""	"46.6"	""	"56.5"	""	"269.8"	""	"134.9"	"178.2"	""	"799"	"34"	"36.000"	"29.000"	"0.0167308029264608"	"23"	"0"	"0.000609"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLR"	"[R].mSVEADINGLR.[R]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"725.38281"	"1449.75835"	"1449.75689"	"1.00"	"0.00073"	"10/94"	"10"	"94"	"1890957.28759766"	"HCD"	"MS2"	"2.34236"	"82.5"	"100.000"	"62.6323"	"20431"	"20431"	"20411"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.1"	""	"63.6"	""	"78.0"	""	"239.2"	""	"161.7"	"181.1"	""	"797"	"40"	"36.000"	"29.000"	"0.00390326759185366"	"29"	"0"	"0.001754"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQESGNGFVR"	"[R].lLQESGnGFVR.[H]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"725.39825"	"1449.78923"	"1449.78991"	"-0.47"	"-0.00034"	"9/98"	"9"	"98"	"281854.175231934"	"HCD"	"MS2"	"0"	"16.4"	"100.000"	"77.3883"	"26437"	"26437"	"26412"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.6"	""	"21.7"	""	"18.4"	""	"29.1"	""	"29.9"	"33.7"	""	"991"	"56"	"36.000"	"29.000"	"0.000111184349323436"	"19"	"0"	"4.055E-05"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQESGNGFVR"	"[R].lLQESGnGFVR.[H]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6346"	"0.0000"	"1"	"1"	"1"	"725.39850"	"1449.78972"	"1449.78991"	"-0.13"	"-0.00009"	"17/98"	"17"	"98"	"313133.219421387"	"HCD"	"MS2"	"10.61989"	"15.7"	"100.000"	"77.4890"	"26467"	"26467"	"26445"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.6"	""	"18.5"	""	"25.1"	""	"22.7"	""	"28.3"	"32.5"	""	"1014"	"52"	"37.000"	"30.000"	"0.000295806667866788"	"19"	"0"	"7.317E-06"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DATNDQVTK"	"[R].dATNDQVTk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.8393"	"0.0000"	"1"	"1"	"1"	"725.40002"	"1449.79277"	"1449.79494"	"-1.50"	"-0.00109"	"8/88"	"8"	"88"	"1567427.60400391"	"HCD"	"MS2"	"0"	"129.7"	"100.000"	"31.9578"	"8001"	"8001"	"7977"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"267.5"	""	"141.3"	""	"146.7"	""	"213.2"	"1.4"	"235.4"	"221.3"	""	"1021"	"56"	"37.000"	"30.000"	"0.000119123034079445"	"25"	"0"	"0.0002652"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DATNDQVTK"	"[R].dATNDQVTk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"725.40039"	"1449.79350"	"1449.79494"	"-0.99"	"-0.00072"	"13/88"	"13"	"88"	"1381924.35107422"	"HCD"	"MS2"	"0"	"117.0"	"100.000"	"31.9205"	"7994"	"7994"	"7976"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"261.9"	""	"114.0"	""	"119.0"	""	"185.7"	"0.4"	"223.1"	"203.0"	""	"1022"	"47"	"37.000"	"30.000"	"0.000934159210448941"	"26"	"0"	"0.0005276"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DATNDQVTK"	"[R].dATNDQVTk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"725.40112"	"1449.79497"	"1449.79494"	"0.02"	"0.00001"	"8/88"	"8"	"88"	"422754.477905273"	"HCD"	"MS2"	"10.84793"	"34.6"	"100.000"	"32.2562"	"8123"	"8123"	"8100"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.7"	""	"33.2"	""	"37.1"	""	"68.3"	"0.6"	"67.8"	"67.9"	""	"1018"	"33"	"37.000"	"30.000"	"0.0277790751295457"	"23"	"0"	"0.001299"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTWEALEK"	"[R].dTWEALEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.4615"	"0.0000"	"1"	"1"	"1"	"483.93692"	"1449.79621"	"1449.79897"	"-1.90"	"-0.00092"	"8/68"	"8"	"68"	"1026254.35296631"	"HCD"	"MS2"	"19.6822"	"42.4"	"100.000"	"78.7249"	"26971"	"26971"	"26949"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.6"	""	"49.4"	""	"50.4"	""	"82.5"	""	"81.6"	"77.1"	""	"1019"	"26"	"37.000"	"30.000"	"0.14032795243508"	"28"	"0.0023"	"0.02314"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDNDTNATK"	"[R].lDNDTNATk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q2HWF0"	"Formin-binding protein 1-like OS=Rattus norvegicus OX=10116 GN=Fnbp1l PE=1 SV=2"	"Q2HWF0"	"Formin-binding protein 1-like OS=Rattus norvegicus OX=10116 GN=Fnbp1l PE=1 SV=2"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"725.40186"	"1449.79643"	"1449.79494"	"1.03"	"0.00075"	"7/88"	"7"	"88"	"372861.865112305"	"HCD"	"MS2"	"0"	"32.7"	"100.000"	"38.1601"	"10520"	"10520"	"10490"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.3"	""	"44.1"	""	"38.6"	""	"52.4"	""	"56.4"	"58.5"	""	"1018"	"29"	"37.000"	"30.000"	"0.0636381846380819"	"19"	"0.006958"	"0.08061"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DATNDQVTK"	"[R].dATNDQVTk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"725.40192"	"1449.79656"	"1449.79494"	"1.11"	"0.00081"	"13/88"	"13"	"88"	"348023.461242676"	"HCD"	"MS2"	"0"	"32.9"	"100.000"	"32.2165"	"8114"	"8114"	"8092"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.6"	""	"30.6"	""	"42.5"	""	"54.7"	""	"64.1"	"61.6"	""	"1023"	"24"	"37.000"	"30.000"	"0.193573382082793"	"18"	"0.0001301"	"0.004454"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTWEALEK"	"[R].dTWEALEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.3182"	"0.0000"	"1"	"1"	"1"	"483.93716"	"1449.79694"	"1449.79897"	"-1.40"	"-0.00068"	"8/68"	"8"	"68"	"756352.879272461"	"HCD"	"MS2"	"24.76345"	"31.8"	"100.000"	"78.7088"	"26960"	"26960"	"26934"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.7"	""	"34.5"	""	"36.5"	""	"63.9"	"0.1"	"63.8"	"57.3"	""	"1023"	"22"	"37.000"	"30.000"	"0.3310134479554"	"29"	"0.006739"	"0.07611"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDNDTNATK"	"[R].lDNDTNATk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q2HWF0"	"Formin-binding protein 1-like OS=Rattus norvegicus OX=10116 GN=Fnbp1l PE=1 SV=2"	"Q2HWF0"	"Formin-binding protein 1-like OS=Rattus norvegicus OX=10116 GN=Fnbp1l PE=1 SV=2"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"725.40216"	"1449.79704"	"1449.79494"	"1.45"	"0.00105"	"14/88"	"14"	"88"	"446927.952148438"	"HCD"	"MS2"	"0"	"44.5"	"100.000"	"38.4276"	"10621"	"10621"	"10590"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.4"	""	"56.9"	""	"59.6"	""	"74.3"	"0.7"	"78.7"	"75.9"	""	"1023"	"50"	"37.000"	"30.000"	"0.000528257459046955"	""	"0"	"0.002434"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTWEALEK"	"[R].dTWEALEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.5610"	"0.0000"	"1"	"1"	"1"	"725.40265"	"1449.79802"	"1449.79897"	"-0.65"	"-0.00047"	"7/68"	"7"	"68"	"2076192.74353027"	"HCD"	"MS2"	"0"	"172.9"	"100.000"	"78.9464"	"27059"	"27059"	"27050"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"257.6"	""	"172.9"	""	"228.2"	""	"292.9"	""	"327.2"	"362.2"	""	"1037"	"41"	"37.000"	"30.000"	"0.00429288011884845"	""	"0.0002479"	"0.00592"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTWEALEK"	"[R].dTWEALEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"725.40283"	"1449.79839"	"1449.79897"	"-0.40"	"-0.00029"	"7/68"	"7"	"68"	"1267834.70031738"	"HCD"	"MS2"	"3.885942"	"104.6"	"100.000"	"78.6534"	"26942"	"26942"	"26929"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"156.6"	""	"120.1"	""	"127.8"	""	"186.3"	""	"203.4"	"198.1"	""	"1038"	"39"	"37.000"	"30.000"	"0.00713127785031495"	""	"0.0001301"	"0.004762"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGEPLGHVPAR"	"[R].sTGEPLGHVPAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"483.93777"	"1449.79877"	"1449.80114"	"-1.64"	"-0.00079"	"9/94"	"9"	"94"	"8859821.4543457"	"HCD"	"MS2"	"4.604802"	"161.6"	"100.000"	"31.4246"	"7792"	"7792"	"7772"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"199.8"	""	"185.0"	""	"214.4"	""	"313.6"	""	"317.7"	"305.1"	""	"1016"	"33"	"37.000"	"30.000"	"0.0242584871018107"	"15"	"0"	"5.229E-05"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTWEALEK"	"[R].dTWEALEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"725.40302"	"1449.79875"	"1449.79897"	"-0.15"	"-0.00011"	"7/68"	"7"	"68"	"1304496.60754395"	"HCD"	"MS2"	"4.147931"	"117.3"	"100.000"	"78.6838"	"26950"	"26950"	"26934"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"193.1"	""	"133.9"	""	"134.0"	""	"208.7"	""	"223.1"	"219.8"	""	"1016"	"40"	"37.000"	"30.000"	"0.00461172829330518"	""	"0"	"0.00363"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGEPLGHVPAR"	"[R].sTGEPLGHVPAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"725.40314"	"1449.79900"	"1449.80114"	"-1.48"	"-0.00107"	"5/94"	"5"	"94"	"166880.118774414"	"HCD"	"MS2"	"0"	"10.1"	"100.000"	"31.5903"	"7851"	"7851"	"7821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.0"	""	"16.8"	""	"10.0"	""	"21.1"	""	"21.0"	"17.2"	""	"1015"	"9"	"37.000"	"30.000"	"6.9252594181888"	"13"	"0.008668"	"0.109"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTWEALEK"	"[R].dTWEALEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"725.40332"	"1449.79936"	"1449.79897"	"0.27"	"0.00020"	"7/68"	"7"	"68"	"1782411.22668457"	"HCD"	"MS2"	"0"	"146.3"	"100.000"	"78.9790"	"27069"	"27069"	"27052"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"237.8"	""	"154.8"	""	"186.1"	""	"242.7"	""	"267.1"	"298.4"	""	"1015"	"40"	"37.000"	"30.000"	"0.00471450441290818"	""	"0.0001301"	"0.004431"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGEPLGHVPAR"	"[R].sTGEPLGHVPAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"483.93805"	"1449.79959"	"1449.80114"	"-1.07"	"-0.00052"	"13/94"	"13"	"94"	"8860464.92895508"	"HCD"	"MS2"	"5.515171"	"160.2"	"100.000"	"31.4525"	"7794"	"7794"	"7773"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"194.6"	""	"192.4"	""	"212.0"	""	"287.2"	"0.1"	"342.0"	"292.2"	""	"1016"	"38"	"37.000"	"30.000"	"0.00897147212908572"	"15"	"0"	"5.769E-05"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNQTPGQVALR"	"[K].hNQTPGQVALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"725.40875"	"1449.81023"	"1449.81238"	"-1.48"	"-0.00107"	"9/98"	"9"	"98"	"626992.154907227"	"HCD"	"MS2"	"0"	"28.9"	"100.000"	"24.7453"	"5072"	"5072"	"5053"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.1"	""	"40.9"	""	"42.5"	""	"44.1"	""	"48.5"	"52.2"	""	"1045"	"41"	"37.000"	"30.000"	"0.00394535688955189"	"20"	"0.0003538"	"0.006305"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNQTPGQVALR"	"[K].hNQTPGQVALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.8852"	"0.0000"	"1"	"1"	"1"	"483.94186"	"1449.81104"	"1449.81238"	"-0.92"	"-0.00045"	"8/98"	"8"	"98"	"16378523.4493408"	"HCD"	"MS2"	"18.85405"	"164.5"	"100.000"	"24.6576"	"5052"	"5052"	"5036"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"218.6"	""	"215.6"	""	"228.1"	""	"285.2"	"4.2"	"300.7"	"306.9"	""	"1017"	"61"	"37.000"	"30.000"	"4.38824591539504E-05"	"23"	"0"	"1.845E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNQTPGQVALR"	"[K].hNQTPGQVALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"483.94189"	"1449.81113"	"1449.81238"	"-0.86"	"-0.00042"	"8/98"	"8"	"98"	"10711886.387146"	"HCD"	"MS2"	"17.48182"	"114.7"	"83.975"	"24.9282"	"5160"	"5160"	"5153"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"173.3"	""	"143.6"	""	"156.2"	""	"187.2"	"2.4"	"211.7"	"211.7"	""	"1019"	"32"	"37.000"	"30.000"	"0.0343672030112092"	"14"	"0"	"0.0004486"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNQTPGQVALR"	"[K].hNQTPGQVALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"725.40924"	"1449.81120"	"1449.81238"	"-0.81"	"-0.00059"	"9/98"	"9"	"98"	"1231292.71417236"	"HCD"	"MS2"	"0"	"60.8"	"100.000"	"24.7242"	"5079"	"5079"	"5055"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"88.4"	""	"86.9"	""	"103.8"	""	"92.1"	""	"102.2"	"105.0"	""	"1019"	"26"	"37.000"	"30.000"	"0.114325784016732"	"14"	"0"	"0.002478"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNQTPGQVALR"	"[K].hNQTPGQVALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"483.94199"	"1449.81140"	"1449.81238"	"-0.67"	"-0.00032"	"9/98"	"9"	"98"	"21191083.3240967"	"HCD"	"MS2"	"9.905561"	"180.1"	"100.000"	"24.7590"	"5077"	"5077"	"5064"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"254.2"	""	"243.2"	""	"261.0"	""	"282.2"	""	"333.9"	"332.5"	""	"1019"	"66"	"37.000"	"30.000"	"1.22220537224043E-05"	"25"	"0"	"1.022E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAAQSSPAFGDR"	"[R].dAAQSSPAFGDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"725.85950"	"1450.71172"	"1450.71239"	"-0.46"	"-0.00033"	"11/124"	"11"	"124"	"775245.74822998"	"HCD"	"MS2"	"0"	"41.5"	"100.000"	"35.9904"	"9642"	"9642"	"9625"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.1"	""	"44.2"	""	"47.1"	""	"78.8"	"0.7"	"81.0"	"89.8"	""	"529"	"57"	"34.000"	"27.000"	"5.55169599218422E-05"	"25"	"0"	"1.41E-05"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAAQSSPAFGDR"	"[R].dAAQSSPAFGDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"0"	"2"	"2"	"0.8525"	"0.0000"	"1"	"1"	"1"	"725.85968"	"1450.71208"	"1450.71239"	"-0.21"	"-0.00015"	"11/124"	"11"	"124"	"1221589.31469727"	"HCD"	"MS2"	"0"	"64.8"	"100.000"	"35.8566"	"9583"	"9583"	"9564"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.0"	""	"63.0"	""	"77.4"	""	"113.5"	""	"139.7"	"135.1"	""	"560"	"61"	"34.000"	"27.000"	"2.48403683370629E-05"	"26"	"0"	"1.236E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAAQSSPAFGDR"	"[R].dAAQSSPAFGDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"0"	"2"	"2"	"0.7966"	"0.0000"	"1"	"1"	"1"	"725.85974"	"1450.71221"	"1450.71239"	"-0.12"	"-0.00009"	"10/124"	"10"	"124"	"617300.96673584"	"HCD"	"MS2"	"0"	"34.2"	"100.000"	"36.1548"	"9703"	"9703"	"9690"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.0"	""	"36.5"	""	"42.4"	""	"57.6"	""	"73.9"	"71.1"	""	"560"	"59"	"34.000"	"27.000"	"3.70815629854505E-05"	""	"0"	"4.993E-05"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAAQSSPAFGDR"	"[R].dAAQSSPAFGDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"725.85980"	"1450.71233"	"1450.71239"	"-0.04"	"-0.00003"	"9/124"	"9"	"124"	"864957.954284668"	"HCD"	"MS2"	"56.93015"	"59.2"	"100.000"	"35.6875"	"9519"	"9519"	"9496"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"94.5"	""	"70.9"	""	"78.9"	""	"97.3"	"0.1"	"109.7"	"109.0"	""	"560"	"24"	"34.000"	"27.000"	"0.110448044581078"	"18"	"0"	"0.001241"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLR"	"[R].mSVEADInGLR.[R]"	"N-Term(TMT6plex); M1(Oxidation); N8(Deamidated)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"725.87408"	"1450.74089"	"1450.74091"	"-0.01"	"-0.00001"	"14/94"	"14"	"94"	"316885.166625977"	"HCD"	"MS2"	"56.177"	"27.0"	"100.000"	"55.8194"	"17695"	"17695"	"17666"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.5"	""	"23.7"	""	"31.8"	""	"65.2"	"0.2"	"49.0"	"55.4"	""	"728"	"24"	"35.000"	"28.000"	"0.139991408664509"	""	"0.00912"	"0.1176"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EENGTWEK"	"[K].eENGTWEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"725.88208"	"1450.75688"	"1450.75783"	"-0.65"	"-0.00047"	"12/78"	"12"	"78"	"751483.265014648"	"HCD"	"MS2"	"0"	"80.0"	"100.000"	"45.2546"	"13393"	"13393"	"13371"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"128.0"	""	"91.7"	""	"102.9"	""	"128.1"	""	"156.9"	"156.0"	""	"876"	"32"	"36.000"	"29.000"	"0.0309367088767177"	"28"	"0.0001301"	"0.004695"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EENGTWEK"	"[K].eENGTWEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"725.88269"	"1450.75810"	"1450.75783"	"0.19"	"0.00014"	"5/78"	"5"	"78"	"464999.700500488"	"HCD"	"MS2"	"0"	"49.2"	"100.000"	"45.2198"	"13390"	"13390"	"13367"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.7"	""	"49.5"	""	"66.5"	""	"78.9"	"1.9"	"91.6"	"87.4"	""	"878"	"26"	"36.000"	"29.000"	"0.110780805911897"	"23"	"0.002056"	"0.02224"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAADAEMEK"	"[K].qAADAEMEk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"725.88324"	"1450.75920"	"1450.76120"	"-1.38"	"-0.00100"	"9/88"	"9"	"88"	"533200.938293457"	"HCD"	"MS2"	"0"	"48.4"	"100.000"	"38.9476"	"10832"	"10832"	"10805"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"71.9"	""	"54.0"	""	"53.9"	""	"83.0"	""	"92.6"	"105.5"	""	"864"	"5"	"36.000"	"29.000"	"12.6614588194814"	"13"	"0.009417"	"0.1236"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEPSVAEYTVR"	"[K].aEPSVAEYTVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R0T3"	"DnaJ homolog subfamily C member 3 OS=Rattus norvegicus OX=10116 GN=Dnajc3 PE=1 SV=3"	"Q9R0T3"	"DnaJ homolog subfamily C member 3 OS=Rattus norvegicus OX=10116 GN=Dnajc3 PE=1 SV=3"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"725.88989"	"1450.77251"	"1450.77392"	"-0.98"	"-0.00071"	"8/94"	"8"	"94"	"871456.846191406"	"HCD"	"MS2"	"0"	"39.8"	"100.000"	"54.5694"	"17199"	"17199"	"17177"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.9"	""	"49.4"	""	"48.8"	""	"63.8"	"0.6"	"76.9"	"81.7"	""	"947"	"37"	"36.000"	"29.000"	"0.00949117504957404"	"20"	"0"	"0.002417"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEPSVAEYTVR"	"[K].aEPSVAEYTVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R0T3"	"DnaJ homolog subfamily C member 3 OS=Rattus norvegicus OX=10116 GN=Dnajc3 PE=1 SV=3"	"Q9R0T3"	"DnaJ homolog subfamily C member 3 OS=Rattus norvegicus OX=10116 GN=Dnajc3 PE=1 SV=3"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"725.89026"	"1450.77324"	"1450.77392"	"-0.47"	"-0.00034"	"8/94"	"8"	"94"	"899752.542236328"	"HCD"	"MS2"	"0"	"44.4"	"100.000"	"54.8195"	"17288"	"17288"	"17264"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.1"	""	"56.5"	""	"54.7"	""	"66.3"	""	"89.4"	"86.1"	""	"938"	"41"	"36.000"	"29.000"	"0.00399183739916914"	"20"	"0"	"0.0003659"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEPSVAEYTVR"	"[K].aEPSVAEYTVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R0T3"	"DnaJ homolog subfamily C member 3 OS=Rattus norvegicus OX=10116 GN=Dnajc3 PE=1 SV=3"	"Q9R0T3"	"DnaJ homolog subfamily C member 3 OS=Rattus norvegicus OX=10116 GN=Dnajc3 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"725.89197"	"1450.77666"	"1450.77392"	"1.88"	"0.00137"	"7/94"	"7"	"94"	"692893.609680176"	"HCD"	"MS2"	"0"	"32.7"	"100.000"	"55.0122"	"17365"	"17365"	"17346"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.0"	""	"40.5"	""	"44.2"	""	"53.7"	"0.5"	"59.5"	"59.1"	""	"967"	"20"	"36.000"	"29.000"	"0.531369323365624"	"14"	"0.003449"	"0.03316"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEPSVAEYTVR"	"[K].aEPSVAEYTVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R0T3"	"DnaJ homolog subfamily C member 3 OS=Rattus norvegicus OX=10116 GN=Dnajc3 PE=1 SV=3"	"Q9R0T3"	"DnaJ homolog subfamily C member 3 OS=Rattus norvegicus OX=10116 GN=Dnajc3 PE=1 SV=3"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"725.89264"	"1450.77800"	"1450.77392"	"2.81"	"0.00204"	"8/94"	"8"	"94"	"772951.112304688"	"HCD"	"MS2"	"0"	"32.7"	"100.000"	"54.7591"	"17276"	"17276"	"17255"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.8"	""	"38.8"	""	"41.3"	""	"50.1"	"1.5"	"65.2"	"63.4"	""	"946"	"25"	"36.000"	"29.000"	"0.145499379337235"	"15"	"0.0006732"	"0.008569"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQPEHVISQGR"	"[R].aQPEHVISQGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"484.26886"	"1450.79203"	"1450.79639"	"-3.01"	"-0.00146"	"9/106"	"9"	"106"	"10181476.3157349"	"HCD"	"MS2"	"33.26093"	"113.2"	"87.744"	"24.9902"	"5185"	"5185"	"5170"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"171.1"	""	"126.9"	""	"153.4"	""	"185.0"	"2.1"	"219.4"	"215.3"	""	"974"	"31"	"36.000"	"29.000"	"0.0394938035174821"	"15"	"0"	"0.0001547"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIDNPDYK"	"[R].qIDNPDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"725.89978"	"1450.79228"	"1450.79422"	"-1.33"	"-0.00097"	"12/76"	"12"	"76"	"8236390.10058594"	"HCD"	"MS2"	"0"	"606.1"	"100.000"	"46.7210"	"14000"	"14000"	"13983"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"988.6"	""	"594.5"	""	"724.5"	""	"1011.2"	""	"1184.5"	"1248.9"	""	"974"	"39"	"36.000"	"29.000"	"0.0065392653607414"	"22"	"0.0004639"	"0.007688"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQPEHVISQGR"	"[R].aQPEHVISQGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"484.26898"	"1450.79239"	"1450.79639"	"-2.76"	"-0.00133"	"7/106"	"7"	"106"	"9333277.71630859"	"HCD"	"MS2"	"28.01873"	"113.5"	"100.000"	"25.0848"	"5208"	"5208"	"5196"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"173.3"	""	"132.5"	""	"152.2"	""	"174.9"	"2.9"	"222.9"	"217.2"	""	"965"	"42"	"36.000"	"29.000"	"0.00310811670611073"	"16"	"0"	"5.944E-05"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIDNPDYK"	"[R].qIDNPDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"725.90051"	"1450.79375"	"1450.79422"	"-0.32"	"-0.00023"	"5/76"	"5"	"76"	"3175141.14654541"	"HCD"	"MS2"	"66.70731"	"282.2"	"100.000"	"46.4208"	"13880"	"13880"	"13862"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"445.8"	""	"335.7"	""	"354.4"	""	"454.2"	""	"548.5"	"539.3"	""	"1001"	"14"	"36.000"	"30.000"	"1.79227266769869"	"14"	"0.001465"	"0.01822"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIDNPDYK"	"[R].qIDNPDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"725.90076"	"1450.79424"	"1450.79422"	"0.02"	"0.00001"	"10/76"	"10"	"76"	"2721091.79638672"	"HCD"	"MS2"	"60.72326"	"243.0"	"100.000"	"46.6319"	"13954"	"13954"	"13942"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"378.7"	""	"308.5"	""	"290.8"	""	"409.8"	""	"470.6"	"450.8"	""	"977"	"11"	"36.000"	"29.000"	"3.66323321258905"	"14"	"0.002711"	"0.02623"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQPEHVISQGR"	"[R].aQPEHVISQGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"725.90082"	"1450.79436"	"1450.79639"	"-1.40"	"-0.00102"	"6/106"	"6"	"106"	"307836.86315918"	"HCD"	"MS2"	"0"	"14.5"	"100.000"	"25.0133"	"5194"	"5194"	"5180"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.0"	""	"15.9"	""	"16.1"	""	"24.7"	""	"30.8"	"27.0"	""	"977"	"32"	"36.000"	"29.000"	"0.0345831515671651"	"20"	"0.0008629"	"0.01021"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIDNPDYK"	"[R].qIDNPDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"725.90088"	"1450.79448"	"1450.79422"	"0.18"	"0.00013"	"12/76"	"12"	"76"	"9458242.37835693"	"HCD"	"MS2"	"0"	"682.4"	"100.000"	"46.9140"	"14068"	"14068"	"14057"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1112.4"	""	"705.3"	""	"817.7"	""	"1142.3"	""	"1339.6"	"1355.0"	""	"977"	"37"	"36.000"	"29.000"	"0.00937269679817436"	"21"	"0.0003538"	"0.006176"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIDNPDYK"	"[R].qIDNPDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"725.90143"	"1450.79558"	"1450.79422"	"0.94"	"0.00068"	"12/76"	"12"	"76"	"740083.538818359"	"HCD"	"MS2"	"0"	"65.0"	"100.000"	"47.2335"	"14198"	"14198"	"14177"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"99.3"	""	"65.1"	""	"76.0"	""	"109.3"	""	"136.9"	"134.9"	""	"966"	"30"	"36.000"	"29.000"	"0.0536966424277008"	"21"	"0.003967"	"0.04205"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHDPQLLTER"	"[R].iHDPQLLTER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"484.27826"	"1450.82022"	"1450.82154"	"-0.91"	"-0.00044"	"11/94"	"11"	"94"	"2784370.72558594"	"HCD"	"MS2"	"12.89431"	"42.4"	"100.000"	"49.3669"	"15080"	"15080"	"15063"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.0"	""	"50.1"	""	"57.5"	""	"74.9"	""	"82.9"	"82.8"	""	"904"	"35"	"36.000"	"29.000"	"0.0148983589904211"	"25"	"0"	"0.0003732"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHDPQLLTER"	"[R].iHDPQLLTER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"484.27841"	"1450.82068"	"1450.82154"	"-0.59"	"-0.00029"	"7/94"	"7"	"94"	"3961084.73376465"	"HCD"	"MS2"	"8.008817"	"55.4"	"100.000"	"49.0857"	"14965"	"14965"	"14944"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.8"	""	"63.3"	""	"72.5"	""	"93.8"	"0.1"	"108.7"	"107.3"	""	"900"	"34"	"36.000"	"29.000"	"0.0186299853668879"	"19"	"0"	"0.0003633"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHDPQLLTER"	"[R].iHDPQLLTER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"484.27859"	"1450.82123"	"1450.82154"	"-0.21"	"-0.00010"	"7/94"	"7"	"94"	"3669642.45922852"	"HCD"	"MS2"	"10.07871"	"52.3"	"100.000"	"49.7382"	"15219"	"15219"	"15201"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.6"	""	"69.0"	""	"67.9"	""	"86.3"	""	"100.2"	"107.8"	""	"904"	"39"	"36.000"	"29.000"	"0.00599982294893842"	"21"	"0"	"0.0003717"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHDPQLLTER"	"[R].iHDPQLLTER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"484.27902"	"1450.82251"	"1450.82154"	"0.67"	"0.00032"	"7/94"	"7"	"94"	"2715728.40618896"	"HCD"	"MS2"	"17.05089"	"46.0"	"100.000"	"49.4504"	"15102"	"15102"	"15073"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.2"	""	"50.4"	""	"67.6"	""	"80.3"	""	"91.6"	"81.3"	""	"894"	"42"	"36.000"	"29.000"	"0.00251946032154202"	"21"	"0"	"0.0002312"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDEDVLTTLK"	"[-].mDEDVLTTLk.[I]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q5EB77"	"Ras-related protein Rab-18 OS=Rattus norvegicus OX=10116 GN=Rab18 PE=2 SV=1"	"Q5EB77"	"Ras-related protein Rab-18 OS=Rattus norvegicus OX=10116 GN=Rab18 PE=2 SV=1"	"0"	"2"	"2"	"0.4848"	"0.0000"	"1"	"1"	"1"	"726.37848"	"1451.74968"	"1451.75008"	"-0.27"	"-0.00020"	"5/84"	"5"	"84"	"357181.036499023"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"99.3750"	"34783"	"34783"	"34779"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.1"	""	"15.3"	""	"17.8"	""	"43.7"	""	"26.9"	"28.1"	""	"864"	"33"	"36.000"	"29.000"	"0.0233605867512491"	""	"0.0002479"	"0.005577"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDEDVLTTLK"	"[-].mDEDVLTTLk.[I]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q5EB77"	"Ras-related protein Rab-18 OS=Rattus norvegicus OX=10116 GN=Rab18 PE=2 SV=1"	"Q5EB77"	"Ras-related protein Rab-18 OS=Rattus norvegicus OX=10116 GN=Rab18 PE=2 SV=1"	"0"	"2"	"2"	"0.3462"	"0.0000"	"1"	"1"	"1"	"726.37848"	"1451.74968"	"1451.75008"	"-0.27"	"-0.00020"	"10/84"	"10"	"84"	"409317.005187988"	"HCD"	"MS2"	"0"	"16.3"	"100.000"	"99.3648"	"34814"	"34814"	"34811"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.6"	""	"16.3"	""	"16.0"	""	"48.8"	""	"30.0"	"30.3"	""	"864"	"26"	"36.000"	"29.000"	"0.114152058316308"	""	"0.0004639"	"0.007694"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPYSEPSK"	"[K].eGPYSEPSk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"3"	"3"	"0.5862"	"0.0000"	"1"	"1"	"1"	"484.59698"	"1451.77640"	"1451.77823"	"-1.26"	"-0.00061"	"9/78"	"9"	"78"	"1838414.94110107"	"HCD"	"MS2"	"13.29574"	"81.1"	"100.000"	"41.0187"	"11675"	"11675"	"11658"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.8"	""	"74.0"	""	"83.7"	""	"148.5"	"2.7"	"189.2"	"193.9"	""	"925"	"29"	"36.000"	"29.000"	"0.0538408288602352"	"27"	"0"	"0.003067"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPYSEPSK"	"[K].eGPYSEPSk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"726.39282"	"1451.77837"	"1451.77823"	"0.09"	"0.00007"	"7/78"	"7"	"78"	"1933490.37261963"	"HCD"	"MS2"	"46.57496"	"129.2"	"100.000"	"40.8809"	"11619"	"11619"	"11598"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"156.1"	""	"144.7"	""	"148.8"	""	"221.3"	""	"273.1"	"284.7"	""	"949"	"36"	"36.000"	"29.000"	"0.0125382295534926"	"23"	"0"	"0.0005237"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPYSEPSK"	"[K].eGPYSEPSk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"726.39319"	"1451.77910"	"1451.77823"	"0.60"	"0.00043"	"7/78"	"7"	"78"	"2159195.48913574"	"HCD"	"MS2"	"47.6617"	"135.1"	"100.000"	"40.6989"	"11555"	"11555"	"11535"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"160.9"	""	"145.7"	""	"163.2"	""	"231.0"	"1.6"	"298.7"	"282.5"	""	"957"	"38"	"36.000"	"29.000"	"0.00751418601873606"	"20"	"0"	"0.0008432"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMVETELK"	"[R].qmVETELk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"726.41254"	"1451.81780"	"1451.81799"	"-0.13"	"-0.00010"	"5/74"	"5"	"74"	"1970682.41497803"	"HCD"	"MS2"	"30.7755"	"127.1"	"100.000"	"47.5517"	"14340"	"14340"	"14317"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"116.1"	""	"95.2"	""	"141.4"	""	"359.2"	"0.5"	"240.6"	"253.4"	""	"852"	"24"	"36.000"	"29.000"	"0.171557456622646"	"17"	"0.003449"	"0.03257"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTESEVLK"	"[R].tSTESEVLk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.6600"	"0.0000"	"1"	"1"	"1"	"726.42145"	"1451.83562"	"1451.83575"	"-0.09"	"-0.00006"	"8/74"	"8"	"74"	"1452781.17358398"	"HCD"	"MS2"	"8.438953"	"123.0"	"100.000"	"46.3916"	"13856"	"13856"	"13836"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"188.9"	""	"156.4"	""	"158.4"	""	"183.0"	"0.5"	"258.4"	"221.2"	""	"786"	"50"	"35.000"	"28.000"	"0.000378784806284221"	""	"0"	"0.0004816"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTESEVLK"	"[R].tSTESEVLk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.6739"	"0.0000"	"1"	"1"	"1"	"726.42151"	"1451.83574"	"1451.83575"	"0.00"	"0.00000"	"14/74"	"14"	"74"	"1948013.43395996"	"HCD"	"MS2"	"5.992268"	"160.7"	"100.000"	"46.2396"	"13806"	"13806"	"13785"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"232.6"	""	"208.9"	""	"205.8"	""	"267.3"	""	"320.0"	"292.3"	""	"786"	"46"	"35.000"	"28.000"	"0.0010651053113331"	""	"0"	"0.0003996"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDDSSVLEATR"	"[R].mDDSSVLEATR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"726.86340"	"1452.71953"	"1452.72017"	"-0.44"	"-0.00032"	"7/96"	"7"	"96"	"208685.000366211"	"HCD"	"MS2"	"0"	"19.3"	"100.000"	"61.0040"	"19789"	"19789"	"19769"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.5"	""	"20.2"	""	"16.6"	""	"31.3"	""	"43.0"	"50.2"	""	"636"	"38"	"35.000"	"28.000"	"0.00535090351420409"	"24"	"0.0006732"	"0.008857"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDDSSVLEATR"	"[R].mDDSSVLEATR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"726.86456"	"1452.72185"	"1452.72017"	"1.15"	"0.00084"	"11/96"	"11"	"96"	"235376.518859863"	"HCD"	"MS2"	"0"	"18.8"	"100.000"	"61.1207"	"19821"	"19821"	"19798"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.3"	""	"14.5"	""	"18.9"	""	"23.5"	""	"41.9"	"55.7"	""	"639"	"31"	"35.000"	"28.000"	"0.0266361138485973"	"20"	"0.000936"	"0.01331"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLESLGEEQR"	"[R].yLESLGEEQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"726.87897"	"1452.75066"	"1452.75319"	"-1.74"	"-0.00127"	"8/84"	"8"	"84"	"274718.640563965"	"HCD"	"MS2"	"0"	"20.8"	"100.000"	"61.8318"	"20112"	"20112"	"20081"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.2"	""	"26.9"	""	"28.4"	""	"34.0"	""	"38.6"	"35.2"	""	"873"	"24"	"36.000"	"29.000"	"0.174575883270719"	"25"	"0"	"0.003505"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEASVETGDR"	"[K].lFEASVETGDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"726.87982"	"1452.75237"	"1452.75319"	"-0.57"	"-0.00041"	"16/94"	"16"	"94"	"487247.679992676"	"HCD"	"MS2"	"0"	"32.8"	"100.000"	"69.1457"	"23080"	"23080"	"23059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.4"	""	"41.5"	""	"35.8"	""	"54.7"	"0.0"	"68.2"	"70.9"	""	"862"	"29"	"36.000"	"29.000"	"0.0556515506927433"	"19"	"0"	"0.001201"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEASVETGDR"	"[K].lFEASVETGDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.4324"	"0.0000"	"1"	"1"	"1"	"726.88007"	"1452.75286"	"1452.75319"	"-0.23"	"-0.00017"	"7/94"	"7"	"94"	"1045336.68804932"	"HCD"	"MS2"	"45.76706"	"72.6"	"100.000"	"68.8348"	"22953"	"22953"	"22933"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"95.5"	""	"86.3"	""	"108.3"	""	"109.6"	""	"127.8"	"161.3"	""	"871"	"37"	"36.000"	"29.000"	"0.00778015338848068"	""	"0"	"7.106E-05"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEASVETGDR"	"[K].lFEASVETGDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"726.88007"	"1452.75286"	"1452.75319"	"-0.23"	"-0.00017"	"7/94"	"7"	"94"	"1078327.534729"	"HCD"	"MS2"	"32.35647"	"69.7"	"100.000"	"68.7016"	"22913"	"22913"	"22895"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"98.3"	""	"90.6"	""	"99.5"	""	"104.5"	""	"132.0"	"138.6"	""	"871"	"38"	"36.000"	"29.000"	"0.00736187025730642"	""	"0"	"0.000195"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEDNEYTAR"	"[R].iIEDNEYTAR.[EQ]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"P50545"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"726.88025"	"1452.75322"	"1452.75319"	"0.02"	"0.00002"	"8/92"	"8"	"92"	"2284736.74841309"	"HCD"	"MS2"	"12.51124"	"123.0"	"100.000"	"56.4393"	"17961"	"17961"	"17942"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"177.6"	""	"151.6"	""	"159.7"	""	"194.7"	""	"235.4"	"249.6"	""	"866"	"45"	"36.000"	"29.000"	"0.00144041586576304"	"20"	"0"	"6.639E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIEDNEYTAR"	"[R].lIEDNEYTAR.[EQ]"	"N-Term(TMT6plex)"	"1"	"4"	"F1LM93"	"Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"Q01621; Q62844; Q9WUD9; F1LM93"	"Proto-oncogene tyrosine-protein kinase LCK OS=Rattus norvegicus OX=10116 GN=Lck PE=1 SV=3; Tyrosine-protein kinase Fyn OS=Rattus norvegicus OX=10116 GN=Fyn PE=1 SV=1; Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4; Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"726.88025"	"1452.75322"	"1452.75319"	"0.02"	"0.00002"	"8/92"	"8"	"92"	"2284736.74841309"	"HCD"	"MS2"	"12.51124"	"123.0"	"100.000"	"56.4393"	"17961"	"17961"	"17942"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"177.6"	""	"151.6"	""	"159.7"	""	"194.7"	""	"235.4"	"249.6"	""	"866"	"45"	"36.000"	"29.000"	"0.00144041586576304"	"20"	"0"	"6.639E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEDNEYTAR"	"[R].iIEDNEYTAR.[EQ]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"P50545"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"726.88043"	"1452.75359"	"1452.75319"	"0.27"	"0.00020"	"6/92"	"6"	"92"	"2292372.26586914"	"HCD"	"MS2"	"9.983601"	"132.3"	"100.000"	"56.6234"	"18022"	"18022"	"18004"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"182.8"	""	"165.6"	""	"170.2"	""	"202.0"	""	"274.3"	"263.1"	""	"863"	"39"	"36.000"	"29.000"	"0.00493152001461786"	"19"	"0"	"9.207E-05"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIEDNEYTAR"	"[R].lIEDNEYTAR.[EQ]"	"N-Term(TMT6plex)"	"1"	"4"	"F1LM93"	"Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"Q01621; Q62844; Q9WUD9; F1LM93"	"Proto-oncogene tyrosine-protein kinase LCK OS=Rattus norvegicus OX=10116 GN=Lck PE=1 SV=3; Tyrosine-protein kinase Fyn OS=Rattus norvegicus OX=10116 GN=Fyn PE=1 SV=1; Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4; Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"726.88043"	"1452.75359"	"1452.75319"	"0.27"	"0.00020"	"6/92"	"6"	"92"	"2292372.26586914"	"HCD"	"MS2"	"9.983601"	"132.3"	"100.000"	"56.6234"	"18022"	"18022"	"18004"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"182.8"	""	"165.6"	""	"170.2"	""	"202.0"	""	"274.3"	"263.1"	""	"863"	"39"	"36.000"	"29.000"	"0.00493152001461786"	"19"	"0"	"9.207E-05"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEDNEYTAR"	"[R].iIEDNEYTAR.[EQ]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"P50545"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"726.88055"	"1452.75383"	"1452.75319"	"0.44"	"0.00032"	"6/92"	"6"	"92"	"676703.782226563"	"HCD"	"MS2"	"4.580614"	"47.2"	"100.000"	"56.9343"	"18149"	"18149"	"18131"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.0"	""	"64.3"	""	"63.4"	""	"70.9"	""	"90.2"	"98.9"	""	"863"	"42"	"36.000"	"29.000"	"0.00282475509110029"	"17"	"0"	"0.0001638"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIEDNEYTAR"	"[R].lIEDNEYTAR.[EQ]"	"N-Term(TMT6plex)"	"1"	"4"	"F1LM93"	"Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"Q01621; Q62844; Q9WUD9; F1LM93"	"Proto-oncogene tyrosine-protein kinase LCK OS=Rattus norvegicus OX=10116 GN=Lck PE=1 SV=3; Tyrosine-protein kinase Fyn OS=Rattus norvegicus OX=10116 GN=Fyn PE=1 SV=1; Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4; Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"726.88055"	"1452.75383"	"1452.75319"	"0.44"	"0.00032"	"6/92"	"6"	"92"	"676703.782226563"	"HCD"	"MS2"	"4.580614"	"47.2"	"100.000"	"56.9343"	"18149"	"18149"	"18131"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.0"	""	"64.3"	""	"63.4"	""	"70.9"	""	"90.2"	"98.9"	""	"863"	"42"	"36.000"	"29.000"	"0.00282475509110029"	"17"	"0"	"0.0001638"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEDNEYTAR"	"[R].iIEDNEYTAR.[EQ]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"P50545"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"726.88055"	"1452.75383"	"1452.75319"	"0.44"	"0.00032"	"6/92"	"6"	"92"	"666676.641235352"	"HCD"	"MS2"	"0"	"44.1"	"100.000"	"56.7525"	"18089"	"18089"	"18070"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.0"	""	"65.6"	""	"58.7"	""	"63.3"	"2.1"	"87.3"	"84.0"	""	"863"	"42"	"36.000"	"29.000"	"0.00249448444455567"	"21"	"0"	"7.89E-05"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIEDNEYTAR"	"[R].lIEDNEYTAR.[EQ]"	"N-Term(TMT6plex)"	"1"	"4"	"F1LM93"	"Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"Q01621; Q62844; Q9WUD9; F1LM93"	"Proto-oncogene tyrosine-protein kinase LCK OS=Rattus norvegicus OX=10116 GN=Lck PE=1 SV=3; Tyrosine-protein kinase Fyn OS=Rattus norvegicus OX=10116 GN=Fyn PE=1 SV=1; Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4; Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"726.88055"	"1452.75383"	"1452.75319"	"0.44"	"0.00032"	"6/92"	"6"	"92"	"666676.641235352"	"HCD"	"MS2"	"0"	"44.1"	"100.000"	"56.7525"	"18089"	"18089"	"18070"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.0"	""	"65.6"	""	"58.7"	""	"63.3"	"2.1"	"87.3"	"84.0"	""	"863"	"42"	"36.000"	"29.000"	"0.00249448444455567"	"21"	"0"	"7.89E-05"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMAEDTVNK"	"[R].sMAEDTVNk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"726.89105"	"1452.77483"	"1452.77685"	"-1.39"	"-0.00101"	"8/76"	"8"	"76"	"554135.444763184"	"HCD"	"MS2"	"0"	"50.9"	"100.000"	"42.7626"	"12385"	"12385"	"12354"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"77.7"	""	"52.2"	""	"59.6"	""	"76.7"	"1.9"	"104.0"	"111.5"	""	"874"	"54"	"36.000"	"29.000"	"0.000170012728362501"	"21"	"0"	"0.0001898"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMAEDTVNK"	"[R].sMAEDTVNk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"726.89185"	"1452.77641"	"1452.77685"	"-0.30"	"-0.00022"	"8/76"	"8"	"76"	"449783.407470703"	"HCD"	"MS2"	"0"	"46.6"	"100.000"	"42.5969"	"12317"	"12317"	"12293"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.0"	""	"45.8"	""	"53.9"	""	"77.1"	""	"93.6"	"106.0"	""	"881"	"35"	"36.000"	"29.000"	"0.0136127513802224"	"20"	"0"	"0.0005877"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMAEDTVNK"	"[R].sMAEDTVNk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"726.89276"	"1452.77825"	"1452.77685"	"0.96"	"0.00070"	"7/76"	"7"	"76"	"372081.960571289"	"HCD"	"MS2"	"0"	"38.5"	"100.000"	"42.4402"	"12264"	"12264"	"12236"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.4"	""	"36.2"	""	"45.2"	""	"69.3"	"0.1"	"78.5"	"89.1"	""	"897"	"40"	"36.000"	"29.000"	"0.00411872169522886"	"15"	"0"	"0.000387"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEEAEK"	"[R].fLEEEAEk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"726.90204"	"1452.79680"	"1452.79863"	"-1.26"	"-0.00092"	"14/64"	"14"	"64"	"1641167.43994141"	"HCD"	"MS2"	"6.314522"	"144.0"	"100.000"	"68.5056"	"22833"	"22833"	"22815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"224.5"	""	"181.3"	""	"212.1"	""	"175.5"	""	"256.3"	"318.2"	""	"834"	"40"	"36.000"	"29.000"	"0.00429671012224154"	"24"	"0"	"0.003235"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEEAEK"	"[R].fLEEEAEk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"726.90240"	"1452.79753"	"1452.79863"	"-0.76"	"-0.00055"	"14/64"	"14"	"64"	"647853.795532227"	"HCD"	"MS2"	"28.85322"	"61.3"	"100.000"	"68.2105"	"22713"	"22713"	"22687"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.8"	""	"84.7"	""	"81.6"	""	"79.7"	""	"111.1"	"132.9"	""	"851"	"41"	"36.000"	"29.000"	"0.00318346122467496"	"26"	"0"	"0.002476"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEEAEK"	"[R].fLEEEAEk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"726.90265"	"1452.79802"	"1452.79863"	"-0.42"	"-0.00031"	"14/64"	"14"	"64"	"1814352.81756592"	"HCD"	"MS2"	"0"	"158.8"	"100.000"	"68.5901"	"22854"	"22854"	"22837"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"251.5"	""	"216.9"	""	"226.6"	""	"194.5"	""	"279.3"	"337.0"	""	"845"	"42"	"36.000"	"29.000"	"0.00278500970740725"	"25"	"0"	"0.00295"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEEAEK"	"[R].fLEEEAEk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"726.90326"	"1452.79924"	"1452.79863"	"0.42"	"0.00031"	"14/64"	"14"	"64"	"371573.420593262"	"HCD"	"MS2"	"0"	"35.7"	"100.000"	"68.3018"	"22736"	"22736"	"22710"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.2"	""	"46.1"	""	"51.8"	""	"47.9"	""	"65.1"	"76.5"	""	"843"	"43"	"36.000"	"29.000"	"0.00221206344495279"	"26"	"0"	"0.001789"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVLAHLEEER"	"[R].aGVLAHLEEER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLT0"	"Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"Q9JLT0"	"Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"0"	"3"	"3"	"0.8545"	"0.0000"	"1"	"1"	"1"	"484.93799"	"1452.79941"	"1452.80081"	"-0.96"	"-0.00047"	"8/84"	"8"	"84"	"4352785.7555542"	"HCD"	"MS2"	"23.1192"	"71.2"	"100.000"	"59.2053"	"19090"	"19090"	"19069"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"76.6"	""	"81.0"	""	"87.1"	""	"147.2"	""	"140.3"	"145.1"	""	"842"	"55"	"36.000"	"29.000"	"0.000133131889493089"	"24"	"0"	"4.213E-05"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVLAHLEEER"	"[R].aGVLAHLEEER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLT0"	"Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"Q9JLT0"	"Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"0"	"3"	"3"	"0.8684"	"0.0000"	"1"	"1"	"1"	"484.93817"	"1452.79996"	"1452.80081"	"-0.58"	"-0.00028"	"9/84"	"9"	"84"	"3970470.70947266"	"HCD"	"MS2"	"26.99521"	"65.2"	"100.000"	"59.4214"	"19163"	"19163"	"19142"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"74.2"	""	"73.5"	""	"81.4"	""	"131.3"	""	"129.6"	"134.1"	""	"838"	"76"	"36.000"	"29.000"	"9.53265823493496E-07"	"27"	"0"	"3.109E-06"	"1.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYELQESNVR"	"[R].sYELQESNVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"727.37634"	"1453.74541"	"1453.74844"	"-2.08"	"-0.00151"	"8/94"	"8"	"94"	"1058703.84533691"	"HCD"	"MS2"	"0"	"65.3"	"100.000"	"43.5809"	"12719"	"12719"	"12695"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"109.9"	""	"97.8"	""	"86.0"	""	"101.8"	"1.6"	"111.7"	"108.8"	""	"758"	"51"	"35.000"	"28.000"	"0.000314513440887966"	"21"	"0"	"3.142E-05"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYELQESNVR"	"[R].sYELQESNVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.37689"	"1453.74651"	"1453.74844"	"-1.33"	"-0.00097"	"8/94"	"8"	"94"	"511685.553283691"	"HCD"	"MS2"	"0"	"38.7"	"100.000"	"43.7450"	"12794"	"12794"	"12776"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.3"	""	"52.9"	""	"60.6"	""	"50.1"	"4.8"	"67.7"	"70.5"	""	"758"	"45"	"35.000"	"28.000"	"0.00118751528951561"	"15"	"0"	"0.0002978"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYELQESNVR"	"[R].sYELQESNVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"727.37799"	"1453.74870"	"1453.74844"	"0.18"	"0.00013"	"8/94"	"8"	"94"	"648397.422607422"	"HCD"	"MS2"	"0"	"45.6"	"100.000"	"43.4081"	"12659"	"12659"	"12637"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"72.8"	""	"64.9"	""	"63.9"	""	"72.5"	"3.3"	"79.4"	"74.5"	""	"773"	"54"	"35.000"	"28.000"	"0.000167166595695031"	"23"	"0"	"2.916E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSSDLTTASK"	"[R].DLSSSDLTTASk.[I]"	"K12(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.6757"	"0.0000"	"1"	"1"	"1"	"727.38251"	"1453.75774"	"1453.75833"	"-0.41"	"-0.00030"	"6/108"	"6"	"108"	"233144.121337891"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"52.7617"	"16464"	"16464"	"16434"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.6"	""	"25.4"	""	"29.3"	""	"39.9"	""	"28.1"	"33.8"	""	"792"	"37"	"35.000"	"28.000"	"0.00819775974121252"	"27"	"0.0006732"	"0.008922"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSSDLTTASK"	"[R].DLSSSDLTTASk.[I]"	"K12(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9385"	"0.0000"	"1"	"1"	"1"	"727.38336"	"1453.75945"	"1453.75833"	"0.77"	"0.00056"	"8/108"	"8"	"108"	"250139.549621582"	"HCD"	"MS2"	"0"	"19.5"	"100.000"	"53.0663"	"16577"	"16577"	"16547"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.9"	""	"26.4"	""	"23.7"	""	"28.0"	""	"41.5"	"38.6"	""	"793"	"65"	"35.000"	"28.000"	"1.22530213899164E-05"	"20"	"0"	"0.0005187"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAQEQYNK"	"[K].dAQEQYNk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"727.38708"	"1453.76689"	"1453.76873"	"-1.26"	"-0.00092"	"6/72"	"6"	"72"	"198328.535095215"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"31.3690"	"7770"	"7770"	"7740"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.2"	""	"18.1"	""	"20.3"	""	"31.3"	""	"39.9"	"28.3"	""	"805"	"12"	"36.000"	"29.000"	"2.2843670367694"	"14"	"0.008478"	"0.1034"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYEAEGIAK"	"[K].dYEAEGIAk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"727.39941"	"1453.79155"	"1453.79388"	"-1.60"	"-0.00116"	"13/72"	"13"	"72"	"277397.948852539"	"HCD"	"MS2"	"0"	"26.3"	"100.000"	"54.9384"	"17349"	"17349"	"17330"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.1"	""	"42.7"	""	"34.6"	""	"36.0"	""	"50.8"	"48.6"	""	"809"	"29"	"36.000"	"29.000"	"0.0534464084028469"	"22"	"0"	"0.002345"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYEAEGIAK"	"[K].dYEAEGIAk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"727.39941"	"1453.79155"	"1453.79388"	"-1.60"	"-0.00116"	"8/72"	"8"	"72"	"374373.915222168"	"HCD"	"MS2"	"0"	"33.4"	"100.000"	"55.1313"	"17414"	"17414"	"17386"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.6"	""	"39.4"	""	"50.2"	""	"49.1"	"0.4"	"54.2"	"70.5"	""	"809"	"39"	"36.000"	"29.000"	"0.00470888978896543"	"25"	"0"	"0.0005503"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYEAEGIAK"	"[K].dYEAEGIAk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"485.26889"	"1453.79212"	"1453.79388"	"-1.21"	"-0.00059"	"9/72"	"9"	"72"	"767772.968444824"	"HCD"	"MS2"	"0"	"38.7"	"100.000"	"54.9319"	"17334"	"17334"	"17309"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.3"	""	"50.7"	""	"58.1"	""	"55.1"	"0.2"	"67.7"	"77.7"	""	"816"	"31"	"36.000"	"29.000"	"0.0306662140759428"	"22"	"0.001374"	"0.01734"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSWLGNDDRR"	"[-].mFSWLGNDDRR.[K]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.82788"	"1454.64849"	"1454.64812"	"0.25"	"0.00018"	"5/100"	"5"	"100"	"146007.498596191"	"HCD"	"MS2"	"8.408029"	"3.9"	"100.000"	"82.0661"	"28316"	"28316"	"28297"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.1"	""	"5.6"	""	"5.5"	""	"9.3"	""	"4.0"	"6.9"	"NoQuanLabels"	"197"	"15"	"29.000"	"22.000"	"0.286046231464748"	"13"	"0.004022"	"0.04264"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STYPPSGPTYR"	"[K].sTYPPSGPTYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"727.87634"	"1454.74541"	"1454.74771"	"-1.58"	"-0.00115"	"8/96"	"8"	"96"	"516452.045227051"	"HCD"	"MS2"	"0"	"35.7"	"100.000"	"39.5581"	"11090"	"11090"	"11064"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.2"	""	"43.7"	""	"55.2"	""	"55.9"	""	"70.3"	"67.5"	""	"710"	"25"	"35.000"	"28.000"	"0.11755154812632"	"15"	"0.000936"	"0.01336"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STYPPSGPTYR"	"[K].sTYPPSGPTYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.87701"	"1454.74675"	"1454.74771"	"-0.66"	"-0.00048"	"9/96"	"9"	"96"	"649151.130310059"	"HCD"	"MS2"	"0"	"38.7"	"100.000"	"39.8639"	"11215"	"11215"	"11188"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"51.3"	""	"46.3"	""	"54.6"	""	"71.4"	""	"72.2"	"71.5"	""	"728"	"32"	"35.000"	"28.000"	"0.0219331689331066"	"15"	"0.0001301"	"0.004665"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STYPPSGPTYR"	"[K].sTYPPSGPTYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.87708"	"1454.74687"	"1454.74771"	"-0.57"	"-0.00042"	"8/96"	"8"	"96"	"542393.458557129"	"HCD"	"MS2"	"0"	"30.8"	"100.000"	"40.7453"	"11564"	"11564"	"11541"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.7"	""	"39.2"	""	"48.8"	""	"46.4"	""	"54.4"	"61.0"	""	"728"	"20"	"35.000"	"28.000"	"0.327417119676933"	"14"	"0.001374"	"0.01633"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STYPPSGPTYR"	"[K].sTYPPSGPTYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.87732"	"1454.74736"	"1454.74771"	"-0.24"	"-0.00017"	"8/96"	"8"	"96"	"542933.274658203"	"HCD"	"MS2"	"24.42363"	"36.7"	"100.000"	"39.7153"	"11145"	"11145"	"11117"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.1"	""	"42.7"	""	"45.9"	""	"62.3"	"0.6"	"67.1"	"72.8"	""	"726"	"24"	"35.000"	"28.000"	"0.138965381824007"	"14"	"0.001134"	"0.01369"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STYPPSGPTYR"	"[K].sTYPPSGPTYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.87756"	"1454.74785"	"1454.74771"	"0.10"	"0.00007"	"9/96"	"9"	"96"	"494381.711791992"	"HCD"	"MS2"	"0"	"27.3"	"100.000"	"40.4916"	"11471"	"11471"	"11445"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.1"	""	"34.4"	""	"44.8"	""	"42.5"	""	"46.8"	"55.0"	""	"719"	"30"	"35.000"	"28.000"	"0.0369571859176467"	"14"	"0.0001301"	"0.00396"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STYPPSGPTYR"	"[K].sTYPPSGPTYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.87769"	"1454.74809"	"1454.74771"	"0.26"	"0.00019"	"9/96"	"9"	"96"	"705974.204345703"	"HCD"	"MS2"	"0"	"38.3"	"100.000"	"40.0923"	"11299"	"11299"	"11273"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.2"	""	"46.2"	""	"47.0"	""	"72.3"	""	"70.9"	"74.0"	""	"717"	"31"	"35.000"	"28.000"	"0.0298187311940308"	"14"	"0.0001301"	"0.004602"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STYPPSGPTYR"	"[K].sTYPPSGPTYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.87817"	"1454.74907"	"1454.74771"	"0.94"	"0.00068"	"9/96"	"9"	"96"	"663241.807861328"	"HCD"	"MS2"	"0"	"36.9"	"100.000"	"40.1836"	"11345"	"11345"	"11320"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.5"	""	"49.2"	""	"49.5"	""	"51.2"	""	"69.9"	"82.0"	""	"711"	"31"	"35.000"	"28.000"	"0.0313934904598799"	"14"	"0.0001301"	"0.004971"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STYPPSGPTYR"	"[K].sTYPPSGPTYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.87885"	"1454.75041"	"1454.74771"	"1.86"	"0.00135"	"9/96"	"9"	"96"	"634005.764953613"	"HCD"	"MS2"	"0"	"34.7"	"100.000"	"40.4278"	"11436"	"11436"	"11410"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.2"	""	"48.1"	""	"44.2"	""	"54.7"	""	"60.9"	"73.7"	""	"717"	"28"	"35.000"	"28.000"	"0.0553973716574522"	"14"	"0"	"0.00286"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEFGPPGPGPGSR"	"[R].aEFGPPGPGPGSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"727.88275"	"1454.75823"	"1454.75894"	"-0.49"	"-0.00036"	"16/116"	"16"	"116"	"1107631.93615723"	"HCD"	"MS2"	"11.98498"	"54.1"	"100.000"	"49.4935"	"15131"	"15131"	"15110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.3"	""	"75.1"	""	"84.7"	""	"89.2"	""	"88.4"	"89.8"	""	"762"	"54"	"35.000"	"28.000"	"0.000146867254270659"	"23"	"0"	"1.046E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEFGPPGPGPGSR"	"[R].aEFGPPGPGPGSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"727.88275"	"1454.75823"	"1454.75894"	"-0.49"	"-0.00036"	"16/116"	"16"	"116"	"1616313.87457275"	"HCD"	"MS2"	"8.753851"	"69.4"	"100.000"	"49.9109"	"15290"	"15290"	"15262"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"114.6"	""	"110.4"	""	"102.9"	""	"108.7"	""	"100.6"	"120.0"	""	"762"	"51"	"35.000"	"28.000"	"0.0002910214335431"	"23"	"0"	"4.762E-05"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEFGPPGPGPGSR"	"[R].aEFGPPGPGPGSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"727.88300"	"1454.75871"	"1454.75894"	"-0.16"	"-0.00011"	"10/116"	"10"	"116"	"2989200.72540283"	"HCD"	"MS2"	"0"	"114.6"	"100.000"	"49.7955"	"15255"	"15255"	"15238"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"193.3"	""	"168.3"	""	"172.0"	""	"167.5"	"4.1"	"185.7"	"192.1"	""	"786"	"65"	"35.000"	"28.000"	"1.17325536923476E-05"	"26"	"0"	"5.619E-08"	"1.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEFGPPGPGPGSR"	"[R].aEFGPPGPGPGSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"727.88336"	"1454.75945"	"1454.75894"	"0.35"	"0.00025"	"15/116"	"15"	"116"	"2469298.85168457"	"HCD"	"MS2"	"0"	"107.2"	"100.000"	"50.2015"	"15408"	"15408"	"15390"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"184.1"	""	"150.4"	""	"168.1"	""	"157.8"	""	"173.9"	"181.1"	""	"778"	"52"	"35.000"	"28.000"	"0.00027412560382822"	"23"	"0"	"6.649E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAPDADELPR"	"[K].lEAPDADELPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"485.59409"	"1454.76770"	"1454.76884"	"-0.78"	"-0.00038"	"8/92"	"8"	"92"	"477353.629211426"	"HCD"	"MS2"	"45.17606"	"11.9"	"100.000"	"71.1971"	"23931"	"23931"	"23905"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.3"	""	"16.0"	""	"16.6"	""	"21.6"	""	"17.4"	"25.3"	""	"796"	"45"	"35.000"	"29.000"	"0.0013424034884623"	"15"	"0"	"0.0009626"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAPDADELPR"	"[K].lEAPDADELPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.9434"	"0.0000"	"1"	"1"	"1"	"727.88751"	"1454.76775"	"1454.76884"	"-0.75"	"-0.00055"	"8/92"	"8"	"92"	"746892.178588867"	"HCD"	"MS2"	"7.144238"	"34.8"	"100.000"	"70.9874"	"23831"	"23831"	"23813"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.5"	""	"42.0"	""	"53.9"	""	"48.6"	""	"56.1"	"62.0"	""	"794"	"53"	"35.000"	"28.000"	"0.000209792764954747"	"19"	"0"	"0.0008995"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAPDADELPR"	"[K].lEAPDADELPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.9623"	"0.0000"	"1"	"1"	"1"	"727.88776"	"1454.76824"	"1454.76884"	"-0.41"	"-0.00030"	"8/92"	"8"	"92"	"760146.770080566"	"HCD"	"MS2"	"0"	"34.9"	"100.000"	"70.8729"	"23798"	"23798"	"23779"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.3"	""	"38.8"	""	"48.8"	""	"50.7"	""	"61.2"	"66.3"	""	"801"	"53"	"36.000"	"29.000"	"0.000202582777132247"	"18"	"0"	"0.0001496"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAPDADELPR"	"[K].lEAPDADELPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.9649"	"0.0000"	"1"	"1"	"1"	"727.88776"	"1454.76824"	"1454.76884"	"-0.41"	"-0.00030"	"8/92"	"8"	"92"	"1909439.10351563"	"HCD"	"MS2"	"0"	"78.7"	"100.000"	"71.1810"	"23924"	"23924"	"23905"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"150.8"	""	"104.3"	""	"101.2"	""	"115.7"	""	"146.4"	"130.3"	""	"801"	"57"	"36.000"	"29.000"	"7.70198237428519E-05"	"18"	"0"	"2.75E-06"	"1.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAPDADELPR"	"[K].lEAPDADELPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.9149"	"0.0000"	"1"	"1"	"1"	"485.59457"	"1454.76917"	"1454.76884"	"0.23"	"0.00011"	"8/92"	"8"	"92"	"476034.740234375"	"HCD"	"MS2"	"39.34787"	"12.2"	"100.000"	"71.3163"	"23966"	"23966"	"23939"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.3"	""	"13.4"	""	"18.9"	""	"19.7"	""	"27.6"	"19.7"	""	"779"	"47"	"35.000"	"28.000"	"0.000821310664399016"	"20"	"0"	"0.0009058"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAPDADELPR"	"[K].lEAPDADELPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.9455"	"0.0000"	"1"	"1"	"1"	"727.88831"	"1454.76933"	"1454.76884"	"0.34"	"0.00025"	"8/92"	"8"	"92"	"1991512.26599121"	"HCD"	"MS2"	"0"	"79.1"	"100.000"	"71.2979"	"23958"	"23958"	"23939"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"154.4"	""	"102.7"	""	"101.6"	""	"116.5"	"0.7"	"139.1"	"133.2"	""	"779"	"55"	"35.000"	"28.000"	"0.000129272891216742"	"19"	"0"	"8.563E-06"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASHLELNNGTK"	"[M].aSHLELNNGTk.[M]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"727.89185"	"1454.77641"	"1454.78007"	"-2.51"	"-0.00183"	"7/104"	"7"	"104"	"2858165.54296875"	"HCD"	"MS2"	"0"	"132.3"	"100.000"	"45.8065"	"13629"	"13629"	"13611"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"212.3"	""	"191.6"	""	"168.1"	""	"184.5"	"0.4"	"242.1"	"254.4"	""	"802"	"48"	"36.000"	"29.000"	"0.000575631262774816"	"26"	"0"	"0.0005471"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPEEYEK"	"[R].tTPEEYEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"727.89258"	"1454.77788"	"1454.77790"	"-0.01"	"-0.00001"	"7/68"	"7"	"68"	"1498563.76403809"	"HCD"	"MS2"	"0"	"135.0"	"100.000"	"41.8516"	"12023"	"12023"	"12001"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"147.2"	""	"125.1"	""	"184.1"	""	"248.6"	""	"310.4"	"270.6"	""	"784"	"30"	"35.000"	"28.000"	"0.0372637079113262"	"16"	"0.008052"	"0.09909"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASHLELNNGTK"	"[M].aSHLELNNGTk.[M]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"727.89355"	"1454.77983"	"1454.78007"	"-0.17"	"-0.00012"	"7/104"	"7"	"104"	"590036.637084961"	"HCD"	"MS2"	"0"	"37.9"	"100.000"	"46.1268"	"13760"	"13760"	"13737"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.6"	""	"46.5"	""	"52.8"	""	"60.0"	""	"71.4"	"77.5"	""	"786"	"48"	"35.000"	"28.000"	"0.000646238087223467"	"25"	"0"	"0.001397"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASHLELNNGTK"	"[M].aSHLELNNGTk.[M]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"727.89355"	"1454.77983"	"1454.78007"	"-0.17"	"-0.00012"	"8/104"	"8"	"104"	"636179.087463379"	"HCD"	"MS2"	"0"	"39.8"	"100.000"	"46.2785"	"13810"	"13810"	"13789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"69.9"	""	"41.5"	""	"51.9"	""	"53.7"	""	"84.6"	"78.7"	""	"786"	"40"	"35.000"	"28.000"	"0.00361736681698996"	"25"	"0"	"0.001703"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASHLELNNGTK"	"[M].aSHLELNNGTk.[M]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"727.89355"	"1454.77983"	"1454.78007"	"-0.17"	"-0.00012"	"7/104"	"7"	"104"	"2720724.41809082"	"HCD"	"MS2"	"0"	"126.4"	"100.000"	"45.9700"	"13684"	"13684"	"13661"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"193.7"	""	"165.1"	""	"166.7"	""	"179.7"	""	"232.5"	"262.0"	""	"786"	"48"	"35.000"	"28.000"	"0.000589376140352432"	"26"	"0"	"0.0004674"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDAAYTNK"	"[K].dVDAAYTNk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"485.60019"	"1454.78601"	"1454.78913"	"-2.14"	"-0.00104"	"10/78"	"10"	"78"	"2858350.77990723"	"HCD"	"MS2"	"32.13634"	"89.0"	"100.000"	"47.5280"	"14319"	"14319"	"14289"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"109.9"	""	"74.9"	""	"97.2"	""	"178.8"	""	"178.2"	"206.7"	""	"768"	"35"	"35.000"	"28.000"	"0.0123974174273765"	"17"	"0"	"0.003296"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDAAYTNK"	"[K].dVDAAYTNk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"3"	"3"	"0.6842"	"0.0000"	"1"	"1"	"1"	"485.60074"	"1454.78766"	"1454.78913"	"-1.01"	"-0.00049"	"9/78"	"9"	"78"	"3843643.19744873"	"HCD"	"MS2"	"30.79469"	"112.4"	"100.000"	"47.2870"	"14232"	"14232"	"14206"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"143.5"	""	"86.6"	""	"116.2"	""	"208.3"	""	"231.4"	"285.2"	""	"781"	"38"	"35.000"	"28.000"	"0.00675493288273498"	"26"	"0.0003538"	"0.006167"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDAAYTNK"	"[K].dVDAAYTNk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"727.89801"	"1454.78874"	"1454.78913"	"-0.27"	"-0.00019"	"13/78"	"13"	"78"	"2374684.6171875"	"HCD"	"MS2"	"3.534789"	"201.3"	"100.000"	"47.2756"	"14227"	"14227"	"14206"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"221.5"	""	"141.2"	""	"179.0"	""	"457.5"	""	"418.8"	"497.9"	""	"786"	"43"	"35.000"	"28.000"	"0.00188969863940743"	"18"	"0"	"0.0005824"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDAAYTNK"	"[K].dVDAAYTNk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"727.89850"	"1454.78972"	"1454.78913"	"0.41"	"0.00030"	"8/78"	"8"	"78"	"1997675.31097412"	"HCD"	"MS2"	"6.996456"	"179.5"	"100.000"	"47.5444"	"14325"	"14325"	"14305"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"185.4"	""	"132.4"	""	"165.1"	""	"433.7"	""	"358.8"	"434.0"	""	"770"	"54"	"35.000"	"28.000"	"0.000154689462176842"	"20"	"0"	"0.0003119"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPWVSVQPR"	"[K].eQPWVSVQPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"727.89990"	"1454.79253"	"1454.79533"	"-1.93"	"-0.00140"	"7/98"	"7"	"98"	"398312.113952637"	"HCD"	"MS2"	"40.53529"	"32.2"	"100.000"	"62.9175"	"20548"	"20548"	"20522"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.9"	""	"43.3"	""	"38.5"	""	"52.8"	""	"63.4"	"67.3"	""	"779"	"35"	"35.000"	"28.000"	"0.0129570896008015"	"22"	"0.001812"	"0.02038"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPWVSVQPR"	"[K].eQPWVSVQPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"727.90076"	"1454.79424"	"1454.79533"	"-0.75"	"-0.00055"	"9/98"	"9"	"98"	"231015.146606445"	"HCD"	"MS2"	"12.6703"	"17.9"	"100.000"	"63.1854"	"20672"	"20672"	"20649"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.9"	""	"19.7"	""	"24.0"	""	"33.3"	""	"33.6"	"36.2"	""	"763"	"18"	"35.000"	"28.000"	"0.55525763924202"	"18"	"0.00912"	"0.1181"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPWVSVQPR"	"[K].eQPWVSVQPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"727.90076"	"1454.79424"	"1454.79533"	"-0.75"	"-0.00055"	"7/98"	"7"	"98"	"513499.159912109"	"HCD"	"MS2"	"14.96163"	"33.9"	"100.000"	"62.8399"	"20532"	"20532"	"20510"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.7"	""	"40.5"	""	"46.2"	""	"57.8"	""	"59.9"	"69.5"	""	"763"	"40"	"35.000"	"28.000"	"0.00419270727743506"	"19"	"0"	"0.0001506"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYSSEPNNLR"	"[K].fYSSEPNNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVG2"	"Band 4.1-like protein 5 OS=Rattus norvegicus OX=10116 GN=Epb41l5 PE=2 SV=2"	"Q5FVG2"	"Band 4.1-like protein 5 OS=Rattus norvegicus OX=10116 GN=Epb41l5 PE=2 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"728.37402"	"1455.74077"	"1455.74296"	"-1.50"	"-0.00109"	"6/82"	"6"	"82"	"255763.540710449"	"HCD"	"MS2"	"0"	"22.6"	"100.000"	"54.2284"	"17052"	"17052"	"17024"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.3"	""	"21.5"	""	"26.3"	""	"46.9"	""	"48.0"	"45.0"	""	"665"	"11"	"35.000"	"28.000"	"2.92274986846269"	"18"	"0.006769"	"0.07698"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYSSEPNNLR"	"[K].fYSSEPNNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVG2"	"Band 4.1-like protein 5 OS=Rattus norvegicus OX=10116 GN=Epb41l5 PE=2 SV=2"	"Q5FVG2"	"Band 4.1-like protein 5 OS=Rattus norvegicus OX=10116 GN=Epb41l5 PE=2 SV=2"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"728.37402"	"1455.74077"	"1455.74296"	"-1.50"	"-0.00109"	"4/82"	"4"	"82"	"317096.534667969"	"HCD"	"MS2"	"0"	"23.9"	"100.000"	"53.9840"	"16963"	"16963"	"16939"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.0"	""	"28.1"	""	"26.2"	""	"51.5"	""	"49.5"	"44.6"	""	"665"	"17"	"35.000"	"28.000"	"0.614881815810211"	"21"	"0.002937"	"0.02763"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASHLELNNGTK"	"[M].aSHLELNnGTk.[M]"	"N-Term(Prot)(Acetyl); N8(Deamidated); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"1"	"728.38483"	"1455.76238"	"1455.76409"	"-1.18"	"-0.00086"	"6/104"	"6"	"104"	"794295.515808105"	"HCD"	"MS2"	"0"	"40.0"	"100.000"	"50.5652"	"15557"	"15557"	"15534"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"69.0"	""	"46.5"	""	"53.9"	""	"61.8"	"0.5"	"70.4"	"76.2"	""	"760"	"48"	"35.000"	"28.000"	"0.000661886611888813"	"20"	"0"	"0.001315"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASHLELNNGTK"	"[M].aSHLELNnGTk.[M]"	"N-Term(Prot)(Acetyl); N8(Deamidated); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.2917"	"0.0000"	"1"	"1"	"1"	"728.38489"	"1455.76250"	"1455.76409"	"-1.09"	"-0.00080"	"6/104"	"6"	"104"	"1051759.26989746"	"HCD"	"MS2"	"0"	"50.6"	"100.000"	"50.2328"	"15433"	"15433"	"15408"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"82.2"	""	"67.9"	""	"63.9"	""	"78.0"	""	"90.7"	"100.2"	""	"756"	"48"	"35.000"	"28.000"	"0.000625881046191481"	"20"	"0"	"0.000995"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASHLELNNGTK"	"[M].aSHLELNnGTk.[M]"	"N-Term(Prot)(Acetyl); N8(Deamidated); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.2449"	"0.0000"	"1"	"1"	"1"	"728.38531"	"1455.76335"	"1455.76409"	"-0.51"	"-0.00037"	"7/104"	"7"	"104"	"393699.115356445"	"HCD"	"MS2"	"0"	"24.2"	"100.000"	"50.5615"	"15566"	"15566"	"15543"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.1"	""	"29.6"	""	"33.2"	""	"39.1"	"2.0"	"46.8"	"46.6"	""	"770"	"49"	"35.000"	"28.000"	"0.000440008158894062"	"24"	"0"	"0.0006201"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASHLELNNGTK"	"[M].aSHLELNnGTk.[M]"	"N-Term(Prot)(Acetyl); N8(Deamidated); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.2941"	"0.0000"	"1"	"1"	"1"	"485.92612"	"1455.76380"	"1455.76409"	"-0.20"	"-0.00010"	"8/104"	"8"	"104"	"1187829.23657227"	"HCD"	"MS2"	"15.13141"	"36.7"	"100.000"	"50.7536"	"15634"	"15634"	"15608"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.7"	"2.0"	"50.0"	""	"49.2"	""	"58.2"	"0.6"	"68.6"	"68.3"	""	"770"	"17"	"35.000"	"28.000"	"0.697365935658546"	"14"	"0.004282"	"0.04616"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ASHLELNNGTK"	"[M].aSHLELNnGTk.[M]"	"N-Term(Prot)(Acetyl); N8(Deamidated); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.0370"	"0.0000"	"1"	"1"	"1"	"485.92618"	"1455.76398"	"1455.76409"	"-0.07"	"-0.00004"	"10/104"	"10"	"104"	"1267304.94659424"	"HCD"	"MS2"	"26.86241"	"39.0"	"100.000"	"50.3478"	"15479"	"15479"	"15464"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"51.9"	""	"53.9"	""	"53.2"	""	"58.8"	""	"75.6"	"77.0"	""	"770"	"27"	"35.000"	"28.000"	"0.0759382753404218"	"21"	"0.003967"	"0.04136"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASHLELNNGTK"	"[M].aSHLELnNGTk.[M]"	"N-Term(Prot)(Acetyl); N7(Deamidated); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"728.38599"	"1455.76470"	"1455.76409"	"0.42"	"0.00030"	"7/104"	"7"	"104"	"180229.52923584"	"HCD"	"MS2"	"0"	"16.4"	"100.000"	"52.3798"	"16308"	"16308"	"16283"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.0"	""	"15.3"	""	"19.0"	""	"34.1"	""	"34.7"	"40.3"	""	"754"	"18"	"35.000"	"28.000"	"0.578550602515334"	"20"	"0.00557"	"0.06291"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASHLELNNGTK"	"[M].aSHLELNnGTk.[M]"	"N-Term(Prot)(Acetyl); N8(Deamidated); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.2449"	"0.0000"	"1"	"1"	"1"	"728.38599"	"1455.76470"	"1455.76409"	"0.42"	"0.00030"	"8/104"	"8"	"104"	"527996.625976563"	"HCD"	"MS2"	"0"	"28.5"	"100.000"	"50.8894"	"15688"	"15688"	"15674"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.1"	""	"29.2"	""	"38.6"	""	"43.3"	""	"53.8"	"67.7"	""	"754"	"49"	"35.000"	"28.000"	"0.000492426424825704"	"23"	"0"	"0.0004237"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEDMLEK"	"[R].fAEDmLEk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"728.88995"	"1456.77263"	"1456.77579"	"-2.17"	"-0.00158"	"7/64"	"7"	"64"	"223192.246948242"	"HCD"	"MS2"	"0"	"18.3"	"100.000"	"67.1971"	"22286"	"22286"	"22258"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.7"	""	"17.8"	""	"21.1"	""	"43.0"	""	"37.0"	"35.2"	""	"688"	"23"	"35.000"	"28.000"	"0.177647231029592"	"15"	"0.008668"	"0.1106"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPASPVQSPTR"	"[K].sTPASPVQSPTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q05764"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4"	"Q05764"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.90112"	"1456.79497"	"1456.79572"	"-0.52"	"-0.00038"	"14/116"	"14"	"116"	"338881.004821777"	"HCD"	"MS2"	"0"	"17.2"	"100.000"	"33.0208"	"8441"	"8441"	"8411"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.0"	""	"17.2"	""	"11.8"	""	"54.7"	""	"36.4"	"27.5"	""	"731"	"47"	"35.000"	"28.000"	"0.000792295850311598"	"15"	"0"	"0.001813"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPASPVQSPTR"	"[K].sTPASPVQSPTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q05764"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4"	"Q05764"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.90137"	"1456.79546"	"1456.79572"	"-0.18"	"-0.00013"	"6/116"	"6"	"116"	"266381.390991211"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"32.9957"	"8424"	"8424"	"8401"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.4"	""	"12.1"	""	"11.7"	""	"46.9"	""	"30.5"	"23.2"	""	"731"	"28"	"35.000"	"28.000"	"0.0619280466063498"	"14"	"0.0008629"	"0.01053"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTQEYAAK"	"[K].tSTQEYAAk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"0"	"2"	"2"	"0.9808"	"0.0000"	"1"	"1"	"1"	"728.90424"	"1456.80120"	"1456.80478"	"-2.46"	"-0.00179"	"8/82"	"8"	"82"	"489466.007568359"	"HCD"	"MS2"	"0"	"45.6"	"100.000"	"34.8390"	"9169"	"9169"	"9147"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.1"	""	"63.0"	""	"55.7"	""	"63.6"	"0.3"	"95.2"	"88.4"	""	"715"	"52"	"35.000"	"28.000"	"0.000232421364297655"	"17"	"0"	"0.0001855"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTQEYAAK"	"[K].tSTQEYAAk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"728.90607"	"1456.80486"	"1456.80478"	"0.05"	"0.00004"	"8/82"	"8"	"82"	"498481.231201172"	"HCD"	"MS2"	"0"	"45.8"	"100.000"	"34.7410"	"9135"	"9135"	"9115"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.7"	""	"50.3"	""	"63.9"	""	"75.5"	""	"83.2"	"91.6"	""	"729"	"52"	"35.000"	"28.000"	"0.000245865466095893"	"20"	"0"	"0.0001424"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATELPDAELR"	"[K].lATELPDAELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"0"	"2"	"2"	"0.9815"	"0.0000"	"1"	"1"	"1"	"728.91382"	"1456.82036"	"1456.82087"	"-0.35"	"-0.00026"	"8/92"	"8"	"92"	"448733.958984375"	"HCD"	"MS2"	"0"	"22.1"	"100.000"	"83.0827"	"28716"	"28716"	"28705"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.7"	""	"24.0"	""	"30.3"	""	"35.0"	""	"49.5"	"43.9"	""	"736"	"54"	"35.000"	"28.000"	"0.000133305423417345"	"17"	"0"	"0.0005062"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATELPDAELR"	"[K].lATELPDAELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"728.91406"	"1456.82085"	"1456.82087"	"-0.02"	"-0.00001"	"12/92"	"12"	"92"	"233882.363586426"	"HCD"	"MS2"	"18.65021"	"12.6"	"100.000"	"82.8564"	"28630"	"28630"	"28613"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.0"	""	"12.7"	""	"17.9"	""	"19.4"	""	"23.8"	"25.5"	""	"737"	"33"	"35.000"	"28.000"	"0.0180068394417834"	"15"	"0"	"0.002809"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATELPDAELR"	"[K].lATELPDAELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"728.91443"	"1456.82158"	"1456.82087"	"0.48"	"0.00035"	"7/92"	"7"	"92"	"306564.471069336"	"HCD"	"MS2"	"0"	"14.2"	"100.000"	"83.1574"	"28747"	"28747"	"28733"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.5"	""	"12.3"	""	"19.4"	""	"23.1"	""	"28.6"	"33.5"	""	"740"	"42"	"35.000"	"28.000"	"0.00255977459240006"	"18"	"0"	"0.001466"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATELPDAELR"	"[K].lATELPDAELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"728.91443"	"1456.82158"	"1456.82087"	"0.48"	"0.00035"	"11/92"	"11"	"92"	"205932.602722168"	"HCD"	"MS2"	"13.40314"	"10.3"	"100.000"	"82.8095"	"28610"	"28610"	"28590"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.1"	""	"10.1"	""	"13.0"	""	"18.4"	""	"22.3"	"17.5"	""	"740"	"34"	"35.000"	"28.000"	"0.0134338880264938"	"21"	"0"	"0.002335"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDVTWEEMR"	"[R].yDVTWEEMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNG0"	"ER membrane protein complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Emc2 PE=2 SV=1"	"B0BNG0"	"ER membrane protein complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Emc2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"5"	"729.34991"	"1457.69255"	"1457.69323"	"-0.47"	"-0.00034"	"8/74"	"8"	"74"	"130271.329711914"	"HCD"	"MS2"	"50.40366"	"11.2"	"100.000"	"81.1528"	"27947"	"27947"	"27927"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.2"	""	"12.1"	""	"12.1"	""	"22.2"	""	"22.0"	"21.2"	""	"373"	"5"	"32.000"	"25.000"	"5.8167290743352"	"13"	"0.008478"	"0.1028"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFTDFTDVR"	"[R].nNFTDFTDVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K3P7"	"Histidine triad nucleotide-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hint3 PE=2 SV=2"	"Q8K3P7"	"Histidine triad nucleotide-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hint3 PE=2 SV=2"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"729.36462"	"1457.72197"	"1457.72222"	"-0.17"	"-0.00013"	"6/98"	"6"	"98"	"429342.112854004"	"HCD"	"MS2"	"6.6215"	"26.7"	"100.000"	"74.0738"	"25087"	"25087"	"25070"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.6"	""	"32.0"	""	"29.3"	""	"48.9"	""	"52.4"	"52.3"	""	"504"	"41"	"34.000"	"27.000"	"0.00221513674241383"	"17"	"0"	"0.002689"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFTDFTDVR"	"[R].nNFTDFTDVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K3P7"	"Histidine triad nucleotide-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hint3 PE=2 SV=2"	"Q8K3P7"	"Histidine triad nucleotide-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hint3 PE=2 SV=2"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"729.36462"	"1457.72197"	"1457.72222"	"-0.17"	"-0.00013"	"8/98"	"8"	"98"	"455786.961975098"	"HCD"	"MS2"	"18.2087"	"27.0"	"100.000"	"73.9179"	"25037"	"25037"	"25014"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.5"	""	"31.4"	""	"30.6"	""	"51.0"	""	"45.8"	"57.5"	""	"504"	"39"	"34.000"	"27.000"	"0.00351884826986096"	"20"	"0"	"0.0004707"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGTDPEDVIR"	"[K].lNGTDPEDVIR.[N]"	"N-Term(TMT6plex)"	"1"	"3"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; Q64122; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light polypeptide 9 OS=Rattus norvegicus OX=10116 GN=Myl9 PE=1 SV=2; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"729.39270"	"1457.77812"	"1457.77974"	"-1.11"	"-0.00081"	"8/106"	"8"	"106"	"806475.04510498"	"HCD"	"MS2"	"14.22414"	"40.3"	"100.000"	"68.0167"	"22634"	"22634"	"22610"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.2"	""	"50.6"	""	"47.5"	""	"78.7"	""	"77.9"	"77.6"	""	"843"	"39"	"36.000"	"29.000"	"0.00595384575058491"	"22"	"0"	"0.001854"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGTDPEDVIR"	"[K].lNGTDPEDVIR.[N]"	"N-Term(TMT6plex)"	"1"	"3"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; Q64122; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light polypeptide 9 OS=Rattus norvegicus OX=10116 GN=Myl9 PE=1 SV=2; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"729.39307"	"1457.77886"	"1457.77974"	"-0.61"	"-0.00044"	"11/106"	"11"	"106"	"407809.684020996"	"HCD"	"MS2"	"26.27727"	"23.6"	"100.000"	"68.3628"	"22775"	"22775"	"22751"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.2"	""	"27.2"	""	"29.3"	""	"48.4"	""	"46.9"	"42.6"	""	"840"	"12"	"36.000"	"29.000"	"2.76853036002615"	"14"	"0.004942"	"0.05523"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGTDPEDVIR"	"[K].lNGTDPEDVIR.[N]"	"N-Term(TMT6plex)"	"1"	"3"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; Q64122; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light polypeptide 9 OS=Rattus norvegicus OX=10116 GN=Myl9 PE=1 SV=2; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"729.39325"	"1457.77922"	"1457.77974"	"-0.35"	"-0.00026"	"10/106"	"10"	"106"	"354589.342163086"	"HCD"	"MS2"	"19.47022"	"19.5"	"100.000"	"68.5346"	"22831"	"22831"	"22805"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.2"	""	"22.2"	""	"26.9"	""	"37.0"	""	"35.0"	"41.7"	""	"840"	"15"	"36.000"	"29.000"	"1.32510194181734"	"17"	"0.0003538"	"0.007085"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGTDPEDVIR"	"[K].lNGTDPEDVIR.[N]"	"N-Term(TMT6plex)"	"1"	"3"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; Q64122; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light polypeptide 9 OS=Rattus norvegicus OX=10116 GN=Myl9 PE=1 SV=2; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"729.39343"	"1457.77959"	"1457.77974"	"-0.10"	"-0.00007"	"13/106"	"13"	"106"	"792619.296447754"	"HCD"	"MS2"	"0"	"38.5"	"100.000"	"68.1751"	"22684"	"22684"	"22663"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.6"	""	"54.7"	""	"49.9"	""	"71.8"	"1.1"	"71.6"	"65.7"	""	"839"	"39"	"36.000"	"29.000"	"0.00569812490843311"	"24"	"0"	"0.003732"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEIIANDQGNR"	"[KR].vEIIANDQGNR.[TI]"	"N-Term(TMT6plex)"	"3"	"5"	"P63018; P06761; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.4651"	"0.0000"	"1"	"1"	"1"	"486.60141"	"1457.78968"	"1457.79097"	"-0.89"	"-0.00043"	"10/100"	"10"	"100"	"3454632.42254639"	"HCD"	"MS2"	"28.97162"	"51.6"	"100.000"	"50.8265"	"15674"	"15674"	"15651"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.1"	""	"72.6"	""	"73.1"	""	"76.1"	"0.4"	"85.5"	"93.7"	""	"872"	"43"	"36.000"	"29.000"	"0.0023414586321743"	""	"0"	"0.0006945"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEIIANDQGNR"	"[KR].vEIIANDQGNR.[TI]"	"N-Term(TMT6plex)"	"3"	"5"	"P63018; P06761; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.4359"	"0.0000"	"1"	"1"	"1"	"486.60159"	"1457.79023"	"1457.79097"	"-0.51"	"-0.00025"	"9/100"	"9"	"100"	"3598356.39227295"	"HCD"	"MS2"	"30.13508"	"59.7"	"100.000"	"51.1632"	"15800"	"15800"	"15778"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"94.7"	""	"87.4"	""	"86.6"	""	"105.2"	""	"100.1"	"93.7"	""	"871"	"39"	"36.000"	"29.000"	"0.00537017154871189"	""	"0"	"0.002219"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEIIANDQGNR"	"[KR].vEIIANDQGNR.[TI]"	"N-Term(TMT6plex)"	"3"	"5"	"P63018; P06761; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"729.39905"	"1457.79082"	"1457.79097"	"-0.10"	"-0.00008"	"8/100"	"8"	"100"	"3824885.38037109"	"HCD"	"MS2"	"0"	"160.2"	"100.000"	"50.9276"	"15715"	"15715"	"15699"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"345.1"	""	"247.5"	""	"250.0"	""	"210.3"	"1.2"	"219.8"	"236.1"	""	"871"	"40"	"36.000"	"29.000"	"0.00464502610795777"	"26"	"0"	"1.748E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEIIANDQGNR"	"[KR].vEIIANDQGNR.[TI]"	"N-Term(TMT6plex)"	"3"	"5"	"P63018; P06761; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"729.40002"	"1457.79277"	"1457.79097"	"1.24"	"0.00090"	"10/100"	"10"	"100"	"3789500.24633789"	"HCD"	"MS2"	"0"	"154.5"	"100.000"	"51.2600"	"15840"	"15840"	"15826"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"312.6"	""	"248.3"	""	"238.9"	""	"201.5"	""	"231.1"	"234.2"	""	"870"	"37"	"36.000"	"29.000"	"0.00904668058890108"	"24"	"0"	"6.582E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEIIANDQGNR"	"[KR].vEIIANDQGNR.[TI]"	"N-Term(TMT6plex)"	"3"	"5"	"P63018; P06761; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"729.40045"	"1457.79363"	"1457.79097"	"1.82"	"0.00133"	"13/100"	"13"	"100"	"1216462.11706543"	"HCD"	"MS2"	"8.179975"	"59.8"	"100.000"	"50.9674"	"15720"	"15720"	"15698"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.1"	""	"103.1"	""	"96.3"	""	"68.9"	""	"84.4"	"89.0"	""	"881"	"42"	"36.000"	"29.000"	"0.00303351336539654"	"27"	"0"	"5.49E-05"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEIIANDQGNR"	"[KR].vEIIANDQGNR.[TI]"	"N-Term(TMT6plex)"	"3"	"5"	"P63018; P06761; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"729.40063"	"1457.79399"	"1457.79097"	"2.07"	"0.00151"	"13/100"	"13"	"100"	"1149169.17260742"	"HCD"	"MS2"	"10.22957"	"58.3"	"100.000"	"50.6421"	"15599"	"15599"	"15572"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"119.9"	""	"100.1"	""	"92.5"	""	"78.2"	""	"87.0"	"75.1"	""	"875"	"30"	"36.000"	"29.000"	"0.0466635803038238"	"21"	"0"	"0.0003535"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDEGPNGLK"	"[K].gIDEGPNGLk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"729.42102"	"1457.83476"	"1457.83641"	"-1.13"	"-0.00082"	"13/80"	"13"	"80"	"444542.045959473"	"HCD"	"MS2"	"0"	"43.0"	"100.000"	"55.7346"	"17674"	"17674"	"17651"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"115.7"	""	"56.4"	""	"51.6"	""	"53.6"	""	"65.6"	"63.1"	""	"853"	"42"	"36.000"	"29.000"	"0.00296427871451622"	"22"	"0"	"0.001678"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDEGPNGLK"	"[K].gIDEGPNGLk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"729.42151"	"1457.83574"	"1457.83641"	"-0.46"	"-0.00034"	"8/80"	"8"	"80"	"402647.611816406"	"HCD"	"MS2"	"13.78379"	"39.3"	"100.000"	"55.9555"	"17750"	"17750"	"17725"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"105.1"	""	"41.2"	""	"48.2"	""	"55.1"	""	"52.1"	"71.2"	""	"833"	"40"	"36.000"	"29.000"	"0.00464103673240955"	"24"	"0"	"0.002293"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGTDPEDVIR"	"[K].lnGTDPEDVIR.[N]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"3"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; Q64122; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light polypeptide 9 OS=Rattus norvegicus OX=10116 GN=Myl9 PE=1 SV=2; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"729.88379"	"1458.76030"	"1458.76375"	"-2.37"	"-0.00173"	"11/106"	"11"	"106"	"317876.340881348"	"HCD"	"MS2"	"0"	"14.4"	"100.000"	"75.1122"	"25504"	"25504"	"25473"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.4"	""	"13.6"	""	"18.8"	""	"34.7"	""	"25.5"	"29.0"	""	"699"	"24"	"35.000"	"28.000"	"0.150469050366853"	"17"	"0.006505"	"0.0733"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGTDPEDVIR"	"[K].lnGTDPEDVIR.[N]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"3"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; Q64122; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light polypeptide 9 OS=Rattus norvegicus OX=10116 GN=Myl9 PE=1 SV=2; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"729.88470"	"1458.76213"	"1458.76375"	"-1.11"	"-0.00081"	"9/106"	"9"	"106"	"270007.112670898"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"75.4352"	"25634"	"25634"	"25611"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.3"	""	"14.0"	""	"19.3"	""	"31.7"	"1.4"	"34.3"	"24.3"	""	"713"	"24"	"35.000"	"28.000"	"0.144897046847398"	"21"	"0.005119"	"0.05843"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGTDPEDVIR"	"[K].lnGTDPEDVIR.[N]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"3"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; Q64122; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light polypeptide 9 OS=Rattus norvegicus OX=10116 GN=Myl9 PE=1 SV=2; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"729.88470"	"1458.76213"	"1458.76375"	"-1.11"	"-0.00081"	"7/106"	"7"	"106"	"305999.663818359"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"74.9644"	"25455"	"25455"	"25438"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.2"	""	"13.4"	""	"20.6"	""	"34.9"	""	"30.1"	"29.9"	""	"713"	"34"	"35.000"	"28.000"	"0.0158146481561556"	"22"	"0.0004639"	"0.007728"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGTDPEDVIR"	"[K].lnGTDPEDVIR.[N]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"3"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; Q64122; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light polypeptide 9 OS=Rattus norvegicus OX=10116 GN=Myl9 PE=1 SV=2; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"729.88501"	"1458.76274"	"1458.76375"	"-0.69"	"-0.00051"	"10/106"	"10"	"106"	"224176.691223145"	"HCD"	"MS2"	"17.46684"	"12.3"	"100.000"	"75.3066"	"25593"	"25593"	"25566"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.6"	""	"13.9"	""	"11.2"	""	"27.3"	""	"25.6"	"24.0"	""	"704"	"15"	"35.000"	"28.000"	"1.24894313010219"	"19"	"0.007627"	"0.09081"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGTDPEDVIR"	"[K].lnGTDPEDVIR.[N]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"3"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; Q64122; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light polypeptide 9 OS=Rattus norvegicus OX=10116 GN=Myl9 PE=1 SV=2; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"729.88538"	"1458.76348"	"1458.76375"	"-0.19"	"-0.00014"	"11/106"	"11"	"106"	"317278.864501953"	"HCD"	"MS2"	"52.37996"	"17.0"	"100.000"	"73.5479"	"24874"	"24874"	"24843"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.6"	""	"13.3"	""	"19.4"	""	"35.4"	""	"35.7"	"40.0"	""	"706"	"25"	"35.000"	"28.000"	"0.120997028650897"	"14"	"0"	"0.002737"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGTDPEDVIR"	"[K].lnGTDPEDVIR.[N]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"3"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; Q64122; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light polypeptide 9 OS=Rattus norvegicus OX=10116 GN=Myl9 PE=1 SV=2; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"729.88599"	"1458.76470"	"1458.76375"	"0.65"	"0.00047"	"8/106"	"8"	"106"	"262353.29095459"	"HCD"	"MS2"	"31.26884"	"18.9"	"100.000"	"73.4151"	"24833"	"24833"	"24807"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.8"	""	"16.5"	""	"24.4"	""	"39.4"	""	"39.8"	"38.6"	""	"711"	"11"	"35.000"	"28.000"	"2.81086252253938"	"13"	"0.00413"	"0.0453"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSPTVVVEDLR"	"[K].dSPTVVVEDLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVC7"	"Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Acap2 PE=1 SV=1"	"Q5FVC7"	"Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Acap2 PE=1 SV=1"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"729.90369"	"1458.80010"	"1458.80014"	"-0.03"	"-0.00002"	"7/96"	"7"	"96"	"242712.852294922"	"HCD"	"MS2"	"49.41157"	"16.1"	"100.000"	"74.5166"	"25267"	"25267"	"25248"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.1"	""	"12.5"	""	"23.6"	""	"28.6"	""	"34.6"	"27.4"	""	"776"	"37"	"35.000"	"28.000"	"0.00717516224163494"	"21"	"0.000936"	"0.01246"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSPTVVVEDLR"	"[K].dSPTVVVEDLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVC7"	"Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Acap2 PE=1 SV=1"	"Q5FVC7"	"Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Acap2 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"729.90393"	"1458.80058"	"1458.80014"	"0.31"	"0.00022"	"6/96"	"6"	"96"	"256004.845947266"	"HCD"	"MS2"	"48.93889"	"17.3"	"100.000"	"74.3677"	"25220"	"25220"	"25201"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.9"	""	"16.2"	""	"21.1"	""	"31.5"	""	"33.7"	"39.6"	""	"772"	"26"	"35.000"	"28.000"	"0.104372792854601"	"16"	"0.003922"	"0.03987"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].VNSGAFPAPIEk.[S]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"729.91125"	"1458.81523"	"1458.81540"	"-0.11"	"-0.00008"	"6/124"	"6"	"124"	"489291.557495117"	"HCD"	"MS2"	"0"	"22.8"	"100.000"	"64.3642"	"21137"	"21137"	"21115"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.2"	""	"33.9"	""	"32.9"	""	"37.9"	""	"36.8"	"38.6"	""	"836"	"40"	"36.000"	"29.000"	"0.0042479195361995"	""	"0.0003538"	"0.006297"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].VNSGAFPAPIEk.[S]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"729.91132"	"1458.81536"	"1458.81540"	"-0.03"	"-0.00002"	"6/124"	"6"	"124"	"547868.841918945"	"HCD"	"MS2"	"4.06017"	"23.9"	"100.000"	"64.6594"	"21257"	"21257"	"21239"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.6"	""	"34.7"	""	"37.5"	""	"37.1"	"1.0"	"34.7"	"49.1"	""	"827"	"37"	"36.000"	"29.000"	"0.00777097503748151"	"29"	"0.0003538"	"0.006942"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].VNSGAFPAPIEk.[S]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"729.91138"	"1458.81548"	"1458.81540"	"0.06"	"0.00004"	"6/124"	"6"	"124"	"595791.206176758"	"HCD"	"MS2"	"0"	"23.3"	"100.000"	"64.5681"	"21234"	"21234"	"21215"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.2"	""	"35.4"	""	"35.2"	""	"40.3"	"1.2"	"37.7"	"38.7"	""	"821"	"37"	"36.000"	"29.000"	"0.00766148863087632"	"29"	"0.00263"	"0.02567"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].VNSGAFPAPIEk.[S]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"729.91156"	"1458.81584"	"1458.81540"	"0.31"	"0.00022"	"7/124"	"7"	"124"	"478319.711914063"	"HCD"	"MS2"	"0"	"21.8"	"100.000"	"64.2732"	"21114"	"21114"	"21097"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.2"	""	"27.4"	""	"36.4"	""	"30.9"	"0.7"	"38.2"	"36.3"	""	"809"	"34"	"36.000"	"29.000"	"0.0162150587280244"	"26"	"0.006505"	"0.07357"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDEGPNGLK"	"[K].gIDEGPnGLk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"486.94415"	"1458.81791"	"1458.82043"	"-1.73"	"-0.00084"	"13/80"	"13"	"80"	"3681368.98217773"	"HCD"	"MS2"	"32.12296"	"133.4"	"100.000"	"59.7687"	"19305"	"19305"	"19286"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"198.8"	""	"174.6"	""	"171.1"	""	"216.7"	"1.3"	"235.6"	"265.9"	""	"816"	"28"	"36.000"	"29.000"	"0.0683376693418787"	"18"	"0.0001301"	"0.004498"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDEGPNGLK"	"[K].gIDEGPnGLk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"0.8431"	"0.0000"	"1"	"1"	"1"	"729.91260"	"1458.81792"	"1458.82043"	"-1.72"	"-0.00126"	"8/80"	"8"	"80"	"4425517.72735596"	"HCD"	"MS2"	"6.638226"	"357.3"	"95.341"	"59.5594"	"19234"	"19234"	"19218"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"566.7"	""	"448.4"	""	"472.3"	""	"571.0"	"14.5"	"633.3"	"678.4"	""	"816"	"51"	"36.000"	"29.000"	"0.000326332376042868"	"23"	"0"	"6.427E-05"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDEGPNGLK"	"[K].gIDEGPnGLk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"729.91266"	"1458.81804"	"1458.82043"	"-1.64"	"-0.00119"	"7/80"	"7"	"80"	"2628731.21398926"	"HCD"	"MS2"	"0"	"225.0"	"100.000"	"59.8329"	"19330"	"19330"	"19320"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"370.2"	""	"282.7"	""	"311.3"	""	"370.2"	"8.8"	"379.1"	"406.9"	""	"812"	"49"	"36.000"	"29.000"	"0.000459754547473636"	"22"	"0"	"0.0001504"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDEGPNGLK"	"[K].gIDEGPnGLk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"486.94434"	"1458.81845"	"1458.82043"	"-1.35"	"-0.00066"	"6/80"	"6"	"80"	"3645822.8850708"	"HCD"	"MS2"	"60.28171"	"124.7"	"100.000"	"59.5274"	"19221"	"19221"	"19206"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"195.6"	""	"154.9"	""	"160.5"	""	"202.8"	"1.8"	"227.6"	"238.1"	""	"810"	"32"	"36.000"	"29.000"	"0.0282784123651254"	"19"	"0"	"0.003592"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DASPGSPLEK"	"[K].dASPGSPLEk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P22791"	"Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcs2 PE=1 SV=1"	"P22791"	"Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcs2 PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"729.91351"	"1458.81975"	"1458.82043"	"-0.47"	"-0.00034"	"9/88"	"9"	"88"	"658099.175964355"	"HCD"	"MS2"	"0"	"55.8"	"100.000"	"48.8821"	"14870"	"14870"	"14840"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"77.6"	""	"88.6"	""	"76.3"	""	"100.3"	"2.5"	"100.3"	"82.4"	""	"883"	"38"	"36.000"	"29.000"	"0.00719334198410436"	"20"	"0"	"0.002722"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DASPGSPLEK"	"[K].dASPGSPLEk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P22791"	"Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcs2 PE=1 SV=1"	"P22791"	"Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcs2 PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"729.91382"	"1458.82036"	"1458.82043"	"-0.05"	"-0.00003"	"8/88"	"8"	"88"	"581184.596923828"	"HCD"	"MS2"	"17.20647"	"46.8"	"100.000"	"48.4643"	"14712"	"14712"	"14690"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.9"	""	"78.7"	""	"66.0"	""	"91.6"	""	"75.3"	"72.3"	""	"859"	"51"	"36.000"	"29.000"	"0.00032207956290829"	"22"	"0"	"0.0006524"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DASPGSPLEK"	"[K].dASPGSPLEk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P22791"	"Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcs2 PE=1 SV=1"	"P22791"	"Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcs2 PE=1 SV=1"	"0"	"3"	"3"	"0.4706"	"0.0000"	"1"	"1"	"1"	"486.94516"	"1458.82093"	"1458.82043"	"0.34"	"0.00017"	"8/88"	"8"	"88"	"1569662.56567383"	"HCD"	"MS2"	"22.7706"	"61.4"	"100.000"	"48.9420"	"14894"	"14894"	"14872"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"72.7"	""	"94.2"	""	"71.9"	""	"100.9"	"3.4"	"120.8"	"119.2"	""	"857"	"17"	"36.000"	"29.000"	"0.926724887417028"	"22"	"0.00736"	"0.0875"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESIIDVEGIVR"	"[K].eSIIDVEGIVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"729.92212"	"1458.83696"	"1458.83652"	"0.30"	"0.00022"	"4/92"	"4"	"92"	"69856.5243530273"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"97.5345"	"34184"	"34184"	"34178"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.2"	""	"4.7"	""	"3.9"	""	"6.7"	""	"5.8"	"9.9"	""	"864"	"13"	"36.000"	"29.000"	"2.42931452482231"	"13"	"0.008777"	"0.1132"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESIIDVEGIVR"	"[K].eSIIDVEGIVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"729.92242"	"1458.83757"	"1458.83652"	"0.72"	"0.00052"	"6/92"	"6"	"92"	"146286.487426758"	"HCD"	"MS2"	"0"	"4.7"	"100.000"	"97.2194"	"34102"	"34102"	"34093"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.2"	""	"7.7"	""	"9.3"	""	"5.1"	""	"8.7"	"9.0"	""	"878"	"17"	"36.000"	"29.000"	"0.830738848585143"	"21"	"0.005617"	"0.06309"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ESIIDVEGIVR"	"[K].eSIIDVEGIVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"729.92255"	"1458.83782"	"1458.83652"	"0.89"	"0.00065"	"5/92"	"5"	"92"	"94192.5927734375"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"97.4723"	"34184"	"34184"	"34181"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.7"	""	"5.3"	""	"8.7"	""	"8.0"	""	"7.0"	"7.0"	""	"877"	"15"	"36.000"	"29.000"	"1.25883728521783"	"13"	"0.008052"	"0.09951"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIDNPTVDDR"	"[R].wIDNPTVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5085"	"0.0000"	"1"	"1"	"1"	"730.37177"	"1459.73625"	"1459.73787"	"-1.11"	"-0.00081"	"8/96"	"8"	"96"	"586111.785949707"	"HCD"	"MS2"	"21.05472"	"36.0"	"100.000"	"68.6093"	"22876"	"22876"	"22847"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.6"	""	"39.1"	""	"47.2"	""	"65.6"	"0.3"	"64.5"	"64.5"	""	"622"	"59"	"34.000"	"27.000"	"3.93333004063528E-05"	""	"0"	"5.792E-05"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIDNPTVDDR"	"[R].wIDNPTVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"730.37219"	"1459.73711"	"1459.73787"	"-0.52"	"-0.00038"	"5/96"	"5"	"96"	"427793.879150391"	"HCD"	"MS2"	"24.80161"	"26.0"	"100.000"	"69.7332"	"23320"	"23320"	"23298"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.3"	""	"31.1"	""	"34.7"	""	"34.6"	""	"51.5"	"57.7"	""	"617"	"22"	"34.000"	"27.000"	"0.198726218411432"	"26"	"0.001211"	"0.01508"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIDNPTVDDR"	"[R].wIDNPTVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4082"	"0.0000"	"1"	"1"	"1"	"730.37219"	"1459.73711"	"1459.73787"	"-0.52"	"-0.00038"	"15/96"	"15"	"96"	"15058190.5415039"	"HCD"	"MS2"	"0.1177098"	"456.6"	"71.266"	"68.8932"	"22992"	"22992"	"22975"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"781.5"	""	"524.0"	""	"550.0"	""	"760.1"	"1.0"	"814.4"	"893.6"	""	"617"	"49"	"34.000"	"27.000"	"0.000364968319941213"	""	"0"	"0.0001096"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIDNPTVDDR"	"[R].wIDNPTVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4082"	"0.0000"	"1"	"1"	"1"	"730.37231"	"1459.73735"	"1459.73787"	"-0.36"	"-0.00026"	"15/96"	"15"	"96"	"5706165.16473389"	"HCD"	"MS2"	"0"	"262.3"	"100.000"	"69.1994"	"23117"	"23117"	"23102"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"422.8"	""	"299.8"	""	"318.7"	""	"426.8"	""	"477.0"	"543.7"	""	"632"	"49"	"34.000"	"28.000"	"0.00037730024101071"	""	"0"	"4.332E-05"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIDNPTVDDR"	"[R].wIDNPTVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4082"	"0.0000"	"1"	"1"	"1"	"730.37238"	"1459.73747"	"1459.73787"	"-0.27"	"-0.00020"	"15/96"	"15"	"96"	"3248539.9342041"	"HCD"	"MS2"	"0"	"148.4"	"100.000"	"69.4129"	"23189"	"23189"	"23171"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"251.0"	""	"153.3"	""	"178.4"	""	"247.0"	""	"281.2"	"301.4"	""	"629"	"49"	"34.000"	"27.000"	"0.000378983803246931"	""	"0"	"7.445E-05"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIDNPTVDDR"	"[R].wIDNPTVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.3590"	"0.0000"	"1"	"1"	"1"	"730.37244"	"1459.73760"	"1459.73787"	"-0.19"	"-0.00014"	"14/96"	"14"	"96"	"1048872.66656494"	"HCD"	"MS2"	"11.1318"	"52.4"	"100.000"	"68.8022"	"22940"	"22940"	"22917"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"92.7"	""	"62.6"	""	"62.5"	""	"81.3"	""	"99.4"	"98.5"	""	"629"	"39"	"34.000"	"27.000"	"0.00405154484007491"	""	"0"	"0.0005614"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIDNPTVDDR"	"[R].wIDNPTVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6047"	"0.0000"	"1"	"1"	"1"	"730.37292"	"1459.73857"	"1459.73787"	"0.48"	"0.00035"	"6/96"	"6"	"96"	"536565.63067627"	"HCD"	"MS2"	"9.593629"	"32.2"	"100.000"	"69.5034"	"23240"	"23240"	"23224"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.0"	""	"34.5"	""	"47.9"	""	"49.9"	""	"53.3"	"64.6"	""	"632"	"43"	"34.000"	"28.000"	"0.0015584292204976"	""	"0"	"0.0006742"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIDNPTVDDR"	"[R].wIDNPTVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"730.37305"	"1459.73882"	"1459.73787"	"0.65"	"0.00047"	"15/96"	"15"	"96"	"16535172.1364746"	"HCD"	"MS2"	"0"	"426.4"	"64.103"	"69.0951"	"23060"	"23060"	"23044"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"717.2"	""	"478.8"	""	"508.3"	""	"698.5"	""	"799.5"	"839.0"	""	"630"	"48"	"34.000"	"27.000"	"0.0004923915074319"	""	"0"	"5.671E-05"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKQEEVNAAWQR"	"[K].TKQEEVNAAWQR.[L]"	""	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"2"	"2"	"0.2549"	"0.0000"	"1"	"1"	"1"	"730.37830"	"1459.74932"	"1459.72882"	"14.04"	"0.01025"	"8/116"	"8"	"116"	"344093.935974121"	"HCD"	"MS2"	"0"	"25.2"	"100.000"	"46.2554"	"13801"	"13801"	"13773"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.7"	""	"29.5"	""	"30.1"	""	"36.9"	""	"52.9"	"62.7"	"NoQuanLabels"	"672"	"51"	"35.000"	"28.000"	"0.00026936382929826"	"25"	"0.00447"	"0.04889"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQGIEEALK"	"[K].nQGIEEALk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.4872"	"0.0000"	"1"	"1"	"1"	"487.28812"	"1459.84980"	"1459.85206"	"-1.55"	"-0.00076"	"7/82"	"7"	"82"	"6350662.98431396"	"HCD"	"MS2"	"34.86047"	"192.2"	"100.000"	"59.6656"	"19263"	"19263"	"19238"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"302.8"	""	"228.3"	""	"245.9"	""	"335.5"	""	"352.9"	"358.7"	""	"896"	"39"	"36.000"	"29.000"	"0.00601558702589763"	""	"0"	"0.001637"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQGIEEALK"	"[K].nQGIEEALk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.4324"	"0.0000"	"1"	"1"	"1"	"487.28830"	"1459.85035"	"1459.85206"	"-1.18"	"-0.00057"	"7/82"	"7"	"82"	"7536374.50830078"	"HCD"	"MS2"	"47.64801"	"223.6"	"100.000"	"59.4586"	"19193"	"19193"	"19174"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"345.7"	""	"288.8"	""	"280.5"	""	"384.1"	""	"402.7"	"419.7"	""	"908"	"37"	"36.000"	"29.000"	"0.00853209834828685"	""	"0"	"0.0009394"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAEVEGLGK"	"[K].aQAEVEGLGk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"487.28851"	"1459.85099"	"1459.85206"	"-0.74"	"-0.00036"	"7/92"	"7"	"92"	"983477.945556641"	"HCD"	"MS2"	"42.06195"	"45.1"	"100.000"	"56.3033"	"17892"	"17892"	"17867"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.7"	""	"57.2"	""	"60.3"	""	"77.7"	""	"82.6"	"86.1"	""	"908"	"25"	"36.000"	"29.000"	"0.160345159085549"	"19"	"0"	"0.002773"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAEVEGLGK"	"[K].aQAEVEGLGk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"487.28851"	"1459.85099"	"1459.85206"	"-0.74"	"-0.00036"	"7/92"	"7"	"92"	"1257957.46313477"	"HCD"	"MS2"	"31.77994"	"55.4"	"100.000"	"56.0869"	"17818"	"17818"	"17789"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"83.6"	"2.6"	"67.7"	""	"81.8"	""	"83.8"	""	"101.9"	"107.9"	""	"908"	"25"	"36.000"	"29.000"	"0.1429077734602"	"19"	"0"	"0.001462"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAEVEGLGK"	"[K].aQAEVEGLGk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"730.42920"	"1459.85112"	"1459.85206"	"-0.65"	"-0.00047"	"15/92"	"15"	"92"	"723613.791503906"	"HCD"	"MS2"	"0"	"57.4"	"100.000"	"56.1099"	"17813"	"17813"	"17789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"93.2"	""	"77.7"	""	"91.9"	""	"73.3"	"1.0"	"99.1"	"107.1"	""	"881"	"58"	"36.000"	"29.000"	"7.83332080122146E-05"	""	"0"	"2.745E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAEVEGLGK"	"[K].aQAEVEGLGk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"730.42963"	"1459.85198"	"1459.85206"	"-0.06"	"-0.00004"	"15/92"	"15"	"92"	"688528.246337891"	"HCD"	"MS2"	"0"	"56.0"	"100.000"	"55.9557"	"17764"	"17764"	"17745"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"96.6"	""	"79.7"	""	"92.8"	""	"59.9"	""	"91.5"	"113.1"	""	"874"	"56"	"36.000"	"29.000"	"0.000119531243339603"	""	"0"	"1.038E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQGIEEALK"	"[K].nQGIEEALk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"730.43005"	"1459.85283"	"1459.85206"	"0.52"	"0.00038"	"8/82"	"8"	"82"	"6459216.41870117"	"HCD"	"MS2"	"13.19285"	"481.7"	"100.000"	"59.6219"	"19245"	"19245"	"19222"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"725.9"	""	"589.3"	""	"588.5"	""	"834.4"	""	"904.7"	"934.0"	""	"873"	"55"	"36.000"	"29.000"	"0.000148588174804487"	""	"0"	"0.0004821"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQGIEEALK"	"[K].nQGIEEALk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"730.43018"	"1459.85307"	"1459.85206"	"0.69"	"0.00051"	"8/82"	"8"	"82"	"4539830.75854492"	"HCD"	"MS2"	"12.29509"	"363.8"	"100.000"	"59.3620"	"19154"	"19154"	"19126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"572.9"	""	"457.8"	""	"438.0"	""	"620.9"	""	"672.8"	"687.8"	""	"873"	"54"	"36.000"	"29.000"	"0.000155590919740556"	""	"0"	"0.0003407"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFDPIIQDR"	"[K].dLFDPIIQDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"730.90039"	"1460.79350"	"1460.79466"	"-0.79"	"-0.00058"	"6/92"	"6"	"92"	"384043.349182129"	"HCD"	"MS2"	"45.6974"	"18.5"	"100.000"	"101.6952"	"35527"	"35527"	"35523"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.3"	""	"6.6"	""	"14.7"	""	"13.6"	"0.5"	"14.2"	"92.7"	""	"1011"	"25"	"37.000"	"30.000"	"0.16623449940781"	"18"	"0.0002479"	"0.006051"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFDPIIQDR"	"[K].dLFDPIIQDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"730.90057"	"1460.79387"	"1460.79466"	"-0.54"	"-0.00039"	"7/92"	"7"	"92"	"1399219.1027832"	"HCD"	"MS2"	"12.58246"	"61.5"	"100.000"	"101.9518"	"35610"	"35610"	"35605"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"106.1"	""	"25.7"	""	"25.6"	""	"21.4"	""	"27.6"	"381.5"	""	"1008"	"41"	"37.000"	"30.000"	"0.00398502028511911"	"23"	"0"	"0.0001532"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFDPIIQDR"	"[K].dLFDPIIQDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"730.90094"	"1460.79460"	"1460.79466"	"-0.04"	"-0.00003"	"6/92"	"6"	"92"	"397314.584838867"	"HCD"	"MS2"	"36.19325"	"18.4"	"100.000"	"101.6469"	"35558"	"35558"	"35551"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.1"	""	"12.2"	""	"11.5"	""	"11.4"	"0.8"	"10.0"	"90.8"	""	"1010"	"25"	"37.000"	"30.000"	"0.169547495192692"	"18"	"0"	"0.003483"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFDPIIQDR"	"[K].dLFDPIIQDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"730.90106"	"1460.79485"	"1460.79466"	"0.13"	"0.00009"	"6/92"	"6"	"92"	"291198.408569336"	"HCD"	"MS2"	"14.70576"	"14.9"	"100.000"	"102.2089"	"35680"	"35680"	"35677"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.1"	""	"9.3"	""	"11.3"	""	"11.4"	""	"6.7"	"79.6"	""	"989"	"31"	"36.000"	"29.000"	"0.0350886206257896"	"20"	"0.0002479"	"0.005649"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFDPIIQDR"	"[K].dLFDPIIQDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"730.90125"	"1460.79521"	"1460.79466"	"0.38"	"0.00028"	"6/92"	"6"	"92"	"311366.635803223"	"HCD"	"MS2"	"15.35643"	"15.2"	"100.000"	"102.1539"	"35722"	"35722"	"35717"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.0"	""	"8.3"	""	"7.4"	""	"9.8"	""	"9.6"	"85.1"	""	"983"	"31"	"36.000"	"29.000"	"0.0376290732296883"	"18"	"0"	"0.002716"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFDPIIQDR"	"[K].dLFDPIIQDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"730.90125"	"1460.79521"	"1460.79466"	"0.38"	"0.00028"	"8/92"	"8"	"92"	"1461188.49542236"	"HCD"	"MS2"	"12.68411"	"64.2"	"100.000"	"101.8988"	"35640"	"35640"	"35637"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"110.6"	""	"26.5"	""	"32.9"	""	"27.5"	""	"27.5"	"388.3"	""	"983"	"40"	"36.000"	"29.000"	"0.00441086252497119"	"21"	"0"	"0.0002747"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAEQVAELK"	"[R].dAEQVAELk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.6852"	"0.0000"	"1"	"1"	"1"	"730.91974"	"1460.83220"	"1460.83608"	"-2.66"	"-0.00194"	"8/86"	"8"	"86"	"443337.347900391"	"HCD"	"MS2"	"0"	"37.7"	"100.000"	"60.4495"	"19564"	"19564"	"19551"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.2"	""	"33.5"	""	"41.3"	""	"73.4"	""	"71.8"	"81.4"	""	"956"	"54"	"36.000"	"29.000"	"0.000192056007585793"	""	"0"	"0.0001138"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAEQVAELK"	"[R].dAEQVAELk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.4074"	"0.0000"	"1"	"1"	"1"	"730.92047"	"1460.83367"	"1460.83608"	"-1.65"	"-0.00121"	"14/86"	"14"	"86"	"339936.69909668"	"HCD"	"MS2"	"13.8288"	"35.1"	"100.000"	"61.1076"	"19831"	"19831"	"19810"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.4"	""	"41.4"	""	"41.1"	""	"57.7"	"0.6"	"75.3"	"69.1"	""	"962"	"27"	"36.000"	"29.000"	"0.0957513876052837"	""	"0.0006732"	"0.008217"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAEQVAELK"	"[R].dAEQVAELk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.5098"	"0.0000"	"1"	"1"	"1"	"730.92096"	"1460.83464"	"1460.83608"	"-0.98"	"-0.00072"	"8/86"	"8"	"86"	"537760.994628906"	"HCD"	"MS2"	"0"	"45.9"	"100.000"	"60.6907"	"19646"	"19646"	"19630"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.8"	""	"42.3"	""	"51.6"	""	"87.5"	""	"97.1"	"96.3"	""	"963"	"51"	"36.000"	"29.000"	"0.000351233791187575"	""	"0"	"0.0002192"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAEQVAELK"	"[R].dAEQVAELk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.5577"	"0.0000"	"1"	"1"	"1"	"730.92157"	"1460.83586"	"1460.83608"	"-0.15"	"-0.00011"	"14/86"	"14"	"86"	"702276.755126953"	"HCD"	"MS2"	"0"	"61.4"	"100.000"	"60.7783"	"19697"	"19697"	"19673"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"82.5"	""	"50.0"	""	"65.5"	""	"109.2"	"0.8"	"135.1"	"140.8"	""	"940"	"52"	"36.000"	"29.000"	"0.000297918764290756"	""	"0"	"0.0002627"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAEQVAELK"	"[R].dAEQVAELk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.5273"	"0.0000"	"1"	"1"	"1"	"730.92163"	"1460.83599"	"1460.83608"	"-0.06"	"-0.00005"	"8/86"	"8"	"86"	"665227.823791504"	"HCD"	"MS2"	"0"	"60.1"	"100.000"	"61.0057"	"19774"	"19774"	"19750"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.2"	""	"49.7"	""	"66.2"	""	"117.4"	""	"130.4"	"131.8"	""	"924"	"55"	"36.000"	"29.000"	"0.000140165772709775"	""	"0"	"0.0002121"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQGIEEALK"	"[K].nQGIEEALk.[N]"	"N-Term(TMT6plex); N1(Deamidated); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.2449"	"0.0000"	"1"	"1"	"1"	"730.92169"	"1460.83611"	"1460.83608"	"0.02"	"0.00001"	"8/82"	"8"	"82"	"442369.465332031"	"HCD"	"MS2"	"15.97977"	"39.4"	"100.000"	"66.6024"	"22043"	"22043"	"22021"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.8"	""	"48.8"	""	"56.3"	""	"64.9"	""	"71.4"	"69.9"	""	"924"	"49"	"36.000"	"29.000"	"0.00052679540185326"	"24"	"0"	"0.0005133"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQGIEEALK"	"[K].nQGIEEALk.[N]"	"N-Term(TMT6plex); N1(Deamidated); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.2453"	"0.0000"	"1"	"1"	"1"	"730.92175"	"1460.83623"	"1460.83608"	"0.10"	"0.00007"	"8/82"	"8"	"82"	"464456.798400879"	"HCD"	"MS2"	"10.07322"	"39.4"	"100.000"	"66.5158"	"22023"	"22023"	"21997"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.1"	""	"46.9"	""	"53.4"	""	"67.3"	"0.8"	"64.5"	"70.4"	""	"924"	"53"	"36.000"	"29.000"	"0.000238584362603697"	"29"	"0"	"0.0001691"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAASSLQQASLK"	"[R].QAASSLQQASLk.[L]"	"K12(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"730.92206"	"1460.83684"	"1460.82702"	"6.72"	"0.00491"	"6/122"	"6"	"122"	"216664.137329102"	"HCD"	"MS2"	"18.93561"	"16.9"	"100.000"	"66.8313"	"22152"	"22152"	"22125"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.5"	""	"18.1"	"2.3"	"25.5"	""	"28.0"	""	"32.3"	"28.1"	""	"930"	"30"	"36.000"	"29.000"	"0.0437978662383121"	"17"	"0.002973"	"0.02823"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAASSLQQASLK"	"[R].QAASSLQQASLk.[L]"	"K12(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"730.92316"	"1460.83904"	"1460.82702"	"8.22"	"0.00601"	"7/122"	"7"	"122"	"163759.261047363"	"HCD"	"MS2"	"29.75671"	"12.5"	"100.000"	"67.0054"	"22208"	"22208"	"22179"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.0"	""	"15.1"	""	"15.9"	""	"18.9"	""	"27.6"	"23.1"	""	"925"	"33"	"36.000"	"29.000"	"0.0214838314790522"	"16"	"0.007413"	"0.08902"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLFDPIIEDR"	"[K].dLFDPIIEDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"731.39288"	"1461.77849"	"1461.77868"	"-0.13"	"-0.00009"	"9/88"	"9"	"88"	"216427.595947266"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"104.7489"	"36400"	"36400"	"36392"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.8"	""	"8.9"	""	"5.6"	""	"18.9"	""	"15.3"	"18.5"	""	"910"	"52"	"36.000"	"29.000"	"0.00025942474388774"	""	"0"	"0.001346"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLFDPIIQDR"	"[K].dLFDPIIqDR.[H]"	"N-Term(TMT6plex); Q8(Deamidated)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"731.39288"	"1461.77849"	"1461.77868"	"-0.13"	"-0.00009"	"9/92"	"9"	"92"	"216427.595947266"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"104.7489"	"36400"	"36400"	"36392"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.8"	""	"8.9"	""	"5.6"	""	"18.9"	""	"15.3"	"18.5"	""	"910"	"52"	"36.000"	"29.000"	"0.00025942474388774"	""	"0"	"0.001346"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLFDPIIEDR"	"[K].dLFDPIIEDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"731.39288"	"1461.77849"	"1461.77868"	"-0.13"	"-0.00009"	"9/88"	"9"	"88"	"646605.660644531"	"HCD"	"MS2"	"0"	"29.2"	"100.000"	"105.2572"	"36568"	"36568"	"36564"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.5"	""	"26.2"	""	"33.9"	""	"53.7"	"1.3"	"66.4"	"58.0"	""	"910"	"56"	"36.000"	"29.000"	"0.000125317406001887"	""	"0"	"3.16E-05"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLFDPIIQDR"	"[K].dLFDPIIqDR.[H]"	"N-Term(TMT6plex); Q8(Deamidated)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"731.39288"	"1461.77849"	"1461.77868"	"-0.13"	"-0.00009"	"9/92"	"9"	"92"	"646605.660644531"	"HCD"	"MS2"	"0"	"29.2"	"100.000"	"105.2572"	"36568"	"36568"	"36564"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.5"	""	"26.2"	""	"33.9"	""	"53.7"	"1.3"	"66.4"	"58.0"	""	"910"	"56"	"36.000"	"29.000"	"0.000125317406001887"	""	"0"	"3.16E-05"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLFDPIIEDR"	"[K].dLFDPIIEDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"731.39301"	"1461.77873"	"1461.77868"	"0.04"	"0.00003"	"10/88"	"10"	"88"	"4801374.62567139"	"HCD"	"MS2"	"0"	"190.0"	"100.000"	"105.0063"	"36482"	"36482"	"36475"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"228.5"	""	"165.1"	""	"211.1"	""	"343.0"	"1.7"	"450.5"	"408.2"	""	"888"	"53"	"36.000"	"29.000"	"0.000208632984220715"	""	"0"	"6.42E-05"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLFDPIIQDR"	"[K].dLFDPIIqDR.[H]"	"N-Term(TMT6plex); Q8(Deamidated)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"731.39301"	"1461.77873"	"1461.77868"	"0.04"	"0.00003"	"10/92"	"10"	"92"	"4801374.62567139"	"HCD"	"MS2"	"0"	"190.0"	"100.000"	"105.0063"	"36482"	"36482"	"36475"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"228.5"	""	"165.1"	""	"211.1"	""	"343.0"	"1.7"	"450.5"	"408.2"	""	"888"	"53"	"36.000"	"29.000"	"0.000208632984220715"	""	"0"	"6.42E-05"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLFDPIIEDR"	"[K].dLFDPIIEDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"731.39313"	"1461.77898"	"1461.77868"	"0.21"	"0.00015"	"10/88"	"10"	"88"	"5412961.66027832"	"HCD"	"MS2"	"0"	"200.8"	"100.000"	"104.9638"	"36537"	"36537"	"36531"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"253.7"	""	"182.4"	""	"217.5"	""	"379.1"	""	"453.1"	"425.0"	""	"882"	"57"	"36.000"	"29.000"	"8.94208079308886E-05"	""	"0"	"1.885E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLFDPIIQDR"	"[K].dLFDPIIqDR.[H]"	"N-Term(TMT6plex); Q8(Deamidated)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"731.39313"	"1461.77898"	"1461.77868"	"0.21"	"0.00015"	"10/92"	"10"	"92"	"5412961.66027832"	"HCD"	"MS2"	"0"	"200.8"	"100.000"	"104.9638"	"36537"	"36537"	"36531"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"253.7"	""	"182.4"	""	"217.5"	""	"379.1"	""	"453.1"	"425.0"	""	"882"	"57"	"36.000"	"29.000"	"8.94208079308886E-05"	""	"0"	"1.885E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLFDPIIEDR"	"[K].dLFDPIIEDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"731.39349"	"1461.77971"	"1461.77868"	"0.71"	"0.00052"	"6/88"	"6"	"88"	"132737.085083008"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"104.7056"	"36450"	"36450"	"36442"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.0"	""	"5.8"	""	"10.4"	""	"13.3"	""	"19.3"	"15.0"	""	"881"	"23"	"36.000"	"29.000"	"0.244875825327613"	"29"	"0.006685"	"0.07523"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLFDPIIQDR"	"[K].dLFDPIIqDR.[H]"	"N-Term(TMT6plex); Q8(Deamidated)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"731.39349"	"1461.77971"	"1461.77868"	"0.71"	"0.00052"	"6/92"	"6"	"92"	"132737.085083008"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"104.7056"	"36450"	"36450"	"36442"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.0"	""	"5.8"	""	"10.4"	""	"13.3"	""	"19.3"	"15.0"	""	"881"	"23"	"36.000"	"29.000"	"0.244875825327613"	"29"	"0.006685"	"0.07523"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLFDPIIEDR"	"[K].dLFDPIIEDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"731.39362"	"1461.77995"	"1461.77868"	"0.88"	"0.00064"	"5/88"	"5"	"88"	"103982.426452637"	"HCD"	"MS2"	"100"	"4.5"	"100.000"	"105.5401"	"36667"	"36667"	"36658"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.0"	""	"6.5"	""	"4.9"	""	"7.6"	""	"10.3"	"8.1"	""	"879"	"6"	"36.000"	"29.000"	"12.2450025361278"	"14"	"0.009916"	"0.128"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLFDPIIQDR"	"[K].dLFDPIIqDR.[H]"	"N-Term(TMT6plex); Q8(Deamidated)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"731.39362"	"1461.77995"	"1461.77868"	"0.87"	"0.00064"	"5/92"	"5"	"92"	"103982.426452637"	"HCD"	"MS2"	"100"	"4.5"	"100.000"	"105.5401"	"36667"	"36667"	"36658"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.0"	""	"6.5"	""	"4.9"	""	"7.6"	""	"10.3"	"8.1"	""	"879"	"6"	"36.000"	"29.000"	"12.2450025361278"	"14"	"0.009916"	"0.128"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLFDPIIEDR"	"[K].dLFDPIIEDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"731.39362"	"1461.77995"	"1461.77868"	"0.88"	"0.00064"	"10/88"	"10"	"88"	"795941.575317383"	"HCD"	"MS2"	"0"	"37.0"	"100.000"	"105.2221"	"36624"	"36624"	"36621"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.6"	""	"32.7"	""	"40.6"	""	"65.6"	"0.1"	"90.5"	"79.4"	""	"879"	"57"	"36.000"	"29.000"	"8.97343826682258E-05"	""	"0"	"0.0001139"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLFDPIIQDR"	"[K].dLFDPIIqDR.[H]"	"N-Term(TMT6plex); Q8(Deamidated)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"731.39362"	"1461.77995"	"1461.77868"	"0.87"	"0.00064"	"10/92"	"10"	"92"	"795941.575317383"	"HCD"	"MS2"	"0"	"37.0"	"100.000"	"105.2221"	"36624"	"36624"	"36621"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.6"	""	"32.7"	""	"40.6"	""	"65.6"	"0.1"	"90.5"	"79.4"	""	"879"	"57"	"36.000"	"29.000"	"8.97343826682258E-05"	""	"0"	"0.0001139"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STESLQANVQR"	"[K].sTESLQANVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"731.39636"	"1461.78545"	"1461.78589"	"-0.30"	"-0.00022"	"9/96"	"9"	"96"	"787165.480041504"	"HCD"	"MS2"	"0"	"44.7"	"100.000"	"35.7150"	"9530"	"9530"	"9507"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.0"	""	"54.6"	""	"64.6"	""	"77.7"	"1.4"	"82.8"	"77.4"	""	"957"	"72"	"36.000"	"29.000"	"2.88989419156598E-06"	""	"0"	"2.754E-06"	"1.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEAWVLETAGR"	"[R].tEAWVLETAGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYR8"	"Secernin-2 OS=Rattus norvegicus OX=10116 GN=Scrn2 PE=2 SV=1"	"Q6AYR8"	"Secernin-2 OS=Rattus norvegicus OX=10116 GN=Scrn2 PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"731.39740"	"1461.78752"	"1461.78991"	"-1.63"	"-0.00119"	"8/94"	"8"	"94"	"190083.337158203"	"HCD"	"MS2"	"26.84835"	"12.6"	"100.000"	"80.2245"	"27574"	"27574"	"27550"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.9"	""	"16.7"	""	"14.8"	""	"20.6"	""	"22.6"	"22.2"	""	"1006"	"24"	"37.000"	"30.000"	"0.196592970583578"	"18"	"0.001374"	"0.01784"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STESLQANVQR"	"[K].sTESLQANVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"2"	"2"	"0.7910"	"0.0000"	"1"	"1"	"1"	"731.39764"	"1461.78801"	"1461.78589"	"1.45"	"0.00106"	"9/96"	"9"	"96"	"661563.617858887"	"HCD"	"MS2"	"0"	"37.5"	"100.000"	"35.8360"	"9575"	"9575"	"9550"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.1"	""	"41.6"	""	"43.7"	""	"72.0"	""	"71.7"	"71.2"	""	"1011"	"67"	"37.000"	"30.000"	"1.02499361471801E-05"	""	"0"	"1.29E-06"	"1.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSESLIVEAEK"	"[R].QSESLIVEAEk.[N]"	"K11(TMT6plex)"	"1"	"1"	"Q7TSN4"	"Phosphatidylinositol-glycan biosynthesis class W protein OS=Rattus norvegicus OX=10116 GN=Pigw PE=1 SV=1"	"Q7TSN4"	"Phosphatidylinositol-glycan biosynthesis class W protein OS=Rattus norvegicus OX=10116 GN=Pigw PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"731.39923"	"1461.79119"	"1461.79980"	"-5.90"	"-0.00431"	"5/116"	"5"	"116"	"135944.342041016"	"HCD"	"MS2"	"100"	"8.4"	"100.000"	"80.0371"	"27495"	"27495"	"27473"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.1"	""	"8.1"	""	"14.8"	""	"14.1"	""	"12.4"	"17.7"	""	"1026"	"27"	"37.000"	"30.000"	"0.114055797390417"	"29"	"0.006308"	"0.07139"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSQEEILGSTR"	"[R].lSQEEILGSTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQM2"	"Kinesin light chain 4 OS=Rattus norvegicus OX=10116 GN=Klc4 PE=1 SV=1"	"Q5PQM2"	"Kinesin light chain 4 OS=Rattus norvegicus OX=10116 GN=Klc4 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"731.40833"	"1461.80937"	"1461.81104"	"-1.14"	"-0.00083"	"4/112"	"4"	"112"	"435831.348815918"	"HCD"	"MS2"	"27.85579"	"37.2"	"100.000"	"66.3266"	"21946"	"21946"	"21917"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.9"	""	"50.5"	""	"51.1"	""	"67.3"	""	"74.5"	"66.2"	""	"1098"	"17"	"37.000"	"30.000"	"1.13650760048628"	"17"	"0.0003538"	"0.007311"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSQEEILGSTR"	"[R].lSQEEILGSTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQM2"	"Kinesin light chain 4 OS=Rattus norvegicus OX=10116 GN=Klc4 PE=1 SV=1"	"Q5PQM2"	"Kinesin light chain 4 OS=Rattus norvegicus OX=10116 GN=Klc4 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"731.40912"	"1461.81096"	"1461.81104"	"-0.05"	"-0.00004"	"7/112"	"7"	"112"	"407658.43536377"	"HCD"	"MS2"	"52.91137"	"36.2"	"100.000"	"66.4134"	"21966"	"21966"	"21941"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.9"	""	"48.0"	""	"44.6"	""	"65.3"	""	"73.1"	"63.4"	""	"1083"	"24"	"37.000"	"30.000"	"0.208256449977559"	"18"	"0"	"0.003179"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEGIDELAK"	"[R].eEGIDELAk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5M819"	"Phosphoserine phosphatase OS=Rattus norvegicus OX=10116 GN=Psph PE=2 SV=1"	"Q5M819"	"Phosphoserine phosphatase OS=Rattus norvegicus OX=10116 GN=Psph PE=2 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"731.41400"	"1461.82073"	"1461.82010"	"0.43"	"0.00032"	"11/74"	"11"	"74"	"307321.890197754"	"HCD"	"MS2"	"46.91152"	"36.8"	"100.000"	"65.3053"	"21530"	"21530"	"21501"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.5"	""	"40.6"	""	"38.8"	""	"54.9"	"1.5"	"81.2"	"85.4"	""	"1056"	"29"	"37.000"	"30.000"	"0.0657103715015291"	"18"	"0.0003538"	"0.006858"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEEVTVEK"	"[K].aVEEVTVEk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"731.43195"	"1461.85661"	"1461.85648"	"0.09"	"0.00007"	"8/74"	"8"	"74"	"559682.524230957"	"HCD"	"MS2"	"17.88958"	"46.7"	"100.000"	"57.7594"	"18499"	"18499"	"18479"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.4"	""	"63.2"	""	"60.7"	""	"82.4"	""	"81.3"	"103.2"	""	"927"	"58"	"36.000"	"29.000"	"7.46534251905129E-05"	"28"	"0"	"0.0001012"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEEVTVEK"	"[K].aVEEVTVEk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"731.43213"	"1461.85698"	"1461.85648"	"0.34"	"0.00025"	"8/74"	"8"	"74"	"432103.603759766"	"HCD"	"MS2"	"12.18234"	"34.0"	"100.000"	"58.0007"	"18583"	"18583"	"18559"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.9"	""	"43.1"	""	"49.8"	""	"57.7"	"0.5"	"66.6"	"67.5"	""	"913"	"58"	"36.000"	"29.000"	"6.84606127406833E-05"	"26"	"0"	"0.0001699"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGNGTVMGAEIR"	"[K].eGNGTVMGAEIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"731.88000"	"1462.75273"	"1462.75214"	"0.40"	"0.00029"	"5/124"	"5"	"124"	"211501.934143066"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"46.9092"	"14066"	"14066"	"14041"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.9"	""	"26.6"	""	"22.7"	""	"29.0"	""	"38.0"	"32.8"	""	"780"	"21"	"35.000"	"28.000"	"0.335787563351994"	"20"	"0.004676"	"0.05022"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGNGTVMGAELR"	"[K].eGNGTVMGAELR.[H]"	"N-Term(TMT6plex)"	"2"	"2"	"P16409"	"Myosin light chain 3 OS=Rattus norvegicus OX=10116 GN=Myl3 PE=1 SV=2"	"P16409; P02600"	"Myosin light chain 3 OS=Rattus norvegicus OX=10116 GN=Myl3 PE=1 SV=2; Myosin light chain 1/3, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Myl1 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"731.88000"	"1462.75273"	"1462.75214"	"0.40"	"0.00029"	"5/124"	"5"	"124"	"211501.934143066"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"46.9092"	"14066"	"14066"	"14041"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.9"	""	"26.6"	""	"22.7"	""	"29.0"	""	"38.0"	"32.8"	""	"780"	"21"	"35.000"	"28.000"	"0.335787563351994"	"20"	"0.004676"	"0.05022"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQVWHEEHR"	"[R].iQVWHEEHR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"366.44836"	"1462.77163"	"1462.77526"	"-2.48"	"-0.00091"	"6/80"	"6"	"80"	"11354644.4990845"	"HCD"	"MS2"	"10.73708"	"169.8"	"100.000"	"34.2565"	"8938"	"8938"	"8919"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"248.3"	""	"233.5"	""	"215.1"	""	"267.7"	"4.3"	"309.7"	"330.4"	""	"886"	"18"	"36.000"	"29.000"	"0.721778142459397"	"14"	"0.003449"	"0.03426"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPSGLDDYPR"	"[K].tLPSGLDDYPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"731.89044"	"1462.77361"	"1462.77392"	"-0.22"	"-0.00016"	"13/94"	"13"	"94"	"445107.561035156"	"HCD"	"MS2"	"8.613784"	"22.4"	"100.000"	"72.4142"	"24426"	"24426"	"24405"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.4"	""	"24.2"	""	"27.9"	""	"38.3"	""	"43.8"	"48.9"	""	"915"	"40"	"36.000"	"29.000"	"0.00507447477982549"	"15"	"0.0006732"	"0.009202"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQVWHEEHR"	"[R].iQVWHEEHR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.8537"	"0.0000"	"1"	"1"	"1"	"488.26273"	"1462.77362"	"1462.77526"	"-1.12"	"-0.00055"	"7/80"	"7"	"80"	"8227428.20117188"	"HCD"	"MS2"	"23.07788"	"205.2"	"100.000"	"34.3409"	"8972"	"8972"	"8951"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"227.4"	""	"198.3"	""	"215.0"	""	"374.0"	"4.0"	"466.7"	"467.0"	""	"915"	"41"	"36.000"	"29.000"	"0.0033604009468188"	"21"	"0"	"0.0002944"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQVWHEEHR"	"[R].iQVWHEEHR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"4"	"4"	"0.9524"	"0.0000"	"1"	"1"	"1"	"366.44888"	"1462.77370"	"1462.77526"	"-1.07"	"-0.00039"	"6/80"	"6"	"80"	"11618533.7872314"	"HCD"	"MS2"	"6.104623"	"93.0"	"47.154"	"34.5401"	"9047"	"9047"	"9028"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"124.7"	""	"123.0"	""	"115.8"	""	"134.5"	"0.6"	"165.9"	"218.3"	""	"915"	"21"	"36.000"	"29.000"	"0.336814747103842"	"14"	"0.0023"	"0.02381"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPSGLDDYPR"	"[K].tLPSGLDDYPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"2"	"2"	"0.9434"	"0.0000"	"1"	"1"	"1"	"731.89050"	"1462.77373"	"1462.77392"	"-0.13"	"-0.00010"	"16/94"	"16"	"94"	"592934.460510254"	"HCD"	"MS2"	"0"	"26.9"	"100.000"	"72.7167"	"24549"	"24549"	"24529"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.1"	""	"30.3"	""	"39.5"	""	"38.7"	"0.9"	"52.4"	"57.7"	""	"915"	"53"	"36.000"	"29.000"	"0.000219984001915751"	"19"	"0"	"0.0006553"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQVWHEEHR"	"[R].iQVWHEEHR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"488.26279"	"1462.77381"	"1462.77526"	"-0.99"	"-0.00048"	"13/80"	"13"	"80"	"7795575.14215088"	"HCD"	"MS2"	"25.75111"	"184.1"	"100.000"	"34.4435"	"9008"	"9008"	"8983"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"190.1"	""	"175.7"	""	"170.2"	""	"334.1"	""	"445.3"	"442.8"	""	"915"	"34"	"36.000"	"29.000"	"0.0198788427558494"	"20"	"0"	"0.0004402"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPSGLDDYPR"	"[K].tLPSGLDDYPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"731.89063"	"1462.77397"	"1462.77392"	"0.03"	"0.00002"	"12/94"	"12"	"94"	"397238.243286133"	"HCD"	"MS2"	"0"	"21.5"	"100.000"	"72.5334"	"24461"	"24461"	"24441"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.7"	""	"30.2"	""	"28.6"	""	"31.7"	"0.9"	"40.4"	"41.5"	""	"915"	"36"	"36.000"	"29.000"	"0.0119781872626019"	"15"	"0.000936"	"0.01233"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPSGLDDYPR"	"[K].tLPSGLDDYPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"731.89081"	"1462.77434"	"1462.77392"	"0.28"	"0.00021"	"9/94"	"9"	"94"	"761777.587585449"	"HCD"	"MS2"	"0"	"35.5"	"100.000"	"72.8192"	"24577"	"24577"	"24562"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.3"	""	"42.5"	""	"50.3"	""	"64.2"	"2.4"	"59.2"	"74.5"	""	"906"	"50"	"36.000"	"29.000"	"0.000475442720179502"	"18"	"0"	"0.0002692"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQVWHEEHR"	"[R].iQVWHEEHR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"366.44907"	"1462.77443"	"1462.77526"	"-0.57"	"-0.00021"	"6/80"	"6"	"80"	"5570849.20294189"	"HCD"	"MS2"	"11.87435"	"111.1"	"100.000"	"34.5686"	"9065"	"9065"	"9047"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"133.5"	""	"122.8"	""	"143.7"	""	"164.3"	"1.2"	"208.4"	"281.5"	""	"906"	"16"	"36.000"	"29.000"	"1.07176162296105"	"14"	"0.003189"	"0.03216"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQGVSTTDLVGR"	"[R].tQGVSTTDLVGR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"O88637"	"Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Pcyt2 PE=1 SV=1"	"O88637"	"Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Pcyt2 PE=1 SV=1"	"0"	"2"	"2"	"0.8305"	"0.0000"	"1"	"1"	"1"	"731.90582"	"1462.80437"	"1462.80629"	"-1.31"	"-0.00096"	"8/122"	"8"	"122"	"260525.862548828"	"HCD"	"MS2"	"0"	"18.0"	"100.000"	"50.8500"	"15673"	"15673"	"15649"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.3"	""	"21.1"	""	"26.6"	""	"32.5"	"1.0"	"29.7"	"26.9"	""	"1010"	"59"	"37.000"	"30.000"	"6.74980735855953E-05"	"26"	"0"	"0.0001741"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"731.90771"	"1462.80815"	"1462.81031"	"-1.47"	"-0.00108"	"5/88"	"5"	"88"	"118358.672119141"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"77.9931"	"26679"	"26679"	"26664"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.7"	""	"13.9"	""	"9.1"	""	"7.3"	""	"10.7"	"8.8"	""	"978"	"33"	"36.000"	"29.000"	"0.0230838827177896"	"23"	"0.0001301"	"0.004724"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"488.27429"	"1462.80832"	"1462.81031"	"-1.36"	"-0.00066"	"8/88"	"8"	"88"	"451304.757507324"	"HCD"	"MS2"	""	"10.0"	"100.000"	"77.6029"	"26524"	"26524"	"26499"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.8"	""	"14.9"	""	"14.8"	""	"15.6"	""	"19.5"	"18.4"	""	"973"	"22"	"36.000"	"29.000"	"0.276110450531258"	"17"	"0.001211"	"0.01562"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQGVSTTDLVGR"	"[R].tQGVSTTDLVGR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"O88637"	"Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Pcyt2 PE=1 SV=1"	"O88637"	"Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Pcyt2 PE=1 SV=1"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"731.90820"	"1462.80913"	"1462.80629"	"1.94"	"0.00142"	"7/122"	"7"	"122"	"225630.779052734"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"50.4282"	"15512"	"15512"	"15490"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.5"	""	"18.4"	""	"29.5"	""	"20.5"	""	"25.9"	"29.2"	""	"986"	"41"	"36.000"	"29.000"	"0.0040723670914155"	"23"	"0"	"0.001389"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8448"	"0.0000"	"1"	"1"	"1"	"731.90845"	"1462.80962"	"1462.81031"	"-0.47"	"-0.00035"	"9/88"	"9"	"88"	"894578.51171875"	"HCD"	"MS2"	"0"	"34.7"	"100.000"	"77.7070"	"26566"	"26566"	"26553"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.8"	""	"62.5"	""	"68.2"	""	"39.3"	""	"53.8"	"57.2"	""	"979"	"58"	"36.000"	"29.000"	"8.56549954081769E-05"	"25"	"0"	"2.572E-06"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"731.90845"	"1462.80962"	"1462.81031"	"-0.47"	"-0.00035"	"9/88"	"9"	"88"	"2033193.73126221"	"HCD"	"MS2"	"0"	"75.6"	"100.000"	"77.4299"	"26453"	"26453"	"26439"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"116.3"	""	"151.0"	""	"142.0"	""	"83.8"	""	"110.1"	"114.7"	""	"979"	"56"	"36.000"	"29.000"	"0.000116346332030288"	"24"	"0"	"9.489E-06"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"731.90863"	"1462.80998"	"1462.81031"	"-0.22"	"-0.00016"	"14/88"	"14"	"88"	"530333.990539551"	"HCD"	"MS2"	"14.74785"	"25.5"	"100.000"	"77.2607"	"26374"	"26374"	"26355"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.4"	""	"50.3"	""	"45.9"	""	"29.6"	""	"30.9"	"38.7"	""	"979"	"57"	"36.000"	"29.000"	"0.000107585240772817"	"23"	"0"	"1.646E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"731.90875"	"1462.81023"	"1462.81031"	"-0.06"	"-0.00004"	"8/88"	"8"	"88"	"399143.51385498"	"HCD"	"MS2"	"14.98463"	"16.9"	"100.000"	"77.1507"	"26340"	"26340"	"26317"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.7"	""	"33.5"	""	"26.1"	""	"20.7"	""	"28.3"	"27.7"	""	"978"	"46"	"36.000"	"29.000"	"0.00131616051912026"	"24"	"0"	"8.924E-05"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"731.90887"	"1462.81047"	"1462.81031"	"0.11"	"0.00008"	"9/88"	"9"	"88"	"679821.163452148"	"HCD"	"MS2"	"0"	"28.8"	"100.000"	"77.8326"	"26606"	"26606"	"26594"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.2"	""	"56.1"	""	"48.0"	""	"24.2"	"0.7"	"45.8"	"51.5"	""	"963"	"49"	"36.000"	"29.000"	"0.000649525627967881"	"27"	"0"	"4.637E-06"	"0.975"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"731.90900"	"1462.81072"	"1462.81031"	"0.28"	"0.00020"	"9/88"	"9"	"88"	"2031690.46777344"	"HCD"	"MS2"	"0"	"75.6"	"100.000"	"77.5538"	"26494"	"26494"	"26477"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"127.1"	""	"145.0"	""	"138.1"	""	"95.7"	"1.1"	"94.1"	"111.4"	""	"959"	"57"	"36.000"	"29.000"	"0.000102279503585378"	"25"	"0"	"7.504E-06"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEAGIAVMK"	"[K].eGEAGIAVMk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"488.28220"	"1462.83203"	"1462.83397"	"-1.32"	"-0.00065"	"6/76"	"6"	"76"	"1631550.32373047"	"HCD"	"MS2"	"27.99485"	"83.0"	"100.000"	"63.0334"	"20610"	"20610"	"20589"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"120.9"	""	"106.3"	""	"126.5"	""	"130.4"	""	"153.5"	"154.0"	""	"926"	"20"	"36.000"	"29.000"	"0.437100185720382"	"20"	"0.000936"	"0.01297"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEAGIAVMK"	"[K].eGEAGIAVMk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"731.92010"	"1462.83293"	"1462.83397"	"-0.71"	"-0.00052"	"8/76"	"8"	"76"	"831210.553039551"	"HCD"	"MS2"	"0"	"70.7"	"100.000"	"63.0357"	"20611"	"20611"	"20589"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"99.2"	""	"99.4"	""	"105.8"	""	"103.5"	""	"126.9"	"136.3"	""	"934"	"39"	"36.000"	"29.000"	"0.00644639451569547"	"18"	"0"	"0.001378"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEAGIAVMK"	"[K].eGEAGIAVMk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"3"	"3"	"0.6957"	"0.0000"	"1"	"1"	"1"	"488.28268"	"1462.83350"	"1462.83397"	"-0.32"	"-0.00016"	"11/76"	"11"	"76"	"1287319.73730469"	"HCD"	"MS2"	"46.63468"	"59.0"	"100.000"	"63.0925"	"20619"	"20619"	"20598"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"92.0"	""	"81.5"	""	"72.8"	""	"96.7"	"0.8"	"106.2"	"108.3"	""	"915"	"23"	"36.000"	"29.000"	"0.256679449034855"	"21"	"0"	"0.003034"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEAGIAVMK"	"[K].eGEAGIAVMk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"731.92072"	"1462.83415"	"1462.83397"	"0.12"	"0.00009"	"8/76"	"8"	"76"	"689518.956848145"	"HCD"	"MS2"	"22.37014"	"59.2"	"100.000"	"63.0971"	"20621"	"20621"	"20598"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.6"	""	"87.4"	""	"89.0"	""	"90.6"	""	"101.9"	"109.0"	""	"996"	"20"	"36.000"	"29.000"	"0.548566576151625"	"14"	"0"	"0.001206"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQDHIIIIPR"	"[K].eQDHIIIIPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"488.29004"	"1462.85556"	"1462.85793"	"-1.62"	"-0.00079"	"7/92"	"7"	"92"	"1007306.23162842"	"HCD"	"MS2"	"11.63064"	"24.8"	"100.000"	"58.0011"	"18598"	"18598"	"18575"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.7"	""	"36.0"	""	"34.9"	""	"39.3"	""	"41.8"	"46.8"	""	"885"	"23"	"36.000"	"29.000"	"0.220756385701055"	"16"	"0.0003538"	"0.006898"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQDHIIIIPR"	"[K].eQDHIIIIPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"488.29117"	"1462.85895"	"1462.85793"	"0.70"	"0.00034"	"10/92"	"10"	"92"	"1108256.41241455"	"HCD"	"MS2"	"18.31778"	"23.9"	"100.000"	"58.1619"	"18649"	"18649"	"18623"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.3"	""	"33.6"	""	"33.1"	""	"39.8"	""	"41.3"	"44.7"	""	"855"	"21"	"36.000"	"29.000"	"0.305447179397282"	"17"	"0.0002479"	"0.005122"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IETIEVMEDR"	"[K].iETIEVMEDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.8833"	"0.0000"	"1"	"1"	"1"	"732.38385"	"1463.76042"	"1463.76131"	"-0.61"	"-0.00044"	"16/86"	"16"	"86"	"2516994.21636963"	"HCD"	"MS2"	"0"	"115.7"	"100.000"	"83.4411"	"28854"	"28854"	"28848"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"194.2"	""	"103.9"	""	"79.1"	""	"146.1"	""	"278.6"	"302.4"	""	"831"	"60"	"36.000"	"29.000"	"3.89557013877703E-05"	"24"	"0"	"1.86E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IETIEVMEDR"	"[K].iETIEVMEDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"732.38422"	"1463.76116"	"1463.76131"	"-0.11"	"-0.00008"	"7/86"	"7"	"86"	"478292.859130859"	"HCD"	"MS2"	"3.764366"	"26.5"	"100.000"	"83.6986"	"28958"	"28958"	"28947"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.2"	""	"23.8"	""	"22.1"	""	"37.9"	"0.3"	"65.6"	"67.7"	""	"861"	"55"	"36.000"	"29.000"	"0.000138348086188466"	"24"	"0"	"0.0002957"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IETIEVMEDR"	"[K].iETIEVMEDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.9245"	"0.0000"	"1"	"1"	"1"	"732.38434"	"1463.76140"	"1463.76131"	"0.06"	"0.00004"	"15/86"	"15"	"86"	"2501201.26416016"	"HCD"	"MS2"	"0"	"120.8"	"100.000"	"83.4324"	"28853"	"28853"	"28845"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"181.2"	""	"106.0"	""	"88.0"	""	"153.6"	"2.1"	"304.1"	"315.9"	""	"861"	"53"	"36.000"	"29.000"	"0.000224374323130737"	"19"	"0"	"2.545E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IETIEVMEDR"	"[K].iETIEVMEDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"732.38458"	"1463.76189"	"1463.76131"	"0.39"	"0.00029"	"9/86"	"9"	"86"	"351963.234069824"	"HCD"	"MS2"	"9.344388"	"20.0"	"100.000"	"83.7351"	"28969"	"28969"	"28960"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.8"	""	"21.3"	""	"18.9"	""	"28.8"	"1.2"	"44.8"	"49.8"	""	"872"	"43"	"36.000"	"29.000"	"0.0023414586321743"	"26"	"0"	"0.001363"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IETIEVMEDR"	"[K].iETIEVMEDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.8431"	"0.0000"	"1"	"1"	"1"	"732.38489"	"1463.76250"	"1463.76131"	"0.81"	"0.00059"	"8/86"	"8"	"86"	"261739.837585449"	"HCD"	"MS2"	"11.23119"	"15.5"	"100.000"	"83.1725"	"28752"	"28752"	"28739"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.2"	""	"13.9"	""	"11.7"	""	"20.4"	""	"40.5"	"37.7"	""	"883"	"51"	"36.000"	"29.000"	"0.000325784717601998"	"24"	"0"	"0.0003218"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IETIEVMEDR"	"[K].iETIEVMEDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"732.38568"	"1463.76409"	"1463.76131"	"1.90"	"0.00139"	"7/86"	"7"	"86"	"196614.642944336"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"83.1686"	"28752"	"28752"	"28733"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.6"	""	"12.5"	""	"14.6"	""	"15.9"	""	"29.0"	"32.1"	""	"878"	"41"	"36.000"	"29.000"	"0.00333015555437811"	"19"	"0"	"0.002562"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTQFPDGVDVR"	"[R].tTQFPDGVDVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q675A5"	"Group XV phospholipase A2 OS=Rattus norvegicus OX=10116 GN=Pla2g15 PE=1 SV=1"	"Q675A5"	"Group XV phospholipase A2 OS=Rattus norvegicus OX=10116 GN=Pla2g15 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"732.38702"	"1463.76677"	"1463.76917"	"-1.64"	"-0.00120"	"8/112"	"8"	"112"	"1086035.45153809"	"HCD"	"MS2"	"18.54609"	"56.9"	"100.000"	"61.8135"	"20104"	"20104"	"20081"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"97.3"	""	"79.1"	""	"76.1"	""	"89.4"	"0.0"	"93.0"	"103.6"	""	"903"	"42"	"36.000"	"29.000"	"0.00254482401605418"	"22"	"0"	"0.003165"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTQFPDGVDVR"	"[R].tTQFPDGVDVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q675A5"	"Group XV phospholipase A2 OS=Rattus norvegicus OX=10116 GN=Pla2g15 PE=1 SV=1"	"Q675A5"	"Group XV phospholipase A2 OS=Rattus norvegicus OX=10116 GN=Pla2g15 PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"732.38715"	"1463.76702"	"1463.76917"	"-1.47"	"-0.00108"	"6/112"	"6"	"112"	"878585.773925781"	"HCD"	"MS2"	"23.79857"	"46.0"	"100.000"	"61.7036"	"20075"	"20075"	"20049"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.0"	""	"59.2"	""	"65.5"	""	"72.6"	""	"87.5"	"83.0"	""	"889"	"17"	"36.000"	"29.000"	"0.90338269136115"	"20"	"0.005183"	"0.05904"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDYPSSPPK"	"[K].dDYPSSPPk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63281"	"SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus OX=10116 GN=Ube2i PE=1 SV=1"	"P63281"	"SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus OX=10116 GN=Ube2i PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"732.39191"	"1463.77654"	"1463.77823"	"-1.16"	"-0.00085"	"7/74"	"7"	"74"	"912937.31439209"	"HCD"	"MS2"	"0"	"63.7"	"100.000"	"43.6237"	"12745"	"12745"	"12734"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.0"	""	"66.3"	""	"78.0"	""	"110.2"	""	"132.0"	"131.4"	""	"1007"	"31"	"37.000"	"30.000"	"0.0429535907407856"	"22"	"0"	"0.003772"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDYPSSPPK"	"[K].dDYPSSPPk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63281"	"SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus OX=10116 GN=Ube2i PE=1 SV=1"	"P63281"	"SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus OX=10116 GN=Ube2i PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"732.39252"	"1463.77776"	"1463.77823"	"-0.32"	"-0.00024"	"12/74"	"12"	"74"	"856091.334533691"	"HCD"	"MS2"	"0"	"57.3"	"100.000"	"43.7366"	"12782"	"12782"	"12762"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.8"	""	"66.9"	""	"72.6"	""	"86.4"	"0.7"	"119.8"	"120.8"	""	"986"	"44"	"36.000"	"29.000"	"0.00204101839686127"	"25"	"0"	"0.001845"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDYPSSPPK"	"[K].dDYPSSPPk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63281"	"SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus OX=10116 GN=Ube2i PE=1 SV=1"	"P63281"	"SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus OX=10116 GN=Ube2i PE=1 SV=1"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"732.39276"	"1463.77825"	"1463.77823"	"0.01"	"0.00001"	"12/74"	"12"	"74"	"422251.598937988"	"HCD"	"MS2"	"0"	"34.8"	"100.000"	"43.9400"	"12873"	"12873"	"12853"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.4"	""	"39.9"	""	"47.0"	""	"52.8"	""	"82.0"	"70.6"	""	"959"	"43"	"36.000"	"29.000"	"0.00226354228285892"	"24"	"0"	"0.00191"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDYPSSPPK"	"[K].dDYPSSPPk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63281"	"SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus OX=10116 GN=Ube2i PE=1 SV=1"	"P63281"	"SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus OX=10116 GN=Ube2i PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"732.39349"	"1463.77971"	"1463.77823"	"1.01"	"0.00074"	"7/74"	"7"	"74"	"411126.737426758"	"HCD"	"MS2"	"0"	"34.9"	"100.000"	"44.0760"	"12918"	"12918"	"12891"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.0"	""	"35.2"	""	"49.7"	""	"50.3"	""	"86.3"	"70.7"	""	"1011"	"39"	"37.000"	"30.000"	"0.00643755807453922"	"22"	"0"	"0.001818"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVDEFDGK"	"[K].vPVDEFDGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"732.41052"	"1463.81377"	"1463.81462"	"-0.58"	"-0.00042"	"8/70"	"8"	"70"	"518089.95715332"	"HCD"	"MS2"	"8.711199"	"35.5"	"100.000"	"76.5259"	"26086"	"26086"	"26066"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.5"	""	"35.9"	""	"39.3"	""	"67.6"	""	"76.6"	"76.8"	""	"1043"	"46"	"37.000"	"30.000"	"0.00123382712223882"	"16"	"0"	"0.001346"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVDEFDGK"	"[K].vPVDEFDGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"732.41064"	"1463.81401"	"1463.81462"	"-0.41"	"-0.00030"	"7/70"	"7"	"70"	"461985.206787109"	"HCD"	"MS2"	"7.154594"	"32.8"	"100.000"	"76.6308"	"26121"	"26121"	"26104"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.9"	""	"35.3"	""	"32.2"	""	"64.6"	"0.0"	"63.6"	"76.1"	""	"1047"	"50"	"37.000"	"30.000"	"0.000503404027733848"	"16"	"0"	"0.001941"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVDEFDGK"	"[K].vPVDEFDGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"732.41119"	"1463.81511"	"1463.81462"	"0.34"	"0.00025"	"7/70"	"7"	"70"	"468981.519226074"	"HCD"	"MS2"	"45.01774"	"33.2"	"100.000"	"76.3350"	"26000"	"26000"	"25976"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.4"	""	"42.9"	""	"38.4"	""	"58.3"	""	"69.0"	"64.2"	""	"1032"	"50"	"37.000"	"30.000"	"0.000507749730572745"	"16"	"0.001211"	"0.01501"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVDEFDGK"	"[K].vPVDEFDGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9800"	"0.0000"	"1"	"1"	"1"	"732.41125"	"1463.81523"	"1463.81462"	"0.42"	"0.00031"	"8/70"	"8"	"70"	"476314.295654297"	"HCD"	"MS2"	"45.74705"	"32.1"	"100.000"	"76.2281"	"25965"	"25965"	"25945"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.4"	""	"37.5"	""	"30.9"	""	"59.9"	""	"70.0"	"66.9"	""	"1035"	"50"	"37.000"	"30.000"	"0.000512755531482007"	"16"	"0.0008629"	"0.0105"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLMDEGTDAR"	"[K].lDLMDEGTDAR.[D]"	"N-Term(TMT6plex)"	"1"	"3"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.7255"	"0.0000"	"1"	"1"	"1"	"732.86273"	"1464.71819"	"1464.72017"	"-1.36"	"-0.00099"	"8/94"	"8"	"94"	"577530.555297852"	"HCD"	"MS2"	"20.04288"	"34.0"	"100.000"	"75.1215"	"25507"	"25507"	"25489"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.9"	""	"50.1"	""	"55.3"	""	"37.6"	""	"64.1"	"63.4"	""	"572"	"51"	"34.000"	"27.000"	"0.000206712163830221"	""	"0"	"1.419E-05"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLMDEGTDAR"	"[K].lDLMDEGTDAR.[D]"	"N-Term(TMT6plex)"	"1"	"3"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.7719"	"0.0000"	"1"	"1"	"1"	"732.86304"	"1464.71880"	"1464.72017"	"-0.94"	"-0.00069"	"9/94"	"9"	"94"	"1534755.36132813"	"HCD"	"MS2"	"0"	"73.5"	"100.000"	"75.4236"	"25629"	"25629"	"25611"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"124.3"	""	"106.6"	""	"116.9"	""	"72.7"	"0.7"	"133.5"	"141.7"	""	"572"	"57"	"34.000"	"27.000"	"6.04457865393281E-05"	""	"0"	"2.746E-06"	"1.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLMDEGTDAR"	"[K].lDLMDEGTDAR.[D]"	"N-Term(TMT6plex)"	"1"	"3"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"732.86353"	"1464.71977"	"1464.72017"	"-0.27"	"-0.00020"	"8/94"	"8"	"94"	"138889.996276855"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"75.7326"	"25755"	"25755"	"25730"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.3"	""	"14.7"	""	"11.6"	""	"15.1"	""	"13.1"	"16.5"	""	"577"	"15"	"34.000"	"27.000"	"0.855353855877773"	"19"	"0.0023"	"0.02405"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLMDEGTDAR"	"[K].lDLMDEGTDAR.[D]"	"N-Term(TMT6plex)"	"1"	"3"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"732.86365"	"1464.72002"	"1464.72017"	"-0.11"	"-0.00008"	"16/94"	"16"	"94"	"674991.032470703"	"HCD"	"MS2"	"0"	"37.2"	"100.000"	"74.9945"	"25467"	"25467"	"25446"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.0"	""	"66.5"	""	"55.8"	"2.0"	"30.8"	""	"60.2"	"72.0"	""	"579"	"65"	"34.000"	"27.000"	"8.33006841065976E-06"	""	"0"	"2.004E-05"	"0.837"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLMDEGTDAR"	"[K].lDLMDEGTDAR.[D]"	"N-Term(TMT6plex)"	"1"	"3"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"732.86371"	"1464.72014"	"1464.72017"	"-0.02"	"-0.00002"	"8/94"	"8"	"94"	"1464194.40570068"	"HCD"	"MS2"	"0"	"68.8"	"100.000"	"75.2874"	"25585"	"25585"	"25566"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"119.9"	""	"96.8"	""	"108.9"	""	"66.1"	"0.5"	"126.4"	"132.8"	""	"577"	"56"	"34.000"	"27.000"	"6.53349882740598E-05"	"26"	"0"	"6.551E-06"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INESDPEYLR"	"[R].iNESDPEYLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"732.87994"	"1464.75261"	"1464.75319"	"-0.39"	"-0.00029"	"8/96"	"8"	"96"	"1798367.08270264"	"HCD"	"MS2"	"5.133106"	"84.7"	"100.000"	"57.7196"	"18468"	"18468"	"18454"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"136.6"	""	"96.5"	""	"105.0"	""	"131.9"	""	"177.0"	"162.4"	""	"803"	"34"	"36.000"	"29.000"	"0.0146448709690631"	"21"	"0"	"0.0001596"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INESDPEYLR"	"[R].iNESDPEYLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"732.88000"	"1464.75273"	"1464.75319"	"-0.31"	"-0.00023"	"8/96"	"8"	"96"	"1766475.03790283"	"HCD"	"MS2"	"6.266882"	"91.5"	"100.000"	"57.4665"	"18380"	"18380"	"18361"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"139.9"	""	"117.2"	""	"123.5"	""	"135.1"	""	"180.2"	"177.4"	""	"803"	"23"	"36.000"	"29.000"	"0.210710195290284"	"21"	"0"	"0.002734"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INESDPEYLR"	"[R].iNESDPEYLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"732.88013"	"1464.75298"	"1464.75319"	"-0.14"	"-0.00011"	"4/96"	"4"	"96"	"416837.143432617"	"HCD"	"MS2"	"16.90302"	"30.8"	"100.000"	"57.7638"	"18501"	"18501"	"18479"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.8"	""	"38.3"	""	"39.1"	""	"46.1"	""	"64.3"	"63.0"	""	"804"	"16"	"36.000"	"29.000"	"1.08449125184286"	"14"	"0.0023"	"0.02324"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQVANSAFVER"	"[K].dQVANSAFVER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"732.88507"	"1464.76286"	"1464.76442"	"-1.06"	"-0.00078"	"6/116"	"6"	"116"	"184432.454406738"	"HCD"	"MS2"	"0"	"17.6"	"100.000"	"48.3652"	"14672"	"14672"	"14642"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.4"	""	"21.7"	""	"17.8"	""	"38.1"	""	"32.3"	"33.8"	""	"875"	"19"	"36.000"	"29.000"	"0.534537351322132"	"16"	"0.00912"	"0.1193"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQVANSAFVER"	"[K].dQVANSAFVER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6415"	"0.0000"	"1"	"1"	"1"	"732.88562"	"1464.76396"	"1464.76442"	"-0.31"	"-0.00023"	"9/116"	"9"	"116"	"1780959.98120117"	"HCD"	"MS2"	"0"	"87.7"	"100.000"	"48.0338"	"14536"	"14536"	"14518"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"151.1"	""	"108.0"	""	"113.5"	""	"129.0"	"0.7"	"173.1"	"155.9"	""	"919"	"53"	"36.000"	"29.000"	"0.000213444768964854"	""	"0"	"6.261E-06"	"0.947"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQVANSAFVER"	"[K].dQVANSAFVER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"732.88562"	"1464.76396"	"1464.76442"	"-0.31"	"-0.00023"	"9/116"	"9"	"116"	"2205683.79571533"	"HCD"	"MS2"	"0"	"108.6"	"100.000"	"47.7334"	"14414"	"14414"	"14397"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"198.0"	""	"143.5"	""	"137.1"	""	"185.1"	"2.3"	"183.5"	"177.7"	""	"919"	"51"	"36.000"	"29.000"	"0.000328311061831698"	""	"0"	"1.05E-05"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQVANSAFVER"	"[K].dQVANSAFVER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"732.88580"	"1464.76433"	"1464.76442"	"-0.06"	"-0.00005"	"10/116"	"10"	"116"	"2277808.66119385"	"HCD"	"MS2"	"0"	"112.8"	"100.000"	"48.0732"	"14540"	"14540"	"14524"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"209.1"	""	"132.8"	""	"156.3"	""	"180.8"	"1.5"	"206.0"	"180.9"	""	"921"	"57"	"36.000"	"29.000"	"9.59908051666301E-05"	""	"0"	"4.097E-06"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQVANSAFVER"	"[K].dQVANSAFVER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6780"	"0.0000"	"1"	"1"	"1"	"732.88611"	"1464.76494"	"1464.76442"	"0.35"	"0.00026"	"10/116"	"10"	"116"	"1866759.85797119"	"HCD"	"MS2"	"0"	"91.8"	"100.000"	"48.3600"	"14657"	"14657"	"14644"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"162.7"	""	"114.0"	""	"111.7"	""	"153.7"	""	"173.3"	"160.0"	""	"915"	"59"	"36.000"	"29.000"	"6.10086055214721E-05"	""	"0"	"8.676E-06"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMPEQTGEK"	"[R].sMPEQTGEk.[-]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"732.89056"	"1464.77385"	"1464.77685"	"-2.05"	"-0.00150"	"8/86"	"8"	"86"	"1785170.67602539"	"HCD"	"MS2"	"0"	"145.4"	"100.000"	"35.9629"	"9631"	"9631"	"9609"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"250.7"	""	"165.9"	""	"189.4"	""	"169.4"	"0.8"	"292.3"	"310.5"	""	"968"	"42"	"36.000"	"29.000"	"0.002943373406189"	"24"	"0"	"0.002162"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMADEVNEK"	"[K].aMADEVNEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"732.89111"	"1464.77495"	"1464.77685"	"-1.30"	"-0.00095"	"8/76"	"8"	"76"	"1065858.83612061"	"HCD"	"MS2"	"37.27929"	"92.2"	"100.000"	"44.6343"	"13152"	"13152"	"13128"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"82.9"	""	"77.4"	""	"50.0"	""	"146.4"	"3.2"	"254.7"	"267.6"	""	"958"	"50"	"36.000"	"29.000"	"0.000493554951691535"	"26"	"0"	"0.0002459"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMADEVNEK"	"[K].aMADEVNEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.6333"	"0.0000"	"1"	"1"	"1"	"488.93011"	"1464.77579"	"1464.77685"	"-0.72"	"-0.00035"	"6/76"	"6"	"76"	"5383484.33441162"	"HCD"	"MS2"	"37.00455"	"173.4"	"100.000"	"44.8285"	"13230"	"13230"	"13214"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"163.4"	""	"141.5"	""	"149.2"	""	"254.4"	""	"437.0"	"515.1"	""	"977"	"30"	"36.000"	"29.000"	"0.0536864352562786"	"25"	"0.005001"	"0.05698"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMADEVNEK"	"[K].aMADEVNEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"732.89160"	"1464.77593"	"1464.77685"	"-0.63"	"-0.00046"	"14/76"	"14"	"76"	"1513419.59057617"	"HCD"	"MS2"	"10.66605"	"131.1"	"100.000"	"44.8011"	"13208"	"13208"	"13184"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"117.1"	""	"83.9"	""	"71.8"	""	"220.5"	""	"353.5"	"410.1"	""	"975"	"44"	"36.000"	"29.000"	"0.00192741227283212"	"28"	"0"	"0.0005188"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMPEQTGEK"	"[R].sMPEQTGEk.[-]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"732.89191"	"1464.77654"	"1464.77685"	"-0.21"	"-0.00016"	"8/86"	"8"	"86"	"1647291.86480713"	"HCD"	"MS2"	"0"	"131.0"	"100.000"	"36.0494"	"9661"	"9661"	"9643"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"240.7"	""	"157.5"	""	"164.4"	""	"151.2"	"3.6"	"266.3"	"258.3"	""	"994"	"43"	"36.000"	"29.000"	"0.00273751425113485"	"25"	"0.000936"	"0.01252"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMADEVNEK"	"[K].aMADEVNEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.6078"	"0.0000"	"1"	"1"	"1"	"732.89221"	"1464.77715"	"1464.77685"	"0.20"	"0.00015"	"8/76"	"8"	"76"	"1847393.50897217"	"HCD"	"MS2"	"6.071086"	"167.8"	"100.000"	"44.9460"	"13278"	"13278"	"13257"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"174.9"	""	"135.1"	""	"121.2"	""	"228.0"	""	"430.8"	"517.3"	""	"989"	"51"	"36.000"	"29.000"	"0.000377716794979168"	""	"0"	"0.000349"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMADEVNEK"	"[K].aMADEVNEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.6981"	"0.0000"	"1"	"1"	"1"	"732.89227"	"1464.77727"	"1464.77685"	"0.29"	"0.00021"	"8/76"	"8"	"76"	"1803340.06634521"	"HCD"	"MS2"	"6.336864"	"167.1"	"100.000"	"45.0910"	"13326"	"13326"	"13307"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"163.1"	""	"118.2"	""	"113.0"	""	"229.9"	""	"454.5"	"519.5"	""	"990"	"53"	"36.000"	"29.000"	"0.000256215381815531"	""	"0"	"0.0003722"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDIPSSDAK"	"[K].sSDIPSSDAk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"732.90002"	"1464.79277"	"1464.79461"	"-1.25"	"-0.00092"	"9/86"	"9"	"86"	"1312074.74365234"	"HCD"	"MS2"	"0"	"96.4"	"100.000"	"39.3356"	"10999"	"10999"	"10975"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"155.8"	""	"119.9"	""	"116.3"	""	"158.9"	""	"185.0"	"179.8"	""	"997"	"45"	"36.000"	"29.000"	"0.0015054459326204"	"23"	"0"	"9.492E-05"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGNLTEEDK"	"[K].tGNLTEEDk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.0667"	"0.0000"	"1"	"1"	"1"	"732.90015"	"1464.79302"	"1464.79461"	"-1.09"	"-0.00080"	"8/90"	"8"	"90"	"253914.947753906"	"HCD"	"MS2"	"0"	"26.5"	"100.000"	"39.8685"	"11217"	"11217"	"11188"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.8"	""	"21.0"	""	"24.9"	""	"45.2"	"0.7"	"69.2"	"64.9"	""	"997"	"30"	"36.000"	"29.000"	"0.0507767806944977"	""	"0.003717"	"0.03853"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDIPSSDAK"	"[K].sSDIPSSDAk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"732.90039"	"1464.79350"	"1464.79461"	"-0.75"	"-0.00055"	"9/86"	"9"	"86"	"1248834.85430908"	"HCD"	"MS2"	"0"	"95.4"	"100.000"	"39.5157"	"11063"	"11063"	"11038"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"152.3"	"2.5"	"122.9"	""	"126.6"	""	"155.7"	"0.5"	"164.6"	"177.8"	""	"995"	"46"	"36.000"	"29.000"	"0.00127583080816757"	"24"	"0"	"2.776E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGNLTEEDK"	"[K].tGNLTEEDk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.4848"	"0.0000"	"1"	"1"	"1"	"732.90045"	"1464.79363"	"1464.79461"	"-0.67"	"-0.00049"	"8/90"	"8"	"90"	"252440.081237793"	"HCD"	"MS2"	"0"	"24.8"	"100.000"	"40.0210"	"11270"	"11270"	"11241"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.9"	""	"20.5"	""	"22.7"	""	"44.7"	"0.1"	"54.1"	"62.9"	""	"999"	"33"	"36.000"	"29.000"	"0.0263958403261702"	""	"0"	"0.001296"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKTTNVVEESK"	"[K].TKTTNVVEESk.[D]"	"K11(TMT6plex)"	"1"	"1"	"B4F777"	"High mobility group nucleosome-binding domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Hmgn5 PE=2 SV=1"	"B4F777"	"High mobility group nucleosome-binding domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Hmgn5 PE=2 SV=1"	"1"	"2"	"2"	"0.0784"	"0.0000"	"1"	"1"	"1"	"732.91925"	"1464.83122"	"1464.81070"	"14.01"	"0.01026"	"15/116"	"15"	"116"	"547333.989624023"	"HCD"	"MS2"	"0"	"45.5"	"100.000"	"41.1814"	"11741"	"11741"	"11713"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.7"	""	"43.9"	""	"53.1"	""	"79.7"	""	"112.9"	"98.1"	""	"929"	"51"	"36.000"	"29.000"	"0.000331883543462076"	"28"	"0.002973"	"0.03016"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKTTNVVEESK"	"[K].TKTTNVVEESk.[D]"	"K11(TMT6plex)"	"1"	"1"	"B4F777"	"High mobility group nucleosome-binding domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Hmgn5 PE=2 SV=1"	"B4F777"	"High mobility group nucleosome-binding domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Hmgn5 PE=2 SV=1"	"1"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"732.91974"	"1464.83220"	"1464.81070"	"14.68"	"0.01075"	"15/116"	"15"	"116"	"601667.17578125"	"HCD"	"MS2"	"0"	"52.0"	"100.000"	"41.0039"	"11678"	"11678"	"11660"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.9"	""	"48.0"	""	"65.5"	""	"91.5"	"0.8"	"123.7"	"112.5"	""	"961"	"55"	"36.000"	"29.000"	"0.000154416388881667"	"25"	"0.003111"	"0.03069"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSMDELFSHR"	"[K].dSMDELFSHR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"489.23596"	"1465.69333"	"1465.69429"	"-0.66"	"-0.00032"	"12/86"	"12"	"86"	"1193349.88275146"	"HCD"	"MS2"	"34.82187"	"34.1"	"100.000"	"64.5729"	"21236"	"21236"	"21215"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.1"	""	"32.8"	""	"32.2"	""	"64.0"	""	"80.1"	"81.3"	""	"397"	"25"	"32.000"	"25.000"	"0.0633520264237501"	"22"	"0"	"0.00257"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSMDELFSHR"	"[K].dSMDELFSHR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"489.23636"	"1465.69452"	"1465.69429"	"0.16"	"0.00008"	"10/86"	"10"	"86"	"668429.486450195"	"HCD"	"MS2"	"39.48179"	"25.3"	"100.000"	"64.7307"	"21282"	"21282"	"21255"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.8"	""	"25.3"	""	"26.1"	""	"42.2"	""	"59.7"	"62.9"	""	"410"	"19"	"33.000"	"26.000"	"0.289570196647665"	"19"	"0.0006732"	"0.008641"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFQEQLESAR"	"[K].eFQEQLESAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"733.37933"	"1465.75139"	"1465.74844"	"2.01"	"0.00148"	"6/100"	"6"	"100"	"326855.485656738"	"HCD"	"MS2"	"29.53914"	"25.8"	"100.000"	"54.5596"	"17183"	"17183"	"17152"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.3"	""	"32.5"	""	"34.8"	""	"39.0"	""	"47.8"	"53.7"	""	"806"	"6"	"36.000"	"29.000"	"10.7970483490207"	"18"	"0.00447"	"0.04727"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMADEVNEK"	"[K].aMADEVnEk.[Q]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"733.38409"	"1465.76091"	"1465.76087"	"0.03"	"0.00002"	"8/76"	"8"	"76"	"640384.892883301"	"HCD"	"MS2"	"0"	"66.0"	"100.000"	"46.6688"	"13969"	"13969"	"13949"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.9"	""	"42.0"	""	"43.0"	""	"106.6"	""	"191.0"	"197.5"	""	"896"	"45"	"36.000"	"29.000"	"0.00140371200449338"	"27"	"0"	"0.0002738"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMADEVNEK"	"[K].aMADEVnEk.[Q]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"733.38428"	"1465.76128"	"1465.76087"	"0.28"	"0.00021"	"8/76"	"8"	"76"	"586809.862976074"	"HCD"	"MS2"	"0"	"60.2"	"100.000"	"46.4620"	"13897"	"13897"	"13874"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.2"	""	"47.2"	""	"39.0"	""	"101.1"	""	"162.1"	"180.8"	""	"897"	"54"	"36.000"	"29.000"	"0.000160976487688285"	""	"0"	"0.0002161"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLSMIEEEIR"	"[R].tLSmIEEEIR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"733.39087"	"1465.77446"	"1465.77696"	"-1.71"	"-0.00125"	"7/86"	"7"	"86"	"156450.858093262"	"HCD"	"MS2"	"13.34951"	"8.2"	"100.000"	"86.5712"	"30085"	"30085"	"30073"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.6"	""	"6.9"	""	"14.3"	""	"18.2"	""	"17.2"	"17.8"	""	"932"	"36"	"36.000"	"29.000"	"0.0126586069927901"	"15"	"0.002379"	"0.02458"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLSMIEEEIR"	"[R].tLSmIEEEIR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"733.39105"	"1465.77483"	"1465.77696"	"-1.46"	"-0.00107"	"7/86"	"7"	"86"	"169947.41204834"	"HCD"	"MS2"	"11.25212"	"9.1"	"100.000"	"86.5663"	"30087"	"30087"	"30072"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.3"	""	"9.0"	""	"8.7"	""	"24.4"	""	"20.4"	"18.7"	""	"914"	"33"	"36.000"	"29.000"	"0.0208408870589743"	"15"	"0.00447"	"0.04714"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLSMIEEEIR"	"[R].tLSmIEEEIR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"733.39172"	"1465.77617"	"1465.77696"	"-0.54"	"-0.00040"	"7/86"	"7"	"86"	"165888.309509277"	"HCD"	"MS2"	"5.530043"	"8.7"	"100.000"	"86.8446"	"30196"	"30196"	"30182"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.2"	""	"7.8"	""	"6.0"	""	"25.9"	""	"15.6"	"19.0"	""	"910"	"35"	"36.000"	"29.000"	"0.0141583093338324"	"15"	"0.001211"	"0.01566"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].LGEYGFQNAVLVR.[Y]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9873"	"0.0000"	"1"	"1"	"1"	"733.39178"	"1465.77629"	"1465.77979"	"-2.39"	"-0.00175"	"10/108"	"10"	"108"	"670461.513305664"	"HCD"	"MS2"	"2.851042"	"9.9"	"100.000"	"82.0247"	"28299"	"28299"	"28281"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.3"	""	"7.6"	""	"13.3"	""	"16.6"	""	"23.2"	"21.9"	"NoQuanLabels"	"910"	"79"	"36.000"	"29.000"	"6.25189098630695E-07"	"18"	"0"	"8.884E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].LGEYGFQNAVLVR.[Y]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9891"	"0.0000"	"1"	"1"	"1"	"733.39227"	"1465.77727"	"1465.77979"	"-1.72"	"-0.00126"	"11/108"	"11"	"108"	"702641.315063477"	"HCD"	"MS2"	"6.01121"	"10.2"	"100.000"	"82.0033"	"28288"	"28288"	"28271"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.5"	""	"11.8"	""	"9.6"	""	"19.6"	""	"23.9"	"22.0"	"NoQuanLabels"	"912"	"92"	"36.000"	"29.000"	"2.87716549082968E-08"	"19"	"0"	"1.611E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLSMIEEEIR"	"[R].tLSmIEEEIR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"733.39240"	"1465.77751"	"1465.77696"	"0.38"	"0.00028"	"6/86"	"6"	"86"	"114825.110961914"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"86.8723"	"30204"	"30204"	"30184"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.4"	""	"2.5"	""	"6.9"	""	"11.2"	""	"10.1"	"12.9"	""	"927"	"21"	"36.000"	"29.000"	"0.368171136794705"	"17"	"0.004867"	"0.05241"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].LGEYGFQNAVLVR.[Y]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"733.39288"	"1465.77849"	"1465.77979"	"-0.89"	"-0.00065"	"7/108"	"7"	"108"	"109919.682983398"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"82.3319"	"28421"	"28421"	"28409"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.9"	""	"3.1"	""	"5.9"	""	"3.3"	""	"3.8"	"6.9"	"NoQuanLabels"	"930"	"53"	"36.000"	"29.000"	"0.000237932053526243"	"17"	"0"	"0.001233"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].LGEYGFQNAVLVR.[Y]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"733.39307"	"1465.77886"	"1465.77979"	"-0.64"	"-0.00047"	"7/108"	"7"	"108"	"120432.796325684"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"82.2991"	"28405"	"28405"	"28385"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.2"	""	"4.0"	""	"5.1"	""	"4.9"	""	"3.5"	"6.4"	"NoQuanLabels"	"920"	"64"	"36.000"	"29.000"	"2.02189143101399E-05"	"16"	"0"	"0.0005776"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDNSMGFGAER"	"[R].gPDNSMGFGAER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"733.84784"	"1466.68840"	"1466.68954"	"-0.78"	"-0.00057"	"8/120"	"8"	"120"	"447253.203674316"	"HCD"	"MS2"	"39.92798"	"38.8"	"100.000"	"47.4865"	"14302"	"14302"	"14273"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.8"	""	"39.1"	""	"45.9"	""	"61.4"	"2.2"	"72.7"	"83.2"	""	"379"	"32"	"32.000"	"25.000"	"0.0119017058995124"	"15"	"0"	"0.001347"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALETQMEEMR"	"[R].aLETQMEEMR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"733.86035"	"1466.71343"	"1466.71807"	"-3.16"	"-0.00232"	"8/92"	"8"	"92"	"321200.783508301"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"61.4806"	"19984"	"19984"	"19953"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.4"	""	"23.9"	""	"21.3"	""	"48.2"	"0.6"	"72.7"	"52.0"	""	"534"	"35"	"34.000"	"27.000"	"0.00778953012738312"	"21"	"0"	"0.001037"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALETQMEEMR"	"[R].aLETQMEEMR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"733.86328"	"1466.71929"	"1466.71807"	"0.83"	"0.00061"	"8/92"	"8"	"92"	"361560.557983398"	"HCD"	"MS2"	"0"	"25.6"	"100.000"	"61.7332"	"20071"	"20071"	"20049"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.1"	""	"21.0"	""	"20.0"	""	"47.4"	""	"82.3"	"54.4"	""	"596"	"40"	"34.000"	"27.000"	"0.0027556005583359"	"21"	"0"	"0.0006208"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMEGAGTDEK"	"[K].aMEGAGTDEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7885"	"0.0000"	"1"	"1"	"1"	"733.88086"	"1466.75444"	"1466.75612"	"-1.14"	"-0.00084"	"9/84"	"9"	"84"	"1561524.36999512"	"HCD"	"MS2"	"0"	"137.7"	"100.000"	"35.6004"	"9483"	"9483"	"9465"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"264.8"	""	"191.1"	""	"225.6"	""	"137.9"	"1.0"	"231.7"	"249.2"	""	"807"	"52"	"36.000"	"29.000"	"0.000241459078606839"	"27"	"0"	"3.354E-05"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMEGAGTDEK"	"[K].aMEGAGTDEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"733.88098"	"1466.75469"	"1466.75612"	"-0.97"	"-0.00071"	"9/84"	"9"	"84"	"1402621.69445801"	"HCD"	"MS2"	"0"	"132.9"	"100.000"	"35.7191"	"9527"	"9527"	"9514"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"249.8"	""	"187.4"	""	"216.1"	""	"142.9"	""	"230.3"	"238.4"	""	"807"	"53"	"36.000"	"29.000"	"0.00021127277616235"	"26"	"0"	"4.085E-05"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMEGAGTDEK"	"[K].aMEGAGTDEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"733.88116"	"1466.75505"	"1466.75612"	"-0.72"	"-0.00053"	"9/84"	"9"	"84"	"4696794.17034912"	"HCD"	"MS2"	"0"	"365.8"	"100.000"	"35.3132"	"9367"	"9367"	"9350"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"756.7"	""	"568.8"	""	"565.8"	""	"388.9"	"2.9"	"570.9"	"599.3"	""	"822"	"51"	"36.000"	"29.000"	"0.00029501345371253"	"26"	"0"	"4.809E-05"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMEGAGTDEK"	"[K].aMEGAGTDEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7885"	"0.0000"	"1"	"1"	"1"	"733.88147"	"1466.75566"	"1466.75612"	"-0.31"	"-0.00023"	"9/84"	"9"	"84"	"4387553.68554688"	"HCD"	"MS2"	"0"	"354.1"	"100.000"	"35.4389"	"9413"	"9413"	"9394"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"718.6"	""	"527.0"	""	"552.7"	""	"398.7"	"0.8"	"558.5"	"587.1"	""	"828"	"52"	"36.000"	"29.000"	"0.000264850221889816"	"27"	"0"	"0.0001092"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEETTQTYR"	"[K].lPEETTQTYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z0U5"	"Aldehyde oxidase 1 OS=Rattus norvegicus OX=10116 GN=Aox1 PE=1 SV=1"	"Q9Z0U5"	"Aldehyde oxidase 1 OS=Rattus norvegicus OX=10116 GN=Aox1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"733.88708"	"1466.76689"	"1466.76884"	"-1.33"	"-0.00097"	"9/88"	"9"	"88"	"616130.796447754"	"HCD"	"MS2"	"0"	"35.0"	"100.000"	"48.5080"	"14730"	"14730"	"14704"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.6"	""	"37.0"	""	"39.2"	""	"59.6"	""	"69.6"	"84.8"	""	"849"	"35"	"36.000"	"29.000"	"0.0132702069134412"	"25"	"0"	"0.0002549"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEETTQTYR"	"[K].lPEETTQTYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z0U5"	"Aldehyde oxidase 1 OS=Rattus norvegicus OX=10116 GN=Aox1 PE=1 SV=1"	"Q9Z0U5"	"Aldehyde oxidase 1 OS=Rattus norvegicus OX=10116 GN=Aox1 PE=1 SV=1"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"733.88751"	"1466.76775"	"1466.76884"	"-0.74"	"-0.00055"	"8/88"	"8"	"88"	"430948.599853516"	"HCD"	"MS2"	"0"	"25.8"	"100.000"	"48.8314"	"14849"	"14849"	"14824"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.3"	""	"28.8"	""	"25.7"	""	"44.7"	""	"49.4"	"67.0"	""	"850"	"27"	"36.000"	"29.000"	"0.0800550863033166"	"23"	"0.004069"	"0.04379"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEGEGSMTK"	"[K].lGEGEGSMTk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"733.89960"	"1466.79192"	"1466.79250"	"-0.40"	"-0.00029"	"9/84"	"9"	"84"	"988015.770996094"	"HCD"	"MS2"	"0"	"91.2"	"100.000"	"49.7332"	"15229"	"15229"	"15206"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"133.4"	""	"103.1"	""	"111.3"	""	"129.6"	"1.0"	"195.5"	"192.2"	""	"874"	"49"	"36.000"	"29.000"	"0.000504059073667817"	"23"	"0"	"4.562E-05"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEGEGSMTK"	"[K].lGEGEGSMTk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"733.90137"	"1466.79546"	"1466.79250"	"2.02"	"0.00148"	"8/84"	"8"	"84"	"681208.701904297"	"HCD"	"MS2"	"10.37819"	"68.9"	"100.000"	"50.0678"	"15354"	"15354"	"15326"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"99.0"	""	"72.6"	""	"83.5"	""	"89.5"	""	"158.8"	"151.6"	""	"879"	"38"	"36.000"	"29.000"	"0.00665210168687712"	"22"	"0"	"9.463E-05"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQQPGVPGSLAR"	"[K].qQQPGVPGSLAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"733.91687"	"1466.82646"	"1466.82769"	"-0.84"	"-0.00061"	"11/110"	"11"	"110"	"743465.333129883"	"HCD"	"MS2"	"0"	"40.4"	"100.000"	"41.1667"	"11744"	"11744"	"11722"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.8"	""	"45.8"	""	"45.8"	""	"73.5"	""	"90.7"	"77.5"	""	"870"	"18"	"36.000"	"29.000"	"0.691017835640034"	"14"	"0.003653"	"0.03763"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQQPGVPGSLAR"	"[K].qQQPGVPGSLAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"733.91687"	"1466.82646"	"1466.82769"	"-0.84"	"-0.00061"	"10/110"	"10"	"110"	"942313.389221191"	"HCD"	"MS2"	"0"	"44.9"	"100.000"	"41.3878"	"11824"	"11824"	"11802"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.8"	""	"49.0"	""	"54.7"	""	"82.3"	""	"110.1"	"85.4"	""	"870"	"36"	"36.000"	"29.000"	"0.0111298486080396"	"16"	"0"	"0.001979"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQQPGVPGSLAR"	"[K].qQQPGVPGSLAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"733.91736"	"1466.82744"	"1466.82769"	"-0.17"	"-0.00013"	"4/110"	"4"	"110"	"161829.095031738"	"HCD"	"MS2"	"0"	"15.6"	"100.000"	"41.7025"	"11952"	"11952"	"11926"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.9"	""	"15.9"	""	"20.9"	""	"24.1"	""	"31.2"	"31.9"	""	"870"	"6"	"36.000"	"29.000"	"10.4109235403634"	"13"	"0.004942"	"0.05574"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVLNDELPGR"	"[R].ePVLNDELPGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"0.7903"	"0.0000"	"1"	"1"	"1"	"489.93802"	"1467.79950"	"1467.80047"	"-0.66"	"-0.00032"	"15/104"	"15"	"104"	"2055821.05755615"	"HCD"	"MS2"	"56.54358"	"31.9"	"100.000"	"65.8101"	"21735"	"21735"	"21718"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.5"	""	"35.5"	""	"36.0"	""	"70.3"	"1.9"	"72.6"	"57.9"	""	"878"	"62"	"36.000"	"29.000"	"2.66971265561357E-05"	"29"	"0"	"0.0001185"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVLNDELPGR"	"[R].ePVLNDELPGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"734.40344"	"1467.79961"	"1467.80047"	"-0.59"	"-0.00043"	"8/104"	"8"	"104"	"1334034.44763184"	"HCD"	"MS2"	"26.05148"	"56.5"	"100.000"	"65.4453"	"21571"	"21571"	"21549"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"64.2"	""	"71.3"	""	"71.1"	""	"109.1"	""	"110.9"	"109.7"	""	"875"	"50"	"36.000"	"29.000"	"0.000407359695517176"	"23"	"0"	"5.048E-05"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVLNDELPGR"	"[R].ePVLNDELPGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8868"	"0.0000"	"1"	"1"	"1"	"734.40375"	"1467.80022"	"1467.80047"	"-0.17"	"-0.00013"	"8/104"	"8"	"104"	"1640555.45532227"	"HCD"	"MS2"	"0"	"59.6"	"100.000"	"65.9645"	"21798"	"21798"	"21780"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"64.6"	""	"62.8"	""	"81.9"	""	"104.0"	""	"126.2"	"127.4"	""	"868"	"53"	"36.000"	"29.000"	"0.000223094944786773"	"22"	"0"	"6.025E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVLNDELPGR"	"[R].ePVLNDELPGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"489.93826"	"1467.80024"	"1467.80047"	"-0.16"	"-0.00008"	"15/104"	"15"	"104"	"1296032.98748779"	"HCD"	"MS2"	"54.68996"	"25.0"	"100.000"	"65.9432"	"21774"	"21774"	"21753"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.7"	""	"28.5"	""	"28.2"	""	"49.9"	""	"56.0"	"50.1"	""	"868"	"58"	"36.000"	"29.000"	"7.28600943865192E-05"	"23"	"0"	"2.48E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVLNDELPGR"	"[R].ePVLNDELPGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8679"	"0.0000"	"1"	"1"	"1"	"734.40387"	"1467.80046"	"1467.80047"	"-0.01"	"-0.00001"	"8/104"	"8"	"104"	"1535440.87158203"	"HCD"	"MS2"	"0"	"64.8"	"100.000"	"66.0564"	"21820"	"21820"	"21801"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.4"	""	"74.8"	""	"88.2"	""	"120.2"	""	"129.8"	"141.7"	""	"870"	"53"	"36.000"	"29.000"	"0.000232535496337683"	"23"	"0"	"4.422E-05"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVLNDELPGR"	"[R].ePVLNDELPGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"734.40393"	"1467.80058"	"1467.80047"	"0.08"	"0.00006"	"8/104"	"8"	"104"	"1337855.26733398"	"HCD"	"MS2"	"22.90514"	"56.3"	"100.000"	"65.3607"	"21552"	"21552"	"21533"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.7"	""	"68.2"	""	"74.0"	""	"101.7"	"0.7"	"117.2"	"102.8"	""	"872"	"52"	"36.000"	"29.000"	"0.000266370722858829"	"26"	"0"	"5.27E-05"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVLNDELPGR"	"[R].ePVLNDELPGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"734.40393"	"1467.80058"	"1467.80047"	"0.08"	"0.00006"	"8/104"	"8"	"104"	"11489685.8701172"	"HCD"	"MS2"	"0"	"274.9"	"77.164"	"65.7428"	"21693"	"21693"	"21676"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"309.3"	""	"343.4"	""	"372.7"	""	"487.9"	""	"544.7"	"551.3"	""	"872"	"51"	"36.000"	"29.000"	"0.000366004554122458"	"23"	"0"	"4.361E-05"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVLNDELPGR"	"[R].ePVLNDELPGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"734.40399"	"1467.80071"	"1467.80047"	"0.16"	"0.00012"	"8/104"	"8"	"104"	"10860103.2541504"	"HCD"	"MS2"	"0"	"293.4"	"82.101"	"65.6514"	"21671"	"21671"	"21654"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"322.6"	""	"343.9"	""	"398.6"	""	"533.1"	""	"600.5"	"588.6"	""	"872"	"49"	"36.000"	"29.000"	"0.000532704651831884"	"23"	"0"	"0.0001158"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDGGGWWYNR"	"[K].eDGGGWWYNR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"734.84393"	"1468.68059"	"1468.68069"	"-0.07"	"-0.00005"	"9/76"	"9"	"76"	"1301691.2467041"	"HCD"	"MS2"	"38.20164"	"74.3"	"100.000"	"72.7156"	"24535"	"24535"	"24515"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"115.2"	""	"69.2"	""	"57.5"	""	"161.1"	""	"167.6"	"139.9"	""	"328"	"42"	"32.000"	"25.000"	"0.001131993278298"	"22"	"0"	"6.09E-05"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDGGGWWYNR"	"[K].eDGGGWWYNR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"734.84424"	"1468.68120"	"1468.68069"	"0.35"	"0.00025"	"6/76"	"6"	"76"	"2076563.4418335"	"HCD"	"MS2"	"2.551104"	"116.0"	"100.000"	"72.8641"	"24610"	"24610"	"24593"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"195.3"	""	"114.0"	""	"100.7"	""	"245.4"	""	"250.4"	"194.9"	""	"341"	"39"	"32.000"	"25.000"	"0.0020032003311719"	"25"	"0"	"0.0001414"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDGGGWWYNR"	"[K].eDGGGWWYNR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"734.84442"	"1468.68157"	"1468.68069"	"0.59"	"0.00044"	"8/76"	"8"	"76"	"1213462.9052124"	"HCD"	"MS2"	"49.60994"	"67.4"	"100.000"	"72.5620"	"24486"	"24486"	"24465"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"102.2"	""	"64.6"	""	"51.5"	""	"143.8"	"0.3"	"156.9"	"120.9"	""	"339"	"22"	"32.000"	"25.000"	"0.0993504188851279"	"22"	"0"	"0.0002311"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDGGGWWYNR"	"[K].eDGGGWWYNR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"734.84448"	"1468.68169"	"1468.68069"	"0.68"	"0.00050"	"8/76"	"8"	"76"	"1897971.75946045"	"HCD"	"MS2"	"3.422728"	"104.2"	"100.000"	"73.0129"	"24656"	"24656"	"24638"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"167.7"	""	"103.7"	""	"80.0"	""	"222.1"	""	"231.4"	"186.5"	""	"339"	"49"	"32.000"	"25.000"	"0.000204724445050599"	"24"	"0"	"2.968E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIISDTSGEFR"	"[K].dIISDTSGEFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.8780"	"0.0000"	"1"	"1"	"1"	"490.25385"	"1468.74698"	"1468.74810"	"-0.76"	"-0.00037"	"12/96"	"12"	"96"	"2395023.22332764"	"HCD"	"MS2"	"21.6783"	"33.8"	"100.000"	"71.9417"	"24233"	"24233"	"24214"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.9"	""	"32.6"	""	"38.7"	""	"67.0"	""	"57.9"	"77.4"	""	"719"	"41"	"35.000"	"28.000"	"0.00298331350921435"	"21"	"0"	"0.001262"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIISDTSGEFR"	"[K].dIISDTSGEFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"734.87720"	"1468.74712"	"1468.74810"	"-0.67"	"-0.00049"	"9/96"	"9"	"96"	"1800497.98913574"	"HCD"	"MS2"	"0"	"82.1"	"100.000"	"71.7252"	"24146"	"24146"	"24136"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"72.3"	""	"64.1"	""	"79.5"	""	"167.6"	""	"209.0"	"197.3"	""	"720"	"60"	"35.000"	"28.000"	"3.51805399544092E-05"	"21"	"0"	"5.835E-06"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSDPFVEAEK"	"[R].AFSDPFVEAEk.[S]"	"K11(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.9787"	"0.0000"	"1"	"1"	"1"	"734.87738"	"1468.74748"	"1468.75213"	"-3.16"	"-0.00232"	"7/94"	"7"	"94"	"163193.06628418"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"80.0005"	"27484"	"27484"	"27461"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.2"	""	"9.5"	""	"10.3"	""	"13.2"	""	"17.7"	"12.8"	""	"717"	"47"	"35.000"	"28.000"	"0.000737036778660316"	"16"	"0.001374"	"0.01783"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSDPFVEAEK"	"[R].AFSDPFVEAEk.[S]"	"K11(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"734.87738"	"1468.74748"	"1468.75213"	"-3.16"	"-0.00232"	"6/94"	"6"	"94"	"138411.258728027"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"80.1131"	"27526"	"27526"	"27498"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.3"	""	"11.2"	""	"9.6"	""	"11.3"	""	"16.1"	"17.1"	""	"717"	"30"	"35.000"	"28.000"	"0.032545366006888"	"14"	"0.005617"	"0.06425"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIISDTSGEFR"	"[K].dIISDTSGEFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"490.25403"	"1468.74753"	"1468.74810"	"-0.39"	"-0.00019"	"12/96"	"12"	"96"	"2238733.00793457"	"HCD"	"MS2"	"17.54436"	"33.5"	"100.000"	"72.0681"	"24271"	"24271"	"24250"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.8"	""	"40.9"	""	"39.2"	""	"65.6"	""	"52.0"	"73.7"	""	"716"	"44"	"35.000"	"28.000"	"0.00156632913646654"	"20"	"0"	"0.0006785"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIISDTSGEFR"	"[K].dIISDTSGEFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9254"	"0.0000"	"1"	"1"	"1"	"734.87805"	"1468.74883"	"1468.74810"	"0.49"	"0.00036"	"9/96"	"9"	"96"	"1963070.42907715"	"HCD"	"MS2"	"0"	"89.1"	"100.000"	"72.3244"	"24390"	"24390"	"24373"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"85.4"	""	"73.2"	""	"89.0"	""	"162.7"	"1.4"	"220.7"	"217.0"	""	"734"	"67"	"35.000"	"28.000"	"7.39036799699498E-06"	"21"	"0"	"4.7E-06"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIISDTSGEFR"	"[K].dIISDTSGEFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"734.87817"	"1468.74907"	"1468.74810"	"0.66"	"0.00048"	"9/96"	"9"	"96"	"19500241.2165527"	"HCD"	"MS2"	"0"	"278.0"	"36.430"	"72.1742"	"24315"	"24315"	"24298"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"245.5"	""	"225.1"	""	"257.2"	""	"565.7"	""	"673.4"	"689.2"	""	"734"	"70"	"35.000"	"28.000"	"4.04264926601699E-06"	"24"	"0"	"1.099E-05"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIISDTSGEFR"	"[K].dIISDTSGEFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"734.87823"	"1468.74919"	"1468.74810"	"0.74"	"0.00054"	"9/96"	"9"	"96"	"3146942.93023682"	"HCD"	"MS2"	"0"	"136.7"	"100.000"	"71.8766"	"24194"	"24194"	"24177"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"129.2"	""	"105.9"	""	"137.6"	""	"290.7"	"0.8"	"320.1"	"317.7"	""	"734"	"62"	"35.000"	"28.000"	"2.32095149455072E-05"	"20"	"0"	"1.054E-05"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIISDTSGEFR"	"[K].dIISDTSGEFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9420"	"0.0000"	"1"	"1"	"1"	"734.87848"	"1468.74968"	"1468.74810"	"1.07"	"0.00079"	"9/96"	"9"	"96"	"1372868.925354"	"HCD"	"MS2"	"0"	"64.3"	"100.000"	"72.4851"	"24442"	"24442"	"24425"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.3"	""	"51.9"	""	"59.3"	""	"126.2"	""	"158.3"	"152.7"	""	"737"	"69"	"35.000"	"28.000"	"4.2018204671629E-06"	"21"	"0"	"2.714E-06"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIISDTSGEFR"	"[K].dIISDTSGEFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"734.87860"	"1468.74993"	"1468.74810"	"1.24"	"0.00091"	"9/96"	"9"	"96"	"20474892.0115967"	"HCD"	"MS2"	"0"	"316.7"	"38.662"	"72.0134"	"24263"	"24263"	"24246"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"276.5"	""	"228.1"	""	"284.1"	""	"636.4"	"1.2"	"785.5"	"809.4"	""	"739"	"70"	"35.000"	"28.000"	"4.07957050053816E-06"	"21"	"0"	"3.053E-06"	"1.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVLNDELPGR"	"[R].ePVLnDELPGR.[I]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"734.89618"	"1468.78508"	"1468.78449"	"0.40"	"0.00030"	"6/104"	"6"	"104"	"185298.097839355"	"HCD"	"MS2"	"0"	"11.3"	"100.000"	"69.0788"	"23053"	"23053"	"23028"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.2"	""	"13.8"	""	"14.0"	""	"20.7"	""	"24.7"	"21.8"	""	"824"	"40"	"36.000"	"29.000"	"0.00398012962143803"	"19"	"0"	"0.003211"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPELALDTPR"	"[K].dLPELALDTPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JID1"	"Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2"	"Q9JID1"	"Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"734.91351"	"1468.81975"	"1468.82087"	"-0.77"	"-0.00056"	"6/96"	"6"	"96"	"376789.807312012"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"92.0474"	"32203"	"32203"	"32196"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.7"	""	"18.1"	""	"18.3"	""	"31.6"	""	"26.4"	"30.6"	""	"752"	"41"	"35.000"	"28.000"	"0.00272387920988196"	"20"	"0"	"0.001171"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPELALDTPR"	"[K].dLPELALDTPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JID1"	"Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2"	"Q9JID1"	"Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"734.91388"	"1468.82048"	"1468.82087"	"-0.27"	"-0.00020"	"6/96"	"6"	"96"	"193556.708007813"	"HCD"	"MS2"	"4.608063"	"8.7"	"100.000"	"92.3994"	"32348"	"32348"	"32336"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.4"	""	"11.2"	""	"12.0"	""	"14.7"	""	"18.9"	"15.3"	""	"741"	"39"	"35.000"	"28.000"	"0.0045059691323948"	"17"	"0.0003538"	"0.007368"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPELALDTPR"	"[K].dLPELALDTPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JID1"	"Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2"	"Q9JID1"	"Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"734.91412"	"1468.82097"	"1468.82087"	"0.07"	"0.00005"	"7/96"	"7"	"96"	"455419.73840332"	"HCD"	"MS2"	"0"	"19.8"	"100.000"	"92.1191"	"32238"	"32238"	"32223"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.3"	""	"27.3"	""	"24.8"	""	"37.0"	""	"35.8"	"36.0"	""	"742"	"60"	"35.000"	"28.000"	"4.09613167983669E-05"	"26"	"0"	"3.948E-05"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPELALDTPR"	"[K].dLPELALDTPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JID1"	"Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2"	"Q9JID1"	"Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"734.91437"	"1468.82146"	"1468.82087"	"0.40"	"0.00029"	"7/96"	"7"	"96"	"231513.485778809"	"HCD"	"MS2"	"4.711462"	"10.1"	"100.000"	"92.3329"	"32312"	"32312"	"32300"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.8"	""	"14.5"	""	"10.3"	""	"16.1"	""	"20.8"	"22.2"	""	"734"	"42"	"35.000"	"28.000"	"0.00250418300749993"	"17"	"0"	"0.002491"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEQHVVDGK"	"[K].vEQHVVDGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"490.28812"	"1468.84980"	"1468.85240"	"-1.77"	"-0.00087"	"7/86"	"7"	"86"	"4995588.13702393"	"HCD"	"MS2"	"32.79515"	"186.6"	"100.000"	"36.0341"	"9660"	"9660"	"9640"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"248.5"	""	"238.6"	""	"248.6"	""	"312.9"	""	"369.1"	"355.1"	""	"618"	"11"	"34.000"	"27.000"	"2.7413120771973"	"13"	"0.005369"	"0.06129"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEQHVVDGK"	"[K].vEQHVVDGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"490.28836"	"1468.85053"	"1468.85240"	"-1.27"	"-0.00062"	"5/86"	"5"	"86"	"6262248.11065674"	"HCD"	"MS2"	"38.70415"	"205.4"	"100.000"	"36.2121"	"9726"	"9726"	"9709"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"297.1"	""	"273.2"	""	"266.6"	""	"356.5"	""	"378.8"	"374.4"	""	"608"	"16"	"34.000"	"27.000"	"0.730926291202108"	"14"	"0.001374"	"0.01626"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSVESDIHGLR"	"[R].qSVESDIHGLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"3"	"3"	"0.9107"	"0.0000"	"1"	"1"	"1"	"490.60138"	"1469.78958"	"1469.79097"	"-0.94"	"-0.00046"	"8/108"	"8"	"108"	"5291717.0269165"	"HCD"	"MS2"	"66.34137"	"114.9"	"100.000"	"41.2447"	"11775"	"11775"	"11760"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"142.2"	""	"141.9"	""	"163.0"	""	"202.8"	""	"217.1"	"225.4"	""	"789"	"56"	"35.000"	"28.000"	"0.000103525421536516"	"21"	"0"	"2.167E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSVESDIHGLR"	"[R].qSVESDIHGLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"3"	"3"	"0.7869"	"0.0000"	"1"	"1"	"1"	"490.60153"	"1469.79004"	"1469.79097"	"-0.63"	"-0.00031"	"8/108"	"8"	"108"	"9371551.62145996"	"HCD"	"MS2"	"65.00423"	"199.0"	"100.000"	"41.4821"	"11862"	"11862"	"11848"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"276.0"	""	"252.3"	""	"276.4"	""	"311.3"	"9.2"	"374.2"	"386.9"	""	"784"	"61"	"35.000"	"28.000"	"2.81375362178374E-05"	""	"0"	"6.773E-06"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADPGDREVLR"	"[R].lADPGDREVLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6QBQ4"	"Phospholipid scramblase 3 OS=Rattus norvegicus OX=10116 GN=Plscr3 PE=2 SV=1"	"Q6QBQ4"	"Phospholipid scramblase 3 OS=Rattus norvegicus OX=10116 GN=Plscr3 PE=2 SV=1"	"1"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"490.61359"	"1469.82621"	"1469.82736"	"-0.78"	"-0.00038"	"8/98"	"8"	"98"	"3205344.59613037"	"HCD"	"MS2"	"31.166"	"92.9"	"100.000"	"45.4821"	"13497"	"13497"	"13477"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"138.0"	""	"135.7"	""	"130.5"	""	"144.3"	""	"166.4"	"166.1"	""	"749"	"20"	"35.000"	"28.000"	"0.369361667368889"	"24"	"0.0023"	"0.02392"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADPGDREVLR"	"[R].lADPGDREVLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6QBQ4"	"Phospholipid scramblase 3 OS=Rattus norvegicus OX=10116 GN=Plscr3 PE=2 SV=1"	"Q6QBQ4"	"Phospholipid scramblase 3 OS=Rattus norvegicus OX=10116 GN=Plscr3 PE=2 SV=1"	"1"	"3"	"3"	"0.4762"	"0.0000"	"1"	"1"	"1"	"490.61368"	"1469.82648"	"1469.82736"	"-0.60"	"-0.00029"	"9/98"	"9"	"98"	"2676988.55102539"	"HCD"	"MS2"	"28.38708"	"81.5"	"100.000"	"45.7330"	"13587"	"13587"	"13566"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"119.6"	""	"119.1"	""	"107.2"	""	"138.6"	""	"147.4"	"145.0"	""	"744"	"21"	"35.000"	"28.000"	"0.296171278355242"	"24"	"0.0006732"	"0.008941"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDTPGFYVDK"	"[M].aSDTPGFYVDk.[L]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q63184"	"Interferon-induced, double-stranded RNA-activated protein kinase OS=Rattus norvegicus OX=10116 GN=Eif2ak2 PE=1 SV=1"	"Q63184"	"Interferon-induced, double-stranded RNA-activated protein kinase OS=Rattus norvegicus OX=10116 GN=Eif2ak2 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"735.86932"	"1470.73137"	"1470.73139"	"-0.01"	"-0.00001"	"6/96"	"6"	"96"	"165033.335144043"	"HCD"	"MS2"	"15.31931"	"8.3"	"100.000"	"87.6969"	"30532"	"30532"	"30521"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.5"	""	"9.3"	""	"8.9"	""	"20.8"	""	"15.6"	"14.1"	""	"566"	"40"	"34.000"	"27.000"	"0.00276558133530494"	"21"	"0.000936"	"0.01238"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDTPGFYVDK"	"[M].aSDTPGFYVDk.[L]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q63184"	"Interferon-induced, double-stranded RNA-activated protein kinase OS=Rattus norvegicus OX=10116 GN=Eif2ak2 PE=1 SV=1"	"Q63184"	"Interferon-induced, double-stranded RNA-activated protein kinase OS=Rattus norvegicus OX=10116 GN=Eif2ak2 PE=1 SV=1"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"735.86987"	"1470.73247"	"1470.73139"	"0.73"	"0.00054"	"6/96"	"6"	"96"	"223092.950439453"	"HCD"	"MS2"	"10.94227"	"11.1"	"100.000"	"87.6880"	"30523"	"30523"	"30512"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.2"	""	"10.2"	""	"11.9"	""	"29.4"	""	"21.9"	"24.4"	""	"573"	"43"	"34.000"	"27.000"	"0.00144252924417735"	"22"	"0"	"0.0009259"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPAAAPATGNK"	"[R].dPAAAPATGNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.9434"	"0.0000"	"1"	"1"	"1"	"735.91870"	"1470.83013"	"1470.83166"	"-1.05"	"-0.00077"	"8/96"	"8"	"96"	"306929.068481445"	"HCD"	"MS2"	"0"	"23.7"	"100.000"	"34.8146"	"9164"	"9164"	"9144"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.8"	""	"18.7"	""	"32.7"	""	"41.9"	""	"53.1"	"55.0"	""	"731"	"53"	"35.000"	"28.000"	"0.000192259310865803"	"19"	"0"	"0.001569"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPAAAPATGNK"	"[R].dPAAAPATGNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.9219"	"0.0000"	"1"	"1"	"1"	"735.91907"	"1470.83086"	"1470.83166"	"-0.55"	"-0.00040"	"9/96"	"9"	"96"	"1569825.68804932"	"HCD"	"MS2"	"0"	"98.4"	"100.000"	"34.5018"	"9038"	"9038"	"9015"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"120.6"	""	"103.3"	""	"145.1"	""	"160.9"	"0.6"	"205.5"	"198.0"	""	"721"	"64"	"35.000"	"28.000"	"1.38964947938511E-05"	"21"	"0"	"1.596E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPAAAPATGNK"	"[R].dPAAAPATGNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"735.91968"	"1470.83208"	"1470.83166"	"0.28"	"0.00021"	"9/96"	"9"	"96"	"1475020.65600586"	"HCD"	"MS2"	"0"	"93.5"	"100.000"	"34.5975"	"9071"	"9071"	"9044"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"121.3"	""	"91.6"	""	"142.0"	""	"149.4"	"0.1"	"198.2"	"184.9"	""	"695"	"62"	"35.000"	"28.000"	"2.39858331834484E-05"	"18"	"0"	"0.000108"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEVEIEPGVR"	"[R].tLEVEIEPGVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6TUG0"	"DnaJ homolog subfamily B member 11 OS=Rattus norvegicus OX=10116 GN=Dnajb11 PE=2 SV=1"	"Q6TUG0"	"DnaJ homolog subfamily B member 11 OS=Rattus norvegicus OX=10116 GN=Dnajb11 PE=2 SV=1"	"0"	"2"	"2"	"0.8955"	"0.0000"	"1"	"1"	"1"	"735.92236"	"1470.83745"	"1470.83652"	"0.63"	"0.00046"	"9/92"	"9"	"92"	"456402.110717773"	"HCD"	"MS2"	"0"	"21.6"	"100.000"	"77.5892"	"26518"	"26518"	"26499"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.0"	""	"34.0"	""	"30.3"	""	"35.2"	""	"39.1"	"36.6"	""	"675"	"67"	"35.000"	"28.000"	"7.14946883146369E-06"	"24"	"0"	"3.194E-05"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEVEIEPGVR"	"[R].tLEVEIEPGVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6TUG0"	"DnaJ homolog subfamily B member 11 OS=Rattus norvegicus OX=10116 GN=Dnajb11 PE=2 SV=1"	"Q6TUG0"	"DnaJ homolog subfamily B member 11 OS=Rattus norvegicus OX=10116 GN=Dnajb11 PE=2 SV=1"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"735.92261"	"1470.83794"	"1470.83652"	"0.96"	"0.00071"	"7/92"	"7"	"92"	"443242.848449707"	"HCD"	"MS2"	"5.056716"	"24.4"	"100.000"	"77.6389"	"26528"	"26528"	"26509"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.6"	""	"37.1"	""	"42.3"	""	"32.6"	""	"39.7"	"35.9"	""	"675"	"55"	"35.000"	"28.000"	"0.000114887764024088"	"23"	"0"	"4.063E-05"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RIEDNLPAGEE"	"[R].rIEDNLPAGEE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U1Z2"	"Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1"	"Q5U1Z2"	"Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1"	"1"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"736.38324"	"1471.75920"	"1471.75900"	"0.14"	"0.00010"	"9/104"	"9"	"104"	"1911759.23352051"	"HCD"	"MS2"	"37.59884"	"74.0"	"100.000"	"49.4712"	"15110"	"15110"	"15089"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"122.0"	""	"87.4"	""	"93.9"	""	"155.0"	""	"106.0"	"136.4"	""	"758"	"24"	"35.000"	"28.000"	"0.135406405659581"	"16"	"0.0008629"	"0.009822"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RIEDNLPAGEE"	"[R].rIEDNLPAGEE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U1Z2"	"Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1"	"Q5U1Z2"	"Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1"	"1"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"736.38330"	"1471.75932"	"1471.75900"	"0.22"	"0.00016"	"9/104"	"9"	"104"	"2076715.87591553"	"HCD"	"MS2"	"40.74077"	"79.8"	"100.000"	"49.0396"	"14946"	"14946"	"14929"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"129.3"	""	"105.1"	""	"102.7"	""	"160.1"	""	"114.1"	"148.3"	""	"758"	"25"	"35.000"	"28.000"	"0.110570483830644"	"15"	"0.001134"	"0.01377"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSAFVEK"	"[R].eGmSAFVEk.[R]"	"N-Term(TMT6plex); M3(Oxidation); K9(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.6512"	"0.0000"	"1"	"1"	"1"	"736.39655"	"1471.78581"	"1471.78669"	"-0.59"	"-0.00044"	"8/78"	"8"	"78"	"973275.757080078"	"HCD"	"MS2"	"0"	"75.1"	"100.000"	"50.1545"	"15401"	"15401"	"15378"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"96.8"	""	"89.5"	""	"106.4"	""	"158.0"	""	"127.7"	"133.1"	""	"831"	"43"	"36.000"	"29.000"	"0.00221600649075107"	""	"0.002547"	"0.02516"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSAFVEK"	"[R].eGmSAFVEk.[R]"	"N-Term(TMT6plex); M3(Oxidation); K9(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"736.39722"	"1471.78716"	"1471.78669"	"0.32"	"0.00023"	"8/78"	"8"	"78"	"929804.558105469"	"HCD"	"MS2"	"3.336986"	"72.0"	"100.000"	"50.4870"	"15525"	"15525"	"15502"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.9"	""	"90.1"	""	"100.2"	""	"161.0"	""	"121.0"	"121.7"	""	"838"	"43"	"36.000"	"29.000"	"0.00226054950833839"	"21"	"0.005119"	"0.05796"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIGIPDATGR"	"[R].eVDIGIPDATGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"736.39899"	"1471.79070"	"1471.79539"	"-3.19"	"-0.00235"	"10/106"	"10"	"106"	"1419329.3737793"	"HCD"	"MS2"	"9.239462"	"55.8"	"100.000"	"76.8787"	"26229"	"26229"	"26211"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.5"	""	"78.6"	""	"77.1"	""	"89.0"	"1.5"	"99.1"	"91.2"	""	"815"	"43"	"36.000"	"29.000"	"0.00221884831033287"	"26"	"0"	"0.0001074"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIGIPDATGR"	"[R].eVDIGIPDATGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"491.26892"	"1471.79221"	"1471.79539"	"-2.16"	"-0.00106"	"13/106"	"13"	"106"	"1536688.41802979"	"HCD"	"MS2"	"14.61177"	"21.8"	"100.000"	"77.1023"	"26320"	"26320"	"26301"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.3"	""	"31.1"	""	"28.8"	""	"30.6"	""	"46.0"	"43.1"	""	"833"	"36"	"36.000"	"29.000"	"0.0103422493835561"	"21"	"0"	"0.0005252"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIGIPDATGR"	"[R].eVDIGIPDATGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"491.26913"	"1471.79285"	"1471.79539"	"-1.72"	"-0.00085"	"14/106"	"14"	"106"	"1463797.75201416"	"HCD"	"MS2"	"21.07095"	"21.2"	"100.000"	"77.1545"	"26331"	"26331"	"26314"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.5"	""	"25.3"	""	"31.6"	""	"33.3"	""	"42.0"	"44.0"	""	"832"	"38"	"36.000"	"29.000"	"0.00597163604275121"	"19"	"0"	"0.0005236"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIGIPDATGR"	"[R].eVDIGIPDATGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"736.40051"	"1471.79375"	"1471.79539"	"-1.11"	"-0.00082"	"10/106"	"10"	"106"	"658628.444641113"	"HCD"	"MS2"	"13.22946"	"31.5"	"100.000"	"77.4691"	"26469"	"26469"	"26451"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.1"	""	"44.1"	""	"55.5"	""	"45.5"	"0.8"	"55.6"	"46.5"	""	"862"	"28"	"36.000"	"29.000"	"0.0650844546444747"	"28"	"0"	"0.00113"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIGIPDATGR"	"[R].eVDIGIPDATGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"736.40057"	"1471.79387"	"1471.79539"	"-1.03"	"-0.00076"	"7/106"	"7"	"106"	"1807646.61828613"	"HCD"	"MS2"	"2.369957"	"71.5"	"100.000"	"76.9957"	"26267"	"26267"	"26249"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"114.1"	""	"98.4"	""	"102.2"	""	"121.4"	"1.1"	"123.4"	"116.0"	""	"860"	"43"	"36.000"	"29.000"	"0.0021304358204606"	"27"	"0"	"0.000135"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIGIPDATGR"	"[R].eVDIGIPDATGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7551"	"0.0000"	"1"	"1"	"1"	"736.40070"	"1471.79411"	"1471.79539"	"-0.87"	"-0.00064"	"18/106"	"18"	"106"	"5615614.56420898"	"HCD"	"MS2"	"0"	"203.8"	"100.000"	"77.1761"	"26350"	"26350"	"26333"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"321.8"	""	"261.8"	""	"285.6"	""	"322.0"	"2.1"	"384.3"	"352.2"	""	"859"	"49"	"36.000"	"29.000"	"0.000509287677337795"	"27"	"0"	"0.0001165"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIGIPDATGR"	"[R].eVDIGIPDATGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"491.26959"	"1471.79422"	"1471.79539"	"-0.79"	"-0.00039"	"11/106"	"11"	"106"	"405728.264282227"	"HCD"	"MS2"	"13.44664"	"11.7"	"100.000"	"77.4544"	"26453"	"26453"	"26429"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.6"	""	"15.6"	""	"15.7"	""	"16.4"	""	"22.7"	"26.3"	""	"859"	"24"	"36.000"	"29.000"	"0.185337443497525"	"16"	"0"	"0.002818"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIGIPDATGR"	"[R].eVDIGIPDATGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"736.40192"	"1471.79656"	"1471.79539"	"0.79"	"0.00058"	"10/106"	"10"	"106"	"5011029.64526367"	"HCD"	"MS2"	"0"	"178.3"	"100.000"	"77.2906"	"26386"	"26386"	"26368"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"278.9"	""	"228.4"	""	"249.1"	""	"284.5"	"1.1"	"329.7"	"316.4"	""	"854"	"57"	"36.000"	"29.000"	"7.68117880759993E-05"	"28"	"0"	"1.416E-06"	"1.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGGGGVGGPGAK"	"[K].eAGGGGVGGPGAk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6AXS5"	"Plasminogen activator inhibitor 1 RNA-binding protein OS=Rattus norvegicus OX=10116 GN=Serbp1 PE=1 SV=2"	"Q6AXS5"	"Plasminogen activator inhibitor 1 RNA-binding protein OS=Rattus norvegicus OX=10116 GN=Serbp1 PE=1 SV=2"	"0"	"2"	"2"	"0.7945"	"0.0000"	"1"	"1"	"1"	"736.41718"	"1471.82707"	"1471.82691"	"0.11"	"0.00008"	"11/96"	"11"	"96"	"623040.096618652"	"HCD"	"MS2"	"0"	"49.4"	"100.000"	"32.0427"	"8036"	"8036"	"8006"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"89.3"	""	"89.5"	""	"87.6"	""	"68.6"	""	"64.2"	"67.2"	""	"789"	"73"	"35.000"	"28.000"	"2.07992180331303E-06"	""	"0"	"1.264E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGGGGVGGPGAK"	"[K].eAGGGGVGGPGAk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6AXS5"	"Plasminogen activator inhibitor 1 RNA-binding protein OS=Rattus norvegicus OX=10116 GN=Serbp1 PE=1 SV=2"	"Q6AXS5"	"Plasminogen activator inhibitor 1 RNA-binding protein OS=Rattus norvegicus OX=10116 GN=Serbp1 PE=1 SV=2"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"736.41779"	"1471.82829"	"1471.82691"	"0.94"	"0.00069"	"14/96"	"14"	"96"	"391786.967590332"	"HCD"	"MS2"	"0"	"31.2"	"100.000"	"31.9641"	"8012"	"8012"	"7992"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.9"	""	"60.6"	""	"53.5"	""	"45.8"	""	"52.8"	"33.9"	""	"796"	"31"	"35.000"	"29.000"	"0.0309658547313842"	"17"	"0"	"0.0002043"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVQVALETAQR"	"[R].qVQVALETAQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"736.42517"	"1471.84307"	"1471.84301"	"0.04"	"0.00003"	"6/102"	"6"	"102"	"172636.418640137"	"HCD"	"MS2"	"0"	"14.6"	"100.000"	"53.7585"	"16871"	"16871"	"16844"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.4"	""	"13.5"	""	"19.3"	""	"25.5"	"0.9"	"32.9"	"29.1"	""	"750"	"11"	"35.000"	"28.000"	"3.17710280302724"	"22"	"0.009239"	"0.1205"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDYLNAESR"	"[K].fEDYLNAESR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"736.86389"	"1472.72051"	"1472.72189"	"-0.94"	"-0.00069"	"9/94"	"9"	"94"	"2505973.86804199"	"HCD"	"MS2"	"4.200709"	"153.6"	"100.000"	"79.0067"	"27084"	"27084"	"27071"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"240.9"	""	"175.7"	""	"198.9"	""	"286.8"	""	"265.4"	"289.3"	""	"483"	"41"	"33.000"	"26.000"	"0.00212283937814658"	"21"	"0"	"0.0001616"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDYLNAESR"	"[K].fEDYLNAESR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"736.86401"	"1472.72075"	"1472.72189"	"-0.77"	"-0.00057"	"9/94"	"9"	"94"	"1201125.53045654"	"HCD"	"MS2"	"0"	"74.3"	"100.000"	"79.2924"	"27195"	"27195"	"27185"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"113.7"	""	"82.8"	""	"93.4"	""	"135.7"	"0.2"	"134.5"	"143.5"	""	"483"	"47"	"33.000"	"26.000"	"0.000521095274810369"	"21"	"0"	"2.781E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDYLNAESR"	"[K].fEDYLNAESR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"736.86414"	"1472.72099"	"1472.72189"	"-0.61"	"-0.00045"	"8/94"	"8"	"94"	"2344656.96142578"	"HCD"	"MS2"	"0"	"142.0"	"100.000"	"79.0089"	"27081"	"27081"	"27068"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"240.4"	""	"162.1"	""	"177.7"	""	"259.6"	""	"237.9"	"266.8"	""	"488"	"39"	"33.000"	"26.000"	"0.00336813760563103"	"19"	"0"	"7.755E-05"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDYLNAESR"	"[K].fEDYLNAESR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"736.86426"	"1472.72124"	"1472.72189"	"-0.44"	"-0.00032"	"9/94"	"9"	"94"	"1053928.0826416"	"HCD"	"MS2"	"1.132055"	"59.4"	"100.000"	"79.2878"	"27198"	"27198"	"27182"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"83.8"	""	"69.8"	""	"68.5"	""	"100.3"	""	"121.8"	"120.6"	""	"489"	"45"	"33.000"	"26.000"	"0.000760814644422421"	"20"	"0"	"5.01E-05"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEYMEGGNK"	"[R].sEYMEGGNk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.87555"	"1472.74382"	"1472.74555"	"-1.17"	"-0.00086"	"4/74"	"4"	"74"	"215040.543212891"	"HCD"	"MS2"	"0"	"20.7"	"100.000"	"40.3077"	"11396"	"11396"	"11368"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.6"	""	"25.4"	""	"29.2"	""	"30.9"	""	"35.3"	"43.9"	""	"614"	"8"	"34.000"	"27.000"	"5.4092664624837"	"13"	"0.006739"	"0.07602"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNDAFGDTK"	"[R].mNDAFGDTk.[F]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"736.87573"	"1472.74419"	"1472.74555"	"-0.93"	"-0.00068"	"8/88"	"8"	"88"	"803865.907165527"	"HCD"	"MS2"	"0"	"62.4"	"100.000"	"43.1675"	"12550"	"12550"	"12524"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.5"	""	"61.8"	""	"71.4"	""	"173.8"	"0.7"	"108.7"	"106.0"	""	"614"	"32"	"34.000"	"27.000"	"0.0182868278063406"	"19"	"0.006308"	"0.0717"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNDAFGDTK"	"[R].mNDAFGDTk.[F]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"736.87604"	"1472.74480"	"1472.74555"	"-0.51"	"-0.00038"	"8/88"	"8"	"88"	"1107651.18579102"	"HCD"	"MS2"	"3.652378"	"82.5"	"100.000"	"42.9971"	"12491"	"12491"	"12467"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.0"	""	"81.5"	""	"102.8"	""	"235.8"	""	"147.7"	"128.8"	""	"611"	"34"	"34.000"	"27.000"	"0.0127941434143524"	"19"	"0.007339"	"0.08408"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQLVEEELDR"	"[R].iQLVEEELDR.[A]"	"N-Term(TMT6plex)"	"4"	"4"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2;Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"736.91144"	"1472.81560"	"1472.81579"	"-0.13"	"-0.00009"	"6/96"	"6"	"96"	"122958.223815918"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"100.9333"	"35279"	"35279"	"35271"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.4"	""	"3.2"	""	"4.6"	""	"14.3"	""	"11.2"	"12.9"	""	"824"	"35"	"36.000"	"29.000"	"0.0130887211710771"	"29"	"0"	"0.002691"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQLVEEELDR"	"[R].iQLVEEELDR.[A]"	"N-Term(TMT6plex)"	"4"	"4"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2;Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.4915"	"0.0000"	"1"	"1"	"1"	"736.91144"	"1472.81560"	"1472.81579"	"-0.13"	"-0.00009"	"7/96"	"7"	"96"	"546216.456298828"	"HCD"	"MS2"	"1.058817"	"26.3"	"100.000"	"101.2033"	"35364"	"35364"	"35356"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.2"	""	"23.2"	""	"30.8"	""	"55.2"	""	"58.1"	"52.3"	""	"824"	"59"	"36.000"	"29.000"	"5.16294164075863E-05"	""	"0"	"6.211E-05"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQLVEEELDR"	"[R].iQLVEEELDR.[A]"	"N-Term(TMT6plex)"	"4"	"4"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2;Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.4909"	"0.0000"	"1"	"1"	"1"	"736.91150"	"1472.81572"	"1472.81579"	"-0.05"	"-0.00003"	"7/96"	"7"	"96"	"729371.202514648"	"HCD"	"MS2"	"0"	"36.1"	"100.000"	"101.1187"	"35383"	"35383"	"35378"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.8"	""	"30.4"	""	"44.9"	""	"71.1"	"0.7"	"74.3"	"77.9"	""	"824"	"55"	"36.000"	"29.000"	"0.000117461952621161"	""	"0"	"6.244E-05"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQLVEEELDR"	"[R].iQLVEEELDR.[A]"	"N-Term(TMT6plex)"	"4"	"4"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2;Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"736.91168"	"1472.81609"	"1472.81579"	"0.20"	"0.00015"	"6/96"	"6"	"96"	"116711.254638672"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"101.4708"	"35451"	"35451"	"35447"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.6"	""	"4.7"	""	"4.9"	""	"11.0"	""	"10.7"	"10.1"	""	"822"	"44"	"36.000"	"29.000"	"0.00180651603944946"	""	"0.0003538"	"0.0073"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQLVEEELDR"	"[R].iQLVEEELDR.[A]"	"N-Term(TMT6plex)"	"4"	"4"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2;Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"736.91193"	"1472.81658"	"1472.81579"	"0.53"	"0.00039"	"7/96"	"7"	"96"	"204642.827148438"	"HCD"	"MS2"	"0"	"10.0"	"100.000"	"101.3812"	"35468"	"35468"	"35462"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.5"	""	"10.7"	""	"8.4"	""	"19.9"	""	"24.8"	"21.5"	""	"828"	"55"	"36.000"	"29.000"	"0.000127350408130265"	""	"0"	"0.000235"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQLVEEELDR"	"[R].iQLVEEELDR.[A]"	"N-Term(TMT6plex)"	"4"	"4"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2;Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"736.91284"	"1472.81841"	"1472.81579"	"1.78"	"0.00131"	"5/96"	"5"	"96"	"115295.478942871"	"HCD"	"MS2"	"14.77856"	"6.7"	"100.000"	"100.8598"	"35301"	"35301"	"35293"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.9"	""	"8.3"	""	"7.9"	""	"12.3"	""	"14.4"	"14.7"	""	"833"	"10"	"36.000"	"29.000"	"4.23267580580645"	"19"	"0.009594"	"0.1262"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVPSTAEGK"	"[K].ePVPSTAEGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"491.61646"	"1472.83481"	"1472.83608"	"-0.86"	"-0.00042"	"11/86"	"11"	"86"	"5409126.54736328"	"HCD"	"MS2"	"25.07197"	"162.6"	"100.000"	"41.9483"	"12062"	"12062"	"12044"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"185.1"	""	"190.9"	""	"212.8"	""	"285.1"	"2.5"	"322.0"	"345.2"	""	"869"	"44"	"36.000"	"29.000"	"0.00172977565605495"	"21"	"0"	"0.0004483"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVPSTAEGK"	"[K].ePVPSTAEGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"736.92114"	"1472.83501"	"1472.83608"	"-0.73"	"-0.00054"	"7/86"	"7"	"86"	"704816.49621582"	"HCD"	"MS2"	"0"	"45.0"	"100.000"	"42.1530"	"12146"	"12146"	"12124"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.2"	""	"46.8"	""	"59.9"	""	"79.4"	"0.7"	"98.0"	"94.9"	""	"869"	"55"	"36.000"	"29.000"	"0.000126762203758351"	""	"0"	"0.001206"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNALDEK"	"[R].dLPNALDEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"3"	"736.92126"	"1472.83525"	"1472.83608"	"-0.56"	"-0.00041"	"5/88"	"5"	"88"	"302925.791748047"	"HCD"	"MS2"	"0"	"22.8"	"100.000"	"71.1851"	"23912"	"23912"	"23893"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.3"	""	"29.1"	""	"29.2"	""	"35.5"	""	"42.7"	"43.0"	""	"869"	"18"	"36.000"	"29.000"	"0.685472096684367"	"14"	"0.008668"	"0.1102"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNALDEK"	"[R].dLPNALDEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"2"	"2"	"0.8431"	"0.0000"	"1"	"1"	"1"	"736.92139"	"1472.83550"	"1472.83608"	"-0.40"	"-0.00029"	"8/88"	"8"	"88"	"1901603.95776367"	"HCD"	"MS2"	"4.32947"	"131.7"	"100.000"	"70.7120"	"23733"	"23733"	"23717"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"222.6"	""	"141.0"	""	"163.8"	""	"218.8"	""	"258.3"	"246.4"	""	"850"	"51"	"36.000"	"29.000"	"0.000325378557937285"	"23"	"0"	"0.0001838"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVPSTAEGK"	"[K].ePVPSTAEGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"736.92139"	"1472.83550"	"1472.83608"	"-0.40"	"-0.00029"	"7/86"	"7"	"86"	"7653164.47247314"	"HCD"	"MS2"	"0"	"389.6"	"100.000"	"42.0245"	"12083"	"12083"	"12065"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"466.6"	""	"432.5"	""	"433.1"	""	"672.0"	""	"819.9"	"884.2"	""	"850"	"55"	"36.000"	"29.000"	"0.000122289432626266"	""	"0"	"4.37E-05"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVPSTAEGK"	"[K].ePVPSTAEGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"736.92145"	"1472.83562"	"1472.83608"	"-0.31"	"-0.00023"	"7/86"	"7"	"86"	"10068036.9702759"	"HCD"	"MS2"	"0"	"394.8"	"82.740"	"41.8377"	"12017"	"12017"	"12001"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"486.7"	""	"421.7"	""	"468.6"	""	"676.3"	""	"838.4"	"863.3"	""	"850"	"52"	"36.000"	"29.000"	"0.000239546003726031"	""	"0"	"0.0001221"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNALDEK"	"[R].dLPNALDEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"736.92163"	"1472.83599"	"1472.83608"	"-0.06"	"-0.00005"	"13/88"	"13"	"88"	"306158.47857666"	"HCD"	"MS2"	"0"	"23.4"	"100.000"	"71.0706"	"23879"	"23879"	"23857"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.8"	""	"29.0"	""	"33.7"	""	"40.1"	""	"38.9"	"44.7"	""	"850"	"29"	"36.000"	"29.000"	"0.0524069554122287"	"21"	"0.004942"	"0.05357"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVPSTAEGK"	"[K].ePVPSTAEGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7292"	"0.0000"	"1"	"1"	"1"	"736.92169"	"1472.83611"	"1472.83608"	"0.02"	"0.00001"	"9/86"	"9"	"86"	"6809995.57922363"	"HCD"	"MS2"	"0"	"342.1"	"100.000"	"41.5344"	"11893"	"11893"	"11876"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"441.4"	""	"418.6"	""	"389.9"	""	"623.1"	""	"688.5"	"687.4"	""	"850"	"48"	"36.000"	"29.000"	"0.000700469016398342"	"29"	"0"	"0.0001527"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVPSTAEGK"	"[K].ePVPSTAEGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"736.92175"	"1472.83623"	"1472.83608"	"0.10"	"0.00007"	"9/86"	"9"	"86"	"638454.406005859"	"HCD"	"MS2"	"0"	"43.1"	"100.000"	"42.3280"	"12207"	"12207"	"12187"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.2"	""	"47.7"	""	"47.2"	""	"74.8"	""	"99.3"	"88.5"	""	"823"	"47"	"36.000"	"29.000"	"0.000787716313146177"	"25"	"0"	"0.001374"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNALDEK"	"[R].dLPNALDEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"736.92194"	"1472.83660"	"1472.83608"	"0.35"	"0.00026"	"14/88"	"14"	"88"	"1898705.99389648"	"HCD"	"MS2"	"4.129689"	"132.4"	"100.000"	"70.8701"	"23783"	"23783"	"23765"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"229.1"	"3.2"	"143.5"	""	"161.4"	""	"232.4"	""	"236.9"	"250.0"	""	"822"	"47"	"36.000"	"29.000"	"0.000747897052888703"	"23"	"0"	"0.0002162"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVPSTAEGK"	"[K].ePVPSTAEGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"736.92194"	"1472.83660"	"1472.83608"	"0.35"	"0.00026"	"7/86"	"7"	"86"	"7828817.26641846"	"HCD"	"MS2"	"0"	"390.6"	"100.000"	"41.7209"	"11959"	"11959"	"11938"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"494.6"	""	"459.9"	""	"432.7"	""	"701.3"	"5.5"	"812.1"	"803.6"	""	"822"	"55"	"36.000"	"29.000"	"0.000117176850794411"	""	"0"	"3.967E-05"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVPSTAEGK"	"[K].ePVPSTAEGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"491.61713"	"1472.83683"	"1472.83608"	"0.51"	"0.00025"	"11/86"	"11"	"86"	"7458439.44732666"	"HCD"	"MS2"	"23.983"	"214.2"	"100.000"	"42.0660"	"12100"	"12100"	"12081"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"246.9"	""	"259.0"	""	"248.5"	""	"362.2"	""	"449.6"	"470.6"	""	"822"	"44"	"36.000"	"29.000"	"0.00147177635649183"	"21"	"0"	"0.0002867"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.61853"	"1472.84104"	"1472.84228"	"-0.84"	"-0.00041"	"13/96"	"13"	"96"	"987524.499572754"	"HCD"	"MS2"	"13.65637"	"25.6"	"100.000"	"55.9191"	"17749"	"17749"	"17729"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.4"	""	"25.6"	""	"32.9"	""	"61.7"	"1.3"	"42.8"	"51.0"	""	"804"	"39"	"36.000"	"29.000"	"0.00546042005528036"	"15"	"0"	"0.0001504"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.61856"	"1472.84113"	"1472.84228"	"-0.78"	"-0.00038"	"13/96"	"13"	"96"	"3595579.82537842"	"HCD"	"MS2"	"22.21273"	"33.7"	"100.000"	"55.3177"	"17504"	"17504"	"17479"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.0"	""	"41.8"	""	"45.6"	""	"64.0"	""	"65.7"	"65.0"	""	"804"	"40"	"36.000"	"29.000"	"0.00365785135598165"	"15"	"0"	"4.829E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.61871"	"1472.84159"	"1472.84228"	"-0.47"	"-0.00023"	"13/96"	"13"	"96"	"4150705.71368408"	"HCD"	"MS2"	"4.880201"	"42.4"	"100.000"	"55.5641"	"17590"	"17590"	"17570"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.0"	""	"52.0"	""	"54.7"	""	"74.6"	"0.4"	"88.2"	"89.7"	""	"801"	"39"	"36.000"	"29.000"	"0.00458777933048937"	"15"	"0"	"0.0001241"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.61874"	"1472.84168"	"1472.84228"	"-0.41"	"-0.00020"	"14/96"	"14"	"96"	"6794400.14782715"	"HCD"	"MS2"	"3.775702"	"51.5"	"100.000"	"55.8657"	"17714"	"17714"	"17697"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.7"	""	"60.9"	""	"67.8"	""	"86.5"	""	"106.8"	"104.2"	""	"801"	"48"	"36.000"	"29.000"	"0.000602008357419054"	"16"	"0"	"1.033E-05"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"736.92456"	"1472.84184"	"1472.84228"	"-0.29"	"-0.00022"	"9/96"	"9"	"96"	"1162405.45562744"	"HCD"	"MS2"	"0"	"47.7"	"100.000"	"56.0591"	"17792"	"17792"	"17773"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.7"	""	"56.9"	""	"66.8"	""	"79.1"	"1.1"	"96.2"	"94.9"	""	"801"	"43"	"36.000"	"29.000"	"0.00186897081815872"	"20"	"0"	"5.035E-05"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"736.92462"	"1472.84197"	"1472.84228"	"-0.21"	"-0.00016"	"11/96"	"11"	"96"	"8353096.64672852"	"HCD"	"MS2"	"0.7799433"	"264.9"	"99.896"	"55.7505"	"17667"	"17667"	"17650"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"321.3"	""	"320.0"	""	"347.3"	""	"458.4"	""	"547.2"	"521.7"	""	"801"	"46"	"36.000"	"29.000"	"0.00102471364770571"	"19"	"0"	"0.0001023"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"2"	"2"	"0.9298"	"0.0000"	"1"	"1"	"1"	"736.92468"	"1472.84209"	"1472.84228"	"-0.13"	"-0.00010"	"11/96"	"11"	"96"	"8373919.99127197"	"HCD"	"MS2"	"0.9853156"	"256.9"	"100.000"	"55.5667"	"17606"	"17606"	"17589"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"312.4"	""	"306.2"	""	"332.2"	""	"457.4"	""	"505.3"	"527.3"	""	"803"	"57"	"36.000"	"29.000"	"8.21647521644957E-05"	"20"	"0"	"1.852E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.61890"	"1472.84214"	"1472.84228"	"-0.10"	"-0.00005"	"14/96"	"14"	"96"	"8666217.86956787"	"HCD"	"MS2"	"2.801522"	"64.1"	"100.000"	"55.6058"	"17622"	"17622"	"17605"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.7"	""	"79.0"	""	"84.8"	""	"110.6"	""	"128.2"	"131.7"	""	"803"	"48"	"36.000"	"29.000"	"0.000602123461454203"	"16"	"0"	"7.652E-06"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"736.92480"	"1472.84233"	"1472.84228"	"0.04"	"0.00003"	"10/96"	"10"	"96"	"1010485.78326416"	"HCD"	"MS2"	"2.638018"	"42.7"	"100.000"	"55.8774"	"17732"	"17732"	"17713"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.3"	""	"51.6"	""	"54.8"	""	"82.1"	"0.8"	"86.3"	"76.5"	""	"803"	"39"	"36.000"	"29.000"	"0.00490552563556196"	"19"	"0"	"0.0008354"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"736.92480"	"1472.84233"	"1472.84228"	"0.04"	"0.00003"	"10/96"	"10"	"96"	"1641264.0793457"	"HCD"	"MS2"	"34.50284"	"62.5"	"100.000"	"55.2739"	"17486"	"17486"	"17463"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.8"	""	"77.0"	""	"81.8"	""	"110.1"	"1.2"	"132.2"	"112.3"	""	"803"	"36"	"36.000"	"29.000"	"0.0107321207307832"	"18"	"0"	"2.745E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"736.92487"	"1472.84245"	"1472.84228"	"0.12"	"0.00009"	"16/96"	"16"	"96"	"1094980.27197266"	"HCD"	"MS2"	"53.27064"	"43.9"	"100.000"	"55.4580"	"17547"	"17547"	"17527"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.7"	""	"56.3"	""	"57.9"	""	"81.7"	"1.4"	"84.7"	"85.2"	""	"803"	"36"	"36.000"	"29.000"	"0.0104878278379128"	"18"	"0"	"0.0001182"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"736.93085"	"1472.85442"	"1472.85471"	"-0.20"	"-0.00014"	"8/72"	"8"	"72"	"793042.728149414"	"HCD"	"MS2"	"0"	"47.0"	"100.000"	"48.8798"	"14869"	"14869"	"14840"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.6"	""	"67.9"	""	"52.3"	""	"110.1"	""	"71.9"	"75.8"	""	"840"	"46"	"36.000"	"29.000"	"0.00103097774458771"	"25"	"0"	"0.001449"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"736.93097"	"1472.85466"	"1472.85471"	"-0.03"	"-0.00002"	"8/72"	"8"	"72"	"810325.716247559"	"HCD"	"MS2"	"6.11501"	"48.7"	"100.000"	"48.4553"	"14708"	"14708"	"14690"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.9"	""	"74.0"	""	"64.2"	""	"111.7"	""	"72.2"	"68.4"	""	"840"	"41"	"36.000"	"29.000"	"0.00349340783863122"	"24"	"0"	"0.001472"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDYLNAESR"	"[K].fEDYLnAESR.[V]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"737.35675"	"1473.70622"	"1473.70590"	"0.22"	"0.00016"	"8/94"	"8"	"94"	"94152.9112548828"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"83.1386"	"28740"	"28740"	"28721"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.5"	""	"5.9"	""	"6.0"	""	"10.6"	""	"11.6"	"14.5"	""	"400"	"10"	"33.000"	"26.000"	"1.79899516306007"	"13"	"0.007339"	"0.08412"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDGDYDYLIK"	"[M].tDGDYDYLIk.[L]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q99P74"	"Ras-related protein Rab-27B OS=Rattus norvegicus OX=10116 GN=Rab27b PE=2 SV=3"	"Q99P74"	"Ras-related protein Rab-27B OS=Rattus norvegicus OX=10116 GN=Rab27b PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"737.36847"	"1473.72966"	"1473.73106"	"-0.95"	"-0.00070"	"5/82"	"5"	"82"	"116406.437866211"	"HCD"	"MS2"	"23.49516"	"4.1"	"100.000"	"104.6940"	"36446"	"36446"	"36440"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.2"	""	"5.5"	""	"5.4"	""	"8.6"	""	"10.0"	"6.3"	""	"547"	"32"	"34.000"	"27.000"	"0.0175775090686205"	"14"	"0.003717"	"0.03823"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDGDYDYLIK"	"[M].tDGDYDYLIk.[L]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q99P74"	"Ras-related protein Rab-27B OS=Rattus norvegicus OX=10116 GN=Rab27b PE=2 SV=3"	"Q99P74"	"Ras-related protein Rab-27B OS=Rattus norvegicus OX=10116 GN=Rab27b PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"737.36896"	"1473.73064"	"1473.73106"	"-0.28"	"-0.00021"	"5/82"	"5"	"82"	"123611.505615234"	"HCD"	"MS2"	"23.43515"	"5.7"	"100.000"	"104.9943"	"36477"	"36477"	"36471"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.0"	""	"4.3"	""	"9.8"	""	"9.9"	""	"10.9"	"12.3"	""	"555"	"28"	"34.000"	"27.000"	"0.0420981476969966"	"14"	"0.002711"	"0.02625"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDGDYDYLIK"	"[M].tDGDYDYLIk.[L]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q99P74"	"Ras-related protein Rab-27B OS=Rattus norvegicus OX=10116 GN=Rab27b PE=2 SV=3"	"Q99P74"	"Ras-related protein Rab-27B OS=Rattus norvegicus OX=10116 GN=Rab27b PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"737.36902"	"1473.73076"	"1473.73106"	"-0.20"	"-0.00015"	"4/82"	"4"	"82"	"93854.321105957"	"HCD"	"MS2"	"17.42289"	"4.5"	"100.000"	"104.7325"	"36394"	"36394"	"36389"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.0"	""	"6.4"	""	"6.2"	""	"6.8"	""	"10.3"	"7.6"	""	"555"	"20"	"34.000"	"27.000"	"0.282009012271618"	"14"	"0.004069"	"0.04445"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDGDYDYLIK"	"[M].tDGDYDYLIk.[L]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q99P74"	"Ras-related protein Rab-27B OS=Rattus norvegicus OX=10116 GN=Rab27b PE=2 SV=3"	"Q99P74"	"Ras-related protein Rab-27B OS=Rattus norvegicus OX=10116 GN=Rab27b PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"737.36920"	"1473.73113"	"1473.73106"	"0.05"	"0.00003"	"5/82"	"5"	"82"	"161308.179321289"	"HCD"	"MS2"	"28.80196"	"6.7"	"100.000"	"104.9497"	"36532"	"36532"	"36528"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.9"	""	"6.8"	""	"6.1"	""	"13.2"	""	"16.4"	"14.7"	""	"554"	"27"	"34.000"	"27.000"	"0.0508721121107492"	"14"	"0.0001301"	"0.003971"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNQELQEINR"	"[R].tNQELQEINR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"737.39575"	"1473.78423"	"1473.78589"	"-1.13"	"-0.00083"	"8/100"	"8"	"100"	"2521135.47033691"	"HCD"	"MS2"	"10.73642"	"137.1"	"100.000"	"41.3396"	"11804"	"11804"	"11789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"235.0"	""	"141.7"	""	"156.4"	""	"250.6"	""	"251.9"	"263.7"	""	"842"	"51"	"36.000"	"29.000"	"0.000319361159087286"	""	"0"	"0.0001076"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNQELQEINR"	"[R].tNQELQEINR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6939"	"0.0000"	"1"	"1"	"1"	"737.39594"	"1473.78459"	"1473.78589"	"-0.88"	"-0.00065"	"9/100"	"9"	"100"	"2467211.81054688"	"HCD"	"MS2"	"8.504783"	"136.1"	"100.000"	"41.1623"	"11742"	"11742"	"11722"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"231.6"	""	"140.2"	""	"157.2"	""	"251.0"	""	"239.0"	"271.5"	""	"842"	"49"	"36.000"	"29.000"	"0.000501512885379524"	""	"0"	"0.0001801"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQGEPQVQFK"	"[M].aAQGEPQVQFk.[L]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"0.3704"	"0.0000"	"1"	"1"	"1"	"491.93436"	"1473.78852"	"1473.78991"	"-0.94"	"-0.00046"	"5/96"	"5"	"96"	"820436.127075195"	"HCD"	"MS2"	"15.49148"	"25.6"	"100.000"	"72.4734"	"24437"	"24437"	"24409"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.8"	""	"34.8"	""	"38.8"	""	"44.9"	""	"40.7"	"40.0"	""	"847"	"27"	"36.000"	"29.000"	"0.0801407522496147"	""	"0"	"0.002134"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQGEPQVQFK"	"[M].aAQGEPQVQFk.[L]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"0.4688"	"0.0000"	"1"	"1"	"1"	"491.93448"	"1473.78888"	"1473.78991"	"-0.70"	"-0.00034"	"5/96"	"5"	"96"	"2051770.18621826"	"HCD"	"MS2"	"7.929971"	"48.3"	"100.000"	"72.7870"	"24564"	"24564"	"24546"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.7"	""	"54.9"	""	"66.7"	""	"84.8"	""	"85.4"	"81.2"	""	"836"	"32"	"36.000"	"29.000"	"0.0279367757543681"	""	"0"	"0.003067"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQGEPQVQFK"	"[M].aAQGEPQVQFk.[L]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"0.4815"	"0.0000"	"1"	"1"	"1"	"491.93448"	"1473.78888"	"1473.78991"	"-0.70"	"-0.00034"	"5/96"	"5"	"96"	"2218450.7901001"	"HCD"	"MS2"	"10.15753"	"56.1"	"100.000"	"72.6289"	"24514"	"24514"	"24497"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"104.8"	""	"81.4"	""	"68.8"	""	"97.9"	""	"97.8"	"82.0"	""	"836"	"27"	"36.000"	"29.000"	"0.0851483588480989"	"28"	"0.0001301"	"0.004781"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQGEPQVQFK"	"[M].aAQGEPQVQFk.[L]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"0.4815"	"0.0000"	"1"	"1"	"1"	"491.93451"	"1473.78897"	"1473.78991"	"-0.63"	"-0.00031"	"5/96"	"5"	"96"	"713667.930480957"	"HCD"	"MS2"	"11.27634"	"24.2"	"100.000"	"72.3172"	"24387"	"24387"	"24357"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.7"	""	"26.1"	""	"33.9"	""	"38.0"	"2.0"	"44.5"	"41.1"	""	"840"	"27"	"36.000"	"29.000"	"0.0802138368597819"	"28"	"0"	"0.001535"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQGEPQVQFK"	"[M].aAQGEPQVQFk.[L]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"737.39862"	"1473.78996"	"1473.78991"	"0.04"	"0.00003"	"8/96"	"8"	"96"	"3456823.68743896"	"HCD"	"MS2"	"0.3913741"	"102.9"	"100.000"	"72.5112"	"24466"	"24466"	"24452"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"200.6"	""	"145.3"	""	"153.0"	""	"150.7"	"2.3"	"179.4"	"140.4"	""	"840"	"41"	"36.000"	"29.000"	"0.00324525845740195"	"26"	"0"	"0.003063"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQGEPQVQFK"	"[M].aAQGEPQVQFk.[L]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"491.93509"	"1473.79071"	"1473.78991"	"0.55"	"0.00027"	"4/96"	"4"	"96"	"562035.442565918"	"HCD"	"MS2"	"39.95833"	"19.1"	"100.000"	"72.9492"	"24644"	"24644"	"24621"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.9"	""	"24.8"	""	"24.0"	""	"35.6"	"1.0"	"35.6"	"31.4"	""	"830"	"10"	"36.000"	"29.000"	"4.53991892002919"	"15"	"0.007752"	"0.09526"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQGEPQVQFK"	"[M].aAQGEPQVQFk.[L]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"737.39905"	"1473.79082"	"1473.78991"	"0.62"	"0.00045"	"8/96"	"8"	"96"	"3363541.65802002"	"HCD"	"MS2"	"0"	"100.1"	"100.000"	"72.6672"	"24516"	"24516"	"24499"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"187.0"	""	"142.4"	""	"152.1"	""	"153.7"	"1.5"	"163.0"	"145.4"	""	"830"	"49"	"36.000"	"29.000"	"0.000548337688187429"	"27"	"0"	"0.0003907"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQGEPQVQFK"	"[M].aAQGEPQVQFk.[L]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"737.40015"	"1473.79302"	"1473.78991"	"2.11"	"0.00155"	"8/96"	"8"	"96"	"699925.500061035"	"HCD"	"MS2"	"31.31833"	"34.7"	"100.000"	"72.3812"	"24399"	"24399"	"24378"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.9"	""	"45.3"	""	"41.4"	""	"65.6"	""	"66.2"	"55.3"	""	"870"	"45"	"36.000"	"29.000"	"0.00126616194635897"	"26"	"0"	"0.003643"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENGEIETIAR"	"[K].lENGEIETIAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"737.40887"	"1473.81047"	"1473.81104"	"-0.38"	"-0.00028"	"9/108"	"9"	"108"	"1235011.99420166"	"HCD"	"MS2"	"36.76218"	"64.8"	"100.000"	"67.4263"	"22394"	"22394"	"22379"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.6"	""	"79.8"	""	"86.0"	""	"107.8"	"2.4"	"116.5"	"130.5"	""	"896"	"27"	"36.000"	"29.000"	"0.0927423324258386"	"24"	"0"	"0.0002351"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENGEIETIAR"	"[K].lENGEIETIAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"737.40930"	"1473.81133"	"1473.81104"	"0.20"	"0.00014"	"8/108"	"8"	"108"	"1011807.33081055"	"HCD"	"MS2"	"37.73405"	"52.7"	"100.000"	"67.5200"	"22417"	"22417"	"22401"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"74.6"	""	"60.4"	""	"76.6"	""	"85.5"	"3.5"	"104.7"	"94.6"	""	"891"	"19"	"36.000"	"29.000"	"0.52825997730847"	"19"	"0"	"0.0004095"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHGQDYLVGNR"	"[K].sHGQDYLVGNR.[L]"	"N-Term(TMT6plex)"	"1"	"3"	"P00502"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3"	"P00502; P04904; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"0"	"2"	"2"	"0.9508"	"0.0000"	"1"	"1"	"1"	"737.88214"	"1474.75701"	"1474.76001"	"-2.03"	"-0.00150"	"17/102"	"17"	"102"	"1161623.7288208"	"HCD"	"MS2"	"0"	"56.1"	"100.000"	"28.5794"	"6641"	"6641"	"6624"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"111.6"	""	"69.3"	""	"93.4"	""	"88.0"	""	"81.9"	"87.8"	""	"738"	"61"	"35.000"	"28.000"	"2.95819205390053E-05"	"19"	"0"	"5.054E-06"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHGQDYLVGNR"	"[K].sHGQDYLVGNR.[L]"	"N-Term(TMT6plex)"	"1"	"3"	"P00502"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3"	"P00502; P04904; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"492.25763"	"1474.75833"	"1474.76001"	"-1.13"	"-0.00056"	"7/102"	"7"	"102"	"30313458.407959"	"HCD"	"MS2"	"6.636156"	"109.2"	"45.987"	"28.5681"	"6637"	"6637"	"6624"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"181.1"	""	"145.9"	""	"159.6"	""	"177.4"	"2.5"	"187.1"	"178.9"	""	"732"	"55"	"35.000"	"28.000"	"0.000105555553014434"	"21"	"0"	"1.606E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHGQDYLVGNR"	"[K].sHGQDYLVGNR.[L]"	"N-Term(TMT6plex)"	"1"	"3"	"P00502"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3"	"P00502; P04904; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"0"	"3"	"3"	"0.9254"	"0.0000"	"1"	"1"	"1"	"492.25812"	"1474.75980"	"1474.76001"	"-0.14"	"-0.00007"	"8/102"	"8"	"102"	"33863996.8372803"	"HCD"	"MS2"	"7.919921"	"130.4"	"46.892"	"28.6717"	"6665"	"6665"	"6648"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"216.3"	""	"160.0"	""	"195.3"	""	"211.9"	"3.5"	"226.6"	"219.7"	""	"762"	"67"	"35.000"	"28.000"	"7.32697948714771E-06"	"21"	"0"	"1.002E-05"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHGQDYLVGNR"	"[K].sHGQDYLVGNR.[L]"	"N-Term(TMT6plex)"	"1"	"3"	"P00502"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3"	"P00502; P04904; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"737.88409"	"1474.76091"	"1474.76001"	"0.61"	"0.00045"	"9/102"	"9"	"102"	"1055398.99298096"	"HCD"	"MS2"	"0"	"51.0"	"100.000"	"28.6442"	"6654"	"6654"	"6632"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.5"	""	"64.8"	""	"76.3"	""	"84.9"	"0.7"	"79.3"	"84.9"	""	"764"	"57"	"35.000"	"28.000"	"7.26211902930701E-05"	"25"	"0"	"5.117E-05"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAIWELEER"	"[R].eAAIWELEER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"737.88989"	"1474.77251"	"1474.77392"	"-0.96"	"-0.00071"	"5/88"	"5"	"88"	"80977.1618041992"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"86.7731"	"30164"	"30164"	"30145"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.0"	""	"6.5"	""	"4.4"	""	"9.4"	""	"12.4"	"8.2"	""	"808"	"15"	"36.000"	"29.000"	"1.37841936295259"	"19"	"0.003449"	"0.03538"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAIWELEER"	"[R].eAAIWELEER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"0"	"2"	"2"	"0.5319"	"0.0000"	"1"	"1"	"1"	"737.89008"	"1474.77287"	"1474.77392"	"-0.71"	"-0.00052"	"10/88"	"10"	"88"	"317813.068969727"	"HCD"	"MS2"	"10.11062"	"18.8"	"100.000"	"86.4878"	"30056"	"30056"	"30045"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.2"	""	"18.0"	""	"23.0"	""	"33.6"	""	"43.8"	"37.2"	""	"806"	"47"	"36.000"	"29.000"	"0.000794886362654287"	""	"0"	"0.0001714"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAIWELEER"	"[R].eAAIWELEER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"737.89020"	"1474.77312"	"1474.77392"	"-0.55"	"-0.00040"	"8/88"	"8"	"88"	"239543.098571777"	"HCD"	"MS2"	"0"	"12.7"	"100.000"	"86.4717"	"30047"	"30047"	"30038"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.3"	""	"12.4"	""	"15.2"	""	"28.2"	""	"23.9"	"25.0"	""	"799"	"55"	"36.000"	"29.000"	"0.000136620787284227"	""	"0"	"0.0002639"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAIWELEER"	"[R].eAAIWELEER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"737.89069"	"1474.77410"	"1474.77392"	"0.12"	"0.00009"	"5/88"	"5"	"88"	"82828.7499389648"	"HCD"	"MS2"	"0"	"4.7"	"100.000"	"86.7936"	"30176"	"30176"	"30158"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.7"	""	"6.4"	""	"3.6"	""	"9.6"	""	"12.7"	"7.9"	""	"793"	"14"	"35.000"	"28.000"	"1.47993687566003"	"19"	"0.003111"	"0.0314"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHMQPTHPIR"	"[K].eHMQPTHPIR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P68511; P61983"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P68511; P61983"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"492.26379"	"1474.77683"	"1474.77863"	"-1.22"	"-0.00060"	"7/94"	"7"	"94"	"11183479.1861572"	"HCD"	"MS2"	"4.034962"	"128.9"	"100.000"	"21.0025"	"3576"	"3576"	"3555"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"207.7"	""	"176.3"	""	"183.9"	""	"192.0"	""	"247.0"	"213.9"	""	"838"	"54"	"36.000"	"29.000"	"0.000180390649796027"	"22"	"0"	"0.0001046"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHMQPTHPIR"	"[K].eHMQPTHPIR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P68511; P61983"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P68511; P61983"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"4"	"4"	"0.8571"	"0.0000"	"1"	"1"	"1"	"369.44971"	"1474.77700"	"1474.77863"	"-1.11"	"-0.00041"	"10/94"	"10"	"94"	"15914208.1115112"	"HCD"	"MS2"	"30.315"	"214.6"	"90.839"	"21.0002"	"3575"	"3575"	"3555"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"314.7"	""	"290.9"	""	"313.8"	""	"336.7"	"3.8"	"394.4"	"378.3"	""	"839"	"35"	"36.000"	"29.000"	"0.0121264021065232"	"20"	"0"	"2.518E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHMQPTHPIR"	"[K].eHMQPTHPIR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P68511; P61983"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P68511; P61983"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"492.26395"	"1474.77729"	"1474.77863"	"-0.91"	"-0.00045"	"7/94"	"7"	"94"	"10416865.2717285"	"HCD"	"MS2"	"8.538446"	"117.5"	"100.000"	"21.0580"	"3581"	"3581"	"3561"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"174.0"	""	"139.2"	""	"180.8"	""	"171.9"	""	"232.2"	"217.2"	""	"839"	"56"	"36.000"	"29.000"	"0.000107828103087154"	"23"	"0"	"7.568E-05"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHMQPTHPIR"	"[K].eHMQPTHPIR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P68511; P61983"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P68511; P61983"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"4"	"4"	"0.9091"	"0.0000"	"1"	"1"	"1"	"369.44983"	"1474.77749"	"1474.77863"	"-0.78"	"-0.00029"	"11/94"	"11"	"94"	"13379766.1801147"	"HCD"	"MS2"	"6.922472"	"164.2"	"68.743"	"21.1153"	"3604"	"3604"	"3587"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"217.5"	""	"205.7"	""	"225.1"	""	"236.3"	"5.1"	"373.3"	"296.0"	""	"839"	"55"	"36.000"	"29.000"	"0.00013512383579434"	"21"	"0"	"1.295E-05"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHMQPTHPIR"	"[K].eHMQPTHPIR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P68511; P61983"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P68511; P61983"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"737.89301"	"1474.77873"	"1474.77863"	"0.07"	"0.00005"	"10/94"	"10"	"94"	"503427.524353027"	"HCD"	"MS2"	"100"	"22.3"	"100.000"	"21.0351"	"3572"	"3572"	"3551"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.0"	""	"32.6"	""	"30.9"	""	"26.5"	""	"39.1"	"45.2"	""	"834"	"19"	"36.000"	"29.000"	"0.558645178656614"	"14"	"0.000936"	"0.01233"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHMQPTHPIR"	"[K].eHMQPTHPIR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P68511; P61983"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P68511; P61983"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"737.89319"	"1474.77910"	"1474.77863"	"0.32"	"0.00023"	"7/94"	"7"	"94"	"779752.15222168"	"HCD"	"MS2"	"0"	"32.9"	"100.000"	"20.9842"	"3569"	"3569"	"3545"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.3"	""	"50.6"	""	"47.4"	""	"37.0"	"1.8"	"58.2"	"58.1"	""	"815"	"42"	"36.000"	"29.000"	"0.00278693996267183"	"17"	"0"	"0.001144"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTSTPPSPK"	"[K].sDTSTPPSPk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"492.27609"	"1474.81372"	"1474.81534"	"-1.10"	"-0.00054"	"9/86"	"9"	"86"	"4617378.47442627"	"HCD"	"MS2"	"21.03118"	"128.9"	"100.000"	"34.1038"	"8876"	"8876"	"8855"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"153.2"	""	"142.4"	""	"145.0"	""	"234.6"	""	"270.8"	"279.3"	""	"996"	"25"	"36.000"	"29.000"	"0.151436074278679"	"15"	"0.0006732"	"0.008326"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTSTPPSPK"	"[K].sDTSTPPSPk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"737.91058"	"1474.81389"	"1474.81534"	"-0.99"	"-0.00073"	"8/86"	"8"	"86"	"616936.086303711"	"HCD"	"MS2"	"0"	"41.2"	"100.000"	"34.2638"	"8941"	"8941"	"8919"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.0"	""	"51.5"	""	"43.5"	""	"78.3"	"0.2"	"84.8"	"80.7"	""	"996"	"52"	"36.000"	"29.000"	"0.000292569697559829"	"23"	"0"	"0.0004244"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTSTPPSPK"	"[K].sDTSTPPSPk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"492.27634"	"1474.81446"	"1474.81534"	"-0.60"	"-0.00030"	"9/86"	"9"	"86"	"5347948.92321777"	"HCD"	"MS2"	"9.372323"	"141.2"	"100.000"	"34.0986"	"8868"	"8868"	"8841"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"158.8"	""	"162.3"	""	"183.5"	""	"243.0"	""	"294.1"	"301.6"	""	"1000"	"28"	"36.000"	"30.000"	"0.0741259042572977"	"17"	"0.0003538"	"0.00642"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTSTPPSPK"	"[K].sDTSTPPSPk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"737.91089"	"1474.81450"	"1474.81534"	"-0.57"	"-0.00042"	"13/86"	"13"	"86"	"890558.678283691"	"HCD"	"MS2"	"0"	"54.4"	"100.000"	"33.6293"	"8687"	"8687"	"8669"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.2"	""	"60.3"	""	"64.6"	""	"113.8"	""	"93.9"	"109.6"	""	"1000"	"52"	"36.000"	"30.000"	"0.000331871535200954"	"16"	"0"	"0.0004898"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTSTPPSPK"	"[K].sDTSTPPSPk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"492.27640"	"1474.81464"	"1474.81534"	"-0.48"	"-0.00023"	"10/86"	"10"	"86"	"7264980.2444458"	"HCD"	"MS2"	"3.482796"	"195.1"	"100.000"	"33.7904"	"8746"	"8746"	"8721"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"254.0"	""	"234.8"	""	"235.8"	""	"364.6"	""	"379.2"	"383.3"	""	"979"	"26"	"36.000"	"29.000"	"0.137642545648028"	"16"	"0.000936"	"0.01206"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTSTPPSPK"	"[K].sDTSTPPSPk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"492.27640"	"1474.81464"	"1474.81534"	"-0.48"	"-0.00023"	"9/86"	"9"	"86"	"8971889.7555542"	"HCD"	"MS2"	"12.84799"	"224.7"	"100.000"	"33.8063"	"8759"	"8759"	"8731"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"312.7"	""	"244.0"	""	"271.6"	""	"421.7"	"1.6"	"429.9"	"449.9"	""	"979"	"25"	"36.000"	"29.000"	"0.142808052335357"	"17"	"0.001465"	"0.01829"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTSTPPSPK"	"[K].sDTSTPPSPk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"737.91101"	"1474.81474"	"1474.81534"	"-0.41"	"-0.00030"	"7/86"	"7"	"86"	"4242386.45227051"	"HCD"	"MS2"	"1.934946"	"228.4"	"100.000"	"33.9617"	"8812"	"8812"	"8793"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"273.7"	""	"254.6"	""	"287.0"	""	"426.9"	""	"473.0"	"454.2"	""	"979"	"54"	"36.000"	"29.000"	"0.000181448213312571"	"24"	"0"	"0.0001654"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTSTPPSPK"	"[K].sDTSTPPSPk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"737.91107"	"1474.81487"	"1474.81534"	"-0.32"	"-0.00024"	"15/86"	"15"	"86"	"4270360.24511719"	"HCD"	"MS2"	"0"	"215.4"	"100.000"	"33.9469"	"8812"	"8812"	"8792"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"263.4"	""	"241.9"	""	"251.7"	""	"409.8"	"2.9"	"434.5"	"440.5"	""	"979"	"55"	"36.000"	"29.000"	"0.000167784831514487"	"23"	"0"	"3.681E-05"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTSTPPSPK"	"[K].sDTSTPPSPk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"737.91113"	"1474.81499"	"1474.81534"	"-0.24"	"-0.00018"	"14/86"	"14"	"86"	"810604.106811523"	"HCD"	"MS2"	"0"	"49.4"	"100.000"	"33.6455"	"8687"	"8687"	"8667"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.3"	""	"61.7"	""	"50.8"	""	"84.2"	""	"106.3"	"108.1"	""	"979"	"54"	"36.000"	"29.000"	"0.000214167070474964"	"23"	"0"	"9.914E-05"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTSTPPSPK"	"[K].sDTSTPPSPk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"737.91119"	"1474.81511"	"1474.81534"	"-0.16"	"-0.00012"	"7/86"	"7"	"86"	"623099.20526123"	"HCD"	"MS2"	"0"	"41.0"	"100.000"	"34.3192"	"8957"	"8957"	"8935"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.9"	""	"48.3"	""	"47.0"	""	"74.8"	""	"91.1"	"82.6"	""	"979"	"41"	"36.000"	"29.000"	"0.00352982111060029"	"21"	"0"	"0.001299"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDVYDK"	"[K].nYTDVYDk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"738.39221"	"1475.77715"	"1475.77823"	"-0.73"	"-0.00054"	"7/78"	"7"	"78"	"686997.859924316"	"HCD"	"MS2"	"15.58224"	"63.7"	"100.000"	"57.6781"	"18452"	"18452"	"18426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"79.1"	""	"62.8"	""	"70.1"	""	"121.8"	""	"135.6"	"136.7"	""	"870"	"37"	"36.000"	"29.000"	"0.00811875165513082"	"21"	"0"	"0.003083"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDVYDK"	"[K].nYTDVYDk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"738.39264"	"1475.77800"	"1475.77823"	"-0.16"	"-0.00011"	"7/78"	"7"	"78"	"477785.734863281"	"HCD"	"MS2"	"3.891946"	"47.6"	"100.000"	"57.7959"	"18514"	"18514"	"18495"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.2"	""	"49.5"	""	"49.3"	""	"80.1"	"1.1"	"103.1"	"112.0"	""	"872"	"37"	"36.000"	"29.000"	"0.00778908582635495"	"22"	"0"	"0.001556"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDVYDK"	"[K].nYTDVYDk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"738.39270"	"1475.77812"	"1475.77823"	"-0.07"	"-0.00005"	"7/78"	"7"	"78"	"770478.993408203"	"HCD"	"MS2"	"29.77845"	"71.7"	"100.000"	"57.4873"	"18389"	"18389"	"18361"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.5"	""	"71.1"	""	"66.6"	""	"146.0"	""	"147.3"	"162.2"	""	"872"	"39"	"36.000"	"29.000"	"0.00557810248612681"	"16"	"0"	"0.001836"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDVYDK"	"[K].nYTDVYDk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"738.39276"	"1475.77825"	"1475.77823"	"0.01"	"0.00001"	"14/78"	"14"	"78"	"443855.59552002"	"HCD"	"MS2"	"0"	"45.8"	"100.000"	"57.9961"	"18581"	"18581"	"18559"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.2"	""	"48.9"	""	"50.1"	""	"80.7"	""	"103.3"	"96.0"	""	"882"	"44"	"36.000"	"29.000"	"0.00166893179860238"	"24"	"0"	"0.001432"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGGPNYQEGLR"	"[R].rGGPNYQEGLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"1"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"492.60144"	"1475.78977"	"1475.79164"	"-1.27"	"-0.00062"	"9/100"	"9"	"100"	"8675683.97137451"	"HCD"	"MS2"	"24.6335"	"158.5"	"100.000"	"25.9891"	"5591"	"5591"	"5573"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"285.0"	""	"217.0"	""	"292.0"	""	"214.3"	"1.1"	"225.6"	"261.3"	""	"949"	"76"	"36.000"	"29.000"	"1.1304105882107E-06"	"25"	"0"	"6.091E-06"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGGPNYQEGLR"	"[R].rGGPNYQEGLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"1"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"492.60162"	"1475.79032"	"1475.79164"	"-0.90"	"-0.00044"	"9/100"	"9"	"100"	"8308505.59588623"	"HCD"	"MS2"	"56.09365"	"152.8"	"100.000"	"26.0740"	"5610"	"5610"	"5595"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"272.4"	"2.5"	"213.1"	""	"285.3"	""	"193.7"	"0.7"	"231.8"	"243.3"	""	"949"	"76"	"36.000"	"29.000"	"1.11490077349252E-06"	"25"	"0"	"1.466E-06"	"1.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGELEQEVVSR"	"[R].tGELEQEVVSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"0"	"2"	"2"	"0.5526"	"0.0000"	"1"	"1"	"1"	"738.40033"	"1475.79338"	"1475.79030"	"2.09"	"0.00154"	"11/108"	"11"	"108"	"403632.058105469"	"HCD"	"MS2"	"21.77188"	"30.1"	"100.000"	"56.0846"	"17817"	"17817"	"17789"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.7"	""	"33.9"	""	"36.1"	""	"69.7"	"5.6"	"58.2"	"51.1"	""	"992"	"38"	"36.000"	"29.000"	"0.00806272182852241"	""	"0"	"0.002795"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EKIETELR"	"[R].ekIETELR.[D]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.63199"	"1475.88141"	"1475.88336"	"-1.32"	"-0.00065"	"5/78"	"5"	"78"	"5390134.44464111"	"HCD"	"MS2"	"4.754201"	"266.0"	"100.000"	"43.2957"	"12613"	"12613"	"12591"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"532.1"	""	"195.0"	""	"250.7"	""	"590.8"	"1.1"	"520.0"	"429.7"	""	"820"	"7"	"36.000"	"29.000"	"8.10557552445863"	"13"	"0.005617"	"0.06338"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYTDDSFTNR"	"[R].eYTDDSFTNR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"738.84351"	"1476.67974"	"1476.68042"	"-0.46"	"-0.00034"	"6/88"	"6"	"88"	"375021.439941406"	"HCD"	"MS2"	"26.87581"	"33.3"	"100.000"	"45.3762"	"13454"	"13454"	"13431"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.7"	""	"40.4"	""	"33.1"	""	"56.0"	"2.3"	"63.7"	"61.2"	""	"259"	"18"	"31.000"	"24.000"	"0.188481950935365"	"20"	"0.004867"	"0.05162"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYTDDSFTNR"	"[R].eYTDDSFTNR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"738.84369"	"1476.68010"	"1476.68042"	"-0.21"	"-0.00016"	"8/88"	"8"	"88"	"994712.196166992"	"HCD"	"MS2"	"23.69623"	"73.3"	"100.000"	"45.2615"	"13396"	"13396"	"13371"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"141.7"	""	"88.9"	""	"66.7"	""	"124.7"	""	"151.1"	"126.0"	""	"258"	"33"	"31.000"	"24.000"	"0.00577550162387507"	"24"	"0"	"0.0006062"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYTDDSFTNR"	"[R].eYTDDSFTNR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"738.84393"	"1476.68059"	"1476.68042"	"0.12"	"0.00009"	"9/88"	"9"	"88"	"711832.232421875"	"HCD"	"MS2"	"0"	"52.2"	"100.000"	"45.0703"	"13329"	"13329"	"13303"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"96.3"	""	"69.2"	""	"57.1"	""	"84.6"	""	"101.3"	"89.3"	""	"257"	"33"	"31.000"	"24.000"	"0.00587358323655115"	"23"	"0"	"3.349E-05"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWGDSVGTPSER"	"[R].gWGDSVGTPSER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYT7"	"Monoacylglycerol lipase ABHD12 OS=Rattus norvegicus OX=10116 GN=Abhd12 PE=2 SV=1"	"Q6AYT7"	"Monoacylglycerol lipase ABHD12 OS=Rattus norvegicus OX=10116 GN=Abhd12 PE=2 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"738.86780"	"1476.72832"	"1476.72804"	"0.19"	"0.00014"	"9/102"	"9"	"102"	"728392.956298828"	"HCD"	"MS2"	"0"	"46.4"	"100.000"	"49.9456"	"15304"	"15304"	"15278"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.0"	""	"53.8"	""	"68.7"	""	"72.1"	"1.1"	"98.8"	"77.3"	""	"548"	"37"	"34.000"	"27.000"	"0.00592584875501203"	"23"	"0"	"0.0001844"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWGDSVGTPSER"	"[R].gWGDSVGTPSER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYT7"	"Monoacylglycerol lipase ABHD12 OS=Rattus norvegicus OX=10116 GN=Abhd12 PE=2 SV=1"	"Q6AYT7"	"Monoacylglycerol lipase ABHD12 OS=Rattus norvegicus OX=10116 GN=Abhd12 PE=2 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"738.86798"	"1476.72869"	"1476.72804"	"0.44"	"0.00032"	"8/102"	"8"	"102"	"458927.751403809"	"HCD"	"MS2"	"0"	"31.6"	"100.000"	"49.5164"	"15141"	"15141"	"15110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.1"	""	"37.6"	""	"43.1"	""	"58.6"	""	"66.5"	"57.3"	""	"563"	"23"	"34.000"	"27.000"	"0.138828425813314"	"23"	"0.0023"	"0.02301"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPSANPSENR"	"[R].yLPSANPSENR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"738.88452"	"1476.76177"	"1476.76442"	"-1.80"	"-0.00133"	"5/100"	"5"	"100"	"275004.430908203"	"HCD"	"MS2"	"37.62143"	"17.3"	"100.000"	"46.2969"	"13818"	"13818"	"13789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.4"	""	"19.8"	""	"25.1"	""	"30.9"	""	"30.4"	"32.3"	""	"818"	"33"	"36.000"	"29.000"	"0.022528034782981"	"25"	"0.001812"	"0.0202"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPSANPSENR"	"[R].yLPSANPSENR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"738.88617"	"1476.76506"	"1476.76442"	"0.43"	"0.00032"	"10/100"	"10"	"100"	"276737.216918945"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"46.1036"	"13751"	"13751"	"13721"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.4"	""	"17.4"	""	"27.7"	""	"23.8"	""	"28.7"	"35.6"	""	"863"	"31"	"36.000"	"29.000"	"0.0351544898554992"	"17"	"0.0023"	"0.02297"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPTENELK"	"[R].sTPTENELk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B2RYU6"	"Trafficking protein particle complex subunit 2-like protein OS=Rattus norvegicus OX=10116 GN=Trappc2l PE=2 SV=1"	"B2RYU6"	"Trafficking protein particle complex subunit 2-like protein OS=Rattus norvegicus OX=10116 GN=Trappc2l PE=2 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"738.91766"	"1476.82805"	"1476.83099"	"-1.99"	"-0.00147"	"8/82"	"8"	"82"	"580123.783691406"	"HCD"	"MS2"	"38.09324"	"48.3"	"100.000"	"42.8706"	"12429"	"12429"	"12402"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.6"	""	"56.3"	""	"58.3"	""	"93.0"	"0.3"	"83.8"	"97.0"	""	"1077"	"31"	"37.000"	"30.000"	"0.0448937317917673"	"19"	"0.000936"	"0.01226"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDLEAEVSK"	"[K].qDLEAEVSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"738.91864"	"1476.83000"	"1476.83099"	"-0.67"	"-0.00050"	"10/92"	"10"	"92"	"371279.919250488"	"HCD"	"MS2"	"0"	"33.6"	"100.000"	"58.0540"	"18620"	"18620"	"18591"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.8"	""	"38.7"	""	"34.9"	""	"62.7"	"0.9"	"70.2"	"63.6"	""	"1052"	"25"	"37.000"	"30.000"	"0.154520371693177"	"27"	"0.0002479"	"0.005618"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDLEAEVSK"	"[K].qDLEAEVSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"738.91937"	"1476.83147"	"1476.83099"	"0.32"	"0.00024"	"6/92"	"6"	"92"	"396125.166748047"	"HCD"	"MS2"	"0"	"36.7"	"100.000"	"58.2517"	"18686"	"18686"	"18655"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.2"	""	"37.1"	""	"32.3"	""	"73.1"	"1.6"	"79.5"	"69.5"	""	"1053"	"21"	"37.000"	"30.000"	"0.382294786589609"	"21"	"0.0004639"	"0.007503"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPTENELK"	"[R].sTPTENELk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B2RYU6"	"Trafficking protein particle complex subunit 2-like protein OS=Rattus norvegicus OX=10116 GN=Trappc2l PE=2 SV=1"	"B2RYU6"	"Trafficking protein particle complex subunit 2-like protein OS=Rattus norvegicus OX=10116 GN=Trappc2l PE=2 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"738.91943"	"1476.83159"	"1476.83099"	"0.40"	"0.00030"	"7/82"	"7"	"82"	"646593.360290527"	"HCD"	"MS2"	"34.00754"	"54.8"	"100.000"	"42.7715"	"12399"	"12399"	"12376"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"73.8"	""	"63.4"	""	"64.5"	""	"109.3"	"0.4"	"105.4"	"102.4"	""	"1053"	"37"	"37.000"	"30.000"	"0.00942753982149583"	"23"	"0.0003538"	"0.007063"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVEPEVAIHR"	"[K].tPVEPEVAIHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.95023"	"1476.83612"	"1476.83719"	"-0.72"	"-0.00036"	"8/90"	"8"	"90"	"5833472.4442749"	"HCD"	"MS2"	"28.43292"	"82.9"	"100.000"	"45.6270"	"13544"	"13544"	"13531"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"109.3"	""	"103.3"	""	"106.0"	""	"143.4"	""	"171.2"	"158.9"	""	"971"	"45"	"36.000"	"29.000"	"0.00146956646934318"	"15"	"0"	"5.829E-05"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVEPEVAIHR"	"[K].tPVEPEVAIHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.95026"	"1476.83622"	"1476.83719"	"-0.66"	"-0.00033"	"8/90"	"8"	"90"	"2700055.61273193"	"HCD"	"MS2"	"24.53558"	"59.2"	"100.000"	"46.0876"	"13744"	"13744"	"13721"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"76.8"	""	"88.8"	""	"80.3"	""	"95.3"	"2.0"	"116.9"	"101.0"	""	"983"	"43"	"36.000"	"29.000"	"0.00260929704339531"	"15"	"0"	"0.001097"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVEPEVAIHR"	"[K].tPVEPEVAIHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"0"	"3"	"3"	"0.9815"	"0.0000"	"1"	"1"	"1"	"492.95032"	"1476.83640"	"1476.83719"	"-0.54"	"-0.00026"	"12/90"	"12"	"90"	"27880625.0611572"	"HCD"	"MS2"	"2.719147"	"71.2"	"42.920"	"45.9149"	"13662"	"13662"	"13645"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"109.0"	""	"81.5"	""	"105.4"	""	"117.1"	"0.1"	"142.8"	"119.0"	""	"983"	"54"	"36.000"	"29.000"	"0.000179689840077851"	"17"	"0"	"2.666E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVEPEVAIHR"	"[K].tPVEPEVAIHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"0"	"3"	"3"	"0.9767"	"0.0000"	"1"	"1"	"1"	"492.95032"	"1476.83640"	"1476.83719"	"-0.54"	"-0.00026"	"8/90"	"8"	"90"	"5738379.91314697"	"HCD"	"MS2"	"27.88801"	"80.1"	"100.000"	"45.4522"	"13485"	"13485"	"13461"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"104.9"	""	"97.2"	""	"97.3"	""	"136.2"	"0.4"	"168.7"	"155.9"	""	"983"	"43"	"36.000"	"29.000"	"0.00250336123124612"	"16"	"0"	"5.898E-05"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVEPEVAIHR"	"[K].tPVEPEVAIHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"492.95035"	"1476.83649"	"1476.83719"	"-0.48"	"-0.00023"	"7/90"	"7"	"90"	"3021681.69067383"	"HCD"	"MS2"	"23.1614"	"55.9"	"100.000"	"46.2394"	"13794"	"13794"	"13773"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"73.8"	""	"70.4"	""	"78.2"	""	"97.6"	"1.6"	"110.0"	"98.4"	""	"983"	"42"	"36.000"	"29.000"	"0.0034318122660393"	"18"	"0"	"0.0001753"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVEPEVAIHR"	"[K].tPVEPEVAIHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.95056"	"1476.83713"	"1476.83719"	"-0.04"	"-0.00002"	"13/90"	"13"	"90"	"26411204.5205078"	"HCD"	"MS2"	"2.815163"	"80.5"	"50.148"	"45.7674"	"13613"	"13613"	"13596"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"109.6"	""	"97.9"	""	"120.5"	""	"141.0"	"3.5"	"156.4"	"133.6"	""	"979"	"63"	"36.000"	"29.000"	"2.5220442152277E-05"	"16"	"0"	"1.008E-05"	"0.902"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEQIALDCTPR"	"[R].gEQIALDcTPR.[E]"	"N-Term(TMT6plex); C8(Methylthio)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"739.37006"	"1477.73284"	"1477.73405"	"-0.82"	"-0.00061"	"5/110"	"5"	"110"	"205914.550048828"	"HCD"	"MS2"	"44.06366"	"13.2"	"100.000"	"78.8380"	"27016"	"27016"	"26994"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.7"	""	"14.2"	""	"15.3"	""	"20.4"	""	"25.2"	"36.8"	""	"619"	"8"	"34.000"	"27.000"	"5.40331956328896"	"19"	"0.005369"	"0.06079"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEQIALDCTPR"	"[R].gEQIALDcTPR.[E]"	"N-Term(TMT6plex); C8(Methylthio)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"739.37012"	"1477.73296"	"1477.73405"	"-0.74"	"-0.00055"	"6/110"	"6"	"110"	"234405.646606445"	"HCD"	"MS2"	"13.11022"	"16.7"	"100.000"	"78.4021"	"26836"	"26836"	"26813"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.2"	""	"24.1"	""	"21.8"	""	"26.0"	""	"41.9"	"31.4"	""	"619"	"25"	"34.000"	"27.000"	"0.102721334612533"	"18"	"0.0002479"	"0.005901"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEQIALDCTPR"	"[R].gEQIALDcTPR.[E]"	"N-Term(TMT6plex); C8(Methylthio)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"739.37030"	"1477.73332"	"1477.73405"	"-0.49"	"-0.00036"	"6/110"	"6"	"110"	"346776.477478027"	"HCD"	"MS2"	"12.35328"	"23.2"	"100.000"	"78.4134"	"26846"	"26846"	"26831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.7"	""	"27.4"	""	"27.9"	""	"38.3"	""	"44.6"	"58.2"	""	"618"	"25"	"34.000"	"27.000"	"0.0990737221272189"	"26"	"0"	"0.001108"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEQIALDCTPR"	"[R].gEQIALDcTPR.[E]"	"N-Term(TMT6plex); C8(Methylthio)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"739.37048"	"1477.73369"	"1477.73405"	"-0.24"	"-0.00018"	"8/110"	"8"	"110"	"503477.217285156"	"HCD"	"MS2"	"21.93692"	"29.3"	"100.000"	"78.6974"	"26955"	"26955"	"26934"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.7"	""	"41.3"	""	"38.8"	""	"39.7"	"0.1"	"59.3"	"70.1"	""	"625"	"43"	"34.000"	"27.000"	"0.00164002331328054"	""	"0"	"0.0002098"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDENNPEYLR"	"[R].vDENNPEYLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"739.37756"	"1477.74785"	"1477.74844"	"-0.40"	"-0.00029"	"8/94"	"8"	"94"	"460562.565979004"	"HCD"	"MS2"	"0"	"29.0"	"100.000"	"48.6887"	"14791"	"14791"	"14764"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.9"	""	"31.0"	""	"31.1"	""	"55.6"	""	"72.7"	"60.8"	""	"700"	"25"	"35.000"	"28.000"	"0.105212670591988"	"19"	"0.0006732"	"0.00922"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDENNPEYLR"	"[R].vDENNPEYLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"739.37817"	"1477.74907"	"1477.74844"	"0.43"	"0.00032"	"8/94"	"8"	"94"	"670762.942382813"	"HCD"	"MS2"	"33.77678"	"38.7"	"100.000"	"48.3537"	"14667"	"14667"	"14642"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.6"	""	"39.3"	""	"45.3"	""	"74.0"	"2.6"	"86.4"	"73.5"	""	"711"	"35"	"35.000"	"28.000"	"0.0102763669818093"	"19"	"0"	"0.0005744"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDENNPEYLR"	"[R].vDENNPEYLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"739.37830"	"1477.74932"	"1477.74844"	"0.59"	"0.00044"	"8/94"	"8"	"94"	"847148.378356934"	"HCD"	"MS2"	"16.86819"	"68.6"	"100.000"	"49.0203"	"14926"	"14926"	"14904"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.7"	""	"75.9"	""	"90.7"	""	"127.2"	""	"164.4"	"137.1"	""	"712"	"12"	"35.000"	"28.000"	"2.11568008467144"	"19"	"0.0023"	"0.02317"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEADPELSK"	"[K].mEADPELSk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"739.40222"	"1477.79717"	"1477.79725"	"-0.06"	"-0.00004"	"12/76"	"12"	"76"	"474293.506835938"	"HCD"	"MS2"	"28.24508"	"46.9"	"100.000"	"59.3921"	"19166"	"19166"	"19142"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.9"	""	"46.8"	""	"40.6"	""	"75.3"	""	"108.2"	"118.8"	""	"1078"	"21"	"37.000"	"30.000"	"0.440137898162281"	"24"	"0.004069"	"0.04452"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEADPELSK"	"[K].mEADPELSk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"739.40234"	"1477.79741"	"1477.79725"	"0.11"	"0.00008"	"8/76"	"8"	"76"	"519904.036010742"	"HCD"	"MS2"	"29.89647"	"48.8"	"100.000"	"59.5527"	"19217"	"19217"	"19190"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.8"	""	"44.2"	""	"44.6"	""	"79.8"	"0.7"	"123.1"	"104.5"	""	"1072"	"40"	"37.000"	"30.000"	"0.00552286960556706"	"29"	"0"	"0.003657"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATNDSVVADK"	"[R].aTNDSVVADk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"739.41644"	"1477.82561"	"1477.82624"	"-0.43"	"-0.00032"	"9/100"	"9"	"100"	"1934157.24658203"	"HCD"	"MS2"	"29.4271"	"153.9"	"100.000"	"41.1277"	"11728"	"11728"	"11709"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"251.6"	""	"166.2"	""	"195.7"	""	"238.5"	""	"314.4"	"295.5"	""	"985"	"63"	"36.000"	"29.000"	"2.62667436027654E-05"	""	"0"	"3.926E-05"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATNDSVVADK"	"[R].aTNDSVVADk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"2"	"2"	"0.7193"	"0.0000"	"1"	"1"	"1"	"739.41644"	"1477.82561"	"1477.82624"	"-0.43"	"-0.00032"	"9/100"	"9"	"100"	"1738388.84545898"	"HCD"	"MS2"	"39.36471"	"136.4"	"100.000"	"41.2800"	"11780"	"11780"	"11763"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"217.4"	""	"155.5"	""	"186.0"	""	"203.7"	""	"276.4"	"257.0"	""	"985"	"57"	"36.000"	"29.000"	"9.04495134099061E-05"	""	"0"	"4.208E-05"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSEEIEAK"	"[K].lTSEEIEAk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"739.42926"	"1477.85124"	"1477.85140"	"-0.10"	"-0.00008"	"9/74"	"9"	"74"	"469072.587402344"	"HCD"	"MS2"	"46.79385"	"33.0"	"100.000"	"61.4783"	"19983"	"19983"	"19953"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.3"	""	"38.0"	""	"42.9"	""	"57.6"	""	"60.8"	"68.8"	""	"903"	"13"	"36.000"	"29.000"	"2.36405597118466"	"18"	"0.0001301"	"0.004469"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSEEIEAK"	"[K].lTSEEIEAk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"739.42938"	"1477.85149"	"1477.85140"	"0.06"	"0.00005"	"12/74"	"12"	"74"	"466543.855224609"	"HCD"	"MS2"	"37.1383"	"32.4"	"100.000"	"61.6341"	"20031"	"20031"	"20001"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.5"	""	"36.5"	""	"35.8"	""	"48.9"	"0.8"	"73.1"	"67.7"	""	"903"	"16"	"36.000"	"29.000"	"1.19030362070016"	"17"	"0.0007829"	"0.009397"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLEMESAWR"	"[R].eVLEMESAWR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"739.87836"	"1478.74944"	"1478.75108"	"-1.11"	"-0.00082"	"8/84"	"8"	"84"	"231586.874389648"	"HCD"	"MS2"	"0"	"11.9"	"100.000"	"89.9793"	"31410"	"31410"	"31391"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.8"	""	"20.4"	""	"17.4"	""	"10.9"	""	"20.7"	"24.7"	""	"722"	"45"	"35.000"	"28.000"	"0.00111816836701718"	"19"	"0"	"0.0004332"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLEMESAWR"	"[R].eVLEMESAWR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9714"	"0.0000"	"1"	"1"	"1"	"739.87909"	"1478.75090"	"1478.75108"	"-0.12"	"-0.00009"	"7/84"	"7"	"84"	"147736.483764648"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"89.9105"	"31382"	"31382"	"31372"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.8"	""	"13.8"	""	"11.7"	""	"9.6"	""	"15.1"	"16.9"	""	"743"	"35"	"35.000"	"28.000"	"0.0106404211582029"	"16"	"0"	"0.001566"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQVANSAFVER"	"[K].eQVANSAFVER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.9028"	"0.0000"	"1"	"1"	"1"	"739.89270"	"1478.77812"	"1478.78007"	"-1.32"	"-0.00097"	"10/116"	"10"	"116"	"2047611.27526855"	"HCD"	"MS2"	"0"	"101.2"	"100.000"	"47.7978"	"14440"	"14440"	"14423"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"172.7"	""	"123.8"	""	"133.0"	""	"170.2"	"1.8"	"177.2"	"179.4"	""	"906"	"72"	"36.000"	"29.000"	"2.67361089317845E-06"	"24"	"0"	"5.468E-06"	"0.96"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQVANSAFVER"	"[K].eQVANSAFVER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.8507"	"0.0000"	"1"	"1"	"1"	"739.89331"	"1478.77934"	"1478.78007"	"-0.49"	"-0.00036"	"10/116"	"10"	"116"	"1865450.33184814"	"HCD"	"MS2"	"0"	"87.3"	"100.000"	"48.1237"	"14560"	"14560"	"14547"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"150.0"	""	"112.8"	""	"113.5"	""	"147.3"	"4.1"	"139.0"	"159.0"	""	"940"	"67"	"36.000"	"29.000"	"8.71159863004962E-06"	"27"	"0"	"2.221E-06"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQVANSAFVER"	"[K].eQVANSAFVER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"739.89337"	"1478.77947"	"1478.78007"	"-0.41"	"-0.00030"	"10/116"	"10"	"116"	"2056201.16271973"	"HCD"	"MS2"	"25.93378"	"111.2"	"100.000"	"47.5102"	"14323"	"14323"	"14301"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"169.9"	""	"133.6"	""	"145.5"	""	"188.6"	""	"207.4"	"216.1"	""	"937"	"62"	"36.000"	"29.000"	"3.10248431984276E-05"	"23"	"0"	"2.687E-06"	"1.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQVANSAFVER"	"[K].eQVANSAFVER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"739.89374"	"1478.78020"	"1478.78007"	"0.09"	"0.00006"	"9/116"	"9"	"116"	"2090294.20672607"	"HCD"	"MS2"	"18.71863"	"111.6"	"100.000"	"47.8386"	"14445"	"14445"	"14426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"167.0"	""	"136.4"	""	"153.1"	""	"207.0"	""	"203.7"	"189.6"	""	"938"	"65"	"36.000"	"29.000"	"1.57098790965021E-05"	"27"	"0"	"5.414E-06"	"0.961"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMTNINDGLLR"	"[R].smTNINDGLLR.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.9800"	"0.0000"	"1"	"1"	"1"	"739.89453"	"1478.78179"	"1478.78344"	"-1.12"	"-0.00083"	"9/106"	"9"	"106"	"1021408.20654297"	"HCD"	"MS2"	"0"	"52.0"	"100.000"	"55.2185"	"17449"	"17449"	"17431"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"70.2"	""	"67.4"	""	"53.5"	""	"121.6"	"0.5"	"89.2"	"90.0"	""	"957"	"50"	"36.000"	"29.000"	"0.00046653254164777"	"16"	"0"	"0.00333"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMTNINDGLLR"	"[R].smTNINDGLLR.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"739.89490"	"1478.78252"	"1478.78344"	"-0.63"	"-0.00046"	"9/106"	"9"	"106"	"1549506.0725708"	"HCD"	"MS2"	"0"	"68.5"	"100.000"	"54.6753"	"17242"	"17242"	"17224"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"97.5"	""	"99.0"	""	"72.0"	""	"169.7"	"1.2"	"102.7"	"105.1"	""	"959"	"54"	"36.000"	"29.000"	"0.000207390381981287"	"24"	"0"	"0.0001133"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMTNINDGLLR"	"[R].smTNINDGLLR.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"739.89514"	"1478.78301"	"1478.78344"	"-0.30"	"-0.00022"	"9/106"	"9"	"106"	"1538858.88415527"	"HCD"	"MS2"	"0"	"72.1"	"100.000"	"54.9612"	"17358"	"17358"	"17345"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"96.2"	""	"100.4"	""	"79.7"	""	"172.3"	""	"124.6"	"112.8"	""	"959"	"50"	"36.000"	"29.000"	"0.00045476665315278"	"21"	"0"	"5.319E-05"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMTNINDGLLR"	"[R].smTNINDGLLR.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"739.89526"	"1478.78325"	"1478.78344"	"-0.13"	"-0.00010"	"9/106"	"9"	"106"	"1621933.34069824"	"HCD"	"MS2"	"0"	"78.8"	"100.000"	"54.9204"	"17329"	"17329"	"17309"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"97.9"	""	"106.9"	""	"95.3"	""	"186.1"	"0.8"	"134.8"	"124.1"	""	"947"	"39"	"36.000"	"29.000"	"0.00556313992263867"	"20"	"0.001374"	"0.01779"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLELDPEHQR"	"[K].lLELDPEHQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P54001"	"Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=P4ha1 PE=2 SV=2"	"P54001"	"Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=P4ha1 PE=2 SV=2"	"0"	"3"	"3"	"0.8679"	"0.0000"	"1"	"1"	"1"	"493.60977"	"1478.81476"	"1478.81646"	"-1.15"	"-0.00057"	"11/82"	"11"	"82"	"793911.885681152"	"HCD"	"MS2"	"17.07748"	"18.0"	"100.000"	"64.2152"	"21091"	"21091"	"21065"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.5"	""	"23.8"	""	"22.7"	""	"30.2"	"1.2"	"36.5"	"31.5"	""	"1006"	"53"	"37.000"	"30.000"	"0.000253260806220316"	"23"	"0"	"0.001312"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEGMVVADK"	"[R].aTEGMVVADk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"739.91803"	"1478.82878"	"1478.82889"	"-0.07"	"-0.00005"	"11/86"	"11"	"86"	"678000.630310059"	"HCD"	"MS2"	"76.54868"	"37.4"	"100.000"	"55.3938"	"17535"	"17535"	"17511"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.4"	""	"46.8"	""	"59.3"	""	"52.1"	""	"75.0"	"76.7"	""	"984"	"3"	"36.000"	"29.000"	"25.583803029449"	"13"	"0.0023"	"0.02326"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AENYDISPADR"	"[R].aENYDISPADR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.7193"	"0.0000"	"1"	"1"	"1"	"740.36731"	"1479.72734"	"1479.72770"	"-0.24"	"-0.00018"	"8/112"	"8"	"112"	"1002023.43359375"	"HCD"	"MS2"	"6.745011"	"58.7"	"100.000"	"45.6918"	"13570"	"13570"	"13552"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"111.0"	""	"70.1"	""	"80.8"	""	"84.7"	"0.1"	"104.6"	"104.3"	""	"605"	"57"	"34.000"	"27.000"	"6.09151585583372E-05"	""	"0"	"0.0001261"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AENYDISPADR"	"[R].aENYDISPADR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.6383"	"0.0000"	"1"	"1"	"1"	"740.36749"	"1479.72771"	"1479.72770"	"0.00"	"0.00000"	"8/112"	"8"	"112"	"747240.732910156"	"HCD"	"MS2"	"0"	"48.1"	"100.000"	"46.0025"	"13697"	"13697"	"13677"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.4"	""	"57.3"	""	"62.2"	""	"71.0"	"0.7"	"93.1"	"81.0"	""	"605"	"47"	"34.000"	"27.000"	"0.000621906905285203"	""	"0"	"2.499E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AENYDISPADR"	"[R].aENYDISPADR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"740.36768"	"1479.72807"	"1479.72770"	"0.25"	"0.00019"	"8/112"	"8"	"112"	"1062871.78320313"	"HCD"	"MS2"	"12.85294"	"62.6"	"100.000"	"45.5212"	"13513"	"13513"	"13491"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"123.2"	""	"74.8"	""	"78.7"	""	"91.8"	""	"121.3"	"106.8"	""	"612"	"48"	"34.000"	"27.000"	"0.000469592796736584"	""	"0"	"9.877E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AENYDISPADR"	"[R].aENYDISPADR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.6909"	"0.0000"	"1"	"1"	"1"	"740.36774"	"1479.72820"	"1479.72770"	"0.33"	"0.00025"	"8/112"	"8"	"112"	"908127.534790039"	"HCD"	"MS2"	"0"	"35.6"	"100.000"	"45.8135"	"13632"	"13632"	"13611"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"62.4"	""	"41.5"	""	"49.1"	""	"56.1"	""	"71.1"	"59.4"	""	"616"	"55"	"34.000"	"27.000"	"9.25871501209495E-05"	""	"0"	"3.294E-05"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IETIEVMEDR"	"[K].iETIEVmEDR.[Q]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"740.38263"	"1479.75798"	"1479.75623"	"1.19"	"0.00088"	"8/86"	"8"	"86"	"881229.185058594"	"HCD"	"MS2"	"0"	"50.5"	"100.000"	"61.9305"	"20151"	"20151"	"20141"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.4"	""	"44.7"	""	"37.6"	""	"118.8"	"1.4"	"109.6"	"109.7"	""	"844"	"38"	"36.000"	"29.000"	"0.00615619617836197"	"22"	"0.003111"	"0.03124"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSSNEELTK"	"[R].nSSNEELTk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZYR1"	"F-BAR domain only protein 2 OS=Rattus norvegicus OX=10116 GN=Fcho2 PE=1 SV=1"	"D3ZYR1"	"F-BAR domain only protein 2 OS=Rattus norvegicus OX=10116 GN=Fcho2 PE=1 SV=1"	"0"	"2"	"2"	"0.6757"	"0.0000"	"1"	"1"	"1"	"740.40564"	"1479.80400"	"1479.80551"	"-1.02"	"-0.00075"	"7/92"	"7"	"92"	"292682.946411133"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"34.4421"	"9014"	"9014"	"8983"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.2"	""	"20.2"	""	"24.0"	""	"56.6"	""	"65.9"	"60.4"	""	"1003"	"37"	"37.000"	"30.000"	"0.010122107313863"	"27"	"0"	"0.003318"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLMDEGTDAR"	"[K].lDLmDEGTDAR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"3"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"740.86029"	"1480.71330"	"1480.71509"	"-1.21"	"-0.00089"	"8/94"	"8"	"94"	"766868.509399414"	"HCD"	"MS2"	"5.597614"	"39.3"	"100.000"	"55.4210"	"17532"	"17532"	"17511"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.8"	""	"43.6"	""	"48.9"	""	"99.3"	""	"72.6"	"65.2"	""	"515"	"52"	"34.000"	"27.000"	"0.000176920123303665"	"19"	"0.0001301"	"0.004134"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLMDEGTDAR"	"[K].lDLmDEGTDAR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"3"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"740.86078"	"1480.71428"	"1480.71509"	"-0.55"	"-0.00040"	"7/94"	"7"	"94"	"850138.303039551"	"HCD"	"MS2"	"18.9359"	"44.6"	"100.000"	"55.1519"	"17436"	"17436"	"17416"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.1"	""	"50.8"	""	"43.7"	""	"119.3"	"3.0"	"82.2"	"77.8"	""	"524"	"40"	"34.000"	"27.000"	"0.00275614010941684"	"20"	"0.000936"	"0.01159"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"740.86938"	"1480.73149"	"1480.73372"	"-1.50"	"-0.00111"	"8/98"	"8"	"98"	"285290.071899414"	"HCD"	"MS2"	"59.0395"	"19.0"	"100.000"	"86.9743"	"30244"	"30244"	"30222"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.7"	""	"21.9"	""	"23.8"	""	"27.4"	""	"41.5"	"39.1"	""	"642"	"31"	"35.000"	"28.000"	"0.0252641698492127"	"20"	"0"	"0.0005264"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.7091"	"0.0000"	"1"	"1"	"1"	"494.24899"	"1480.73243"	"1480.73372"	"-0.87"	"-0.00043"	"12/98"	"12"	"98"	"1486390.82940674"	"HCD"	"MS2"	"16.97833"	"17.7"	"100.000"	"87.1319"	"30311"	"30311"	"30297"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.0"	""	"22.6"	""	"21.7"	""	"26.2"	"1.5"	"31.7"	"34.9"	""	"635"	"55"	"35.000"	"28.000"	"0.000112394155793991"	""	"0"	"8.128E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"740.87000"	"1480.73271"	"1480.73372"	"-0.68"	"-0.00050"	"7/98"	"7"	"98"	"460101.958190918"	"HCD"	"MS2"	"6.280194"	"24.0"	"100.000"	"87.5811"	"30487"	"30487"	"30476"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.4"	""	"21.0"	""	"29.7"	""	"31.7"	""	"54.1"	"57.2"	""	"635"	"54"	"35.000"	"28.000"	"0.000118506925100141"	"24"	"0"	"3.011E-05"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.6458"	"0.0000"	"1"	"1"	"1"	"494.24924"	"1480.73316"	"1480.73372"	"-0.38"	"-0.00019"	"13/98"	"13"	"98"	"1210129.1829834"	"HCD"	"MS2"	"14.7483"	"15.9"	"100.000"	"87.1113"	"30296"	"30296"	"30287"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.5"	""	"17.2"	""	"22.3"	""	"24.2"	""	"26.1"	"32.3"	""	"637"	"48"	"35.000"	"28.000"	"0.000496717472150384"	""	"0"	"0.0004496"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.5932"	"0.0000"	"1"	"1"	"1"	"494.24930"	"1480.73334"	"1480.73372"	"-0.25"	"-0.00012"	"14/98"	"14"	"98"	"1775226.17315674"	"HCD"	"MS2"	"6.522832"	"15.5"	"100.000"	"87.3895"	"30405"	"30405"	"30392"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.3"	""	"20.7"	""	"21.0"	""	"21.3"	""	"32.4"	"35.0"	""	"637"	"59"	"35.000"	"28.000"	"4.44743322996316E-05"	""	"0"	"7.332E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"740.87036"	"1480.73345"	"1480.73372"	"-0.18"	"-0.00013"	"10/98"	"10"	"98"	"3230983.80993652"	"HCD"	"MS2"	"1.337155"	"150.3"	"100.000"	"87.2505"	"30351"	"30351"	"30339"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"227.4"	""	"159.9"	""	"171.1"	""	"207.7"	""	"314.5"	"349.4"	""	"631"	"69"	"34.000"	"28.000"	"4.39540971329243E-06"	""	"0"	"4.424E-06"	"0.98"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"740.87054"	"1480.73381"	"1480.73372"	"0.06"	"0.00005"	"10/98"	"10"	"98"	"3458385.85705566"	"HCD"	"MS2"	"0.7773905"	"165.3"	"100.000"	"87.3035"	"30378"	"30378"	"30369"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"240.2"	""	"178.9"	""	"208.0"	""	"236.1"	"0.7"	"345.7"	"359.5"	""	"637"	"70"	"35.000"	"28.000"	"2.94516368399323E-06"	""	"0"	"1.575E-06"	"1.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"494.24951"	"1480.73398"	"1480.73372"	"0.18"	"0.00009"	"15/98"	"15"	"98"	"1889504.50811768"	"HCD"	"MS2"	"3.953025"	"17.5"	"100.000"	"87.3939"	"30413"	"30413"	"30407"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.5"	""	"21.9"	""	"14.1"	""	"29.2"	""	"34.1"	"37.8"	""	"639"	"60"	"35.000"	"28.000"	"3.33020418691161E-05"	""	"0"	"0.0001117"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"740.87073"	"1480.73418"	"1480.73372"	"0.31"	"0.00023"	"9/98"	"9"	"98"	"701775.82220459"	"HCD"	"MS2"	"24.9507"	"37.1"	"100.000"	"87.0413"	"30275"	"30275"	"30257"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.2"	""	"38.6"	""	"49.5"	""	"56.9"	""	"70.6"	"77.3"	""	"639"	"48"	"35.000"	"28.000"	"0.000543839643432187"	"23"	"0"	"6.369E-06"	"0.945"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.8413"	"0.0000"	"1"	"1"	"1"	"740.87091"	"1480.73454"	"1480.73372"	"0.56"	"0.00041"	"9/98"	"9"	"98"	"737002.32434082"	"HCD"	"MS2"	"3.309071"	"38.5"	"100.000"	"87.5306"	"30462"	"30462"	"30445"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.1"	""	"44.8"	""	"42.5"	""	"59.5"	""	"76.1"	"90.0"	""	"643"	"63"	"35.000"	"28.000"	"1.5928723634374E-05"	"26"	"0"	"7.113E-06"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMADEVNEK"	"[K].amADEVNEk.[Q]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"740.88818"	"1480.76909"	"1480.77177"	"-1.81"	"-0.00134"	"8/76"	"8"	"76"	"627255.442321777"	"HCD"	"MS2"	"0"	"41.2"	"100.000"	"32.6760"	"8301"	"8301"	"8275"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.8"	""	"26.5"	""	"26.9"	""	"115.0"	""	"99.1"	"103.0"	""	"856"	"37"	"36.000"	"29.000"	"0.0081553718728827"	"23"	"0.003717"	"0.0385"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMADEVNEK"	"[K].amADEVNEk.[Q]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"740.88824"	"1480.76921"	"1480.77177"	"-1.72"	"-0.00128"	"7/76"	"7"	"76"	"560451.563110352"	"HCD"	"MS2"	"0"	"42.8"	"100.000"	"32.6972"	"8303"	"8303"	"8273"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.0"	""	"28.5"	""	"24.2"	""	"107.9"	""	"105.2"	"112.7"	""	"856"	"35"	"36.000"	"29.000"	"0.013256954600647"	"23"	"0.005183"	"0.05871"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMPEQTGEK"	"[R].smPEQTGEk.[-]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.88855"	"1480.76982"	"1480.77177"	"-1.31"	"-0.00097"	"8/86"	"8"	"86"	"504636.035766602"	"HCD"	"MS2"	"0"	"31.8"	"100.000"	"24.8595"	"5134"	"5134"	"5113"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.7"	""	"30.9"	""	"33.1"	""	"80.5"	""	"63.4"	"55.6"	""	"840"	"33"	"36.000"	"29.000"	"0.021940639937963"	"15"	"0.005119"	"0.05774"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMADEVNEK"	"[K].amADEVNEk.[Q]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"740.88898"	"1480.77068"	"1480.77177"	"-0.73"	"-0.00054"	"8/76"	"8"	"76"	"496398.749694824"	"HCD"	"MS2"	"10.50123"	"36.6"	"100.000"	"32.9842"	"8419"	"8419"	"8401"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.1"	""	"25.0"	""	"15.9"	""	"94.0"	""	"94.6"	"100.0"	""	"855"	"40"	"36.000"	"29.000"	"0.00420664747712885"	"25"	"0.002937"	"0.02813"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMADEVNEK"	"[K].amADEVNEk.[Q]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"740.88940"	"1480.77153"	"1480.77177"	"-0.16"	"-0.00012"	"14/76"	"14"	"76"	"259227.098815918"	"HCD"	"MS2"	"0"	"21.2"	"100.000"	"33.0185"	"8440"	"8440"	"8411"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.0"	""	"12.3"	""	"7.7"	""	"53.9"	""	"57.1"	"58.3"	""	"865"	"29"	"36.000"	"29.000"	"0.0609517405317461"	"26"	"0.007627"	"0.09245"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYETELADAR"	"[K].aLYETELADAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"740.89490"	"1480.78252"	"1480.78449"	"-1.33"	"-0.00099"	"9/90"	"9"	"90"	"986488.804138184"	"HCD"	"MS2"	"42.12671"	"49.4"	"100.000"	"68.8331"	"22967"	"22967"	"22943"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.7"	""	"33.3"	""	"30.9"	""	"112.7"	""	"128.3"	"129.1"	""	"912"	"51"	"36.000"	"29.000"	"0.000374942648375864"	""	"0"	"9.363E-06"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYETELADAR"	"[K].aLYETELADAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.7544"	"0.0000"	"1"	"1"	"1"	"740.89520"	"1480.78313"	"1480.78449"	"-0.92"	"-0.00068"	"8/90"	"8"	"90"	"1087480.85534668"	"HCD"	"MS2"	"14.17891"	"55.4"	"100.000"	"69.1351"	"23090"	"23090"	"23070"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.8"	""	"42.3"	""	"31.9"	""	"104.2"	""	"146.1"	"158.5"	""	"901"	"57"	"36.000"	"29.000"	"9.26178713490856E-05"	""	"0"	"8.387E-06"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYETELADAR"	"[K].aLYETELADAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.7612"	"0.0000"	"1"	"1"	"1"	"740.89575"	"1480.78423"	"1480.78449"	"-0.18"	"-0.00013"	"10/90"	"10"	"90"	"1250176.0567627"	"HCD"	"MS2"	"14.08618"	"62.6"	"100.000"	"69.2562"	"23125"	"23125"	"23107"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.9"	""	"39.6"	""	"40.6"	""	"123.1"	"0.6"	"172.6"	"174.2"	""	"890"	"67"	"36.000"	"29.000"	"9.34028248212468E-06"	""	"0"	"2.989E-06"	"1.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYETELADAR"	"[K].aLYETELADAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.7170"	"0.0000"	"1"	"1"	"1"	"740.89624"	"1480.78520"	"1480.78449"	"0.48"	"0.00036"	"8/90"	"8"	"90"	"797881.895263672"	"HCD"	"MS2"	"35.42714"	"42.1"	"100.000"	"68.9658"	"23007"	"23007"	"22981"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.5"	""	"32.0"	""	"28.0"	""	"82.1"	""	"115.6"	"105.3"	""	"899"	"53"	"36.000"	"29.000"	"0.00023266427096178"	""	"0"	"9.321E-06"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLYVTAIEDR"	"[R].aTLYVTAIEDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.91376"	"1480.82024"	"1480.82087"	"-0.43"	"-0.00032"	"10/96"	"10"	"96"	"165831.405578613"	"HCD"	"MS2"	"37.73132"	"9.1"	"100.000"	"81.8125"	"28214"	"28214"	"28190"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.7"	""	"12.2"	""	"13.3"	""	"14.1"	""	"14.9"	"17.1"	""	"872"	"13"	"36.000"	"29.000"	"1.97009191747466"	"13"	"0.0007829"	"0.009409"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTAVVNGEFK"	"[K].gTAVVnGEFk.[E]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.92352"	"1480.83977"	"1480.84117"	"-0.94"	"-0.00070"	"12/92"	"12"	"92"	"282979.652099609"	"HCD"	"MS2"	"40.89971"	"23.4"	"100.000"	"63.1071"	"20640"	"20640"	"20618"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.0"	""	"29.3"	""	"29.9"	""	"32.2"	""	"50.5"	"46.6"	""	"797"	"36"	"36.000"	"29.000"	"0.0111282872073308"	"15"	"0"	"0.002504"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTAVVNGEFK"	"[K].gTAVVnGEFk.[E]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"2"	"2"	"0.9273"	"0.0000"	"1"	"1"	"1"	"740.92352"	"1480.83977"	"1480.84117"	"-0.94"	"-0.00070"	"9/92"	"9"	"92"	"847441.197143555"	"HCD"	"MS2"	"0"	"70.8"	"100.000"	"60.7548"	"19672"	"19672"	"19654"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"112.5"	""	"83.7"	""	"91.1"	""	"115.5"	"1.6"	"129.9"	"136.3"	""	"797"	"55"	"36.000"	"29.000"	"0.000138493160335117"	"20"	"0"	"1.928E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTAVVNGEFK"	"[K].gTAVVnGEFk.[E]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.92438"	"1480.84148"	"1480.84117"	"0.21"	"0.00016"	"12/92"	"12"	"92"	"346756.114807129"	"HCD"	"MS2"	"7.314913"	"29.2"	"100.000"	"60.8267"	"19717"	"19717"	"19689"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.3"	""	"35.6"	""	"36.9"	""	"44.1"	"0.3"	"64.5"	"54.1"	""	"785"	"35"	"35.000"	"28.000"	"0.0130568874667897"	"15"	"0"	"0.0009117"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTAVVNGEFK"	"[K].gTAVVnGEFk.[E]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.92444"	"1480.84160"	"1480.84117"	"0.29"	"0.00022"	"7/92"	"7"	"92"	"277857.465026855"	"HCD"	"MS2"	"39.26513"	"22.1"	"100.000"	"63.2536"	"20685"	"20685"	"20657"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.3"	""	"27.4"	""	"29.6"	""	"34.3"	""	"41.2"	"43.2"	""	"785"	"28"	"35.000"	"28.000"	"0.0587272495017066"	"14"	"0"	"0.003116"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTAVVNGEFK"	"[K].gTAVVnGEFk.[E]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.92590"	"1480.84453"	"1480.84117"	"2.27"	"0.00168"	"9/92"	"9"	"92"	"640509.233459473"	"HCD"	"MS2"	"27.94633"	"55.9"	"100.000"	"60.4474"	"19563"	"19563"	"19551"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.3"	""	"67.0"	""	"71.5"	""	"90.2"	"3.8"	"104.8"	"114.6"	""	"781"	"43"	"35.000"	"28.000"	"0.00209710916482584"	"15"	"0"	"0.0004348"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WNDFAEDSLR"	"[K].wNDFAEDSLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TA68"	"Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Opa1 PE=1 SV=1"	"Q2TA68"	"Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Opa1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"741.36462"	"1481.72197"	"1481.72222"	"-0.17"	"-0.00013"	"7/98"	"7"	"98"	"288915.674255371"	"HCD"	"MS2"	"21.6163"	"18.6"	"100.000"	"88.2141"	"30729"	"30729"	"30722"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.7"	""	"19.0"	""	"21.4"	""	"29.9"	"1.1"	"39.7"	"40.2"	""	"586"	"54"	"34.000"	"27.000"	"0.000108359656675618"	"16"	"0"	"0.0003587"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WNDFAEDSLR"	"[K].wNDFAEDSLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TA68"	"Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Opa1 PE=1 SV=1"	"Q2TA68"	"Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Opa1 PE=1 SV=1"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"741.36469"	"1481.72209"	"1481.72222"	"-0.09"	"-0.00006"	"14/98"	"14"	"98"	"373648.04699707"	"HCD"	"MS2"	"11.96344"	"23.1"	"100.000"	"88.2234"	"30738"	"30738"	"30727"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.9"	""	"28.9"	""	"32.8"	""	"36.1"	"0.8"	"40.6"	"51.1"	""	"586"	"47"	"34.000"	"27.000"	"0.000643972942725954"	"21"	"0"	"0.000185"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTEAVEAK"	"[K].eFTEAVEAk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"741.41608"	"1481.82488"	"1481.82518"	"-0.21"	"-0.00015"	"14/76"	"14"	"76"	"632787.524658203"	"HCD"	"MS2"	"9.671048"	"53.4"	"100.000"	"64.7341"	"21298"	"21298"	"21279"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.9"	""	"76.1"	""	"82.0"	""	"81.3"	""	"88.6"	"113.3"	""	"872"	"44"	"36.000"	"29.000"	"0.00183859675494862"	"22"	"0"	"0.00024"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTEAVEAK"	"[K].eFTEAVEAk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"741.41614"	"1481.82500"	"1481.82518"	"-0.12"	"-0.00009"	"13/76"	"13"	"76"	"597675.446044922"	"HCD"	"MS2"	"12.52028"	"53.3"	"100.000"	"64.9239"	"21360"	"21360"	"21335"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.7"	""	"68.2"	""	"60.4"	""	"97.4"	""	"101.7"	"116.1"	""	"872"	"36"	"36.000"	"29.000"	"0.0103391893566848"	"18"	"0"	"0.0004249"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIQEELQHLR"	"[R].sIQEELQHLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.8269"	"0.0000"	"1"	"1"	"1"	"494.61346"	"1481.82584"	"1481.82736"	"-1.02"	"-0.00051"	"13/94"	"13"	"94"	"2795168.02148438"	"HCD"	"MS2"	"18.03866"	"50.0"	"100.000"	"66.4756"	"21991"	"21991"	"21973"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"73.7"	""	"67.2"	""	"65.2"	""	"79.9"	""	"97.0"	"94.5"	""	"886"	"52"	"36.000"	"29.000"	"0.00030227604150476"	"25"	"0"	"0.0001348"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIQEELQHLR"	"[R].sIQEELQHLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"494.61346"	"1481.82584"	"1481.82736"	"-1.02"	"-0.00051"	"14/94"	"14"	"94"	"2889217.98468018"	"HCD"	"MS2"	"18.95335"	"50.1"	"100.000"	"66.4537"	"21998"	"21998"	"21981"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.9"	""	"51.2"	""	"75.2"	""	"76.4"	"0.8"	"102.4"	"99.1"	""	"886"	"60"	"36.000"	"29.000"	"4.63877946786549E-05"	"25"	"0"	"0.0001037"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIEDTAAEK"	"[R].fIEDTAAEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"741.41724"	"1481.82720"	"1481.82518"	"1.36"	"0.00101"	"8/74"	"8"	"74"	"1046709.50695801"	"HCD"	"MS2"	"54.34997"	"82.5"	"100.000"	"66.3106"	"21939"	"21939"	"21917"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"136.9"	""	"114.7"	""	"107.9"	""	"125.2"	""	"146.9"	"155.3"	""	"885"	"50"	"36.000"	"29.000"	"0.000407298935500778"	"27"	"0"	"0.0003604"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIEDTAAEK"	"[R].fIEDTAAEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"741.41736"	"1481.82744"	"1481.82518"	"1.52"	"0.00113"	"8/74"	"8"	"74"	"943570.000305176"	"HCD"	"MS2"	"52.48846"	"76.6"	"100.000"	"66.3972"	"21959"	"21959"	"21941"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"129.1"	""	"87.2"	""	"113.2"	""	"116.0"	""	"139.2"	"140.9"	""	"885"	"51"	"36.000"	"29.000"	"0.000380113483266138"	"28"	"0"	"0.0002383"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQYESVAAK"	"[R].qQYESVAAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"741.42120"	"1481.83513"	"1481.83641"	"-0.87"	"-0.00064"	"8/82"	"8"	"82"	"331381.197692871"	"HCD"	"MS2"	"0"	"31.6"	"100.000"	"43.4364"	"12660"	"12660"	"12634"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.8"	""	"42.5"	""	"43.2"	""	"36.9"	""	"59.8"	"73.1"	""	"851"	"34"	"36.000"	"29.000"	"0.0171751114707716"	"22"	"0"	"0.0006206"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQYESVAAK"	"[R].qQYESVAAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"741.42145"	"1481.83562"	"1481.83641"	"-0.54"	"-0.00040"	"14/82"	"14"	"82"	"1770377.07879639"	"HCD"	"MS2"	"47.23427"	"145.7"	"100.000"	"43.0108"	"12497"	"12497"	"12467"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"187.2"	""	"203.5"	""	"181.9"	""	"218.0"	"0.5"	"282.9"	"308.6"	""	"850"	"40"	"36.000"	"29.000"	"0.00410571623570671"	"23"	"0"	"0.0003005"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQYESVAAK"	"[R].qQYESVAAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"741.42175"	"1481.83623"	"1481.83641"	"-0.12"	"-0.00009"	"7/82"	"7"	"82"	"1357889.81384277"	"HCD"	"MS2"	"100"	"120.7"	"100.000"	"43.1238"	"12532"	"12532"	"12508"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"143.7"	""	"173.8"	""	"154.3"	""	"181.7"	""	"246.5"	"255.0"	""	"843"	"29"	"36.000"	"29.000"	"0.0485062363940079"	"18"	"0"	"0.0005216"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQYESVAAK"	"[R].qQYESVAAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"741.42181"	"1481.83635"	"1481.83641"	"-0.04"	"-0.00003"	"5/82"	"5"	"82"	"241978.183227539"	"HCD"	"MS2"	"25.45397"	"22.0"	"100.000"	"43.3806"	"12648"	"12648"	"12623"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.6"	""	"26.9"	""	"31.3"	""	"36.0"	""	"38.6"	"48.7"	""	"843"	"13"	"36.000"	"29.000"	"2.18674216408557"	"16"	"0.00912"	"0.1173"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDNSMGFGAER"	"[R].gPDNSmGFGAER.[K]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"741.84705"	"1482.68682"	"1482.68446"	"1.59"	"0.00118"	"5/120"	"5"	"120"	"254705.925964355"	"HCD"	"MS2"	"25.51722"	"17.7"	"100.000"	"33.9189"	"8805"	"8805"	"8779"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.6"	""	"23.2"	""	"23.8"	""	"27.0"	""	"33.7"	"31.7"	""	"374"	"12"	"32.000"	"25.000"	"1.07855328654351"	"14"	"0.005617"	"0.06381"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMEGAGTDEK"	"[K].amEGAGTDEk.[A]"	"N-Term(TMT6plex); M2(Oxidation); K10(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"741.87817"	"1482.74907"	"1482.75103"	"-1.32"	"-0.00098"	"6/84"	"6"	"84"	"267617.620666504"	"HCD"	"MS2"	"0"	"19.8"	"100.000"	"26.1930"	"5673"	"5673"	"5653"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.4"	""	"28.0"	""	"28.8"	""	"30.8"	""	"29.8"	"33.6"	""	"674"	"22"	"35.000"	"28.000"	"0.19126253202268"	"15"	"0.008777"	"0.1134"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMEGAGTDEK"	"[K].amEGAGTDEk.[A]"	"N-Term(TMT6plex); M2(Oxidation); K10(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"741.87854"	"1482.74980"	"1482.75103"	"-0.83"	"-0.00061"	"9/84"	"9"	"84"	"734618.310302734"	"HCD"	"MS2"	"0"	"57.0"	"100.000"	"25.8971"	"5554"	"5554"	"5528"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"82.9"	""	"70.1"	""	"67.3"	""	"129.6"	""	"93.8"	"99.1"	""	"687"	"36"	"35.000"	"28.000"	"0.00854922488830001"	"20"	"0.0003538"	"0.006091"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMEGAGTDEK"	"[K].amEGAGTDEk.[A]"	"N-Term(TMT6plex); M2(Oxidation); K10(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"741.87946"	"1482.75163"	"1482.75103"	"0.41"	"0.00030"	"7/84"	"7"	"84"	"559568.057373047"	"HCD"	"MS2"	"100"	"44.2"	"100.000"	"25.9961"	"5579"	"5579"	"5554"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.4"	""	"46.5"	""	"56.4"	""	"105.3"	""	"72.5"	"77.7"	""	"715"	"22"	"35.000"	"28.000"	"0.250193513570813"	"19"	"0.000936"	"0.01275"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEGEGSMTK"	"[K].lGEGEGSmTk.[E]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"741.89673"	"1482.78618"	"1482.78742"	"-0.83"	"-0.00062"	"11/84"	"11"	"84"	"343336.22644043"	"HCD"	"MS2"	"0"	"25.4"	"100.000"	"37.0045"	"10049"	"10049"	"10018"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.1"	""	"21.6"	""	"34.5"	""	"63.3"	""	"52.8"	"44.4"	""	"870"	"20"	"36.000"	"29.000"	"0.484718122112402"	"18"	"0.003449"	"0.03417"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEGEGSMTK"	"[K].lGEGEGSmTk.[E]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"741.89691"	"1482.78655"	"1482.78742"	"-0.59"	"-0.00043"	"14/84"	"14"	"84"	"452248.032165527"	"HCD"	"MS2"	"0"	"31.5"	"100.000"	"36.8174"	"9978"	"9978"	"9953"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.4"	""	"23.8"	""	"30.7"	""	"84.2"	""	"62.4"	"68.5"	""	"865"	"37"	"36.000"	"29.000"	"0.00843307789395355"	"23"	"0"	"0.002867"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDLTEPAQPAR"	"[R].gVDLTEPAQPAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"494.94168"	"1482.81049"	"1482.81137"	"-0.60"	"-0.00029"	"12/100"	"12"	"100"	"2229760.11621094"	"HCD"	"MS2"	"47.87896"	"53.4"	"100.000"	"51.0013"	"15745"	"15745"	"15726"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"62.3"	""	"59.4"	""	"69.8"	""	"88.7"	"1.5"	"117.8"	"107.7"	""	"903"	"23"	"36.000"	"29.000"	"0.215108590542645"	"20"	"0"	"0.0003349"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDLTEPAQPAR"	"[R].gVDLTEPAQPAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"741.90918"	"1482.81108"	"1482.81137"	"-0.20"	"-0.00014"	"10/100"	"10"	"100"	"3750242.50689697"	"HCD"	"MS2"	"27.26662"	"120.6"	"100.000"	"50.8148"	"15669"	"15669"	"15651"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"162.7"	""	"159.1"	""	"167.2"	""	"195.8"	"0.8"	"237.5"	"220.6"	""	"883"	"36"	"36.000"	"29.000"	"0.0114533018837546"	"18"	"0"	"6.424E-05"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDLTEPAQPAR"	"[R].gVDLTEPAQPAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"741.90930"	"1482.81133"	"1482.81137"	"-0.03"	"-0.00002"	"10/100"	"10"	"100"	"4542503.26605225"	"HCD"	"MS2"	"24.44283"	"150.1"	"100.000"	"51.2371"	"15830"	"15830"	"15810"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"210.5"	""	"199.3"	""	"217.5"	""	"239.4"	""	"281.6"	"275.0"	""	"883"	"37"	"36.000"	"29.000"	"0.00903505307113943"	"16"	"0"	"6.222E-05"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDLTEPAQPAR"	"[R].gVDLTEPAQPAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"494.94214"	"1482.81186"	"1482.81137"	"0.33"	"0.00016"	"14/100"	"14"	"100"	"2639479.79626465"	"HCD"	"MS2"	"36.63752"	"53.3"	"100.000"	"51.2737"	"15845"	"15845"	"15826"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.2"	""	"64.5"	""	"70.4"	""	"82.7"	"0.3"	"123.7"	"102.7"	""	"892"	"36"	"36.000"	"29.000"	"0.0122274208067984"	"21"	"0"	"0.0001612"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYEAALNSK"	"[R].eYEAALNSk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.5750"	"0.0000"	"1"	"1"	"1"	"741.91388"	"1482.82048"	"1482.82043"	"0.04"	"0.00003"	"13/82"	"13"	"82"	"355703.354125977"	"HCD"	"MS2"	"37.52136"	"30.8"	"100.000"	"56.0038"	"17770"	"17770"	"17741"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.9"	""	"21.2"	""	"15.2"	""	"56.6"	""	"83.6"	"95.6"	""	"888"	"40"	"36.000"	"29.000"	"0.00464925075334599"	""	"0"	"0.0002044"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYEAALNSK"	"[R].eYEAALNSk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"741.91406"	"1482.82085"	"1482.82043"	"0.28"	"0.00021"	"13/82"	"13"	"82"	"390377.413146973"	"HCD"	"MS2"	"27.70552"	"31.6"	"100.000"	"55.8107"	"17705"	"17705"	"17681"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.5"	""	"19.3"	""	"19.9"	""	"57.2"	""	"96.4"	"88.7"	""	"879"	"38"	"36.000"	"29.000"	"0.00688587095312531"	"29"	"0"	"0.0006305"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVDPNIQAVR"	"[K].lEVDPNIQAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.7805"	"0.0000"	"1"	"1"	"1"	"494.95358"	"1482.84620"	"1482.84776"	"-1.05"	"-0.00052"	"13/94"	"13"	"94"	"1797840.2598877"	"HCD"	"MS2"	"30.33629"	"32.2"	"100.000"	"76.0662"	"25900"	"25900"	"25886"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.6"	""	"32.7"	""	"44.8"	""	"57.5"	"0.6"	"61.8"	"61.8"	""	"748"	"41"	"35.000"	"28.000"	"0.00303299435637337"	"24"	"0"	"0.0008789"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVDPNIQAVR"	"[K].lEVDPNIQAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"494.95367"	"1482.84647"	"1482.84776"	"-0.87"	"-0.00043"	"14/94"	"14"	"94"	"1736214.79833984"	"HCD"	"MS2"	"27.6498"	"31.7"	"100.000"	"76.1827"	"25938"	"25938"	"25919"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.4"	""	"37.4"	""	"39.2"	""	"55.2"	""	"65.7"	"67.0"	""	"748"	"40"	"35.000"	"28.000"	"0.0038007701113364"	"21"	"0"	"0.0006883"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEASGPQLLPVR"	"[R].sEASGPQLLPVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1HCL7"	"NAD kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nadk2 PE=1 SV=1"	"Q1HCL7"	"NAD kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nadk2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"741.92688"	"1482.84648"	"1482.84776"	"-0.86"	"-0.00064"	"7/104"	"7"	"104"	"322025.917480469"	"HCD"	"MS2"	"13.1803"	"16.7"	"100.000"	"63.4780"	"20791"	"20791"	"20763"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.5"	""	"19.0"	""	"26.6"	""	"24.0"	""	"29.1"	"35.5"	""	"748"	"23"	"35.000"	"28.000"	"0.173329147981372"	"14"	"0"	"0.003221"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVDPNIQAVR"	"[K].lEVDPNIQAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"741.92719"	"1482.84709"	"1482.84776"	"-0.45"	"-0.00033"	"6/94"	"6"	"94"	"1877970.83288574"	"HCD"	"MS2"	"32.2729"	"74.7"	"100.000"	"75.8889"	"25828"	"25828"	"25808"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"119.7"	""	"102.8"	""	"99.3"	""	"124.3"	""	"127.6"	"138.7"	""	"737"	"42"	"35.000"	"28.000"	"0.00236830423831322"	"25"	"0"	"3.565E-05"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVDPNIQAVR"	"[K].lEVDPNIQAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.8246"	"0.0000"	"1"	"1"	"1"	"741.92725"	"1482.84722"	"1482.84776"	"-0.37"	"-0.00027"	"10/94"	"10"	"94"	"3351850.57928467"	"HCD"	"MS2"	"0"	"123.8"	"100.000"	"76.3167"	"25993"	"25993"	"25976"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"208.3"	""	"141.7"	""	"166.8"	""	"210.4"	"2.9"	"201.6"	"240.3"	""	"732"	"57"	"35.000"	"28.000"	"7.03851572781118E-05"	"26"	"0"	"4.361E-06"	"0.981"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEASGPQLLPVR"	"[R].sEASGPQLLPVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1HCL7"	"NAD kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nadk2 PE=1 SV=1"	"Q1HCL7"	"NAD kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nadk2 PE=1 SV=1"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"741.92743"	"1482.84758"	"1482.84776"	"-0.12"	"-0.00009"	"16/104"	"16"	"104"	"330754.867370605"	"HCD"	"MS2"	"41.63204"	"18.0"	"100.000"	"63.4334"	"20758"	"20758"	"20731"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.4"	""	"26.2"	""	"26.0"	""	"26.1"	""	"38.6"	"34.1"	""	"731"	"23"	"35.000"	"28.000"	"0.176965000351988"	"15"	"0"	"0.00123"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVDPNIQAVR"	"[K].lEVDPNIQAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.8305"	"0.0000"	"1"	"1"	"1"	"741.92749"	"1482.84770"	"1482.84776"	"-0.04"	"-0.00003"	"10/94"	"10"	"94"	"4395749.75524902"	"HCD"	"MS2"	"0.2666824"	"161.6"	"100.000"	"76.1795"	"25946"	"25946"	"25935"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"256.0"	""	"199.5"	""	"230.8"	""	"260.4"	""	"271.1"	"311.9"	""	"731"	"59"	"35.000"	"28.000"	"5.04530448712354E-05"	"26"	"0"	"4.008E-06"	"0.989"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVDPNIQAVR"	"[K].lEVDPNIQAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"741.92755"	"1482.84783"	"1482.84776"	"0.05"	"0.00003"	"10/94"	"10"	"94"	"2438348.99737549"	"HCD"	"MS2"	"20.3426"	"94.9"	"100.000"	"76.0234"	"25873"	"25873"	"25855"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"160.6"	""	"123.1"	""	"129.3"	""	"140.9"	""	"167.3"	"178.6"	""	"731"	"55"	"35.000"	"28.000"	"0.000103965053477221"	"26"	"0"	"1.239E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"742.36841"	"1483.72954"	"1483.73001"	"-0.32"	"-0.00024"	"14/82"	"14"	"82"	"289300.958740234"	"HCD"	"MS2"	"8.44726"	"15.7"	"100.000"	"84.3084"	"29199"	"29199"	"29185"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.3"	""	"19.7"	""	"21.2"	""	"16.3"	""	"34.2"	"35.3"	""	"572"	"40"	"34.000"	"27.000"	"0.003015546523679"	"15"	"0"	"0.0008038"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"742.36847"	"1483.72966"	"1483.73001"	"-0.24"	"-0.00017"	"7/82"	"7"	"82"	"303387.38494873"	"HCD"	"MS2"	"26.63356"	"17.3"	"100.000"	"83.7100"	"28962"	"28962"	"28947"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.9"	""	"26.3"	""	"24.9"	""	"17.4"	""	"40.1"	"34.9"	""	"572"	"40"	"34.000"	"27.000"	"0.00312151936224344"	"18"	"0"	"0.002221"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"742.36865"	"1483.73003"	"1483.73001"	"0.01"	"0.00001"	"11/82"	"11"	"82"	"210614.238037109"	"HCD"	"MS2"	"7.552615"	"13.5"	"100.000"	"84.3221"	"29205"	"29205"	"29190"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.6"	""	"20.4"	""	"16.4"	""	"13.5"	""	"24.6"	"32.6"	""	"568"	"28"	"34.000"	"27.000"	"0.0447011133508406"	"14"	"0.001211"	"0.01412"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"742.36877"	"1483.73027"	"1483.73001"	"0.18"	"0.00013"	"9/82"	"9"	"82"	"2804181.01776123"	"HCD"	"MS2"	"0.5794993"	"148.3"	"100.000"	"84.0061"	"29079"	"29079"	"29069"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"204.3"	""	"238.7"	""	"227.3"	""	"137.1"	""	"279.5"	"320.5"	""	"578"	"52"	"34.000"	"27.000"	"0.000170961312276712"	"17"	"0"	"5.897E-05"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9767"	"0.0000"	"1"	"1"	"1"	"742.36890"	"1483.73052"	"1483.73001"	"0.34"	"0.00025"	"9/82"	"9"	"82"	"2596768.73034668"	"HCD"	"MS2"	"0"	"133.0"	"100.000"	"84.0335"	"29089"	"29089"	"29072"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"197.9"	""	"204.5"	""	"207.4"	""	"125.5"	""	"248.2"	"281.1"	""	"578"	"43"	"34.000"	"27.000"	"0.00155202189151003"	"16"	"0"	"0.0001333"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"742.36896"	"1483.73064"	"1483.73001"	"0.42"	"0.00031"	"7/82"	"7"	"82"	"367747.758300781"	"HCD"	"MS2"	"6.778842"	"22.2"	"100.000"	"83.7374"	"28970"	"28970"	"28960"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.6"	""	"34.6"	""	"34.0"	""	"20.8"	"0.7"	"40.7"	"47.2"	""	"578"	"38"	"34.000"	"27.000"	"0.00415812789115939"	"16"	"0"	"0.000211"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFANGER.[W]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8431"	"0.0000"	"1"	"1"	"1"	"742.39032"	"1483.77336"	"1483.77426"	"-0.60"	"-0.00045"	"9/104"	"9"	"104"	"933630.541503906"	"HCD"	"MS2"	"0"	"42.9"	"100.000"	"72.7140"	"24548"	"24548"	"24529"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.6"	""	"59.7"	""	"59.4"	""	"64.2"	""	"72.7"	"76.0"	""	"843"	"51"	"36.000"	"29.000"	"0.000327942406263277"	"24"	"0"	"3.576E-05"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFANGER.[W]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"742.39044"	"1483.77361"	"1483.77426"	"-0.44"	"-0.00033"	"10/104"	"10"	"104"	"987160.509338379"	"HCD"	"MS2"	"1.887618"	"53.6"	"100.000"	"72.7919"	"24566"	"24566"	"24546"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.3"	""	"84.6"	""	"77.6"	""	"70.6"	"0.2"	"83.2"	"100.3"	""	"840"	"49"	"36.000"	"29.000"	"0.000521493969188812"	"25"	"0"	"4.404E-06"	"0.98"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVLNDDLPSR"	"[K].ePVLNDDLPSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"742.40100"	"1483.79473"	"1483.79539"	"-0.45"	"-0.00033"	"8/110"	"8"	"110"	"862653.522583008"	"HCD"	"MS2"	"53.12277"	"40.1"	"100.000"	"61.5197"	"20000"	"20000"	"19969"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.2"	""	"114.5"	""	"34.2"	""	"64.8"	""	"64.6"	"63.3"	""	"886"	"30"	"36.000"	"29.000"	"0.0443"	"21"	"0"	"0.000116"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVLNDDLPSR"	"[K].ePVLNDDLPSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"742.40112"	"1483.79497"	"1483.79539"	"-0.28"	"-0.00021"	"6/110"	"6"	"110"	"949060.546447754"	"HCD"	"MS2"	"54.19211"	"43.4"	"100.000"	"61.6687"	"20045"	"20045"	"20017"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.9"	""	"124.2"	""	"35.1"	""	"81.5"	""	"61.8"	"67.1"	""	"881"	"38"	"36.000"	"29.000"	"0.00717704902377797"	"23"	"0"	"4.3E-05"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVLNDDLPSR"	"[K].ePVLNDDLPSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"742.40167"	"1483.79607"	"1483.79539"	"0.46"	"0.00034"	"9/110"	"9"	"110"	"1304373.97412109"	"HCD"	"MS2"	"33.37939"	"102.7"	"100.000"	"61.9509"	"20159"	"20159"	"20147"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"122.2"	""	"147.4"	""	"102.5"	""	"170.6"	""	"214.4"	"221.6"	""	"885"	"16"	"36.000"	"29.000"	"1.1992597971117"	"18"	"0.001546"	"0.01939"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVLNDDLPSR"	"[K].ePVLNDDLPSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"742.40411"	"1483.80095"	"1483.79539"	"3.75"	"0.00278"	"8/110"	"8"	"110"	"1294099.159729"	"HCD"	"MS2"	"28.96509"	"96.3"	"100.000"	"61.8043"	"20115"	"20115"	"20101"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"111.1"	""	"140.8"	""	"98.3"	""	"188.0"	""	"183.4"	"199.1"	""	"851"	"10"	"36.000"	"29.000"	"4.12951991062956"	"18"	"0.00413"	"0.04547"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFAnGER.[W]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"742.88147"	"1484.75566"	"1484.75827"	"-1.76"	"-0.00131"	"4/104"	"4"	"104"	"109476.457580566"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"79.3611"	"27223"	"27223"	"27194"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.0"	""	"5.8"	""	"9.0"	""	"10.5"	""	"12.2"	"15.1"	""	"743"	"19"	"35.000"	"28.000"	"0.499987121531784"	"17"	"0.00736"	"0.08476"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFAnGER.[W]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"742.88190"	"1484.75652"	"1484.75827"	"-1.18"	"-0.00088"	"7/104"	"7"	"104"	"1077397.19000244"	"HCD"	"MS2"	"30.3007"	"67.5"	"100.000"	"78.4967"	"26880"	"26880"	"26863"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"112.6"	""	"79.0"	""	"80.5"	""	"123.7"	"0.2"	"109.5"	"133.5"	""	"747"	"41"	"35.000"	"28.000"	"0.00289928298060817"	"26"	"0"	"3.66E-05"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEFAIEGYDVR"	"[K].gEFAIEGYDVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G0"	"Src kinase-associated phosphoprotein 2 OS=Rattus norvegicus OX=10116 GN=Skap2 PE=1 SV=1"	"Q920G0"	"Src kinase-associated phosphoprotein 2 OS=Rattus norvegicus OX=10116 GN=Skap2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"742.88232"	"1484.75737"	"1484.75827"	"-0.61"	"-0.00045"	"6/94"	"6"	"94"	"227420.369384766"	"HCD"	"MS2"	"11.52797"	"12.0"	"100.000"	"80.9015"	"27846"	"27846"	"27827"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.3"	""	"13.9"	""	"18.9"	""	"15.6"	""	"25.9"	"25.3"	""	"763"	"41"	"35.000"	"28.000"	"0.00335347090170982"	"15"	"0"	"0.002226"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFAnGER.[W]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.6591"	"0.0000"	"1"	"1"	"1"	"742.88239"	"1484.75749"	"1484.75827"	"-0.53"	"-0.00039"	"7/104"	"7"	"104"	"382452.969665527"	"HCD"	"MS2"	"4.908138"	"19.9"	"100.000"	"77.7460"	"26581"	"26581"	"26565"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.3"	""	"27.5"	""	"34.4"	""	"34.1"	""	"29.0"	"35.5"	""	"761"	"44"	"35.000"	"28.000"	"0.00161940196197389"	""	"0"	"0.001479"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFAnGER.[W]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"742.88245"	"1484.75762"	"1484.75827"	"-0.44"	"-0.00033"	"8/104"	"8"	"104"	"940558.931884766"	"HCD"	"MS2"	"40.07819"	"57.3"	"100.000"	"78.5290"	"26887"	"26887"	"26868"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"89.1"	""	"65.3"	""	"68.9"	""	"100.3"	""	"106.1"	"118.1"	""	"761"	"44"	"35.000"	"28.000"	"0.00163815375292096"	"23"	"0"	"2.931E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFAnGER.[W]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"742.88251"	"1484.75774"	"1484.75827"	"-0.36"	"-0.00027"	"7/104"	"7"	"104"	"599409.36541748"	"HCD"	"MS2"	"5.270308"	"29.8"	"100.000"	"77.4415"	"26458"	"26458"	"26439"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.1"	""	"46.4"	""	"43.1"	""	"34.4"	""	"55.7"	"57.4"	""	"761"	"31"	"35.000"	"28.000"	"0.0314307439814116"	"23"	"0"	"0.002673"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFAnGER.[W]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"742.88257"	"1484.75786"	"1484.75827"	"-0.28"	"-0.00021"	"7/104"	"7"	"104"	"248214.426391602"	"HCD"	"MS2"	"4.918124"	"13.8"	"100.000"	"77.8720"	"26622"	"26622"	"26604"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.2"	""	"17.4"	""	"22.4"	""	"23.0"	""	"24.7"	"29.4"	""	"760"	"41"	"35.000"	"28.000"	"0.00306043807655645"	"24"	"0"	"0.001491"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFAnGER.[W]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"742.88263"	"1484.75798"	"1484.75827"	"-0.20"	"-0.00015"	"12/104"	"12"	"104"	"561404.925476074"	"HCD"	"MS2"	"12.94379"	"30.6"	"100.000"	"78.7712"	"26990"	"26990"	"26976"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.6"	""	"41.4"	""	"33.4"	""	"46.4"	""	"52.8"	"62.0"	""	"759"	"48"	"35.000"	"28.000"	"0.000594582031106043"	"23"	"0"	"0.0001204"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEFAIEGYDVR"	"[K].gEFAIEGYDVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G0"	"Src kinase-associated phosphoprotein 2 OS=Rattus norvegicus OX=10116 GN=Skap2 PE=1 SV=1"	"Q920G0"	"Src kinase-associated phosphoprotein 2 OS=Rattus norvegicus OX=10116 GN=Skap2 PE=1 SV=1"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"742.88275"	"1484.75823"	"1484.75827"	"-0.03"	"-0.00002"	"7/94"	"7"	"94"	"199863.383117676"	"HCD"	"MS2"	"13.6776"	"10.7"	"100.000"	"80.9645"	"27872"	"27872"	"27852"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.8"	""	"11.8"	""	"16.3"	""	"17.2"	""	"18.1"	"24.4"	""	"759"	"42"	"35.000"	"28.000"	"0.0022553387419461"	"17"	"0"	"0.002004"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFAnGER.[W]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.9423"	"0.0000"	"1"	"1"	"1"	"742.88275"	"1484.75823"	"1484.75827"	"-0.03"	"-0.00002"	"8/104"	"8"	"104"	"472487.455993652"	"HCD"	"MS2"	"11.33323"	"26.7"	"100.000"	"78.8173"	"27003"	"27003"	"26985"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.6"	""	"39.2"	""	"31.1"	""	"41.8"	""	"43.9"	"51.8"	""	"759"	"52"	"35.000"	"28.000"	"0.000220400096449338"	"18"	"0"	"7.982E-05"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFAnGER.[W]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"742.88293"	"1484.75859"	"1484.75827"	"0.21"	"0.00016"	"7/104"	"7"	"104"	"725062.076660156"	"HCD"	"MS2"	"0"	"36.1"	"100.000"	"77.5652"	"26498"	"26498"	"26477"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.7"	""	"52.7"	""	"50.0"	""	"52.4"	""	"64.6"	"64.5"	""	"761"	"42"	"35.000"	"28.000"	"0.00222000862176159"	"24"	"0"	"4.038E-05"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLQAETEPIVK"	"[K].QLQAETEPIVk.[M]"	"K11(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"742.92889"	"1484.85051"	"1484.85217"	"-1.12"	"-0.00083"	"5/104"	"5"	"104"	"212142.916381836"	"HCD"	"MS2"	"50.35278"	"8.2"	"100.000"	"84.5492"	"29294"	"29294"	"29270"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.2"	""	"9.8"	""	"13.3"	""	"12.7"	""	"13.1"	"16.1"	""	"713"	"31"	"35.000"	"28.000"	"0.0309784393040567"	"21"	"0.0008629"	"0.01117"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLQAETEPIVK"	"[K].QLQAETEPIVk.[M]"	"K11(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"742.93054"	"1484.85381"	"1484.85217"	"1.10"	"0.00082"	"6/104"	"6"	"104"	"248211.324401855"	"HCD"	"MS2"	"53.3642"	"8.6"	"100.000"	"84.5328"	"29289"	"29289"	"29272"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.9"	""	"11.8"	""	"19.8"	""	"8.9"	""	"15.6"	"17.0"	""	"703"	"28"	"35.000"	"28.000"	"0.0577996660710048"	"18"	"0.002973"	"0.02923"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEPGSPAEK"	"[R].lVEPGSPAEk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"742.93878"	"1484.87029"	"1484.87247"	"-1.47"	"-0.00109"	"7/84"	"7"	"84"	"471038.914672852"	"HCD"	"MS2"	"53.84303"	"38.8"	"100.000"	"55.4490"	"17558"	"17558"	"17527"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.3"	""	"52.8"	""	"46.6"	""	"65.0"	""	"76.4"	"79.5"	""	"646"	"43"	"35.000"	"28.000"	"0.00174663646311422"	""	"0.0001301"	"0.003993"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEPGSPAEK"	"[R].lVEPGSPAEk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"742.93896"	"1484.87065"	"1484.87247"	"-1.22"	"-0.00091"	"7/84"	"7"	"84"	"558884.965332031"	"HCD"	"MS2"	"37.98082"	"47.3"	"100.000"	"55.6560"	"17628"	"17628"	"17602"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.1"	""	"51.9"	""	"61.4"	""	"76.6"	""	"91.8"	"91.6"	""	"640"	"37"	"35.000"	"28.000"	"0.00626830295521916"	""	"0.0008629"	"0.009612"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMEDPFFVVK"	"[M].smEDPFFVVk.[G]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63635"	"Syntaxin-6 OS=Rattus norvegicus OX=10116 GN=Stx6 PE=1 SV=1"	"Q63635"	"Syntaxin-6 OS=Rattus norvegicus OX=10116 GN=Stx6 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.37695"	"1485.74663"	"1485.74968"	"-2.06"	"-0.00153"	"6/78"	"6"	"78"	"115393.890380859"	"HCD"	"MS2"	"30.61088"	"4.5"	"100.000"	"109.1386"	"37996"	"37996"	"37989"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.1"	""	"5.3"	""	"3.9"	""	"12.4"	""	"9.7"	"9.2"	""	"579"	"40"	"34.000"	"27.000"	"0.0027456714512561"	"15"	"0.001374"	"0.01695"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMEDPFFVVK"	"[M].smEDPFFVVk.[G]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63635"	"Syntaxin-6 OS=Rattus norvegicus OX=10116 GN=Stx6 PE=1 SV=1"	"Q63635"	"Syntaxin-6 OS=Rattus norvegicus OX=10116 GN=Stx6 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.37787"	"1485.74846"	"1485.74968"	"-0.82"	"-0.00061"	"5/78"	"5"	"78"	"127234.812744141"	"HCD"	"MS2"	"24.1636"	"4.2"	"100.000"	"109.1073"	"38076"	"38076"	"38069"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.3"	""	"3.0"	""	"4.8"	""	"11.9"	""	"9.5"	"9.1"	""	"576"	"23"	"34.000"	"27.000"	"0.155737245008327"	"14"	"0.00447"	"0.04875"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SASFNTDPYVR"	"[R].sASFNTDPYVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.37970"	"1485.75212"	"1485.75352"	"-0.94"	"-0.00070"	"6/104"	"6"	"104"	"379318.276672363"	"HCD"	"MS2"	"32.41857"	"25.7"	"100.000"	"56.4575"	"17955"	"17955"	"17930"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.3"	""	"33.9"	""	"25.6"	""	"46.1"	""	"54.3"	"53.9"	""	"605"	"18"	"34.000"	"27.000"	"0.503182326736976"	"14"	"0.0006732"	"0.009128"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SASFNTDPYVR"	"[R].sASFNTDPYVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"0.9714"	"0.0000"	"1"	"1"	"1"	"743.38068"	"1485.75408"	"1485.75352"	"0.37"	"0.00028"	"7/104"	"7"	"104"	"321851.316162109"	"HCD"	"MS2"	"13.75629"	"22.6"	"100.000"	"56.6030"	"18028"	"18028"	"18006"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.1"	""	"29.1"	""	"30.7"	""	"37.7"	"0.9"	"41.7"	"39.1"	""	"629"	"35"	"34.000"	"27.000"	"0.0105346630615137"	"15"	"0"	"0.001023"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SASFNTDPYVR"	"[R].sASFNTDPYVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"743.38245"	"1485.75762"	"1485.75352"	"2.75"	"0.00205"	"7/104"	"7"	"104"	"492660.513366699"	"HCD"	"MS2"	"25.79193"	"31.3"	"100.000"	"56.3081"	"17908"	"17908"	"17884"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.5"	""	"38.1"	""	"42.6"	""	"48.4"	""	"59.4"	"66.2"	""	"630"	"31"	"34.000"	"27.000"	"0.0245081513577538"	"20"	"0.0001301"	"0.004283"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSNTYTLTDVR"	"[R].sSNTYTLTDVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"2"	"2"	"0.8961"	"0.0000"	"1"	"1"	"1"	"743.39038"	"1485.77349"	"1485.77465"	"-0.79"	"-0.00058"	"8/112"	"8"	"112"	"1175856.54522705"	"HCD"	"MS2"	"0"	"60.0"	"100.000"	"49.8161"	"15263"	"15263"	"15238"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.7"	""	"78.8"	""	"78.2"	""	"98.8"	"1.0"	"114.8"	"117.8"	""	"722"	"77"	"35.000"	"28.000"	"6.53893773435676E-07"	"25"	"0"	"6.224E-07"	"1.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSNTYTLTDVR"	"[R].sSNTYTLTDVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"743.39142"	"1485.77556"	"1485.77465"	"0.61"	"0.00045"	"11/112"	"11"	"112"	"1057813.99700928"	"HCD"	"MS2"	"0"	"53.4"	"100.000"	"50.1717"	"15396"	"15396"	"15374"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.2"	""	"71.0"	""	"86.3"	""	"81.8"	"2.6"	"95.0"	"104.6"	""	"725"	"66"	"35.000"	"28.000"	"9.6008130024493E-06"	"24"	"0"	"2.973E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLEELNLGPR"	"[R].tDLEELNLGPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"0"	"2"	"2"	"0.7885"	"0.0000"	"1"	"1"	"1"	"743.40759"	"1485.80791"	"1485.81104"	"-2.11"	"-0.00156"	"8/96"	"8"	"96"	"605227.532287598"	"HCD"	"MS2"	"4.335127"	"29.5"	"100.000"	"82.2142"	"28374"	"28374"	"28363"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.9"	""	"39.1"	""	"36.8"	""	"47.1"	""	"60.8"	"53.1"	""	"821"	"52"	"36.000"	"29.000"	"0.000285307482370201"	"27"	"0"	"1.797E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLEELNLGPR"	"[R].tDLEELNLGPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"743.40857"	"1485.80986"	"1485.81104"	"-0.79"	"-0.00059"	"7/96"	"7"	"96"	"514124.301940918"	"HCD"	"MS2"	"19.25758"	"26.4"	"100.000"	"82.1348"	"28340"	"28340"	"28323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.4"	""	"33.8"	""	"36.8"	""	"42.0"	"1.5"	"49.4"	"54.2"	""	"812"	"37"	"36.000"	"29.000"	"0.0088211667861868"	"22"	"0"	"0.0005306"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLEELNLGPR"	"[R].tDLEELNLGPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"0"	"2"	"2"	"0.0938"	"0.0000"	"1"	"1"	"1"	"743.40955"	"1485.81182"	"1485.81104"	"0.52"	"0.00039"	"9/96"	"9"	"96"	"405978.188598633"	"HCD"	"MS2"	"4.708362"	"22.8"	"100.000"	"82.4282"	"28457"	"28457"	"28440"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.3"	""	"34.5"	""	"27.5"	""	"37.7"	""	"40.9"	"40.9"	""	"781"	"32"	"35.000"	"28.000"	"0.0225227303954674"	""	"0"	"0.0007045"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIEESTASK"	"[K].yIEESTASk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"743.41327"	"1485.81926"	"1485.82010"	"-0.56"	"-0.00042"	"7/74"	"7"	"74"	"343610.304321289"	"HCD"	"MS2"	"26.09924"	"32.1"	"100.000"	"47.1006"	"14156"	"14156"	"14126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.1"	""	"39.5"	""	"46.9"	""	"48.9"	"0.7"	"65.1"	"66.7"	""	"817"	"33"	"36.000"	"29.000"	"0.0206629374428272"	"20"	"0.001211"	"0.01463"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEIPEQFGPIR"	"[K].aEIPEQFGPIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"743.41498"	"1485.82268"	"1485.82629"	"-2.43"	"-0.00181"	"6/96"	"6"	"96"	"351085.157775879"	"HCD"	"MS2"	"6.652097"	"21.6"	"100.000"	"82.5051"	"28491"	"28491"	"28469"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.2"	""	"27.9"	""	"28.8"	""	"34.3"	""	"44.1"	"37.5"	""	"828"	"16"	"36.000"	"29.000"	"1.08143480072127"	"23"	"0.009594"	"0.1255"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEIPEQFGPIR"	"[K].aEIPEQFGPIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"743.41718"	"1485.82707"	"1485.82629"	"0.52"	"0.00039"	"6/96"	"6"	"96"	"209187.406188965"	"HCD"	"MS2"	"8.845369"	"13.0"	"100.000"	"82.6756"	"28556"	"28556"	"28538"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.2"	""	"17.8"	""	"17.1"	""	"22.1"	""	"24.1"	"29.3"	""	"795"	"21"	"35.000"	"29.000"	"0.29399309683565"	"21"	"0.003449"	"0.03506"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDFSEFDNLR"	"[K].dDFSEFDNLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1Z3"	"Epsin-2 OS=Rattus norvegicus OX=10116 GN=Epn2 PE=1 SV=1"	"Q9Z1Z3"	"Epsin-2 OS=Rattus norvegicus OX=10116 GN=Epn2 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"743.85352"	"1486.69975"	"1486.70115"	"-0.94"	"-0.00070"	"10/88"	"10"	"88"	"181630.805725098"	"HCD"	"MS2"	"27.12589"	"12.1"	"100.000"	"87.0578"	"30276"	"30276"	"30268"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.5"	""	"12.3"	""	"8.9"	""	"32.0"	""	"24.3"	"24.0"	""	"347"	"20"	"32.000"	"25.000"	"0.166073171369655"	"17"	"0.0003538"	"0.006754"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEFATGNDR"	"[R].yLAEFATGnDR.[K]"	"N-Term(TMT6plex); N9(Deamidated)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"743.87201"	"1486.73674"	"1486.73754"	"-0.54"	"-0.00040"	"4/96"	"4"	"96"	"138894.529174805"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"79.0617"	"27102"	"27102"	"27080"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.7"	""	"13.8"	""	"11.8"	""	"21.0"	""	"18.4"	"21.2"	""	"538"	"13"	"34.000"	"27.000"	"1.37325844993384"	"14"	"0.001374"	"0.01741"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEFATGNDR"	"[R].yLAEFATGnDR.[K]"	"N-Term(TMT6plex); N9(Deamidated)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.87341"	"1486.73955"	"1486.73754"	"1.35"	"0.00101"	"4/96"	"4"	"96"	"130158.25378418"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"79.0988"	"27121"	"27121"	"27097"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.3"	""	"11.1"	""	"9.4"	""	"14.7"	""	"20.4"	"20.1"	""	"546"	"11"	"34.000"	"27.000"	"2.27071509511029"	"13"	"0.000936"	"0.01319"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLISEGEEPR"	"[K].lDLISEGEEPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"743.89966"	"1486.79204"	"1486.79505"	"-2.03"	"-0.00151"	"11/94"	"11"	"94"	"497416.487792969"	"HCD"	"MS2"	"0"	"27.0"	"100.000"	"82.0941"	"28327"	"28327"	"28311"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.8"	""	"32.8"	""	"30.6"	""	"45.1"	""	"60.5"	"55.2"	""	"793"	"29"	"35.000"	"28.000"	"0.0484443565255372"	"20"	"0"	"0.0005375"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLISEGEEPR"	"[K].lDLISEGEEPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"743.90015"	"1486.79302"	"1486.79505"	"-1.37"	"-0.00102"	"8/94"	"8"	"94"	"297852.683654785"	"HCD"	"MS2"	"0"	"16.4"	"100.000"	"81.4760"	"28076"	"28076"	"28059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.7"	""	"15.5"	""	"15.3"	""	"30.5"	""	"41.5"	"40.9"	""	"804"	"56"	"36.000"	"29.000"	"0.000104526414439244"	"22"	"0"	"0.0002775"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLISEGEEPR"	"[K].lDLISEGEEPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"743.90015"	"1486.79302"	"1486.79505"	"-1.37"	"-0.00102"	"9/94"	"9"	"94"	"441035.189758301"	"HCD"	"MS2"	"5.961192"	"23.7"	"100.000"	"82.0403"	"28302"	"28302"	"28287"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.8"	""	"23.0"	""	"22.6"	""	"42.6"	"0.7"	"57.2"	"52.8"	""	"804"	"35"	"36.000"	"29.000"	"0.0139388213881918"	"22"	"0"	"0.0001316"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLISEGEEPR"	"[K].lDLISEGEEPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"743.90106"	"1486.79485"	"1486.79505"	"-0.14"	"-0.00010"	"9/94"	"9"	"94"	"1955674.62182617"	"HCD"	"MS2"	"5.280749"	"82.7"	"100.000"	"81.7543"	"28188"	"28188"	"28178"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"71.6"	""	"67.5"	""	"66.0"	""	"159.0"	""	"211.0"	"214.5"	""	"781"	"65"	"35.000"	"28.000"	"1.38235961693081E-05"	""	"0"	"1.387E-06"	"1.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLISEGEEPR"	"[K].lDLISEGEEPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7969"	"0.0000"	"1"	"1"	"1"	"743.90118"	"1486.79509"	"1486.79505"	"0.03"	"0.00002"	"9/94"	"9"	"94"	"2011242.74755859"	"HCD"	"MS2"	"4.325219"	"86.5"	"100.000"	"81.7897"	"28205"	"28205"	"28190"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.4"	""	"81.0"	""	"69.8"	""	"167.8"	""	"221.6"	"220.8"	""	"781"	"64"	"35.000"	"28.000"	"1.40159015478875E-05"	""	"0"	"5.541E-06"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLISEGEEPR"	"[K].lDLISEGEEPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"743.90186"	"1486.79643"	"1486.79505"	"0.93"	"0.00069"	"7/94"	"7"	"94"	"269472.361572266"	"HCD"	"MS2"	"0"	"16.3"	"100.000"	"81.4998"	"28088"	"28088"	"28065"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.1"	""	"19.1"	""	"12.5"	""	"27.9"	""	"36.7"	"40.6"	""	"791"	"55"	"35.000"	"28.000"	"0.000114589938893587"	""	"0"	"2.061E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVTDDPLLSR"	"[R].lEVTDDPLLSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI43"	"Matrix remodeling-associated protein 8 OS=Rattus norvegicus OX=10116 GN=Mxra8 PE=1 SV=1"	"Q5XI43"	"Matrix remodeling-associated protein 8 OS=Rattus norvegicus OX=10116 GN=Mxra8 PE=1 SV=1"	"0"	"2"	"2"	"0.0667"	"0.0000"	"1"	"1"	"1"	"743.91852"	"1486.82976"	"1486.83144"	"-1.13"	"-0.00084"	"6/96"	"6"	"96"	"303397.651916504"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"91.0267"	"31817"	"31817"	"31797"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.3"	""	"15.0"	""	"16.6"	""	"20.0"	""	"27.4"	"31.4"	""	"841"	"30"	"36.000"	"29.000"	"0.0412825010039903"	""	"0"	"0.001965"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVTDDPLLSR"	"[R].lEVTDDPLLSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI43"	"Matrix remodeling-associated protein 8 OS=Rattus norvegicus OX=10116 GN=Mxra8 PE=1 SV=1"	"Q5XI43"	"Matrix remodeling-associated protein 8 OS=Rattus norvegicus OX=10116 GN=Mxra8 PE=1 SV=1"	"0"	"2"	"2"	"0.0938"	"0.0000"	"1"	"1"	"1"	"743.91937"	"1486.83147"	"1486.83144"	"0.02"	"0.00001"	"13/96"	"13"	"96"	"279522.045227051"	"HCD"	"MS2"	"0"	"13.4"	"100.000"	"91.0898"	"31846"	"31846"	"31827"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.2"	""	"12.9"	""	"18.0"	""	"25.4"	""	"26.2"	"31.0"	""	"821"	"32"	"36.000"	"29.000"	"0.0256043149965533"	""	"0.0007829"	"0.009366"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPTIEDSYR"	"[K].yDPTIEDSYR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"P62836"	"Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.36401"	"1487.72075"	"1487.72155"	"-0.54"	"-0.00040"	"9/84"	"9"	"84"	"1614770.11468506"	"HCD"	"MS2"	"22.86265"	"86.4"	"100.000"	"59.1913"	"19069"	"19069"	"19048"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"100.9"	""	"106.2"	""	"92.7"	""	"153.6"	"0.2"	"182.8"	"184.6"	""	"435"	"47"	"33.000"	"26.000"	"0.000470391278910627"	"15"	"0"	"2.285E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPTIEDSYR"	"[K].yDPTIEDSYR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"P62836"	"Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.36444"	"1487.72161"	"1487.72155"	"0.03"	"0.00003"	"9/84"	"9"	"84"	"5625185.31915283"	"HCD"	"MS2"	"0"	"235.5"	"95.257"	"59.2562"	"19111"	"19111"	"19094"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"298.8"	""	"244.4"	""	"236.6"	""	"412.2"	"0.1"	"539.4"	"508.6"	""	"436"	"46"	"33.000"	"26.000"	"0.000529001000727967"	"16"	"0"	"0.0001255"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPTIEDSYR"	"[K].yDPTIEDSYR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"P62836"	"Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.36462"	"1487.72197"	"1487.72155"	"0.28"	"0.00021"	"9/84"	"9"	"84"	"5784114.14196777"	"HCD"	"MS2"	"0"	"258.3"	"100.000"	"59.4883"	"19191"	"19191"	"19174"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"352.3"	""	"259.1"	""	"278.9"	""	"426.6"	"0.4"	"595.6"	"543.3"	""	"438"	"45"	"33.000"	"26.000"	"0.0007135823751944"	"15"	"0"	"0.0001446"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPTIEDSYR"	"[K].yDPTIEDSYR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"P62836"	"Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.36475"	"1487.72222"	"1487.72155"	"0.44"	"0.00033"	"9/84"	"9"	"84"	"2097002.4776001"	"HCD"	"MS2"	"14.9711"	"102.3"	"100.000"	"58.9707"	"18994"	"18994"	"18975"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"129.2"	""	"116.0"	""	"116.7"	""	"180.0"	""	"217.9"	"214.1"	""	"436"	"43"	"33.000"	"26.000"	"0.00100105166798437"	"15"	"0"	"6.339E-05"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9057"	"0.0000"	"1"	"1"	"1"	"744.36920"	"1487.73113"	"1487.73279"	"-1.12"	"-0.00083"	"10/104"	"10"	"104"	"1415267.01702881"	"HCD"	"MS2"	"32.54924"	"81.5"	"100.000"	"71.8314"	"24188"	"24188"	"24168"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"99.3"	""	"114.1"	""	"117.3"	""	"143.5"	"1.6"	"147.3"	"148.8"	""	"492"	"53"	"33.000"	"26.000"	"0.00011296271115787"	"21"	"0"	"9.669E-07"	"1.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.58203"	"1487.73154"	"1487.73279"	"-0.84"	"-0.00042"	"16/104"	"16"	"104"	"2423889.74188232"	"HCD"	"MS2"	"5.403399"	"28.9"	"100.000"	"72.4504"	"24427"	"24427"	"24409"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.0"	""	"36.4"	""	"39.2"	""	"52.6"	""	"58.0"	"54.7"	""	"494"	"47"	"33.000"	"26.000"	"0.000462058488670353"	"16"	"0"	"4.595E-05"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9672"	"0.0000"	"1"	"1"	"1"	"496.58203"	"1487.73154"	"1487.73279"	"-0.84"	"-0.00042"	"15/104"	"15"	"104"	"4311493.23791504"	"HCD"	"MS2"	"10.82169"	"46.8"	"100.000"	"72.0178"	"24264"	"24264"	"24246"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.1"	""	"62.6"	""	"57.4"	""	"84.3"	""	"83.7"	"90.7"	""	"494"	"61"	"33.000"	"26.000"	"2.11688347771901E-05"	"18"	"0"	"7.78E-06"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9672"	"0.0000"	"1"	"1"	"1"	"496.58209"	"1487.73172"	"1487.73279"	"-0.72"	"-0.00035"	"14/104"	"14"	"104"	"2895780.53540039"	"HCD"	"MS2"	"2.521507"	"30.5"	"100.000"	"72.3288"	"24391"	"24391"	"24373"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.9"	""	"35.8"	""	"48.6"	""	"55.5"	""	"51.6"	"57.6"	""	"491"	"61"	"33.000"	"26.000"	"2.0466873082412E-05"	"18"	"0"	"6.171E-05"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"744.36951"	"1487.73174"	"1487.73279"	"-0.71"	"-0.00053"	"10/104"	"10"	"104"	"1312160.7935791"	"HCD"	"MS2"	"17.30354"	"76.2"	"100.000"	"71.9505"	"24223"	"24223"	"24206"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"95.7"	""	"91.0"	""	"115.4"	""	"140.4"	"0.8"	"138.6"	"140.1"	""	"491"	"62"	"33.000"	"26.000"	"1.62948923783669E-05"	"20"	"0"	"2.75E-06"	"1.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"496.58215"	"1487.73191"	"1487.73279"	"-0.59"	"-0.00029"	"13/104"	"13"	"104"	"4079238.83111572"	"HCD"	"MS2"	"47.40744"	"45.4"	"100.000"	"72.1395"	"24300"	"24300"	"24282"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.3"	""	"58.5"	""	"65.5"	""	"73.8"	"1.4"	"78.0"	"94.8"	""	"490"	"58"	"33.000"	"26.000"	"3.99177527996732E-05"	"18"	"0"	"1.174E-05"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9692"	"0.0000"	"1"	"1"	"1"	"744.36969"	"1487.73210"	"1487.73279"	"-0.46"	"-0.00034"	"10/104"	"10"	"104"	"39886216.3508301"	"HCD"	"MS2"	"0"	"347.2"	"19.160"	"72.1285"	"24310"	"24310"	"24293"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"431.3"	""	"453.1"	""	"524.4"	""	"598.5"	""	"597.7"	"687.7"	""	"490"	"65"	"33.000"	"26.000"	"6.98499475538457E-06"	"18"	"0"	"1.166E-06"	"1.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9855"	"0.0000"	"1"	"1"	"1"	"744.37006"	"1487.73284"	"1487.73279"	"0.03"	"0.00002"	"10/104"	"10"	"104"	"4043296.49786377"	"HCD"	"MS2"	"0"	"211.3"	"100.000"	"72.4397"	"24437"	"24437"	"24420"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"268.9"	""	"266.2"	""	"320.9"	""	"349.3"	"2.1"	"383.8"	"411.5"	""	"497"	"69"	"33.000"	"26.000"	"3.32143985861791E-06"	"18"	"0"	"2.056E-07"	"1.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9828"	"0.0000"	"1"	"1"	"1"	"744.37012"	"1487.73296"	"1487.73279"	"0.11"	"0.00008"	"10/104"	"10"	"104"	"4276539.79779053"	"HCD"	"MS2"	"0"	"209.5"	"100.000"	"72.5589"	"24472"	"24472"	"24456"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"258.3"	""	"257.5"	""	"334.8"	""	"357.4"	"2.6"	"361.8"	"412.9"	""	"498"	"58"	"33.000"	"26.000"	"3.52532651209314E-05"	"17"	"0"	"1.576E-06"	"1.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9851"	"0.0000"	"1"	"1"	"1"	"744.37140"	"1487.73552"	"1487.73279"	"1.84"	"0.00137"	"10/104"	"10"	"104"	"36815867.3483887"	"HCD"	"MS2"	"0"	"424.4"	"24.572"	"72.2524"	"24347"	"24347"	"24330"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"539.0"	""	"523.1"	""	"655.4"	""	"761.3"	""	"734.6"	"809.5"	""	"524"	"67"	"34.000"	"27.000"	"5.44880532021169E-06"	"18"	"0"	"2.765E-06"	"1.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.6538"	"0.0000"	"1"	"1"	"3"	"496.62842"	"1487.87070"	"1487.87213"	"-0.96"	"-0.00048"	"8/78"	"8"	"78"	"847607.768554688"	"HCD"	"MS2"	"26.09407"	"26.8"	"100.000"	"80.2657"	"27587"	"27587"	"27566"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.4"	""	"34.8"	""	"37.3"	""	"47.1"	""	"48.3"	"53.8"	""	"854"	"26"	"36.000"	"29.000"	"0.102666291560296"	"23"	"0.007147"	"0.08232"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"496.62842"	"1487.87070"	"1487.87213"	"-0.96"	"-0.00048"	"8/78"	"8"	"78"	"1169077.29241943"	"HCD"	"MS2"	"4.614383"	"36.1"	"100.000"	"80.5604"	"27707"	"27707"	"27691"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.3"	""	"37.9"	""	"48.5"	""	"66.6"	""	"64.3"	"79.5"	""	"854"	"22"	"36.000"	"29.000"	"0.259673645546013"	"21"	"0.0008629"	"0.01098"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"496.62848"	"1487.87088"	"1487.87213"	"-0.84"	"-0.00042"	"8/78"	"8"	"78"	"1294969.94061279"	"HCD"	"MS2"	"4.471523"	"38.1"	"100.000"	"80.5847"	"27718"	"27718"	"27706"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.8"	""	"35.2"	""	"57.5"	""	"74.7"	""	"66.6"	"80.9"	""	"852"	"22"	"36.000"	"29.000"	"0.259065510544734"	"16"	"0.006308"	"0.07144"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"744.43915"	"1487.87102"	"1487.87213"	"-0.75"	"-0.00056"	"13/78"	"13"	"78"	"1973682.83709717"	"HCD"	"MS2"	"2.348376"	"123.5"	"100.000"	"80.5798"	"27716"	"27716"	"27706"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"152.2"	""	"144.8"	""	"172.4"	""	"240.6"	"0.1"	"210.9"	"249.7"	""	"852"	"40"	"36.000"	"29.000"	"0.00432921943162917"	"22"	"0.0002479"	"0.005787"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"744.43921"	"1487.87114"	"1487.87213"	"-0.67"	"-0.00049"	"8/78"	"8"	"78"	"1554599.3638916"	"HCD"	"MS2"	"1.380347"	"100.4"	"100.000"	"80.5996"	"27723"	"27723"	"27705"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"129.5"	""	"113.5"	""	"148.2"	""	"186.6"	""	"161.0"	"213.9"	""	"860"	"52"	"36.000"	"29.000"	"0.000257316985875938"	"25"	"0"	"0.002226"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"744.43951"	"1487.87175"	"1487.87213"	"-0.26"	"-0.00019"	"7/78"	"7"	"78"	"401496.258056641"	"HCD"	"MS2"	"12.8318"	"27.2"	"100.000"	"80.8653"	"27832"	"27832"	"27813"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.6"	""	"28.7"	""	"44.8"	""	"45.4"	"1.5"	"49.1"	"56.0"	""	"828"	"37"	"36.000"	"29.000"	"0.00779830723048777"	"21"	"0"	"0.00366"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"744.43958"	"1487.87187"	"1487.87213"	"-0.17"	"-0.00013"	"8/78"	"8"	"78"	"1410273.35656738"	"HCD"	"MS2"	"2.048506"	"98.1"	"100.000"	"80.3054"	"27606"	"27606"	"27594"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"130.9"	""	"110.8"	""	"137.4"	""	"197.5"	""	"164.7"	"188.6"	""	"828"	"50"	"36.000"	"29.000"	"0.000378442881968683"	"24"	"0"	"0.002929"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"744.43970"	"1487.87212"	"1487.87213"	"-0.01"	"-0.00001"	"14/78"	"14"	"78"	"1580795.01116943"	"HCD"	"MS2"	"0"	"103.9"	"100.000"	"80.2956"	"27599"	"27599"	"27581"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"144.5"	""	"128.6"	""	"150.1"	""	"191.2"	"0.2"	"174.3"	"194.9"	""	"829"	"43"	"36.000"	"29.000"	"0.00201152083317199"	"20"	"0"	"0.00226"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.6800"	"0.0000"	"1"	"1"	"1"	"496.62891"	"1487.87217"	"1487.87213"	"0.02"	"0.00001"	"8/78"	"8"	"78"	"797815.59173584"	"HCD"	"MS2"	"30.63633"	"25.4"	"100.000"	"80.2915"	"27601"	"27601"	"27579"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.5"	""	"33.5"	""	"35.0"	""	"50.5"	""	"44.5"	"51.5"	""	"829"	"25"	"36.000"	"29.000"	"0.132899863500751"	"22"	"0.004867"	"0.05224"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGTDSYAITFR"	"[R].eGTDSYAITFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.87915"	"1488.75102"	"1488.75319"	"-1.45"	"-0.00108"	"7/96"	"7"	"96"	"267027.856811523"	"HCD"	"MS2"	"9.160274"	"20.2"	"100.000"	"68.8354"	"22968"	"22968"	"22943"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.9"	""	"25.1"	""	"31.4"	""	"34.5"	""	"30.4"	"36.6"	""	"608"	"37"	"34.000"	"27.000"	"0.00679005955740482"	"15"	"0.000936"	"0.01187"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGTDSYAITFR"	"[R].eGTDSYAITFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"744.88007"	"1488.75286"	"1488.75319"	"-0.22"	"-0.00017"	"6/96"	"6"	"96"	"236202.37512207"	"HCD"	"MS2"	"0"	"17.2"	"100.000"	"68.9912"	"23017"	"23017"	"22996"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.6"	""	"21.0"	""	"29.7"	""	"20.1"	"1.4"	"30.7"	"33.7"	""	"595"	"34"	"34.000"	"27.000"	"0.0125454709770003"	"19"	"0.0006732"	"0.008147"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEQGTVLIGSER"	"[R].aEQGTVLIGSER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHU4"	"Elongator complex protein 1 OS=Rattus norvegicus OX=10116 GN=Elp1 PE=2 SV=1"	"Q8VHU4"	"Elongator complex protein 1 OS=Rattus norvegicus OX=10116 GN=Elp1 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"744.91351"	"1488.81975"	"1488.82194"	"-1.47"	"-0.00109"	"6/124"	"6"	"124"	"277905.008117676"	"HCD"	"MS2"	"26.73813"	"20.1"	"100.000"	"49.3744"	"15071"	"15071"	"15043"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.0"	""	"30.9"	""	"30.2"	""	"28.8"	""	"33.9"	"40.3"	""	"913"	"16"	"36.000"	"29.000"	"1.18697284058495"	"17"	"0.002973"	"0.03017"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEQGTVLIGSER"	"[R].aEQGTVLIGSER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHU4"	"Elongator complex protein 1 OS=Rattus norvegicus OX=10116 GN=Elp1 PE=2 SV=1"	"Q8VHU4"	"Elongator complex protein 1 OS=Rattus norvegicus OX=10116 GN=Elp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"744.91565"	"1488.82402"	"1488.82194"	"1.40"	"0.00104"	"8/124"	"8"	"124"	"291121.221923828"	"HCD"	"MS2"	"0"	"21.2"	"100.000"	"48.9660"	"14917"	"14917"	"14895"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.1"	""	"31.1"	""	"30.7"	""	"27.8"	""	"42.7"	"38.9"	""	"935"	"46"	"36.000"	"29.000"	"0.00122118543318163"	"22"	"0"	"0.0001222"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QELEAELAK"	"[R].qELEAELAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.3158"	"0.0000"	"1"	"1"	"1"	"744.93781"	"1488.86833"	"1488.86738"	"0.64"	"0.00048"	"8/88"	"8"	"88"	"260436.16784668"	"HCD"	"MS2"	"19.33618"	"23.3"	"100.000"	"70.8935"	"23807"	"23807"	"23779"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.6"	""	"26.4"	""	"28.4"	""	"34.4"	""	"47.8"	"48.6"	""	"871"	"38"	"36.000"	"29.000"	"0.00767340568212264"	""	"0"	"0.001338"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDMAAAmk.[AN]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"745.37463"	"1489.74199"	"1489.74311"	"-0.75"	"-0.00056"	"8/66"	"8"	"66"	"931884.945678711"	"HCD"	"MS2"	"4.83776"	"73.2"	"100.000"	"52.1362"	"16208"	"16208"	"16188"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"125.4"	""	"100.3"	""	"113.2"	""	"100.9"	"3.6"	"126.3"	"122.4"	""	"576"	"50"	"34.000"	"27.000"	"0.000286676760197239"	"18"	"0.0001301"	"0.004623"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDMAAAmk.[AN]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.9714"	"0.0000"	"1"	"1"	"1"	"745.37488"	"1489.74248"	"1489.74311"	"-0.42"	"-0.00031"	"7/66"	"7"	"66"	"1053049.20397949"	"HCD"	"MS2"	"0"	"79.9"	"100.000"	"52.5098"	"16349"	"16349"	"16332"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"130.7"	""	"108.7"	""	"130.1"	""	"105.1"	"1.0"	"135.3"	"145.0"	""	"583"	"35"	"34.000"	"27.000"	"0.00969702597852023"	"16"	"0.000936"	"0.01319"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDMAAAmk.[AN]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.7179"	"0.0000"	"1"	"1"	"1"	"497.25235"	"1489.74250"	"1489.74311"	"-0.41"	"-0.00020"	"7/66"	"7"	"66"	"1256570.86383057"	"HCD"	"MS2"	"17.35834"	"47.9"	"100.000"	"52.2671"	"16262"	"16262"	"16236"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.7"	""	"67.7"	""	"66.7"	""	"69.5"	""	"85.9"	"95.9"	""	"583"	"39"	"34.000"	"27.000"	"0.00397775984315672"	"26"	"0.0002479"	"0.00523"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDmAAAMk.[AN]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"745.37512"	"1489.74297"	"1489.74311"	"-0.09"	"-0.00007"	"14/66"	"14"	"66"	"1183862.76397705"	"HCD"	"MS2"	"40.65715"	"66.0"	"100.000"	"49.5741"	"15164"	"15164"	"15142"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"106.5"	""	"88.3"	""	"95.3"	""	"87.9"	""	"128.6"	"123.3"	""	"572"	"18"	"34.000"	"27.000"	"0.438900457080598"	"14"	"0.00447"	"0.04692"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDmAAAMk.[AN]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"745.37512"	"1489.74297"	"1489.74311"	"-0.09"	"-0.00007"	"8/66"	"8"	"66"	"1129153.41290283"	"HCD"	"MS2"	"42.39998"	"64.8"	"100.000"	"49.9342"	"15299"	"15299"	"15278"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"102.8"	""	"83.5"	""	"98.1"	""	"87.8"	"0.3"	"117.3"	"123.4"	""	"572"	"25"	"34.000"	"27.000"	"0.0925477858818737"	"14"	"0.004069"	"0.04409"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDmAAAMk.[AN]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"745.37518"	"1489.74309"	"1489.74311"	"-0.01"	"-0.00001"	"8/66"	"8"	"66"	"1119086.18505859"	"HCD"	"MS2"	"51.60182"	"83.3"	"100.000"	"49.5287"	"15134"	"15134"	"15105"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"135.7"	""	"111.3"	""	"122.4"	""	"120.0"	""	"139.3"	"160.9"	""	"572"	"27"	"34.000"	"27.000"	"0.0521634170863416"	"15"	"0.003059"	"0.03039"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDmAAAMk.[AN]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"745.37543"	"1489.74358"	"1489.74311"	"0.32"	"0.00023"	"8/66"	"8"	"66"	"993168.41784668"	"HCD"	"MS2"	"43.91339"	"73.2"	"100.000"	"49.0971"	"14970"	"14970"	"14944"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"115.0"	""	"106.3"	""	"110.9"	""	"102.2"	"0.4"	"131.9"	"126.5"	""	"567"	"26"	"34.000"	"27.000"	"0.0738844531424687"	"14"	"0.002973"	"0.02966"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDHLGDSPK"	"[R].yDHLGDSPk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"497.27243"	"1489.80274"	"1489.80511"	"-1.59"	"-0.00079"	"6/74"	"6"	"74"	"1397651.54058838"	"HCD"	"MS2"	"88.06546"	"57.5"	"100.000"	"41.1425"	"11725"	"11725"	"11703"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.8"	""	"68.3"	""	"71.8"	""	"93.0"	""	"125.1"	"107.6"	""	"945"	"12"	"36.000"	"29.000"	"2.70646124640804"	"13"	"0.003111"	"0.03067"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGDNIQDK"	"[R].lEGDNIQDk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"745.41595"	"1489.82463"	"1489.82624"	"-1.08"	"-0.00081"	"8/84"	"8"	"84"	"872169.612121582"	"HCD"	"MS2"	"21.64171"	"77.7"	"100.000"	"52.5225"	"16366"	"16366"	"16344"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"119.8"	""	"66.4"	""	"74.8"	""	"145.0"	""	"162.9"	"175.4"	""	"1008"	"51"	"37.000"	"30.000"	"0.000379691204121794"	"29"	"0"	"0.0009754"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGDNIQDK"	"[R].lEGDNIQDk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"745.41650"	"1489.82573"	"1489.82624"	"-0.34"	"-0.00026"	"8/84"	"8"	"84"	"790136.313110352"	"HCD"	"MS2"	"47.84106"	"70.6"	"100.000"	"52.7971"	"16467"	"16467"	"16439"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"116.8"	""	"61.9"	""	"64.8"	""	"131.0"	""	"147.7"	"148.6"	""	"1009"	"51"	"37.000"	"30.000"	"0.000398897367825911"	""	"0"	"0.0005182"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVEGADVVK"	"[K].aSGVEGADVVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"497.29211"	"1489.86179"	"1489.86263"	"-0.56"	"-0.00028"	"9/92"	"9"	"92"	"2435897.56402588"	"HCD"	"MS2"	"26.22187"	"78.9"	"100.000"	"50.7112"	"15627"	"15627"	"15604"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.6"	""	"104.9"	""	"123.0"	""	"133.2"	""	"142.8"	"153.0"	""	"911"	"39"	"36.000"	"29.000"	"0.00637512025431828"	"18"	"0"	"0.0002092"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVEGADVVK"	"[K].aSGVEGADVVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.8714"	"0.0000"	"1"	"1"	"1"	"745.43463"	"1489.86199"	"1489.86263"	"-0.43"	"-0.00032"	"17/92"	"17"	"92"	"2320290.28436279"	"HCD"	"MS2"	"7.199844"	"158.2"	"100.000"	"50.7045"	"15624"	"15624"	"15604"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"210.2"	""	"226.3"	""	"248.7"	""	"261.3"	"3.3"	"258.6"	"289.0"	""	"911"	"70"	"36.000"	"29.000"	"4.75870059855074E-06"	"26"	"0"	"1.799E-06"	"1.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVEGADVVK"	"[K].aSGVEGADVVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"497.29227"	"1489.86225"	"1489.86263"	"-0.26"	"-0.00013"	"9/92"	"9"	"92"	"2714353.89971924"	"HCD"	"MS2"	"39.99999"	"84.5"	"100.000"	"51.0157"	"15740"	"15740"	"15714"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.6"	""	"117.1"	""	"129.3"	""	"136.2"	""	"149.3"	"166.2"	""	"879"	"51"	"36.000"	"29.000"	"0.000390803891298568"	"28"	"0"	"2.914E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVEGADVVK"	"[K].aSGVEGADVVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"745.43524"	"1489.86321"	"1489.86263"	"0.39"	"0.00029"	"17/92"	"17"	"92"	"2194964.20489502"	"HCD"	"MS2"	"0"	"148.5"	"100.000"	"51.0848"	"15768"	"15768"	"15746"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"187.7"	""	"219.6"	""	"240.4"	""	"214.3"	"6.3"	"263.2"	"274.5"	""	"889"	"70"	"36.000"	"29.000"	"4.27436657741539E-06"	""	"0"	"3.311E-06"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDYMVGSYGPR"	"[K].tDYmVGSYGPR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"497.57556"	"1490.71213"	"1490.71470"	"-1.72"	"-0.00085"	"7/92"	"7"	"92"	"2020241.36981201"	"HCD"	"MS2"	"36.83323"	"44.3"	"100.000"	"50.7720"	"15641"	"15641"	"15621"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.5"	""	"58.1"	""	"65.1"	""	"78.7"	"3.8"	"73.8"	"73.4"	""	"387"	"15"	"32.000"	"25.000"	"0.634864392173885"	"13"	"0.0006732"	"0.00929"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDYMVGSYGPR"	"[K].tDYmVGSYGPR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"497.57599"	"1490.71341"	"1490.71470"	"-0.86"	"-0.00043"	"12/92"	"12"	"92"	"2078831.3737793"	"HCD"	"MS2"	"41.77547"	"41.7"	"100.000"	"50.4557"	"15523"	"15523"	"15499"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.8"	""	"47.1"	""	"61.5"	""	"79.4"	"1.0"	"72.3"	"71.5"	""	"387"	"21"	"32.000"	"25.000"	"0.158372936504082"	"14"	"0"	"0.001659"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDYMVGSYGPR"	"[K].tDYmVGSYGPR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"745.86127"	"1490.71526"	"1490.71470"	"0.38"	"0.00028"	"10/92"	"10"	"92"	"3009478.34112549"	"HCD"	"MS2"	"14.89474"	"150.9"	"100.000"	"50.5499"	"15561"	"15561"	"15543"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"157.5"	""	"175.0"	""	"194.7"	""	"339.8"	""	"264.3"	"299.9"	""	"400"	"32"	"33.000"	"26.000"	"0.0113247857807651"	"17"	"0"	"0.0006016"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDYMVGSYGPR"	"[K].tDYmVGSYGPR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"745.86182"	"1490.71636"	"1490.71470"	"1.11"	"0.00083"	"12/92"	"12"	"92"	"3145595.93652344"	"HCD"	"MS2"	"12.85647"	"146.5"	"100.000"	"50.8845"	"15686"	"15686"	"15674"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"158.6"	""	"160.3"	""	"197.2"	""	"356.4"	"4.6"	"263.1"	"247.7"	""	"396"	"43"	"32.000"	"25.000"	"0.00103196552798806"	"15"	"0"	"0.0002503"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEATDDSPK"	"[K].gLEATDDSPk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"745.90826"	"1490.80925"	"1490.81026"	"-0.68"	"-0.00050"	"9/82"	"9"	"82"	"833827.280456543"	"HCD"	"MS2"	"21.3165"	"76.7"	"100.000"	"44.0711"	"12927"	"12927"	"12897"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"137.6"	""	"96.3"	""	"90.1"	""	"112.8"	""	"153.6"	"141.1"	""	"998"	"68"	"36.000"	"29.000"	"8.0742193878389E-06"	""	"0"	"2.397E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEATDDSPK"	"[K].gLEATDDSPk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"745.90881"	"1490.81035"	"1490.81026"	"0.06"	"0.00005"	"9/82"	"9"	"82"	"1157804.69885254"	"HCD"	"MS2"	"16.21124"	"95.8"	"100.000"	"44.2474"	"12984"	"12984"	"12955"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"176.1"	""	"105.1"	""	"127.9"	""	"150.6"	""	"175.1"	"173.2"	""	"1002"	"51"	"36.000"	"30.000"	"0.00042642015713939"	"28"	"0"	"3.089E-05"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLDQQVEVFR"	"[K].qLDQQVEVFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"745.90948"	"1490.81169"	"1490.81646"	"-3.20"	"-0.00238"	"5/98"	"5"	"98"	"576106.91809082"	"HCD"	"MS2"	"12.87797"	"38.3"	"100.000"	"70.9165"	"23816"	"23816"	"23793"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.0"	""	"50.4"	""	"43.1"	""	"69.2"	"0.4"	"66.8"	"75.1"	""	"990"	"26"	"36.000"	"29.000"	"0.131705890460041"	"14"	"0"	"0.0007635"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLDQQVEVFR"	"[K].qLDQQVEVFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"745.91083"	"1490.81438"	"1490.81646"	"-1.39"	"-0.00104"	"7/98"	"7"	"98"	"684556.830627441"	"HCD"	"MS2"	"36.95753"	"44.0"	"100.000"	"71.0518"	"23858"	"23858"	"23829"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.0"	""	"46.5"	""	"58.0"	""	"89.9"	""	"75.9"	"87.3"	""	"997"	"27"	"36.000"	"29.000"	"0.110577091527041"	"18"	"0"	"0.003351"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVHIIEGDHR"	"[K].vSVHIIEGDHR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"4"	"4"	"0.9412"	"0.0000"	"1"	"1"	"1"	"373.46185"	"1490.82558"	"1490.82769"	"-1.41"	"-0.00053"	"9/94"	"9"	"94"	"3913642.03656006"	"HCD"	"MS2"	"24.49366"	"73.9"	"100.000"	"39.2250"	"10954"	"10954"	"10931"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"101.3"	""	"99.9"	""	"107.3"	""	"120.6"	""	"138.0"	"133.9"	""	"958"	"34"	"36.000"	"29.000"	"0.0213961440640311"	"17"	"0"	"0.0001994"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVHIIEGDHR"	"[K].vSVHIIEGDHR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"4"	"4"	"0.7879"	"0.0000"	"1"	"1"	"1"	"373.46191"	"1490.82583"	"1490.82769"	"-1.25"	"-0.00047"	"9/94"	"9"	"94"	"4476036.85327148"	"HCD"	"MS2"	"33.61158"	"101.2"	"100.000"	"39.4443"	"11034"	"11034"	"11011"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"144.0"	""	"132.5"	""	"145.3"	""	"166.7"	""	"174.9"	"196.4"	""	"958"	"33"	"36.000"	"29.000"	"0.0266278139232524"	"21"	"0"	"0.0004427"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQAELDETK"	"[K].vQAELDETk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"0"	"2"	"2"	"0.7818"	"0.0000"	"1"	"1"	"1"	"745.92621"	"1490.84514"	"1490.84664"	"-1.01"	"-0.00075"	"8/86"	"8"	"86"	"604279.271972656"	"HCD"	"MS2"	"0"	"53.5"	"100.000"	"55.7852"	"17695"	"17695"	"17665"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.7"	""	"58.2"	""	"54.3"	""	"107.2"	""	"99.4"	"110.4"	""	"917"	"55"	"36.000"	"29.000"	"0.000147346335696659"	"28"	"0"	"0.0001981"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDAVAEASK"	"[R].lEDAVAEASk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"497.61993"	"1490.84525"	"1490.84664"	"-0.94"	"-0.00047"	"5/86"	"5"	"86"	"925002.233154297"	"HCD"	"MS2"	"39.68574"	"34.3"	"100.000"	"69.2914"	"23154"	"23154"	"23129"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.0"	""	"43.7"	""	"47.8"	""	"55.3"	"1.0"	"67.6"	"67.5"	""	"917"	"32"	"36.000"	"29.000"	"0.0309984044217224"	"26"	"0"	"0.002076"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDAVAEASK"	"[R].lEDAVAEASk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"745.92639"	"1490.84551"	"1490.84664"	"-0.76"	"-0.00057"	"12/86"	"12"	"86"	"330579.895019531"	"HCD"	"MS2"	"100"	"27.4"	"100.000"	"69.2269"	"23128"	"23128"	"23102"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.3"	""	"31.3"	""	"38.0"	""	"38.6"	""	"61.2"	"58.3"	""	"922"	"36"	"36.000"	"29.000"	"0.0105123769519219"	"22"	"0"	"0.0004452"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDAVAEASK"	"[R].lEDAVAEASk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"0"	"2"	"2"	"0.7551"	"0.0000"	"1"	"1"	"1"	"745.92645"	"1490.84563"	"1490.84664"	"-0.68"	"-0.00051"	"8/86"	"8"	"86"	"299723.076721191"	"HCD"	"MS2"	"42.21829"	"24.6"	"100.000"	"69.3530"	"23165"	"23165"	"23139"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.8"	""	"34.5"	""	"29.5"	""	"40.2"	""	"41.6"	"52.2"	""	"922"	"49"	"36.000"	"29.000"	"0.000627625998616803"	"27"	"0"	"7.805E-05"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDQSEAEK"	"[K].iLDQSEAEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"745.92676"	"1490.84624"	"1490.84664"	"-0.27"	"-0.00020"	"14/84"	"14"	"84"	"996345.219177246"	"HCD"	"MS2"	"0"	"84.7"	"100.000"	"57.0449"	"18194"	"18194"	"18176"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"137.0"	""	"74.6"	""	"98.9"	""	"147.2"	""	"182.1"	"169.9"	""	"904"	"48"	"36.000"	"29.000"	"0.000679420168672691"	""	"0"	"0.000149"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDQSEAEK"	"[K].iLDQSEAEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.7170"	"0.0000"	"1"	"1"	"1"	"745.92712"	"1490.84697"	"1490.84664"	"0.22"	"0.00016"	"14/84"	"14"	"84"	"769473.810546875"	"HCD"	"MS2"	"0"	"65.3"	"100.000"	"56.9000"	"18149"	"18149"	"18131"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"99.9"	""	"59.7"	""	"76.5"	""	"110.1"	"0.1"	"144.1"	"129.7"	""	"918"	"53"	"36.000"	"29.000"	"0.000255160054087115"	""	"0"	"0.0002097"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDQSEAEK"	"[K].iLDQSEAEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"745.92725"	"1490.84722"	"1490.84664"	"0.38"	"0.00029"	"8/84"	"8"	"84"	"800694.250061035"	"HCD"	"MS2"	"0"	"68.7"	"100.000"	"56.6144"	"18033"	"18033"	"18006"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"122.7"	""	"66.2"	""	"84.1"	""	"120.3"	"0.0"	"134.0"	"123.3"	""	"913"	"56"	"36.000"	"29.000"	"0.000106767919944799"	""	"0"	"8.141E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDQSEAEK"	"[K].iLDQSEAEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"745.92743"	"1490.84758"	"1490.84664"	"0.63"	"0.00047"	"8/84"	"8"	"84"	"588322.436218262"	"HCD"	"MS2"	"14.38212"	"49.6"	"100.000"	"56.7593"	"18078"	"18078"	"18052"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.8"	""	"51.9"	""	"64.6"	""	"91.3"	""	"90.2"	"94.2"	""	"917"	"52"	"36.000"	"29.000"	"0.000300150685809846"	"25"	"0"	"0.0001885"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQAELDETK"	"[K].vQAELDETk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"0"	"2"	"2"	"0.7818"	"0.0000"	"1"	"1"	"1"	"745.92804"	"1490.84880"	"1490.84664"	"1.45"	"0.00108"	"8/86"	"8"	"86"	"592914.821533203"	"HCD"	"MS2"	"0"	"51.5"	"100.000"	"55.9924"	"17765"	"17765"	"17741"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.2"	""	"55.7"	""	"56.8"	""	"95.8"	"0.0"	"94.4"	"109.5"	""	"946"	"55"	"36.000"	"29.000"	"0.000155189073642505"	"28"	"0"	"0.00026"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPGFTLDDLDR"	"[R].gGPGFTLDDLDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63767"	"Breast cancer anti-estrogen resistance protein 1 OS=Rattus norvegicus OX=10116 GN=Bcar1 PE=1 SV=1"	"Q63767"	"Breast cancer anti-estrogen resistance protein 1 OS=Rattus norvegicus OX=10116 GN=Bcar1 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"746.38416"	"1491.76103"	"1491.76409"	"-2.05"	"-0.00153"	"9/98"	"9"	"98"	"207325.431640625"	"HCD"	"MS2"	"9.877009"	"14.7"	"100.000"	"85.8996"	"29821"	"29821"	"29800"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.9"	""	"11.7"	""	"21.6"	""	"28.7"	""	"28.5"	"27.6"	""	"822"	"14"	"36.000"	"29.000"	"1.73716800463163"	"18"	"0.007627"	"0.09227"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQFDADELR"	"[K].tPAQFDADELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"497.92542"	"1491.76169"	"1491.76409"	"-1.61"	"-0.00080"	"8/110"	"8"	"110"	"2784506.17590332"	"HCD"	"MS2"	"36.58642"	"33.7"	"100.000"	"65.4851"	"21603"	"21603"	"21577"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.2"	""	"34.1"	""	"38.0"	""	"75.5"	""	"64.9"	"73.7"	""	"831"	"51"	"36.000"	"29.000"	"0.00031301923673136"	"25"	"0"	"0.00257"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQFDADELR"	"[K].tPAQFDADELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"497.92551"	"1491.76197"	"1491.76409"	"-1.42"	"-0.00071"	"8/110"	"8"	"110"	"6546388.32745361"	"HCD"	"MS2"	"11.85587"	"44.8"	"100.000"	"65.7689"	"21719"	"21719"	"21702"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.8"	""	"43.4"	""	"55.8"	""	"95.6"	""	"79.6"	"91.2"	""	"831"	"39"	"36.000"	"29.000"	"0.00552803810669898"	""	"0"	"0.0008975"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQFDADELR"	"[K].tPAQFDADELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"497.92563"	"1491.76233"	"1491.76409"	"-1.18"	"-0.00059"	"7/110"	"7"	"110"	"2854883.56433105"	"HCD"	"MS2"	"24.61558"	"34.2"	"100.000"	"65.5674"	"21621"	"21621"	"21597"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.6"	""	"38.2"	""	"47.3"	""	"72.6"	""	"69.1"	"65.9"	""	"830"	"40"	"36.000"	"29.000"	"0.0045819262725936"	"27"	"0"	"0.0005238"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQFDADELR"	"[K].tPAQFDADELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.6047"	"0.0000"	"1"	"1"	"1"	"497.92578"	"1491.76279"	"1491.76409"	"-0.87"	"-0.00043"	"8/110"	"8"	"110"	"6419659.84417725"	"HCD"	"MS2"	"10.12877"	"44.9"	"100.000"	"65.8533"	"21738"	"21738"	"21721"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.0"	""	"53.7"	""	"55.6"	""	"81.0"	"0.5"	"91.9"	"85.0"	""	"842"	"43"	"36.000"	"29.000"	"0.00230293720378362"	""	"0"	"0.0009128"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQFDADELR"	"[K].tPAQFDADELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"746.38513"	"1491.76299"	"1491.76409"	"-0.74"	"-0.00055"	"10/110"	"10"	"110"	"2979689.78039551"	"HCD"	"MS2"	"1.250693"	"112.0"	"100.000"	"66.0037"	"21814"	"21814"	"21796"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"174.1"	""	"123.9"	""	"136.2"	""	"184.9"	"0.4"	"216.7"	"226.4"	""	"846"	"54"	"36.000"	"29.000"	"0.000177558050228196"	"22"	"0"	"1.927E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQFDADELR"	"[K].tPAQFDADELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"746.38550"	"1491.76372"	"1491.76409"	"-0.25"	"-0.00018"	"17/110"	"17"	"110"	"2026259.77319336"	"HCD"	"MS2"	"11.61268"	"83.5"	"100.000"	"65.4845"	"21587"	"21587"	"21565"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"122.0"	""	"97.9"	""	"95.5"	""	"158.6"	""	"164.2"	"153.9"	""	"840"	"53"	"36.000"	"29.000"	"0.000199181633809302"	"23"	"0"	"8.616E-05"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQFDADELR"	"[K].tPAQFDADELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"746.38556"	"1491.76384"	"1491.76409"	"-0.17"	"-0.00012"	"8/110"	"8"	"110"	"2035237.8046875"	"HCD"	"MS2"	"11.25849"	"82.7"	"100.000"	"65.3999"	"21568"	"21568"	"21547"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"126.7"	""	"97.7"	""	"108.5"	""	"148.9"	""	"147.0"	"155.3"	""	"840"	"53"	"36.000"	"29.000"	"0.000209531484733205"	"24"	"0"	"8.324E-05"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQFDADELR"	"[K].tPAQFDADELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"746.38562"	"1491.76396"	"1491.76409"	"-0.08"	"-0.00006"	"8/110"	"8"	"110"	"2889670.08514404"	"HCD"	"MS2"	"0.5686191"	"112.0"	"100.000"	"66.0906"	"21834"	"21834"	"21816"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"171.8"	""	"121.5"	""	"126.6"	""	"194.0"	"1.6"	"229.2"	"218.2"	""	"840"	"55"	"36.000"	"29.000"	"0.000136222639286727"	"21"	"0"	"1.236E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPGFTLDDLDR"	"[R].gGPGFTLDDLDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63767"	"Breast cancer anti-estrogen resistance protein 1 OS=Rattus norvegicus OX=10116 GN=Bcar1 PE=1 SV=1"	"Q63767"	"Breast cancer anti-estrogen resistance protein 1 OS=Rattus norvegicus OX=10116 GN=Bcar1 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"746.38568"	"1491.76409"	"1491.76409"	"0.00"	"0.00000"	"6/98"	"6"	"98"	"194111.670288086"	"HCD"	"MS2"	"0"	"14.5"	"100.000"	"85.9207"	"29830"	"29830"	"29807"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.3"	""	"19.2"	""	"18.2"	""	"24.5"	""	"27.4"	"31.7"	""	"840"	"18"	"36.000"	"29.000"	"0.625531652638584"	"21"	"0.005617"	"0.0641"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQFDADELR"	"[K].tPAQFDADELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8806"	"0.0000"	"1"	"1"	"1"	"746.38654"	"1491.76579"	"1491.76409"	"1.14"	"0.00085"	"9/110"	"9"	"110"	"31393629.2224121"	"HCD"	"MS2"	"0.2062519"	"318.2"	"30.262"	"65.6906"	"21687"	"21687"	"21670"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"484.6"	""	"337.1"	""	"381.5"	""	"563.4"	""	"624.8"	"628.9"	""	"864"	"67"	"36.000"	"29.000"	"9.27862764824389E-06"	"25"	"0"	"8.926E-05"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQFDADELR"	"[K].tPAQFDADELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"746.38751"	"1491.76775"	"1491.76409"	"2.45"	"0.00183"	"10/110"	"10"	"110"	"30102576.4423828"	"HCD"	"MS2"	"0.1633523"	"304.1"	"27.799"	"65.7819"	"21709"	"21709"	"21692"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"459.2"	""	"317.3"	""	"369.8"	""	"526.3"	""	"599.0"	"613.6"	""	"873"	"65"	"36.000"	"29.000"	"1.39631771538029E-05"	"22"	"0"	"0.0002309"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAMDGTEGLVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"746.40466"	"1491.80205"	"1491.80384"	"-1.20"	"-0.00090"	"10/102"	"10"	"102"	"1132962.28540039"	"HCD"	"MS2"	"4.840539"	"38.3"	"100.000"	"72.9760"	"24641"	"24641"	"24623"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.4"	""	"58.8"	""	"53.4"	""	"43.3"	""	"65.2"	"93.7"	""	"1043"	"58"	"37.000"	"30.000"	"7.73133181403615E-05"	"23"	"0"	"2.447E-06"	"1.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAMDGTEGLVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"746.40472"	"1491.80217"	"1491.80384"	"-1.12"	"-0.00084"	"9/102"	"9"	"102"	"1136492.06195068"	"HCD"	"MS2"	"11.57542"	"36.2"	"100.000"	"72.8363"	"24598"	"24598"	"24577"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.4"	""	"57.1"	""	"57.6"	""	"41.6"	"1.0"	"62.9"	"69.9"	""	"1036"	"56"	"37.000"	"30.000"	"0.000126278600391501"	"20"	"0"	"5.561E-07"	"1.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAMDGTEGLVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"746.40479"	"1491.80229"	"1491.80384"	"-1.04"	"-0.00078"	"9/102"	"9"	"102"	"298663.608520508"	"HCD"	"MS2"	"11.95026"	"21.2"	"100.000"	"73.5987"	"24894"	"24894"	"24875"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.5"	""	"31.8"	""	"35.2"	""	"21.0"	""	"41.2"	"43.1"	""	"1039"	"61"	"37.000"	"30.000"	"4.63004862360481E-05"	"22"	"0"	"0.0001362"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAMDGTEGLVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.8169"	"0.0000"	"1"	"1"	"1"	"497.93918"	"1491.80298"	"1491.80384"	"-0.58"	"-0.00029"	"15/102"	"15"	"102"	"1088924.35186768"	"HCD"	"MS2"	"17.05167"	"19.8"	"100.000"	"73.2345"	"24746"	"24746"	"24731"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.7"	""	"32.6"	""	"28.1"	""	"23.5"	""	"41.6"	"38.9"	""	"1035"	"71"	"37.000"	"30.000"	"3.88070253329546E-06"	"30"	"0"	"1.555E-05"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAMDGTEGLVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.7794"	"0.0000"	"1"	"1"	"1"	"497.93924"	"1491.80317"	"1491.80384"	"-0.46"	"-0.00023"	"14/102"	"14"	"102"	"1044793.61022949"	"HCD"	"MS2"	"13.6291"	"19.3"	"100.000"	"73.0991"	"24704"	"24704"	"24691"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.4"	""	"22.8"	""	"34.9"	""	"29.1"	""	"28.5"	"40.5"	""	"1036"	"68"	"37.000"	"30.000"	"8.79690211975183E-06"	""	"0"	"9.624E-05"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAMDGTEGLVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9012"	"0.0000"	"1"	"1"	"1"	"746.40546"	"1491.80364"	"1491.80384"	"-0.14"	"-0.00010"	"10/102"	"10"	"102"	"3242905.9954834"	"HCD"	"MS2"	"0.4868363"	"145.2"	"100.000"	"73.1614"	"24729"	"24729"	"24715"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"196.4"	""	"250.4"	""	"239.4"	""	"129.1"	""	"261.7"	"300.9"	""	"1029"	"81"	"37.000"	"30.000"	"4.02147505460696E-07"	"26"	"0"	"6.209E-07"	"1.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAMDGTEGLVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9012"	"0.0000"	"1"	"1"	"1"	"746.40564"	"1491.80400"	"1491.80384"	"0.11"	"0.00008"	"10/102"	"10"	"102"	"3368800.52502441"	"HCD"	"MS2"	"0"	"143.9"	"100.000"	"73.2897"	"24769"	"24769"	"24752"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"186.3"	""	"254.7"	""	"234.6"	""	"121.6"	"1.0"	"272.8"	"292.9"	""	"1022"	"81"	"37.000"	"30.000"	"3.93931672691924E-07"	"25"	"0"	"7.008E-07"	"1.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLNDGLGQSSER"	"[R].sLnDGLGQSSER.[E]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q66HF9"	"Leucine-rich repeat flightless-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Lrrfip1 PE=1 SV=1"	"Q66HF9"	"Leucine-rich repeat flightless-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Lrrfip1 PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"746.87573"	"1492.74419"	"1492.74408"	"0.07"	"0.00005"	"6/126"	"6"	"126"	"225576.307128906"	"HCD"	"MS2"	"0"	"16.3"	"100.000"	"38.4253"	"10620"	"10620"	"10590"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.7"	""	"15.1"	""	"22.4"	""	"25.8"	"1.4"	"34.6"	"37.2"	""	"684"	"14"	"35.000"	"28.000"	"1.32137506152491"	"18"	"0.005874"	"0.06562"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLNDGLGQSSER"	"[R].sLnDGLGQSSER.[E]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q66HF9"	"Leucine-rich repeat flightless-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Lrrfip1 PE=1 SV=1"	"Q66HF9"	"Leucine-rich repeat flightless-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Lrrfip1 PE=1 SV=1"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"746.87616"	"1492.74504"	"1492.74408"	"0.64"	"0.00048"	"3/126"	"3"	"126"	"271945.114685059"	"HCD"	"MS2"	"0"	"16.9"	"100.000"	"38.1946"	"10534"	"10534"	"10506"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.5"	""	"16.1"	""	"16.0"	""	"38.8"	""	"39.5"	"33.2"	""	"686"	"7"	"35.000"	"28.000"	"6.64192733633686"	"19"	"0.005617"	"0.06428"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEAENNLAAFR"	"[R].eEAENNLAAFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.88245"	"1492.75762"	"1492.75934"	"-1.15"	"-0.00086"	"6/98"	"6"	"98"	"227543.053161621"	"HCD"	"MS2"	"0"	"19.7"	"100.000"	"58.3167"	"18727"	"18727"	"18703"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.5"	""	"27.0"	""	"34.3"	""	"22.6"	""	"33.2"	"41.8"	""	"774"	"13"	"35.000"	"28.000"	"1.96205404102311"	"13"	"0.000936"	"0.0117"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEAENNLAAFR"	"[R].eEAENNLAAFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"746.88306"	"1492.75884"	"1492.75934"	"-0.34"	"-0.00025"	"8/98"	"8"	"98"	"575826.534484863"	"HCD"	"MS2"	"18.56361"	"40.3"	"100.000"	"58.1688"	"18652"	"18652"	"18623"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.1"	""	"60.4"	""	"56.9"	""	"49.3"	""	"77.3"	"81.9"	""	"813"	"49"	"36.000"	"29.000"	"0.000532182451699258"	"20"	"0"	"1.377E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEAENNLAAFR"	"[R].eEAENNLAAFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"746.88348"	"1492.75969"	"1492.75934"	"0.24"	"0.00018"	"9/98"	"9"	"98"	"350198.045898438"	"HCD"	"MS2"	"6.168466"	"26.1"	"100.000"	"58.4660"	"18773"	"18773"	"18751"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.8"	""	"33.6"	""	"40.7"	""	"32.4"	"0.8"	"47.5"	"52.2"	""	"840"	"46"	"36.000"	"29.000"	"0.000977798328219303"	"20"	"0"	"0.0001804"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEAENNLAAFR"	"[R].eEAENNLAAFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"746.88416"	"1492.76103"	"1492.75934"	"1.14"	"0.00085"	"9/98"	"9"	"98"	"656338.395141602"	"HCD"	"MS2"	"14.43089"	"44.1"	"100.000"	"57.9802"	"18590"	"18590"	"18559"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"73.7"	""	"71.5"	""	"61.2"	""	"46.1"	""	"84.2"	"84.2"	""	"838"	"56"	"36.000"	"29.000"	"9.77718928095741E-05"	"26"	"0"	"1.038E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAAGTSEATSSVR"	"[K].aGAAGTSEATSSVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"0.7935"	"0.0000"	"1"	"1"	"1"	"747.39081"	"1493.77434"	"1493.77572"	"-0.92"	"-0.00069"	"12/116"	"12"	"116"	"998009.162841797"	"HCD"	"MS2"	"48.02345"	"63.8"	"100.000"	"26.3790"	"5732"	"5732"	"5710"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"64.2"	""	"84.9"	""	"64.8"	""	"118.4"	"0.9"	"142.4"	"131.4"	""	"863"	"92"	"36.000"	"29.000"	"2.62410253051767E-08"	""	"0"	"1.877E-08"	"1.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAAGTSEATSSVR"	"[K].aGAAGTSEATSSVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"747.39099"	"1493.77471"	"1493.77572"	"-0.68"	"-0.00050"	"13/116"	"13"	"116"	"977157.66796875"	"HCD"	"MS2"	"45.84298"	"67.3"	"100.000"	"26.2871"	"5711"	"5711"	"5690"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.8"	""	"91.3"	""	"76.9"	""	"109.6"	""	"139.7"	"142.9"	""	"865"	"92"	"36.000"	"29.000"	"2.53504756152318E-08"	""	"0"	"4.056E-10"	"1.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADGDVDAVLSR"	"[R].fADGDVDAVLSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"747.39386"	"1493.78044"	"1493.77974"	"0.47"	"0.00035"	"6/104"	"6"	"104"	"226847.935974121"	"HCD"	"MS2"	"47.10431"	"15.7"	"100.000"	"86.7844"	"30172"	"30172"	"30158"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.3"	""	"16.8"	""	"25.3"	""	"28.6"	""	"24.8"	"31.0"	""	"877"	"21"	"36.000"	"29.000"	"0.325813891967704"	"17"	"0.001978"	"0.02208"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADGDVDAVLSR"	"[R].fADGDVDAVLSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"747.39484"	"1493.78240"	"1493.77974"	"1.78"	"0.00133"	"6/104"	"6"	"104"	"214349.990783691"	"HCD"	"MS2"	"49.66682"	"16.2"	"100.000"	"86.8399"	"30191"	"30191"	"30169"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.0"	""	"16.2"	""	"24.3"	""	"27.3"	""	"30.0"	"36.7"	""	"866"	"28"	"36.000"	"29.000"	"0.0726922139847069"	"19"	"0.002056"	"0.0223"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLEMESAWR"	"[R].eVLEmESAWR.[Y]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"747.87579"	"1494.74431"	"1494.74600"	"-1.13"	"-0.00084"	"8/84"	"8"	"84"	"646566.02746582"	"HCD"	"MS2"	"34.33155"	"28.1"	"100.000"	"68.0321"	"22626"	"22626"	"22599"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.2"	""	"34.6"	""	"44.2"	""	"49.3"	""	"46.9"	"53.9"	""	"656"	"27"	"35.000"	"28.000"	"0.0600999130537758"	"22"	"0.003449"	"0.03531"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFSQQADLSR"	"[R].dVFSQQADLSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"0"	"2"	"2"	"0.8036"	"0.0000"	"1"	"1"	"1"	"747.89081"	"1494.77434"	"1494.77499"	"-0.43"	"-0.00032"	"9/110"	"9"	"110"	"386486.597595215"	"HCD"	"MS2"	"0"	"23.5"	"100.000"	"61.5105"	"19996"	"19996"	"19969"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.5"	""	"17.4"	""	"28.6"	""	"64.5"	""	"41.1"	"39.5"	""	"855"	"56"	"36.000"	"29.000"	"9.83866376942137E-05"	"27"	"0"	"6.229E-05"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFSQQADLSR"	"[R].dVFSQQADLSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"747.89160"	"1494.77593"	"1494.77499"	"0.63"	"0.00047"	"12/110"	"12"	"110"	"312513.310913086"	"HCD"	"MS2"	"8.865543"	"21.5"	"100.000"	"61.4249"	"19945"	"19945"	"19921"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.4"	""	"23.6"	""	"22.7"	""	"47.3"	""	"46.8"	"35.0"	""	"860"	"13"	"36.000"	"29.000"	"2.18508560301041"	"16"	"0.0007829"	"0.009423"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFSQQADLSR"	"[R].dVFSQQADLSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"747.89233"	"1494.77739"	"1494.77499"	"1.61"	"0.00120"	"6/110"	"6"	"110"	"235259.834228516"	"HCD"	"MS2"	"0"	"15.0"	"100.000"	"61.2043"	"19871"	"19871"	"19842"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.7"	""	"16.4"	""	"14.6"	""	"34.2"	""	"27.6"	"25.3"	""	"875"	"39"	"36.000"	"29.000"	"0.00582073807865415"	"23"	"0"	"0.002394"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQVEPADYK"	"[R].sQVEPADYk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53812"	"Phosphatidylinositol transfer protein beta isoform OS=Rattus norvegicus OX=10116 GN=Pitpnb PE=1 SV=2"	"P53812"	"Phosphatidylinositol transfer protein beta isoform OS=Rattus norvegicus OX=10116 GN=Pitpnb PE=1 SV=2"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"747.91394"	"1494.82060"	"1494.82043"	"0.12"	"0.00009"	"13/90"	"13"	"90"	"596321.510253906"	"HCD"	"MS2"	"0"	"53.0"	"100.000"	"46.2878"	"13826"	"13826"	"13801"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.7"	""	"52.6"	""	"69.1"	""	"84.3"	"1.7"	"111.8"	"112.1"	""	"987"	"34"	"36.000"	"29.000"	"0.0219425530496005"	""	"0"	"0.001214"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQVEPADYK"	"[R].sQVEPADYk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53812"	"Phosphatidylinositol transfer protein beta isoform OS=Rattus norvegicus OX=10116 GN=Pitpnb PE=1 SV=2"	"P53812"	"Phosphatidylinositol transfer protein beta isoform OS=Rattus norvegicus OX=10116 GN=Pitpnb PE=1 SV=2"	"0"	"2"	"2"	"0.3103"	"0.0000"	"1"	"1"	"1"	"747.91400"	"1494.82073"	"1494.82043"	"0.20"	"0.00015"	"13/90"	"13"	"90"	"548738.577819824"	"HCD"	"MS2"	"0"	"48.5"	"100.000"	"46.4418"	"13877"	"13877"	"13852"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.6"	""	"57.1"	""	"62.2"	""	"68.5"	""	"105.7"	"110.6"	""	"987"	"29"	"36.000"	"29.000"	"0.0615583764278893"	""	"0.0002479"	"0.005894"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEEGEAFAR"	"[K].kEEGEAFAR.[E]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"498.94855"	"1494.83109"	"1494.83166"	"-0.38"	"-0.00019"	"8/86"	"8"	"86"	"6393394.65484619"	"HCD"	"MS2"	"10.67041"	"310.4"	"100.000"	"33.4869"	"8623"	"8623"	"8606"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"465.1"	""	"348.1"	""	"383.8"	""	"544.5"	"0.2"	"591.4"	"609.6"	""	"968"	"13"	"36.000"	"29.000"	"2.43694294653346"	"13"	"0.00447"	"0.04856"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEEGEAFAR"	"[K].kEEGEAFAR.[E]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"498.94861"	"1494.83127"	"1494.83166"	"-0.26"	"-0.00013"	"13/86"	"13"	"86"	"6816235.3034668"	"HCD"	"MS2"	"9.953807"	"335.4"	"100.000"	"33.4157"	"8601"	"8601"	"8583"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"504.1"	""	"416.0"	""	"426.4"	""	"557.5"	""	"624.3"	"653.2"	""	"970"	"12"	"36.000"	"29.000"	"3.24894035567015"	"13"	"0.003922"	"0.03948"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAFGGETDEATR"	"[K].iAFGGETDEATR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"748.38220"	"1495.75713"	"1495.75900"	"-1.25"	"-0.00094"	"9/98"	"9"	"98"	"985113.675415039"	"HCD"	"MS2"	"6.944684"	"55.3"	"100.000"	"57.6621"	"18445"	"18445"	"18426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.2"	""	"75.4"	""	"78.2"	""	"87.9"	""	"102.0"	"96.9"	""	"772"	"75"	"35.000"	"28.000"	"1.29893465778939E-06"	"26"	"0"	"1.776E-06"	"1.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAFGGETDEATR"	"[K].iAFGGETDEATR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"748.38257"	"1495.75786"	"1495.75900"	"-0.76"	"-0.00057"	"9/98"	"9"	"98"	"817751.935791016"	"HCD"	"MS2"	"0"	"43.1"	"100.000"	"57.7176"	"18482"	"18482"	"18468"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.6"	""	"51.7"	""	"55.2"	""	"72.0"	"2.4"	"82.6"	"83.7"	""	"775"	"72"	"35.000"	"28.000"	"2.27128538749186E-06"	"23"	"0"	"1.329E-06"	"1.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAFGGETDEATR"	"[K].iAFGGETDEATR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8302"	"0.0000"	"1"	"1"	"1"	"748.38287"	"1495.75847"	"1495.75900"	"-0.36"	"-0.00027"	"13/98"	"13"	"98"	"526618.996948242"	"HCD"	"MS2"	"0"	"31.7"	"100.000"	"57.9547"	"18564"	"18564"	"18543"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.4"	""	"39.7"	""	"44.7"	""	"56.2"	""	"57.2"	"66.3"	""	"767"	"53"	"35.000"	"28.000"	"0.00017896387235053"	"25"	"0"	"0.0002404"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAFGGETDEATR"	"[K].iAFGGETDEATR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"748.38318"	"1495.75908"	"1495.75900"	"0.05"	"0.00004"	"10/98"	"10"	"98"	"805748.004516602"	"HCD"	"MS2"	"7.092515"	"45.7"	"100.000"	"57.4390"	"18369"	"18369"	"18345"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.4"	""	"58.6"	""	"55.7"	""	"76.1"	""	"89.1"	"88.5"	""	"785"	"87"	"35.000"	"28.000"	"7.06056834188049E-08"	"27"	"0"	"4.815E-07"	"1.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQGDFDPGSK"	"[R].sQGDFDPGSk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"748.39288"	"1495.77849"	"1495.77929"	"-0.54"	"-0.00040"	"9/104"	"9"	"104"	"2775777.15539551"	"HCD"	"MS2"	"0"	"214.1"	"100.000"	"45.2503"	"13391"	"13391"	"13371"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"235.4"	""	"241.5"	""	"215.8"	""	"374.6"	"0.9"	"477.6"	"491.3"	""	"907"	"48"	"36.000"	"29.000"	"0.000749164675496858"	"25"	"0"	"0.0001894"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQGDFDPGSK"	"[R].sQGDFDPGSk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"748.39319"	"1495.77910"	"1495.77929"	"-0.13"	"-0.00010"	"15/104"	"15"	"104"	"2683822.64770508"	"HCD"	"MS2"	"0"	"211.8"	"100.000"	"45.0959"	"13339"	"13339"	"13319"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"215.6"	""	"248.2"	""	"208.7"	""	"364.8"	""	"487.4"	"496.0"	""	"899"	"53"	"36.000"	"29.000"	"0.00024588367532084"	"26"	"0"	"0.0001416"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NILSSADYVER"	"[K].nILSSADYVER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08850"	"Syntaxin-4 OS=Rattus norvegicus OX=10116 GN=Stx4 PE=1 SV=1"	"Q08850"	"Syntaxin-4 OS=Rattus norvegicus OX=10116 GN=Stx4 PE=1 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"748.40082"	"1495.79436"	"1495.79539"	"-0.69"	"-0.00051"	"8/112"	"8"	"112"	"357414.905639648"	"HCD"	"MS2"	"25.11664"	"23.2"	"100.000"	"71.8772"	"24207"	"24207"	"24184"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.0"	""	"27.9"	""	"29.2"	""	"35.4"	""	"49.4"	"53.2"	""	"939"	"34"	"36.000"	"29.000"	"0.0186052537082929"	"18"	"0"	"0.0005808"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NILSSADYVER"	"[K].nILSSADYVER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08850"	"Syntaxin-4 OS=Rattus norvegicus OX=10116 GN=Stx4 PE=1 SV=1"	"Q08850"	"Syntaxin-4 OS=Rattus norvegicus OX=10116 GN=Stx4 PE=1 SV=1"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"748.40112"	"1495.79497"	"1495.79539"	"-0.28"	"-0.00021"	"6/112"	"6"	"112"	"311539.09161377"	"HCD"	"MS2"	"27.21667"	"21.5"	"100.000"	"72.0310"	"24256"	"24256"	"24234"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.9"	""	"23.8"	""	"23.3"	""	"32.9"	"0.4"	"46.9"	"48.6"	""	"934"	"28"	"36.000"	"29.000"	"0.0673467869162114"	"18"	"0.0004639"	"0.007511"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].FPNAEFAEITk.[L]"	"K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"748.40125"	"1495.79521"	"1495.79941"	"-2.81"	"-0.00210"	"6/106"	"6"	"106"	"140714.549255371"	"HCD"	"MS2"	"26.07032"	"7.8"	"100.000"	"83.8044"	"28997"	"28997"	"28979"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.7"	""	"9.8"	""	"10.8"	""	"9.4"	""	"18.6"	"13.6"	""	"924"	"35"	"36.000"	"29.000"	"0.0140488888186244"	"15"	"0.002056"	"0.0226"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].FPNAEFAEITk.[L]"	"K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"748.40240"	"1495.79753"	"1495.79941"	"-1.26"	"-0.00094"	"8/106"	"8"	"106"	"484950.34765625"	"HCD"	"MS2"	"4.101319"	"20.0"	"100.000"	"84.1141"	"29121"	"29121"	"29102"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.9"	""	"33.3"	""	"25.3"	""	"31.1"	"1.4"	"32.6"	"34.6"	""	"946"	"63"	"36.000"	"29.000"	"2.29013529867279E-05"	"22"	"0"	"0.0005598"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].FPNAEFAEITk.[L]"	"K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"748.40265"	"1495.79802"	"1495.79941"	"-0.93"	"-0.00069"	"6/106"	"6"	"106"	"124119.833129883"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"84.6095"	"29317"	"29317"	"29308"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.0"	""	"11.1"	""	"12.7"	""	"12.8"	""	"13.6"	"10.5"	""	"949"	"26"	"36.000"	"29.000"	"0.117283310681015"	"25"	"0.002973"	"0.03029"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].FPNAEFAEITk.[L]"	"K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8955"	"0.0000"	"1"	"1"	"1"	"748.40277"	"1495.79827"	"1495.79941"	"-0.77"	"-0.00057"	"8/106"	"8"	"106"	"356441.219543457"	"HCD"	"MS2"	"0"	"17.7"	"100.000"	"84.3270"	"29206"	"29206"	"29196"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.2"	""	"27.6"	""	"25.6"	""	"26.3"	""	"32.8"	"28.7"	""	"949"	"67"	"36.000"	"29.000"	"1.05496054311409E-05"	"24"	"0"	"0.0001566"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].FPNAEFAEITk.[L]"	"K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9403"	"0.0000"	"1"	"1"	"1"	"748.40302"	"1495.79875"	"1495.79941"	"-0.44"	"-0.00033"	"8/106"	"8"	"106"	"426703.528442383"	"HCD"	"MS2"	"0"	"17.5"	"100.000"	"84.0543"	"29098"	"29098"	"29078"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.3"	""	"34.8"	""	"23.6"	""	"31.1"	""	"30.4"	"24.3"	""	"945"	"67"	"36.000"	"29.000"	"1.01953423332464E-05"	"21"	"0"	"0.0004359"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].FPNAEFAEITk.[L]"	"K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"748.40314"	"1495.79900"	"1495.79941"	"-0.28"	"-0.00021"	"8/106"	"8"	"106"	"296690.558166504"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"84.4126"	"29242"	"29242"	"29227"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.0"	""	"22.6"	""	"19.7"	""	"17.8"	""	"24.0"	"22.5"	""	"942"	"67"	"36.000"	"29.000"	"8.77043041368211E-06"	"17"	"0"	"0.0001639"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETPAGGNLSPAPR"	"[K].eTPAGGNLSPAPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG48"	"Protein PRRC2A OS=Rattus norvegicus OX=10116 GN=Prrc2a PE=1 SV=1"	"Q6MG48"	"Protein PRRC2A OS=Rattus norvegicus OX=10116 GN=Prrc2a PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"748.40485"	"1495.80242"	"1495.80662"	"-2.81"	"-0.00210"	"11/124"	"11"	"124"	"269471.641357422"	"HCD"	"MS2"	"0"	"16.1"	"100.000"	"38.6530"	"10712"	"10712"	"10687"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.4"	""	"21.1"	""	"21.2"	""	"28.0"	""	"34.4"	"27.8"	""	"950"	"19"	"36.000"	"29.000"	"0.547890297465019"	"21"	"0.003111"	"0.03128"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETPAGGNLSPAPR"	"[K].eTPAGGNLSPAPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG48"	"Protein PRRC2A OS=Rattus norvegicus OX=10116 GN=Prrc2a PE=1 SV=1"	"Q6MG48"	"Protein PRRC2A OS=Rattus norvegicus OX=10116 GN=Prrc2a PE=1 SV=1"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"748.40533"	"1495.80339"	"1495.80662"	"-2.16"	"-0.00161"	"8/124"	"8"	"124"	"364760.324707031"	"HCD"	"MS2"	"23.98884"	"22.1"	"100.000"	"38.4245"	"10628"	"10628"	"10599"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.5"	""	"23.3"	""	"31.7"	""	"38.1"	""	"40.6"	"44.5"	""	"947"	"33"	"36.000"	"29.000"	"0.0256047171914732"	"17"	"0"	"0.002381"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDQPAASPGPTLR"	"[K].gDQPAASPGPTLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"748.40643"	"1495.80559"	"1495.80662"	"-0.69"	"-0.00052"	"9/134"	"9"	"134"	"777168.696228027"	"HCD"	"MS2"	"22.06383"	"53.6"	"100.000"	"37.5977"	"10292"	"10292"	"10276"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.5"	""	"68.7"	""	"73.4"	""	"96.4"	""	"107.2"	"111.7"	""	"931"	"30"	"36.000"	"29.000"	"0.0487438339117694"	"15"	"0"	"0.0002039"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAPAQPAPEK"	"[K].eAPAQPAPEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6AXT8"	"Splicing factor 3A subunit 2 OS=Rattus norvegicus OX=10116 GN=Sf3a2 PE=2 SV=1"	"Q6AXT8"	"Splicing factor 3A subunit 2 OS=Rattus norvegicus OX=10116 GN=Sf3a2 PE=2 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"748.42908"	"1495.85088"	"1495.85206"	"-0.79"	"-0.00059"	"7/98"	"7"	"98"	"744946.643310547"	"HCD"	"MS2"	"0"	"45.0"	"100.000"	"36.1028"	"9688"	"9688"	"9667"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.7"	""	"36.8"	""	"36.1"	""	"86.0"	"1.2"	"98.7"	"105.5"	""	"763"	"39"	"35.000"	"28.000"	"0.00493735713513169"	"21"	"0"	"0.001214"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAPAQPAPEK"	"[K].eAPAQPAPEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6AXT8"	"Splicing factor 3A subunit 2 OS=Rattus norvegicus OX=10116 GN=Sf3a2 PE=2 SV=1"	"Q6AXT8"	"Splicing factor 3A subunit 2 OS=Rattus norvegicus OX=10116 GN=Sf3a2 PE=2 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"748.43018"	"1495.85307"	"1495.85206"	"0.68"	"0.00051"	"7/98"	"7"	"98"	"427423.9375"	"HCD"	"MS2"	"32.76765"	"27.4"	"100.000"	"36.2304"	"9734"	"9734"	"9709"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.0"	""	"25.6"	""	"28.5"	""	"55.7"	""	"57.3"	"53.8"	""	"743"	"41"	"35.000"	"28.000"	"0.0026974836318716"	"22"	"0"	"0.00101"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGmSIVEAMER.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"748.86609"	"1496.72490"	"1496.72863"	"-2.49"	"-0.00186"	"9/98"	"9"	"98"	"550003.078979492"	"HCD"	"MS2"	"11.41079"	"27.6"	"100.000"	"66.6287"	"22069"	"22069"	"22045"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.7"	""	"18.8"	""	"24.5"	""	"83.4"	""	"60.3"	"53.8"	""	"537"	"42"	"34.000"	"27.000"	"0.00169802582094515"	""	"0.003111"	"0.03046"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAmER.[F]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"748.86646"	"1496.72563"	"1496.72863"	"-2.00"	"-0.00150"	"8/98"	"8"	"98"	"591120.022583008"	"HCD"	"MS2"	"49.96865"	"28.4"	"100.000"	"55.7875"	"17696"	"17696"	"17665"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.2"	""	"27.1"	""	"31.1"	""	"40.6"	"1.3"	"58.6"	"69.1"	""	"541"	"31"	"34.000"	"27.000"	"0.0218860440727752"	"27"	"0"	"0.0006329"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGmSIVEAMER.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.1000"	"0.0000"	"1"	"1"	"1"	"748.86694"	"1496.72661"	"1496.72863"	"-1.35"	"-0.00101"	"7/98"	"7"	"98"	"216779.399719238"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"75.0939"	"25496"	"25496"	"25473"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.5"	""	"13.9"	""	"19.4"	""	"19.0"	""	"28.8"	"17.9"	""	"537"	"20"	"34.000"	"27.000"	"0.283102881681053"	""	"0.00736"	"0.08513"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVMIDEDMTAR"	"[R].sVMIDEDMTAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"748.86694"	"1496.72661"	"1496.72863"	"-1.35"	"-0.00101"	"7/96"	"7"	"96"	"308233.995361328"	"HCD"	"MS2"	"14.98785"	"20.4"	"100.000"	"64.8166"	"21317"	"21317"	"21287"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.1"	""	"28.0"	""	"28.9"	""	"24.1"	""	"37.5"	"42.1"	""	"537"	"44"	"34.000"	"27.000"	"0.00115330530586372"	"20"	"0"	"0.0003675"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGmSIVEAMER.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"748.86694"	"1496.72661"	"1496.72863"	"-1.35"	"-0.00101"	"12/98"	"12"	"98"	"533916.418579102"	"HCD"	"MS2"	"12.96811"	"27.2"	"100.000"	"66.7290"	"22095"	"22095"	"22068"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.4"	""	"16.8"	""	"27.2"	""	"86.7"	""	"49.4"	"58.1"	""	"537"	"26"	"34.000"	"27.000"	"0.067911651204579"	""	"0.001546"	"0.01859"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGmSIVEAMER.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"499.58041"	"1496.72669"	"1496.72863"	"-1.30"	"-0.00065"	"9/98"	"9"	"98"	"510846.678100586"	"HCD"	"MS2"	"57.68253"	"20.9"	"100.000"	"67.2248"	"22297"	"22297"	"22274"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.2"	"3.2"	"24.2"	""	"23.5"	""	"42.6"	""	"42.2"	"42.9"	""	"540"	"17"	"34.000"	"27.000"	"0.562812538436268"	"14"	"0"	"0.00316"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGmSIVEAMER.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"748.86719"	"1496.72710"	"1496.72863"	"-1.02"	"-0.00077"	"13/98"	"13"	"98"	"254237.673828125"	"HCD"	"MS2"	"22.93081"	"18.3"	"100.000"	"76.9585"	"26252"	"26252"	"26235"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.9"	""	"23.5"	""	"29.4"	""	"29.6"	""	"36.6"	"27.9"	""	"535"	"21"	"34.000"	"27.000"	"0.23351984104382"	""	"0.007872"	"0.09673"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGmSIVEAMER.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"748.86719"	"1496.72710"	"1496.72863"	"-1.02"	"-0.00077"	"10/98"	"10"	"98"	"597514.331237793"	"HCD"	"MS2"	"0"	"31.9"	"100.000"	"66.3673"	"21947"	"21947"	"21927"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.7"	""	"25.9"	""	"31.4"	""	"78.3"	"1.5"	"66.0"	"63.7"	""	"535"	"44"	"34.000"	"27.000"	"0.00104549939624468"	""	"0.0001301"	"0.004456"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGmSIVEAMER.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"748.86725"	"1496.72722"	"1496.72863"	"-0.94"	"-0.00071"	"10/98"	"10"	"98"	"171306.762939453"	"HCD"	"MS2"	"10.06018"	"9.8"	"100.000"	"80.5936"	"27722"	"27722"	"27706"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.5"	""	"10.2"	""	"11.0"	""	"16.1"	""	"20.6"	"19.7"	""	"535"	"14"	"34.000"	"27.000"	"0.964547870082894"	"24"	"0.008437"	"0.1014"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAmER.[F]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"748.86725"	"1496.72722"	"1496.72863"	"-0.94"	"-0.00071"	"8/98"	"8"	"98"	"620960.50579834"	"HCD"	"MS2"	"27.54844"	"29.3"	"100.000"	"55.1564"	"17438"	"17438"	"17416"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.7"	""	"30.5"	""	"30.2"	""	"42.0"	"0.1"	"70.0"	"63.7"	""	"535"	"25"	"34.000"	"27.000"	"0.0925387835684877"	"27"	"0"	"0.003067"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAmER.[F]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.2778"	"0.0000"	"1"	"1"	"1"	"499.58066"	"1496.72742"	"1496.72863"	"-0.81"	"-0.00040"	"8/98"	"8"	"98"	"268586.203918457"	"HCD"	"MS2"	"22.05502"	"8.5"	"100.000"	"75.8132"	"25788"	"25788"	"25762"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.1"	"2.4"	"7.8"	""	"12.4"	""	"10.2"	""	"18.2"	"18.1"	""	"537"	"18"	"34.000"	"27.000"	"0.462321712383743"	"17"	"0.001886"	"0.02166"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGmSIVEAMER.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"748.86737"	"1496.72746"	"1496.72863"	"-0.78"	"-0.00058"	"9/98"	"9"	"98"	"523806.140075684"	"HCD"	"MS2"	"0"	"32.4"	"100.000"	"65.9876"	"21808"	"21808"	"21780"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.8"	""	"29.0"	""	"34.6"	""	"76.3"	"1.1"	"59.8"	"70.3"	""	"533"	"36"	"34.000"	"27.000"	"0.0060213963276389"	""	"0.001211"	"0.01538"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGmSIVEAMER.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.5476"	"0.0000"	"1"	"1"	"1"	"748.86737"	"1496.72746"	"1496.72863"	"-0.78"	"-0.00058"	"9/98"	"9"	"98"	"1143252.52636719"	"HCD"	"MS2"	"0"	"48.9"	"100.000"	"66.9307"	"22192"	"22192"	"22172"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.4"	""	"32.4"	""	"35.1"	""	"159.3"	"3.5"	"99.4"	"95.4"	""	"533"	"42"	"34.000"	"27.000"	"0.00167377552623749"	""	"0"	"8.672E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGmSIVEAMER.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.5918"	"0.0000"	"1"	"1"	"1"	"748.86743"	"1496.72759"	"1496.72863"	"-0.70"	"-0.00052"	"9/98"	"9"	"98"	"1049720.97869873"	"HCD"	"MS2"	"0"	"43.4"	"100.000"	"67.0193"	"22213"	"22213"	"22195"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.7"	""	"27.9"	""	"30.5"	""	"139.8"	""	"90.9"	"91.7"	""	"531"	"49"	"34.000"	"27.000"	"0.000348389073189598"	""	"0"	"7.792E-05"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EGMSIVEAMER"	"[K].eGmSIVEAMER.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"748.86749"	"1496.72771"	"1496.72863"	"-0.62"	"-0.00046"	"11/98"	"11"	"98"	"187823.640136719"	"HCD"	"MS2"	"15.76389"	"11.1"	"100.000"	"73.9917"	"25067"	"25067"	"25044"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.9"	""	"11.5"	""	"14.2"	""	"19.8"	""	"22.9"	"22.4"	""	"533"	"14"	"34.000"	"27.000"	"1.12123646464454"	"23"	"0.00599"	"0.06925"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGmSIVEAMER.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"748.86749"	"1496.72771"	"1496.72863"	"-0.62"	"-0.00046"	"7/98"	"7"	"98"	"244995.95880127"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"76.5372"	"26091"	"26091"	"26066"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.8"	""	"11.8"	""	"12.1"	""	"17.8"	""	"28.2"	"24.8"	""	"533"	"20"	"34.000"	"27.000"	"0.267730108109192"	"27"	"0.006685"	"0.07526"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGmSIVEAMER.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"748.86749"	"1496.72771"	"1496.72863"	"-0.62"	"-0.00046"	"8/98"	"8"	"98"	"574208.749511719"	"HCD"	"MS2"	"0"	"32.3"	"100.000"	"66.3129"	"21940"	"21940"	"21917"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.9"	""	"26.7"	""	"31.0"	""	"86.7"	""	"61.9"	"63.8"	""	"533"	"38"	"34.000"	"27.000"	"0.00386097698969679"	""	"0.001211"	"0.01414"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EGMSIVEAMER"	"[K].eGmSIVEAMER.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.0370"	"0.0000"	"1"	"1"	"1"	"748.86761"	"1496.72795"	"1496.72863"	"-0.45"	"-0.00034"	"12/98"	"12"	"98"	"216525.126586914"	"HCD"	"MS2"	"14.40563"	"14.5"	"100.000"	"76.2911"	"25982"	"25982"	"25961"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.3"	""	"12.7"	""	"18.6"	""	"22.1"	""	"29.9"	"33.8"	""	"533"	"27"	"34.000"	"27.000"	"0.0573716332304045"	"16"	"0.006739"	"0.07574"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGmSIVEAMER.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.1304"	"0.0000"	"1"	"1"	"1"	"748.86761"	"1496.72795"	"1496.72863"	"-0.45"	"-0.00034"	"12/98"	"12"	"98"	"252575.82989502"	"HCD"	"MS2"	"0"	"13.9"	"100.000"	"75.2666"	"25577"	"25577"	"25550"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.4"	""	"12.0"	""	"21.3"	""	"20.9"	""	"28.6"	"31.1"	""	"533"	"23"	"34.000"	"27.000"	"0.139539516350102"	""	"0.005427"	"0.06163"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAmER.[F]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"748.86768"	"1496.72807"	"1496.72863"	"-0.37"	"-0.00028"	"9/98"	"9"	"98"	"586916.493408203"	"HCD"	"MS2"	"22.08223"	"27.6"	"100.000"	"55.3887"	"17519"	"17519"	"17495"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.2"	""	"25.9"	""	"33.9"	""	"48.1"	""	"55.9"	"58.8"	""	"533"	"30"	"34.000"	"27.000"	"0.0286877979432351"	"26"	"0"	"0.001138"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVMIDEDMTAR"	"[R].sVMIDEDMTAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.9123"	"0.0000"	"1"	"1"	"1"	"748.86774"	"1496.72820"	"1496.72863"	"-0.29"	"-0.00022"	"15/96"	"15"	"96"	"1346408.41101074"	"HCD"	"MS2"	"4.796733"	"74.9"	"100.000"	"64.9991"	"21406"	"21406"	"21390"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"108.6"	""	"112.5"	""	"110.6"	""	"82.1"	""	"139.9"	"156.4"	""	"532"	"57"	"34.000"	"27.000"	"5.63484061976101E-05"	"21"	"0"	"2.044E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAmER.[F]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.7544"	"0.0000"	"1"	"1"	"1"	"748.86780"	"1496.72832"	"1496.72863"	"-0.21"	"-0.00016"	"9/98"	"9"	"98"	"610480.272521973"	"HCD"	"MS2"	"35.08284"	"31.2"	"100.000"	"56.0015"	"17769"	"17769"	"17741"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.0"	""	"35.5"	""	"43.9"	""	"44.0"	"0.1"	"66.4"	"69.9"	""	"535"	"57"	"34.000"	"27.000"	"5.93367542296559E-05"	""	"0"	"0.000213"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVMIDEDMTAR"	"[R].sVMIDEDMTAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"748.86798"	"1496.72869"	"1496.72863"	"0.04"	"0.00003"	"7/96"	"7"	"96"	"220891.918212891"	"HCD"	"MS2"	"19.25469"	"16.1"	"100.000"	"64.7019"	"21289"	"21289"	"21263"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.4"	""	"25.3"	""	"24.8"	""	"18.5"	""	"29.1"	"26.9"	""	"537"	"47"	"34.000"	"27.000"	"0.000532040006428669"	"22"	"0"	"0.0008341"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGmSIVEAMER.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.5349"	"0.0000"	"1"	"1"	"1"	"748.86816"	"1496.72905"	"1496.72863"	"0.28"	"0.00021"	"10/98"	"10"	"98"	"551900.083312988"	"HCD"	"MS2"	"0"	"32.4"	"100.000"	"66.0745"	"21828"	"21828"	"21801"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.9"	""	"34.5"	""	"35.5"	""	"69.7"	""	"61.7"	"66.1"	""	"536"	"43"	"34.000"	"27.000"	"0.00129459758946659"	""	"0.001211"	"0.01489"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVMIDEDMTAR"	"[R].sVMIDEDMTAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.9298"	"0.0000"	"1"	"1"	"1"	"748.86816"	"1496.72905"	"1496.72863"	"0.28"	"0.00021"	"8/96"	"8"	"96"	"1366522.99957275"	"HCD"	"MS2"	"5.837235"	"76.2"	"100.000"	"65.0868"	"21426"	"21426"	"21415"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"111.3"	""	"118.4"	""	"111.2"	""	"78.8"	"0.3"	"141.8"	"160.2"	""	"536"	"57"	"34.000"	"27.000"	"5.2618055419206E-05"	"20"	"0"	"1.818E-06"	"1.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAmER.[F]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.2222"	"0.0000"	"1"	"1"	"1"	"499.58127"	"1496.72925"	"1496.72863"	"0.41"	"0.00021"	"8/98"	"8"	"98"	"317239.382141113"	"HCD"	"MS2"	"31.32091"	"10.1"	"100.000"	"74.6203"	"25309"	"25309"	"25285"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.7"	""	"13.6"	""	"12.4"	""	"17.1"	"1.5"	"19.5"	"21.8"	""	"545"	"9"	"34.000"	"27.000"	"3.57574472482732"	"20"	"0.004942"	"0.05398"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVVEASEAAYK"	"[K].NSVVEASEAAYk.[E]"	"K12(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"748.89539"	"1496.78349"	"1496.77940"	"2.73"	"0.00205"	"6/122"	"6"	"122"	"278363.410644531"	"HCD"	"MS2"	"0"	"28.6"	"100.000"	"48.2478"	"14624"	"14624"	"14594"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.2"	""	"34.8"	""	"31.2"	""	"45.8"	""	"61.5"	"53.6"	""	"780"	"5"	"35.000"	"28.000"	"13.0336065610185"	"15"	"0.008437"	"0.1012"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVVEASEAAYK"	"[K].NSVVEASEAAYk.[E]"	"K12(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"748.89551"	"1496.78374"	"1496.77940"	"2.90"	"0.00217"	"6/122"	"6"	"122"	"277854.406494141"	"HCD"	"MS2"	"0"	"26.0"	"100.000"	"48.1326"	"14577"	"14577"	"14546"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.4"	""	"29.0"	""	"32.7"	""	"38.7"	"1.0"	"53.1"	"47.3"	""	"775"	"19"	"35.000"	"28.000"	"0.442865354731036"	"17"	"0.005309"	"0.05993"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVVEASEAAYK"	"[K].NSVVEASEAAYk.[E]"	"K12(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"748.89612"	"1496.78496"	"1496.77940"	"3.71"	"0.00278"	"5/122"	"5"	"122"	"274461.98828125"	"HCD"	"MS2"	"0"	"26.4"	"100.000"	"48.5390"	"14730"	"14730"	"14702"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.4"	""	"31.2"	""	"28.8"	""	"45.0"	""	"52.1"	"51.8"	""	"778"	"20"	"35.000"	"28.000"	"0.358054883411984"	"14"	"0.004942"	"0.05476"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVEDKDGYR"	"[R].gVEDkDGYR.[M]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"499.60791"	"1496.80918"	"1496.81093"	"-1.17"	"-0.00058"	"5/78"	"5"	"78"	"7322463.50689697"	"HCD"	"MS2"	"11.92321"	"425.9"	"100.000"	"30.9392"	"7596"	"7596"	"7585"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1279.0"	""	"636.2"	""	"396.5"	""	"655.3"	""	"516.6"	"523.5"	""	"847"	"4"	"36.000"	"29.000"	"15.9901822856914"	"13"	"0.008668"	"0.1103"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGSPAEAAALR"	"[R].vEPGSPAEAAALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"2"	"2"	"0.9123"	"0.0000"	"1"	"1"	"1"	"748.91614"	"1496.82500"	"1496.82702"	"-1.35"	"-0.00101"	"10/108"	"10"	"108"	"864443.522827148"	"HCD"	"MS2"	"33.63986"	"39.0"	"100.000"	"55.3269"	"17508"	"17508"	"17479"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.1"	""	"37.2"	""	"48.0"	""	"67.3"	"2.3"	"90.3"	"90.3"	""	"847"	"57"	"36.000"	"29.000"	"7.77773988408025E-05"	"21"	"0"	"7.538E-05"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGSPAEAAALR"	"[R].vEPGSPAEAAALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"748.91656"	"1496.82585"	"1496.82702"	"-0.78"	"-0.00058"	"9/108"	"9"	"108"	"559269.778930664"	"HCD"	"MS2"	"17.75979"	"29.9"	"100.000"	"55.6540"	"17641"	"17641"	"17621"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.1"	""	"36.6"	"2.2"	"31.3"	""	"49.8"	"1.2"	"66.6"	"66.5"	""	"841"	"27"	"36.000"	"29.000"	"0.0795730491640212"	"22"	"0.000936"	"0.01156"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGSPAEAAALR"	"[R].vEPGSPAEAAALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"748.91681"	"1496.82634"	"1496.82702"	"-0.46"	"-0.00034"	"11/108"	"11"	"108"	"628136.170288086"	"HCD"	"MS2"	"8.383354"	"31.4"	"100.000"	"55.8425"	"17704"	"17704"	"17681"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.7"	""	"35.7"	""	"36.9"	""	"40.3"	"0.9"	"71.2"	"71.6"	""	"851"	"48"	"36.000"	"29.000"	"0.000725938056520829"	"18"	"0"	"0.0009783"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGSPAEAAALR"	"[R].vEPGSPAEAAALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"748.91748"	"1496.82768"	"1496.82702"	"0.44"	"0.00033"	"12/108"	"12"	"108"	"914588.698364258"	"HCD"	"MS2"	"28.93401"	"38.4"	"100.000"	"55.5385"	"17580"	"17580"	"17554"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.5"	""	"33.8"	""	"36.4"	""	"70.2"	"0.2"	"88.9"	"94.1"	""	"847"	"66"	"36.000"	"29.000"	"1.1935851713905E-05"	"20"	"0"	"1.794E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLMASDDFGR"	"[K].eQLMASDDFGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"749.36420"	"1497.72112"	"1497.72051"	"0.41"	"0.00030"	"10/112"	"10"	"112"	"384801.675170898"	"HCD"	"MS2"	"32.42107"	"34.5"	"100.000"	"65.5352"	"21608"	"21608"	"21581"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.3"	""	"43.9"	""	"38.0"	""	"53.6"	""	"61.9"	"76.8"	""	"470"	"6"	"33.000"	"26.000"	"6.50231286671705"	"13"	"0.001546"	"0.01918"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLMASDDFGR"	"[K].eQLMASDDFGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"749.36517"	"1497.72307"	"1497.72051"	"1.71"	"0.00128"	"8/112"	"8"	"112"	"871532.935791016"	"HCD"	"MS2"	"35.95994"	"51.9"	"100.000"	"65.2799"	"21519"	"21519"	"21501"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.6"	""	"65.9"	""	"53.7"	""	"77.7"	""	"116.9"	"125.8"	""	"471"	"34"	"33.000"	"26.000"	"0.00961592154813489"	"25"	"0"	"5.737E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAELYEEEMR"	"[R].vAELYEEEMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"749.37421"	"1497.74114"	"1497.74566"	"-3.02"	"-0.00226"	"6/82"	"6"	"82"	"287920.302856445"	"HCD"	"MS2"	"0"	"18.8"	"100.000"	"79.5250"	"27293"	"27293"	"27281"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.2"	""	"35.3"	""	"31.9"	""	"14.7"	""	"36.5"	"34.8"	""	"576"	"20"	"34.000"	"27.000"	"0.282743407589756"	"14"	"0.001211"	"0.01418"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAELYEEEMR"	"[R].vAELYEEEMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"749.37549"	"1497.74370"	"1497.74566"	"-1.31"	"-0.00098"	"8/82"	"8"	"82"	"553494.765014648"	"HCD"	"MS2"	"0"	"31.5"	"100.000"	"79.3198"	"27210"	"27210"	"27197"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.9"	""	"59.7"	""	"62.7"	""	"29.9"	"1.5"	"48.9"	"51.9"	""	"589"	"46"	"34.000"	"27.000"	"0.000789015071659205"	"15"	"0"	"4.433E-05"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAELYEEEMR"	"[R].vAELYEEEMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"749.37653"	"1497.74578"	"1497.74566"	"0.08"	"0.00006"	"8/82"	"8"	"82"	"517914.541687012"	"HCD"	"MS2"	"0"	"29.9"	"100.000"	"79.2761"	"27188"	"27188"	"27174"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.2"	""	"58.3"	""	"54.6"	""	"26.7"	""	"50.6"	"55.1"	""	"613"	"48"	"34.000"	"27.000"	"0.000520511679479524"	"15"	"0"	"6.281E-05"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESLTDPSK"	"[R].yESLTDPSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"749.41309"	"1497.81890"	"1497.82010"	"-0.80"	"-0.00060"	"14/76"	"14"	"76"	"1226935.95111084"	"HCD"	"MS2"	"0"	"92.9"	"100.000"	"59.0904"	"19043"	"19043"	"19021"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"144.5"	""	"131.5"	""	"138.9"	""	"133.9"	"0.1"	"156.6"	"173.9"	""	"874"	"37"	"36.000"	"29.000"	"0.00940765618074551"	"26"	"0"	"0.002499"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESLTDPSK"	"[R].yESLTDPSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"749.41382"	"1497.82036"	"1497.82010"	"0.18"	"0.00013"	"8/76"	"8"	"76"	"1074101.48852539"	"HCD"	"MS2"	"11.27525"	"86.6"	"100.000"	"59.3110"	"19118"	"19118"	"19096"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"137.2"	""	"126.1"	""	"139.6"	""	"120.4"	""	"150.5"	"150.8"	""	"902"	"34"	"36.000"	"29.000"	"0.0191062977688343"	"25"	"0"	"0.002133"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGMVQTEAQYR"	"[R].sGMVQTEAQYR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"749.87769"	"1498.74809"	"1498.75214"	"-2.70"	"-0.00202"	"10/104"	"10"	"104"	"317838.83001709"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"40.3008"	"11393"	"11393"	"11368"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.3"	""	"26.7"	""	"29.7"	""	"28.1"	""	"48.9"	"43.5"	""	"610"	"55"	"34.000"	"27.000"	"0.000100762710016228"	"23"	"0"	"7.321E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGMVQTEAQYR"	"[R].sGMVQTEAQYR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"749.88086"	"1498.75444"	"1498.75214"	"1.53"	"0.00115"	"8/104"	"8"	"104"	"251774.753173828"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"40.4945"	"11463"	"11463"	"11442"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.9"	""	"22.2"	""	"20.6"	""	"23.5"	"0.7"	"36.3"	"39.2"	""	"641"	"50"	"35.000"	"28.000"	"0.000330238751601538"	"21"	"0"	"0.0002316"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEEDEYK"	"[K].eVEEDEYk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.6047"	"0.0000"	"1"	"1"	"1"	"749.88654"	"1498.76579"	"1498.76773"	"-1.29"	"-0.00097"	"7/66"	"7"	"66"	"708720.990600586"	"HCD"	"MS2"	"0"	"70.5"	"100.000"	"44.9231"	"13258"	"13258"	"13232"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"148.5"	""	"66.4"	""	"74.6"	""	"118.4"	"0.9"	"142.9"	"115.6"	""	"636"	"43"	"35.000"	"28.000"	"0.00173951076200283"	""	"0"	"0.002027"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEEDEYK"	"[K].eVEEDEYk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"749.88776"	"1498.76824"	"1498.76773"	"0.34"	"0.00026"	"6/66"	"6"	"66"	"691558.901733398"	"HCD"	"MS2"	"0"	"68.5"	"100.000"	"44.7755"	"13209"	"13209"	"13185"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"135.4"	""	"61.5"	""	"67.0"	""	"122.4"	"0.6"	"143.1"	"119.3"	""	"679"	"42"	"35.000"	"28.000"	"0.00207414817455442"	""	"0"	"0.001841"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAPLNTPVTEDR"	"[K].gAPLNTPVTEDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"0"	"2"	"2"	"0.9216"	"0.0000"	"1"	"1"	"1"	"749.90625"	"1498.80522"	"1498.80629"	"-0.71"	"-0.00053"	"11/112"	"11"	"112"	"951504.121582031"	"HCD"	"MS2"	"28.71597"	"45.5"	"100.000"	"47.3232"	"14235"	"14235"	"14209"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.6"	""	"57.3"	""	"73.3"	""	"69.0"	"0.3"	"78.4"	"71.5"	""	"869"	"51"	"36.000"	"29.000"	"0.000366428952248577"	"20"	"0"	"3.525E-05"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAPLNTPVTEDR"	"[K].gAPLNTPVTEDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"0"	"2"	"2"	"0.9153"	"0.0000"	"1"	"1"	"1"	"749.90637"	"1498.80547"	"1498.80629"	"-0.55"	"-0.00041"	"10/112"	"10"	"112"	"1226840.815979"	"HCD"	"MS2"	"32.86507"	"55.1"	"100.000"	"47.0639"	"14141"	"14141"	"14110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.3"	""	"75.6"	""	"84.9"	""	"86.2"	""	"94.5"	"93.4"	""	"868"	"59"	"36.000"	"29.000"	"5.76089194654707E-05"	"21"	"0"	"2.146E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSPPLELEER"	"[R].sLSPPLELEER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P49816"	"Tuberin OS=Rattus norvegicus OX=10116 GN=Tsc2 PE=1 SV=1"	"P49816"	"Tuberin OS=Rattus norvegicus OX=10116 GN=Tsc2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"749.91962"	"1498.83196"	"1498.83144"	"0.35"	"0.00026"	"9/98"	"9"	"98"	"171770.792907715"	"HCD"	"MS2"	"30.0161"	"12.1"	"100.000"	"79.8918"	"27436"	"27436"	"27418"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.6"	""	"12.3"	""	"15.9"	""	"16.6"	""	"24.6"	"26.4"	""	"889"	"11"	"36.000"	"29.000"	"3.57167361311507"	"14"	"0.003967"	"0.04218"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEmR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"750.36511"	"1499.72295"	"1499.72493"	"-1.32"	"-0.00099"	"7/82"	"7"	"82"	"578365.305236816"	"HCD"	"MS2"	"0"	"31.8"	"100.000"	"69.3808"	"23176"	"23176"	"23155"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.5"	""	"37.4"	""	"45.5"	""	"59.2"	"0.9"	"59.0"	"51.9"	""	"485"	"34"	"33.000"	"26.000"	"0.00983358198462331"	"21"	"0.002056"	"0.02276"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEmR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"750.36536"	"1499.72344"	"1499.72493"	"-0.99"	"-0.00074"	"7/82"	"7"	"82"	"356895.145141602"	"HCD"	"MS2"	"0"	"22.4"	"100.000"	"70.3777"	"23596"	"23596"	"23576"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.8"	""	"27.9"	""	"26.7"	""	"34.6"	""	"50.8"	"53.0"	""	"477"	"32"	"33.000"	"26.000"	"0.0152576758262612"	"18"	"0"	"0.001789"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEmR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"750.36548"	"1499.72368"	"1499.72493"	"-0.83"	"-0.00062"	"7/82"	"7"	"82"	"188326.174560547"	"HCD"	"MS2"	"11.30283"	"13.0"	"100.000"	"77.5984"	"26522"	"26522"	"26499"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.7"	""	"16.1"	""	"18.2"	""	"18.7"	""	"26.3"	"27.7"	""	"475"	"18"	"33.000"	"26.000"	"0.344083315216881"	"14"	"0.0023"	"0.0239"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEmR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"750.36554"	"1499.72380"	"1499.72493"	"-0.75"	"-0.00056"	"8/82"	"8"	"82"	"504560.28125"	"HCD"	"MS2"	"3.426967"	"26.4"	"100.000"	"69.6871"	"23301"	"23301"	"23283"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.8"	""	"41.0"	""	"32.4"	""	"41.3"	""	"49.1"	"49.2"	""	"475"	"28"	"33.000"	"26.000"	"0.0379895031795984"	"15"	"0.0008629"	"0.0111"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEmR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"750.36566"	"1499.72405"	"1499.72493"	"-0.59"	"-0.00044"	"7/82"	"7"	"82"	"781504.114135742"	"HCD"	"MS2"	"0"	"39.2"	"100.000"	"69.4964"	"23237"	"23237"	"23224"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.8"	""	"52.3"	""	"47.4"	""	"76.4"	""	"71.2"	"80.9"	""	"483"	"36"	"33.000"	"26.000"	"0.00574006929219907"	"24"	"0.001374"	"0.01717"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEmR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"750.36591"	"1499.72453"	"1499.72493"	"-0.26"	"-0.00020"	"7/82"	"7"	"82"	"451869.028686523"	"HCD"	"MS2"	"0"	"24.3"	"100.000"	"70.0565"	"23466"	"23466"	"23437"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.8"	""	"31.9"	""	"27.2"	""	"44.9"	"0.7"	"42.6"	"52.6"	""	"480"	"35"	"33.000"	"26.000"	"0.00847639607500695"	"15"	"0"	"0.002531"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEmR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"750.36597"	"1499.72466"	"1499.72493"	"-0.18"	"-0.00013"	"9/82"	"9"	"82"	"424691.936340332"	"HCD"	"MS2"	"0"	"21.6"	"100.000"	"70.1851"	"23504"	"23504"	"23477"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.1"	""	"25.2"	""	"28.2"	""	"38.3"	"1.0"	"37.0"	"45.4"	""	"480"	"30"	"33.000"	"26.000"	"0.0249580839798974"	"14"	"0.0006732"	"0.009029"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEmR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"3"	"750.36627"	"1499.72527"	"1499.72493"	"0.23"	"0.00017"	"12/82"	"12"	"82"	"253985.064453125"	"HCD"	"MS2"	"32.98419"	"16.7"	"100.000"	"75.6565"	"25724"	"25724"	"25701"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.0"	""	"29.0"	""	"22.5"	""	"26.8"	""	"25.6"	"34.0"	""	"488"	"10"	"33.000"	"26.000"	"2.37897471603042"	"20"	"0.006739"	"0.07587"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEmR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"750.36639"	"1499.72551"	"1499.72493"	"0.39"	"0.00029"	"7/82"	"7"	"82"	"457790.674377441"	"HCD"	"MS2"	"0"	"25.8"	"100.000"	"70.4853"	"23626"	"23626"	"23605"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.2"	""	"36.8"	""	"31.8"	""	"39.7"	"0.8"	"49.7"	"52.0"	""	"487"	"27"	"33.000"	"26.000"	"0.0455511101179073"	"14"	"0.0006732"	"0.008208"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEmR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"750.36694"	"1499.72661"	"1499.72493"	"1.12"	"0.00084"	"11/82"	"11"	"82"	"264317.968811035"	"HCD"	"MS2"	"31.16593"	"17.3"	"100.000"	"75.6648"	"25737"	"25737"	"25719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.2"	""	"25.8"	""	"21.8"	""	"24.6"	""	"31.0"	"33.7"	""	"499"	"10"	"33.000"	"26.000"	"2.72942113384887"	"17"	"0.006958"	"0.08117"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGQDYENLR"	"[K].yLGQDYENLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"750.38690"	"1499.76653"	"1499.76917"	"-1.76"	"-0.00132"	"8/88"	"8"	"88"	"696770.760742188"	"HCD"	"MS2"	"24.54074"	"39.6"	"100.000"	"68.1991"	"22708"	"22708"	"22687"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.9"	""	"52.7"	""	"57.3"	""	"51.8"	"1.3"	"62.8"	"66.5"	""	"670"	"35"	"35.000"	"28.000"	"0.00970610101879942"	"15"	"0"	"0.0001602"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGQDYENLR"	"[K].yLGQDYENLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"750.38733"	"1499.76738"	"1499.76917"	"-1.19"	"-0.00090"	"7/88"	"7"	"88"	"547639.021728516"	"HCD"	"MS2"	"16.64049"	"34.9"	"100.000"	"68.5106"	"22835"	"22835"	"22815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.7"	""	"38.0"	""	"47.0"	""	"48.6"	""	"62.1"	"73.4"	""	"666"	"36"	"35.000"	"28.000"	"0.00850049533786195"	"16"	"0"	"0.0004169"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGQDYENLR"	"[K].yLGQDYENLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"750.38776"	"1499.76824"	"1499.76917"	"-0.63"	"-0.00047"	"7/88"	"7"	"88"	"472523.864624023"	"HCD"	"MS2"	"20.72285"	"28.8"	"100.000"	"68.6753"	"22888"	"22888"	"22869"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.7"	""	"32.3"	""	"36.9"	""	"36.9"	""	"57.6"	"55.4"	""	"683"	"31"	"35.000"	"28.000"	"0.0253741035591724"	"14"	"0"	"0.0004605"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGQDYENLR"	"[K].yLGQDYENLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"750.38824"	"1499.76921"	"1499.76917"	"0.03"	"0.00002"	"8/88"	"8"	"88"	"757118.969726563"	"HCD"	"MS2"	"11.24164"	"39.7"	"100.000"	"68.3594"	"22759"	"22759"	"22742"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"73.8"	""	"42.8"	""	"52.8"	""	"63.4"	"1.0"	"71.3"	"70.9"	""	"689"	"37"	"35.000"	"28.000"	"0.0066250510060955"	"18"	"0"	"0.0002536"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEPLDTEGAAR"	"[R].tLEPLDTEGAAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99P96"	"Histone deacetylase 7 (Fragment) OS=Rattus norvegicus OX=10116 GN=Hdac7 PE=1 SV=1"	"Q99P96"	"Histone deacetylase 7 (Fragment) OS=Rattus norvegicus OX=10116 GN=Hdac7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"751.40588"	"1501.80449"	"1501.80595"	"-0.97"	"-0.00073"	"10/102"	"10"	"102"	"169340.504943848"	"HCD"	"MS2"	"0"	"14.0"	"100.000"	"57.5308"	"18392"	"18392"	"18367"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.3"	""	"17.7"	""	"18.7"	""	"31.2"	""	"25.4"	"30.7"	""	"792"	"10"	"35.000"	"28.000"	"4.13709206811437"	"13"	"0.008777"	"0.1136"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEPLDTEGAAR"	"[R].tLEPLDTEGAAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99P96"	"Histone deacetylase 7 (Fragment) OS=Rattus norvegicus OX=10116 GN=Hdac7 PE=1 SV=1"	"Q99P96"	"Histone deacetylase 7 (Fragment) OS=Rattus norvegicus OX=10116 GN=Hdac7 PE=1 SV=1"	"0"	"2"	"2"	"0.1579"	"0.0000"	"1"	"1"	"1"	"751.40747"	"1501.80766"	"1501.80595"	"1.14"	"0.00086"	"5/102"	"5"	"102"	"228199.75982666"	"HCD"	"MS2"	"40.60147"	"15.2"	"100.000"	"57.3353"	"18327"	"18327"	"18297"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.9"	""	"16.6"	""	"20.5"	""	"29.4"	""	"32.3"	"27.9"	""	"816"	"19"	"36.000"	"29.000"	"0.528031903311595"	""	"0.0006732"	"0.008993"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGEPVQGLTK"	"[R].dGEPVQGLTk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"751.43469"	"1501.86211"	"1501.86263"	"-0.35"	"-0.00026"	"8/96"	"8"	"96"	"557018.542236328"	"HCD"	"MS2"	"43.07817"	"45.4"	"100.000"	"54.1911"	"17048"	"17048"	"17017"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"82.7"	""	"45.8"	""	"50.3"	""	"78.6"	""	"82.2"	"90.5"	""	"962"	"32"	"36.000"	"29.000"	"0.0284541146038403"	"18"	"0"	"0.0007638"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGEPVQGLTK"	"[R].dGEPVQGLTk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"751.43481"	"1501.86235"	"1501.86263"	"-0.18"	"-0.00014"	"7/96"	"7"	"96"	"588053.932128906"	"HCD"	"MS2"	"45.27077"	"46.2"	"100.000"	"54.4412"	"17135"	"17135"	"17104"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.7"	""	"52.7"	""	"53.9"	""	"78.1"	"2.1"	"77.7"	"97.0"	""	"962"	"39"	"36.000"	"29.000"	"0.00631168151428237"	"19"	"0"	"0.0002396"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAMGDAPDYDR"	"[R].yAMGDAPDYDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"751.84259"	"1502.67790"	"1502.67831"	"-0.27"	"-0.00020"	"8/90"	"8"	"90"	"2489635.12280273"	"HCD"	"MS2"	"63.48769"	"125.3"	"100.000"	"53.0932"	"16599"	"16599"	"16577"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"217.7"	""	"147.0"	""	"127.1"	""	"192.7"	"0.0"	"265.1"	"238.8"	""	"198"	"23"	"29.000"	"22.000"	"0.05207570937268"	"17"	"0"	"0.0007631"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAMGDAPDYDR"	"[R].yAMGDAPDYDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"751.84290"	"1502.67851"	"1502.67831"	"0.14"	"0.00010"	"10/90"	"10"	"90"	"2240554.19348145"	"HCD"	"MS2"	"47.14404"	"81.6"	"100.000"	"53.4299"	"16725"	"16725"	"16706"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"154.5"	""	"99.3"	""	"98.2"	""	"104.1"	""	"166.8"	"152.8"	""	"214"	"30"	"30.000"	"23.000"	"0.00969133882961074"	"18"	"0"	"0.0002978"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDSAFFWEER"	"[R].sDSAFFWEER.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2;Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2; Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"751.85834"	"1502.70940"	"1502.71132"	"-1.28"	"-0.00096"	"5/88"	"5"	"88"	"124379.264221191"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"90.2688"	"31519"	"31519"	"31507"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.7"	""	"13.3"	""	"10.2"	""	"15.6"	""	"15.7"	"17.9"	""	"349"	"10"	"32.000"	"25.000"	"1.72502515017636"	"15"	"0.003449"	"0.03303"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDSAFFWEER"	"[R].sDSAFFWEER.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2;Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2; Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.8551"	"0.0000"	"1"	"1"	"1"	"751.85883"	"1502.71037"	"1502.71132"	"-0.63"	"-0.00047"	"9/88"	"9"	"88"	"485413.475708008"	"HCD"	"MS2"	"0"	"26.4"	"100.000"	"90.5392"	"31623"	"31623"	"31613"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.9"	""	"28.8"	""	"34.0"	""	"40.9"	"1.6"	"51.2"	"47.8"	""	"350"	"69"	"32.000"	"25.000"	"2.21839076525123E-06"	""	"0"	"2.334E-06"	"1.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDSAFFWEER"	"[R].sDSAFFWEER.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2;Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2; Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"751.85913"	"1502.71099"	"1502.71132"	"-0.23"	"-0.00017"	"8/88"	"8"	"88"	"361647.565246582"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"90.6232"	"31661"	"31661"	"31645"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.8"	""	"14.9"	""	"19.3"	""	"19.4"	"0.4"	"25.7"	"24.7"	""	"358"	"50"	"32.000"	"25.000"	"0.000176951003943592"	"21"	"0"	"0.0001611"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDSAFFWEER"	"[R].sDSAFFWEER.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2;Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2; Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"751.86005"	"1502.71282"	"1502.71132"	"0.99"	"0.00075"	"7/88"	"7"	"88"	"166070.251342773"	"HCD"	"MS2"	"0"	"12.1"	"100.000"	"90.3206"	"31542"	"31542"	"31530"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.0"	""	"16.6"	""	"16.7"	""	"18.9"	""	"22.8"	"21.2"	""	"369"	"23"	"32.000"	"25.000"	"0.0922563717032525"	"14"	"0.001374"	"0.01685"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTTLNPDSEIAR"	"[K].gTTLNPDSEIAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P16573"	"Carcinoembryonic antigen-related cell adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Ceacam1 PE=1 SV=4"	"P16573"	"Carcinoembryonic antigen-related cell adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Ceacam1 PE=1 SV=4"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"751.90411"	"1502.80095"	"1502.80120"	"-0.17"	"-0.00013"	"9/116"	"9"	"116"	"438415.847106934"	"HCD"	"MS2"	"0"	"30.1"	"100.000"	"48.7776"	"14840"	"14840"	"14815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.5"	""	"32.7"	""	"36.8"	""	"47.1"	""	"73.2"	"64.2"	""	"876"	"29"	"36.000"	"29.000"	"0.0608799252471449"	"21"	"0"	"0.001281"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQIWDTAGQER"	"[K].aQIWDTAGQER.[Y]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.6136"	"0.0000"	"1"	"1"	"1"	"752.39081"	"1503.77434"	"1503.77532"	"-0.65"	"-0.00049"	"10/108"	"10"	"108"	"692418.334289551"	"HCD"	"MS2"	"11.82487"	"39.8"	"100.000"	"57.8486"	"18521"	"18521"	"18498"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.7"	""	"47.2"	""	"49.3"	""	"71.7"	"0.2"	"73.1"	"72.1"	""	"798"	"44"	"36.000"	"29.000"	"0.00176186608493972"	""	"0"	"2.567E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQIWDTAGQER"	"[K].aQIWDTAGQER.[Y]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.5854"	"0.0000"	"1"	"1"	"1"	"752.39087"	"1503.77446"	"1503.77532"	"-0.57"	"-0.00043"	"8/108"	"8"	"108"	"503895.512756348"	"HCD"	"MS2"	"0"	"28.3"	"100.000"	"57.9850"	"18592"	"18592"	"18575"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.4"	""	"33.5"	""	"34.0"	""	"44.2"	""	"56.6"	"58.0"	""	"798"	"41"	"36.000"	"29.000"	"0.0030406952500014"	""	"0"	"0.0001222"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQIWDTAGQER"	"[K].aQIWDTAGQER.[Y]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.6047"	"0.0000"	"1"	"1"	"1"	"752.39130"	"1503.77532"	"1503.77532"	"0.00"	"0.00000"	"8/108"	"8"	"108"	"558628.668701172"	"HCD"	"MS2"	"0"	"34.2"	"100.000"	"57.6324"	"18448"	"18448"	"18421"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.3"	""	"41.8"	""	"42.6"	""	"55.9"	"0.8"	"66.6"	"64.7"	""	"810"	"43"	"36.000"	"29.000"	"0.00216498565555774"	""	"0"	"5.924E-05"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQIWDTAGQER"	"[K].aQIWDTAGQER.[Y]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"752.39148"	"1503.77568"	"1503.77532"	"0.24"	"0.00018"	"9/108"	"9"	"108"	"654477.348327637"	"HCD"	"MS2"	"0"	"37.0"	"100.000"	"58.1435"	"18641"	"18641"	"18623"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.5"	""	"46.0"	""	"46.5"	""	"56.3"	""	"69.0"	"74.9"	""	"813"	"51"	"36.000"	"29.000"	"0.000307652571826026"	"26"	"0"	"1.082E-05"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMTEALGPGTIR"	"[K].eMTEALGPGTIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.7714"	"0.0000"	"1"	"1"	"1"	"501.93906"	"1503.80262"	"1503.80384"	"-0.82"	"-0.00041"	"7/106"	"7"	"106"	"2337151.10058594"	"HCD"	"MS2"	"42.94456"	"46.8"	"100.000"	"66.5563"	"22024"	"22024"	"22005"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.5"	""	"50.2"	""	"66.1"	""	"78.9"	"1.1"	"105.6"	"78.6"	""	"963"	"35"	"36.000"	"29.000"	"0.0145410675337357"	"23"	"0"	"0.0003321"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMTEALGPGTIR"	"[K].eMTEALGPGTIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"501.93939"	"1503.80362"	"1503.80384"	"-0.15"	"-0.00007"	"7/106"	"7"	"106"	"2415949.57446289"	"HCD"	"MS2"	"38.02037"	"50.8"	"100.000"	"66.4604"	"22000"	"22000"	"21981"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.8"	""	"61.4"	""	"64.4"	""	"84.9"	"1.0"	"102.3"	"100.9"	""	"1022"	"26"	"37.000"	"30.000"	"0.130143025907096"	"18"	"0"	"0.0004378"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMTEALGPGTIR"	"[K].eMTEALGPGTIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"752.40576"	"1503.80425"	"1503.80384"	"0.27"	"0.00020"	"11/106"	"11"	"106"	"2006160.31799316"	"HCD"	"MS2"	"0"	"91.7"	"100.000"	"66.4929"	"22014"	"22014"	"21997"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"163.8"	""	"137.4"	""	"151.8"	""	"81.4"	"0.6"	"166.5"	"166.3"	""	"1004"	"45"	"37.000"	"30.000"	"0.00162070404909974"	"19"	"0"	"5.817E-05"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMTEALGPGTIR"	"[K].eMTEALGPGTIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"752.40613"	"1503.80498"	"1503.80384"	"0.75"	"0.00057"	"8/106"	"8"	"106"	"1790008.31176758"	"HCD"	"MS2"	"0"	"90.8"	"100.000"	"66.5864"	"22037"	"22037"	"22021"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"158.7"	""	"136.7"	""	"147.0"	""	"79.5"	""	"164.2"	"173.8"	""	"997"	"36"	"36.000"	"29.000"	"0.0116591036347169"	"19"	"0"	"0.000182"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSDILEEQR"	"[K].aLTSDILEEQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY80"	"Ribosyldihydronicotinamide dehydrogenase [quinone] OS=Rattus norvegicus OX=10116 GN=Nqo2 PE=1 SV=3"	"Q6AY80"	"Ribosyldihydronicotinamide dehydrogenase [quinone] OS=Rattus norvegicus OX=10116 GN=Nqo2 PE=1 SV=3"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"752.41443"	"1503.82158"	"1503.82160"	"-0.01"	"-0.00001"	"11/94"	"11"	"94"	"234377.037231445"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"73.3404"	"24789"	"24789"	"24768"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.1"	""	"12.3"	""	"16.9"	""	"11.7"	""	"38.2"	"56.9"	""	"1007"	"29"	"37.000"	"30.000"	"0.059566142330762"	"23"	"0.001211"	"0.01421"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSDILEEQR"	"[K].aLTSDILEEQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY80"	"Ribosyldihydronicotinamide dehydrogenase [quinone] OS=Rattus norvegicus OX=10116 GN=Nqo2 PE=1 SV=3"	"Q6AY80"	"Ribosyldihydronicotinamide dehydrogenase [quinone] OS=Rattus norvegicus OX=10116 GN=Nqo2 PE=1 SV=3"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"1"	"752.41504"	"1503.82280"	"1503.82160"	"0.80"	"0.00060"	"7/94"	"7"	"94"	"353740.369506836"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"73.1014"	"24705"	"24705"	"24691"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.3"	""	"20.3"	""	"18.0"	""	"13.2"	""	"44.6"	"90.4"	""	"1007"	"27"	"37.000"	"30.000"	"0.0988551899386949"	""	"0.002056"	"0.02273"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNDGWVTTDPR"	"[R].dNDGWVTTDPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.8506"	"0.0000"	"1"	"1"	"1"	"752.86469"	"1504.72209"	"1504.72295"	"-0.57"	"-0.00043"	"9/114"	"9"	"114"	"1037272.59954834"	"HCD"	"MS2"	"0"	"41.4"	"100.000"	"51.6945"	"16028"	"16028"	"16005"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.3"	""	"42.7"	""	"38.7"	""	"89.0"	""	"87.2"	"80.4"	""	"417"	"87"	"33.000"	"26.000"	"4.3662244704491E-08"	""	"0"	"3.314E-05"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNDGWVTTDPR"	"[R].dNDGWVTTDPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"752.86493"	"1504.72258"	"1504.72295"	"-0.25"	"-0.00018"	"8/114"	"8"	"114"	"1128239.84863281"	"HCD"	"MS2"	"12.38019"	"50.5"	"100.000"	"52.0334"	"16155"	"16155"	"16133"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.0"	""	"53.1"	""	"50.3"	""	"110.2"	""	"113.0"	"95.4"	""	"415"	"42"	"33.000"	"26.000"	"0.00126478906177335"	"24"	"0"	"0.0004277"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNDGWVTTDPR"	"[R].dNDGWVTTDPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.8143"	"0.0000"	"1"	"1"	"1"	"752.86505"	"1504.72283"	"1504.72295"	"-0.08"	"-0.00006"	"8/114"	"8"	"114"	"1247699.27655029"	"HCD"	"MS2"	"0"	"46.3"	"100.000"	"52.3209"	"16273"	"16273"	"16256"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.7"	""	"52.8"	""	"43.4"	""	"98.9"	""	"103.3"	"85.6"	""	"418"	"70"	"33.000"	"26.000"	"2.18849866542638E-06"	""	"0"	"8.333E-05"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNDGWVTTDPR"	"[R].dNDGWVTTDPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.8736"	"0.0000"	"1"	"1"	"1"	"752.86517"	"1504.72307"	"1504.72295"	"0.08"	"0.00006"	"9/114"	"9"	"114"	"1553311.59417725"	"HCD"	"MS2"	"0"	"61.5"	"100.000"	"51.9844"	"16146"	"16146"	"16126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"76.4"	""	"74.7"	""	"56.9"	""	"127.7"	"1.1"	"140.7"	"106.2"	""	"421"	"87"	"33.000"	"26.000"	"4.12336803773011E-08"	""	"0"	"2.732E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVENSEDPK"	"[R].eVENSEDPk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"752.89807"	"1504.78887"	"1504.78952"	"-0.44"	"-0.00033"	"7/86"	"7"	"86"	"583532.514526367"	"HCD"	"MS2"	"0"	"48.5"	"100.000"	"32.9888"	"8421"	"8421"	"8401"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.7"	""	"36.7"	""	"41.1"	""	"101.8"	""	"114.5"	"113.3"	""	"908"	"29"	"36.000"	"29.000"	"0.0552148444293452"	"26"	"0.0008629"	"0.0101"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVENSEDPK"	"[R].eVENSEDPk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5366"	"0.0000"	"1"	"1"	"1"	"752.89941"	"1504.79155"	"1504.78952"	"1.35"	"0.00101"	"6/86"	"6"	"86"	"420520.233276367"	"HCD"	"MS2"	"0"	"30.5"	"100.000"	"32.8667"	"8378"	"8378"	"8350"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.1"	""	"22.0"	""	"21.6"	""	"63.9"	""	"69.9"	"62.2"	""	"927"	"41"	"36.000"	"29.000"	"0.0035403788568826"	""	"0.0001301"	"0.004405"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTYYTNEAK"	"[K].gTYYTNEAk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6XFR6"	"Glycophorin-C OS=Rattus norvegicus OX=10116 GN=Gypc PE=1 SV=1"	"Q6XFR6"	"Glycophorin-C OS=Rattus norvegicus OX=10116 GN=Gypc PE=1 SV=1"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"752.90442"	"1504.80156"	"1504.80478"	"-2.14"	"-0.00161"	"8/80"	"8"	"80"	"378658.095397949"	"HCD"	"MS2"	"0"	"43.9"	"100.000"	"41.2961"	"11787"	"11787"	"11763"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.2"	""	"64.6"	""	"49.7"	""	"59.7"	""	"92.0"	"91.6"	""	"896"	"37"	"36.000"	"29.000"	"0.00933851915627584"	"29"	"0"	"0.0009434"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTYYTNEAK"	"[K].gTYYTNEAk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6XFR6"	"Glycophorin-C OS=Rattus norvegicus OX=10116 GN=Gypc PE=1 SV=1"	"Q6XFR6"	"Glycophorin-C OS=Rattus norvegicus OX=10116 GN=Gypc PE=1 SV=1"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"752.90582"	"1504.80437"	"1504.80478"	"-0.27"	"-0.00021"	"8/80"	"8"	"80"	"390557.901245117"	"HCD"	"MS2"	"0"	"41.8"	"100.000"	"41.1644"	"11743"	"11743"	"11722"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.4"	""	"52.4"	""	"56.7"	""	"62.5"	"0.8"	"92.3"	"84.0"	""	"915"	"47"	"36.000"	"29.000"	"0.00092553127424531"	"21"	"0"	"0.0003577"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPGATAGGAEK"	"[R].mGPGATAGGAEk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"752.91272"	"1504.81816"	"1504.81938"	"-0.81"	"-0.00061"	"11/98"	"11"	"98"	"1169662.13128662"	"HCD"	"MS2"	"32.83547"	"78.6"	"100.000"	"39.3746"	"11015"	"11015"	"10991"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"127.0"	""	"101.6"	""	"108.2"	""	"94.6"	"1.2"	"159.9"	"152.9"	""	"1014"	"42"	"37.000"	"30.000"	"0.00289739668792636"	"17"	"0"	"4.193E-06"	"0.985"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVVPNEVVVQR"	"[K].hVVPNEVVVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"3"	"3"	"0.8222"	"0.0000"	"1"	"1"	"1"	"502.29764"	"1504.87836"	"1504.87973"	"-0.91"	"-0.00046"	"7/92"	"7"	"92"	"9007409.38470459"	"HCD"	"MS2"	"4.001097"	"119.7"	"100.000"	"40.4050"	"11427"	"11427"	"11410"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"154.8"	""	"133.3"	""	"157.0"	""	"203.8"	"2.3"	"241.7"	"243.1"	""	"916"	"45"	"36.000"	"29.000"	"0.0014957722713493"	"23"	"0"	"0.0009595"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSSGGEDGYVR"	"[K].sYSSGGEDGYVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA7"	"Eukaryotic translation initiation factor 3 subunit I OS=Rattus norvegicus OX=10116 GN=Eif3i PE=2 SV=1"	"B0BNA7"	"Eukaryotic translation initiation factor 3 subunit I OS=Rattus norvegicus OX=10116 GN=Eif3i PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"753.35699"	"1505.70671"	"1505.70697"	"-0.17"	"-0.00013"	"10/102"	"10"	"102"	"558773.209533691"	"HCD"	"MS2"	"0"	"33.7"	"100.000"	"36.6229"	"9893"	"9893"	"9864"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.2"	""	"37.1"	""	"41.1"	""	"52.4"	""	"63.5"	"65.0"	""	"333"	"72"	"32.000"	"25.000"	"9.80424686167055E-07"	"17"	"0"	"6.159E-08"	"1.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSSGGEDGYVR"	"[K].sYSSGGEDGYVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA7"	"Eukaryotic translation initiation factor 3 subunit I OS=Rattus norvegicus OX=10116 GN=Eif3i PE=2 SV=1"	"B0BNA7"	"Eukaryotic translation initiation factor 3 subunit I OS=Rattus norvegicus OX=10116 GN=Eif3i PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"753.35779"	"1505.70830"	"1505.70697"	"0.88"	"0.00067"	"10/102"	"10"	"102"	"452205.866882324"	"HCD"	"MS2"	"20.85143"	"28.0"	"100.000"	"36.3967"	"9807"	"9807"	"9783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"51.4"	""	"36.8"	""	"37.1"	""	"34.8"	""	"59.5"	"47.9"	""	"353"	"80"	"32.000"	"25.000"	"1.77723439552343E-07"	"17"	"0"	"1.236E-06"	"1.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMASAMK"	"[R].yDDmASAMk.[A]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"753.37231"	"1505.73735"	"1505.73802"	"-0.45"	"-0.00034"	"7/72"	"7"	"72"	"378589.357421875"	"HCD"	"MS2"	"40.05221"	"39.6"	"100.000"	"46.8657"	"14060"	"14060"	"14030"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.3"	""	"46.4"	""	"54.8"	""	"61.0"	"0.7"	"78.6"	"75.1"	""	"508"	"25"	"34.000"	"27.000"	"0.087868601967835"	"16"	"0.002973"	"0.02873"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDmAAAmk.[AN]"	"N-Term(TMT6plex); M4(Oxidation); M8(Oxidation); K9(TMT6plex)"	"1"	"2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"753.37231"	"1505.73735"	"1505.73802"	"-0.45"	"-0.00034"	"7/66"	"7"	"66"	"526044.006225586"	"HCD"	"MS2"	"0"	"38.1"	"100.000"	"38.1119"	"10500"	"10500"	"10475"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.4"	""	"30.3"	""	"41.6"	""	"106.8"	""	"66.1"	"69.5"	""	"508"	"32"	"34.000"	"27.000"	"0.0171330119035272"	"17"	"0.005874"	"0.06636"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMASAMK"	"[R].yDDMASAmk.[A]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"753.37250"	"1505.73772"	"1505.73802"	"-0.20"	"-0.00015"	"11/72"	"11"	"72"	"336637.332092285"	"HCD"	"MS2"	"20.66551"	"34.3"	"100.000"	"49.3206"	"15061"	"15061"	"15036"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"51.7"	""	"47.8"	""	"44.3"	""	"51.0"	"0.0"	"65.2"	"65.0"	""	"510"	"32"	"34.000"	"27.000"	"0.0168089343287302"	""	"0.0004639"	"0.007677"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMASAMK"	"[R].yDDMASAmk.[A]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"753.37262"	"1505.73796"	"1505.73802"	"-0.04"	"-0.00003"	"6/72"	"6"	"72"	"556791.354431152"	"HCD"	"MS2"	"41.93118"	"46.8"	"100.000"	"49.5632"	"15148"	"15148"	"15121"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.8"	""	"57.1"	""	"55.2"	""	"77.9"	"1.2"	"85.7"	"91.0"	""	"505"	"22"	"34.000"	"27.000"	"0.165295633951987"	"19"	"0.002871"	"0.0271"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDmAAAmk.[AN]"	"N-Term(TMT6plex); M4(Oxidation); M8(Oxidation); K9(TMT6plex)"	"1"	"2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"753.37305"	"1505.73882"	"1505.73802"	"0.53"	"0.00040"	"8/66"	"8"	"66"	"413014.893249512"	"HCD"	"MS2"	"0"	"28.6"	"100.000"	"37.9681"	"10434"	"10434"	"10413"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.1"	""	"24.2"	""	"29.4"	""	"75.0"	""	"57.9"	"54.9"	""	"512"	"35"	"34.000"	"27.000"	"0.00745143582225051"	"18"	"0.007627"	"0.092"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEDSEYYK"	"[K].nEDSEYYk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P51868"	"Calsequestrin-2 OS=Rattus norvegicus OX=10116 GN=Casq2 PE=1 SV=2"	"P51868"	"Calsequestrin-2 OS=Rattus norvegicus OX=10116 GN=Casq2 PE=1 SV=2"	"0"	"2"	"2"	"0.0769"	"0.0000"	"1"	"1"	"1"	"753.37946"	"1505.75163"	"1505.75241"	"-0.51"	"-0.00039"	"10/76"	"10"	"76"	"401058.115600586"	"HCD"	"MS2"	"14.56725"	"40.7"	"100.000"	"41.7940"	"12000"	"12000"	"11969"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"62.7"	""	"50.4"	""	"53.3"	""	"67.0"	"0.8"	"64.4"	"86.7"	""	"602"	"13"	"34.000"	"27.000"	"1.65793116618026"	"22"	"0.005921"	"0.0675"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQEDPDYGLR"	"[R].lAQEDPDYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"753.39172"	"1505.77617"	"1505.77974"	"-2.37"	"-0.00178"	"8/102"	"8"	"102"	"1259004.62011719"	"HCD"	"MS2"	"0"	"57.2"	"100.000"	"61.9853"	"20187"	"20187"	"20171"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"107.2"	""	"63.5"	""	"81.1"	""	"93.5"	""	"97.3"	"98.8"	""	"847"	"47"	"36.000"	"29.000"	"0.000948098402183692"	"23"	"0"	"0.0009544"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQEDPDYGLR"	"[R].lAQEDPDYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.8772"	"0.0000"	"1"	"1"	"1"	"502.59744"	"1505.77777"	"1505.77974"	"-1.30"	"-0.00065"	"13/102"	"13"	"102"	"3078047.88647461"	"HCD"	"MS2"	"20.79857"	"47.2"	"100.000"	"62.2625"	"20297"	"20297"	"20285"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.5"	""	"57.2"	""	"60.4"	""	"83.7"	"2.1"	"93.4"	"81.1"	""	"863"	"57"	"36.000"	"29.000"	"8.09060130231091E-05"	"23"	"0"	"0.0002305"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQEDPDYGLR"	"[R].lAQEDPDYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"753.39258"	"1505.77788"	"1505.77974"	"-1.23"	"-0.00093"	"7/102"	"7"	"102"	"698675.986755371"	"HCD"	"MS2"	"0"	"36.5"	"100.000"	"62.0723"	"20207"	"20207"	"20195"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"69.0"	""	"47.3"	""	"49.1"	""	"58.5"	"1.4"	"56.6"	"63.1"	""	"865"	"42"	"36.000"	"29.000"	"0.00254089144969128"	"17"	"0"	"0.002172"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQEDPDYGLR"	"[R].lAQEDPDYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"753.39288"	"1505.77849"	"1505.77974"	"-0.83"	"-0.00062"	"9/102"	"9"	"102"	"7975799.46960449"	"HCD"	"MS2"	"0"	"296.0"	"100.000"	"62.2581"	"20296"	"20296"	"20285"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"545.5"	""	"363.0"	""	"408.4"	""	"472.2"	"0.1"	"515.6"	"494.5"	""	"881"	"56"	"36.000"	"29.000"	"0.000121883779480377"	"23"	"0"	"4.36E-06"	"0.981"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQEDPDYGLR"	"[R].lAQEDPDYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.8537"	"0.0000"	"1"	"1"	"1"	"502.59769"	"1505.77851"	"1505.77974"	"-0.82"	"-0.00041"	"11/102"	"11"	"102"	"1973679.40814209"	"HCD"	"MS2"	"17.19651"	"32.7"	"100.000"	"62.5905"	"20414"	"20414"	"20395"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.8"	""	"44.9"	""	"45.2"	""	"49.3"	"0.5"	"66.5"	"58.3"	""	"881"	"41"	"36.000"	"29.000"	"0.00347492881810973"	"21"	"0"	"0.001093"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQEDPDYGLR"	"[R].lAQEDPDYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8431"	"0.0000"	"1"	"1"	"1"	"753.39307"	"1505.77886"	"1505.77974"	"-0.59"	"-0.00044"	"10/102"	"10"	"102"	"7489343.72821045"	"HCD"	"MS2"	"0"	"280.8"	"100.000"	"62.3474"	"20316"	"20316"	"20305"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"543.6"	""	"357.3"	""	"389.9"	""	"439.6"	""	"457.2"	"470.0"	""	"887"	"51"	"36.000"	"29.000"	"0.000328014939488328"	"24"	"0"	"6.11E-06"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQEDPDYGLR"	"[R].lAQEDPDYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.8810"	"0.0000"	"1"	"1"	"1"	"502.59784"	"1505.77896"	"1505.77974"	"-0.51"	"-0.00026"	"12/102"	"12"	"102"	"1349206.15875244"	"HCD"	"MS2"	"29.34743"	"28.7"	"100.000"	"62.5728"	"20423"	"20423"	"20404"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.2"	""	"30.7"	""	"35.0"	""	"46.5"	""	"69.2"	"59.0"	""	"887"	"42"	"36.000"	"29.000"	"0.00253450775363973"	"20"	"0"	"0.0008722"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQEDPDYGLR"	"[R].lAQEDPDYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"502.59787"	"1505.77906"	"1505.77974"	"-0.45"	"-0.00023"	"11/102"	"11"	"102"	"2230856.42156982"	"HCD"	"MS2"	"12.51336"	"39.6"	"100.000"	"62.2991"	"20296"	"20296"	"20284"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.8"	""	"49.8"	""	"46.0"	""	"68.5"	"0.2"	"81.6"	"71.8"	""	"885"	"26"	"36.000"	"29.000"	"0.11295703264276"	"24"	"0"	"0.003288"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDGVLTEGEGPR"	"[R].fDGVLTEGEGPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"0"	"2"	"2"	"0.9254"	"0.0000"	"1"	"1"	"1"	"753.39331"	"1505.77934"	"1505.77974"	"-0.26"	"-0.00020"	"10/102"	"10"	"102"	"532298.867004395"	"HCD"	"MS2"	"23.58999"	"35.7"	"100.000"	"74.3332"	"25206"	"25206"	"25185"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.4"	""	"46.1"	""	"53.7"	""	"55.2"	""	"60.8"	"67.9"	""	"880"	"67"	"36.000"	"29.000"	"7.91503202656666E-06"	"22"	"0"	"7.198E-06"	"0.934"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDGVLTEGEGPR"	"[R].fDGVLTEGEGPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"753.39337"	"1505.77947"	"1505.77974"	"-0.18"	"-0.00014"	"17/102"	"17"	"102"	"505547.290771484"	"HCD"	"MS2"	"35.32053"	"33.8"	"100.000"	"74.4773"	"25251"	"25251"	"25233"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.9"	""	"43.8"	""	"41.8"	""	"63.8"	"0.8"	"64.3"	"55.3"	""	"879"	"57"	"36.000"	"29.000"	"9.43971493380369E-05"	"25"	"0"	"4.409E-05"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQEDPDYGLR"	"[R].lAQEDPDYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"753.39368"	"1505.78008"	"1505.77974"	"0.22"	"0.00017"	"9/102"	"9"	"102"	"3474875.12896729"	"HCD"	"MS2"	"0"	"149.8"	"100.000"	"62.5591"	"20418"	"20418"	"20404"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"266.1"	""	"189.3"	""	"206.7"	""	"236.2"	"0.9"	"247.1"	"271.1"	""	"890"	"56"	"36.000"	"29.000"	"0.00010650255116004"	"23"	"0"	"1.017E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQEDPDYGLR"	"[R].lAQEDPDYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"753.39404"	"1505.78081"	"1505.77974"	"0.71"	"0.00054"	"9/102"	"9"	"102"	"4022932.69091797"	"HCD"	"MS2"	"0"	"156.3"	"100.000"	"62.6642"	"20444"	"20444"	"20427"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"276.0"	""	"194.0"	""	"215.9"	""	"252.7"	""	"273.0"	"269.0"	""	"893"	"58"	"36.000"	"29.000"	"6.57387532336208E-05"	"24"	"0"	"1.283E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGVTEISAADK"	"[K].gGVTEISAADk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"0"	"2"	"2"	"0.7612"	"0.0000"	"1"	"1"	"1"	"753.43109"	"1505.85491"	"1505.85754"	"-1.75"	"-0.00132"	"9/92"	"9"	"92"	"529726.488586426"	"HCD"	"MS2"	"46.32114"	"46.7"	"100.000"	"52.5647"	"16372"	"16372"	"16345"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.5"	""	"52.2"	""	"60.5"	""	"83.8"	""	"99.7"	"95.9"	""	"1011"	"67"	"37.000"	"30.000"	"9.78861302775012E-06"	""	"0"	"9.291E-07"	"1.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGVTEISAADK"	"[K].gGVTEISAADk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"753.43176"	"1505.85625"	"1505.85754"	"-0.86"	"-0.00065"	"9/92"	"9"	"92"	"500401.278015137"	"HCD"	"MS2"	"11.19041"	"45.3"	"100.000"	"52.2694"	"16263"	"16263"	"16236"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.9"	""	"50.4"	""	"59.2"	""	"81.2"	""	"89.5"	"96.5"	""	"973"	"55"	"36.000"	"29.000"	"0.000140955765541669"	"23"	"0"	"4.561E-06"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSQQEDITK"	"[R].vSQQEDITk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8033"	"0.0000"	"1"	"1"	"1"	"753.43201"	"1505.85674"	"1505.85754"	"-0.54"	"-0.00040"	"16/88"	"16"	"88"	"1550140.46209717"	"HCD"	"MS2"	"0"	"121.9"	"100.000"	"43.8091"	"12820"	"12820"	"12800"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"216.3"	""	"135.5"	""	"144.9"	""	"188.8"	""	"233.5"	"239.1"	""	"971"	"61"	"36.000"	"29.000"	"4.1227712063013E-05"	"28"	"0"	"0.00021"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSQQEDITK"	"[R].vSQQEDITk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"753.43207"	"1505.85686"	"1505.85754"	"-0.45"	"-0.00034"	"14/88"	"14"	"88"	"977013.707824707"	"HCD"	"MS2"	"0"	"81.4"	"100.000"	"43.8924"	"12843"	"12843"	"12824"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"142.5"	""	"97.3"	""	"94.2"	""	"134.3"	"0.9"	"147.1"	"154.6"	""	"971"	"49"	"36.000"	"29.000"	"0.000619711041677908"	"26"	"0"	"0.0003202"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSQQEDITK"	"[R].vSQQEDITk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"753.43286"	"1505.85845"	"1505.85754"	"0.60"	"0.00045"	"7/88"	"7"	"88"	"322876.939147949"	"HCD"	"MS2"	"11.1008"	"29.7"	"100.000"	"44.2428"	"12982"	"12982"	"12955"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.2"	""	"34.0"	""	"33.1"	""	"55.3"	""	"60.7"	"62.1"	""	"941"	"28"	"36.000"	"29.000"	"0.0732081829670188"	"21"	"0.006958"	"0.08057"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKEVYELLDSPGR"	"[K].TKEVYELLDSPGR.[V]"	""	"1"	"1"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"1"	"2"	"2"	"0.2264"	"0.0000"	"1"	"1"	"1"	"753.90332"	"1506.79936"	"1506.77985"	"12.95"	"0.00976"	"8/136"	"8"	"136"	"426221.205627441"	"HCD"	"MS2"	"0"	"19.4"	"100.000"	"86.9070"	"30221"	"30221"	"30206"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.6"	""	"24.9"	""	"20.1"	""	"34.2"	""	"39.4"	"34.3"	"NoQuanLabels"	"993"	"53"	"36.000"	"29.000"	"0.000235461145681711"	"28"	"0.003449"	"0.03463"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKEVYELLDSPGR"	"[K].TKEVYELLDSPGR.[V]"	""	"1"	"1"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"1"	"2"	"2"	"0.2679"	"0.0000"	"1"	"1"	"1"	"753.90338"	"1506.79949"	"1506.77985"	"13.03"	"0.00982"	"7/136"	"7"	"136"	"340804.432983398"	"HCD"	"MS2"	"0"	"16.7"	"100.000"	"86.9258"	"30224"	"30224"	"30219"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.3"	""	"22.1"	""	"24.1"	""	"28.0"	""	"32.7"	"28.4"	"NoQuanLabels"	"988"	"56"	"36.000"	"29.000"	"0.00012294955152315"	"28"	"0.001374"	"0.01651"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLQEEVNINR"	"[K].yLQEEVNINR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"753.90820"	"1506.80913"	"1506.81137"	"-1.49"	"-0.00112"	"7/88"	"7"	"88"	"258920.803283691"	"HCD"	"MS2"	"34.76127"	"22.3"	"100.000"	"64.2844"	"21119"	"21119"	"21097"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.2"	""	"26.8"	""	"26.9"	""	"39.0"	""	"37.6"	"48.6"	""	"1032"	"37"	"37.000"	"30.000"	"0.00974203536133686"	"19"	"0"	"0.002096"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYNAQEYYDR"	"[R].gYNAQEYYDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.35480"	"1507.70232"	"1507.70149"	"0.55"	"0.00042"	"7/92"	"7"	"92"	"741924.930297852"	"HCD"	"MS2"	"14.83802"	"52.1"	"100.000"	"44.9229"	"13269"	"13269"	"13241"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"98.8"	""	"59.7"	""	"53.6"	""	"59.9"	""	"66.6"	"155.5"	""	"307"	"25"	"31.000"	"24.000"	"0.0475453862429745"	"14"	"0.0003538"	"0.006899"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYNAQEYYDR"	"[R].gYNAQEYYDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.35492"	"1507.70256"	"1507.70149"	"0.71"	"0.00054"	"7/92"	"7"	"92"	"470934.379455566"	"HCD"	"MS2"	"24.92664"	"33.4"	"100.000"	"44.9667"	"13276"	"13276"	"13247"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.2"	""	"35.8"	""	"45.3"	""	"34.4"	""	"50.3"	"91.9"	""	"313"	"22"	"31.000"	"24.000"	"0.09194208367091"	"14"	"0.0001301"	"0.004672"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.40198"	"1507.79668"	"1507.79876"	"-1.38"	"-0.00104"	"5/102"	"5"	"102"	"204241.579467773"	"HCD"	"MS2"	"36.17027"	"16.5"	"100.000"	"67.4278"	"22380"	"22380"	"22354"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.2"	""	"20.2"	""	"23.0"	""	"20.9"	"1.1"	"30.2"	"32.0"	""	"945"	"13"	"36.000"	"29.000"	"2.12032196743405"	"13"	"0.004942"	"0.05592"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.40198"	"1507.79668"	"1507.79876"	"-1.38"	"-0.00104"	"9/102"	"9"	"102"	"189369.552307129"	"HCD"	"MS2"	"0"	"16.5"	"100.000"	"56.4072"	"17948"	"17948"	"17926"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.9"	""	"19.4"	""	"19.3"	""	"36.6"	""	"31.6"	"27.5"	""	"945"	"24"	"36.000"	"29.000"	"0.192044473030563"	"14"	"0.008478"	"0.104"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDDFVETGNIR"	"[K].lDDFVETGNIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"754.40198"	"1507.79668"	"1507.79539"	"0.86"	"0.00065"	"4/94"	"4"	"94"	"112213.617919922"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"87.3725"	"30405"	"30405"	"30390"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.0"	""	"12.7"	""	"11.2"	""	"11.3"	""	"13.6"	"14.6"	""	"945"	"13"	"36.000"	"29.000"	"2.19483467542749"	"16"	"0.006685"	"0.07509"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.40247"	"1507.79766"	"1507.79876"	"-0.73"	"-0.00055"	"9/102"	"9"	"102"	"216783.11114502"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"70.0282"	"23440"	"23440"	"23417"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.9"	""	"15.0"	""	"16.4"	""	"22.1"	""	"20.7"	"27.3"	""	"942"	"6"	"36.000"	"29.000"	"11.8309850924101"	"13"	"0.008668"	"0.1107"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.40247"	"1507.79766"	"1507.79876"	"-0.73"	"-0.00055"	"9/102"	"9"	"102"	"215294.834350586"	"HCD"	"MS2"	"25.06455"	"16.6"	"100.000"	"67.2857"	"22337"	"22337"	"22316"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.5"	""	"25.2"	""	"22.8"	""	"19.4"	""	"35.3"	"31.2"	""	"942"	"5"	"36.000"	"29.000"	"14.1912583739166"	"13"	"0.007413"	"0.08863"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGDVSQDAEK"	"[K].tGDVSQDAEk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"754.40265"	"1507.79802"	"1507.80042"	"-1.59"	"-0.00120"	"14/96"	"14"	"96"	"398475.87677002"	"HCD"	"MS2"	"0"	"34.6"	"100.000"	"34.5179"	"9045"	"9045"	"9015"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.2"	""	"32.2"	""	"32.9"	""	"74.6"	"0.0"	"70.3"	"66.0"	""	"941"	"46"	"36.000"	"29.000"	"0.00117100736825187"	"24"	"0"	"4.004E-05"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"754.40271"	"1507.79814"	"1507.79876"	"-0.41"	"-0.00031"	"11/102"	"11"	"102"	"1589726.91705322"	"HCD"	"MS2"	"4.942005"	"75.4"	"100.000"	"56.1007"	"17823"	"17823"	"17805"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.3"	""	"88.6"	""	"89.3"	""	"205.4"	"0.6"	"131.0"	"129.8"	""	"941"	"48"	"36.000"	"29.000"	"0.000834756150758824"	"23"	"0"	"0.0004589"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"754.40277"	"1507.79827"	"1507.79876"	"-0.33"	"-0.00025"	"9/102"	"9"	"102"	"2105865.34014893"	"HCD"	"MS2"	"7.725101"	"80.2"	"100.000"	"55.4950"	"17576"	"17576"	"17559"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.8"	""	"89.2"	""	"100.7"	""	"244.7"	""	"133.5"	"128.9"	""	"940"	"50"	"36.000"	"29.000"	"0.000511797143866713"	"23"	"0"	"5.759E-06"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8679"	"0.0000"	"1"	"1"	"1"	"754.40295"	"1507.79863"	"1507.79876"	"-0.08"	"-0.00006"	"17/102"	"17"	"102"	"6321274.38653564"	"HCD"	"MS2"	"0"	"209.4"	"100.000"	"55.7923"	"17698"	"17698"	"17681"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"168.0"	""	"230.3"	""	"255.6"	""	"622.4"	""	"382.1"	"327.8"	""	"954"	"53"	"36.000"	"29.000"	"0.000265166330717983"	"23"	"0"	"3.654E-06"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"754.40308"	"1507.79888"	"1507.79876"	"0.08"	"0.00006"	"11/102"	"11"	"102"	"1396068.39337158"	"HCD"	"MS2"	"2.566448"	"64.4"	"100.000"	"56.2871"	"17885"	"17885"	"17867"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.1"	""	"77.4"	""	"80.5"	""	"179.6"	""	"107.7"	"108.7"	""	"945"	"47"	"36.000"	"29.000"	"0.000938429848451357"	"23"	"0"	"8.692E-06"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"754.40326"	"1507.79924"	"1507.79876"	"0.32"	"0.00024"	"7/102"	"7"	"102"	"221212.023864746"	"HCD"	"MS2"	"0"	"18.3"	"100.000"	"56.6096"	"18017"	"18017"	"17988"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.6"	""	"29.2"	""	"22.9"	""	"38.2"	""	"33.5"	"33.0"	""	"939"	"24"	"36.000"	"29.000"	"0.169681930509298"	"24"	"0.004069"	"0.04397"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"754.40332"	"1507.79936"	"1507.79876"	"0.40"	"0.00030"	"9/102"	"9"	"102"	"6304674.52746582"	"HCD"	"MS2"	"1.197494"	"211.9"	"100.000"	"55.9740"	"17758"	"17758"	"17741"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"172.9"	""	"224.5"	""	"277.9"	""	"616.2"	"0.9"	"365.9"	"350.5"	""	"939"	"53"	"36.000"	"29.000"	"0.000210685960573606"	"23"	"0"	"1.038E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.40338"	"1507.79949"	"1507.79876"	"0.48"	"0.00036"	"10/102"	"10"	"102"	"150337.889038086"	"HCD"	"MS2"	"43.85913"	"11.0"	"100.000"	"69.0742"	"23051"	"23051"	"23028"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.6"	""	"15.8"	""	"16.1"	""	"15.5"	""	"21.9"	"22.0"	""	"937"	"20"	"36.000"	"29.000"	"0.46634743802919"	"14"	"0.005369"	"0.06109"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"754.40363"	"1507.79997"	"1507.79876"	"0.81"	"0.00061"	"17/102"	"17"	"102"	"1824902.79156494"	"HCD"	"MS2"	"16.47448"	"71.7"	"100.000"	"55.6790"	"17637"	"17637"	"17618"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"64.1"	""	"74.8"	""	"92.2"	""	"209.3"	"0.2"	"123.7"	"114.7"	""	"941"	"49"	"36.000"	"29.000"	"0.000570899454143773"	"23"	"0"	"1.614E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDLEEELK"	"[K].sSDLEEELk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"3"	"3"	"0.1250"	"0.0000"	"1"	"1"	"1"	"503.27966"	"1507.82444"	"1507.82557"	"-0.76"	"-0.00038"	"5/76"	"5"	"76"	"2125425.6920166"	"HCD"	"MS2"	"13.48135"	"67.9"	"100.000"	"66.3028"	"21921"	"21921"	"21896"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.6"	""	"65.9"	""	"73.6"	""	"129.1"	""	"148.0"	"143.4"	""	"1033"	"32"	"37.000"	"30.000"	"0.0322901695818642"	""	"0"	"0.002911"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDLEEELK"	"[K].sSDLEEELk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"3"	"3"	"0.1250"	"0.0000"	"1"	"1"	"1"	"503.27975"	"1507.82471"	"1507.82557"	"-0.57"	"-0.00029"	"5/76"	"5"	"76"	"1813958.4230957"	"HCD"	"MS2"	"17.75285"	"59.8"	"100.000"	"66.1652"	"21880"	"21880"	"21860"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.4"	""	"61.3"	""	"73.0"	""	"113.9"	""	"121.3"	"120.4"	""	"1030"	"32"	"37.000"	"30.000"	"0.0332511927952848"	""	"0.0001301"	"0.00432"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDLEEELK"	"[K].sSDLEEELk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"754.41602"	"1507.82475"	"1507.82557"	"-0.54"	"-0.00041"	"14/76"	"14"	"76"	"3561883.70812988"	"HCD"	"MS2"	"0"	"278.0"	"100.000"	"66.4364"	"21975"	"21975"	"21957"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"331.2"	""	"249.8"	""	"288.1"	""	"574.1"	""	"588.1"	"615.2"	""	"1030"	"38"	"37.000"	"30.000"	"0.00858632314463797"	""	"0"	"0.001345"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDLEEELK"	"[K].sSDLEEELk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.3415"	"0.0000"	"1"	"1"	"1"	"754.41644"	"1507.82561"	"1507.82557"	"0.02"	"0.00002"	"14/76"	"14"	"76"	"2034976.95843506"	"HCD"	"MS2"	"7.124578"	"171.8"	"100.000"	"66.0871"	"21848"	"21848"	"21828"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"219.0"	""	"174.0"	""	"162.2"	""	"362.6"	""	"353.0"	"365.0"	""	"1027"	"41"	"37.000"	"30.000"	"0.00452418596289615"	""	"0"	"0.001136"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDLEEELK"	"[K].sSDLEEELk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.3784"	"0.0000"	"1"	"1"	"1"	"754.41675"	"1507.82622"	"1507.82557"	"0.43"	"0.00032"	"7/76"	"7"	"76"	"1483739.88348389"	"HCD"	"MS2"	"15.29063"	"130.3"	"100.000"	"66.1369"	"21853"	"21853"	"21832"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"173.2"	""	"121.2"	""	"140.0"	""	"262.5"	"0.3"	"274.0"	"266.5"	""	"1027"	"37"	"37.000"	"30.000"	"0.00980709648273763"	""	"0"	"0.0009534"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASTDIAGLEESFR"	"[M].aASTDIAGLEESFR.[K]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.9483"	"0.0000"	"1"	"1"	"1"	"754.86469"	"1508.72209"	"1508.72273"	"-0.42"	"-0.00032"	"8/122"	"8"	"122"	"129314.185241699"	"HCD"	"MS2"	"0"	"1.4"	"100.000"	"108.0231"	"37670"	"37670"	"37663"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	"4.3"	""	"2.0"	""	"4.9"	""	""	"2.0"	"NoQuanLabels"	"451"	"58"	"33.000"	"26.000"	"3.61531835600604E-05"	"19"	"0"	"0.0006847"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASTDIAGLEESFR"	"[M].aASTDIAGLEESFR.[K]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.8246"	"0.0000"	"1"	"1"	"1"	"754.86517"	"1508.72307"	"1508.72273"	"0.23"	"0.00017"	"8/122"	"8"	"122"	"118833.122375488"	"HCD"	"MS2"	"0"	"0.8"	"100.000"	"108.0781"	"37609"	"37609"	"37601"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	""	""	"3.2"	""	""	"4.3"	"NoQuanLabels"	"468"	"57"	"33.000"	"26.000"	"4.3272885684087E-05"	""	"0"	"8.774E-05"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFSDNQLQEGK"	"[R].NFSDNQLQEGk.[N]"	"K11(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"754.88049"	"1508.75371"	"1508.75425"	"-0.36"	"-0.00027"	"5/112"	"5"	"112"	"175522.299682617"	"HCD"	"MS2"	"0"	"14.4"	"100.000"	"43.1352"	"12537"	"12537"	"12508"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.4"	""	"14.2"	""	"13.9"	""	"19.7"	""	"40.3"	"26.0"	""	"738"	"20"	"35.000"	"28.000"	"0.337307786102522"	"19"	"0.008052"	"0.09855"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVDLTMDDIR"	"[K].wVDLTmDDIR.[R]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"754.88416"	"1508.76103"	"1508.76165"	"-0.41"	"-0.00031"	"6/82"	"6"	"82"	"117855.289855957"	"HCD"	"MS2"	"9.348631"	"6.1"	"100.000"	"94.0806"	"32982"	"32982"	"32976"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.9"	""	"5.3"	""	"4.4"	""	"17.8"	""	"10.9"	"12.9"	""	"769"	"12"	"35.000"	"28.000"	"2.63570223071048"	"16"	"0.005119"	"0.05843"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DYFEEYGK"	"[R].dYFEEYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"754.88580"	"1508.76433"	"1508.76733"	"-1.99"	"-0.00150"	"6/64"	"6"	"64"	"358512.865112305"	"HCD"	"MS2"	"0"	"35.3"	"100.000"	"76.6572"	"26139"	"26139"	"26119"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.2"	""	"27.5"	""	"21.7"	""	"82.6"	"0.2"	"80.1"	"80.1"	""	"764"	"41"	"35.000"	"28.000"	"0.00285143425712645"	"16"	"0"	"0.002247"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DYFEQYGK"	"[R].dYFEqYGk.[I]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"0"	"1"	""	""	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"754.88580"	"1508.76433"	"1508.76733"	"-1.99"	"-0.00150"	"6/68"	"6"	"68"	"358512.865112305"	"HCD"	"MS2"	"0"	"35.3"	"100.000"	"76.6572"	"26139"	"26139"	"26119"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.2"	""	"27.5"	""	"21.7"	""	"82.6"	"0.2"	"80.1"	"80.1"	""	"764"	"41"	"35.000"	"28.000"	"0.00285143425712645"	"16"	"0"	"0.002247"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DYFEEYGK"	"[R].dYFEEYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"754.88599"	"1508.76470"	"1508.76733"	"-1.75"	"-0.00132"	"12/64"	"12"	"64"	"453916.201843262"	"HCD"	"MS2"	"7.635319"	"47.7"	"100.000"	"76.7645"	"26174"	"26174"	"26156"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.2"	""	"33.5"	""	"33.1"	""	"108.9"	""	"116.0"	"107.5"	""	"773"	"32"	"35.000"	"28.000"	"0.0227588072794935"	"18"	"0.0003538"	"0.006959"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DYFEQYGK"	"[R].dYFEqYGk.[I]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"0"	"1"	""	""	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"754.88599"	"1508.76470"	"1508.76733"	"-1.75"	"-0.00132"	"12/68"	"12"	"68"	"453916.201843262"	"HCD"	"MS2"	"7.635319"	"47.7"	"100.000"	"76.7645"	"26174"	"26174"	"26156"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.2"	""	"33.5"	""	"33.1"	""	"108.9"	""	"116.0"	"107.5"	""	"773"	"32"	"35.000"	"28.000"	"0.0227588072794935"	"18"	"0.0003538"	"0.00696"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DYFEEYGK"	"[R].dYFEEYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"754.88629"	"1508.76531"	"1508.76733"	"-1.34"	"-0.00101"	"5/64"	"5"	"64"	"169602.307312012"	"HCD"	"MS2"	"33.40268"	"15.8"	"100.000"	"77.2684"	"26388"	"26388"	"26364"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.9"	""	"9.6"	""	"11.3"	""	"32.7"	""	"44.5"	"34.0"	""	"772"	"25"	"35.000"	"28.000"	"0.121783178462261"	"16"	"0.001546"	"0.01854"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DYFEQYGK"	"[R].dYFEqYGk.[I]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"0"	"1"	""	""	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"754.88629"	"1508.76531"	"1508.76733"	"-1.34"	"-0.00101"	"5/68"	"5"	"68"	"169602.307312012"	"HCD"	"MS2"	"33.40268"	"15.8"	"100.000"	"77.2684"	"26388"	"26388"	"26364"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.9"	""	"9.6"	""	"11.3"	""	"32.7"	""	"44.5"	"34.0"	""	"772"	"25"	"35.000"	"28.000"	"0.121783178462261"	"16"	"0.001546"	"0.01854"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DYFEEYGK"	"[R].dYFEEYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"754.88647"	"1508.76567"	"1508.76733"	"-1.10"	"-0.00083"	"6/64"	"6"	"64"	"2140970.40338135"	"HCD"	"MS2"	"0"	"207.4"	"100.000"	"76.9432"	"26255"	"26255"	"26237"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"250.7"	""	"125.2"	""	"129.2"	""	"450.3"	"1.6"	"511.2"	"508.9"	""	"790"	"42"	"35.000"	"28.000"	"0.00228874335088618"	"18"	"0.0001301"	"0.004159"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DYFEQYGK"	"[R].dYFEqYGk.[I]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"0"	"1"	""	""	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"754.88647"	"1508.76567"	"1508.76733"	"-1.10"	"-0.00083"	"6/68"	"6"	"68"	"2140970.40338135"	"HCD"	"MS2"	"0"	"207.4"	"100.000"	"76.9432"	"26255"	"26255"	"26237"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"250.7"	""	"125.2"	""	"129.2"	""	"450.3"	"1.6"	"511.2"	"508.9"	""	"790"	"42"	"35.000"	"28.000"	"0.00228874335088618"	"18"	"0.0001301"	"0.00416"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DYFEEYGK"	"[R].dYFEEYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"754.88702"	"1508.76677"	"1508.76733"	"-0.37"	"-0.00028"	"6/64"	"6"	"64"	"1925730.10986328"	"HCD"	"MS2"	"0"	"196.8"	"100.000"	"77.0556"	"26292"	"26292"	"26279"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"232.7"	""	"136.2"	""	"121.5"	""	"437.5"	""	"482.7"	"467.2"	""	"799"	"40"	"36.000"	"29.000"	"0.00436030414411279"	"17"	"0.0001301"	"0.004807"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DYFEQYGK"	"[R].dYFEqYGk.[I]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"0"	"1"	""	""	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"754.88702"	"1508.76677"	"1508.76733"	"-0.37"	"-0.00028"	"6/68"	"6"	"68"	"1925730.10986328"	"HCD"	"MS2"	"0"	"196.8"	"100.000"	"77.0556"	"26292"	"26292"	"26279"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"232.7"	""	"136.2"	""	"121.5"	""	"437.5"	""	"482.7"	"467.2"	""	"799"	"40"	"36.000"	"29.000"	"0.00436030414411279"	"17"	"0.0001301"	"0.004808"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTYVVLDEADR"	"[R].vTYVVLDEADR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62780"	"Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus OX=10116 GN=Ddx46 PE=1 SV=1"	"Q62780"	"Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus OX=10116 GN=Ddx46 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"754.91144"	"1508.81560"	"1508.81579"	"-0.13"	"-0.00009"	"7/96"	"7"	"96"	"112208.959655762"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"80.9453"	"27864"	"27864"	"27838"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.5"	""	"4.2"	""	"8.4"	""	"10.6"	""	"14.1"	"10.5"	""	"993"	"22"	"36.000"	"29.000"	"0.30473283556432"	"16"	"0.001374"	"0.01692"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTYVVLDEADR"	"[R].vTYVVLDEADR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62780"	"Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus OX=10116 GN=Ddx46 PE=1 SV=1"	"Q62780"	"Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus OX=10116 GN=Ddx46 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"754.91223"	"1508.81719"	"1508.81579"	"0.93"	"0.00070"	"9/96"	"9"	"96"	"112095.556335449"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"81.0128"	"27892"	"27892"	"27867"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.7"	""	"10.5"	""	"8.6"	""	"14.9"	""	"15.1"	"13.0"	""	"998"	"19"	"36.000"	"29.000"	"0.590337736306857"	"19"	"0.005921"	"0.06837"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEHPGLSIGDVAK"	"[K].GEHPGLSIGDVAk.[K]"	"K13(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"503.61334"	"1508.82547"	"1508.82702"	"-1.03"	"-0.00052"	"14/112"	"14"	"112"	"1545264.65496826"	"HCD"	"MS2"	"49.615"	"52.6"	"100.000"	"51.5916"	"15975"	"15975"	"15947"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"73.4"	""	"99.3"	""	"58.5"	""	"72.5"	"0.5"	"75.0"	"119.3"	""	"1032"	"27"	"37.000"	"30.000"	"0.094983835275798"	"23"	"0.0007829"	"0.009383"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEHPGLSIGDVAK"	"[K].GEHPGLSIGDVAk.[K]"	"K13(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"503.61398"	"1508.82740"	"1508.82702"	"0.25"	"0.00012"	"13/112"	"13"	"112"	"1467127.97735596"	"HCD"	"MS2"	"39.80198"	"53.8"	"100.000"	"51.6239"	"15988"	"15988"	"15963"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"69.5"	""	"115.1"	""	"51.4"	""	"79.2"	""	"77.4"	"117.0"	""	"1012"	"28"	"37.000"	"30.000"	"0.0757095241983783"	"19"	"0.0001301"	"0.00393"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGPESDKYR"	"[R].vGPESDkYR.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"503.62003"	"1508.84552"	"1508.84731"	"-1.19"	"-0.00060"	"8/72"	"8"	"72"	"10700400.2797852"	"HCD"	"MS2"	"27.85194"	"431.6"	"82.904"	"34.0922"	"8872"	"8872"	"8855"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"614.7"	""	"515.4"	""	"418.2"	""	"894.1"	""	"895.0"	"760.7"	""	"944"	"2"	"36.000"	"29.000"	"29.1703740865332"	"13"	"0.001465"	"0.01845"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNADTDGMVK"	"[K].tNADTDGMVk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"755.40118"	"1509.79509"	"1509.79831"	"-2.13"	"-0.00161"	"15/98"	"15"	"98"	"1125196.56634521"	"HCD"	"MS2"	"0"	"110.5"	"100.000"	"43.6954"	"12765"	"12765"	"12750"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"219.8"	""	"134.8"	""	"116.9"	""	"130.2"	""	"210.0"	"238.3"	""	"967"	"53"	"36.000"	"29.000"	"0.000244566224078506"	"23"	"0"	"3.604E-05"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNADTDGMVK"	"[K].tNADTDGMVk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"755.40179"	"1509.79631"	"1509.79831"	"-1.33"	"-0.00100"	"8/98"	"8"	"98"	"976317.229614258"	"HCD"	"MS2"	"0"	"95.9"	"100.000"	"43.6075"	"12739"	"12739"	"12720"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"189.3"	""	"109.2"	""	"113.9"	""	"112.5"	""	"179.9"	"204.7"	""	"974"	"54"	"36.000"	"29.000"	"0.000204893868023225"	"25"	"0"	"4.299E-05"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYEIGGGTSEVR"	"[K].lYEIGGGTSEVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"755.40771"	"1509.80815"	"1509.81104"	"-1.91"	"-0.00144"	"10/102"	"10"	"102"	"870194.710144043"	"HCD"	"MS2"	"4.874009"	"51.0"	"100.000"	"66.6170"	"22064"	"22064"	"22045"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.6"	""	"82.6"	""	"73.6"	""	"76.8"	""	"89.9"	"90.9"	""	"1024"	"66"	"37.000"	"30.000"	"1.39723662479772E-05"	"23"	"0"	"1.01E-06"	"1.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYEIGGGTSEVR"	"[K].lYEIGGGTSEVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.8730"	"0.0000"	"1"	"1"	"1"	"755.40796"	"1509.80864"	"1509.81104"	"-1.59"	"-0.00120"	"9/102"	"9"	"102"	"728296.877929688"	"HCD"	"MS2"	"5.303773"	"43.8"	"100.000"	"66.7106"	"22087"	"22087"	"22068"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.6"	""	"67.2"	""	"70.0"	""	"67.7"	"0.1"	"76.6"	"80.6"	""	"1019"	"63"	"37.000"	"30.000"	"2.73617700250644E-05"	"24"	"0"	"2.227E-06"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFEGEITK"	"[R].nNFEGEITk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"755.41711"	"1509.82695"	"1509.83133"	"-2.90"	"-0.00219"	"7/88"	"7"	"88"	"3259152.06494141"	"HCD"	"MS2"	"23.9202"	"277.0"	"100.000"	"59.2927"	"19111"	"19111"	"19096"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"420.5"	""	"331.9"	""	"371.6"	""	"461.5"	""	"520.0"	"519.9"	""	"949"	"37"	"36.000"	"29.000"	"0.0087143744391879"	"28"	"0"	"0.001217"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFEGEITK"	"[R].nNFEGEITk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.4595"	"0.0000"	"1"	"1"	"1"	"755.41766"	"1509.82805"	"1509.83133"	"-2.17"	"-0.00164"	"7/88"	"7"	"88"	"3730576.42572021"	"HCD"	"MS2"	"18.6807"	"302.0"	"100.000"	"59.0810"	"19039"	"19039"	"19021"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"449.6"	""	"390.8"	""	"418.0"	""	"488.7"	"0.0"	"548.7"	"565.2"	""	"951"	"37"	"36.000"	"29.000"	"0.00984352211350139"	""	"0"	"0.001693"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFEGEITK"	"[R].nNFEGEITk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"755.41809"	"1509.82891"	"1509.83133"	"-1.61"	"-0.00121"	"14/88"	"14"	"88"	"547103.603027344"	"HCD"	"MS2"	"25.65956"	"53.8"	"100.000"	"59.3898"	"19165"	"19165"	"19142"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.5"	""	"58.7"	""	"74.3"	""	"81.1"	""	"111.0"	"107.9"	""	"947"	"19"	"36.000"	"29.000"	"0.586570183722129"	"22"	"0.001211"	"0.01492"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFEGEITK"	"[R].nNFEGEITk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"755.41821"	"1509.82915"	"1509.83133"	"-1.44"	"-0.00109"	"6/88"	"6"	"88"	"514311.186462402"	"HCD"	"MS2"	"19.99889"	"52.4"	"100.000"	"59.6333"	"19250"	"19250"	"19222"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"79.7"	""	"65.7"	""	"66.6"	""	"80.2"	""	"100.2"	"108.1"	""	"946"	"23"	"36.000"	"29.000"	"0.252267405565645"	"26"	"0.0002479"	"0.005863"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFEGEITK"	"[R].nNFEGEITk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"503.94858"	"1509.83118"	"1509.83133"	"-0.10"	"-0.00005"	"9/88"	"9"	"88"	"4544322.58685303"	"HCD"	"MS2"	"53.83104"	"135.9"	"100.000"	"59.2994"	"19113"	"19113"	"19096"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"197.2"	""	"165.4"	""	"176.6"	""	"234.9"	"2.3"	"257.8"	"253.6"	""	"925"	"26"	"36.000"	"29.000"	"0.106687057478303"	"23"	"0.0003538"	"0.006122"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFEGEITK"	"[R].nNFEGEITk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.6591"	"0.0000"	"1"	"1"	"1"	"503.94879"	"1509.83182"	"1509.83133"	"0.33"	"0.00016"	"7/88"	"7"	"88"	"4904305.89068604"	"HCD"	"MS2"	"55.82209"	"145.6"	"100.000"	"59.0860"	"19041"	"19041"	"19021"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"214.1"	"2.6"	"184.3"	""	"191.0"	""	"236.9"	"0.5"	"278.7"	"272.0"	""	"914"	"44"	"36.000"	"29.000"	"0.00167076819767198"	""	"0"	"0.001014"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFEGEITK"	"[R].nNFEGEITk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.4545"	"0.0000"	"1"	"1"	"1"	"503.95667"	"1509.85544"	"1509.83133"	"15.97"	"0.00804"	"7/88"	"7"	"88"	"4333612.27783203"	"HCD"	"MS2"	"39.07962"	"121.9"	"100.000"	"59.0442"	"19024"	"19024"	"19005"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"175.7"	""	"153.4"	""	"158.8"	""	"195.9"	"0.2"	"237.6"	"234.2"	""	"796"	"22"	"35.000"	"29.000"	"0.246537547880559"	"26"	"0.001546"	"0.01924"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNTAGIDIFSK"	"[R].ESNTAGIDIFSk.[F]"	"K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"755.89941"	"1510.79155"	"1510.79505"	"-2.32"	"-0.00175"	"6/126"	"6"	"126"	"153962.873291016"	"HCD"	"MS2"	"46.38835"	"9.4"	"100.000"	"81.8470"	"28228"	"28228"	"28204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.7"	""	"13.2"	""	"13.9"	""	"11.7"	""	"19.4"	"21.6"	""	"936"	"36"	"36.000"	"29.000"	"0.0115145203874109"	"28"	"0.001374"	"0.0175"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNTAGIDIFSK"	"[R].ESNTAGIDIFSk.[F]"	"K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"0.7045"	"0.0000"	"1"	"1"	"1"	"755.90076"	"1510.79424"	"1510.79505"	"-0.54"	"-0.00041"	"6/126"	"6"	"126"	"127769.394836426"	"HCD"	"MS2"	"25.62495"	"7.5"	"100.000"	"81.7771"	"28197"	"28197"	"28178"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.7"	""	"11.1"	""	"9.0"	""	"9.7"	""	"18.0"	"15.6"	""	"925"	"44"	"36.000"	"29.000"	"0.00191034469670449"	"28"	"0.0001301"	"0.004014"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNTAGIDIFSK"	"[R].ESNTAGIDIFSk.[F]"	"K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"0.5510"	"0.0000"	"1"	"1"	"1"	"755.90088"	"1510.79448"	"1510.79505"	"-0.38"	"-0.00029"	"7/126"	"7"	"126"	"128852.840698242"	"HCD"	"MS2"	"13.40585"	"8.2"	"100.000"	"82.0793"	"28318"	"28318"	"28298"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.8"	""	"12.7"	""	"11.0"	""	"13.5"	""	"14.3"	"17.1"	""	"925"	"49"	"36.000"	"29.000"	"0.000647309136689836"	""	"0.0002479"	"0.005481"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNTAGIDIFSK"	"[R].ESNTAGIDIFSk.[F]"	"K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"0.6731"	"0.0000"	"1"	"1"	"1"	"755.90088"	"1510.79448"	"1510.79505"	"-0.38"	"-0.00029"	"7/126"	"7"	"126"	"128528.448181152"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"82.1424"	"28346"	"28346"	"28330"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.3"	""	"8.1"	""	"9.6"	""	"8.7"	""	"12.6"	"10.6"	""	"925"	"52"	"36.000"	"29.000"	"0.000314131680085448"	""	"0"	"0.002262"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGNTLEDK"	"[K].eFGNTLEDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"755.91077"	"1510.81426"	"1510.81534"	"-0.72"	"-0.00054"	"8/88"	"8"	"88"	"980734.390991211"	"HCD"	"MS2"	"0"	"90.3"	"100.000"	"64.0717"	"21018"	"21018"	"20999"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"126.4"	""	"98.6"	""	"105.3"	""	"165.7"	""	"159.0"	"202.3"	""	"911"	"46"	"36.000"	"29.000"	"0.00113628789812252"	"25"	"0"	"0.000277"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGNTLEDK"	"[K].eFGNTLEDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"0"	"2"	"2"	"0.8431"	"0.0000"	"1"	"1"	"1"	"755.91101"	"1510.81474"	"1510.81534"	"-0.40"	"-0.00030"	"8/88"	"8"	"88"	"1222844.19830322"	"HCD"	"MS2"	"0"	"106.9"	"100.000"	"63.9111"	"20967"	"20967"	"20948"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"168.2"	""	"109.4"	""	"128.5"	""	"210.6"	"1.6"	"163.7"	"229.8"	""	"908"	"51"	"36.000"	"29.000"	"0.000363961840778007"	"24"	"0"	"0.0003208"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGNTLEDK"	"[K].eFGNTLEDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"504.27649"	"1510.81491"	"1510.81534"	"-0.28"	"-0.00014"	"8/88"	"8"	"88"	"969294.161010742"	"HCD"	"MS2"	"38.48813"	"32.2"	"100.000"	"63.9819"	"20982"	"20982"	"20951"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.3"	""	"43.9"	""	"38.5"	""	"61.2"	""	"54.2"	"64.8"	""	"907"	"23"	"36.000"	"29.000"	"0.247501190004891"	"16"	"0.007872"	"0.09639"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGNTLEDK"	"[K].eFGNTLEDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"755.91223"	"1510.81719"	"1510.81534"	"1.22"	"0.00092"	"8/88"	"8"	"88"	"1004862.55529785"	"HCD"	"MS2"	"23.96027"	"88.9"	"100.000"	"63.7606"	"20891"	"20891"	"20875"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"154.7"	""	"97.8"	""	"97.0"	""	"173.3"	"0.2"	"140.7"	"178.2"	""	"890"	"53"	"36.000"	"29.000"	"0.000218454004887908"	"24"	"0"	"0.0002496"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGNTLEDK"	"[K].eFGNTLEDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"755.91345"	"1510.81963"	"1510.81534"	"2.84"	"0.00214"	"7/88"	"7"	"88"	"899555.883789063"	"HCD"	"MS2"	"52.5435"	"78.7"	"100.000"	"63.6139"	"20846"	"20846"	"20827"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"124.4"	""	"99.4"	""	"94.4"	""	"143.4"	""	"120.5"	"165.2"	""	"889"	"52"	"36.000"	"29.000"	"0.000288982647357504"	"22"	"0"	"0.0002737"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDFGNQSPSTSR"	"[K].sDFGNQSPSTSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQX1"	"Torsin-1A-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Tor1aip1 PE=1 SV=1"	"Q5PQX1"	"Torsin-1A-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Tor1aip1 PE=1 SV=1"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"756.36823"	"1511.72917"	"1511.72877"	"0.27"	"0.00020"	"7/122"	"7"	"122"	"332608.289245605"	"HCD"	"MS2"	"0"	"21.5"	"100.000"	"30.1664"	"7273"	"7273"	"7248"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.6"	""	"23.3"	""	"20.8"	""	"45.2"	""	"46.4"	"51.9"	""	"507"	"46"	"34.000"	"27.000"	"0.000635298695643641"	"19"	"0"	"0.000104"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDFGNQSPSTSR"	"[K].sDFGNQSPSTSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQX1"	"Torsin-1A-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Tor1aip1 PE=1 SV=1"	"Q5PQX1"	"Torsin-1A-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Tor1aip1 PE=1 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"756.36847"	"1511.72966"	"1511.72877"	"0.59"	"0.00045"	"8/122"	"8"	"122"	"359310.179016113"	"HCD"	"MS2"	"0"	"24.3"	"100.000"	"30.1592"	"7282"	"7282"	"7257"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.9"	""	"20.4"	""	"21.8"	""	"50.5"	""	"60.1"	"60.8"	""	"516"	"35"	"34.000"	"27.000"	"0.00915418544222624"	"18"	"0"	"0.0003003"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGTDLMNEMR"	"[K].sLGTDLMNEmR.[R]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"756.37238"	"1511.73747"	"1511.73953"	"-1.36"	"-0.00103"	"6/102"	"6"	"102"	"370032.773620605"	"HCD"	"MS2"	"38.6876"	"31.9"	"100.000"	"64.1670"	"21071"	"21071"	"21049"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.9"	""	"42.5"	"2.0"	"35.1"	""	"56.7"	"0.4"	"62.2"	"64.1"	""	"562"	"14"	"34.000"	"27.000"	"1.22660948859487"	"20"	"0.007279"	"0.08356"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGTDLMNEMR"	"[K].sLGTDLmNEMR.[R]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"756.37305"	"1511.73882"	"1511.73953"	"-0.47"	"-0.00036"	"8/102"	"8"	"102"	"472046.598449707"	"HCD"	"MS2"	"15.05338"	"31.2"	"100.000"	"66.8175"	"22146"	"22146"	"22125"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.5"	""	"34.9"	""	"37.1"	""	"57.9"	"1.4"	"62.0"	"63.4"	""	"558"	"46"	"34.000"	"27.000"	"0.000722111403327712"	"23"	"0"	"0.00125"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGTDLMNEMR"	"[K].sLGTDLMNEmR.[R]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"756.37305"	"1511.73882"	"1511.73953"	"-0.47"	"-0.00036"	"6/102"	"6"	"102"	"484243.846496582"	"HCD"	"MS2"	"41.79468"	"40.4"	"100.000"	"64.2514"	"21091"	"21091"	"21070"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.3"	""	"51.3"	""	"46.9"	""	"71.3"	""	"78.1"	"88.2"	""	"558"	"27"	"34.000"	"27.000"	"0.05775694363127"	"20"	"0"	"0.0007637"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGTDLMNEMR"	"[K].sLGTDLmNEMR.[R]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"756.37354"	"1511.73979"	"1511.73953"	"0.17"	"0.00013"	"9/102"	"9"	"102"	"408362.087280273"	"HCD"	"MS2"	"10.61651"	"26.3"	"100.000"	"66.9088"	"22168"	"22168"	"22148"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.5"	""	"31.7"	""	"31.9"	""	"43.8"	""	"55.2"	"56.4"	""	"584"	"47"	"34.000"	"27.000"	"0.000561542784841767"	"23"	"0"	"0.001036"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GACAGSEDAVK"	"[R].gAcAGSEDAVk.[A]"	"N-Term(TMT6plex); C3(Methylthio); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"756.38330"	"1511.75932"	"1511.75982"	"-0.33"	"-0.00025"	"10/84"	"10"	"84"	"369099.176269531"	"HCD"	"MS2"	"20.22217"	"34.5"	"100.000"	"48.3928"	"14683"	"14683"	"14658"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.7"	"1.8"	"45.9"	""	"41.7"	""	"46.5"	"0.2"	"73.3"	"76.1"	""	"703"	"56"	"35.000"	"28.000"	"8.78871394636295E-05"	"28"	"0"	"3.246E-05"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELASYDMQLR"	"[K].gELASYDMQLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"756.38892"	"1511.77056"	"1511.77254"	"-1.32"	"-0.00099"	"10/94"	"10"	"94"	"200605.578674316"	"HCD"	"MS2"	"0"	"13.4"	"100.000"	"74.3838"	"25227"	"25227"	"25201"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.3"	""	"16.7"	""	"16.6"	""	"17.1"	""	"26.9"	"27.5"	""	"814"	"25"	"36.000"	"29.000"	"0.122065914522797"	"16"	"0.002711"	"0.0259"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELASYDMQLR"	"[K].gELASYDMQLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"756.38916"	"1511.77104"	"1511.77254"	"-0.99"	"-0.00075"	"8/94"	"8"	"94"	"190049.588745117"	"HCD"	"MS2"	"20.10062"	"12.4"	"100.000"	"74.5326"	"25274"	"25274"	"25248"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.3"	""	"19.5"	""	"15.0"	""	"14.9"	""	"24.0"	"24.4"	""	"820"	"34"	"36.000"	"29.000"	"0.0177739460138887"	"15"	"0.0003538"	"0.007368"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELASYDMQLR"	"[K].gELASYDMQLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"756.39063"	"1511.77397"	"1511.77254"	"0.95"	"0.00071"	"10/94"	"10"	"94"	"219670.879821777"	"HCD"	"MS2"	"15.13331"	"11.7"	"100.000"	"74.8231"	"25391"	"25391"	"25374"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.9"	""	"15.5"	""	"16.4"	""	"16.1"	""	"21.1"	"23.4"	""	"829"	"15"	"36.000"	"29.000"	"1.28388029952527"	"13"	"0.007808"	"0.09537"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELASYDMQLR"	"[K].gELASYDMQLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"756.39105"	"1511.77483"	"1511.77254"	"1.51"	"0.00114"	"11/94"	"11"	"94"	"187848.085754395"	"HCD"	"MS2"	"19.85851"	"11.9"	"100.000"	"74.6930"	"25351"	"25351"	"25335"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.9"	""	"12.0"	""	"19.3"	""	"17.5"	""	"20.3"	"24.1"	""	"825"	"12"	"36.000"	"29.000"	"2.6086988869269"	"13"	"0.0008629"	"0.01065"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYEQDEEK"	"[K].iYEQDEEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"756.40137"	"1511.79546"	"1511.79936"	"-2.58"	"-0.00195"	"7/72"	"7"	"72"	"503228.407653809"	"HCD"	"MS2"	"0"	"46.6"	"100.000"	"46.9436"	"14080"	"14080"	"14057"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"85.5"	""	"40.3"	""	"59.8"	""	"69.2"	""	"94.5"	"96.4"	""	"861"	"39"	"36.000"	"29.000"	"0.00587453040301533"	""	"0.0001301"	"0.003874"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYEQDEEK"	"[K].iYEQDEEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"756.40265"	"1511.79802"	"1511.79936"	"-0.89"	"-0.00067"	"11/72"	"11"	"72"	"387737.17565918"	"HCD"	"MS2"	"0"	"36.5"	"100.000"	"46.6453"	"13970"	"13970"	"13949"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.0"	""	"33.1"	""	"41.1"	""	"70.6"	""	"77.7"	"59.7"	""	"877"	"26"	"36.000"	"29.000"	"0.118023801152195"	"25"	"0.006769"	"0.07791"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDNDTFTVK"	"[K].nDNDTFTVk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"504.60803"	"1511.80954"	"1511.81059"	"-0.69"	"-0.00035"	"9/90"	"9"	"90"	"3719285.14294434"	"HCD"	"MS2"	"14.04446"	"119.3"	"100.000"	"53.6645"	"16832"	"16832"	"16812"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"190.5"	""	"142.4"	""	"159.8"	""	"186.8"	""	"240.7"	"218.7"	""	"866"	"39"	"36.000"	"29.000"	"0.00590864498143005"	"20"	"0"	"0.002046"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDNDTFTVK"	"[K].nDNDTFTVk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"504.60803"	"1511.80954"	"1511.81059"	"-0.69"	"-0.00035"	"9/90"	"9"	"90"	"3690502.63269043"	"HCD"	"MS2"	"18.71303"	"123.0"	"100.000"	"53.8924"	"16914"	"16914"	"16896"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"193.4"	"3.8"	"160.6"	""	"179.5"	""	"195.0"	""	"225.9"	"206.8"	""	"866"	"38"	"36.000"	"29.000"	"0.00631666574699226"	"21"	"0"	"0.002944"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDNDTFTVK"	"[K].nDNDTFTVk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.9153"	"0.0000"	"1"	"1"	"1"	"756.40863"	"1511.80998"	"1511.81059"	"-0.40"	"-0.00030"	"8/90"	"8"	"90"	"4069831.71282959"	"HCD"	"MS2"	"0"	"366.5"	"100.000"	"54.0097"	"16962"	"16962"	"16944"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"585.4"	""	"426.8"	""	"498.0"	""	"540.4"	""	"689.4"	"734.4"	""	"868"	"59"	"36.000"	"29.000"	"5.33936646532574E-05"	"21"	"0"	"0.0002283"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDNDTFTVK"	"[K].nDNDTFTVk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"756.40875"	"1511.81023"	"1511.81059"	"-0.24"	"-0.00018"	"8/90"	"8"	"90"	"3594924.69995117"	"HCD"	"MS2"	"0"	"316.7"	"100.000"	"53.7768"	"16878"	"16878"	"16860"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"508.0"	""	"356.3"	""	"427.7"	""	"486.6"	""	"614.9"	"610.2"	""	"867"	"54"	"36.000"	"29.000"	"0.000158120835992251"	"25"	"0"	"0.0003263"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDNDTFTVK"	"[K].nDNDTFTVk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"756.40900"	"1511.81072"	"1511.81059"	"0.08"	"0.00006"	"6/90"	"6"	"90"	"183224.681030273"	"HCD"	"MS2"	"0"	"20.5"	"100.000"	"54.1059"	"17013"	"17013"	"16987"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.1"	""	"28.3"	""	"27.6"	""	"34.4"	"2.2"	"38.5"	"39.8"	""	"860"	"18"	"36.000"	"29.000"	"0.634553809308635"	"21"	"0.008522"	"0.1062"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDNDTFTVK"	"[K].nDNDTFTVk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.8393"	"0.0000"	"1"	"1"	"1"	"756.40942"	"1511.81157"	"1511.81059"	"0.65"	"0.00049"	"8/90"	"8"	"90"	"1095643.69274902"	"HCD"	"MS2"	"0"	"111.5"	"100.000"	"53.4822"	"16758"	"16758"	"16732"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"181.9"	""	"140.9"	"2.4"	"152.5"	""	"170.8"	""	"208.8"	"200.2"	""	"849"	"56"	"36.000"	"29.000"	"0.000101129461474276"	"26"	"0"	"0.0002356"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDNDTFTVK"	"[K].nDNDTFTVk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.9057"	"0.0000"	"1"	"1"	"1"	"756.41138"	"1511.81548"	"1511.81059"	"3.23"	"0.00244"	"14/90"	"14"	"90"	"705889.957885742"	"HCD"	"MS2"	"0"	"76.6"	"100.000"	"53.7198"	"16844"	"16844"	"16817"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"123.3"	""	"100.5"	""	"109.2"	""	"118.3"	"0.7"	"134.2"	"139.0"	""	"882"	"53"	"36.000"	"29.000"	"0.000232508368887465"	"21"	"0"	"0.0003442"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVETEDAYK"	"[K].vVETEDAYk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"3"	"3"	"0.6774"	"0.0000"	"1"	"1"	"1"	"504.61609"	"1511.83371"	"1511.83575"	"-1.34"	"-0.00068"	"7/70"	"7"	"70"	"1387152.43536377"	"HCD"	"MS2"	"24.03688"	"49.7"	"100.000"	"54.9959"	"17372"	"17372"	"17352"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.0"	""	"65.8"	""	"62.5"	""	"79.4"	"0.9"	"109.9"	"87.2"	""	"817"	"31"	"36.000"	"29.000"	"0.0338214373876489"	"25"	"0.000936"	"0.01252"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVETEDAYK"	"[K].vVETEDAYk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"756.42084"	"1511.83440"	"1511.83575"	"-0.89"	"-0.00067"	"8/70"	"8"	"70"	"777034.454589844"	"HCD"	"MS2"	"19.0423"	"69.0"	"100.000"	"55.1267"	"17412"	"17412"	"17386"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.8"	""	"83.7"	""	"79.8"	""	"114.1"	"0.0"	"145.2"	"144.9"	""	"821"	"52"	"36.000"	"29.000"	"0.000247350710083524"	"26"	"0"	"0.0001027"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVETEDAYK"	"[K].vVETEDAYk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"504.61639"	"1511.83463"	"1511.83575"	"-0.74"	"-0.00037"	"8/70"	"8"	"70"	"1651605.69171143"	"HCD"	"MS2"	"18.26464"	"50.7"	"100.000"	"55.3174"	"17490"	"17490"	"17463"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"71.1"	""	"61.4"	""	"67.8"	""	"81.5"	""	"99.6"	"100.0"	""	"821"	"9"	"36.000"	"29.000"	"4.94667253522623"	"14"	"0.008522"	"0.1057"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVETEDAYK"	"[K].vVETEDAYk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"756.42175"	"1511.83623"	"1511.83575"	"0.32"	"0.00024"	"11/70"	"11"	"70"	"414458.026000977"	"HCD"	"MS2"	"100"	"45.5"	"100.000"	"54.8326"	"17306"	"17306"	"17284"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.4"	""	"59.7"	""	"56.5"	""	"66.7"	""	"98.3"	"83.8"	""	"832"	"19"	"36.000"	"29.000"	"0.540870544461849"	"17"	"0"	"0.002417"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVEESVTGVHR"	"[R].gIVEESVTGVHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"0"	"3"	"3"	"0.8955"	"0.0000"	"1"	"1"	"1"	"504.61700"	"1511.83646"	"1511.83792"	"-0.97"	"-0.00049"	"14/96"	"14"	"96"	"4798508.61755371"	"HCD"	"MS2"	"53.81208"	"54.1"	"100.000"	"45.1301"	"13342"	"13342"	"13323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.2"	""	"71.0"	""	"75.1"	""	"95.8"	"3.0"	"105.2"	"97.0"	""	"833"	"67"	"36.000"	"29.000"	"8.50383853954858E-06"	"24"	"0"	"7.617E-07"	"1.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVEESVTGVHR"	"[R].gIVEESVTGVHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"0"	"3"	"3"	"0.9123"	"0.0000"	"1"	"1"	"1"	"504.61728"	"1511.83728"	"1511.83792"	"-0.42"	"-0.00021"	"15/96"	"15"	"96"	"5089435.73907471"	"HCD"	"MS2"	"12.26541"	"53.6"	"100.000"	"44.9851"	"13294"	"13294"	"13273"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.4"	""	"75.3"	""	"70.9"	""	"93.8"	"1.5"	"101.0"	"99.1"	""	"837"	"57"	"36.000"	"29.000"	"8.12260739772578E-05"	"21"	"0"	"4.287E-06"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVMIDEDMTAR"	"[R].sVMIDEDmTAR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"756.86456"	"1512.72185"	"1512.72355"	"-1.12"	"-0.00085"	"13/96"	"13"	"96"	"233954.584838867"	"HCD"	"MS2"	"54.82391"	"16.2"	"100.000"	"47.6728"	"14378"	"14378"	"14353"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.1"	""	"25.4"	""	"24.5"	""	"22.2"	""	"32.1"	"33.4"	""	"428"	"31"	"33.000"	"26.000"	"0.0176772121209517"	"14"	"0"	"0.0005719"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVMIDEDMTAR"	"[R].sVMIDEDmTAR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"756.86481"	"1512.72234"	"1512.72355"	"-0.80"	"-0.00060"	"10/96"	"10"	"96"	"307709.942993164"	"HCD"	"MS2"	"30.02023"	"18.0"	"100.000"	"47.4090"	"14282"	"14282"	"14254"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.2"	""	"27.8"	""	"29.2"	""	"21.7"	""	"36.6"	"31.0"	""	"430"	"41"	"33.000"	"26.000"	"0.00189425507696723"	"15"	"0"	"0.0003377"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVMIDEDMTAR"	"[R].sVmIDEDMTAR.[I]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"756.86542"	"1512.72356"	"1512.72355"	"0.01"	"0.00001"	"16/96"	"16"	"96"	"521200.802062988"	"HCD"	"MS2"	"45.96887"	"32.2"	"100.000"	"56.6350"	"18027"	"18027"	"18004"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.1"	""	"41.3"	""	"54.4"	"1.9"	"37.1"	"0.8"	"55.6"	"60.4"	""	"436"	"30"	"33.000"	"26.000"	"0.0232517954428196"	"14"	"0.0008629"	"0.01015"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVMIDEDMTAR"	"[R].sVmIDEDMTAR.[I]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"756.86572"	"1512.72417"	"1512.72355"	"0.41"	"0.00031"	"14/96"	"14"	"96"	"546523.851806641"	"HCD"	"MS2"	"46.26072"	"34.2"	"100.000"	"56.4532"	"17967"	"17967"	"17942"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.3"	""	"58.0"	""	"53.5"	""	"41.9"	""	"59.3"	"58.9"	""	"447"	"26"	"33.000"	"26.000"	"0.0536139157400856"	"14"	"0.000936"	"0.01291"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFTQPEASYGR"	"[K].qFTQPEASYGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"756.88525"	"1512.76323"	"1512.76442"	"-0.79"	"-0.00060"	"9/110"	"9"	"110"	"476446.772216797"	"HCD"	"MS2"	"0"	"31.1"	"100.000"	"47.0846"	"14149"	"14149"	"14126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.6"	""	"25.8"	""	"32.4"	""	"67.2"	""	"71.5"	"63.0"	""	"701"	"34"	"35.000"	"28.000"	"0.0149516121339958"	"21"	"0"	"0.002111"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFTQPEASYGR"	"[K].qFTQPEASYGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"756.88702"	"1512.76677"	"1512.76442"	"1.55"	"0.00117"	"7/110"	"7"	"110"	"436914.623474121"	"HCD"	"MS2"	"0"	"27.5"	"100.000"	"47.3691"	"14254"	"14254"	"14225"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.3"	""	"19.7"	""	"26.2"	""	"56.9"	"0.5"	"66.7"	"51.3"	""	"736"	"39"	"35.000"	"28.000"	"0.00455877143843176"	"21"	"0.0006732"	"0.008718"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDENAYSK"	"[K].dIDENAYSk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9808"	"0.0000"	"1"	"1"	"1"	"756.90082"	"1512.79436"	"1512.79461"	"-0.17"	"-0.00012"	"8/86"	"8"	"86"	"517955.340881348"	"HCD"	"MS2"	"0"	"48.8"	"100.000"	"51.1970"	"15825"	"15825"	"15799"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"99.2"	""	"49.6"	""	"58.2"	""	"78.0"	""	"97.1"	"83.2"	""	"791"	"52"	"35.000"	"28.000"	"0.00022446389143908"	"17"	"0"	"7.906E-05"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDENAYSK"	"[K].dIDENAYSk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"756.90112"	"1512.79497"	"1512.79461"	"0.24"	"0.00018"	"13/86"	"13"	"86"	"514819.649841309"	"HCD"	"MS2"	"13.50491"	"49.9"	"100.000"	"51.5524"	"15959"	"15959"	"15931"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"88.1"	""	"56.3"	""	"63.9"	""	"81.5"	""	"97.5"	"89.0"	""	"786"	"41"	"35.000"	"28.000"	"0.00310736700803931"	"17"	"0"	"0.0003091"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APVPGAQNSSEAR"	"[K].aPVPGAQNSSEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT0"	"Stomatin-like protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Stoml2 PE=1 SV=1"	"Q4FZT0"	"Stomatin-like protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Stoml2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"756.90186"	"1512.79643"	"1512.79679"	"-0.23"	"-0.00018"	"9/112"	"9"	"112"	"186330.634887695"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"30.0380"	"7221"	"7221"	"7197"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.2"	""	"8.9"	""	"13.9"	""	"20.8"	""	"21.2"	"26.7"	""	"789"	"16"	"35.000"	"28.000"	"0.912109559724271"	"14"	"0.0008629"	"0.009878"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVSSLTEEISR"	"[R].yVSSLTEEISR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"756.90796"	"1512.80864"	"1512.81070"	"-1.36"	"-0.00103"	"8/94"	"8"	"94"	"288356.652709961"	"HCD"	"MS2"	"30.56616"	"17.7"	"100.000"	"78.5011"	"26881"	"26881"	"26863"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.7"	""	"14.6"	""	"19.7"	""	"33.1"	"0.6"	"37.2"	"44.6"	""	"820"	"51"	"36.000"	"29.000"	"0.000348966595662974"	"22"	"0"	"5.244E-05"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVSSLTEEISR"	"[R].yVSSLTEEISR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"756.90912"	"1512.81096"	"1512.81070"	"0.17"	"0.00013"	"7/94"	"7"	"94"	"312126.703491211"	"HCD"	"MS2"	"20.66196"	"16.9"	"100.000"	"78.5383"	"26891"	"26891"	"26868"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.3"	""	"22.0"	""	"18.6"	""	"33.0"	""	"34.9"	"37.9"	""	"801"	"54"	"36.000"	"29.000"	"0.000176442222834374"	"22"	"0"	"1.818E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVSSLTEEISR"	"[R].yVSSLTEEISR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"756.90955"	"1512.81182"	"1512.81070"	"0.73"	"0.00056"	"8/94"	"8"	"94"	"194763.208679199"	"HCD"	"MS2"	"9.579616"	"11.0"	"100.000"	"78.7988"	"27000"	"27000"	"26989"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.5"	""	"12.9"	""	"10.1"	""	"24.3"	""	"23.1"	"22.8"	""	"808"	"42"	"36.000"	"29.000"	"0.00271257256582085"	"20"	"0"	"0.0003317"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVSSLTEEISR"	"[R].yVSSLTEEISR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"756.91016"	"1512.81304"	"1512.81070"	"1.54"	"0.00117"	"7/94"	"7"	"94"	"115049.217346191"	"HCD"	"MS2"	"10.85192"	"7.9"	"100.000"	"78.8611"	"27021"	"27021"	"27001"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.8"	""	"9.3"	""	"7.3"	""	"14.3"	""	"16.6"	"18.1"	""	"807"	"14"	"36.000"	"29.000"	"1.78173675507062"	"13"	"0.007147"	"0.08257"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGGLPQEPTSR"	"[K].lEGGLPQEPTSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"756.91089"	"1512.81450"	"1512.82194"	"-4.92"	"-0.00372"	"8/116"	"8"	"116"	"1897446.93591309"	"HCD"	"MS2"	"20.11809"	"64.8"	"100.000"	"57.1255"	"18227"	"18227"	"18208"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"79.6"	""	"79.1"	""	"66.6"	""	"125.0"	"0.9"	"141.6"	"122.8"	""	"806"	"23"	"36.000"	"29.000"	"0.181261281521995"	"26"	"0"	"0.0007027"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGGLPQEPTSR"	"[K].lEGGLPQEPTSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"756.91309"	"1512.81890"	"1512.82194"	"-2.01"	"-0.00152"	"7/116"	"7"	"116"	"1875491.06201172"	"HCD"	"MS2"	"17.24696"	"67.6"	"100.000"	"56.9806"	"18182"	"18182"	"18163"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"83.5"	""	"64.5"	""	"79.4"	""	"134.0"	"0.6"	"145.5"	"134.9"	""	"821"	"29"	"36.000"	"29.000"	"0.0560161377569753"	""	"0"	"0.00035"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPGLTDTTVPR"	"[K].dIPGLTDTTVPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"757.42365"	"1513.84001"	"1513.84234"	"-1.54"	"-0.00116"	"11/104"	"11"	"104"	"249975.560852051"	"HCD"	"MS2"	"0"	"12.3"	"100.000"	"79.9292"	"27455"	"27455"	"27435"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.3"	""	"18.1"	""	"19.6"	""	"16.8"	""	"26.8"	"17.0"	""	"788"	"35"	"35.000"	"28.000"	"0.0118986097783839"	""	"0.0006732"	"0.009074"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPGLTDTTVPR"	"[K].dIPGLTDTTVPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"3"	"3"	"0.8281"	"0.0000"	"1"	"1"	"1"	"505.28503"	"1513.84055"	"1513.84234"	"-1.18"	"-0.00060"	"13/104"	"13"	"104"	"964652.553161621"	"HCD"	"MS2"	"9.147798"	"10.1"	"100.000"	"80.1393"	"27539"	"27539"	"27526"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.4"	""	"12.9"	""	"15.8"	""	"12.5"	""	"22.0"	"21.3"	""	"776"	"64"	"35.000"	"28.000"	"1.46835722870232E-05"	"27"	"0"	"3.38E-05"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPGLTDTTVPR"	"[K].dIPGLTDTTVPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"757.42426"	"1513.84123"	"1513.84234"	"-0.73"	"-0.00055"	"11/104"	"11"	"104"	"330453.350097656"	"HCD"	"MS2"	"4.606509"	"14.3"	"100.000"	"80.4914"	"27679"	"27679"	"27661"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.9"	""	"20.4"	""	"18.3"	""	"30.4"	""	"23.1"	"24.8"	""	"761"	"34"	"35.000"	"28.000"	"0.0148372925930424"	""	"0.0002479"	"0.005971"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPGLTDTTVPR"	"[K].dIPGLTDTTVPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"3"	"3"	"0.8298"	"0.0000"	"1"	"1"	"1"	"505.28528"	"1513.84128"	"1513.84234"	"-0.70"	"-0.00035"	"14/104"	"14"	"104"	"849228.928710938"	"HCD"	"MS2"	"9.954425"	"10.5"	"100.000"	"80.1503"	"27540"	"27540"	"27527"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.1"	""	"13.2"	""	"14.3"	""	"16.2"	""	"19.8"	"21.4"	""	"761"	"47"	"35.000"	"28.000"	"0.000806036411962054"	"24"	"0"	"0.00012"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPGLTDTTVPR"	"[K].dIPGLTDTTVPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"757.42444"	"1513.84160"	"1513.84234"	"-0.49"	"-0.00037"	"8/104"	"8"	"104"	"333527.02947998"	"HCD"	"MS2"	"5.047266"	"12.6"	"100.000"	"80.5360"	"27699"	"27699"	"27680"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.5"	""	"15.7"	""	"19.5"	""	"24.3"	""	"20.8"	"22.7"	""	"754"	"38"	"35.000"	"28.000"	"0.00612831880917932"	""	"0.0001301"	"0.004408"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPGLTDTTVPR"	"[K].dIPGLTDTTVPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"0.6825"	"0.0000"	"1"	"1"	"1"	"757.42444"	"1513.84160"	"1513.84234"	"-0.49"	"-0.00037"	"15/104"	"15"	"104"	"1451592.80505371"	"HCD"	"MS2"	"0"	"46.7"	"100.000"	"80.2430"	"27581"	"27581"	"27566"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.0"	""	"70.3"	""	"74.4"	""	"69.5"	""	"75.6"	"75.8"	""	"754"	"63"	"35.000"	"28.000"	"1.84221939472248E-05"	""	"0"	"4.766E-07"	"1.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPGLTDTTVPR"	"[K].dIPGLTDTTVPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"0.6610"	"0.0000"	"1"	"1"	"1"	"757.42480"	"1513.84233"	"1513.84234"	"0.00"	"0.00000"	"10/104"	"10"	"104"	"1395459.23303223"	"HCD"	"MS2"	"0"	"48.7"	"100.000"	"80.1758"	"27551"	"27551"	"27534"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.1"	""	"71.4"	""	"79.7"	""	"78.7"	"0.4"	"86.2"	"79.8"	""	"766"	"59"	"35.000"	"28.000"	"4.74459092641132E-05"	""	"0"	"2.205E-07"	"1.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPGLTDTTVPR"	"[K].dIPGLTDTTVPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"757.42651"	"1513.84575"	"1513.84234"	"2.25"	"0.00171"	"5/104"	"5"	"104"	"252686.949645996"	"HCD"	"MS2"	"13.88689"	"11.3"	"100.000"	"79.8941"	"27437"	"27437"	"27418"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.3"	""	"16.8"	""	"16.9"	""	"16.6"	""	"23.0"	"14.9"	""	"756"	"38"	"35.000"	"28.000"	"0.00659920773803951"	""	"0"	"0.0007044"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQVDPLQVK"	"[K].eQVDPLQVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.6071"	"0.0000"	"1"	"1"	"1"	"505.30389"	"1513.89713"	"1513.89901"	"-1.25"	"-0.00063"	"9/84"	"9"	"84"	"469048.44342041"	"HCD"	"MS2"	"20.48655"	"18.7"	"100.000"	"68.3742"	"22780"	"22780"	"22751"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.2"	""	"19.6"	""	"27.2"	""	"30.6"	""	"32.3"	"38.9"	""	"645"	"28"	"35.000"	"28.000"	"0.0518238554096653"	"25"	"0.0008629"	"0.009769"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQVDPLQVK"	"[K].eQVDPLQVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"757.45306"	"1513.89885"	"1513.89901"	"-0.11"	"-0.00008"	"8/84"	"8"	"84"	"253492.023071289"	"HCD"	"MS2"	"30.71073"	"20.1"	"100.000"	"68.2935"	"22747"	"22747"	"22719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.7"	""	"21.8"	""	"27.5"	""	"30.3"	""	"40.8"	"41.0"	""	"629"	"9"	"34.000"	"27.000"	"4.36134708180209"	"13"	"0.005617"	"0.06328"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQVDPLQVK"	"[K].eQVDPLQVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"757.45313"	"1513.89897"	"1513.89901"	"-0.03"	"-0.00002"	"6/84"	"6"	"84"	"248676.589233398"	"HCD"	"MS2"	"39.33812"	"21.6"	"100.000"	"68.3824"	"22769"	"22769"	"22742"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.0"	""	"19.2"	""	"28.2"	""	"33.1"	"0.2"	"39.3"	"50.5"	""	"629"	"26"	"34.000"	"27.000"	"0.0834873449241308"	""	"0.002056"	"0.02272"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSQSFETGSVR"	"[R].tSSQSFETGSVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI55"	"Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Rattus norvegicus OX=10116 GN=Ngly1 PE=2 SV=2"	"Q5XI55"	"Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Rattus norvegicus OX=10116 GN=Ngly1 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"757.88562"	"1514.76396"	"1514.76482"	"-0.56"	"-0.00043"	"7/122"	"7"	"122"	"160495.43560791"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"36.0202"	"9655"	"9655"	"9625"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.4"	""	"14.8"	""	"15.8"	""	"18.7"	""	"18.2"	"23.3"	""	"627"	"42"	"34.000"	"27.000"	"0.00219400465746713"	"16"	"0"	"0.0001217"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQYEAMAEK"	"[R].sQYEAMAEk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"757.89874"	"1514.79021"	"1514.79250"	"-1.51"	"-0.00115"	"10/92"	"10"	"92"	"281786.249023438"	"HCD"	"MS2"	"0"	"29.9"	"100.000"	"52.0701"	"16170"	"16170"	"16147"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.4"	""	"44.5"	""	"40.0"	""	"34.9"	""	"53.2"	"65.7"	""	"755"	"27"	"35.000"	"28.000"	"0.0820194695021064"	"14"	"0.0002479"	"0.005134"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQYEAMAEK"	"[R].sQYEAMAEk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.9800"	"0.0000"	"1"	"1"	"1"	"757.89941"	"1514.79155"	"1514.79250"	"-0.63"	"-0.00047"	"8/92"	"8"	"92"	"700836.442810059"	"HCD"	"MS2"	"0"	"64.4"	"100.000"	"51.6487"	"16009"	"16009"	"15989"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.6"	""	"77.2"	""	"99.2"	""	"69.6"	"2.2"	"114.5"	"142.0"	""	"759"	"50"	"35.000"	"28.000"	"0.000414201607682303"	"17"	"0"	"0.0001724"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQYEAMAEK"	"[R].sQYEAMAEk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"757.89941"	"1514.79155"	"1514.79250"	"-0.63"	"-0.00047"	"8/92"	"8"	"92"	"2277398.45996094"	"HCD"	"MS2"	"2.657784"	"192.3"	"100.000"	"51.3261"	"15878"	"15878"	"15861"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"354.7"	""	"239.8"	""	"262.4"	""	"194.3"	"0.9"	"345.3"	"424.1"	""	"759"	"50"	"35.000"	"28.000"	"0.000389234906012409"	"22"	"0"	"0.0003688"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQYEAMAEK"	"[R].sQYEAMAEk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.9400"	"0.0000"	"1"	"1"	"1"	"505.60205"	"1514.79160"	"1514.79250"	"-0.60"	"-0.00030"	"7/92"	"7"	"92"	"3731871.54559326"	"HCD"	"MS2"	"25.16058"	"114.8"	"100.000"	"51.6953"	"16017"	"16017"	"15995"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"196.8"	""	"138.9"	""	"172.7"	""	"128.6"	""	"201.2"	"251.4"	""	"759"	"50"	"35.000"	"28.000"	"0.000339790928526071"	"19"	"0"	"0.000425"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQYEAMAEK"	"[R].sQYEAMAEk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"505.60223"	"1514.79215"	"1514.79250"	"-0.23"	"-0.00012"	"7/92"	"7"	"92"	"3883021.01263428"	"HCD"	"MS2"	"20.20824"	"118.3"	"100.000"	"51.3720"	"15896"	"15896"	"15877"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"196.6"	""	"157.7"	""	"157.9"	""	"143.0"	""	"206.1"	"259.9"	""	"763"	"42"	"35.000"	"28.000"	"0.00215523455890894"	"22"	"0"	"0.0004557"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQYEAMAEK"	"[R].sQYEAMAEk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"757.89990"	"1514.79253"	"1514.79250"	"0.02"	"0.00001"	"8/92"	"8"	"92"	"3125625.97418213"	"HCD"	"MS2"	"0"	"268.0"	"100.000"	"51.7251"	"16029"	"16029"	"16011"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"469.0"	""	"324.7"	""	"401.0"	""	"279.7"	""	"476.6"	"588.4"	""	"768"	"52"	"35.000"	"28.000"	"0.000266275509510362"	"18"	"0"	"0.0002588"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVFNDELPAR"	"[K].ePVFNDELPAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"0.5116"	"0.0000"	"1"	"1"	"1"	"758.40320"	"1515.79912"	"1515.80047"	"-0.89"	"-0.00068"	"8/104"	"8"	"104"	"1133011.6472168"	"HCD"	"MS2"	"0"	"49.7"	"100.000"	"71.1047"	"23879"	"23879"	"23861"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.1"	""	"76.2"	""	"79.4"	""	"69.2"	"1.6"	"92.0"	"91.4"	""	"850"	"43"	"36.000"	"29.000"	"0.00198330236633573"	""	"0"	"0.0005953"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVFNDELPAR"	"[K].ePVFNDELPAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"0.3902"	"0.0000"	"1"	"1"	"1"	"758.40338"	"1515.79949"	"1515.80047"	"-0.65"	"-0.00049"	"7/104"	"7"	"104"	"1187536.359375"	"HCD"	"MS2"	"0"	"49.9"	"100.000"	"70.9787"	"23842"	"23842"	"23825"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.9"	""	"69.8"	""	"74.3"	""	"74.7"	"1.7"	"95.6"	"96.4"	""	"843"	"41"	"36.000"	"29.000"	"0.003612414517646"	""	"0"	"0.0004441"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVFNDELPAR"	"[K].ePVFNDELPAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"0.6275"	"0.0000"	"1"	"1"	"1"	"758.40356"	"1515.79985"	"1515.80047"	"-0.41"	"-0.00031"	"9/104"	"9"	"104"	"816737.647521973"	"HCD"	"MS2"	"6.447695"	"38.1"	"100.000"	"70.6844"	"23721"	"23721"	"23701"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.5"	""	"55.4"	""	"54.9"	""	"64.0"	"2.6"	"66.7"	"66.7"	""	"843"	"51"	"36.000"	"29.000"	"0.000367111153166488"	""	"0"	"5.983E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVFNDELPAR"	"[K].ePVFNDELPAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"0.4524"	"0.0000"	"1"	"1"	"1"	"758.40381"	"1515.80034"	"1515.80047"	"-0.09"	"-0.00007"	"7/104"	"7"	"104"	"724260.49822998"	"HCD"	"MS2"	"0"	"34.7"	"100.000"	"70.8034"	"23756"	"23756"	"23733"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.2"	""	"47.3"	""	"52.6"	""	"52.0"	""	"63.9"	"67.4"	""	"842"	"42"	"36.000"	"29.000"	"0.00277512209897859"	""	"0"	"4.161E-05"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPSQSDPVLK"	"[R].sPSQSDPVLk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"758.44147"	"1515.87566"	"1515.87828"	"-1.73"	"-0.00131"	"9/94"	"9"	"94"	"1305688.98480225"	"HCD"	"MS2"	"24.47705"	"88.7"	"100.000"	"48.4448"	"14691"	"14691"	"14671"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.8"	""	"102.0"	""	"122.6"	""	"150.5"	"2.5"	"162.9"	"174.4"	""	"889"	"49"	"36.000"	"29.000"	"0.000577925377435798"	"24"	"0"	"0.0002646"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPSQSDPVLK"	"[R].sPSQSDPVLk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"758.44171"	"1515.87615"	"1515.87828"	"-1.41"	"-0.00107"	"9/94"	"9"	"94"	"1573154.02667236"	"HCD"	"MS2"	"4.134864"	"105.1"	"100.000"	"48.1489"	"14583"	"14583"	"14562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"148.4"	""	"128.9"	""	"143.5"	""	"184.1"	""	"198.9"	"194.1"	""	"890"	"52"	"36.000"	"29.000"	"0.000259035931908038"	"26"	"0"	"6.131E-05"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTMGDAPDFDR"	"[R].yTMGDAPDFDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P08009"	"Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08009"	"Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"758.84961"	"1516.69194"	"1516.69396"	"-1.33"	"-0.00101"	"7/96"	"7"	"96"	"898656.728393555"	"HCD"	"MS2"	"14.53998"	"48.2"	"100.000"	"69.2823"	"23150"	"23150"	"23129"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.1"	""	"53.9"	""	"59.9"	""	"60.2"	""	"106.7"	"108.9"	""	"304"	"24"	"31.000"	"24.000"	"0.0543054713990932"	"14"	"0"	"0.00229"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTMGDAPDFDR"	"[R].yTMGDAPDFDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P08009"	"Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08009"	"Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"758.85059"	"1516.69390"	"1516.69396"	"-0.04"	"-0.00003"	"8/96"	"8"	"96"	"1148629.8793335"	"HCD"	"MS2"	"18.89563"	"62.4"	"100.000"	"69.4571"	"23207"	"23207"	"23187"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.7"	""	"67.7"	""	"73.7"	""	"89.0"	"0.1"	"133.5"	"148.7"	""	"322"	"33"	"32.000"	"25.000"	"0.00848840076890744"	"15"	"0"	"0.0007218"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSEQELEFHR"	"[K].lSEQELEFHR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3KR86"	"MICOS complex subunit Mic60 (Fragment) OS=Rattus norvegicus OX=10116 GN=Immt PE=1 SV=1"	"Q3KR86"	"MICOS complex subunit Mic60 (Fragment) OS=Rattus norvegicus OX=10116 GN=Immt PE=1 SV=1"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"506.26932"	"1516.79340"	"1516.79572"	"-1.53"	"-0.00077"	"12/94"	"12"	"94"	"2340769.47607422"	"HCD"	"MS2"	"20.62785"	"33.1"	"100.000"	"59.2257"	"19083"	"19083"	"19064"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.5"	""	"48.1"	""	"51.9"	""	"51.1"	"0.2"	"53.1"	"66.1"	""	"882"	"57"	"36.000"	"29.000"	"9.27766291937015E-05"	"28"	"0"	"0.0002499"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSEQELEFHR"	"[K].lSEQELEFHR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3KR86"	"MICOS complex subunit Mic60 (Fragment) OS=Rattus norvegicus OX=10116 GN=Immt PE=1 SV=1"	"Q3KR86"	"MICOS complex subunit Mic60 (Fragment) OS=Rattus norvegicus OX=10116 GN=Immt PE=1 SV=1"	"0"	"3"	"3"	"0.8033"	"0.0000"	"1"	"1"	"1"	"506.26978"	"1516.79477"	"1516.79572"	"-0.63"	"-0.00032"	"13/94"	"13"	"94"	"2432384.74255371"	"HCD"	"MS2"	"8.490665"	"30.2"	"100.000"	"59.0098"	"19010"	"19010"	"18989"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.8"	""	"41.2"	""	"32.7"	""	"51.8"	""	"47.4"	"68.1"	""	"882"	"61"	"36.000"	"29.000"	"3.76217150281757E-05"	"28"	"0"	"0.000141"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HINDLYEDLR"	"[K].hINDLYEDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.8980"	"0.0000"	"1"	"1"	"1"	"506.27029"	"1516.79633"	"1516.79572"	"0.40"	"0.00020"	"7/94"	"7"	"94"	"882157.085388184"	"HCD"	"MS2"	"7.987426"	"15.7"	"100.000"	"67.5293"	"22421"	"22421"	"22401"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.3"	""	"21.4"	""	"21.8"	""	"25.1"	""	"27.6"	"31.5"	""	"894"	"49"	"36.000"	"29.000"	"0.000537412202273983"	"21"	"0"	"0.0001558"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDDIADGNPK"	"[R].nDDIADGNPk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"758.90259"	"1516.79790"	"1516.80076"	"-1.88"	"-0.00143"	"8/98"	"8"	"98"	"547023.690856934"	"HCD"	"MS2"	"100"	"46.4"	"100.000"	"39.7489"	"11168"	"11168"	"11140"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.3"	""	"64.8"	""	"63.6"	""	"72.0"	""	"90.3"	"84.3"	""	"928"	"38"	"36.000"	"29.000"	"0.00810061478955113"	"15"	"0"	"8.052E-05"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDDIADGNPK"	"[R].nDDIADGNPk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"758.90399"	"1516.80071"	"1516.80076"	"-0.03"	"-0.00003"	"8/98"	"8"	"98"	"606112.940063477"	"HCD"	"MS2"	"0"	"53.3"	"100.000"	"39.9795"	"11253"	"11253"	"11225"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"93.8"	""	"76.7"	""	"82.3"	""	"65.6"	"0.5"	"81.3"	"103.6"	""	"936"	"56"	"36.000"	"29.000"	"0.000131900321183176"	"24"	"0"	"3.968E-05"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATIDQNLEDLR"	"[K].aTIDQNLEDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"3"	"3"	"0.5405"	"0.0000"	"1"	"1"	"1"	"506.27634"	"1516.81446"	"1516.81685"	"-1.58"	"-0.00080"	"11/106"	"11"	"106"	"736261.651306152"	"HCD"	"MS2"	"22.36537"	"14.6"	"100.000"	"74.2675"	"25166"	"25166"	"25142"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.5"	""	"20.1"	""	"20.9"	""	"19.0"	""	"28.5"	"25.2"	""	"981"	"37"	"36.000"	"29.000"	"0.0100609504871394"	""	"0.0008629"	"0.01015"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATIDQNLEDLR"	"[K].aTIDQNLEDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"506.27670"	"1516.81556"	"1516.81685"	"-0.85"	"-0.00043"	"13/106"	"13"	"106"	"762124.153259277"	"HCD"	"MS2"	"32.0676"	"14.6"	"100.000"	"74.1139"	"25117"	"25117"	"25089"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.4"	""	"22.6"	""	"14.7"	""	"19.9"	""	"32.0"	"33.1"	""	"969"	"44"	"36.000"	"29.000"	"0.00178769646507238"	""	"0.0001301"	"0.004788"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATIDQNLEDLR"	"[K].aTIDQNLEDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.6034"	"0.0000"	"1"	"1"	"1"	"758.91144"	"1516.81560"	"1516.81685"	"-0.83"	"-0.00063"	"16/106"	"16"	"106"	"1006884.60083008"	"HCD"	"MS2"	"0"	"52.5"	"100.000"	"73.9067"	"25032"	"25032"	"25014"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.6"	""	"53.2"	""	"57.0"	""	"103.1"	"0.2"	"81.6"	"106.4"	""	"965"	"58"	"36.000"	"29.000"	"7.31976802299131E-05"	""	"0"	"3.929E-06"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATIDQNLEDLR"	"[K].aTIDQNLEDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"758.91162"	"1516.81597"	"1516.81685"	"-0.58"	"-0.00044"	"9/106"	"9"	"106"	"1181052.76739502"	"HCD"	"MS2"	"0"	"37.5"	"100.000"	"74.0691"	"25085"	"25085"	"25070"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.8"	""	"32.1"	""	"42.9"	""	"74.1"	"0.6"	"61.3"	"83.9"	""	"954"	"54"	"36.000"	"29.000"	"0.000171600432869289"	""	"0"	"6.429E-06"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATIDQNLEDLR"	"[K].aTIDQNLEDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.6170"	"0.0000"	"1"	"1"	"1"	"758.91199"	"1516.81670"	"1516.81685"	"-0.10"	"-0.00008"	"9/106"	"9"	"106"	"2331846.57641602"	"HCD"	"MS2"	"16.56571"	"116.8"	"100.000"	"74.2042"	"25154"	"25154"	"25137"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"188.7"	""	"115.6"	""	"135.2"	""	"202.5"	""	"203.9"	"262.5"	""	"961"	"47"	"36.000"	"29.000"	"0.000913468113503146"	""	"0"	"5.818E-05"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATIDQNLEDLR"	"[K].aTIDQNLEDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.6170"	"0.0000"	"1"	"1"	"1"	"758.91241"	"1516.81755"	"1516.81685"	"0.46"	"0.00035"	"9/106"	"9"	"106"	"1801023.64251709"	"HCD"	"MS2"	"22.22716"	"98.2"	"100.000"	"74.3946"	"25218"	"25218"	"25201"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"146.7"	""	"101.2"	""	"117.5"	""	"182.8"	"1.0"	"175.7"	"205.8"	""	"951"	"47"	"36.000"	"29.000"	"0.000968613507949069"	""	"0"	"9.728E-06"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQVEQELTTLR"	"[K].aQVEQELTTLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"506.28894"	"1516.85227"	"1516.85324"	"-0.64"	"-0.00032"	"12/108"	"12"	"108"	"479241.299560547"	"HCD"	"MS2"	"49.64725"	"11.3"	"100.000"	"74.4174"	"25227"	"25227"	"25201"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.4"	""	"14.0"	""	"16.9"	""	"18.6"	""	"20.4"	"21.8"	""	"980"	"34"	"36.000"	"29.000"	"0.0216868302457687"	"27"	"0"	"0.0004114"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQVEQELTTLR"	"[K].aQVEQELTTLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"758.93005"	"1516.85283"	"1516.85324"	"-0.27"	"-0.00020"	"6/108"	"6"	"108"	"242590.222412109"	"HCD"	"MS2"	"58.79711"	"16.9"	"100.000"	"74.4669"	"25260"	"25260"	"25244"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.2"	""	"21.0"	""	"19.1"	""	"26.7"	""	"29.7"	"38.7"	""	"985"	"12"	"36.000"	"29.000"	"3.46263117542788"	"20"	"0.0002479"	"0.005243"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENVLLSSELQR"	"[K].eNVLLSSELQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C219"	"Sarcolemmal membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Slmap PE=1 SV=1"	"P0C219"	"Sarcolemmal membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Slmap PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"758.93103"	"1516.85478"	"1516.85324"	"1.02"	"0.00077"	"5/112"	"5"	"112"	"146953.776367188"	"HCD"	"MS2"	"66.96631"	"10.1"	"100.000"	"73.1857"	"24727"	"24727"	"24700"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.3"	""	"7.5"	""	"12.6"	""	"18.0"	""	"23.3"	"19.9"	""	"1007"	"5"	"37.000"	"30.000"	"14.4211360784796"	"13"	"0.00413"	"0.04559"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVDEVSPEK"	"[K].vGVDEVSPEk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"758.93408"	"1516.86089"	"1516.86229"	"-0.93"	"-0.00070"	"6/82"	"6"	"82"	"1015582.98980713"	"HCD"	"MS2"	"8.953807"	"81.6"	"100.000"	"57.0472"	"18195"	"18195"	"18176"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"112.8"	""	"96.1"	""	"73.5"	""	"168.0"	""	"177.8"	"147.2"	""	"983"	"42"	"36.000"	"29.000"	"0.00290752543197246"	"26"	"0"	"0.0002627"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVDEVSPEK"	"[K].vGVDEVSPEk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"758.93500"	"1516.86272"	"1516.86229"	"0.28"	"0.00021"	"13/82"	"13"	"82"	"672545.281433105"	"HCD"	"MS2"	"15.85367"	"52.2"	"100.000"	"56.7896"	"18104"	"18104"	"18086"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"76.4"	""	"64.6"	""	"47.5"	""	"113.1"	"0.6"	"104.2"	"88.7"	""	"958"	"45"	"36.000"	"29.000"	"0.00156796192846963"	"27"	"0"	"0.0001523"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSDTELAAPK"	"[K].aGSDTELAAPk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"759.43213"	"1517.85698"	"1517.85754"	"-0.37"	"-0.00028"	"10/86"	"10"	"86"	"1479158.48626709"	"HCD"	"MS2"	"9.751712"	"107.0"	"100.000"	"47.3975"	"14277"	"14277"	"14254"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"169.4"	""	"127.9"	""	"167.7"	""	"180.0"	"0.1"	"152.1"	"214.1"	""	"1023"	"47"	"37.000"	"30.000"	"0.000972401540180767"	"24"	"0"	"3.053E-05"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSDTELAAPK"	"[K].aGSDTELAAPk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8679"	"0.0000"	"1"	"1"	"1"	"759.43225"	"1517.85723"	"1517.85754"	"-0.21"	"-0.00016"	"15/86"	"15"	"86"	"2598100.57244873"	"HCD"	"MS2"	"4.136"	"159.0"	"100.000"	"47.6965"	"14399"	"14399"	"14381"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"250.0"	""	"172.2"	""	"240.6"	""	"258.3"	"2.2"	"243.6"	"337.9"	""	"1029"	"53"	"37.000"	"30.000"	"0.000278859458111635"	"23"	"0"	"1.124E-05"	"0.892"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSDTELAAPK"	"[K].aGSDTELAAPk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"759.43237"	"1517.85747"	"1517.85754"	"-0.05"	"-0.00004"	"9/86"	"9"	"86"	"2217811.89715576"	"HCD"	"MS2"	"7.471622"	"140.9"	"100.000"	"48.0342"	"14525"	"14525"	"14513"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"222.5"	""	"158.5"	""	"183.2"	""	"232.5"	""	"236.8"	"303.8"	""	"1029"	"51"	"37.000"	"30.000"	"0.000432897800376453"	"25"	"0"	"4.295E-05"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSDTELAAPK"	"[K].aGSDTELAAPk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.6122"	"0.0000"	"1"	"1"	"1"	"506.62411"	"1517.85779"	"1517.85754"	"0.16"	"0.00008"	"6/86"	"6"	"86"	"11741811.4820557"	"HCD"	"MS2"	"46.43067"	"245.8"	"100.000"	"47.5401"	"14335"	"14335"	"14317"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"405.5"	""	"278.6"	""	"357.0"	""	"405.5"	"7.0"	"375.4"	"496.8"	""	"1017"	"49"	"37.000"	"30.000"	"0.000586530981602025"	""	"0"	"1.368E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSDTELAAPK"	"[K].aGSDTELAAPk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8393"	"0.0000"	"1"	"1"	"1"	"759.43329"	"1517.85930"	"1517.85754"	"1.16"	"0.00088"	"18/86"	"18"	"86"	"1844016.24072266"	"HCD"	"MS2"	"11.08408"	"122.2"	"100.000"	"47.7350"	"14403"	"14403"	"14381"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"217.2"	""	"145.9"	""	"163.6"	""	"210.0"	"3.0"	"180.9"	"235.5"	""	"1033"	"56"	"37.000"	"30.000"	"0.000121079418311274"	"25"	"0"	"1.542E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"759.44415"	"1517.88103"	"1517.88270"	"-1.10"	"-0.00083"	"7/78"	"7"	"78"	"2341329.13659668"	"HCD"	"MS2"	"18.78008"	"140.6"	"100.000"	"78.7434"	"26978"	"26978"	"26965"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"272.9"	""	"184.9"	""	"170.8"	""	"149.3"	"0.2"	"298.6"	"255.8"	""	"938"	"25"	"36.000"	"29.000"	"0.149338863768955"	"22"	"0.001374"	"0.01656"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"506.63193"	"1517.88123"	"1517.88270"	"-0.97"	"-0.00049"	"9/78"	"9"	"78"	"1461855.07617188"	"HCD"	"MS2"	"9.39702"	"42.3"	"100.000"	"78.7112"	"26966"	"26966"	"26949"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.5"	""	"57.2"	""	"57.0"	""	"50.7"	""	"90.6"	"73.8"	""	"936"	"28"	"36.000"	"29.000"	"0.0740024082378539"	""	"0.001546"	"0.0194"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.4231"	"0.0000"	"1"	"1"	"1"	"506.63193"	"1517.88123"	"1517.88270"	"-0.97"	"-0.00049"	"9/78"	"9"	"78"	"1154649.69134521"	"HCD"	"MS2"	"7.082922"	"36.8"	"100.000"	"78.4924"	"26872"	"26872"	"26855"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"74.3"	""	"52.5"	""	"43.5"	""	"39.1"	""	"73.9"	"67.8"	""	"936"	"26"	"36.000"	"29.000"	"0.130390470691873"	""	"0.000936"	"0.01143"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"759.44446"	"1517.88164"	"1517.88270"	"-0.70"	"-0.00053"	"7/78"	"7"	"78"	"1502387.48779297"	"HCD"	"MS2"	"1.816935"	"101.6"	"100.000"	"78.4642"	"26866"	"26866"	"26851"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"194.1"	""	"143.8"	""	"112.2"	""	"103.2"	""	"225.1"	"191.9"	""	"936"	"54"	"36.000"	"29.000"	"0.0001910934728037"	"26"	"0"	"0.003265"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"759.44458"	"1517.88188"	"1517.88270"	"-0.54"	"-0.00041"	"7/78"	"7"	"78"	"319990.376281738"	"HCD"	"MS2"	"25.67758"	"24.2"	"100.000"	"79.0550"	"27103"	"27103"	"27083"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.7"	""	"33.5"	""	"31.0"	""	"25.7"	""	"53.8"	"45.4"	""	"936"	"27"	"36.000"	"29.000"	"0.0995969073519909"	"24"	"0.003189"	"0.03223"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.5172"	"0.0000"	"1"	"1"	"1"	"506.63223"	"1517.88214"	"1517.88270"	"-0.36"	"-0.00018"	"9/78"	"9"	"78"	"1290197.84075928"	"HCD"	"MS2"	"9.704659"	"40.9"	"100.000"	"78.7804"	"26988"	"26988"	"26972"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"77.2"	""	"50.1"	""	"52.6"	""	"51.1"	"0.9"	"81.1"	"74.7"	""	"934"	"29"	"36.000"	"29.000"	"0.0570580441296996"	"28"	"0.002871"	"0.02719"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"759.44476"	"1517.88225"	"1517.88270"	"-0.29"	"-0.00022"	"8/78"	"8"	"78"	"2164841.05212402"	"HCD"	"MS2"	"2.70924"	"140.3"	"100.000"	"78.5659"	"26902"	"26902"	"26884"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"270.4"	""	"192.5"	""	"169.5"	""	"160.3"	"2.4"	"300.9"	"233.5"	""	"949"	"50"	"36.000"	"29.000"	"0.000494579620247123"	"22"	"0.0001301"	"0.004722"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.4333"	"0.0000"	"1"	"1"	"1"	"506.63235"	"1517.88251"	"1517.88270"	"-0.12"	"-0.00006"	"9/78"	"9"	"78"	"1050433.99713135"	"HCD"	"MS2"	"21.28468"	"31.8"	"100.000"	"78.4319"	"26853"	"26853"	"26839"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.4"	""	"38.9"	""	"47.3"	""	"40.7"	""	"63.4"	"58.8"	""	"949"	"30"	"36.000"	"29.000"	"0.0526303449842009"	""	"0.004069"	"0.04409"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"759.44489"	"1517.88249"	"1517.88270"	"-0.13"	"-0.00010"	"7/78"	"7"	"78"	"288920.85369873"	"HCD"	"MS2"	"0"	"19.7"	"100.000"	"78.2523"	"26775"	"26775"	"26754"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.9"	""	"27.0"	""	"26.1"	""	"24.5"	""	"41.4"	"32.4"	""	"949"	"37"	"36.000"	"29.000"	"0.00908314436422505"	"20"	"0.0004639"	"0.007468"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"759.44513"	"1517.88298"	"1517.88270"	"0.19"	"0.00014"	"7/78"	"7"	"78"	"1868469.56774902"	"HCD"	"MS2"	"26.06361"	"120.4"	"100.000"	"78.8452"	"27015"	"27015"	"27001"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"234.0"	""	"164.9"	""	"146.3"	""	"132.5"	""	"247.0"	"217.9"	""	"912"	"33"	"36.000"	"29.000"	"0.0229068220822208"	"20"	"0.0003538"	"0.006699"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTQLALEEK"	"[R].qTQLALEEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"2"	"2"	"0.7288"	"0.0000"	"1"	"1"	"1"	"759.45087"	"1517.89446"	"1517.89393"	"0.35"	"0.00026"	"8/92"	"8"	"92"	"503527.129394531"	"HCD"	"MS2"	"25.80937"	"44.7"	"100.000"	"57.4804"	"18371"	"18371"	"18351"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.6"	""	"34.9"	""	"31.6"	""	"92.8"	"0.5"	"115.1"	"118.5"	""	"874"	"59"	"36.000"	"29.000"	"5.908557101159E-05"	""	"0"	"4.486E-05"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTQLALEEK"	"[R].qTQLALEEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"2"	"2"	"0.7414"	"0.0000"	"1"	"1"	"1"	"759.45093"	"1517.89458"	"1517.89393"	"0.43"	"0.00032"	"16/92"	"16"	"92"	"513773.397338867"	"HCD"	"MS2"	"30.36603"	"43.7"	"100.000"	"57.2916"	"18309"	"18309"	"18281"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.3"	""	"35.9"	""	"28.2"	""	"97.8"	""	"106.5"	"116.8"	""	"874"	"58"	"36.000"	"29.000"	"6.49353875679422E-05"	""	"0"	"8.992E-05"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSMGDAPDYDR"	"[K].ySMGDAPDYDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"759.83917"	"1518.67107"	"1518.67322"	"-1.42"	"-0.00108"	"10/96"	"10"	"96"	"1384611.96929932"	"HCD"	"MS2"	"11.3525"	"77.8"	"100.000"	"53.0564"	"16584"	"16584"	"16561"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"157.2"	""	"76.4"	""	"88.3"	""	"107.8"	""	"155.4"	"152.4"	""	"177"	"45"	"29.000"	"22.000"	"0.000270983763881625"	""	"0"	"3.059E-05"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSMGDAPDYDR"	"[K].ySMGDAPDYDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"759.83978"	"1518.67229"	"1518.67322"	"-0.62"	"-0.00047"	"8/96"	"8"	"96"	"1004310.77813721"	"HCD"	"MS2"	"13.31079"	"63.8"	"100.000"	"53.3219"	"16681"	"16681"	"16658"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"122.3"	""	"67.5"	""	"73.6"	""	"81.1"	"0.1"	"126.4"	"134.2"	""	"191"	"44"	"29.000"	"22.000"	"0.000378445522713945"	""	"0"	"8.778E-05"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAMGDAPDYDR"	"[R].yAmGDAPDYDR.[S]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"759.83997"	"1518.67266"	"1518.67322"	"-0.38"	"-0.00028"	"6/90"	"6"	"90"	"153942.397277832"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"38.9834"	"10856"	"10856"	"10828"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.2"	""	"10.5"	""	"11.0"	""	"17.0"	""	"17.3"	"15.7"	""	"193"	"19"	"29.000"	"22.000"	"0.122610401152624"	"22"	"0.0023"	"0.02327"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAMGDAPDYDR"	"[R].yAmGDAPDYDR.[S]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"759.84015"	"1518.67302"	"1518.67322"	"-0.13"	"-0.00010"	"11/90"	"11"	"90"	"239620.218200684"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"39.2463"	"10954"	"10954"	"10931"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.9"	""	"11.7"	""	"19.6"	""	"17.4"	""	"23.5"	"26.6"	""	"196"	"33"	"29.000"	"22.000"	"0.00495708168763052"	""	"0.000936"	"0.01275"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSMGDAPDYDR"	"[K].ySMGDAPDYDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"759.84039"	"1518.67351"	"1518.67322"	"0.19"	"0.00014"	"9/96"	"9"	"96"	"1982264.59729004"	"HCD"	"MS2"	"0"	"102.7"	"100.000"	"53.3463"	"16702"	"16702"	"16684"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"201.2"	""	"103.4"	""	"128.0"	""	"110.0"	"0.6"	"203.5"	"227.5"	""	"196"	"50"	"29.000"	"22.000"	"0.000109200864291989"	""	"0"	"1.132E-05"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSMGDAPDYDR"	"[K].ySMGDAPDYDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.2115"	"0.0000"	"1"	"1"	"1"	"759.84058"	"1518.67388"	"1518.67322"	"0.43"	"0.00033"	"10/96"	"10"	"96"	"2065194.06188965"	"HCD"	"MS2"	"1.027206"	"107.9"	"100.000"	"53.6232"	"16804"	"16804"	"16785"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"207.3"	""	"114.0"	""	"126.1"	""	"125.1"	"0.1"	"224.2"	"226.9"	""	"201"	"52"	"30.000"	"23.000"	"6.25411786595005E-05"	""	"0"	"2.051E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLADPSDDTK"	"[R].vLADPSDDTk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8167"	"0.0000"	"1"	"1"	"1"	"759.92426"	"1518.84123"	"1518.84156"	"-0.21"	"-0.00016"	"7/82"	"7"	"82"	"2118322.73913574"	"HCD"	"MS2"	"0"	"146.4"	"100.000"	"55.4764"	"17555"	"17555"	"17543"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"272.8"	""	"212.1"	""	"209.2"	""	"188.0"	""	"240.6"	"262.1"	""	"1051"	"60"	"37.000"	"30.000"	"4.79261696081531E-05"	"28"	"0"	"0.0007542"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLADPSDDTK"	"[R].vLADPSDDTk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"759.92432"	"1518.84136"	"1518.84156"	"-0.13"	"-0.00010"	"9/82"	"9"	"82"	"1171626.57397461"	"HCD"	"MS2"	"0"	"87.1"	"100.000"	"55.5734"	"17608"	"17608"	"17589"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"144.8"	""	"119.6"	""	"128.4"	""	"103.6"	""	"143.9"	"184.3"	""	"1051"	"48"	"37.000"	"30.000"	"0.000808300263479244"	"26"	"0"	"0.001099"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLADPSDDTK"	"[R].vLADPSDDTk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8036"	"0.0000"	"1"	"1"	"1"	"759.92438"	"1518.84148"	"1518.84156"	"-0.05"	"-0.00004"	"8/82"	"8"	"82"	"1084632.76989746"	"HCD"	"MS2"	"0"	"79.4"	"100.000"	"55.7918"	"17683"	"17683"	"17666"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.5"	""	"106.8"	""	"119.4"	""	"103.4"	"0.9"	"127.5"	"167.9"	""	"1051"	"56"	"37.000"	"30.000"	"0.000138220582974102"	"27"	"0"	"0.0009689"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLADPSDDTK"	"[R].vLADPSDDTk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8036"	"0.0000"	"1"	"1"	"1"	"759.92450"	"1518.84172"	"1518.84156"	"0.11"	"0.00008"	"8/82"	"8"	"82"	"2115058.38452148"	"HCD"	"MS2"	"0"	"143.8"	"100.000"	"55.2622"	"17481"	"17481"	"17463"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"253.6"	""	"213.7"	""	"209.0"	""	"161.3"	""	"234.0"	"289.6"	""	"1044"	"56"	"37.000"	"30.000"	"0.000130818903008276"	"27"	"0"	"0.001435"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVDQLTNDK"	"[R].qVDQLTNDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"759.92950"	"1518.85173"	"1518.85279"	"-0.70"	"-0.00053"	"8/90"	"8"	"90"	"1257027.89788818"	"HCD"	"MS2"	"0"	"103.9"	"100.000"	"48.6880"	"14803"	"14803"	"14783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"176.5"	""	"126.0"	""	"117.5"	""	"134.6"	""	"201.6"	"231.4"	""	"1009"	"54"	"37.000"	"30.000"	"0.00018065965251828"	"28"	"0"	"0.000361"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGENADSQIK"	"[K].vGENADSQIk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P43278"	"Histone H1.0 OS=Rattus norvegicus OX=10116 GN=H1f0 PE=2 SV=2"	"P43278"	"Histone H1.0 OS=Rattus norvegicus OX=10116 GN=H1f0 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.92957"	"1518.85185"	"1518.85279"	"-0.62"	"-0.00047"	"9/92"	"9"	"92"	"392643.817443848"	"HCD"	"MS2"	"0"	"40.7"	"100.000"	"43.4769"	"12687"	"12687"	"12660"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"72.9"	""	"58.1"	""	"72.4"	""	"56.9"	""	"65.9"	"60.2"	""	"1009"	"13"	"37.000"	"30.000"	"2.49954621261016"	"13"	"0.00447"	"0.04682"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVDQLTNDK"	"[R].qVDQLTNDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"759.92969"	"1518.85210"	"1518.85279"	"-0.46"	"-0.00035"	"14/90"	"14"	"90"	"1242478.77532959"	"HCD"	"MS2"	"7.351406"	"100.5"	"100.000"	"48.3974"	"14685"	"14685"	"14658"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"182.2"	""	"135.9"	""	"120.2"	""	"140.3"	"1.2"	"187.1"	"184.3"	""	"1009"	"45"	"37.000"	"30.000"	"0.00168213625239052"	"26"	"0"	"0.0004194"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVSEENLAK"	"[R].nGVSEENLAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"759.92987"	"1518.85246"	"1518.85279"	"-0.22"	"-0.00016"	"9/94"	"9"	"94"	"190192.620117188"	"HCD"	"MS2"	"33.52492"	"19.4"	"100.000"	"45.2267"	"13393"	"13393"	"13367"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.4"	""	"20.1"	""	"22.2"	""	"36.6"	"0.5"	"39.2"	"39.8"	""	"1019"	"14"	"37.000"	"30.000"	"2.1884880943671"	"18"	"0.005921"	"0.06845"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVDQLTNDK"	"[R].qVDQLTNDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7963"	"0.0000"	"1"	"1"	"1"	"759.92987"	"1518.85246"	"1518.85279"	"-0.22"	"-0.00016"	"8/90"	"8"	"90"	"818930.049682617"	"HCD"	"MS2"	"0"	"74.8"	"100.000"	"49.1261"	"14969"	"14969"	"14950"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"116.1"	""	"103.0"	""	"82.0"	""	"90.9"	""	"148.9"	"169.1"	""	"1019"	"54"	"37.000"	"30.000"	"0.000191930585582302"	"27"	"0"	"0.0001497"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVDQLTNDK"	"[R].qVDQLTNDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7627"	"0.0000"	"1"	"1"	"1"	"759.92993"	"1518.85259"	"1518.85279"	"-0.14"	"-0.00010"	"8/90"	"8"	"90"	"1617345.9810791"	"HCD"	"MS2"	"0"	"142.1"	"100.000"	"48.8246"	"14846"	"14846"	"14824"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"250.2"	""	"188.2"	""	"159.5"	""	"190.0"	""	"281.6"	"279.0"	""	"1019"	"59"	"37.000"	"30.000"	"6.57876219906096E-05"	"30"	"0"	"0.0002367"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVDQLTNDK"	"[R].qVDQLTNDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"506.95572"	"1518.85260"	"1518.85279"	"-0.12"	"-0.00006"	"9/90"	"9"	"90"	"3220425.27215576"	"HCD"	"MS2"	"6.62097"	"100.9"	"100.000"	"49.0064"	"14920"	"14920"	"14904"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"162.9"	""	"133.5"	""	"127.6"	""	"136.8"	"0.0"	"187.4"	"208.2"	""	"1019"	"30"	"37.000"	"30.000"	"0.0526191936235433"	"23"	"0.0003538"	"0.007439"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVSEENLAK"	"[R].nGVSEENLAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"759.93030"	"1518.85332"	"1518.85279"	"0.35"	"0.00026"	"7/94"	"7"	"94"	"185898.104492188"	"HCD"	"MS2"	"27.50632"	"19.7"	"100.000"	"45.3489"	"13432"	"13432"	"13403"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.5"	""	"17.9"	""	"24.2"	""	"36.6"	""	"36.2"	"41.7"	""	"982"	"24"	"36.000"	"29.000"	"0.21731089083005"	"15"	"0.003507"	"0.03602"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGENADSQIK"	"[K].vGENADSQIk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P43278"	"Histone H1.0 OS=Rattus norvegicus OX=10116 GN=H1f0 PE=2 SV=2"	"P43278"	"Histone H1.0 OS=Rattus norvegicus OX=10116 GN=H1f0 PE=2 SV=2"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"759.93054"	"1518.85381"	"1518.85279"	"0.67"	"0.00051"	"8/92"	"8"	"92"	"514333.303039551"	"HCD"	"MS2"	"0"	"45.5"	"100.000"	"43.5190"	"12694"	"12694"	"12666"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"72.9"	""	"60.4"	""	"83.4"	""	"62.9"	""	"83.0"	"69.7"	""	"1019"	"35"	"37.000"	"30.000"	"0.0145594238184954"	"21"	"0"	"0.0001802"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGYEPPVQESV"	"[R].aDGYEPPVQESV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"760.37732"	"1519.74736"	"1519.74777"	"-0.27"	"-0.00020"	"6/106"	"6"	"106"	"218631.092956543"	"HCD"	"MS2"	"39.07358"	"10.6"	"100.000"	"73.4197"	"24835"	"24835"	"24807"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.4"	""	"10.5"	""	"12.1"	""	"18.0"	""	"21.1"	"19.6"	""	"542"	"18"	"34.000"	"27.000"	"0.454955888911214"	"18"	"0"	"0.00256"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGYEPPVQESV"	"[R].aDGYEPPVQESV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"760.37811"	"1519.74895"	"1519.74777"	"0.78"	"0.00059"	"5/106"	"5"	"106"	"208820.405334473"	"HCD"	"MS2"	"37.70225"	"11.7"	"100.000"	"73.5848"	"24889"	"24889"	"24859"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.7"	""	"13.7"	""	"14.0"	""	"19.6"	""	"26.7"	"20.6"	""	"558"	"23"	"34.000"	"27.000"	"0.136020448738845"	"18"	"0"	"0.00133"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSEIAMPGEVK"	"[M].tSSEIAMPGEVk.[A]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"760.39740"	"1519.78752"	"1519.78753"	"0.00"	"0.00000"	"7/106"	"7"	"106"	"180215.52911377"	"HCD"	"MS2"	"0"	"7.2"	"100.000"	"82.6848"	"28560"	"28560"	"28538"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.2"	""	"7.8"	""	"11.7"	""	"7.6"	""	"13.7"	"13.3"	""	"867"	"35"	"36.000"	"29.000"	"0.0148589835467886"	"20"	"0"	"0.002302"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSEIAMPGEVK"	"[M].tSSEIAMPGEVk.[A]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"0"	"2"	"2"	"0.9556"	"0.0000"	"1"	"1"	"1"	"760.39832"	"1519.78935"	"1519.78753"	"1.20"	"0.00091"	"7/106"	"7"	"106"	"206921.614196777"	"HCD"	"MS2"	"10.79082"	"8.9"	"100.000"	"82.7131"	"28574"	"28574"	"28549"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.2"	""	"12.4"	""	"15.1"	""	"9.6"	""	"15.6"	"15.6"	""	"868"	"45"	"36.000"	"29.000"	"0.00139794385541701"	"18"	"0"	"0.001348"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMTEALGPGTIR"	"[K].emTEALGPGTIR.[D]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"760.40271"	"1519.79814"	"1519.79876"	"-0.41"	"-0.00031"	"14/106"	"14"	"106"	"600241.413024902"	"HCD"	"MS2"	"34.82344"	"36.3"	"100.000"	"49.5833"	"15168"	"15168"	"15142"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.4"	""	"43.7"	""	"48.9"	""	"69.5"	""	"65.4"	"70.5"	""	"898"	"14"	"36.000"	"29.000"	"1.8460622477593"	"13"	"0.008437"	"0.1013"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSADILTEIGR"	"[R].eSSADILTEIGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"3"	"3"	"0.5870"	"0.0000"	"1"	"1"	"1"	"507.27646"	"1519.81482"	"1519.81652"	"-1.12"	"-0.00056"	"13/104"	"13"	"104"	"1720564.02307129"	"HCD"	"MS2"	"29.91465"	"18.2"	"100.000"	"84.8851"	"29427"	"29427"	"29415"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.4"	""	"25.1"	""	"23.3"	""	"28.3"	""	"37.1"	"36.8"	""	"982"	"46"	"36.000"	"29.000"	"0.00114046376701134"	""	"0"	"8.208E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSADILTEIGR"	"[R].eSSADILTEIGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"760.41113"	"1519.81499"	"1519.81652"	"-1.01"	"-0.00076"	"7/104"	"7"	"104"	"217427.080200195"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"84.6092"	"29319"	"29319"	"29304"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.7"	""	"18.1"	""	"20.9"	""	"21.6"	""	"21.2"	"21.3"	""	"983"	"41"	"36.000"	"29.000"	"0.00382404964836064"	"27"	"0"	"0.0005398"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSADILTEIGR"	"[R].eSSADILTEIGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"760.41162"	"1519.81597"	"1519.81652"	"-0.36"	"-0.00028"	"10/104"	"10"	"104"	"3940011.90893555"	"HCD"	"MS2"	"0"	"162.7"	"100.000"	"84.8992"	"29434"	"29434"	"29424"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"231.9"	""	"219.5"	""	"249.9"	""	"252.1"	"2.0"	"288.6"	"296.5"	""	"1003"	"74"	"37.000"	"30.000"	"1.82503390617794E-06"	""	"0"	"1.392E-06"	"1.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSADILTEIGR"	"[R].eSSADILTEIGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"2"	"2"	"0.8514"	"0.0000"	"1"	"1"	"1"	"760.41168"	"1519.81609"	"1519.81652"	"-0.28"	"-0.00021"	"10/104"	"10"	"104"	"878938.836853027"	"HCD"	"MS2"	"0"	"43.4"	"100.000"	"85.1674"	"29541"	"29541"	"29530"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.3"	""	"59.2"	""	"69.4"	""	"69.6"	""	"73.0"	"81.3"	""	"1021"	"74"	"37.000"	"30.000"	"2.0137045270943E-06"	"28"	"0"	"2.079E-06"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSADILTEIGR"	"[R].eSSADILTEIGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"2"	"2"	"0.7162"	"0.0000"	"1"	"1"	"1"	"760.41168"	"1519.81609"	"1519.81652"	"-0.28"	"-0.00021"	"10/104"	"10"	"104"	"4194179.40661621"	"HCD"	"MS2"	"0"	"180.8"	"100.000"	"84.9175"	"29440"	"29440"	"29426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"256.6"	"3.5"	"243.1"	""	"258.3"	""	"289.2"	""	"309.6"	"353.0"	""	"1021"	"74"	"37.000"	"30.000"	"1.90983455312884E-06"	""	"0"	"1.48E-06"	"1.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSADILTEIGR"	"[R].eSSADILTEIGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"3"	"3"	"0.5957"	"0.0000"	"1"	"1"	"1"	"507.27689"	"1519.81610"	"1519.81652"	"-0.27"	"-0.00014"	"13/104"	"13"	"104"	"1699710.21282959"	"HCD"	"MS2"	"31.41891"	"19.2"	"100.000"	"84.8760"	"29425"	"29425"	"29411"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.8"	""	"29.8"	""	"26.7"	""	"28.3"	""	"37.0"	"35.5"	""	"1021"	"47"	"37.000"	"30.000"	"0.00100692180678663"	""	"0"	"4.204E-05"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSADILTEIGR"	"[R].eSSADILTEIGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"760.41205"	"1519.81682"	"1519.81652"	"0.20"	"0.00015"	"11/104"	"11"	"104"	"806444.948181152"	"HCD"	"MS2"	"0"	"39.5"	"100.000"	"85.2022"	"29554"	"29554"	"29547"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.6"	""	"52.7"	""	"61.1"	""	"61.6"	"0.5"	"69.2"	"69.8"	""	"1016"	"64"	"37.000"	"30.000"	"2.17201946165006E-05"	"30"	"0"	"2.292E-06"	"1.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSADILTEIGR"	"[R].eSSADILTEIGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"760.41278"	"1519.81828"	"1519.81652"	"1.16"	"0.00088"	"12/104"	"12"	"104"	"190625.734069824"	"HCD"	"MS2"	"0"	"11.2"	"100.000"	"84.6256"	"29324"	"29324"	"29308"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.1"	""	"11.4"	""	"18.8"	""	"20.6"	""	"19.1"	"19.0"	""	"1037"	"42"	"37.000"	"30.000"	"0.00354608189115421"	"30"	"0"	"0.001942"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVTDDLEK"	"[R].lEVTDDLEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20650"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1"	"P20650"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1"	"0"	"2"	"2"	"0.5476"	"0.0000"	"1"	"1"	"1"	"760.43506"	"1519.86284"	"1519.86196"	"0.58"	"0.00044"	"8/76"	"8"	"76"	"266816.890686035"	"HCD"	"MS2"	"20.01233"	"22.9"	"100.000"	"79.6497"	"27343"	"27343"	"27324"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.6"	""	"22.5"	""	"22.5"	""	"38.5"	""	"55.2"	"50.8"	""	"1014"	"42"	"37.000"	"30.000"	"0.00314056625063928"	""	"0"	"0.0008322"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVTDDLEK"	"[R].lEVTDDLEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20650"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1"	"P20650"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"760.43555"	"1519.86382"	"1519.86196"	"1.22"	"0.00093"	"8/76"	"8"	"76"	"157782.397033691"	"HCD"	"MS2"	"0"	"15.9"	"100.000"	"79.6101"	"27323"	"27323"	"27300"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.3"	""	"18.7"	""	"18.1"	""	"36.4"	""	"31.5"	"32.2"	""	"1020"	"17"	"37.000"	"30.000"	"1.04850420395191"	"24"	"0.007686"	"0.09488"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STQGAEEVLK"	"[R].sTQGAEEVLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.3725"	"0.0000"	"1"	"1"	"1"	"760.43988"	"1519.87248"	"1519.87319"	"-0.47"	"-0.00035"	"9/98"	"9"	"98"	"573579.065368652"	"HCD"	"MS2"	"3.798516"	"51.0"	"100.000"	"51.3451"	"15874"	"15874"	"15854"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"69.5"	""	"60.8"	""	"76.9"	""	"68.8"	""	"109.8"	"101.9"	""	"896"	"51"	"36.000"	"29.000"	"0.000327550309400571"	""	"0"	"1.876E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STQGAEEVLK"	"[R].sTQGAEEVLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"760.43994"	"1519.87261"	"1519.87319"	"-0.39"	"-0.00029"	"9/98"	"9"	"98"	"1142411.84576416"	"HCD"	"MS2"	"5.511009"	"88.7"	"100.000"	"50.7458"	"15641"	"15641"	"15620"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"145.5"	""	"121.8"	""	"135.5"	""	"105.2"	""	"156.3"	"175.6"	""	"891"	"65"	"36.000"	"29.000"	"1.35471427893878E-05"	""	"0"	"9.327E-06"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STQGAEEVLK"	"[R].sTQGAEEVLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"507.29572"	"1519.87259"	"1519.87319"	"-0.40"	"-0.00020"	"7/98"	"7"	"98"	"2043435.91192627"	"HCD"	"MS2"	"49.70827"	"57.4"	"100.000"	"50.8033"	"15665"	"15665"	"15636"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.0"	""	"78.0"	""	"77.0"	""	"82.7"	""	"101.1"	"114.5"	""	"891"	"32"	"36.000"	"29.000"	"0.0304682638863877"	""	"0"	"0.0007803"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STQGAEEVLK"	"[R].sTQGAEEVLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.3667"	"0.0000"	"1"	"1"	"1"	"507.29581"	"1519.87287"	"1519.87319"	"-0.21"	"-0.00011"	"7/98"	"7"	"98"	"2004769.75213623"	"HCD"	"MS2"	"48.06443"	"54.5"	"100.000"	"51.2138"	"15821"	"15821"	"15794"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"79.2"	""	"71.8"	""	"76.4"	""	"73.2"	""	"99.6"	"117.0"	""	"939"	"30"	"36.000"	"29.000"	"0.0501921265795038"	""	"0"	"0.0004723"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STQGAEEVLK"	"[R].sTQGAEEVLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"760.44067"	"1519.87407"	"1519.87319"	"0.58"	"0.00044"	"9/98"	"9"	"98"	"387099.37097168"	"HCD"	"MS2"	"8.06922"	"38.1"	"100.000"	"51.0404"	"15761"	"15761"	"15739"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.8"	""	"46.9"	""	"57.6"	""	"51.4"	""	"77.3"	"77.9"	""	"906"	"46"	"36.000"	"29.000"	"0.00127086143799213"	""	"0"	"8.673E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STQGAEEVLK"	"[R].sTQGAEEVLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4921"	"0.0000"	"1"	"1"	"1"	"760.44202"	"1519.87676"	"1519.87319"	"2.34"	"0.00178"	"9/98"	"9"	"98"	"879794.197814941"	"HCD"	"MS2"	"0"	"71.8"	"100.000"	"51.0549"	"15756"	"15756"	"15730"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"105.5"	""	"102.6"	""	"106.0"	""	"100.7"	""	"117.9"	"148.7"	""	"895"	"63"	"36.000"	"29.000"	"2.48767155128506E-05"	""	"0"	"2.504E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVEDEETWIR"	"[R].dVEDEETWIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6735"	"0.0000"	"1"	"1"	"1"	"760.87250"	"1520.73772"	"1520.74302"	"-3.49"	"-0.00265"	"8/84"	"8"	"84"	"297662.14630127"	"HCD"	"MS2"	"0"	"21.1"	"100.000"	"73.8639"	"25002"	"25002"	"24978"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.8"	""	"21.5"	""	"19.4"	""	"36.4"	"0.8"	"47.2"	"48.0"	""	"548"	"49"	"34.000"	"27.000"	"0.000345740744477843"	""	"0"	"0.0002389"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVEDEETWIR"	"[R].dVEDEETWIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.5814"	"0.0000"	"1"	"1"	"1"	"760.87274"	"1520.73821"	"1520.74302"	"-3.16"	"-0.00241"	"7/84"	"7"	"84"	"322034.848999023"	"HCD"	"MS2"	"0"	"20.7"	"100.000"	"73.7288"	"24960"	"24960"	"24939"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.3"	""	"24.3"	""	"22.8"	""	"29.2"	""	"41.9"	"52.6"	""	"535"	"43"	"34.000"	"27.000"	"0.00127445288970449"	""	"0"	"6.892E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGGLAAGEDNGQR"	"[K].fGGLAAGEDNGQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQR2"	"Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus norvegicus OX=10116 GN=Agps PE=2 SV=1"	"Q9EQR2"	"Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus norvegicus OX=10116 GN=Agps PE=2 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"760.88513"	"1520.76299"	"1520.76549"	"-1.64"	"-0.00125"	"7/104"	"7"	"104"	"226830.475952148"	"HCD"	"MS2"	"0"	"16.5"	"100.000"	"53.0294"	"16562"	"16562"	"16533"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.0"	""	"22.6"	""	"17.1"	""	"22.1"	""	"37.2"	"29.7"	""	"693"	"26"	"35.000"	"28.000"	"0.0793785641684034"	"20"	"0.0003538"	"0.006932"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLSIYDGPEQR"	"[R].nLSIYDGPEQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"0"	"2"	"2"	"0.5918"	"0.0000"	"1"	"1"	"1"	"760.89722"	"1520.78716"	"1520.79064"	"-2.29"	"-0.00174"	"8/112"	"8"	"112"	"1862200.41467285"	"HCD"	"MS2"	"0"	"91.6"	"100.000"	"59.5251"	"19220"	"19220"	"19206"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"133.1"	""	"123.7"	""	"130.8"	""	"142.3"	""	"167.1"	"171.5"	""	"883"	"49"	"36.000"	"29.000"	"0.000544415783870562"	""	"0"	"0.0001599"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLSIYDGPEQR"	"[R].nLSIYDGPEQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"0"	"2"	"2"	"0.6042"	"0.0000"	"1"	"1"	"1"	"760.89807"	"1520.78887"	"1520.79064"	"-1.16"	"-0.00089"	"8/112"	"8"	"112"	"1846838.54241943"	"HCD"	"MS2"	"0"	"84.5"	"100.000"	"59.7367"	"19292"	"19292"	"19270"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"128.8"	""	"116.5"	""	"116.9"	""	"133.2"	"3.3"	"148.8"	"152.5"	""	"909"	"48"	"36.000"	"29.000"	"0.000780789361963123"	""	"0"	"0.0001343"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPGATAGGAEK"	"[R].mGPGATAGGAEk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"760.90961"	"1520.81194"	"1520.81430"	"-1.55"	"-0.00118"	"10/98"	"10"	"98"	"667510.297424316"	"HCD"	"MS2"	"0"	"47.3"	"100.000"	"29.0384"	"6827"	"6827"	"6800"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.0"	""	"68.5"	""	"67.9"	""	"119.1"	""	"78.2"	"62.5"	""	"1003"	"50"	"37.000"	"30.000"	"0.000556251169854095"	"24"	"0.0008629"	"0.009635"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPGATAGGAEK"	"[R].mGPGATAGGAEk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"760.90997"	"1520.81267"	"1520.81430"	"-1.07"	"-0.00081"	"7/98"	"7"	"98"	"393310.998962402"	"HCD"	"MS2"	"0"	"27.0"	"100.000"	"29.4754"	"6992"	"6992"	"6975"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.3"	""	"32.6"	""	"41.3"	""	"62.3"	""	"48.8"	"45.3"	""	"996"	"44"	"36.000"	"29.000"	"0.00203811808545546"	"20"	"0.0002479"	"0.005933"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPGATAGGAEK"	"[R].mGPGATAGGAEk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.9322"	"0.0000"	"1"	"1"	"1"	"760.91071"	"1520.81413"	"1520.81430"	"-0.11"	"-0.00008"	"11/98"	"11"	"98"	"1229068.56573486"	"HCD"	"MS2"	"0"	"79.7"	"100.000"	"29.3487"	"6953"	"6953"	"6940"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"92.6"	""	"84.3"	""	"121.9"	""	"193.6"	"0.5"	"140.1"	"121.5"	""	"1010"	"59"	"37.000"	"30.000"	"6.07143539481793E-05"	"20"	"0"	"0.002126"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPGATAGGAEK"	"[R].mGPGATAGGAEk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.9107"	"0.0000"	"1"	"1"	"1"	"760.91095"	"1520.81462"	"1520.81430"	"0.21"	"0.00016"	"10/98"	"10"	"98"	"1852942.13739014"	"HCD"	"MS2"	"0"	"110.6"	"100.000"	"29.1678"	"6867"	"6867"	"6843"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"144.0"	""	"131.8"	""	"167.0"	""	"281.1"	""	"168.2"	"158.6"	""	"1002"	"56"	"36.000"	"30.000"	"0.000133609619092526"	"21"	"0"	"0.00148"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDDNEETIK"	"[R].vDDNEETIk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"0"	"2"	"2"	"0.8302"	"0.0000"	"1"	"1"	"1"	"760.91302"	"1520.81877"	"1520.82082"	"-1.35"	"-0.00103"	"8/84"	"8"	"84"	"659391.287414551"	"HCD"	"MS2"	"0"	"64.3"	"100.000"	"47.2479"	"14216"	"14216"	"14190"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"117.1"	""	"75.5"	""	"76.9"	""	"107.9"	"0.4"	"107.5"	"123.4"	""	"1024"	"53"	"37.000"	"30.000"	"0.000285279103453148"	"25"	"0"	"0.0002794"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDDNEETIK"	"[R].vDDNEETIk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"760.91492"	"1520.82256"	"1520.82082"	"1.14"	"0.00087"	"8/84"	"8"	"84"	"527101.954589844"	"HCD"	"MS2"	"0"	"52.0"	"100.000"	"47.4842"	"14301"	"14301"	"14273"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.8"	""	"63.6"	""	"56.4"	""	"94.1"	""	"92.6"	"99.4"	""	"1041"	"53"	"37.000"	"30.000"	"0.000292698659761577"	"26"	"0"	"0.000212"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDEESVVGK"	"[K].sLDEESVVGk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P58195"	"Phospholipid scramblase 1 OS=Rattus norvegicus OX=10116 GN=Plscr1 PE=1 SV=1"	"P58195"	"Phospholipid scramblase 1 OS=Rattus norvegicus OX=10116 GN=Plscr1 PE=1 SV=1"	"0"	"3"	"3"	"0.6857"	"0.0000"	"1"	"1"	"1"	"507.62338"	"1520.85559"	"1520.85721"	"-1.06"	"-0.00054"	"7/82"	"7"	"82"	"1121164.45507813"	"HCD"	"MS2"	"16.94169"	"40.8"	"100.000"	"63.9180"	"20970"	"20970"	"20948"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.6"	""	"50.8"	""	"56.5"	""	"60.9"	""	"87.8"	"79.0"	""	"988"	"35"	"36.000"	"29.000"	"0.0162452705652736"	"25"	"0"	"0.001466"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDEESVVGK"	"[K].sLDEESVVGk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P58195"	"Phospholipid scramblase 1 OS=Rattus norvegicus OX=10116 GN=Plscr1 PE=1 SV=1"	"P58195"	"Phospholipid scramblase 1 OS=Rattus norvegicus OX=10116 GN=Plscr1 PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"760.93158"	"1520.85588"	"1520.85721"	"-0.87"	"-0.00066"	"9/82"	"9"	"82"	"737711.093139648"	"HCD"	"MS2"	"0"	"63.6"	"100.000"	"63.8904"	"20959"	"20959"	"20933"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.3"	""	"80.9"	""	"79.0"	""	"107.5"	"0.2"	"136.1"	"118.6"	""	"983"	"70"	"36.000"	"29.000"	"4.81419327828376E-06"	""	"0"	"4.74E-06"	"0.973"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDEESVVGK"	"[K].sLDEESVVGk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P58195"	"Phospholipid scramblase 1 OS=Rattus norvegicus OX=10116 GN=Plscr1 PE=1 SV=1"	"P58195"	"Phospholipid scramblase 1 OS=Rattus norvegicus OX=10116 GN=Plscr1 PE=1 SV=1"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"507.62366"	"1520.85642"	"1520.85721"	"-0.52"	"-0.00026"	"12/82"	"12"	"82"	"1198380.34161377"	"HCD"	"MS2"	"8.722984"	"40.6"	"100.000"	"64.0418"	"21006"	"21006"	"20983"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.2"	""	"54.7"	""	"50.2"	""	"67.6"	"1.2"	"80.8"	"75.5"	""	"978"	"34"	"36.000"	"29.000"	"0.018893345177944"	"21"	"0"	"0.001702"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDEESVVGK"	"[K].sLDEESVVGk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P58195"	"Phospholipid scramblase 1 OS=Rattus norvegicus OX=10116 GN=Plscr1 PE=1 SV=1"	"P58195"	"Phospholipid scramblase 1 OS=Rattus norvegicus OX=10116 GN=Plscr1 PE=1 SV=1"	"0"	"2"	"2"	"0.8448"	"0.0000"	"1"	"1"	"1"	"760.93225"	"1520.85723"	"1520.85721"	"0.01"	"0.00001"	"15/82"	"15"	"82"	"794021.220703125"	"HCD"	"MS2"	"0"	"67.6"	"100.000"	"63.9981"	"20988"	"20988"	"20967"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"94.9"	""	"93.4"	""	"82.3"	""	"116.0"	""	"131.8"	"126.8"	""	"1024"	"58"	"37.000"	"30.000"	"8.32280962944248E-05"	"25"	"0"	"1.054E-05"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMASAMK"	"[R].yDDmASAmk.[A]"	"N-Term(TMT6plex); M4(Oxidation); M8(Oxidation); K9(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"761.36938"	"1521.73149"	"1521.73294"	"-0.95"	"-0.00072"	"7/72"	"7"	"72"	"282317.60736084"	"HCD"	"MS2"	"39.10942"	"19.8"	"100.000"	"35.4511"	"9424"	"9424"	"9395"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.7"	""	"18.7"	""	"19.6"	""	"43.5"	""	"45.3"	"38.7"	""	"491"	"18"	"33.000"	"26.000"	"0.379359964906681"	"14"	"0.009417"	"0.1228"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEEVVIAGMSGK"	"[-].mEEVVIAGMSGk.[L]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"761.39539"	"1521.78349"	"1521.78542"	"-1.26"	"-0.00096"	"11/104"	"11"	"104"	"165454.004638672"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"110.8479"	"38641"	"38641"	"38635"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.1"	""	"6.1"	""	"6.4"	""	"3.0"	""	"6.6"	"12.0"	""	"918"	"41"	"36.000"	"29.000"	"0.00374811308453593"	"15"	"0"	"0.0001318"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEEVVIAGMSGK"	"[-].mEEVVIAGMSGk.[L]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.9400"	"0.0000"	"1"	"1"	"1"	"761.39557"	"1521.78386"	"1521.78542"	"-1.02"	"-0.00078"	"11/104"	"11"	"104"	"114036.415771484"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"110.8879"	"38530"	"38530"	"38527"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.3"	""	"6.3"	""	"5.9"	""	"3.7"	""	"4.4"	"5.7"	""	"919"	"50"	"36.000"	"29.000"	"0.000482264745965742"	"19"	"0"	"0.0003285"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTGLVDEAIDTK"	"[K].MTGLVDEAIDTk.[S]"	"K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"761.40558"	"1521.80388"	"1521.80318"	"0.46"	"0.00035"	"5/106"	"5"	"106"	"138362.054748535"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"74.9036"	"25419"	"25419"	"25397"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.2"	""	"9.1"	""	"9.4"	""	"16.7"	""	"18.8"	"17.5"	""	"995"	"32"	"36.000"	"29.000"	"0.0340246044522511"	"29"	"0.001886"	"0.02174"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEGISTSDIITR"	"[R].tEGISTSDIITR.[I]"	"N-Term(TMT6plex)"	"1"	"2"	"P19836"	"Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus OX=10116 GN=Pcyt1a PE=1 SV=2"	"P19836; Q9QZC4"	"Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus OX=10116 GN=Pcyt1a PE=1 SV=2; Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus OX=10116 GN=Pcyt1b PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"761.41895"	"1521.83061"	"1521.83217"	"-1.02"	"-0.00078"	"8/108"	"8"	"108"	"367251.820800781"	"HCD"	"MS2"	"7.504877"	"22.4"	"100.000"	"64.6166"	"21254"	"21254"	"21231"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.5"	""	"28.7"	""	"29.7"	""	"41.7"	"1.0"	"39.9"	"45.3"	""	"1012"	"54"	"37.000"	"30.000"	"0.000211909543949667"	"24"	"0"	"0.0004092"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEGISTSDIITR"	"[R].tEGISTSDIITR.[I]"	"N-Term(TMT6plex)"	"1"	"2"	"P19836"	"Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus OX=10116 GN=Pcyt1a PE=1 SV=2"	"P19836; Q9QZC4"	"Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus OX=10116 GN=Pcyt1a PE=1 SV=2; Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus OX=10116 GN=Pcyt1b PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"761.42017"	"1521.83306"	"1521.83217"	"0.58"	"0.00044"	"8/108"	"8"	"108"	"341371.707519531"	"HCD"	"MS2"	"0"	"21.8"	"100.000"	"64.7238"	"21279"	"21279"	"21255"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.4"	""	"25.8"	""	"26.7"	""	"37.5"	""	"45.4"	"43.4"	""	"1000"	"40"	"36.000"	"30.000"	"0.00483025439494907"	"25"	"0"	"0.0007974"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDQSLTEAAK"	"[K].tDQSLTEAAk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"507.95520"	"1521.85105"	"1521.85246"	"-0.93"	"-0.00047"	"11/98"	"11"	"98"	"1549066.9831543"	"HCD"	"MS2"	"50.21148"	"55.1"	"100.000"	"45.5534"	"13515"	"13515"	"13491"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.6"	""	"57.6"	""	"67.8"	""	"98.0"	"0.2"	"101.8"	"108.9"	""	"939"	"36"	"36.000"	"29.000"	"0.0122358909172448"	"25"	"0"	"0.002132"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDQSLTEAAK"	"[K].tDQSLTEAAk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"761.42920"	"1521.85112"	"1521.85246"	"-0.88"	"-0.00067"	"8/98"	"8"	"98"	"640634.762207031"	"HCD"	"MS2"	"100"	"57.2"	"100.000"	"45.3141"	"13429"	"13429"	"13399"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.2"	""	"70.5"	""	"74.9"	""	"84.7"	""	"112.2"	"108.0"	""	"939"	"25"	"36.000"	"29.000"	"0.1395197201901"	"17"	"0"	"0.0005929"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDQSLTEAAK"	"[K].tDQSLTEAAk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"3"	"3"	"0.5588"	"0.0000"	"1"	"1"	"1"	"507.95523"	"1521.85114"	"1521.85246"	"-0.87"	"-0.00044"	"12/98"	"12"	"98"	"977465.923400879"	"HCD"	"MS2"	"25.97401"	"38.9"	"100.000"	"45.6041"	"13547"	"13547"	"13518"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.0"	""	"48.8"	""	"53.8"	""	"69.4"	"1.5"	"70.0"	"73.4"	""	"939"	"34"	"36.000"	"29.000"	"0.0180150551758625"	""	"0.0001301"	"0.004383"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDQSLTEAAK"	"[K].tDQSLTEAAk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"761.42938"	"1521.85149"	"1521.85246"	"-0.64"	"-0.00049"	"16/98"	"16"	"98"	"666626.73840332"	"HCD"	"MS2"	"100"	"58.1"	"100.000"	"45.4868"	"13488"	"13488"	"13463"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.8"	""	"67.7"	""	"72.0"	""	"93.7"	""	"116.9"	"113.2"	""	"931"	"32"	"36.000"	"29.000"	"0.0314716625044968"	"17"	"0"	"0.000247"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGSSIGAIDSK"	"[R].eGSSIGAIDSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"761.42938"	"1521.85149"	"1521.85246"	"-0.64"	"-0.00049"	"10/98"	"10"	"98"	"2496710.77288818"	"HCD"	"MS2"	"9.383914"	"198.1"	"100.000"	"53.3855"	"16718"	"16718"	"16700"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"425.0"	""	"269.5"	""	"282.8"	""	"261.5"	""	"300.3"	"333.6"	""	"931"	"62"	"36.000"	"29.000"	"2.78560597500579E-05"	"23"	"0"	"7.149E-06"	"0.934"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDQSLTEAAK"	"[K].tDQSLTEAAk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"761.42969"	"1521.85210"	"1521.85246"	"-0.24"	"-0.00018"	"18/98"	"18"	"98"	"366582.37121582"	"HCD"	"MS2"	"5.111334"	"34.4"	"100.000"	"45.8273"	"13626"	"13626"	"13597"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.4"	""	"37.0"	""	"38.4"	""	"54.7"	"0.9"	"68.8"	"62.8"	""	"954"	"74"	"36.000"	"29.000"	"1.99764530561247E-06"	""	"0"	"2.321E-06"	"1.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDQSLTEAAK"	"[K].tDQSLTEAAk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.8310"	"0.0000"	"1"	"1"	"1"	"761.42993"	"1521.85259"	"1521.85246"	"0.08"	"0.00006"	"18/98"	"18"	"98"	"489784.99407959"	"HCD"	"MS2"	"0"	"45.9"	"100.000"	"45.6409"	"13562"	"13562"	"13534"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.8"	""	"53.7"	""	"53.5"	""	"63.9"	""	"93.7"	"96.3"	""	"950"	"71"	"36.000"	"29.000"	"3.62821997199403E-06"	"29"	"0"	"8.963E-06"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGSSIGAIDSK"	"[R].eGSSIGAIDSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"761.42993"	"1521.85259"	"1521.85246"	"0.08"	"0.00006"	"9/98"	"9"	"98"	"2661557.40130615"	"HCD"	"MS2"	"14.43784"	"212.3"	"100.000"	"53.6258"	"16805"	"16805"	"16785"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"456.1"	""	"272.1"	""	"306.2"	""	"285.6"	""	"334.2"	"354.1"	""	"950"	"68"	"36.000"	"29.000"	"7.65056676709677E-06"	"24"	"0"	"5.015E-06"	"0.968"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGSSIGAIDSK"	"[R].eGSSIGAIDSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"761.43030"	"1521.85332"	"1521.85246"	"0.57"	"0.00043"	"8/98"	"8"	"98"	"344194.703613281"	"HCD"	"MS2"	"11.27875"	"31.6"	"100.000"	"53.9545"	"16940"	"16940"	"16912"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.8"	""	"51.5"	""	"46.2"	""	"53.5"	""	"52.9"	"41.7"	""	"929"	"25"	"36.000"	"29.000"	"0.14387512644861"	"20"	"0.000936"	"0.01246"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPGNTDPPVVIR"	"[K].qPGNTDPPVVIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"761.43243"	"1521.85759"	"1521.85866"	"-0.70"	"-0.00053"	"6/112"	"6"	"112"	"295297.087890625"	"HCD"	"MS2"	"0"	"18.1"	"100.000"	"51.8725"	"16090"	"16090"	"16059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.6"	""	"20.8"	""	"25.4"	""	"27.9"	""	"37.4"	"38.4"	""	"969"	"12"	"36.000"	"29.000"	"3.14263383054121"	"14"	"0.00736"	"0.08557"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIAWTEDSK"	"[K].dIAWTEDSk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"761.91064"	"1522.81401"	"1522.81534"	"-0.87"	"-0.00067"	"7/78"	"7"	"78"	"335531.510986328"	"HCD"	"MS2"	"18.05049"	"28.8"	"100.000"	"70.2106"	"23514"	"23514"	"23493"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.2"	""	"21.7"	""	"17.5"	""	"59.4"	""	"87.2"	"62.5"	""	"1020"	"25"	"37.000"	"30.000"	"0.15330989143404"	"19"	"0.0008629"	"0.01072"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIAWTEDSK"	"[K].dIAWTEDSk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"761.91077"	"1522.81426"	"1522.81534"	"-0.71"	"-0.00054"	"8/78"	"8"	"78"	"340087.998474121"	"HCD"	"MS2"	"28.57337"	"29.1"	"100.000"	"70.0405"	"23459"	"23459"	"23437"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.2"	""	"21.8"	""	"21.7"	""	"61.4"	"0.2"	"76.2"	"68.4"	""	"1016"	"41"	"37.000"	"30.000"	"0.00397982258525236"	"25"	"0"	"0.0004549"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTYSTEPNNLK"	"[K].QTYSTEPNNLk.[A]"	"K11(TMT6plex)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"762.39832"	"1523.78935"	"1523.79030"	"-0.62"	"-0.00047"	"6/108"	"6"	"108"	"342503.827941895"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"58.0955"	"18637"	"18637"	"18607"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.2"	""	"21.0"	""	"23.6"	""	"24.6"	""	"31.0"	"32.0"	""	"867"	"44"	"36.000"	"29.000"	"0.00183649225782476"	"22"	"0.004942"	"0.05272"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNGVNYASVTR"	"[R].nVnGVNYASVTR.[N]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.4127"	"0.0000"	"1"	"1"	"1"	"762.40369"	"1523.80010"	"1523.80154"	"-0.95"	"-0.00072"	"11/114"	"11"	"114"	"1342717.2300415"	"HCD"	"MS2"	"0"	"74.1"	"100.000"	"54.2445"	"17058"	"17058"	"17040"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"129.4"	""	"104.3"	""	"115.2"	""	"107.2"	""	"119.8"	"129.3"	""	"939"	"63"	"36.000"	"29.000"	"2.58604213462337E-05"	"19"	"0"	"1.216E-06"	"1.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNGVNYASVTR"	"[R].nVnGVNYASVTR.[N]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.3833"	"0.0000"	"1"	"1"	"1"	"762.40411"	"1523.80095"	"1523.80154"	"-0.38"	"-0.00029"	"11/114"	"11"	"114"	"1571143.67041016"	"HCD"	"MS2"	"8.898"	"74.0"	"100.000"	"52.3982"	"16315"	"16315"	"16299"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"130.2"	""	"115.9"	""	"115.7"	""	"94.9"	"12.5"	"118.7"	"111.7"	""	"939"	"60"	"36.000"	"29.000"	"4.84881480004976E-05"	"21"	"0"	"2.46E-06"	"1.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNGVNYASVTR"	"[R].nVnGVNYASVTR.[N]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.2540"	"0.0000"	"1"	"1"	"1"	"762.40417"	"1523.80107"	"1523.80154"	"-0.30"	"-0.00023"	"11/114"	"11"	"114"	"641976.453918457"	"HCD"	"MS2"	"22.21161"	"34.9"	"100.000"	"52.1129"	"16199"	"16199"	"16173"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.5"	""	"47.1"	""	"52.7"	""	"49.5"	"1.2"	"66.9"	"59.2"	""	"939"	"63"	"36.000"	"29.000"	"2.52136428395833E-05"	"21"	"0"	"2.675E-06"	"1.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNGVNYASVTR"	"[R].nVnGVNYASVTR.[N]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.2745"	"0.0000"	"1"	"1"	"1"	"762.40430"	"1523.80132"	"1523.80154"	"-0.14"	"-0.00011"	"10/114"	"10"	"114"	"633440.200744629"	"HCD"	"MS2"	"2.753766"	"36.8"	"100.000"	"52.7857"	"16462"	"16462"	"16439"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.5"	""	"62.2"	""	"53.8"	""	"51.6"	"6.3"	"55.7"	"59.1"	""	"948"	"51"	"36.000"	"29.000"	"0.000351381054376635"	"19"	"0"	"6.943E-05"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNGVNYASVTR"	"[R].nVnGVNYASVTR.[N]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.2909"	"0.0000"	"1"	"1"	"1"	"762.40430"	"1523.80132"	"1523.80154"	"-0.14"	"-0.00011"	"8/114"	"8"	"114"	"945549.552185059"	"HCD"	"MS2"	"0"	"53.5"	"100.000"	"54.0922"	"17007"	"17007"	"16987"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.9"	""	"71.7"	""	"82.5"	""	"80.4"	""	"96.2"	"90.9"	""	"948"	"55"	"36.000"	"29.000"	"0.000151278894331776"	"28"	"0"	"1.706E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNGVNYASVTR"	"[R].nVnGVNYASVTR.[N]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"762.40442"	"1523.80156"	"1523.80154"	"0.02"	"0.00001"	"9/114"	"9"	"114"	"1004069.4831543"	"HCD"	"MS2"	"22.70999"	"49.0"	"100.000"	"52.4542"	"16327"	"16327"	"16300"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"85.8"	""	"75.0"	""	"73.2"	""	"69.9"	"4.2"	"83.5"	"71.4"	""	"946"	"57"	"36.000"	"29.000"	"0.000100660976874982"	"20"	"0"	"1.799E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLNTGDNVHIVR"	"[K].gLNTGDNVHIVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P27435"	"Tryptase OS=Rattus norvegicus OX=10116 GN=Tpsab1 PE=1 SV=2"	"P27435"	"Tryptase OS=Rattus norvegicus OX=10116 GN=Tpsab1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"508.62082"	"1523.84790"	"1523.84916"	"-0.82"	"-0.00042"	"9/110"	"9"	"110"	"4485651.56811523"	"HCD"	"MS2"	"27.89818"	"91.5"	"100.000"	"42.0359"	"12098"	"12098"	"12076"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"122.6"	""	"102.5"	""	"128.3"	""	"133.9"	""	"178.5"	"204.6"	""	"952"	"74"	"36.000"	"29.000"	"2.10187532940177E-06"	"17"	"0"	"8.807E-06"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLNTGDNVHIVR"	"[K].gLNTGDNVHIVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P27435"	"Tryptase OS=Rattus norvegicus OX=10116 GN=Tpsab1 PE=1 SV=2"	"P27435"	"Tryptase OS=Rattus norvegicus OX=10116 GN=Tpsab1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"508.62094"	"1523.84827"	"1523.84916"	"-0.58"	"-0.00029"	"8/110"	"8"	"110"	"4827222.50518799"	"HCD"	"MS2"	"36.44884"	"101.0"	"100.000"	"42.1559"	"12137"	"12137"	"12113"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"157.9"	""	"114.1"	""	"137.4"	""	"146.0"	"0.4"	"199.9"	"202.3"	""	"940"	"59"	"36.000"	"29.000"	"5.62468049714404E-05"	"16"	"0"	"2.88E-06"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STFDAHIYEGR"	"[K].sTFDAHIYEGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"508.92581"	"1524.76288"	"1524.76442"	"-1.01"	"-0.00051"	"9/96"	"9"	"96"	"3386537.71514893"	"HCD"	"MS2"	"34.29086"	"66.0"	"100.000"	"51.3474"	"15875"	"15875"	"15854"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.8"	""	"74.7"	""	"95.3"	""	"108.3"	"0.1"	"126.8"	"140.2"	""	"777"	"44"	"35.000"	"28.000"	"0.00139441171609585"	"15"	"0"	"8.663E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STFDAHIYEGR"	"[K].sTFDAHIYEGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"0"	"3"	"3"	"0.9792"	"0.0000"	"1"	"1"	"1"	"508.92599"	"1524.76343"	"1524.76442"	"-0.65"	"-0.00033"	"8/96"	"8"	"96"	"3248940.89086914"	"HCD"	"MS2"	"30.78272"	"63.8"	"100.000"	"50.9970"	"15743"	"15743"	"15726"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"86.4"	""	"84.0"	""	"83.4"	""	"112.0"	""	"117.7"	"122.1"	""	"773"	"48"	"35.000"	"28.000"	"0.000602767042342618"	"16"	"0"	"9.145E-05"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNADTDGMVK"	"[K].tNADTDGmVk.[I]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"763.39905"	"1525.79082"	"1525.79323"	"-1.58"	"-0.00121"	"13/98"	"13"	"98"	"348135.340454102"	"HCD"	"MS2"	"0"	"25.3"	"100.000"	"31.2429"	"7709"	"7709"	"7679"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.4"	""	"23.9"	""	"23.9"	""	"67.6"	"0.5"	"43.1"	"43.7"	""	"870"	"39"	"36.000"	"29.000"	"0.00507562183421519"	"22"	"0"	"0.003556"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNADTDGMVK"	"[K].tNADTDGmVk.[I]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"763.39935"	"1525.79143"	"1525.79323"	"-1.18"	"-0.00090"	"8/98"	"8"	"98"	"333246.161743164"	"HCD"	"MS2"	"0"	"26.1"	"100.000"	"31.1850"	"7695"	"7695"	"7673"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.5"	""	"23.0"	""	"26.6"	""	"63.5"	"3.3"	"48.5"	"42.8"	""	"860"	"27"	"36.000"	"29.000"	"0.0881999736894994"	"20"	"0.004022"	"0.04343"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQLNDSAK"	"[R].eYQLNDSAk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P59215"	"Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"P59215"	"Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"763.41650"	"1525.82573"	"1525.82624"	"-0.34"	"-0.00026"	"10/88"	"10"	"88"	"421300.359313965"	"HCD"	"MS2"	"12.82672"	"38.7"	"100.000"	"48.7384"	"14824"	"14824"	"14799"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.3"	""	"41.9"	""	"41.2"	""	"63.6"	"0.3"	"88.2"	"82.7"	""	"917"	"22"	"36.000"	"29.000"	"0.29197074633628"	"14"	"0.002056"	"0.0224"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQLNDSAK"	"[R].eYQLNDSAk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P59215"	"Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"P59215"	"Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"763.41669"	"1525.82610"	"1525.82624"	"-0.10"	"-0.00007"	"11/88"	"11"	"88"	"437837.388366699"	"HCD"	"MS2"	"9.00575"	"42.5"	"100.000"	"49.1378"	"14974"	"14974"	"14950"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.8"	""	"46.6"	""	"49.3"	""	"66.7"	""	"96.3"	"87.4"	""	"913"	"29"	"36.000"	"29.000"	"0.0605955569953626"	"14"	"0"	"0.002296"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GETAVPGAPETLR"	"[R].gETAVPGAPETLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"0"	"2"	"2"	"0.9808"	"0.0000"	"1"	"1"	"1"	"763.92139"	"1526.83550"	"1526.83759"	"-1.37"	"-0.00105"	"8/114"	"8"	"114"	"877835.436950684"	"HCD"	"MS2"	"0"	"42.9"	"100.000"	"54.0304"	"16971"	"16971"	"16944"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"70.0"	""	"56.5"	""	"64.3"	""	"67.0"	"2.1"	"73.1"	"72.6"	""	"809"	"52"	"36.000"	"29.000"	"0.000254049606139987"	"17"	"0"	"0.0001453"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GETAVPGAPETLR"	"[R].gETAVPGAPETLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"0"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"763.92212"	"1526.83696"	"1526.83759"	"-0.41"	"-0.00031"	"11/114"	"11"	"114"	"1334734.81756592"	"HCD"	"MS2"	"0"	"64.6"	"100.000"	"53.9059"	"16931"	"16931"	"16907"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.1"	""	"86.7"	""	"91.4"	""	"95.6"	""	"123.7"	"115.3"	""	"803"	"47"	"36.000"	"29.000"	"0.000793753310504912"	"19"	"0"	"0.000221"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTETAEVLLER"	"[K].hTETAEVLLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIE6"	"3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibch PE=1 SV=2"	"Q5XIE6"	"3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibch PE=1 SV=2"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"509.61743"	"1526.83774"	"1526.83759"	"0.10"	"0.00005"	"8/96"	"8"	"96"	"1976589.86810303"	"HCD"	"MS2"	"35.9943"	"36.3"	"100.000"	"46.0092"	"13700"	"13700"	"13677"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.2"	""	"44.2"	""	"53.9"	""	"64.0"	""	"71.7"	"66.3"	""	"787"	"62"	"35.000"	"28.000"	"2.3710719712026E-05"	"21"	"0"	"5.768E-06"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSVDQESLK"	"[K].ySVDQESLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"763.92761"	"1526.84795"	"1526.84664"	"0.85"	"0.00065"	"10/82"	"10"	"82"	"894100.280151367"	"HCD"	"MS2"	"8.482154"	"48.7"	"100.000"	"59.1272"	"19058"	"19058"	"19037"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"86.9"	""	"58.9"	""	"58.1"	""	"65.3"	"1.9"	"98.7"	"91.5"	""	"770"	"10"	"35.000"	"28.000"	"3.56008796966215"	"13"	"0.002937"	"0.02759"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSVDQESLK"	"[K].ySVDQESLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"763.92780"	"1526.84831"	"1526.84664"	"1.09"	"0.00083"	"7/82"	"7"	"82"	"728660.315734863"	"HCD"	"MS2"	"0"	"43.5"	"100.000"	"59.3224"	"19123"	"19123"	"19096"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.4"	""	"51.3"	""	"53.8"	""	"55.0"	""	"91.1"	"88.3"	""	"776"	"12"	"35.000"	"28.000"	"2.3005502593704"	"14"	"0.004022"	"0.04255"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLDFGIDMDSR"	"[K].nLDFGIDmDSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q6MG08"	"ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus OX=10116 GN=Abcf1 PE=1 SV=1"	"Q6MG08"	"ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus OX=10116 GN=Abcf1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"764.36859"	"1527.72991"	"1527.73107"	"-0.76"	"-0.00058"	"8/114"	"8"	"114"	"263177.712097168"	"HCD"	"MS2"	"54.26777"	"14.6"	"100.000"	"77.1093"	"26323"	"26323"	"26301"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.7"	""	"13.9"	""	"17.4"	""	"31.5"	"1.5"	"30.0"	"26.2"	""	"461"	"3"	"33.000"	"26.000"	"10.8810531011258"	"13"	"0.008728"	"0.1121"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGTDLMNEMR"	"[K].sLGTDLmNEmR.[R]"	"N-Term(TMT6plex); M7(Oxidation); M10(Oxidation)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.36932"	"1527.73137"	"1527.73445"	"-2.01"	"-0.00154"	"9/102"	"9"	"102"	"373538.707275391"	"HCD"	"MS2"	"100"	"20.6"	"100.000"	"46.6407"	"13968"	"13968"	"13949"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.1"	""	"24.7"	""	"17.8"	""	"49.8"	""	"45.8"	"42.0"	""	"464"	"32"	"33.000"	"26.000"	"0.0157212829765677"	"14"	"0"	"0.002695"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGTDLMNEMR"	"[K].sLGTDLmNEmR.[R]"	"N-Term(TMT6plex); M7(Oxidation); M10(Oxidation)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.37036"	"1527.73345"	"1527.73445"	"-0.65"	"-0.00050"	"9/102"	"9"	"102"	"368519.013977051"	"HCD"	"MS2"	"0"	"21.9"	"100.000"	"46.8702"	"14050"	"14050"	"14028"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.6"	""	"13.1"	""	"21.5"	""	"55.0"	"1.8"	"45.9"	"49.1"	""	"461"	"49"	"33.000"	"26.000"	"0.000324093954311945"	"16"	"0"	"0.00111"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGTDLMNEMR"	"[K].sLGTDLmNEmR.[R]"	"N-Term(TMT6plex); M7(Oxidation); M10(Oxidation)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.9825"	"0.0000"	"1"	"1"	"1"	"764.37091"	"1527.73454"	"1527.73445"	"0.07"	"0.00005"	"9/102"	"9"	"102"	"433341.31048584"	"HCD"	"MS2"	"23.88513"	"24.4"	"100.000"	"46.2209"	"13787"	"13787"	"13757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.6"	""	"21.8"	""	"30.6"	""	"56.0"	""	"45.8"	"55.5"	""	"477"	"57"	"33.000"	"26.000"	"4.67184454631179E-05"	"17"	"0"	"0.0006135"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGTDLMNEMR"	"[K].sLGTDLmNEmR.[R]"	"N-Term(TMT6plex); M7(Oxidation); M10(Oxidation)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"764.37158"	"1527.73589"	"1527.73445"	"0.94"	"0.00072"	"9/102"	"9"	"102"	"502630.205322266"	"HCD"	"MS2"	"29.15117"	"27.2"	"100.000"	"46.0621"	"13734"	"13734"	"13705"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.5"	""	"29.2"	""	"28.8"	""	"68.0"	"1.3"	"53.3"	"54.6"	""	"484"	"60"	"33.000"	"26.000"	"2.70903967799051E-05"	"18"	"0"	"0.0004914"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSYQDAEDK"	"[K].nSYQDAEDk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"764.38654"	"1527.76579"	"1527.76912"	"-2.18"	"-0.00166"	"7/92"	"7"	"92"	"193351.43572998"	"HCD"	"MS2"	"0"	"20.6"	"100.000"	"34.0828"	"8868"	"8868"	"8839"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.7"	""	"14.6"	""	"14.9"	""	"49.7"	""	"50.2"	"45.3"	""	"655"	"33"	"35.000"	"28.000"	"0.0149696382098872"	"24"	"0.000936"	"0.01229"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9344"	"0.0000"	"1"	"1"	"1"	"764.39905"	"1527.79082"	"1527.79645"	"-3.69"	"-0.00282"	"12/128"	"12"	"128"	"2435884.6708374"	"HCD"	"MS2"	"0"	"94.3"	"100.000"	"54.6063"	"17214"	"17214"	"17193"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"127.8"	""	"110.8"	""	"111.7"	""	"186.2"	""	"186.5"	"177.7"	""	"716"	"61"	"35.000"	"28.000"	"3.13244191531422E-05"	"20"	"0"	"1.515E-06"	"1.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.39923"	"1527.79119"	"1527.79645"	"-3.45"	"-0.00263"	"6/128"	"6"	"128"	"200029.232727051"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"80.0994"	"27520"	"27520"	"27498"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.9"	""	"9.2"	""	"14.8"	""	"23.1"	""	"19.8"	"24.0"	""	"735"	"23"	"35.000"	"28.000"	"0.167979909683467"	"14"	"0.001546"	"0.01938"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"764.39923"	"1527.79119"	"1527.79645"	"-3.45"	"-0.00263"	"6/128"	"6"	"128"	"227179.188537598"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"80.1206"	"27532"	"27532"	"27511"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.5"	""	"13.6"	""	"14.2"	""	"25.5"	"1.1"	"23.7"	"30.6"	""	"735"	"36"	"35.000"	"28.000"	"0.0103099686194725"	"19"	"0.0003538"	"0.00655"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"764.39954"	"1527.79180"	"1527.79645"	"-3.05"	"-0.00233"	"4/128"	"4"	"128"	"114874.621582031"	"HCD"	"MS2"	"12.98962"	"7.4"	"100.000"	"94.3381"	"33055"	"33055"	"33045"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.7"	""	"8.5"	""	"8.8"	""	"17.5"	""	"13.6"	"15.2"	""	"722"	"12"	"35.000"	"28.000"	"2.2777560135735"	"17"	"0.004817"	"0.05055"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"764.39990"	"1527.79253"	"1527.79645"	"-2.57"	"-0.00196"	"4/128"	"4"	"128"	"159548.096923828"	"HCD"	"MS2"	"0"	"13.3"	"100.000"	"56.4967"	"17971"	"17971"	"17943"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.0"	""	"19.4"	""	"16.3"	""	"20.0"	""	"25.0"	"23.8"	""	"741"	"7"	"35.000"	"28.000"	"7.34155763060789"	"13"	"0.006308"	"0.07121"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"764.40002"	"1527.79277"	"1527.79645"	"-2.41"	"-0.00184"	"11/128"	"11"	"128"	"614577.312011719"	"HCD"	"MS2"	"4.386224"	"35.0"	"100.000"	"68.2797"	"22741"	"22741"	"22719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.0"	""	"32.4"	""	"33.4"	""	"71.9"	""	"66.2"	"78.5"	""	"740"	"51"	"35.000"	"28.000"	"0.000296620883453441"	"22"	"0"	"3.912E-05"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"764.40021"	"1527.79314"	"1527.79645"	"-2.17"	"-0.00166"	"11/128"	"11"	"128"	"548960.163208008"	"HCD"	"MS2"	"0"	"30.9"	"100.000"	"68.4448"	"22794"	"22794"	"22773"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.4"	""	"35.2"	""	"37.4"	""	"62.2"	""	"51.6"	"62.1"	""	"735"	"54"	"35.000"	"28.000"	"0.000140364519533717"	"23"	"0"	"3.939E-05"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"764.40033"	"1527.79338"	"1527.79645"	"-2.01"	"-0.00153"	"5/128"	"5"	"128"	"113419.008789063"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"85.5836"	"29698"	"29698"	"29685"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.0"	""	"6.8"	""	"7.1"	""	"12.3"	""	"17.2"	"12.8"	""	"747"	"21"	"35.000"	"28.000"	"0.29396160245112"	"15"	"0.001886"	"0.0213"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40033"	"1527.79338"	"1527.79645"	"-2.01"	"-0.00153"	"10/128"	"10"	"128"	"555599.172729492"	"HCD"	"MS2"	"0"	"30.9"	"100.000"	"66.9962"	"22204"	"22204"	"22179"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.5"	""	"32.7"	""	"31.2"	""	"67.9"	"0.4"	"55.7"	"63.8"	""	"747"	"46"	"35.000"	"28.000"	"0.000921065692457027"	"15"	"0"	"6.146E-05"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"764.40039"	"1527.79350"	"1527.79645"	"-1.93"	"-0.00147"	"7/128"	"7"	"128"	"92642.4855957031"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"91.0681"	"31834"	"31834"	"31810"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.0"	""	"6.6"	""	"7.2"	""	"10.2"	""	"9.4"	"8.8"	""	"748"	"15"	"35.000"	"28.000"	"1.22707639624307"	"15"	"0.0023"	"0.02368"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"764.40039"	"1527.79350"	"1527.79645"	"-1.93"	"-0.00147"	"5/128"	"5"	"128"	"85154.2861938477"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"109.4329"	"38099"	"38099"	"38092"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.6"	""	"2.4"	""	"3.5"	""	"8.5"	""	"6.3"	"8.1"	""	"748"	"11"	"35.000"	"28.000"	"2.87654784667192"	"14"	"0.003717"	"0.03801"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40045"	"1527.79363"	"1527.79645"	"-1.85"	"-0.00141"	"5/128"	"5"	"128"	"139318.170043945"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"85.8070"	"29784"	"29784"	"29768"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.9"	""	"9.6"	""	"12.2"	""	"15.7"	""	"18.2"	"16.7"	""	"752"	"5"	"35.000"	"28.000"	"11.2768510713936"	"13"	"0.006443"	"0.07272"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"764.40045"	"1527.79363"	"1527.79645"	"-1.85"	"-0.00141"	"10/128"	"10"	"128"	"3140877.71612549"	"HCD"	"MS2"	"0"	"112.1"	"100.000"	"54.8724"	"17310"	"17310"	"17296"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"145.7"	""	"127.8"	""	"125.0"	""	"233.6"	""	"221.4"	"211.1"	""	"752"	"68"	"35.000"	"28.000"	"6.19709059213592E-06"	"25"	"0"	"1.333E-07"	"1.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"764.40051"	"1527.79375"	"1527.79645"	"-1.77"	"-0.00135"	"18/128"	"18"	"128"	"345104.207397461"	"HCD"	"MS2"	"0"	"20.6"	"100.000"	"72.4250"	"24417"	"24417"	"24393"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.0"	""	"22.3"	""	"24.4"	""	"42.3"	"1.1"	"44.5"	"41.8"	""	"752"	"48"	"35.000"	"28.000"	"0.000538502650126852"	"20"	"0"	"0.0001211"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40057"	"1527.79387"	"1527.79645"	"-1.69"	"-0.00129"	"6/128"	"6"	"128"	"102220.390197754"	"HCD"	"MS2"	"100"	"6.0"	"100.000"	"91.0737"	"31840"	"31840"	"31822"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.0"	""	"7.2"	""	"5.7"	""	"9.9"	""	"14.3"	"11.0"	""	"752"	"6"	"35.000"	"28.000"	"9.20847778933624"	"13"	"0.001465"	"0.01826"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"764.40057"	"1527.79387"	"1527.79645"	"-1.69"	"-0.00129"	"7/128"	"7"	"128"	"430305.572265625"	"HCD"	"MS2"	"0"	"25.7"	"100.000"	"68.5889"	"22867"	"22867"	"22847"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.3"	""	"25.6"	""	"28.1"	""	"48.0"	"1.4"	"49.0"	"51.1"	""	"752"	"34"	"35.000"	"28.000"	"0.0139697246140537"	"21"	"0.000936"	"0.01264"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"764.40063"	"1527.79399"	"1527.79645"	"-1.61"	"-0.00123"	"5/128"	"5"	"128"	"62031.2738647461"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"107.2111"	"37283"	"37283"	"37277"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.8"	""	"3.0"	""	"5.6"	""	"8.6"	""	"7.8"	"6.6"	""	"752"	"13"	"35.000"	"28.000"	"1.82048810211621"	"14"	"0.003653"	"0.03758"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40070"	"1527.79411"	"1527.79645"	"-1.53"	"-0.00117"	"7/128"	"7"	"128"	"80623.7611694336"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"109.7165"	"38294"	"38294"	"38284"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.6"	""	""	""	"4.7"	""	"7.9"	""	"11.2"	"7.7"	""	"753"	"11"	"35.000"	"28.000"	"3.22674748729234"	"13"	"0.003922"	"0.04008"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40070"	"1527.79411"	"1527.79645"	"-1.53"	"-0.00117"	"5/128"	"5"	"128"	"131221.817810059"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"83.9321"	"29050"	"29050"	"29033"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.3"	""	"8.8"	""	"7.8"	""	"12.8"	""	"15.7"	"15.1"	""	"753"	"22"	"35.000"	"28.000"	"0.248178971559487"	"14"	"0.000936"	"0.01268"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40076"	"1527.79424"	"1527.79645"	"-1.45"	"-0.00111"	"4/128"	"4"	"128"	"76723.6322021484"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"111.2482"	"38626"	"38626"	"38622"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.5"	""	"3.5"	""	"1.7"	""	"8.0"	""	"4.7"	"6.4"	""	"753"	"11"	"35.000"	"28.000"	"2.92930761466486"	"13"	"0.003507"	"0.03642"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"764.40076"	"1527.79424"	"1527.79645"	"-1.45"	"-0.00111"	"6/128"	"6"	"128"	"144393.603393555"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"83.6887"	"28951"	"28951"	"28935"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.9"	""	"5.6"	""	"9.7"	""	"14.6"	""	"15.5"	"18.1"	""	"753"	"31"	"35.000"	"28.000"	"0.0313880966009292"	"17"	"0.0006732"	"0.008362"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40076"	"1527.79424"	"1527.79645"	"-1.45"	"-0.00111"	"5/128"	"5"	"128"	"164707.986816406"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"94.3645"	"33084"	"33084"	"33078"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.6"	""	"7.1"	""	"9.2"	""	"14.5"	""	"17.1"	"15.4"	""	"753"	"9"	"35.000"	"28.000"	"5.00916088368751"	"13"	"0.003922"	"0.04074"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"764.40076"	"1527.79424"	"1527.79645"	"-1.45"	"-0.00111"	"8/128"	"8"	"128"	"343963.285522461"	"HCD"	"MS2"	"12.72873"	"16.4"	"100.000"	"74.5765"	"25291"	"25291"	"25277"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.8"	""	"14.4"	""	"20.0"	""	"28.5"	"1.0"	"34.9"	"33.0"	""	"753"	"32"	"35.000"	"28.000"	"0.0245338090363907"	"19"	"0.0002479"	"0.005081"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNGPENWHK"	"[K].snGPENWHk.[E]"	"N-Term(TMT6plex); N2(Deamidated); K9(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"509.93628"	"1527.79428"	"1527.79561"	"-0.87"	"-0.00044"	"11/86"	"11"	"86"	"3550498.43017578"	"HCD"	"MS2"	"11.99729"	"125.8"	"100.000"	"42.6220"	"12338"	"12338"	"12314"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"227.3"	""	"127.5"	""	"165.6"	""	"232.4"	""	"234.2"	"204.5"	""	"753"	"24"	"35.000"	"28.000"	"0.133895191441223"	"14"	"0"	"0.0009561"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"764.40082"	"1527.79436"	"1527.79645"	"-1.37"	"-0.00105"	"5/128"	"5"	"128"	"104921.030090332"	"HCD"	"MS2"	"10.68113"	"6.9"	"100.000"	"91.3308"	"31933"	"31933"	"31925"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.7"	""	"7.7"	""	"8.3"	""	"12.1"	"1.6"	"12.9"	"12.0"	""	"753"	"15"	"35.000"	"28.000"	"1.21833011834005"	"20"	"0.002973"	"0.0287"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"764.40082"	"1527.79436"	"1527.79645"	"-1.37"	"-0.00105"	"4/128"	"4"	"128"	"73782.1117553711"	"HCD"	"MS2"	"30.45741"	"2.8"	"100.000"	"105.6873"	"36722"	"36722"	"36710"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.2"	""	""	""	"5.7"	""	"6.1"	""	"7.3"	"5.7"	""	"753"	"12"	"35.000"	"28.000"	"2.50475343309956"	"14"	"0.003449"	"0.0336"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40082"	"1527.79436"	"1527.79645"	"-1.37"	"-0.00105"	"6/128"	"6"	"128"	"305205.653259277"	"HCD"	"MS2"	"24.40844"	"18.8"	"100.000"	"75.0245"	"25479"	"25479"	"25462"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.4"	""	"18.5"	""	"23.1"	""	"42.5"	""	"38.6"	"32.6"	""	"753"	"26"	"35.000"	"28.000"	"0.0992578766763256"	"14"	"0.0003538"	"0.006975"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9839"	"0.0000"	"1"	"1"	"1"	"764.40082"	"1527.79436"	"1527.79645"	"-1.37"	"-0.00105"	"10/128"	"10"	"128"	"464278.61541748"	"HCD"	"MS2"	"7.4859"	"25.0"	"100.000"	"67.9752"	"22617"	"22617"	"22594"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.6"	""	"24.3"	""	"30.2"	""	"41.1"	"1.6"	"50.3"	"54.9"	""	"753"	"62"	"35.000"	"28.000"	"2.59875286145851E-05"	"17"	"0"	"9.17E-06"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"509.93634"	"1527.79447"	"1527.79645"	"-1.30"	"-0.00066"	"12/128"	"12"	"128"	"532408.578186035"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"67.5385"	"22425"	"22425"	"22401"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.6"	""	"20.4"	""	"21.1"	""	"29.5"	""	"30.6"	"30.0"	""	"754"	"19"	"35.000"	"28.000"	"0.453253691850765"	"19"	"0.001374"	"0.01689"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40088"	"1527.79448"	"1527.79645"	"-1.29"	"-0.00098"	"6/128"	"6"	"128"	"91990.7233886719"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"107.2781"	"37383"	"37383"	"37363"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.9"	""	"3.7"	""	"6.9"	""	"9.5"	""	"4.3"	"7.8"	""	"754"	"5"	"35.000"	"28.000"	"11.6504137805762"	"13"	"0.005001"	"0.05619"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"764.40088"	"1527.79448"	"1527.79645"	"-1.29"	"-0.00098"	"8/128"	"8"	"128"	"139767.357727051"	"HCD"	"MS2"	"24.939"	"7.8"	"100.000"	"86.2537"	"29964"	"29964"	"29941"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.9"	""	"12.1"	""	"8.9"	""	"15.3"	""	"13.3"	"16.9"	""	"754"	"11"	"35.000"	"28.000"	"3.0502915399025"	"16"	"0.0023"	"0.02289"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"764.40088"	"1527.79448"	"1527.79645"	"-1.29"	"-0.00098"	"8/128"	"8"	"128"	"161843.377807617"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"79.2324"	"27175"	"27175"	"27153"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.8"	""	"11.6"	""	"11.4"	""	"22.1"	""	"20.7"	"13.4"	""	"754"	"26"	"35.000"	"28.000"	"0.0914832005846071"	"18"	"0.002056"	"0.0224"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40088"	"1527.79448"	"1527.79645"	"-1.29"	"-0.00098"	"12/128"	"12"	"128"	"263724.549499512"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"72.4855"	"24455"	"24455"	"24436"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.1"	""	"16.0"	""	"18.7"	""	"30.3"	""	"32.1"	"32.9"	""	"754"	"22"	"35.000"	"28.000"	"0.228739596254866"	"14"	"0.001728"	"0.02018"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"764.40088"	"1527.79448"	"1527.79645"	"-1.29"	"-0.00098"	"10/128"	"10"	"128"	"591186.202087402"	"HCD"	"MS2"	"4.720248"	"31.9"	"100.000"	"66.6147"	"22063"	"22063"	"22045"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.5"	""	"28.8"	""	"41.6"	""	"60.5"	""	"70.9"	"61.6"	""	"754"	"54"	"35.000"	"28.000"	"0.0001608204785882"	"18"	"0"	"9.113E-05"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"764.40094"	"1527.79460"	"1527.79645"	"-1.21"	"-0.00092"	"8/128"	"8"	"128"	"78884.0153808594"	"HCD"	"MS2"	"14.60084"	"5.2"	"100.000"	"90.7440"	"31704"	"31704"	"31694"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.1"	""	"6.9"	""	"7.7"	""	"7.6"	""	"10.0"	"11.9"	""	"751"	"20"	"35.000"	"28.000"	"0.399585703343231"	"17"	"0.001374"	"0.01719"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40094"	"1527.79460"	"1527.79645"	"-1.21"	"-0.00092"	"5/128"	"5"	"128"	"90502.6182250977"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"110.2137"	"38346"	"38346"	"38342"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.9"	""	"2.3"	""	"6.0"	""	"6.1"	""	"5.9"	"4.4"	""	"751"	"18"	"35.000"	"28.000"	"0.534084459564619"	"14"	"0.001812"	"0.02035"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"764.40094"	"1527.79460"	"1527.79645"	"-1.21"	"-0.00092"	"6/128"	"6"	"128"	"121489.692016602"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"89.2148"	"31112"	"31112"	"31097"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.3"	""	"7.1"	""	"9.5"	""	"11.1"	""	"10.4"	"16.4"	""	"751"	"13"	"35.000"	"28.000"	"1.99347108808736"	"15"	"0.003111"	"0.03057"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"764.40100"	"1527.79473"	"1527.79645"	"-1.13"	"-0.00086"	"5/128"	"5"	"128"	"87157.8916625977"	"HCD"	"MS2"	"6.615824"	"5.8"	"100.000"	"88.9157"	"30998"	"30998"	"30983"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.3"	""	"6.7"	""	"6.9"	""	"10.3"	""	"11.0"	"12.1"	""	"749"	"24"	"35.000"	"28.000"	"0.16086139182345"	"16"	"0.000936"	"0.01269"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"764.40100"	"1527.79473"	"1527.79645"	"-1.13"	"-0.00086"	"7/128"	"7"	"128"	"73131.961730957"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"108.0500"	"37599"	"37599"	"37591"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.9"	""	"6.1"	""	"3.0"	""	"5.5"	""	"12.1"	"6.8"	""	"749"	"15"	"35.000"	"28.000"	"1.06280067615136"	"14"	"0.002547"	"0.02506"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"764.40100"	"1527.79473"	"1527.79645"	"-1.13"	"-0.00086"	"9/128"	"9"	"128"	"123843.149658203"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"84.9011"	"29433"	"29433"	"29415"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.9"	""	"8.4"	""	"12.9"	""	"10.2"	""	"15.1"	"13.8"	""	"749"	"26"	"35.000"	"28.000"	"0.098958207961707"	"17"	"0.0006732"	"0.008874"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"764.40100"	"1527.79473"	"1527.79645"	"-1.13"	"-0.00086"	"8/128"	"8"	"128"	"121994.941894531"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"85.2458"	"29571"	"29571"	"29553"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.4"	""	"8.5"	""	"6.6"	""	"12.7"	""	"14.5"	"9.7"	""	"749"	"17"	"35.000"	"28.000"	"0.694147592968847"	"15"	"0.001374"	"0.01601"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40100"	"1527.79473"	"1527.79645"	"-1.13"	"-0.00086"	"5/128"	"5"	"128"	"100284.435791016"	"HCD"	"MS2"	"10.31871"	"4.5"	"100.000"	"104.3112"	"36260"	"36260"	"36251"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.1"	""	"4.3"	""	"4.3"	""	"7.6"	""	"11.1"	"9.3"	""	"749"	"27"	"35.000"	"28.000"	"0.0672127743248782"	"14"	"0.002937"	"0.02804"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40100"	"1527.79473"	"1527.79645"	"-1.13"	"-0.00086"	"4/128"	"4"	"128"	"131940.946044922"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"110.7868"	"38624"	"38624"	"38618"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.3"	""	"3.2"	""	"2.9"	""	"7.5"	""	"6.5"	"4.5"	""	"749"	"15"	"35.000"	"28.000"	"1.20629026233565"	"13"	"0.003111"	"0.03167"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40100"	"1527.79473"	"1527.79645"	"-1.13"	"-0.00086"	"6/128"	"6"	"128"	"171544.411376953"	"HCD"	"MS2"	"43.04707"	"8.3"	"100.000"	"86.1402"	"29916"	"29916"	"29898"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.4"	""	"10.2"	""	"9.6"	""	"13.6"	""	"16.3"	"12.1"	""	"749"	"20"	"35.000"	"28.000"	"0.341548059338789"	"14"	"0.0008629"	"0.01018"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40100"	"1527.79473"	"1527.79645"	"-1.13"	"-0.00086"	"12/128"	"12"	"128"	"219013.84576416"	"HCD"	"MS2"	"6.813371"	"14.2"	"100.000"	"77.5744"	"26502"	"26502"	"26477"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.4"	""	"17.8"	""	"12.5"	""	"28.5"	""	"30.9"	"31.6"	""	"749"	"33"	"35.000"	"28.000"	"0.0202979333455409"	"15"	"0.0003538"	"0.006987"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40100"	"1527.79473"	"1527.79645"	"-1.13"	"-0.00086"	"4/128"	"4"	"128"	"144788.618408203"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"111.5034"	"38689"	"38689"	"38686"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.9"	""	"4.4"	""	"2.8"	""	"8.2"	""	"9.1"	"5.9"	""	"749"	"17"	"35.000"	"28.000"	"0.76463086027874"	"14"	"0.003111"	"0.03089"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"764.40100"	"1527.79473"	"1527.79645"	"-1.13"	"-0.00086"	"9/128"	"9"	"128"	"424877.100341797"	"HCD"	"MS2"	"0"	"24.5"	"100.000"	"68.7514"	"22919"	"22919"	"22901"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.0"	""	"25.6"	""	"29.6"	""	"50.6"	"2.7"	"50.9"	"43.0"	""	"749"	"56"	"35.000"	"28.000"	"9.78254427222505E-05"	"18"	"0"	"0.0003844"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"764.40100"	"1527.79473"	"1527.79645"	"-1.13"	"-0.00086"	"12/128"	"12"	"128"	"5434659.23760986"	"HCD"	"MS2"	"0"	"164.8"	"100.000"	"54.8924"	"17331"	"17331"	"17314"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"224.1"	""	"174.4"	""	"195.9"	""	"314.5"	""	"330.3"	"325.5"	""	"749"	"74"	"35.000"	"28.000"	"1.57199739504633E-06"	"25"	"0"	"3.474E-08"	"1.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7174"	"0.0000"	"1"	"1"	"1"	"509.93643"	"1527.79474"	"1527.79645"	"-1.12"	"-0.00057"	"11/128"	"11"	"128"	"1858812.89855957"	"HCD"	"MS2"	"12.31443"	"32.8"	"100.000"	"61.9351"	"20167"	"20167"	"20153"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.4"	""	"35.6"	""	"45.3"	""	"58.6"	""	"64.3"	"71.3"	""	"749"	"46"	"35.000"	"28.000"	"0.00100334853764473"	"28"	"0"	"3.952E-05"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40106"	"1527.79485"	"1527.79645"	"-1.05"	"-0.00080"	"6/128"	"6"	"128"	"83105.3801269531"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"96.6726"	"33918"	"33918"	"33907"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.1"	""	""	""	"7.2"	""	"9.9"	""	"6.7"	"6.9"	""	"745"	"7"	"35.000"	"28.000"	"7.13060332070354"	"13"	"0.006769"	"0.07678"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40106"	"1527.79485"	"1527.79645"	"-1.05"	"-0.00080"	"4/128"	"4"	"128"	"90445.1356811523"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"96.2858"	"33758"	"33758"	"33745"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.0"	""	"4.0"	""	"5.1"	""	"6.7"	""	"11.7"	"11.7"	""	"745"	"17"	"35.000"	"28.000"	"0.731351703121427"	"14"	"0.0023"	"0.02433"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40106"	"1527.79485"	"1527.79645"	"-1.05"	"-0.00080"	"5/128"	"5"	"128"	"90962.827331543"	"HCD"	"MS2"	"9.837997"	"3.2"	"100.000"	"108.6244"	"37815"	"37815"	"37802"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.5"	""	"2.6"	""	"2.5"	""	"7.6"	""	"4.9"	"8.2"	""	"745"	"8"	"35.000"	"28.000"	"5.99965499103905"	"13"	"0.003653"	"0.03763"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"764.40106"	"1527.79485"	"1527.79645"	"-1.05"	"-0.00080"	"5/128"	"5"	"128"	"138664.056884766"	"HCD"	"MS2"	"11.17088"	"8.4"	"100.000"	"83.3923"	"28835"	"28835"	"28825"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.0"	""	"8.8"	""	"9.4"	""	"19.0"	""	"17.8"	"16.2"	""	"745"	"18"	"35.000"	"28.000"	"0.554787001447316"	"16"	"0.001546"	"0.01936"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"764.40106"	"1527.79485"	"1527.79645"	"-1.05"	"-0.00080"	"7/128"	"7"	"128"	"271512.062744141"	"HCD"	"MS2"	"7.147552"	"17.6"	"100.000"	"72.7270"	"24540"	"24540"	"24515"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.0"	""	"19.9"	""	"20.3"	""	"29.1"	"0.5"	"38.0"	"34.0"	""	"745"	"41"	"35.000"	"28.000"	"0.00293174556661424"	"19"	"0.0001301"	"0.003966"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40106"	"1527.79485"	"1527.79645"	"-1.05"	"-0.00080"	"6/128"	"6"	"128"	"191214.338439941"	"HCD"	"MS2"	"0"	"10.6"	"100.000"	"81.1206"	"27934"	"27934"	"27912"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.2"	""	"10.4"	""	"14.3"	""	"20.6"	""	"22.5"	"20.8"	""	"745"	"28"	"35.000"	"28.000"	"0.0527383183034013"	"14"	"0.001211"	"0.01516"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40106"	"1527.79485"	"1527.79645"	"-1.05"	"-0.00080"	"11/128"	"11"	"128"	"570833.468933105"	"HCD"	"MS2"	"0"	"27.8"	"100.000"	"66.0153"	"21819"	"21819"	"21796"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.7"	""	"28.9"	""	"31.2"	""	"56.9"	""	"57.9"	"56.6"	""	"745"	"60"	"35.000"	"28.000"	"3.39724037660076E-05"	"16"	"0"	"3.182E-05"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9701"	"0.0000"	"1"	"1"	"1"	"764.40106"	"1527.79485"	"1527.79645"	"-1.05"	"-0.00080"	"12/128"	"12"	"128"	"515850.931640625"	"HCD"	"MS2"	"0"	"25.6"	"100.000"	"67.6569"	"22488"	"22488"	"22472"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.8"	""	"22.4"	""	"26.2"	""	"60.0"	""	"55.4"	"52.1"	""	"745"	"67"	"35.000"	"28.000"	"7.14704105899682E-06"	"19"	"0"	"1.637E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"764.40106"	"1527.79485"	"1527.79645"	"-1.05"	"-0.00080"	"14/128"	"14"	"128"	"616734.955078125"	"HCD"	"MS2"	"14.14368"	"31.9"	"100.000"	"66.3696"	"21948"	"21948"	"21927"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.5"	""	"28.8"	""	"35.6"	""	"64.2"	"0.6"	"66.3"	"68.0"	""	"745"	"51"	"35.000"	"28.000"	"0.000279979528021781"	"19"	"0"	"3.934E-05"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"764.40112"	"1527.79497"	"1527.79645"	"-0.97"	"-0.00074"	"6/128"	"6"	"128"	"169773.971923828"	"HCD"	"MS2"	"14.39126"	"10.9"	"100.000"	"85.8792"	"29813"	"29813"	"29796"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.7"	""	"14.9"	""	"13.0"	""	"19.8"	""	"18.8"	"23.0"	""	"745"	"19"	"35.000"	"28.000"	"0.438658225136501"	"16"	"0.001134"	"0.01394"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40112"	"1527.79497"	"1527.79645"	"-0.97"	"-0.00074"	"9/128"	"9"	"128"	"236833.922119141"	"HCD"	"MS2"	"31.44525"	"14.4"	"100.000"	"76.9009"	"26229"	"26229"	"26208"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.5"	""	"16.0"	""	"13.5"	""	"35.0"	""	"32.8"	"24.6"	""	"745"	"34"	"35.000"	"28.000"	"0.0148636776129898"	"15"	"0"	"0.002997"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40112"	"1527.79497"	"1527.79645"	"-0.97"	"-0.00074"	"13/128"	"13"	"128"	"235324.235656738"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"76.0755"	"25904"	"25904"	"25886"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.2"	""	"13.5"	""	"12.3"	""	"25.6"	""	"27.3"	"22.6"	""	"745"	"48"	"35.000"	"28.000"	"0.000625354496750653"	"15"	"0"	"0.0005913"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"764.40112"	"1527.79497"	"1527.79645"	"-0.97"	"-0.00074"	"12/128"	"12"	"128"	"271908.735412598"	"HCD"	"MS2"	"14.63402"	"13.3"	"100.000"	"75.3349"	"25604"	"25604"	"25582"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.8"	""	"19.6"	""	"14.9"	""	"26.5"	""	"26.9"	"23.5"	""	"745"	"34"	"35.000"	"28.000"	"0.0134315544525562"	"19"	"0.0004639"	"0.007827"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40112"	"1527.79497"	"1527.79645"	"-0.97"	"-0.00074"	"7/128"	"7"	"128"	"144489.709655762"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"119.4421"	"39945"	"39945"	"39943"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.7"	""	"4.8"	""	"4.4"	""	"3.1"	""	"4.5"	"7.8"	""	"745"	"5"	"35.000"	"28.000"	"10.8424212647981"	"13"	"0.007602"	"0.09034"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40112"	"1527.79497"	"1527.79645"	"-0.97"	"-0.00074"	"7/128"	"7"	"128"	"324222.963989258"	"HCD"	"MS2"	"0"	"17.4"	"100.000"	"74.4046"	"25235"	"25235"	"25217"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.4"	""	"18.2"	""	"14.1"	""	"34.1"	""	"36.8"	"37.5"	""	"745"	"33"	"35.000"	"28.000"	"0.0201895331674605"	"15"	"0.0007829"	"0.009472"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8367"	"0.0000"	"1"	"1"	"1"	"509.93652"	"1527.79502"	"1527.79645"	"-0.94"	"-0.00048"	"10/128"	"10"	"128"	"1989442.42871094"	"HCD"	"MS2"	"5.734646"	"33.1"	"100.000"	"63.5794"	"20832"	"20832"	"20811"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.7"	""	"30.5"	""	"43.0"	""	"49.6"	""	"93.0"	"58.5"	""	"745"	"49"	"35.000"	"28.000"	"0.000515378476166988"	"24"	"0"	"2.111E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNGPENWHK"	"[K].snGPENWHk.[E]"	"N-Term(TMT6plex); N2(Deamidated); K9(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"509.93652"	"1527.79502"	"1527.79561"	"-0.39"	"-0.00020"	"11/86"	"11"	"86"	"3687335.53387451"	"HCD"	"MS2"	"14.75374"	"122.8"	"100.000"	"42.7442"	"12377"	"12377"	"12354"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"207.7"	""	"122.5"	""	"143.0"	""	"235.0"	"0.7"	"228.4"	"226.5"	""	"745"	"34"	"35.000"	"28.000"	"0.0136184059875889"	"16"	"0"	"0.0006569"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9531"	"0.0000"	"1"	"1"	"1"	"509.93652"	"1527.79502"	"1527.79645"	"-0.94"	"-0.00048"	"18/128"	"18"	"128"	"435331987.376953"	"HCD"	"MS2"	"1.599273"	"84.0"	"3.087"	"60.1509"	"19439"	"19439"	"19431"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"108.4"	""	"84.3"	""	"92.0"	""	"158.9"	""	"186.0"	"174.5"	""	"745"	"64"	"35.000"	"28.000"	"1.52801028362511E-05"	"20"	"0"	"1.011E-06"	"1.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"764.40118"	"1527.79509"	"1527.79645"	"-0.89"	"-0.00068"	"4/128"	"4"	"128"	"58647.6044311523"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"106.3546"	"36966"	"36966"	"36960"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.8"	""	"4.3"	""	"3.0"	""	"5.1"	""	"6.6"	"7.6"	""	"762"	"9"	"35.000"	"28.000"	"4.37446529790313"	"13"	"0.004867"	"0.05217"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40118"	"1527.79509"	"1527.79645"	"-0.89"	"-0.00068"	"6/128"	"6"	"128"	"79030.2601318359"	"HCD"	"MS2"	"9.912739"	"4.8"	"100.000"	"106.2173"	"36988"	"36988"	"36977"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.5"	""	"6.9"	""	"7.7"	""	"9.3"	""	"8.2"	"9.3"	""	"762"	"14"	"35.000"	"28.000"	"1.66312532083503"	"14"	"0.002937"	"0.02806"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40118"	"1527.79509"	"1527.79645"	"-0.89"	"-0.00068"	"5/128"	"5"	"128"	"85581.9961547852"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"110.9866"	"38557"	"38557"	"38553"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	"5.9"	""	"3.9"	""	"7.5"	""	"8.8"	"7.0"	""	"762"	"11"	"35.000"	"28.000"	"3.34137312855725"	"13"	"0.003449"	"0.03542"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"764.40118"	"1527.79509"	"1527.79645"	"-0.89"	"-0.00068"	"10/128"	"10"	"128"	"104779.764587402"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"87.8153"	"30573"	"30573"	"30554"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.8"	""	"5.9"	""	"10.1"	""	"10.4"	""	"10.5"	"10.8"	""	"762"	"26"	"35.000"	"28.000"	"0.0983841132631782"	"20"	"0.000936"	"0.01141"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"764.40118"	"1527.79509"	"1527.79645"	"-0.89"	"-0.00068"	"3/128"	"3"	"128"	"85018.9342651367"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"104.5772"	"36343"	"36343"	"36336"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.5"	""	"3.9"	""	"2.5"	""	"4.4"	""	"5.7"	"5.9"	""	"762"	"7"	"35.000"	"28.000"	"8.45132835943884"	"18"	"0.006639"	"0.0742"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"764.40118"	"1527.79509"	"1527.79645"	"-0.89"	"-0.00068"	"13/128"	"13"	"128"	"142210.265258789"	"HCD"	"MS2"	"10.32675"	"7.0"	"100.000"	"83.3764"	"28831"	"28831"	"28819"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.8"	""	"6.2"	""	"6.3"	""	"15.2"	""	"14.4"	"14.6"	""	"762"	"41"	"35.000"	"28.000"	"0.00334137312855725"	"22"	"0"	"0.002868"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40118"	"1527.79509"	"1527.79645"	"-0.89"	"-0.00068"	"7/128"	"7"	"128"	"117354.296264648"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"117.3964"	"39800"	"39800"	"39797"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.8"	"1.9"	"2.2"	""	"2.4"	""	"5.8"	""	"8.6"	"6.5"	""	"762"	"7"	"35.000"	"28.000"	"7.77902156919091"	"13"	"0.004942"	"0.05334"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8730"	"0.0000"	"1"	"1"	"1"	"764.40118"	"1527.79509"	"1527.79645"	"-0.89"	"-0.00068"	"17/128"	"17"	"128"	"279342.890441895"	"HCD"	"MS2"	"0"	"15.9"	"100.000"	"72.7994"	"24583"	"24583"	"24561"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.9"	""	"13.5"	""	"18.8"	""	"30.7"	""	"28.5"	"35.9"	""	"762"	"63"	"35.000"	"28.000"	"2.13759278868371E-05"	"24"	"0"	"3.208E-05"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9367"	"0.0000"	"1"	"1"	"1"	"764.40118"	"1527.79509"	"1527.79645"	"-0.89"	"-0.00068"	"12/128"	"12"	"128"	"3164796.93432617"	"HCD"	"MS2"	"7.011924"	"135.2"	"100.000"	"63.2061"	"20680"	"20680"	"20662"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"82.2"	""	"65.6"	""	"118.8"	""	"148.4"	"3.4"	"638.6"	"244.9"	""	"762"	"79"	"35.000"	"28.000"	"5.10416817909281E-07"	"22"	"0"	"3.176E-07"	"1.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9012"	"0.0000"	"1"	"1"	"1"	"509.93658"	"1527.79520"	"1527.79645"	"-0.82"	"-0.00042"	"18/128"	"18"	"128"	"532208063.087891"	"HCD"	"MS2"	"2.044805"	"86.7"	"2.518"	"59.8880"	"19352"	"19352"	"19348"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"114.0"	""	"81.5"	""	"93.5"	""	"172.0"	""	"179.8"	"183.6"	""	"762"	"81"	"35.000"	"28.000"	"3.03336712508999E-07"	"26"	"0"	"7.812E-07"	"1.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"764.40125"	"1527.79521"	"1527.79645"	"-0.81"	"-0.00062"	"4/128"	"4"	"128"	"67701.5209350586"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"110.4757"	"38421"	"38421"	"38416"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.0"	""	"4.0"	""	"2.7"	""	"5.3"	""	"7.7"	"8.2"	""	"762"	"13"	"35.000"	"28.000"	"1.9540018730071"	"14"	"0.008777"	"0.1135"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"764.40125"	"1527.79521"	"1527.79645"	"-0.81"	"-0.00062"	"4/128"	"4"	"128"	"86657.6337280273"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"94.7304"	"33215"	"33215"	"33205"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.0"	""	"7.4"	""	"6.8"	""	"11.7"	""	"7.7"	"7.9"	""	"762"	"17"	"35.000"	"28.000"	"0.770770307076422"	"15"	"0.002056"	"0.02249"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40125"	"1527.79521"	"1527.79645"	"-0.81"	"-0.00062"	"5/128"	"5"	"128"	"86711.303527832"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"112.8594"	"39081"	"39081"	"39078"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.8"	""	"1.8"	""	"6.9"	""	"8.3"	""	"7.3"	"6.8"	""	"762"	"5"	"35.000"	"28.000"	"11.6660806823615"	"13"	"0.005119"	"0.0582"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40125"	"1527.79521"	"1527.79645"	"-0.81"	"-0.00062"	"7/128"	"7"	"128"	"108346.264648438"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"100.4141"	"35110"	"35110"	"35102"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.5"	""	"4.2"	""	"2.1"	""	"9.3"	""	"7.5"	"7.4"	""	"762"	"18"	"35.000"	"28.000"	"0.63668552405238"	"14"	"0.003967"	"0.04106"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9245"	"0.0000"	"1"	"1"	"1"	"764.40125"	"1527.79521"	"1527.79645"	"-0.81"	"-0.00062"	"14/128"	"14"	"128"	"219292.101745605"	"HCD"	"MS2"	"0"	"12.3"	"100.000"	"76.4518"	"26056"	"26056"	"26034"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.0"	""	"13.0"	""	"13.9"	""	"25.6"	""	"22.9"	"27.5"	""	"762"	"53"	"35.000"	"28.000"	"0.000182358065174925"	"20"	"0"	"0.001159"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40125"	"1527.79521"	"1527.79645"	"-0.81"	"-0.00062"	"7/128"	"7"	"128"	"232476.749816895"	"HCD"	"MS2"	"14.31258"	"13.7"	"100.000"	"76.7659"	"26183"	"26183"	"26163"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.6"	""	"12.6"	""	"14.9"	""	"29.3"	""	"29.4"	"28.7"	""	"762"	"29"	"35.000"	"28.000"	"0.0458062749589235"	"14"	"0.001211"	"0.01445"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40125"	"1527.79521"	"1527.79645"	"-0.81"	"-0.00062"	"5/128"	"5"	"128"	"133975.145874023"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"118.4290"	"39797"	"39797"	"39795"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.5"	""	"3.4"	""	"1.7"	""	"8.9"	""	"5.2"	"8.7"	""	"762"	"5"	"35.000"	"28.000"	"11.7740255978768"	"13"	"0.006769"	"0.07714"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"764.40125"	"1527.79521"	"1527.79645"	"-0.81"	"-0.00062"	"8/128"	"8"	"128"	"381812.050354004"	"HCD"	"MS2"	"0"	"20.0"	"100.000"	"70.4529"	"23613"	"23613"	"23589"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.5"	""	"23.0"	""	"28.0"	""	"35.2"	"1.1"	"37.6"	"41.3"	""	"762"	"53"	"35.000"	"28.000"	"0.000199951642355164"	"17"	"0"	"6.877E-06"	"0.938"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40125"	"1527.79521"	"1527.79645"	"-0.81"	"-0.00062"	"10/128"	"10"	"128"	"597132.998168945"	"HCD"	"MS2"	"0"	"31.1"	"100.000"	"66.9373"	"22195"	"22195"	"22172"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.1"	""	"27.4"	""	"31.0"	""	"65.2"	"1.2"	"61.7"	"66.4"	""	"762"	"59"	"35.000"	"28.000"	"4.4047876427519E-05"	"16"	"0"	"2.264E-06"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"764.40125"	"1527.79521"	"1527.79645"	"-0.81"	"-0.00062"	"9/128"	"9"	"128"	"1469796.17590332"	"HCD"	"MS2"	"0"	"65.5"	"100.000"	"63.7937"	"20919"	"20919"	"20901"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.0"	""	"57.3"	""	"72.3"	""	"110.8"	"2.9"	"189.7"	"124.5"	""	"762"	"69"	"35.000"	"28.000"	"5.02255817389992E-06"	"23"	"0"	"4.562E-07"	"1.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40131"	"1527.79534"	"1527.79645"	"-0.73"	"-0.00056"	"5/128"	"5"	"128"	"78394.5993041992"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"106.4904"	"37087"	"37087"	"37077"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.7"	""	"4.9"	""	"2.9"	""	"9.5"	""	"5.3"	"6.8"	""	"762"	"10"	"35.000"	"28.000"	"4.09189966102015"	"13"	"0.003111"	"0.03069"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40131"	"1527.79534"	"1527.79645"	"-0.73"	"-0.00056"	"4/128"	"4"	"128"	"72325.955871582"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"100.8828"	"35307"	"35307"	"35303"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.2"	""	"5.1"	""	"3.1"	""	"10.6"	""	"8.1"	"5.9"	""	"762"	"4"	"35.000"	"28.000"	"15.4854908411946"	"13"	"0.006769"	"0.07696"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40131"	"1527.79534"	"1527.79645"	"-0.73"	"-0.00056"	"9/128"	"9"	"128"	"112289.719421387"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"87.1854"	"30325"	"30325"	"30312"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.3"	""	"4.3"	""	"9.1"	""	"10.2"	""	"15.9"	"13.1"	""	"762"	"22"	"35.000"	"28.000"	"0.226947276684553"	"14"	"0.0006732"	"0.008892"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40131"	"1527.79534"	"1527.79645"	"-0.73"	"-0.00056"	"4/128"	"4"	"128"	"85414.6159667969"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"95.6702"	"33539"	"33539"	"33530"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.8"	""	"3.5"	""	"6.6"	""	"6.7"	""	"7.2"	"6.0"	""	"762"	"17"	"35.000"	"28.000"	"0.683793511823193"	"14"	"0.001886"	"0.02096"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40131"	"1527.79534"	"1527.79645"	"-0.73"	"-0.00056"	"5/128"	"5"	"128"	"102598.552612305"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"117.4152"	"39647"	"39647"	"39645"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.5"	""	"2.6"	""	"4.7"	""	"8.0"	""	"11.0"	"4.2"	""	"762"	"7"	"35.000"	"28.000"	"7.56702163513159"	"13"	"0.008478"	"0.1029"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40131"	"1527.79534"	"1527.79645"	"-0.73"	"-0.00056"	"5/128"	"5"	"128"	"112415.616149902"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"112.6048"	"39035"	"39035"	"39030"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.4"	""	"2.6"	""	"2.5"	""	"6.8"	""	"8.1"	"5.5"	""	"762"	"21"	"35.000"	"28.000"	"0.325780417609065"	"14"	"0.001635"	"0.01967"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"764.40131"	"1527.79534"	"1527.79645"	"-0.73"	"-0.00056"	"19/128"	"19"	"128"	"403047.75994873"	"HCD"	"MS2"	"31.00982"	"21.0"	"100.000"	"71.1095"	"23881"	"23881"	"23861"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.0"	""	"18.3"	""	"24.6"	""	"44.0"	""	"41.5"	"47.3"	""	"762"	"52"	"35.000"	"28.000"	"0.000249416382319632"	"18"	"0"	"5.283E-05"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40131"	"1527.79534"	"1527.79645"	"-0.73"	"-0.00056"	"8/128"	"8"	"128"	"672516.552978516"	"HCD"	"MS2"	"3.925875"	"31.2"	"100.000"	"65.7542"	"21697"	"21697"	"21676"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.8"	""	"32.0"	""	"36.1"	""	"57.0"	""	"71.2"	"60.7"	""	"762"	"55"	"35.000"	"28.000"	"0.000114795529521491"	"16"	"0"	"4.561E-05"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9467"	"0.0000"	"1"	"1"	"1"	"764.40131"	"1527.79534"	"1527.79645"	"-0.73"	"-0.00056"	"11/128"	"11"	"128"	"695868.147155762"	"HCD"	"MS2"	"0"	"33.1"	"100.000"	"65.6973"	"21689"	"21689"	"21670"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.9"	""	"33.9"	""	"36.4"	""	"55.2"	""	"75.9"	"75.4"	""	"762"	"75"	"35.000"	"28.000"	"1.31197323620832E-06"	"22"	"0"	"4.142E-08"	"1.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"764.40131"	"1527.79534"	"1527.79645"	"-0.73"	"-0.00056"	"12/128"	"12"	"128"	"4102891.31170654"	"HCD"	"MS2"	"0"	"142.6"	"100.000"	"55.1795"	"17433"	"17433"	"17415"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"186.7"	""	"147.4"	""	"184.5"	""	"277.2"	"3.4"	"283.4"	"270.3"	""	"762"	"70"	"35.000"	"28.000"	"3.77506971004144E-06"	"25"	"0"	"1.86E-07"	"1.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"5/128"	"5"	"128"	"74293.0848999023"	"HCD"	"MS2"	"10.40176"	"4.0"	"100.000"	"97.1666"	"34071"	"34071"	"34062"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.9"	""	"1.7"	""	"4.0"	""	"9.7"	""	"7.2"	"9.3"	""	"752"	"15"	"35.000"	"28.000"	"1.0843958451756"	"17"	"0.001886"	"0.02157"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"7/128"	"7"	"128"	"104985.689331055"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"86.9002"	"30215"	"30215"	"30196"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.3"	""	"6.2"	""	"1.7"	""	"15.3"	""	"14.3"	"11.5"	""	"752"	"10"	"35.000"	"28.000"	"3.95537664557532"	"18"	"0.002973"	"0.02996"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"4/128"	"4"	"128"	"88810.6353759766"	"HCD"	"MS2"	"13.39567"	"4.6"	"100.000"	"93.7742"	"32873"	"32873"	"32862"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.9"	""	"7.9"	""	"5.8"	""	"8.8"	""	"5.9"	"10.4"	""	"752"	"16"	"35.000"	"28.000"	"0.991260601070343"	"15"	"0.002147"	"0.02284"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"5/128"	"5"	"128"	"93696.6080322266"	"HCD"	"MS2"	"100"	"5.3"	"100.000"	"87.5949"	"30493"	"30493"	"30476"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.3"	""	"5.4"	""	"8.5"	""	"11.1"	""	"10.0"	"8.0"	""	"752"	"5"	"35.000"	"28.000"	"11.3028468978821"	"15"	"0.001465"	"0.01834"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"5/128"	"5"	"128"	"90783.9251708984"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"112.0150"	"38792"	"38792"	"38790"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.9"	""	"3.7"	""	"7.3"	""	"4.4"	""	"6.3"	"2.7"	""	"752"	"7"	"35.000"	"28.000"	"7.6065521118303"	"13"	"0.003967"	"0.04214"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"7/128"	"7"	"128"	"97979.8881225586"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"111.7591"	"38743"	"38743"	"38739"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.5"	""	"2.8"	""	"3.8"	""	"7.2"	""	"7.2"	"7.2"	""	"752"	"9"	"35.000"	"28.000"	"4.67937494026041"	"13"	"0.002973"	"0.02914"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"4/128"	"4"	"128"	"89910.1116333008"	"HCD"	"MS2"	"10.90142"	"3.6"	"100.000"	"98.5335"	"34519"	"34519"	"34511"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.0"	""	""	""	"6.1"	""	"8.0"	""	"9.6"	"6.5"	""	"752"	"13"	"35.000"	"28.000"	"1.83733287112905"	"14"	"0.002973"	"0.02847"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"5/128"	"5"	"128"	"96234.8599853516"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"92.9910"	"32564"	"32564"	"32554"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.0"	""	"4.8"	""	"6.7"	""	"7.9"	""	"9.4"	"10.2"	""	"752"	"21"	"35.000"	"28.000"	"0.317093868919368"	"22"	"0.001374"	"0.01599"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"8/128"	"8"	"128"	"103328.339233398"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"116.6531"	"39528"	"39528"	"39526"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.0"	""	"3.8"	""	"4.7"	""	"8.7"	""	"5.8"	"10.6"	""	"752"	"13"	"35.000"	"28.000"	"1.79138051038836"	"14"	"0.003111"	"0.03055"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"6/128"	"6"	"128"	"99238.1419067383"	"HCD"	"MS2"	"12.98532"	"4.8"	"100.000"	"92.8365"	"32520"	"32520"	"32503"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.3"	""	"3.4"	""	"6.8"	""	"9.8"	""	"12.8"	"7.2"	""	"752"	"6"	"35.000"	"28.000"	"9.40129855997858"	"18"	"0.007935"	"0.09732"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"4/128"	"4"	"128"	"97083.2528076172"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"96.8570"	"33964"	"33964"	"33957"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.6"	""	"4.7"	""	"1.8"	""	"10.5"	""	"6.2"	"9.4"	""	"752"	"14"	"35.000"	"28.000"	"1.65648628678464"	"13"	"0.00736"	"0.08451"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"4/128"	"4"	"128"	"91309.9908447266"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"98.2229"	"34447"	"34447"	"34436"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.4"	""	"3.3"	""	"3.7"	""	"5.5"	""	"6.1"	"9.5"	""	"752"	"14"	"35.000"	"28.000"	"1.52471209328592"	"16"	"0.003111"	"0.03164"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"5/128"	"5"	"128"	"90322.8778076172"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"110.5207"	"38557"	"38557"	"38552"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.9"	""	"3.2"	""	"3.7"	""	"6.0"	""	"7.5"	"5.5"	""	"752"	"8"	"35.000"	"28.000"	"6.12615308272536"	"13"	"0.003653"	"0.03755"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"4/128"	"4"	"128"	"107334.138916016"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"113.2919"	"39015"	"39015"	"39013"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.8"	""	""	""	"5.0"	""	"7.1"	""	"6.5"	"6.7"	""	"752"	"14"	"35.000"	"28.000"	"1.6225117288724"	"13"	"0.00344"	"0.03249"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"4/128"	"4"	"128"	"110065.917724609"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"114.3135"	"39189"	"39189"	"39186"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.5"	""	"3.6"	""	"4.5"	""	"9.5"	""	"4.8"	"7.2"	""	"752"	"13"	"35.000"	"28.000"	"1.8714914395208"	"13"	"0.003507"	"0.03655"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"5/128"	"5"	"128"	"131424.967834473"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"118.6825"	"39834"	"39834"	"39832"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.8"	""	"5.4"	""	""	""	"7.7"	""	"9.2"	"5.6"	""	"752"	"15"	"35.000"	"28.000"	"1.15927866929376"	"13"	"0.002937"	"0.02809"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"14/128"	"14"	"128"	"382269.933837891"	"HCD"	"MS2"	"5.770401"	"22.1"	"100.000"	"69.3787"	"23175"	"23175"	"23155"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.0"	""	"22.5"	""	"28.2"	""	"42.2"	""	"47.7"	"41.6"	""	"752"	"47"	"35.000"	"28.000"	"0.000791020693352194"	"21"	"0"	"0.0003525"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"7/128"	"7"	"128"	"164310.621337891"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"114.6775"	"39395"	"39395"	"39391"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.0"	""	"3.3"	""	"1.7"	""	"9.3"	""	"6.8"	"9.1"	""	"752"	"9"	"35.000"	"28.000"	"4.36704678803969"	"13"	"0.003967"	"0.04246"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"8/128"	"8"	"128"	"405207.934326172"	"HCD"	"MS2"	"25.2138"	"24.5"	"100.000"	"72.0772"	"24275"	"24275"	"24250"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.9"	""	"22.2"	""	"27.5"	""	"45.8"	"1.3"	"52.0"	"52.8"	""	"752"	"38"	"35.000"	"28.000"	"0.00645933553571253"	"17"	"0"	"0.003292"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"9/128"	"9"	"128"	"378976.081970215"	"HCD"	"MS2"	"9.224754"	"17.8"	"100.000"	"70.7576"	"23737"	"23737"	"23717"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.5"	""	"14.9"	""	"18.8"	""	"40.1"	""	"36.0"	"38.3"	""	"752"	"43"	"35.000"	"28.000"	"0.00174256041820844"	"15"	"0"	"0.00166"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"509.93668"	"1527.79547"	"1527.79645"	"-0.64"	"-0.00033"	"19/128"	"19"	"128"	"7701499.98876953"	"HCD"	"MS2"	"11.02298"	"71.1"	"100.000"	"61.0265"	"19783"	"19783"	"19766"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"81.1"	""	"75.0"	""	"81.9"	""	"134.0"	""	"157.0"	"152.5"	""	"749"	"86"	"35.000"	"28.000"	"8.69864930235736E-08"	"26"	"0"	"1.114E-07"	"1.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7917"	"0.0000"	"1"	"1"	"1"	"509.93671"	"1527.79557"	"1527.79645"	"-0.58"	"-0.00029"	"18/128"	"18"	"128"	"10166993.0926514"	"HCD"	"MS2"	"7.142215"	"120.7"	"100.000"	"59.6242"	"19246"	"19246"	"19222"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"149.5"	""	"153.6"	""	"142.8"	""	"244.5"	"1.3"	"222.7"	"229.9"	""	"746"	"48"	"35.000"	"28.000"	"0.000550438536911908"	"26"	"0"	"2.16E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"764.40143"	"1527.79558"	"1527.79645"	"-0.57"	"-0.00044"	"8/128"	"8"	"128"	"70001.2737426758"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"108.4972"	"37855"	"37855"	"37832"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.4"	""	"4.4"	""	"4.3"	""	"7.3"	""	"7.3"	"6.9"	""	"746"	"20"	"35.000"	"28.000"	"0.40992917810833"	"14"	"0.001374"	"0.01704"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"3"	"764.40143"	"1527.79558"	"1527.79645"	"-0.57"	"-0.00044"	"5/128"	"5"	"128"	"90271.8049316406"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"92.7015"	"32454"	"32454"	"32443"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.3"	""	"4.2"	""	"6.0"	""	"11.7"	""	"15.5"	"12.0"	""	"746"	"11"	"35.000"	"28.000"	"2.86225835531958"	"21"	"0.003581"	"0.03717"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40143"	"1527.79558"	"1527.79645"	"-0.57"	"-0.00044"	"6/128"	"6"	"128"	"94612.0676269531"	"HCD"	"MS2"	"0"	"5.4"	"100.000"	"90.4734"	"31601"	"31601"	"31595"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.1"	""	"4.7"	""	"4.7"	""	"10.7"	""	"12.6"	"8.8"	""	"746"	"17"	"35.000"	"28.000"	"0.702601110379695"	"14"	"0.001211"	"0.0144"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40143"	"1527.79558"	"1527.79645"	"-0.57"	"-0.00044"	"6/128"	"6"	"128"	"97916.9832763672"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"114.5685"	"39229"	"39229"	"39227"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.0"	""	"2.4"	""	"2.7"	""	"6.2"	""	"9.0"	"7.8"	""	"746"	"6"	"35.000"	"28.000"	"9.72095274149587"	"13"	"0.006769"	"0.07914"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"764.40143"	"1527.79558"	"1527.79645"	"-0.57"	"-0.00044"	"6/128"	"6"	"128"	"101431.235046387"	"HCD"	"MS2"	"6.560858"	"4.1"	"100.000"	"110.2558"	"38470"	"38470"	"38464"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.7"	""	"4.4"	""	"7.7"	""	"7.6"	""	"6.7"	"7.6"	""	"746"	"27"	"35.000"	"28.000"	"0.0752850653653222"	"16"	"0.0008629"	"0.0104"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"764.40143"	"1527.79558"	"1527.79645"	"-0.57"	"-0.00044"	"4/128"	"4"	"128"	"185457.594970703"	"HCD"	"MS2"	"15.74299"	"11.0"	"100.000"	"78.9348"	"27055"	"27055"	"27034"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.7"	""	"13.8"	""	"13.2"	""	"22.1"	""	"24.3"	"16.3"	""	"746"	"18"	"35.000"	"28.000"	"0.547909501561162"	"16"	"0.002056"	"0.02273"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40143"	"1527.79558"	"1527.79645"	"-0.57"	"-0.00044"	"7/128"	"7"	"128"	"111733.49987793"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"118.1623"	"39911"	"39911"	"39908"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.9"	""	"2.9"	""	"3.7"	""	"7.1"	""	"6.4"	"7.0"	""	"746"	"9"	"35.000"	"28.000"	"5.05485650806936"	"13"	"0.00447"	"0.0473"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40143"	"1527.79558"	"1527.79645"	"-0.57"	"-0.00044"	"7/128"	"7"	"128"	"123757.503356934"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"116.6197"	"39680"	"39680"	"39678"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.0"	""	"3.9"	""	"4.1"	""	"8.1"	""	"7.6"	"5.6"	""	"746"	"7"	"35.000"	"28.000"	"8.0298758705219"	"13"	"0.003111"	"0.03163"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40143"	"1527.79558"	"1527.79645"	"-0.57"	"-0.00044"	"9/128"	"9"	"128"	"135223.376831055"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"113.1280"	"39129"	"39129"	"39126"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.8"	""	"3.3"	""	"2.9"	""	"9.3"	""	"7.0"	"5.1"	""	"746"	"22"	"35.000"	"28.000"	"0.237524729298652"	"14"	"0.002973"	"0.02821"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40143"	"1527.79558"	"1527.79645"	"-0.57"	"-0.00044"	"7/128"	"7"	"128"	"137338.360595703"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"118.1746"	"39757"	"39757"	"39755"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	"3.4"	""	"2.8"	""	"5.5"	""	"7.1"	"6.9"	""	"746"	"4"	"35.000"	"28.000"	"13.8902106432954"	"13"	"0.00736"	"0.08654"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9608"	"0.0000"	"1"	"1"	"1"	"764.40143"	"1527.79558"	"1527.79645"	"-0.57"	"-0.00044"	"18/128"	"18"	"128"	"367311.31439209"	"HCD"	"MS2"	"3.422472"	"18.3"	"100.000"	"70.2600"	"23548"	"23548"	"23528"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.1"	""	"17.1"	""	"22.5"	""	"37.0"	"2.9"	"31.5"	"34.5"	""	"746"	"51"	"35.000"	"28.000"	"0.000264672507450344"	"18"	"0"	"2.7E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"764.40143"	"1527.79558"	"1527.79645"	"-0.57"	"-0.00044"	"12/128"	"12"	"128"	"337633.808837891"	"HCD"	"MS2"	"21.81309"	"20.2"	"100.000"	"71.9902"	"24253"	"24253"	"24230"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.4"	""	"22.0"	""	"26.3"	""	"38.8"	"0.3"	"34.2"	"48.2"	""	"746"	"35"	"35.000"	"28.000"	"0.0123227838806732"	"18"	"0.0002479"	"0.005186"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40143"	"1527.79558"	"1527.79645"	"-0.57"	"-0.00044"	"7/128"	"7"	"128"	"284720.290771484"	"HCD"	"MS2"	"31.12855"	"12.8"	"100.000"	"75.5090"	"25664"	"25664"	"25643"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.6"	""	"15.7"	""	"17.2"	""	"24.2"	"1.5"	"23.1"	"24.4"	""	"746"	"36"	"35.000"	"28.000"	"0.0100394248186474"	"15"	"0"	"0.003132"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9608"	"0.0000"	"1"	"1"	"1"	"764.40143"	"1527.79558"	"1527.79645"	"-0.57"	"-0.00044"	"10/128"	"10"	"128"	"626773.99017334"	"HCD"	"MS2"	"15.50685"	"30.8"	"100.000"	"66.3062"	"21937"	"21937"	"21917"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.7"	""	"32.6"	""	"36.4"	""	"50.1"	""	"67.4"	"70.0"	""	"746"	"51"	"35.000"	"28.000"	"0.000265282640592692"	"18"	"0"	"0.001358"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9467"	"0.0000"	"1"	"1"	"1"	"764.40143"	"1527.79558"	"1527.79645"	"-0.57"	"-0.00044"	"11/128"	"11"	"128"	"878459.683227539"	"HCD"	"MS2"	"0"	"39.9"	"100.000"	"65.0848"	"21440"	"21440"	"21421"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.8"	""	"38.6"	""	"46.5"	""	"79.3"	""	"86.6"	"75.9"	""	"746"	"75"	"35.000"	"28.000"	"1.08569748503884E-06"	"21"	"0"	"1.731E-07"	"1.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"1"	"3"	"764.40149"	"1527.79570"	"1527.79645"	"-0.49"	"-0.00037"	"5/128"	"5"	"128"	"64817.2940673828"	"HCD"	"MS2"	"7.416194"	"3.4"	"100.000"	"103.2275"	"36032"	"36032"	"36030"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.7"	""	"3.9"	""	"3.0"	""	"7.2"	""	"8.5"	"4.9"	""	"746"	"0"	"35.000"	"28.000"	"36.7036142448903"	"13"	"0.005829"	"0.06491"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"764.40149"	"1527.79570"	"1527.79645"	"-0.49"	"-0.00037"	"7/128"	"7"	"128"	"79224.599609375"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"112.2695"	"38839"	"38839"	"38836"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.0"	""	"6.4"	""	"4.2"	""	"5.0"	""	"4.8"	"4.6"	""	"746"	"12"	"35.000"	"28.000"	"2.18126701385891"	"15"	"0.002871"	"0.02697"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40149"	"1527.79570"	"1527.79645"	"-0.49"	"-0.00037"	"3/128"	"3"	"128"	"71584.2830200195"	"HCD"	"MS2"	"23.45713"	"3.0"	"100.000"	"104.0100"	"36172"	"36172"	"36167"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.3"	""	""	""	"2.9"	""	"7.9"	""	"7.7"	"6.3"	""	"746"	"6"	"35.000"	"28.000"	"9.41258328135253"	"13"	"0.004676"	"0.05033"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40149"	"1527.79570"	"1527.79645"	"-0.49"	"-0.00037"	"7/128"	"7"	"128"	"96574.8983154297"	"HCD"	"MS2"	"34.51205"	"3.4"	"100.000"	"105.3914"	"36681"	"36681"	"36671"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.5"	""	"3.5"	""	"5.6"	""	"7.4"	""	"1.9"	"9.2"	""	"746"	"9"	"35.000"	"28.000"	"4.62071126775827"	"13"	"0.00263"	"0.02578"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"764.40149"	"1527.79570"	"1527.79645"	"-0.49"	"-0.00037"	"6/128"	"6"	"128"	"116091.663574219"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"88.9085"	"30993"	"30993"	"30973"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.1"	""	"5.0"	""	"8.4"	""	"6.8"	""	"11.1"	"11.9"	""	"746"	"28"	"35.000"	"28.000"	"0.0585745326016415"	"16"	"0.0008629"	"0.01013"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40149"	"1527.79570"	"1527.79645"	"-0.49"	"-0.00037"	"5/128"	"5"	"128"	"133220.25579834"	"HCD"	"MS2"	"8.99282"	"6.3"	"100.000"	"88.6163"	"30885"	"30885"	"30870"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.9"	""	"4.3"	""	"3.9"	""	"13.4"	"1.2"	"8.7"	"19.0"	""	"746"	"16"	"35.000"	"28.000"	"0.967628902070317"	"13"	"0.001812"	"0.02037"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"764.40149"	"1527.79570"	"1527.79645"	"-0.49"	"-0.00037"	"10/128"	"10"	"128"	"229576.566101074"	"HCD"	"MS2"	"36.75722"	"14.0"	"100.000"	"77.2260"	"26360"	"26360"	"26339"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.1"	""	"18.6"	""	"14.3"	""	"28.6"	""	"31.7"	"27.2"	""	"746"	"44"	"35.000"	"28.000"	"0.00149867972446654"	"21"	"0"	"0.00109"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40149"	"1527.79570"	"1527.79645"	"-0.49"	"-0.00037"	"8/128"	"8"	"128"	"443535.75189209"	"HCD"	"MS2"	"0"	"25.0"	"100.000"	"69.2088"	"23120"	"23120"	"23102"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.7"	""	"26.5"	""	"27.8"	""	"47.6"	""	"57.0"	"50.2"	""	"746"	"40"	"35.000"	"28.000"	"0.00386998099100118"	"15"	"0"	"0.0002684"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8361"	"0.0000"	"1"	"1"	"1"	"509.93677"	"1527.79575"	"1527.79645"	"-0.46"	"-0.00023"	"17/128"	"17"	"128"	"2259478.26727295"	"HCD"	"MS2"	"15.38129"	"34.5"	"100.000"	"63.2501"	"20698"	"20698"	"20678"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.3"	""	"30.8"	""	"35.8"	""	"48.5"	"0.9"	"113.7"	"71.6"	""	"755"	"61"	"35.000"	"28.000"	"3.07550867217867E-05"	"26"	"0"	"3.333E-06"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9241"	"0.0000"	"1"	"1"	"1"	"509.93677"	"1527.79575"	"1527.79645"	"-0.46"	"-0.00023"	"19/128"	"19"	"128"	"579472095.458984"	"HCD"	"MS2"	"2.052395"	"98.3"	"2.763"	"59.6397"	"19265"	"19265"	"19259"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"120.6"	""	"96.0"	""	"111.5"	""	"199.6"	"0.0"	"202.0"	"203.8"	""	"755"	"79"	"35.000"	"28.000"	"5.08062283656121E-07"	"23"	"0"	"9.232E-07"	"1.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"509.93677"	"1527.79575"	"1527.79645"	"-0.46"	"-0.00023"	"17/128"	"17"	"128"	"10732458.3262939"	"HCD"	"MS2"	"5.263713"	"124.3"	"100.000"	"59.3804"	"19161"	"19161"	"19142"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"161.1"	""	"153.4"	""	"156.8"	""	"219.9"	""	"229.7"	"259.6"	""	"755"	"46"	"35.000"	"28.000"	"0.000868794286071712"	"26"	"0"	"2.681E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"4/128"	"4"	"128"	"59494.828125"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"100.1994"	"35081"	"35081"	"35074"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.4"	""	"4.7"	""	"4.0"	""	"6.4"	""	"5.8"	"6.1"	""	"757"	"16"	"35.000"	"28.000"	"1.06675793948359"	"16"	"0.001374"	"0.01786"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"7/128"	"7"	"128"	"77740.8962402344"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"108.3316"	"37703"	"37703"	"37695"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1.9"	""	"4.1"	""	"3.5"	""	"6.5"	""	"9.1"	"8.0"	""	"757"	"18"	"35.000"	"28.000"	"0.543332750524359"	"14"	"0.001374"	"0.017"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"5/128"	"5"	"128"	"72053.9157714844"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"109.6981"	"38186"	"38186"	"38180"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.9"	""	"2.4"	""	"2.9"	""	"7.2"	""	"8.2"	"7.1"	""	"757"	"14"	"35.000"	"28.000"	"1.38059368911342"	"17"	"0.002973"	"0.02953"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"5/128"	"5"	"128"	"81260.885559082"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"96.5958"	"33872"	"33872"	"33860"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.4"	""	"4.2"	""	"6.7"	""	"6.2"	""	"6.8"	"8.1"	""	"757"	"9"	"35.000"	"28.000"	"5.16494717198908"	"15"	"0.004817"	"0.05082"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"5/128"	"5"	"128"	"84778.3120727539"	"HCD"	"MS2"	"21.50813"	"3.9"	"100.000"	"95.3866"	"33440"	"33440"	"33430"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.1"	""	"7.2"	""	"5.8"	""	"5.5"	""	"5.6"	"8.0"	""	"757"	"27"	"35.000"	"28.000"	"0.0778154590579997"	"16"	"0.002467"	"0.02486"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"5/128"	"5"	"128"	"82944.9059448242"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"111.8295"	"38882"	"38882"	"38879"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.0"	""	"1.7"	""	"7.2"	""	"6.0"	""	"4.3"	"5.2"	""	"757"	"3"	"35.000"	"28.000"	"20.6569350423046"	"13"	"0.006505"	"0.07345"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"5/128"	"5"	"128"	"83220.7147216797"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"98.8228"	"34616"	"34616"	"34602"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.0"	""	"4.4"	""	"2.3"	""	"7.3"	""	"2.6"	"8.2"	""	"757"	"17"	"35.000"	"28.000"	"0.767477909338805"	"14"	"0.00413"	"0.04568"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"4/128"	"4"	"128"	"104080.352050781"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"94.0482"	"32972"	"32972"	"32962"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.5"	""	"5.4"	""	"6.7"	""	"9.8"	"1.8"	"11.1"	"10.1"	""	"757"	"7"	"35.000"	"28.000"	"7.12961180371889"	"16"	"0.004942"	"0.05475"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"5/128"	"5"	"128"	"177310.204406738"	"HCD"	"MS2"	"11.35223"	"11.1"	"100.000"	"81.0708"	"27915"	"27915"	"27895"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.7"	""	"10.6"	""	"16.6"	""	"20.5"	""	"24.3"	"21.6"	""	"757"	"27"	"35.000"	"28.000"	"0.0828067774664905"	"15"	"0.0008629"	"0.0101"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"6/128"	"6"	"128"	"181735.00769043"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"80.4576"	"27668"	"27668"	"27643"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.9"	""	"10.1"	""	"12.6"	""	"20.5"	""	"20.2"	"17.9"	""	"757"	"29"	"35.000"	"28.000"	"0.0474313934715326"	"17"	"0.0006732"	"0.008887"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"4/128"	"4"	"128"	"113206.948974609"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"114.8235"	"39269"	"39269"	"39267"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.3"	""	"3.4"	""	"2.9"	""	"6.4"	""	"8.0"	"6.9"	""	"757"	"14"	"35.000"	"28.000"	"1.57785061643522"	"13"	"0.001886"	"0.02182"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"5/128"	"5"	"128"	"125600.684143066"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"117.6518"	"39838"	"39838"	"39834"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.0"	""	"3.8"	""	"3.4"	""	"5.5"	""	"9.9"	"6.4"	""	"757"	"12"	"35.000"	"28.000"	"2.43818066997494"	"13"	"0.003111"	"0.03115"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"6/128"	"6"	"128"	"117694.900756836"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"118.9355"	"39872"	"39872"	"39869"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.0"	""	"3.8"	""	"3.5"	""	"8.1"	""	"3.9"	"8.6"	""	"757"	"7"	"35.000"	"28.000"	"6.79306677756111"	"13"	"0.005309"	"0.05999"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"12/128"	"12"	"128"	"222887.172729492"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"76.2498"	"25965"	"25965"	"25949"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.1"	""	"10.7"	""	"14.9"	""	"22.7"	"1.2"	"29.6"	"25.1"	""	"757"	"39"	"35.000"	"28.000"	"0.0047540734125851"	"15"	"0"	"0.002347"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"10/128"	"10"	"128"	"400827.180603027"	"HCD"	"MS2"	"19.65604"	"22.9"	"100.000"	"71.4485"	"24033"	"24033"	"24010"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.3"	""	"20.4"	""	"30.2"	""	"37.0"	""	"56.1"	"48.0"	""	"757"	"51"	"35.000"	"28.000"	"0.000289778315715911"	"23"	"0"	"2.732E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"11/128"	"11"	"128"	"2039490.68041992"	"HCD"	"MS2"	"1.767318"	"87.9"	"100.000"	"63.1937"	"20660"	"20660"	"20641"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"96.2"	""	"70.5"	""	"96.6"	""	"150.0"	""	"250.8"	"173.9"	""	"757"	"72"	"35.000"	"28.000"	"2.43818066997495E-06"	"19"	"0"	"1.048E-07"	"1.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9577"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"11/128"	"11"	"128"	"6036778.72302246"	"HCD"	"MS2"	"14.92925"	"235.5"	"100.000"	"61.3680"	"19938"	"19938"	"19921"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"327.3"	""	"233.7"	""	"285.8"	""	"451.7"	"2.3"	"446.7"	"486.9"	""	"757"	"71"	"35.000"	"28.000"	"2.83182155943471E-06"	"20"	"0"	"1.353E-07"	"1.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"509.93683"	"1527.79593"	"1527.79645"	"-0.34"	"-0.00017"	"13/128"	"13"	"128"	"762454.390869141"	"HCD"	"MS2"	"35.19792"	"19.7"	"100.000"	"65.1216"	"21440"	"21440"	"21415"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.9"	""	"22.8"	""	"29.2"	""	"32.5"	"0.9"	"36.5"	"40.6"	""	"760"	"32"	"35.000"	"28.000"	"0.0215170929834536"	"24"	"0"	"0.0009722"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"509.93683"	"1527.79593"	"1527.79645"	"-0.34"	"-0.00017"	"9/128"	"9"	"128"	"980633.789672852"	"HCD"	"MS2"	"26.85051"	"25.2"	"100.000"	"64.4494"	"21172"	"21172"	"21145"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.0"	""	"28.5"	""	"35.5"	""	"40.8"	""	"50.9"	"56.9"	""	"760"	"26"	"35.000"	"28.000"	"0.102514098432907"	"27"	"0.0001301"	"0.004215"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40161"	"1527.79595"	"1527.79645"	"-0.33"	"-0.00025"	"7/128"	"7"	"128"	"75971.8465576172"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"105.1003"	"36514"	"36514"	"36507"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.3"	""	"4.9"	""	"5.3"	""	"5.4"	""	"5.8"	"6.7"	""	"760"	"19"	"35.000"	"28.000"	"0.450592124303521"	"14"	"0.008668"	"0.1099"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"764.40161"	"1527.79595"	"1527.79645"	"-0.33"	"-0.00025"	"6/128"	"6"	"128"	"77113.671875"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"109.4465"	"38203"	"38203"	"38193"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.0"	""	"3.9"	""	"3.3"	""	"7.3"	""	"6.9"	"8.8"	""	"760"	"6"	"35.000"	"28.000"	"8.94918727880483"	"14"	"0.004867"	"0.05236"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"764.40161"	"1527.79595"	"1527.79645"	"-0.33"	"-0.00025"	"6/128"	"6"	"128"	"137855.586486816"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"82.8264"	"28618"	"28618"	"28606"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.3"	""	"7.3"	""	"7.8"	""	"18.7"	""	"15.0"	"15.5"	""	"760"	"27"	"35.000"	"28.000"	"0.0691486326271794"	"20"	"0.0006732"	"0.008225"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40161"	"1527.79595"	"1527.79645"	"-0.33"	"-0.00025"	"12/128"	"12"	"128"	"160779.951477051"	"HCD"	"MS2"	"14.11443"	"9.3"	"100.000"	"79.3796"	"27230"	"27230"	"27210"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.4"	""	"8.4"	""	"11.4"	""	"17.7"	""	"21.3"	"19.4"	""	"760"	"37"	"35.000"	"28.000"	"0.00835186751658234"	"15"	"0"	"0.002066"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"764.40161"	"1527.79595"	"1527.79645"	"-0.33"	"-0.00025"	"6/128"	"6"	"128"	"165727.626953125"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"79.5207"	"27291"	"27291"	"27281"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.3"	""	"10.8"	""	"8.4"	""	"16.0"	""	"16.3"	"18.3"	""	"760"	"28"	"35.000"	"28.000"	"0.0546743459737221"	"20"	"0.0005778"	"0.008123"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40161"	"1527.79595"	"1527.79645"	"-0.33"	"-0.00025"	"5/128"	"5"	"128"	"135796.169006348"	"HCD"	"MS2"	"14.33857"	"4.1"	"100.000"	"99.9281"	"34987"	"34987"	"34982"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.8"	""	"4.6"	""	"2.0"	""	"8.7"	""	"7.5"	"9.6"	""	"760"	"12"	"35.000"	"28.000"	"2.52803799356662"	"13"	"0.003967"	"0.04251"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9481"	"0.0000"	"1"	"1"	"1"	"764.40161"	"1527.79595"	"1527.79645"	"-0.33"	"-0.00025"	"11/128"	"11"	"128"	"929462.46472168"	"HCD"	"MS2"	"0"	"44.9"	"100.000"	"65.1264"	"21442"	"21442"	"21425"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.3"	""	"44.2"	""	"64.2"	""	"83.2"	"0.4"	"91.3"	"83.1"	""	"760"	"77"	"35.000"	"28.000"	"8.35186751658234E-07"	"21"	"0"	"1.948E-07"	"1.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"764.40161"	"1527.79595"	"1527.79645"	"-0.33"	"-0.00025"	"12/128"	"12"	"128"	"5294036.98150635"	"HCD"	"MS2"	"0"	"240.0"	"100.000"	"63.4897"	"20796"	"20796"	"20779"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"62.6"	""	"51.1"	""	"163.9"	""	"198.4"	""	"1423.9"	"441.1"	""	"760"	"86"	"35.000"	"28.000"	"1.05629104174853E-07"	"24"	"0"	"9.984E-08"	"1.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8916"	"0.0000"	"1"	"1"	"1"	"509.93686"	"1527.79602"	"1527.79645"	"-0.28"	"-0.00014"	"18/128"	"18"	"128"	"9710322.37011719"	"HCD"	"MS2"	"12.81863"	"86.6"	"100.000"	"60.7644"	"19691"	"19691"	"19673"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"97.9"	""	"94.7"	""	"94.6"	""	"163.0"	""	"196.6"	"183.0"	""	"760"	"83"	"35.000"	"28.000"	"2.11243617762753E-07"	"27"	"0"	"1.225E-07"	"1.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40167"	"1527.79607"	"1527.79645"	"-0.25"	"-0.00019"	"5/128"	"5"	"128"	"78207.4956665039"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"96.1107"	"33715"	"33715"	"33704"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.9"	""	"3.0"	""	"6.6"	""	"5.6"	""	"10.8"	"9.4"	""	"760"	"20"	"35.000"	"28.000"	"0.365412665785792"	"14"	"0.001211"	"0.01562"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40167"	"1527.79607"	"1527.79645"	"-0.25"	"-0.00019"	"7/128"	"7"	"128"	"65638.7301025391"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"101.2652"	"35385"	"35385"	"35381"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.8"	""	"6.2"	""	"2.2"	""	"6.4"	""	"6.7"	"5.6"	""	"760"	"23"	"35.000"	"28.000"	"0.198968165902585"	"14"	"0.004069"	"0.04475"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40167"	"1527.79607"	"1527.79645"	"-0.25"	"-0.00019"	"7/128"	"7"	"128"	"82083.1973266602"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"112.3483"	"38985"	"38985"	"38980"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.0"	""	"2.1"	""	"2.6"	""	"6.6"	""	"7.4"	"5.1"	""	"760"	"7"	"35.000"	"28.000"	"7.05965692934846"	"13"	"0.003111"	"0.03064"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40167"	"1527.79607"	"1527.79645"	"-0.25"	"-0.00019"	"5/128"	"5"	"128"	"87375.2888183594"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"94.7896"	"33220"	"33220"	"33209"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.2"	""	"4.8"	""	"3.8"	""	"8.0"	""	"8.3"	"8.0"	""	"760"	"7"	"35.000"	"28.000"	"7.2909412145471"	"13"	"0.00379"	"0.03913"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"764.40167"	"1527.79607"	"1527.79645"	"-0.25"	"-0.00019"	"5/128"	"5"	"128"	"90920.5033569336"	"HCD"	"MS2"	"17.06242"	"4.6"	"100.000"	"95.3067"	"33430"	"33430"	"33414"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.8"	""	"4.2"	""	"6.3"	""	"8.2"	""	"8.5"	"10.3"	""	"760"	"9"	"35.000"	"28.000"	"5.17348979337061"	"15"	"0.002973"	"0.02934"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40167"	"1527.79607"	"1527.79645"	"-0.25"	"-0.00019"	"5/128"	"5"	"128"	"107429.821228027"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"89.1965"	"31107"	"31107"	"31092"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.9"	""	"6.2"	""	"10.6"	"1.7"	"6.9"	""	"12.2"	"8.2"	""	"760"	"19"	"35.000"	"28.000"	"0.530619977201256"	"14"	"0.001374"	"0.01774"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40167"	"1527.79607"	"1527.79645"	"-0.25"	"-0.00019"	"6/128"	"6"	"128"	"92373.9743041992"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"119.7033"	"39990"	"39990"	"39985"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	"4.8"	""	"6.0"	""	"3.6"	""	"4.5"	"7.1"	""	"760"	"2"	"35.000"	"28.000"	"23.647410836428"	"13"	"0.005369"	"0.06132"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40167"	"1527.79607"	"1527.79645"	"-0.25"	"-0.00019"	"6/128"	"6"	"128"	"100459.668151855"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"113.8047"	"39106"	"39106"	"39104"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.8"	""	"3.9"	""	"3.8"	""	"5.5"	""	"8.4"	"11.9"	""	"760"	"14"	"35.000"	"28.000"	"1.55519050697404"	"14"	"0.002056"	"0.02263"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"764.40167"	"1527.79607"	"1527.79645"	"-0.25"	"-0.00019"	"5/128"	"5"	"128"	"85400.2066040039"	"HCD"	"MS2"	"21.79078"	"3.3"	"100.000"	"103.8820"	"36201"	"36201"	"36198"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.6"	""	"3.2"	""	"4.8"	""	"8.8"	""	"5.5"	"4.9"	""	"760"	"10"	"35.000"	"28.000"	"4.15703419183396"	"14"	"0.003922"	"0.03995"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40167"	"1527.79607"	"1527.79645"	"-0.25"	"-0.00019"	"5/128"	"5"	"128"	"73743.271484375"	"HCD"	"MS2"	"0"	"2.4"	"100.000"	"101.9221"	"35648"	"35648"	"35639"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.0"	""	"3.7"	""	""	""	"7.1"	""	"2.6"	"4.7"	""	"760"	"4"	"35.000"	"28.000"	"15.3738838845028"	"13"	"0.008728"	"0.1121"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40167"	"1527.79607"	"1527.79645"	"-0.25"	"-0.00019"	"8/128"	"8"	"128"	"96336.3936767578"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"113.5499"	"39063"	"39063"	"39061"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.4"	""	"2.2"	""	"3.7"	""	"6.7"	""	"7.6"	"6.6"	""	"760"	"15"	"35.000"	"28.000"	"1.14230899499873"	"13"	"0.002056"	"0.02273"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40167"	"1527.79607"	"1527.79645"	"-0.25"	"-0.00019"	"5/128"	"5"	"128"	"94654.4251098633"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"116.3651"	"39641"	"39641"	"39639"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.3"	""	"2.8"	""	"4.1"	""	"9.6"	""	"6.6"	"3.3"	""	"760"	"5"	"35.000"	"28.000"	"12.3817946380763"	"13"	"0.004938"	"0.05256"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40167"	"1527.79607"	"1527.79645"	"-0.25"	"-0.00019"	"4/128"	"4"	"128"	"115335.253967285"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"116.3999"	"39496"	"39496"	"39494"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.7"	""	""	""	"2.9"	""	"3.8"	""	"6.5"	"6.8"	""	"760"	"6"	"35.000"	"28.000"	"9.13657864002634"	"13"	"0.00557"	"0.06299"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40167"	"1527.79607"	"1527.79645"	"-0.25"	"-0.00019"	"6/128"	"6"	"128"	"141927.097290039"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"117.1389"	"39760"	"39760"	"39757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.5"	""	"1.9"	""	"5.4"	""	"8.5"	""	"8.7"	"6.9"	""	"760"	"25"	"35.000"	"28.000"	"0.109341139759955"	"14"	"0.000936"	"0.01272"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"764.40167"	"1527.79607"	"1527.79645"	"-0.25"	"-0.00019"	"14/128"	"14"	"128"	"229340.617797852"	"HCD"	"MS2"	"15.26206"	"12.3"	"100.000"	"76.5684"	"26095"	"26095"	"26072"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.1"	""	"13.3"	""	"14.4"	""	"24.3"	""	"26.0"	"24.2"	""	"760"	"42"	"35.000"	"28.000"	"0.0022479342098668"	"19"	"0"	"0.002241"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40167"	"1527.79607"	"1527.79645"	"-0.25"	"-0.00019"	"6/128"	"6"	"128"	"141241.185668945"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"119.9395"	"40178"	"40178"	"40175"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.1"	""	""	""	"2.8"	""	"8.6"	""	"9.6"	"6.1"	""	"760"	"3"	"35.000"	"28.000"	"20.2667260285296"	"13"	"0.006189"	"0.07048"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9672"	"0.0000"	"1"	"1"	"1"	"764.40167"	"1527.79607"	"1527.79645"	"-0.25"	"-0.00019"	"11/128"	"11"	"128"	"738832.325561523"	"HCD"	"MS2"	"4.189772"	"36.9"	"100.000"	"65.3952"	"21566"	"21566"	"21547"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.6"	""	"42.4"	""	"42.7"	""	"68.7"	"1.6"	"76.0"	"64.0"	""	"760"	"61"	"35.000"	"28.000"	"3.27931848151449E-05"	"19"	"0"	"1.221E-05"	"0.884"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"764.40167"	"1527.79607"	"1527.79645"	"-0.25"	"-0.00019"	"16/128"	"16"	"128"	"766821.602966309"	"HCD"	"MS2"	"0"	"37.5"	"100.000"	"65.4431"	"21570"	"21570"	"21549"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.9"	""	"47.0"	""	"42.8"	""	"71.7"	"0.3"	"70.7"	"71.1"	""	"760"	"62"	"35.000"	"28.000"	"2.23760589035124E-05"	"18"	"0"	"7.315E-07"	"1.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"13/128"	"13"	"128"	"111552.224914551"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"85.2064"	"29556"	"29556"	"29540"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.2"	""	"7.6"	""	"12.2"	""	"12.4"	""	"13.7"	"13.7"	""	"760"	"33"	"35.000"	"28.000"	"0.0189576105234805"	"18"	"0"	"0.003352"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"8/128"	"8"	"128"	"81904.9053955078"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"113.6431"	"39219"	"39219"	"39216"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	"5.8"	""	""	""	"6.5"	""	"7.0"	"5.1"	""	"760"	"11"	"35.000"	"28.000"	"2.89590023809657"	"13"	"0.002795"	"0.02654"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"4/128"	"4"	"128"	"85758.0977172852"	"HCD"	"MS2"	"4.440315"	"3.5"	"100.000"	"115.1922"	"39480"	"39480"	"39476"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.2"	""	"2.7"	""	"4.6"	""	"5.4"	""	"8.4"	"7.1"	""	"760"	"16"	"35.000"	"28.000"	"1.00643005267055"	"13"	"0.00263"	"0.02581"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"5/128"	"5"	"128"	"78258.5238647461"	"HCD"	"MS2"	"23.31945"	"3.4"	"100.000"	"105.4063"	"36619"	"36619"	"36609"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.8"	""	"4.0"	""	"4.0"	""	"7.1"	""	"7.4"	"5.9"	""	"760"	"10"	"35.000"	"28.000"	"3.75650175969637"	"13"	"0.007339"	"0.08381"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"4/128"	"4"	"128"	"99984.5095214844"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"91.3404"	"31942"	"31942"	"31936"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.6"	""	"7.5"	""	"5.8"	""	"7.2"	""	"9.3"	"8.2"	""	"760"	"8"	"35.000"	"28.000"	"6.42367554024441"	"15"	"0.005119"	"0.05856"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"4/128"	"4"	"128"	"79360.9774169922"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"101.1507"	"35393"	"35393"	"35387"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.2"	""	"2.1"	""	"3.1"	""	"9.0"	""	"5.9"	"5.0"	""	"760"	"12"	"35.000"	"28.000"	"2.33229561962622"	"13"	"0.004942"	"0.05329"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"5/128"	"5"	"128"	"104291.411437988"	"HCD"	"MS2"	"13.86653"	"6.1"	"100.000"	"86.4272"	"30030"	"30030"	"30014"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.2"	""	"3.7"	""	"6.6"	""	"14.6"	""	"11.5"	"12.7"	""	"760"	"4"	"35.000"	"28.000"	"14.7837155097827"	"13"	"0.00447"	"0.04752"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"6/128"	"6"	"128"	"112977.272949219"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"88.6160"	"30880"	"30880"	"30871"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.0"	""	"6.0"	""	"6.6"	""	"13.5"	""	"16.2"	"14.4"	""	"760"	"27"	"35.000"	"28.000"	"0.0689895951853791"	"19"	"0.0006732"	"0.008644"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"6/128"	"6"	"128"	"160984.749389648"	"HCD"	"MS2"	"0"	"10.1"	"100.000"	"79.7902"	"27395"	"27395"	"27373"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.0"	""	"7.9"	""	"11.2"	""	"24.6"	"1.6"	"20.0"	"17.4"	""	"760"	"33"	"35.000"	"28.000"	"0.0205014036555748"	"18"	"0.0001301"	"0.004861"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"5/128"	"5"	"128"	"115156.170593262"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"113.9024"	"39262"	"39262"	"39259"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.1"	""	""	""	"3.7"	""	"5.9"	""	"6.3"	"8.1"	""	"760"	"8"	"35.000"	"28.000"	"6.16287836996393"	"13"	"0.00413"	"0.04524"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"7/128"	"7"	"128"	"110332.972717285"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"116.1279"	"39456"	"39456"	"39454"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.6"	""	"4.3"	""	""	""	"9.2"	""	"7.6"	"3.6"	""	"760"	"21"	"35.000"	"28.000"	"0.322688580513799"	"14"	"0.000936"	"0.01334"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"6/128"	"6"	"128"	"150857.351623535"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"114.9346"	"39436"	"39436"	"39432"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.0"	""	"2.3"	""	"4.7"	""	"7.2"	""	"8.3"	"8.8"	""	"760"	"9"	"35.000"	"28.000"	"4.8616489557986"	"13"	"0.003967"	"0.0414"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"6/128"	"6"	"128"	"250090.943725586"	"HCD"	"MS2"	"29.70805"	"14.8"	"100.000"	"77.0770"	"26310"	"26310"	"26285"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.4"	""	"13.6"	""	"15.5"	""	"32.7"	""	"28.2"	"28.8"	""	"760"	"26"	"35.000"	"28.000"	"0.0974503933876733"	"14"	"0.0003538"	"0.007293"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"4/128"	"4"	"128"	"162149.466125488"	"HCD"	"MS2"	"4.9236"	"3.5"	"100.000"	"114.4207"	"39354"	"39354"	"39349"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.9"	""	"3.3"	""	"2.5"	""	"8.3"	"1.9"	"8.3"	"5.2"	""	"760"	"10"	"35.000"	"28.000"	"3.52195332884153"	"13"	"0.00447"	"0.04717"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"6/128"	"6"	"128"	"290488.625793457"	"HCD"	"MS2"	"0"	"16.5"	"100.000"	"74.6884"	"25349"	"25349"	"25335"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.2"	""	"19.0"	""	"18.2"	""	"29.5"	""	"36.5"	"29.7"	""	"760"	"25"	"35.000"	"28.000"	"0.110352860869649"	"14"	"0.003449"	"0.03366"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"6/128"	"6"	"128"	"160207.535522461"	"HCD"	"MS2"	"15.77295"	"3.4"	"100.000"	"102.7159"	"35824"	"35824"	"35820"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.0"	""	"2.8"	""	"6.2"	""	"5.1"	""	"8.2"	"6.2"	""	"760"	"2"	"35.000"	"28.000"	"25.455615157828"	"13"	"0.006308"	"0.07179"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"9/128"	"9"	"128"	"314714.484191895"	"HCD"	"MS2"	"0"	"17.0"	"100.000"	"73.3313"	"24785"	"24785"	"24768"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.3"	""	"22.0"	""	"21.2"	""	"25.4"	""	"37.3"	"34.2"	""	"760"	"41"	"35.000"	"28.000"	"0.00317529146927874"	"15"	"0"	"0.002251"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"6/128"	"6"	"128"	"124776.920288086"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"112.7815"	"38932"	"38932"	"38930"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.6"	""	"3.9"	""	"2.6"	""	"8.1"	""	"7.4"	"6.0"	""	"760"	"3"	"35.000"	"28.000"	"18.6544992937989"	"13"	"0.004942"	"0.05388"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9608"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"17/128"	"17"	"128"	"386593.947631836"	"HCD"	"MS2"	"0"	"20.8"	"100.000"	"69.8033"	"23362"	"23362"	"23342"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.6"	""	"20.6"	""	"30.2"	""	"34.4"	""	"41.0"	"46.2"	""	"760"	"51"	"35.000"	"28.000"	"0.00028759650010797"	"18"	"0"	"0.000604"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9194"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"11/128"	"11"	"128"	"620641.060546875"	"HCD"	"MS2"	"3.724131"	"31.0"	"100.000"	"66.0654"	"21824"	"21824"	"21801"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.3"	""	"29.0"	""	"34.0"	""	"65.2"	""	"59.9"	"64.1"	""	"760"	"62"	"35.000"	"28.000"	"2.62291125459292E-05"	"21"	"0"	"9.532E-06"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"9/128"	"9"	"128"	"1137060.48522949"	"HCD"	"MS2"	"0"	"54.9"	"100.000"	"64.0838"	"21037"	"21037"	"21018"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.1"	""	"54.3"	""	"58.3"	""	"104.3"	"1.2"	"117.4"	"118.5"	""	"760"	"69"	"35.000"	"28.000"	"4.96344937490099E-06"	"20"	"0"	"3.392E-07"	"1.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"764.40173"	"1527.79619"	"1527.79645"	"-0.17"	"-0.00013"	"12/128"	"12"	"128"	"1306638.64715576"	"HCD"	"MS2"	"0"	"59.5"	"100.000"	"64.1085"	"21033"	"21033"	"21015"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.1"	""	"58.5"	""	"66.7"	""	"109.9"	"2.6"	"130.7"	"120.5"	""	"760"	"70"	"35.000"	"28.000"	"3.64572239976054E-06"	"24"	"0"	"8.758E-08"	"1.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"509.93692"	"1527.79621"	"1527.79645"	"-0.16"	"-0.00008"	"9/128"	"9"	"128"	"597085.947021484"	"HCD"	"MS2"	"38.69264"	"28.6"	"100.000"	"67.8759"	"22577"	"22577"	"22546"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.4"	""	"50.0"	""	"40.1"	""	"40.5"	""	"39.1"	"54.0"	""	"760"	"9"	"35.000"	"28.000"	"4.58969257340576"	"14"	"0.002056"	"0.02251"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.6857"	"0.0000"	"1"	"1"	"1"	"509.93692"	"1527.79621"	"1527.79645"	"-0.16"	"-0.00008"	"9/128"	"9"	"128"	"750873.619506836"	"HCD"	"MS2"	"41.07377"	"19.9"	"100.000"	"64.9782"	"21397"	"21397"	"21374"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.8"	""	"25.6"	""	"23.5"	""	"31.4"	""	"37.6"	"46.5"	""	"760"	"35"	"35.000"	"28.000"	"0.0124103376225488"	"25"	"0"	"0.001114"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8361"	"0.0000"	"1"	"1"	"1"	"509.93695"	"1527.79630"	"1527.79645"	"-0.10"	"-0.00005"	"10/128"	"10"	"128"	"1796787.69458008"	"HCD"	"MS2"	"1.132968"	"29.3"	"100.000"	"63.6892"	"20862"	"20862"	"20843"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.4"	""	"30.5"	""	"32.9"	""	"41.7"	""	"91.5"	"57.0"	""	"759"	"61"	"35.000"	"28.000"	"3.28255325175375E-05"	"26"	"0"	"1.276E-05"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8841"	"0.0000"	"1"	"1"	"1"	"509.93695"	"1527.79630"	"1527.79645"	"-0.10"	"-0.00005"	"17/128"	"17"	"128"	"75286001.6337891"	"HCD"	"MS2"	"11.92474"	"91.7"	"14.692"	"60.7114"	"19655"	"19655"	"19640"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.9"	""	"67.4"	""	"102.7"	""	"187.3"	""	"216.4"	"210.0"	""	"759"	"69"	"35.000"	"28.000"	"4.42804249674635E-06"	"25"	"0"	"4.28E-07"	"1.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40179"	"1527.79631"	"1527.79645"	"-0.09"	"-0.00007"	"4/128"	"4"	"128"	"73272.7952270508"	"HCD"	"MS2"	"11.48004"	"3.6"	"100.000"	"109.1575"	"38002"	"38002"	"37995"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.6"	""	"3.7"	""	"3.9"	""	"8.7"	""	"6.4"	"7.4"	""	"756"	"16"	"35.000"	"28.000"	"0.877994509022986"	"14"	"0.003189"	"0.0321"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40179"	"1527.79631"	"1527.79645"	"-0.09"	"-0.00007"	"4/128"	"4"	"128"	"127255.063842773"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"84.8942"	"29432"	"29432"	"29411"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.9"	""	"6.8"	""	"4.0"	""	"15.6"	""	"17.1"	"12.4"	""	"756"	"17"	"35.000"	"28.000"	"0.730284023832397"	"14"	"0.002147"	"0.02278"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"1"	"1"	"764.40179"	"1527.79631"	"1527.79645"	"-0.09"	"-0.00007"	"3/128"	"3"	"128"	"82133.4362182617"	"HCD"	"MS2"	"0"	"2.3"	"100.000"	"115.8157"	"39564"	"39564"	"39562"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.1"	""	"2.4"	""	"3.0"	""	"5.5"	""	"3.7"	"4.5"	""	"756"	"0"	"35.000"	"28.000"	"35.9328612002074"	"13"	"0.005254"	"0.05925"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"764.40179"	"1527.79631"	"1527.79645"	"-0.09"	"-0.00007"	"4/128"	"4"	"128"	"79120.0051269531"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"101.7648"	"35598"	"35598"	"35590"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.9"	""	"2.4"	""	"4.2"	""	"4.5"	""	"5.8"	"7.3"	""	"756"	"13"	"35.000"	"28.000"	"1.96558486689669"	"16"	"0.008052"	"0.09889"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40179"	"1527.79631"	"1527.79645"	"-0.09"	"-0.00007"	"8/128"	"8"	"128"	"91601.5832519531"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"116.8760"	"39724"	"39724"	"39721"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.4"	""	"2.9"	""	"3.3"	""	"6.8"	""	"4.5"	"6.1"	""	"756"	"12"	"35.000"	"28.000"	"2.39051679820211"	"13"	"0.00263"	"0.02558"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"764.40179"	"1527.79631"	"1527.79645"	"-0.09"	"-0.00007"	"8/128"	"8"	"128"	"184598.444580078"	"HCD"	"MS2"	"0"	"11.3"	"100.000"	"79.8228"	"27412"	"27412"	"27398"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.3"	""	"12.0"	""	"10.7"	""	"23.5"	""	"22.9"	"21.1"	""	"756"	"51"	"35.000"	"28.000"	"0.000276370573556732"	"19"	"0"	"0.00038"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40179"	"1527.79631"	"1527.79645"	"-0.09"	"-0.00007"	"10/128"	"10"	"128"	"139406.67565918"	"HCD"	"MS2"	"12.61449"	"9.3"	"100.000"	"83.9848"	"29069"	"29069"	"29048"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.4"	""	"10.7"	""	"13.1"	""	"18.3"	""	"15.1"	"17.9"	""	"756"	"25"	"35.000"	"28.000"	"0.112587921032423"	"14"	"0.0008629"	"0.01"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40179"	"1527.79631"	"1527.79645"	"-0.09"	"-0.00007"	"5/128"	"5"	"128"	"106216.56262207"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"116.0802"	"39600"	"39600"	"39598"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.5"	""	"3.0"	""	"2.3"	""	"7.3"	""	"8.6"	"4.4"	""	"756"	"13"	"35.000"	"28.000"	"1.88144618122038"	"13"	"0.002871"	"0.02713"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40179"	"1527.79631"	"1527.79645"	"-0.09"	"-0.00007"	"8/128"	"8"	"128"	"97731.8596191406"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"112.0881"	"38935"	"38935"	"38932"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.5"	""	"3.2"	""	"5.4"	""	"7.5"	""	"2.6"	"6.8"	""	"756"	"12"	"35.000"	"28.000"	"2.1701602271437"	"13"	"0.002871"	"0.02697"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40179"	"1527.79631"	"1527.79645"	"-0.09"	"-0.00007"	"5/128"	"5"	"128"	"132222.127075195"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"119.9592"	"40035"	"40035"	"40032"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.9"	""	"3.6"	""	"5.1"	""	"8.5"	""	"4.8"	"4.2"	""	"756"	"13"	"35.000"	"28.000"	"1.78439829597637"	"13"	"0.005001"	"0.0567"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40179"	"1527.79631"	"1527.79645"	"-0.09"	"-0.00007"	"18/128"	"18"	"128"	"393631.670349121"	"HCD"	"MS2"	"3.47397"	"20.3"	"100.000"	"69.0649"	"23047"	"23047"	"23028"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.1"	""	"18.4"	""	"25.2"	""	"46.8"	""	"38.7"	"35.8"	""	"756"	"45"	"35.000"	"28.000"	"0.00118165800077286"	"15"	"0"	"0.002278"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9710"	"0.0000"	"1"	"1"	"1"	"764.40179"	"1527.79631"	"1527.79645"	"-0.09"	"-0.00007"	"12/128"	"12"	"128"	"1046634.96813965"	"HCD"	"MS2"	"4.262963"	"47.4"	"100.000"	"64.4380"	"21167"	"21167"	"21145"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.2"	""	"46.3"	""	"52.2"	""	"89.9"	"0.6"	"105.6"	"101.2"	""	"756"	"69"	"35.000"	"28.000"	"5.01755105021842E-06"	"19"	"0"	"5.078E-08"	"1.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9661"	"0.0000"	"1"	"1"	"1"	"764.40179"	"1527.79631"	"1527.79645"	"-0.09"	"-0.00007"	"10/128"	"10"	"128"	"1104893.921875"	"HCD"	"MS2"	"17.0387"	"55.0"	"100.000"	"55.8429"	"17718"	"17718"	"17697"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.8"	""	"60.5"	""	"66.2"	""	"108.4"	""	"122.2"	"101.0"	""	"756"	"59"	"35.000"	"28.000"	"4.39027576031649E-05"	"18"	"0"	"1.449E-07"	"1.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9306"	"0.0000"	"1"	"1"	"1"	"764.40179"	"1527.79631"	"1527.79645"	"-0.09"	"-0.00007"	"11/128"	"11"	"128"	"1746277.85882568"	"HCD"	"MS2"	"0"	"73.7"	"100.000"	"62.8928"	"20553"	"20553"	"20535"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.5"	""	"72.0"	""	"80.6"	""	"144.4"	"0.7"	"164.6"	"148.2"	""	"756"	"72"	"35.000"	"28.000"	"2.20542249415475E-06"	"22"	"0"	"2.006E-08"	"1.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"764.40186"	"1527.79643"	"1527.79645"	"-0.01"	"-0.00001"	"4/128"	"4"	"128"	"79568.6766357422"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"95.9366"	"33634"	"33634"	"33631"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.5"	""	"2.1"	""	"3.6"	""	"9.6"	""	"7.3"	"10.3"	""	"756"	"3"	"35.000"	"28.000"	"18.8578336259884"	"13"	"0.004817"	"0.05062"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"764.40186"	"1527.79643"	"1527.79645"	"-0.01"	"-0.00001"	"3/128"	"3"	"128"	"72114.5903930664"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"100.1526"	"35022"	"35022"	"35017"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.7"	""	"3.6"	""	"4.8"	""	"4.1"	""	"7.0"	"5.1"	""	"756"	"6"	"35.000"	"28.000"	"9.45130546721251"	"14"	"0.00447"	"0.04814"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"764.40186"	"1527.79643"	"1527.79645"	"-0.01"	"-0.00001"	"8/128"	"8"	"128"	"139257.68548584"	"HCD"	"MS2"	"7.879776"	"8.5"	"100.000"	"83.0939"	"28721"	"28721"	"28705"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.4"	""	"8.1"	""	"11.5"	""	"17.6"	""	"14.3"	"16.2"	""	"756"	"33"	"35.000"	"28.000"	"0.0190323230121828"	"18"	"0.0001301"	"0.004984"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40186"	"1527.79643"	"1527.79645"	"-0.01"	"-0.00001"	"7/128"	"7"	"128"	"119639.829040527"	"HCD"	"MS2"	"10.81274"	"2.9"	"100.000"	"102.0228"	"35629"	"35629"	"35626"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.3"	""	"3.7"	""	"2.7"	""	"6.0"	""	"4.4"	"6.5"	""	"756"	"15"	"35.000"	"28.000"	"1.25745311145134"	"13"	"0.0023"	"0.02334"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40186"	"1527.79643"	"1527.79645"	"-0.01"	"-0.00001"	"7/128"	"7"	"128"	"196812.110046387"	"HCD"	"MS2"	"16.27348"	"11.7"	"100.000"	"78.9972"	"27076"	"27076"	"27052"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.6"	""	"7.9"	""	"9.7"	""	"27.4"	""	"26.4"	"22.2"	""	"756"	"39"	"35.000"	"28.000"	"0.00456553629670363"	"15"	"0.000936"	"0.01293"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40186"	"1527.79643"	"1527.79645"	"-0.01"	"-0.00001"	"7/128"	"7"	"128"	"114355.600585938"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"118.4177"	"39948"	"39948"	"39945"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.2"	""	"3.0"	""	"3.9"	""	"7.6"	""	"7.1"	"5.7"	""	"756"	"7"	"35.000"	"28.000"	"7.21924531738038"	"13"	"0.004069"	"0.04379"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40186"	"1527.79643"	"1527.79645"	"-0.01"	"-0.00001"	"4/128"	"4"	"128"	"142329.661865234"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"100.6886"	"35200"	"35200"	"35190"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.1"	""	"4.5"	""	"3.6"	""	"9.2"	""	"6.1"	"6.6"	""	"756"	"18"	"35.000"	"28.000"	"0.576091940935376"	"14"	"0.0023"	"0.02326"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40186"	"1527.79643"	"1527.79645"	"-0.01"	"-0.00001"	"7/128"	"7"	"128"	"127684.581359863"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"119.1800"	"40057"	"40057"	"40054"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.1"	""	"3.5"	""	"3.4"	""	"8.9"	""	"7.0"	"6.3"	""	"756"	"1"	"35.000"	"28.000"	"29.6136404965628"	"13"	"0.006769"	"0.07749"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40186"	"1527.79643"	"1527.79645"	"-0.01"	"-0.00001"	"5/128"	"5"	"128"	"125672.150756836"	"HCD"	"MS2"	"4.083362"	"3.0"	"100.000"	"117.6687"	"39685"	"39685"	"39683"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.9"	""	"4.8"	""	"3.0"	""	"3.7"	""	"7.1"	"5.5"	""	"756"	"11"	"35.000"	"28.000"	"3.07249935110029"	"13"	"0.004282"	"0.04618"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40186"	"1527.79643"	"1527.79645"	"-0.01"	"-0.00001"	"8/128"	"8"	"128"	"137929.521728516"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"118.9256"	"40020"	"40020"	"40017"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.9"	""	"1.6"	""	"1.9"	""	"7.7"	""	"7.2"	"4.9"	""	"756"	"5"	"35.000"	"28.000"	"12.1756400310514"	"13"	"0.00447"	"0.04724"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40186"	"1527.79643"	"1527.79645"	"-0.01"	"-0.00001"	"18/128"	"18"	"128"	"377363.530700684"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"69.9868"	"23423"	"23423"	"23401"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.7"	""	"23.7"	""	"25.7"	""	"41.5"	""	"46.3"	"42.4"	""	"756"	"63"	"35.000"	"28.000"	"1.77619973052771E-05"	"16"	"0"	"5.804E-06"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40186"	"1527.79643"	"1527.79645"	"-0.01"	"-0.00001"	"7/128"	"7"	"128"	"290632.370849609"	"HCD"	"MS2"	"0"	"18.0"	"100.000"	"73.1040"	"24706"	"24706"	"24691"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.3"	""	"21.8"	""	"19.8"	""	"28.2"	""	"40.3"	"43.2"	""	"756"	"43"	"35.000"	"28.000"	"0.00189885498839462"	"15"	"0"	"0.001167"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"764.40186"	"1527.79643"	"1527.79645"	"-0.01"	"-0.00001"	"9/128"	"9"	"128"	"474982.916320801"	"HCD"	"MS2"	"0"	"24.8"	"100.000"	"67.8315"	"22544"	"22544"	"22526"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.8"	""	"23.8"	""	"32.5"	""	"44.8"	""	"49.4"	"52.6"	""	"756"	"74"	"35.000"	"28.000"	"1.63490228131233E-06"	"19"	"0"	"3.053E-07"	"1.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"764.40186"	"1527.79643"	"1527.79645"	"-0.01"	"-0.00001"	"12/128"	"12"	"128"	"2361308.31134033"	"HCD"	"MS2"	"0"	"103.7"	"100.000"	"63.7908"	"20904"	"20904"	"20888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.2"	""	"56.6"	""	"91.3"	""	"143.0"	"2.3"	"412.2"	"202.8"	""	"756"	"72"	"35.000"	"28.000"	"2.1403845125646E-06"	"23"	"0"	"1.28E-07"	"1.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8933"	"0.0000"	"1"	"1"	"1"	"764.40186"	"1527.79643"	"1527.79645"	"-0.01"	"-0.00001"	"11/128"	"11"	"128"	"2820261.08087158"	"HCD"	"MS2"	"0"	"114.1"	"100.000"	"62.0197"	"20200"	"20200"	"20193"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"143.7"	""	"114.7"	""	"134.4"	""	"217.9"	"0.8"	"244.0"	"228.6"	""	"756"	"75"	"35.000"	"28.000"	"1.28083091020618E-06"	"25"	"0"	"1.224E-07"	"1.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"764.40186"	"1527.79643"	"1527.79645"	"-0.01"	"-0.00001"	"12/128"	"12"	"128"	"5746573.69934082"	"HCD"	"MS2"	"1.603887"	"246.7"	"100.000"	"63.4866"	"20780"	"20780"	"20763"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.2"	""	"49.1"	""	"181.2"	""	"186.6"	""	"1470.8"	"462.8"	""	"756"	"84"	"35.000"	"28.000"	"1.43711591809172E-07"	"25"	"0"	"1.683E-08"	"1.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9467"	"0.0000"	"1"	"1"	"1"	"509.93701"	"1527.79648"	"1527.79645"	"0.02"	"0.00001"	"18/128"	"18"	"128"	"462121562.691406"	"HCD"	"MS2"	"1.698097"	"98.4"	"3.347"	"59.9044"	"19354"	"19354"	"19345"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"126.1"	""	"95.6"	""	"104.9"	""	"189.6"	""	"232.0"	"193.7"	""	"756"	"75"	"35.000"	"28.000"	"1.12587921032423E-06"	"22"	"0"	"8.437E-07"	"1.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40192"	"1527.79656"	"1527.79645"	"0.07"	"0.00005"	"5/128"	"5"	"128"	"77830.1276855469"	"HCD"	"MS2"	"16.63805"	"3.3"	"100.000"	"97.2030"	"34096"	"34096"	"34089"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.4"	""	"2.7"	""	"6.1"	""	"5.0"	""	"6.6"	"6.1"	""	"755"	"24"	"35.000"	"28.000"	"0.149250899075718"	"14"	"0.0006732"	"0.009322"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40192"	"1527.79656"	"1527.79645"	"0.07"	"0.00005"	"6/128"	"6"	"128"	"72324.996887207"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"101.4188"	"35481"	"35481"	"35473"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.9"	""	"3.5"	""	""	""	"8.0"	""	"6.3"	"4.0"	""	"755"	"16"	"35.000"	"28.000"	"1.01138604261918"	"13"	"0.004942"	"0.05458"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"764.40192"	"1527.79656"	"1527.79645"	"0.07"	"0.00005"	"4/128"	"4"	"128"	"80381.5684204102"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"96.3881"	"33815"	"33815"	"33802"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.3"	""	"4.6"	""	"4.9"	""	"7.4"	""	"6.6"	"8.0"	""	"755"	"9"	"35.000"	"28.000"	"4.70887276626711"	"15"	"0.003967"	"0.04199"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40192"	"1527.79656"	"1527.79645"	"0.07"	"0.00005"	"7/128"	"7"	"128"	"83526.3547363281"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"111.0478"	"38696"	"38696"	"38691"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.8"	""	"3.8"	""	"3.8"	""	"8.5"	""	"8.0"	"11.5"	""	"755"	"13"	"35.000"	"28.000"	"1.81935293603486"	"13"	"0.001374"	"0.01665"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40192"	"1527.79656"	"1527.79645"	"0.07"	"0.00005"	"7/128"	"7"	"128"	"86200.5487670898"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"109.9547"	"38268"	"38268"	"38265"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.9"	""	"4.3"	""	"5.3"	""	"4.6"	""	"7.2"	"5.7"	""	"755"	"10"	"35.000"	"28.000"	"3.49878258325705"	"13"	"0.003111"	"0.03139"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40192"	"1527.79656"	"1527.79645"	"0.07"	"0.00005"	"5/128"	"5"	"128"	"99056.5848388672"	"HCD"	"MS2"	"9.879021"	"2.8"	"100.000"	"99.4110"	"34829"	"34829"	"34820"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.8"	""	""	""	"4.6"	""	"6.7"	""	"8.2"	"5.2"	""	"755"	"9"	"35.000"	"28.000"	"4.71972783907189"	"13"	"0.003507"	"0.03632"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40192"	"1527.79656"	"1527.79645"	"0.07"	"0.00005"	"5/128"	"5"	"128"	"111942.211669922"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"89.4993"	"31222"	"31222"	"31211"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.3"	""	"9.4"	""	"6.2"	""	"10.5"	""	"7.2"	"14.1"	""	"755"	"24"	"35.000"	"28.000"	"0.136746731902304"	"14"	"0.000936"	"0.01275"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40192"	"1527.79656"	"1527.79645"	"0.07"	"0.00005"	"4/128"	"4"	"128"	"127417.924255371"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"114.1594"	"39307"	"39307"	"39304"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.5"	""	"6.3"	""	"2.8"	""	"8.9"	""	"6.1"	"7.4"	""	"755"	"14"	"35.000"	"28.000"	"1.65545338410057"	"13"	"0.005309"	"0.05979"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40192"	"1527.79656"	"1527.79645"	"0.07"	"0.00005"	"6/128"	"6"	"128"	"115518.181213379"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"117.9081"	"39876"	"39876"	"39872"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.0"	""	""	""	"4.6"	""	"4.0"	""	"6.6"	"4.6"	""	"755"	"9"	"35.000"	"28.000"	"4.69804265943698"	"13"	"0.005119"	"0.05793"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40192"	"1527.79656"	"1527.79645"	"0.07"	"0.00005"	"4/128"	"4"	"128"	"132222.50567627"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"93.3599"	"32703"	"32703"	"32693"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.4"	""	"3.2"	""	"3.9"	""	"7.7"	""	"10.3"	"8.8"	""	"755"	"13"	"35.000"	"28.000"	"1.88763036953809"	"13"	"0.003581"	"0.03742"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40192"	"1527.79656"	"1527.79645"	"0.07"	"0.00005"	"4/128"	"4"	"128"	"136719.512268066"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"111.5737"	"38823"	"38823"	"38819"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.5"	""	"3.2"	""	"5.3"	""	"5.3"	""	"8.1"	"6.4"	""	"755"	"3"	"35.000"	"28.000"	"17.2550791579615"	"13"	"0.005369"	"0.06086"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"509.93704"	"1527.79657"	"1527.79645"	"0.08"	"0.00004"	"13/128"	"13"	"128"	"2149911.99407959"	"HCD"	"MS2"	"9.757765"	"35.2"	"100.000"	"63.3757"	"20734"	"20734"	"20715"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.9"	""	"35.7"	""	"42.5"	""	"37.9"	""	"116.2"	"67.3"	""	"755"	"68"	"35.000"	"28.000"	"6.09420355201998E-06"	"27"	"0"	"2.95E-06"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"509.93704"	"1527.79657"	"1527.79645"	"0.08"	"0.00004"	"18/128"	"18"	"128"	"276394393.557617"	"HCD"	"MS2"	"2.6459"	"108.5"	"5.471"	"60.4136"	"19537"	"19537"	"19532"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"130.1"	""	"97.7"	""	"119.3"	""	"226.1"	""	"234.6"	"223.9"	""	"755"	"77"	"35.000"	"28.000"	"8.25880013040958E-07"	"24"	"0"	"2.364E-07"	"1.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40198"	"1527.79668"	"1527.79645"	"0.15"	"0.00011"	"6/128"	"6"	"128"	"89760.7280273438"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"108.1902"	"37736"	"37736"	"37715"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.8"	""	"3.1"	""	"6.8"	""	"6.9"	""	"8.2"	"8.9"	""	"755"	"13"	"35.000"	"28.000"	"1.72550791579615"	"13"	"0.004022"	"0.04267"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"764.40198"	"1527.79668"	"1527.79645"	"0.15"	"0.00011"	"6/128"	"6"	"128"	"171539.223083496"	"HCD"	"MS2"	"33.1614"	"11.1"	"100.000"	"82.1957"	"28367"	"28367"	"28350"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.2"	""	"8.4"	""	"12.5"	""	"21.5"	""	"26.5"	"24.1"	""	"755"	"25"	"35.000"	"28.000"	"0.115589119621823"	"19"	"0.0002479"	"0.006051"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40198"	"1527.79668"	"1527.79645"	"0.15"	"0.00011"	"8/128"	"8"	"128"	"114741.788635254"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"90.1451"	"31473"	"31473"	"31456"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.6"	""	"5.3"	""	"4.8"	""	"10.6"	""	"10.4"	"9.2"	""	"755"	"15"	"35.000"	"28.000"	"1.28504091612128"	"13"	"0.001886"	"0.02106"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"764.40198"	"1527.79668"	"1527.79645"	"0.15"	"0.00011"	"6/128"	"6"	"128"	"156637.062561035"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"83.1062"	"28727"	"28727"	"28713"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.7"	""	"11.9"	""	"8.9"	""	"14.7"	""	"15.4"	"18.3"	""	"755"	"27"	"35.000"	"28.000"	"0.081267510485845"	"16"	"0.0006732"	"0.008267"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40198"	"1527.79668"	"1527.79645"	"0.15"	"0.00011"	"6/128"	"6"	"128"	"108914.675964355"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"118.6721"	"39984"	"39984"	"39981"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.7"	""	"3.2"	""	"3.6"	""	"4.0"	""	"7.6"	"8.1"	""	"755"	"12"	"35.000"	"28.000"	"2.30100178708164"	"13"	"0.004942"	"0.05375"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40198"	"1527.79668"	"1527.79645"	"0.15"	"0.00011"	"7/128"	"7"	"128"	"104324.012756348"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"113.3788"	"39171"	"39171"	"39169"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.7"	""	"3.0"	""	"3.3"	""	"6.0"	""	"7.5"	"6.4"	""	"755"	"3"	"35.000"	"28.000"	"21.1308494564404"	"13"	"0.008777"	"0.1135"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40198"	"1527.79668"	"1527.79645"	"0.15"	"0.00011"	"6/128"	"6"	"128"	"133153.055358887"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"111.3104"	"38767"	"38767"	"38764"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.5"	""	"4.5"	""	"5.2"	""	"7.8"	""	"7.6"	"6.3"	""	"755"	"11"	"35.000"	"28.000"	"3.3490139454433"	"13"	"0.003922"	"0.03932"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40198"	"1527.79668"	"1527.79645"	"0.15"	"0.00011"	"12/128"	"12"	"128"	"265294.415710449"	"HCD"	"MS2"	"7.30759"	"13.7"	"100.000"	"73.0314"	"24664"	"24664"	"24638"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.5"	""	"14.5"	""	"12.8"	""	"20.4"	""	"36.3"	"29.9"	""	"755"	"32"	"35.000"	"28.000"	"0.021573318534363"	"15"	"0.0004639"	"0.00755"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"764.40198"	"1527.79668"	"1527.79645"	"0.15"	"0.00011"	"14/128"	"14"	"128"	"189815.157409668"	"HCD"	"MS2"	"34.29288"	"11.1"	"100.000"	"82.1623"	"28351"	"28351"	"28336"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.6"	""	"13.0"	""	"9.3"	""	"19.9"	""	"26.7"	"24.2"	""	"755"	"34"	"35.000"	"28.000"	"0.0152376135845271"	"18"	"0"	"0.001168"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40198"	"1527.79668"	"1527.79645"	"0.15"	"0.00011"	"5/128"	"5"	"128"	"150235.269836426"	"HCD"	"MS2"	"7.253324"	"3.6"	"100.000"	"110.7359"	"38494"	"38494"	"38488"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.5"	""	"5.7"	""	"2.9"	""	"5.5"	""	"8.7"	"8.8"	""	"755"	"21"	"35.000"	"28.000"	"0.299858908608416"	"14"	"0.000936"	"0.01335"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40198"	"1527.79668"	"1527.79645"	"0.15"	"0.00011"	"11/128"	"11"	"128"	"402419.819091797"	"HCD"	"MS2"	"0"	"21.7"	"100.000"	"69.6897"	"23302"	"23302"	"23283"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.6"	""	"19.0"	""	"21.7"	""	"42.2"	"0.9"	"51.6"	"37.4"	""	"755"	"64"	"35.000"	"28.000"	"1.43521497111012E-05"	"17"	"0"	"2.692E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"764.40198"	"1527.79668"	"1527.79645"	"0.15"	"0.00011"	"18/128"	"18"	"128"	"419498.507141113"	"HCD"	"MS2"	"33.89083"	"17.7"	"100.000"	"70.8775"	"23800"	"23800"	"23779"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.7"	""	"18.4"	""	"23.7"	""	"29.0"	""	"34.7"	"39.7"	""	"755"	"43"	"35.000"	"28.000"	"0.00190071479817434"	"19"	"0"	"7.091E-05"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9298"	"0.0000"	"1"	"1"	"1"	"764.40198"	"1527.79668"	"1527.79645"	"0.15"	"0.00011"	"18/128"	"18"	"128"	"569867.920654297"	"HCD"	"MS2"	"3.487152"	"30.7"	"100.000"	"66.6807"	"22075"	"22075"	"22052"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.9"	""	"32.5"	""	"34.3"	""	"64.2"	""	"69.4"	"63.0"	""	"755"	"57"	"35.000"	"28.000"	"8.39299483720904E-05"	"20"	"0"	"1.937E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"509.93710"	"1527.79676"	"1527.79645"	"0.20"	"0.00010"	"13/128"	"13"	"128"	"2580823.31079102"	"HCD"	"MS2"	"72.07083"	"56.7"	"100.000"	"62.2144"	"20278"	"20278"	"20263"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.0"	""	"73.5"	""	"64.6"	""	"93.5"	""	"104.0"	"106.8"	""	"755"	"24"	"35.000"	"28.000"	"0.135181405006245"	"14"	"0"	"0.002123"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"509.93710"	"1527.79676"	"1527.79645"	"0.20"	"0.00010"	"10/128"	"10"	"128"	"4220170.51947021"	"HCD"	"MS2"	"68.47387"	"67.2"	"100.000"	"61.5773"	"20023"	"20023"	"20001"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.4"	""	"103.4"	""	"97.2"	""	"92.4"	""	"120.5"	"134.5"	""	"755"	"44"	"35.000"	"28.000"	"0.00138968687550056"	"18"	"0"	"0.0001208"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"764.40204"	"1527.79680"	"1527.79645"	"0.23"	"0.00017"	"5/128"	"5"	"128"	"84102.5600585938"	"HCD"	"MS2"	"11.07216"	"4.4"	"100.000"	"107.8298"	"37596"	"37596"	"37583"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.5"	""	"3.7"	""	"6.1"	""	"7.4"	""	"8.8"	"8.3"	""	"752"	"25"	"35.000"	"28.000"	"0.132491447511975"	"15"	"0.001211"	"0.01523"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"764.40204"	"1527.79680"	"1527.79645"	"0.23"	"0.00017"	"6/128"	"6"	"128"	"129814.807556152"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"82.4583"	"28469"	"28469"	"28454"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.9"	""	"8.7"	""	"7.4"	""	"16.5"	""	"18.4"	"13.5"	""	"752"	"28"	"35.000"	"28.000"	"0.0552316280394094"	"17"	"0.0003538"	"0.007331"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40204"	"1527.79680"	"1527.79645"	"0.23"	"0.00017"	"8/128"	"8"	"128"	"116036.182250977"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"85.4832"	"29660"	"29660"	"29651"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.1"	""	"5.5"	""	"9.4"	""	"11.4"	""	"16.3"	"11.3"	""	"752"	"17"	"35.000"	"28.000"	"0.771236979238413"	"14"	"0.002973"	"0.02887"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40204"	"1527.79680"	"1527.79645"	"0.23"	"0.00017"	"5/128"	"5"	"128"	"108407.335510254"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"117.1635"	"39608"	"39608"	"39606"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.3"	""	""	""	"3.3"	""	"5.8"	""	"6.6"	"7.0"	""	"752"	"13"	"35.000"	"28.000"	"1.9596921137551"	"13"	"0.003111"	"0.03125"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"764.40204"	"1527.79680"	"1527.79645"	"0.23"	"0.00017"	"6/128"	"6"	"128"	"142343.751403809"	"HCD"	"MS2"	"8.38681"	"8.3"	"100.000"	"83.6479"	"28937"	"28937"	"28925"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.0"	""	"8.1"	""	"9.0"	""	"18.5"	""	"14.9"	"16.2"	""	"752"	"27"	"35.000"	"28.000"	"0.08001802812895"	"16"	"0.0006732"	"0.008782"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"764.40204"	"1527.79680"	"1527.79645"	"0.23"	"0.00017"	"12/128"	"12"	"128"	"1047756.94647217"	"HCD"	"MS2"	"2.750146"	"48.1"	"100.000"	"64.3767"	"21156"	"21156"	"21135"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.2"	""	"50.5"	""	"54.8"	""	"93.5"	""	"98.1"	"88.5"	""	"752"	"68"	"35.000"	"28.000"	"5.40988265424198E-06"	"19"	"0"	"8.266E-08"	"1.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8904"	"0.0000"	"1"	"1"	"1"	"764.40204"	"1527.79680"	"1527.79645"	"0.23"	"0.00017"	"12/128"	"12"	"128"	"2329013.12738037"	"HCD"	"MS2"	"0"	"92.1"	"100.000"	"62.5882"	"20413"	"20413"	"20395"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"115.7"	""	"89.1"	""	"101.0"	""	"185.1"	""	"199.2"	"185.0"	""	"752"	"73"	"35.000"	"28.000"	"1.79138051038836E-06"	"25"	"0"	"2.733E-08"	"1.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9054"	"0.0000"	"1"	"1"	"1"	"764.40204"	"1527.79680"	"1527.79645"	"0.23"	"0.00017"	"11/128"	"11"	"128"	"7378630.84240723"	"HCD"	"MS2"	"0"	"271.5"	"100.000"	"61.0615"	"19812"	"19812"	"19794"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"341.1"	""	"270.8"	""	"291.8"	""	"542.6"	""	"580.5"	"557.3"	""	"752"	"74"	"35.000"	"28.000"	"1.50379225910173E-06"	"24"	"0"	"3.306E-08"	"1.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"509.93713"	"1527.79685"	"1527.79645"	"0.26"	"0.00013"	"17/128"	"17"	"128"	"82087899.3493652"	"HCD"	"MS2"	"9.52252"	"106.6"	"16.262"	"60.4747"	"19574"	"19574"	"19559"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"112.9"	""	"91.3"	""	"106.6"	""	"222.0"	""	"243.2"	"239.2"	""	"752"	"64"	"35.000"	"28.000"	"1.40989848844302E-05"	"20"	"0"	"8.483E-07"	"1.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40210"	"1527.79692"	"1527.79645"	"0.31"	"0.00024"	"3/128"	"3"	"128"	"78223.9456787109"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"95.0727"	"33328"	"33328"	"33315"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.8"	""	"6.7"	""	"3.2"	""	"7.0"	""	"10.0"	"7.3"	""	"754"	"6"	"35.000"	"28.000"	"8.53770903962584"	"13"	"0.006769"	"0.07918"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"764.40210"	"1527.79692"	"1527.79645"	"0.31"	"0.00024"	"4/128"	"4"	"128"	"86004.8768310547"	"HCD"	"MS2"	"22.25048"	"3.4"	"100.000"	"107.7699"	"37493"	"37493"	"37484"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.5"	""	"3.3"	""	"4.3"	""	"8.4"	""	"7.1"	"6.9"	""	"754"	"17"	"35.000"	"28.000"	"0.689193781485814"	"15"	"0.002379"	"0.02481"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40210"	"1527.79692"	"1527.79645"	"0.31"	"0.00024"	"7/128"	"7"	"128"	"106762.24786377"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"87.5210"	"30458"	"30458"	"30432"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.7"	""	"8.3"	""	"6.0"	""	"15.7"	""	"10.2"	"9.9"	""	"754"	"23"	"35.000"	"28.000"	"0.203864379750484"	"14"	"0.0006732"	"0.008912"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40210"	"1527.79692"	"1527.79645"	"0.31"	"0.00024"	"4/128"	"4"	"128"	"95161.0108032227"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"93.6399"	"32806"	"32806"	"32792"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.7"	""	"4.6"	""	"6.8"	""	"9.1"	""	"9.6"	"8.8"	""	"754"	"16"	"35.000"	"28.000"	"0.962368391103291"	"13"	"0.001886"	"0.02148"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40210"	"1527.79692"	"1527.79645"	"0.31"	"0.00024"	"7/128"	"7"	"128"	"102593.993164063"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"115.0789"	"39309"	"39309"	"39306"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.0"	""	"5.0"	""	"3.9"	""	"8.4"	""	"6.0"	"6.9"	""	"754"	"6"	"35.000"	"28.000"	"8.6365710509345"	"13"	"0.004867"	"0.05234"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40210"	"1527.79692"	"1527.79645"	"0.31"	"0.00024"	"17/128"	"17"	"128"	"400459.059692383"	"HCD"	"MS2"	"0"	"21.1"	"100.000"	"70.5759"	"23677"	"23677"	"23656"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.6"	""	"23.2"	""	"24.5"	""	"37.0"	""	"42.4"	"45.0"	""	"754"	"54"	"35.000"	"28.000"	"0.000158979581792576"	"16"	"0"	"0.0002709"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"764.40210"	"1527.79692"	"1527.79645"	"0.31"	"0.00024"	"12/128"	"12"	"128"	"1929404.84942627"	"HCD"	"MS2"	"0"	"80.6"	"100.000"	"62.8923"	"20538"	"20538"	"20522"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"101.3"	""	"83.2"	""	"91.4"	""	"159.4"	""	"162.8"	"167.6"	""	"754"	"75"	"35.000"	"28.000"	"1.14377697644124E-06"	"24"	"0"	"4.895E-08"	"1.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40216"	"1527.79704"	"1527.79645"	"0.39"	"0.00030"	"5/128"	"5"	"128"	"81844.8456420898"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"93.9667"	"32923"	"32923"	"32912"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.5"	""	"6.1"	""	"5.8"	""	"8.0"	""	"8.5"	"12.4"	""	"759"	"13"	"35.000"	"28.000"	"1.75070019545664"	"13"	"0.001465"	"0.01835"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"764.40216"	"1527.79704"	"1527.79645"	"0.39"	"0.00030"	"6/128"	"6"	"128"	"122691.258056641"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"86.9856"	"30253"	"30253"	"30231"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.5"	""	"8.5"	""	"9.2"	""	"12.9"	""	"11.0"	"12.6"	""	"759"	"40"	"35.000"	"28.000"	"0.00394649702932128"	"20"	"0"	"0.002317"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40216"	"1527.79704"	"1527.79645"	"0.39"	"0.00030"	"5/128"	"5"	"128"	"120353.758789063"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"116.9082"	"39570"	"39570"	"39567"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.9"	""	"3.7"	""	"6.6"	""	"6.9"	""	"11.0"	"7.5"	""	"759"	"22"	"35.000"	"28.000"	"0.224497640169592"	"14"	"0.001134"	"0.01389"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40216"	"1527.79704"	"1527.79645"	"0.39"	"0.00030"	"7/128"	"7"	"128"	"154705.840637207"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"89.7751"	"31332"	"31332"	"31317"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.1"	""	"8.1"	""	"9.7"	""	"8.0"	""	"11.6"	"12.6"	""	"759"	"8"	"35.000"	"28.000"	"5.4351530777431"	"13"	"0.00447"	"0.04853"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9649"	"0.0000"	"1"	"1"	"1"	"764.40216"	"1527.79704"	"1527.79645"	"0.39"	"0.00030"	"15/128"	"15"	"128"	"495528.887451172"	"HCD"	"MS2"	"5.387743"	"27.0"	"100.000"	"68.1339"	"22667"	"22667"	"22647"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.4"	""	"31.8"	""	"32.9"	""	"52.1"	""	"52.7"	"53.6"	""	"759"	"57"	"35.000"	"28.000"	"8.18864003273437E-05"	"18"	"0"	"1.301E-05"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40216"	"1527.79704"	"1527.79645"	"0.39"	"0.00030"	"8/128"	"8"	"128"	"1052350.38134766"	"HCD"	"MS2"	"24.1128"	"56.6"	"100.000"	"55.9834"	"17761"	"17761"	"17741"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.8"	""	"60.8"	""	"68.4"	""	"119.1"	"0.8"	"123.3"	"99.1"	""	"759"	"50"	"35.000"	"28.000"	"0.000423849602532723"	"16"	"0"	"8.3E-05"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9839"	"0.0000"	"1"	"1"	"1"	"764.40216"	"1527.79704"	"1527.79645"	"0.39"	"0.00030"	"12/128"	"12"	"128"	"4949585.45330811"	"HCD"	"MS2"	"36.89654"	"191.4"	"100.000"	"61.6852"	"20067"	"20067"	"20049"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"277.9"	""	"194.3"	""	"238.2"	""	"342.6"	""	"373.6"	"391.4"	""	"759"	"62"	"35.000"	"28.000"	"2.50733163518883E-05"	"17"	"0"	"6.35E-08"	"1.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40222"	"1527.79717"	"1527.79645"	"0.47"	"0.00036"	"5/128"	"5"	"128"	"87539.7965698242"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"107.5553"	"37490"	"37490"	"37476"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.4"	""	"3.2"	""	"6.3"	""	"10.1"	""	"7.2"	"10.1"	""	"759"	"9"	"35.000"	"28.000"	"4.92279533338411"	"13"	"0.002547"	"0.02541"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"764.40222"	"1527.79717"	"1527.79645"	"0.47"	"0.00036"	"8/128"	"8"	"128"	"137737.77722168"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"82.5097"	"28493"	"28493"	"28469"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.7"	""	"8.9"	""	"6.7"	""	"17.5"	""	"14.7"	"14.7"	""	"759"	"26"	"35.000"	"28.000"	"0.0968750144359943"	"17"	"0.000936"	"0.0131"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40222"	"1527.79717"	"1527.79645"	"0.47"	"0.00036"	"5/128"	"5"	"128"	"103530.182617188"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"114.0602"	"39145"	"39145"	"39143"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.8"	""	"3.6"	""	"4.7"	""	"5.3"	""	"7.5"	"7.8"	""	"759"	"3"	"35.000"	"28.000"	"17.3464967958845"	"13"	"0.006574"	"0.07386"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"764.40222"	"1527.79717"	"1527.79645"	"0.47"	"0.00036"	"7/128"	"7"	"128"	"117862.198913574"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"87.2985"	"30376"	"30376"	"30360"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.0"	""	"4.9"	""	"6.0"	""	"11.5"	""	"9.2"	"12.2"	""	"759"	"12"	"35.000"	"28.000"	"2.23981309925215"	"17"	"0.002871"	"0.02702"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9661"	"0.0000"	"1"	"1"	"1"	"764.40222"	"1527.79717"	"1527.79645"	"0.47"	"0.00036"	"15/128"	"15"	"128"	"262878.16394043"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"75.7779"	"25783"	"25783"	"25763"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.9"	""	"11.3"	""	"12.5"	""	"26.3"	""	"35.5"	"29.0"	""	"759"	"59"	"35.000"	"28.000"	"4.30736604547643E-05"	"18"	"0"	"0.0003131"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"764.40222"	"1527.79717"	"1527.79645"	"0.47"	"0.00036"	"12/128"	"12"	"128"	"983043904.921875"	"HCD"	"MS2"	"0"	"217.3"	"0.655"	"60.0900"	"19422"	"19422"	"19417"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"275.9"	""	"200.9"	""	"228.9"	""	"436.8"	""	"466.0"	"457.2"	""	"759"	"76"	"35.000"	"28.000"	"9.23021421443513E-07"	"21"	"0"	"2.537E-07"	"1.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40228"	"1527.79729"	"1527.79645"	"0.55"	"0.00042"	"5/128"	"5"	"128"	"67731.7367553711"	"HCD"	"MS2"	"12.08433"	"3.7"	"100.000"	"98.5568"	"34557"	"34557"	"34547"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.6"	""	"6.0"	""	"3.7"	""	"8.5"	""	"6.0"	"9.0"	""	"771"	"22"	"35.000"	"28.000"	"0.261833000373925"	"14"	"0.00447"	"0.04715"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40228"	"1527.79729"	"1527.79645"	"0.55"	"0.00042"	"5/128"	"5"	"128"	"73840.9201660156"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"102.2097"	"35740"	"35740"	"35735"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.5"	""	""	""	"4.5"	""	"5.3"	""	"6.2"	"4.8"	""	"771"	"8"	"35.000"	"28.000"	"5.54656851917628"	"13"	"0.003507"	"0.03689"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40228"	"1527.79729"	"1527.79645"	"0.55"	"0.00042"	"6/128"	"6"	"128"	"104023.654052734"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"87.9169"	"30619"	"30619"	"30603"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.9"	""	"8.9"	""	"7.3"	""	"11.8"	""	"9.0"	"14.4"	""	"771"	"25"	"35.000"	"28.000"	"0.116956505150689"	"14"	"0.0003538"	"0.006637"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"764.40228"	"1527.79729"	"1527.79645"	"0.55"	"0.00042"	"7/128"	"7"	"128"	"105096.105224609"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"90.4563"	"31591"	"31591"	"31575"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.1"	""	"7.0"	""	"7.5"	""	"8.9"	""	"13.1"	"12.6"	""	"771"	"23"	"35.000"	"28.000"	"0.210389655450685"	"18"	"0.001546"	"0.01875"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40228"	"1527.79729"	"1527.79645"	"0.55"	"0.00042"	"8/128"	"8"	"128"	"280372.967407227"	"HCD"	"MS2"	"16.62354"	"16.8"	"100.000"	"75.2055"	"25541"	"25541"	"25520"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.7"	""	"17.2"	""	"24.7"	""	"28.3"	""	"33.2"	"34.7"	""	"771"	"26"	"35.000"	"28.000"	"0.107404971050678"	"14"	"0.0008629"	"0.0106"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40228"	"1527.79729"	"1527.79645"	"0.55"	"0.00042"	"11/128"	"11"	"128"	"420493.012145996"	"HCD"	"MS2"	"0"	"22.5"	"100.000"	"69.5080"	"23242"	"23242"	"23224"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.5"	""	"23.9"	""	"29.1"	""	"39.8"	""	"50.5"	"42.1"	""	"771"	"60"	"35.000"	"28.000"	"4.23666751101237E-05"	"16"	"0"	"7.705E-06"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9467"	"0.0000"	"1"	"1"	"1"	"509.93729"	"1527.79731"	"1527.79645"	"0.56"	"0.00029"	"18/128"	"18"	"128"	"258593208.411621"	"HCD"	"MS2"	"2.29719"	"128.0"	"7.269"	"60.1976"	"19464"	"19464"	"19452"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"152.2"	""	"113.6"	""	"141.3"	""	"263.1"	"0.7"	"279.1"	"266.7"	""	"771"	"75"	"35.000"	"28.000"	"1.27357458069692E-06"	"21"	"0"	"2.332E-07"	"1.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40234"	"1527.79741"	"1527.79645"	"0.63"	"0.00048"	"5/128"	"5"	"128"	"75216.9857788086"	"HCD"	"MS2"	"19.91757"	"4.6"	"100.000"	"106.7628"	"37121"	"37121"	"37110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.0"	""	"6.5"	""	"6.1"	""	"6.3"	""	"6.9"	"8.2"	""	"769"	"9"	"35.000"	"28.000"	"4.42482749549135"	"13"	"0.003507"	"0.03572"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40234"	"1527.79741"	"1527.79645"	"0.63"	"0.00048"	"5/128"	"5"	"128"	"76511.5193481445"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"98.8319"	"34653"	"34653"	"34647"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.3"	""	"3.5"	""	"2.5"	""	"5.8"	""	"6.5"	"7.3"	""	"769"	"10"	"35.000"	"28.000"	"4.00771051601725"	"13"	"0.00447"	"0.0469"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40234"	"1527.79741"	"1527.79645"	"0.63"	"0.00048"	"4/128"	"4"	"128"	"97079.701965332"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"119.6879"	"40137"	"40137"	"40135"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	""	""	"4.0"	""	"4.7"	""	"6.5"	"9.0"	""	"769"	"6"	"35.000"	"28.000"	"9.07603880657931"	"13"	"0.007602"	"0.0902"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"764.40234"	"1527.79741"	"1527.79645"	"0.63"	"0.00048"	"13/128"	"13"	"128"	"286607.989562988"	"HCD"	"MS2"	"31.83183"	"18.6"	"100.000"	"74.8944"	"25415"	"25415"	"25397"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.2"	""	"23.3"	""	"21.0"	""	"32.5"	""	"37.3"	"38.7"	""	"769"	"21"	"35.000"	"28.000"	"0.328016993839763"	"19"	"0.001978"	"0.02201"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"764.40234"	"1527.79741"	"1527.79645"	"0.63"	"0.00048"	"11/128"	"11"	"128"	"1394927.25445557"	"HCD"	"MS2"	"40.944"	"67.9"	"100.000"	"59.2768"	"19119"	"19119"	"19094"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"111.4"	""	"81.1"	""	"84.8"	""	"103.1"	"0.1"	"134.3"	"128.5"	""	"769"	"34"	"35.000"	"28.000"	"0.0155559430357667"	"24"	"0"	"2.597E-06"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9054"	"0.0000"	"1"	"1"	"1"	"764.40234"	"1527.79741"	"1527.79645"	"0.63"	"0.00048"	"11/128"	"11"	"128"	"12758105.744873"	"HCD"	"MS2"	"0"	"268.8"	"59.044"	"61.0657"	"19799"	"19799"	"19782"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"327.6"	""	"304.3"	""	"300.1"	""	"531.1"	""	"563.4"	"529.7"	""	"769"	"74"	"35.000"	"28.000"	"1.54133252927698E-06"	"24"	"0"	"2.049E-07"	"1.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"764.40234"	"1527.79741"	"1527.79645"	"0.63"	"0.00048"	"11/128"	"11"	"128"	"6574252.71160889"	"HCD"	"MS2"	"0"	"135.8"	"100.000"	"61.3673"	"19922"	"19922"	"19905"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"176.0"	""	"131.6"	""	"157.7"	""	"269.4"	""	"294.4"	"263.5"	""	"769"	"72"	"35.000"	"28.000"	"2.45412310440265E-06"	"23"	"0"	"1.32E-07"	"1.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"509.93732"	"1527.79740"	"1527.79645"	"0.62"	"0.00032"	"13/128"	"13"	"128"	"3679873.84088135"	"HCD"	"MS2"	"37.85013"	"58.2"	"100.000"	"61.7653"	"20084"	"20084"	"20065"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.6"	""	"79.3"	""	"89.7"	""	"76.7"	""	"104.6"	"129.7"	""	"769"	"32"	"35.000"	"28.000"	"0.022176670517432"	"19"	"0"	"2.429E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"764.40240"	"1527.79753"	"1527.79645"	"0.71"	"0.00054"	"5/128"	"5"	"128"	"104947.426086426"	"HCD"	"MS2"	"39.95607"	"4.1"	"100.000"	"103.6968"	"36080"	"36080"	"36075"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.0"	""	"4.3"	""	"8.2"	""	"5.6"	""	"4.7"	"6.7"	""	"770"	"2"	"35.000"	"28.000"	"21.7000497492992"	"13"	"0.00447"	"0.04886"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"764.40240"	"1527.79753"	"1527.79645"	"0.71"	"0.00054"	"6/128"	"6"	"128"	"127400.37512207"	"HCD"	"MS2"	"10.00587"	"5.7"	"100.000"	"86.5640"	"30086"	"30086"	"30072"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.6"	""	"5.6"	""	"5.8"	""	"13.6"	""	"11.0"	"6.9"	""	"770"	"29"	"35.000"	"28.000"	"0.0538841119190458"	"19"	"0.0002479"	"0.005362"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40240"	"1527.79753"	"1527.79645"	"0.71"	"0.00054"	"5/128"	"5"	"128"	"142429.400695801"	"HCD"	"MS2"	"13.57132"	"4.0"	"100.000"	"97.7960"	"34300"	"34300"	"34293"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.0"	""	"3.2"	""	"6.2"	""	"7.9"	""	"7.4"	"8.3"	""	"770"	"13"	"35.000"	"28.000"	"1.90309614489931"	"13"	"0.004817"	"0.05109"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40240"	"1527.79753"	"1527.79645"	"0.71"	"0.00054"	"7/128"	"7"	"128"	"140593.595336914"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"96.9341"	"34011"	"34011"	"34007"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.1"	""	"5.2"	""	"4.1"	""	"9.5"	""	"6.8"	"6.4"	""	"770"	"12"	"35.000"	"28.000"	"2.24109738841785"	"13"	"0.003967"	"0.04218"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"764.40240"	"1527.79753"	"1527.79645"	"0.71"	"0.00054"	"12/128"	"12"	"128"	"2682550.54663086"	"HCD"	"MS2"	"0"	"97.5"	"100.000"	"62.2968"	"20295"	"20295"	"20284"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"116.5"	""	"96.1"	""	"116.5"	""	"189.3"	""	"208.4"	"201.7"	""	"770"	"74"	"35.000"	"28.000"	"1.50473744880075E-06"	"23"	"0"	"7.819E-08"	"1.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9467"	"0.0000"	"1"	"1"	"1"	"764.40240"	"1527.79753"	"1527.79645"	"0.71"	"0.00054"	"12/128"	"12"	"128"	"1234107769.5"	"HCD"	"MS2"	"0.04650041"	"392.7"	"0.892"	"59.5550"	"19233"	"19233"	"19218"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"502.0"	""	"409.6"	""	"423.1"	""	"792.5"	"4.7"	"836.6"	"760.6"	""	"770"	"75"	"35.000"	"28.000"	"1.23157461723119E-06"	"21"	"0"	"2.979E-07"	"1.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9067"	"0.0000"	"1"	"1"	"1"	"764.40247"	"1527.79766"	"1527.79645"	"0.79"	"0.00060"	"11/128"	"11"	"128"	"3410435.38336182"	"HCD"	"MS2"	"0"	"137.9"	"100.000"	"61.9944"	"20176"	"20176"	"20165"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"179.4"	""	"133.3"	""	"154.6"	""	"270.4"	""	"299.5"	"272.6"	""	"768"	"75"	"35.000"	"28.000"	"1.21431462150466E-06"	"24"	"0"	"1.317E-07"	"1.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"764.40247"	"1527.79766"	"1527.79645"	"0.79"	"0.00060"	"12/128"	"12"	"128"	"5977206.82745361"	"HCD"	"MS2"	"34.10131"	"236.9"	"100.000"	"61.6871"	"20052"	"20052"	"20033"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"339.4"	""	"258.7"	""	"298.1"	""	"427.3"	"0.4"	"439.8"	"482.7"	""	"768"	"60"	"35.000"	"28.000"	"3.69259114899327E-05"	"20"	"0"	"2.397E-07"	"1.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"509.93741"	"1527.79767"	"1527.79645"	"0.80"	"0.00041"	"15/128"	"15"	"128"	"1830566.29803467"	"HCD"	"MS2"	"14.92184"	"28.5"	"100.000"	"62.0700"	"20206"	"20206"	"20195"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.0"	""	"38.0"	""	"34.7"	""	"45.5"	""	"58.2"	"62.4"	""	"768"	"57"	"35.000"	"28.000"	"7.23321250364083E-05"	"25"	"0"	"1.094E-05"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"764.40259"	"1527.79790"	"1527.79645"	"0.95"	"0.00072"	"12/128"	"12"	"128"	"2072688.49279785"	"HCD"	"MS2"	"0"	"85.7"	"100.000"	"62.6026"	"20435"	"20435"	"20417"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.3"	""	"84.0"	""	"106.3"	""	"162.8"	""	"173.9"	"174.7"	""	"767"	"69"	"35.000"	"28.000"	"5.25733157324222E-06"	"23"	"0"	"4.682E-07"	"1.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"764.40259"	"1527.79790"	"1527.79645"	"0.95"	"0.00072"	"11/128"	"11"	"128"	"951141445.875"	"HCD"	"MS2"	"0"	"190.3"	"0.508"	"59.9076"	"19358"	"19358"	"19355"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"219.5"	"2.8"	"183.3"	""	"217.9"	""	"376.5"	""	"428.7"	"384.8"	""	"767"	"39"	"35.000"	"28.000"	"0.0051258438059556"	"16"	"0"	"8.293E-06"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"764.40265"	"1527.79802"	"1527.79645"	"1.03"	"0.00079"	"6/128"	"6"	"128"	"86408.3594360352"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"93.1508"	"32639"	"32639"	"32623"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.7"	""	"4.0"	""	"6.4"	""	"10.1"	""	"10.0"	"10.0"	""	"732"	"10"	"35.000"	"28.000"	"3.48723396032656"	"14"	"0.003507"	"0.03572"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40265"	"1527.79802"	"1527.79645"	"1.03"	"0.00079"	"4/128"	"4"	"128"	"86534.5377807617"	"HCD"	"MS2"	"21.38408"	"4.6"	"100.000"	"95.5802"	"33527"	"33527"	"33516"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.2"	""	"4.0"	""	"5.2"	""	"8.0"	""	"8.9"	"10.6"	""	"732"	"14"	"35.000"	"28.000"	"1.61243080043398"	"13"	"0.002547"	"0.02504"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40265"	"1527.79802"	"1527.79645"	"1.03"	"0.00079"	"4/128"	"4"	"128"	"86369.6315307617"	"HCD"	"MS2"	"7.342514"	"3.5"	"100.000"	"97.5281"	"34202"	"34202"	"34198"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.3"	""	"3.0"	""	"5.0"	""	"3.5"	""	"9.6"	"7.0"	""	"732"	"6"	"35.000"	"28.000"	"9.56051055710109"	"13"	"0.005067"	"0.05706"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40265"	"1527.79802"	"1527.79645"	"1.03"	"0.00079"	"4/128"	"4"	"128"	"103039.682617188"	"HCD"	"MS2"	"20.81634"	"4.7"	"100.000"	"97.4395"	"34154"	"34154"	"34146"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.2"	""	"5.6"	""	"7.9"	""	"10.1"	""	"8.0"	"6.6"	""	"732"	"11"	"35.000"	"28.000"	"2.74461280615678"	"13"	"0.005309"	"0.06016"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9481"	"0.0000"	"1"	"1"	"1"	"764.40265"	"1527.79802"	"1527.79645"	"1.03"	"0.00079"	"11/128"	"11"	"128"	"1401980319.51563"	"HCD"	"MS2"	"0"	"240.9"	"0.492"	"59.8274"	"19326"	"19326"	"19319"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"315.9"	""	"232.4"	""	"260.9"	""	"471.0"	"1.9"	"513.1"	"492.9"	""	"732"	"77"	"35.000"	"28.000"	"7.45557400440292E-07"	"21"	"0"	"9.248E-07"	"1.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"764.40271"	"1527.79814"	"1527.79645"	"1.11"	"0.00085"	"6/128"	"6"	"128"	"114123.280517578"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"82.7794"	"28598"	"28598"	"28581"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.1"	""	"7.6"	""	"4.7"	""	"14.0"	""	"16.5"	"12.7"	""	"734"	"30"	"35.000"	"28.000"	"0.0380772928605211"	"21"	"0.0004639"	"0.007581"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"764.40271"	"1527.79814"	"1527.79645"	"1.11"	"0.00085"	"10/128"	"10"	"128"	"398089.21484375"	"HCD"	"MS2"	"19.02113"	"22.4"	"100.000"	"71.5401"	"24057"	"24057"	"24040"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.7"	""	"20.2"	""	"32.2"	""	"32.7"	"1.0"	"50.3"	"43.4"	""	"734"	"49"	"35.000"	"28.000"	"0.000464158239521913"	"24"	"0"	"0.000428"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"764.40277"	"1527.79827"	"1527.79645"	"1.19"	"0.00091"	"4/128"	"4"	"128"	"76251.5581054688"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"105.6990"	"36796"	"36796"	"36784"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.7"	""	"5.4"	""	"4.1"	""	"11.9"	""	"7.0"	"4.3"	""	"734"	"2"	"35.000"	"28.000"	"23.5866392255346"	"13"	"0.006769"	"0.07761"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40277"	"1527.79827"	"1527.79645"	"1.19"	"0.00091"	"5/128"	"5"	"128"	"120081.049316406"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"89.8254"	"31350"	"31350"	"31338"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.6"	""	"10.8"	""	"11.5"	""	"12.2"	""	"14.3"	"10.5"	""	"734"	"19"	"35.000"	"28.000"	"0.471700204199307"	"14"	"0.002937"	"0.02779"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9057"	"0.0000"	"1"	"1"	"1"	"764.40277"	"1527.79827"	"1527.79645"	"1.19"	"0.00091"	"15/128"	"15"	"128"	"1966172.49121094"	"HCD"	"MS2"	"31.22833"	"90.6"	"100.000"	"59.5369"	"19210"	"19210"	"19190"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"139.2"	""	"105.4"	""	"104.5"	""	"173.2"	"3.7"	"172.0"	"161.0"	""	"734"	"53"	"35.000"	"28.000"	"0.000168914162504358"	"21"	"0"	"5.241E-07"	"1.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"764.40277"	"1527.79827"	"1527.79645"	"1.19"	"0.00091"	"11/128"	"11"	"128"	"22159774.4500732"	"HCD"	"MS2"	"0"	"258.0"	"34.678"	"60.7600"	"19690"	"19690"	"19673"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"315.7"	""	"266.2"	""	"279.1"	""	"511.0"	"1.1"	"565.4"	"513.0"	""	"734"	"75"	"35.000"	"28.000"	"1.09311552960051E-06"	"22"	"0"	"2.755E-07"	"1.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9067"	"0.0000"	"1"	"1"	"1"	"764.40277"	"1527.79827"	"1527.79645"	"1.19"	"0.00091"	"11/128"	"11"	"128"	"112257584.699219"	"HCD"	"MS2"	"0.03854729"	"245.2"	"6.219"	"60.7619"	"19675"	"19675"	"19670"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"308.8"	""	"237.2"	""	"286.5"	""	"474.4"	"0.9"	"517.9"	"503.4"	""	"734"	"75"	"35.000"	"28.000"	"1.10323000306456E-06"	"24"	"0"	"6.519E-08"	"1.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"764.40295"	"1527.79863"	"1527.79645"	"1.43"	"0.00109"	"13/128"	"13"	"128"	"354017.600463867"	"HCD"	"MS2"	"0"	"30.1"	"100.000"	"54.5504"	"17179"	"17179"	"17152"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.6"	""	"36.9"	""	"40.8"	""	"50.2"	"1.2"	"50.6"	"64.2"	""	"741"	"16"	"35.000"	"28.000"	"0.932799301734656"	"19"	"0.003653"	"0.03755"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40302"	"1527.79875"	"1527.79645"	"1.51"	"0.00115"	"12/128"	"12"	"128"	"214106.18548584"	"HCD"	"MS2"	"7.561361"	"13.8"	"100.000"	"75.9588"	"25847"	"25847"	"25823"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.5"	""	"14.2"	""	"12.1"	""	"29.8"	"1.1"	"31.2"	"26.1"	""	"741"	"32"	"35.000"	"28.000"	"0.0242542702491925"	"15"	"0.0003538"	"0.007226"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"764.40302"	"1527.79875"	"1527.79645"	"1.51"	"0.00115"	"11/128"	"11"	"128"	"1269373882.28906"	"HCD"	"MS2"	"0"	"250.9"	"0.548"	"60.1005"	"19420"	"19420"	"19413"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"327.6"	""	"257.9"	""	"272.9"	""	"486.5"	"1.8"	"520.9"	"515.0"	""	"741"	"74"	"35.000"	"28.000"	"1.54094881188035E-06"	"21"	"0"	"1.118E-06"	"1.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40308"	"1527.79888"	"1527.79645"	"1.59"	"0.00121"	"5/128"	"5"	"128"	"103901.982177734"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"89.4865"	"31218"	"31218"	"31205"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.6"	""	"4.9"	""	"8.3"	""	"15.3"	""	"15.8"	"11.3"	""	"738"	"26"	"35.000"	"28.000"	"0.0926886093227035"	"14"	"0.0005778"	"0.008113"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9605"	"0.0000"	"1"	"1"	"1"	"764.40314"	"1527.79900"	"1527.79645"	"1.67"	"0.00127"	"12/128"	"12"	"128"	"1476646489.39063"	"HCD"	"MS2"	"0"	"300.7"	"0.586"	"59.8284"	"19329"	"19329"	"19320"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"407.6"	""	"298.5"	""	"329.8"	""	"595.9"	"3.2"	"630.8"	"589.0"	""	"738"	"76"	"35.000"	"28.000"	"9.0370433624071E-07"	"21"	"0"	"1.045E-07"	"1.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"764.40320"	"1527.79912"	"1527.79645"	"1.75"	"0.00133"	"19/128"	"19"	"128"	"371011.359619141"	"HCD"	"MS2"	"14.29982"	"30.3"	"100.000"	"54.3069"	"17094"	"17094"	"17065"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.4"	""	"32.9"	""	"42.6"	""	"53.3"	""	"60.2"	"61.0"	""	"738"	"48"	"35.000"	"28.000"	"0.00058617375023258"	"18"	"0"	"7.91E-05"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40320"	"1527.79912"	"1527.79645"	"1.75"	"0.00133"	"9/128"	"9"	"128"	"34668672.3887329"	"HCD"	"MS2"	"0"	"1305.4"	"100.000"	"59.8655"	"19339"	"19339"	"19334"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1300.3"	""	"1370.2"	""	"1495.0"	""	"2618.4"	""	"3117.0"	"2536.6"	""	"738"	"11"	"35.000"	"28.000"	"3.19173162028231"	"13"	"0"	"0.002031"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9605"	"0.0000"	"1"	"1"	"1"	"764.40381"	"1527.80034"	"1527.79645"	"2.55"	"0.00194"	"11/128"	"11"	"128"	"2421534.42858887"	"HCD"	"MS2"	"0"	"96.0"	"100.000"	"62.3107"	"20316"	"20316"	"20307"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"120.8"	""	"105.7"	""	"102.0"	""	"193.3"	""	"203.8"	"187.0"	""	"731"	"76"	"35.000"	"28.000"	"8.56815631999431E-07"	"20"	"0"	"1.414E-07"	"1.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"764.40424"	"1527.80120"	"1527.79645"	"3.11"	"0.00237"	"12/128"	"12"	"128"	"211128241.849609"	"HCD"	"MS2"	"0"	"288.6"	"3.950"	"60.4703"	"19573"	"19573"	"19559"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"345.2"	""	"270.9"	""	"313.5"	""	"578.1"	""	"629.7"	"608.1"	""	"735"	"74"	"35.000"	"28.000"	"1.41663296442171E-06"	"23"	"0"	"2.837E-07"	"1.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"764.40472"	"1527.80217"	"1527.79645"	"3.74"	"0.00286"	"12/128"	"12"	"128"	"537024822.453125"	"HCD"	"MS2"	"0.02060489"	"296.9"	"1.656"	"60.4960"	"19569"	"19569"	"19560"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"358.1"	""	"271.2"	""	"318.9"	""	"614.2"	"5.9"	"643.9"	"609.5"	""	"725"	"75"	"35.000"	"28.000"	"1.16227263013323E-06"	"23"	"0"	"3.795E-07"	"1.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPQELNGITR"	"[K].vGDPQELNGITR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"509.94791"	"1527.82917"	"1527.83284"	"-2.40"	"-0.00122"	"10/118"	"10"	"118"	"2502248.83782959"	"HCD"	"MS2"	"60.28895"	"40.9"	"100.000"	"61.8547"	"20121"	"20121"	"20097"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.0"	""	"40.2"	""	"58.5"	""	"65.3"	"1.7"	"80.5"	"89.6"	""	"808"	"12"	"36.000"	"29.000"	"2.59645837796076"	"17"	"0.0001301"	"0.004874"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIREETVPLR"	"[K].eGIREETVPLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"1"	"3"	"3"	"0.8846"	"0.0000"	"1"	"1"	"1"	"509.96078"	"1527.86780"	"1527.86922"	"-0.93"	"-0.00047"	"7/106"	"7"	"106"	"6105717.00830078"	"HCD"	"MS2"	"4.556654"	"129.2"	"100.000"	"43.4242"	"12665"	"12665"	"12649"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"172.3"	""	"153.0"	""	"187.5"	""	"216.2"	"0.5"	"238.6"	"256.5"	""	"703"	"26"	"35.000"	"28.000"	"0.0954828402996937"	"17"	"0"	"0.001853"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIREETVPLR"	"[K].eGIREETVPLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"1"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"509.96112"	"1527.86881"	"1527.86922"	"-0.27"	"-0.00014"	"15/106"	"15"	"106"	"6447688.98773193"	"HCD"	"MS2"	"4.666013"	"128.6"	"100.000"	"43.5304"	"12698"	"12698"	"12682"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"191.1"	"2.6"	"152.6"	""	"166.8"	""	"216.7"	"1.6"	"237.7"	"250.2"	""	"702"	"22"	"35.000"	"28.000"	"0.24451590645288"	"17"	"0"	"0.001842"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVMIDEDMTAR"	"[R].sVmIDEDmTAR.[I]"	"N-Term(TMT6plex); M3(Oxidation); M8(Oxidation)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.86249"	"1528.71770"	"1528.71846"	"-0.50"	"-0.00038"	"11/96"	"11"	"96"	"167707.404907227"	"HCD"	"MS2"	"0"	"11.7"	"100.000"	"40.8188"	"11594"	"11594"	"11573"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.9"	""	"15.7"	""	"11.6"	""	"21.6"	""	"24.3"	"29.6"	""	"375"	"16"	"32.000"	"25.000"	"0.524808997431443"	"13"	"0.004817"	"0.05091"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vnPDDVGGEALGR.[L]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"510.26196"	"1528.77134"	"1528.78047"	"-5.97"	"-0.00304"	"13/128"	"13"	"128"	"1814502.52563477"	"HCD"	"MS2"	"25.78894"	"32.4"	"100.000"	"64.7982"	"21309"	"21309"	"21287"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.7"	""	"47.6"	""	"42.5"	""	"53.8"	""	"59.4"	"57.5"	""	"617"	"39"	"34.000"	"27.000"	"0.00373469524200323"	"18"	"0"	"0.0001546"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vnPDDVGGEALGR.[L]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"510.26306"	"1528.77463"	"1528.78047"	"-3.82"	"-0.00195"	"10/128"	"10"	"128"	"541003.591369629"	"HCD"	"MS2"	"39.32674"	"17.5"	"100.000"	"64.9479"	"21385"	"21385"	"21358"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.2"	""	"19.0"	""	"27.4"	""	"22.8"	""	"35.9"	"38.3"	""	"620"	"20"	"34.000"	"27.000"	"0.342264372169643"	"14"	"0.001211"	"0.01416"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vnPDDVGGEALGR.[L]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8986"	"0.0000"	"1"	"1"	"1"	"764.89227"	"1528.77727"	"1528.78047"	"-2.09"	"-0.00160"	"9/128"	"9"	"128"	"2474347.91278076"	"HCD"	"MS2"	"0"	"98.9"	"100.000"	"64.6050"	"21249"	"21249"	"21231"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"142.1"	""	"114.7"	""	"126.2"	""	"181.7"	""	"202.1"	"171.1"	""	"651"	"69"	"35.000"	"28.000"	"3.88643128003121E-06"	"24"	"0"	"2.563E-07"	"1.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vnPDDVGGEALGR.[L]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"764.89264"	"1528.77800"	"1528.78047"	"-1.61"	"-0.00123"	"11/128"	"11"	"128"	"1676612.57965088"	"HCD"	"MS2"	"0"	"75.7"	"100.000"	"64.9865"	"21385"	"21385"	"21367"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.7"	""	"95.2"	""	"98.3"	""	"143.4"	""	"149.4"	"145.3"	""	"654"	"85"	"35.000"	"28.000"	"1.16023978279379E-07"	"26"	"0"	"1.579E-08"	"1.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vnPDDVGGEALGR.[L]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"764.89325"	"1528.77922"	"1528.78047"	"-0.81"	"-0.00062"	"11/128"	"11"	"128"	"2511435.90966797"	"HCD"	"MS2"	"0"	"107.6"	"100.000"	"64.6987"	"21273"	"21273"	"21255"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"155.1"	""	"120.4"	""	"139.9"	""	"188.7"	""	"222.7"	"195.1"	""	"657"	"72"	"35.000"	"28.000"	"2.0069445518148E-06"	"25"	"0"	"1.909E-07"	"1.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vnPDDVGGEALGR.[L]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9848"	"0.0000"	"1"	"1"	"1"	"764.89526"	"1528.78325"	"1528.78047"	"1.82"	"0.00139"	"12/128"	"12"	"128"	"1446416.59753418"	"HCD"	"MS2"	"0"	"65.4"	"100.000"	"64.9269"	"21376"	"21376"	"21358"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.6"	""	"63.6"	""	"79.4"	""	"122.5"	""	"145.2"	"124.9"	""	"653"	"66"	"35.000"	"28.000"	"8.12611914419199E-06"	"18"	"0"	"1.746E-06"	"1.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPQELNGITR"	"[K].vGDPQELnGITR.[S]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.6400"	"0.0000"	"1"	"1"	"1"	"510.27655"	"1528.81510"	"1528.81685"	"-1.15"	"-0.00058"	"11/118"	"11"	"118"	"514341.258850098"	"HCD"	"MS2"	"33.31072"	"15.6"	"100.000"	"67.4493"	"22404"	"22404"	"22379"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.4"	""	"18.6"	""	"19.3"	""	"28.5"	"1.2"	"29.7"	"32.1"	""	"841"	"25"	"36.000"	"29.000"	"0.123812929701238"	"19"	"0.003449"	"0.03438"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPQELNGITR"	"[K].vGDPQELnGITR.[S]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"764.91193"	"1528.81658"	"1528.81685"	"-0.18"	"-0.00014"	"9/118"	"9"	"118"	"1201655.6965332"	"HCD"	"MS2"	"0"	"54.9"	"100.000"	"58.8781"	"18941"	"18941"	"18920"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"96.6"	""	"54.5"	""	"71.8"	""	"94.7"	"1.4"	"90.8"	"110.0"	""	"847"	"56"	"36.000"	"29.000"	"0.000115572209101921"	"20"	"0"	"9.839E-07"	"1.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPQELNGITR"	"[K].vGDPQELnGITR.[S]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6102"	"0.0000"	"1"	"1"	"1"	"764.91211"	"1528.81694"	"1528.81685"	"0.06"	"0.00004"	"9/118"	"9"	"118"	"1614720.17205811"	"HCD"	"MS2"	"6.897343"	"69.2"	"100.000"	"58.6898"	"18880"	"18880"	"18863"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"127.1"	""	"70.9"	""	"80.6"	""	"119.2"	"0.4"	"119.7"	"137.4"	""	"853"	"59"	"36.000"	"29.000"	"5.8468107326931E-05"	"21"	"0"	"2.29E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPQELNGITR"	"[K].vGDPQELnGITR.[S]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"764.91229"	"1528.81731"	"1528.81685"	"0.30"	"0.00023"	"8/118"	"8"	"118"	"734494.26776123"	"HCD"	"MS2"	"0"	"38.7"	"100.000"	"67.5070"	"22427"	"22427"	"22408"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.1"	""	"49.0"	""	"48.7"	""	"66.0"	""	"72.7"	"77.6"	""	"846"	"24"	"36.000"	"29.000"	"0.166855438777843"	"16"	"0.0023"	"0.02368"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPQELNGITR"	"[K].vGDPQELnGITR.[S]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"764.91235"	"1528.81743"	"1528.81685"	"0.38"	"0.00029"	"14/118"	"14"	"118"	"719473.980651855"	"HCD"	"MS2"	"0"	"38.0"	"100.000"	"67.6377"	"22465"	"22465"	"22446"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.7"	""	"35.4"	""	"48.2"	""	"60.6"	"0.4"	"82.0"	"83.7"	""	"847"	"24"	"36.000"	"29.000"	"0.165521119368082"	"23"	"0.002711"	"0.02612"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPQELNGITR"	"[K].vGDPQELnGITR.[S]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"764.91260"	"1528.81792"	"1528.81685"	"0.70"	"0.00053"	"10/118"	"10"	"118"	"1273510.16973877"	"HCD"	"MS2"	"0"	"55.4"	"100.000"	"67.3310"	"22340"	"22340"	"22322"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.2"	""	"59.0"	""	"69.0"	""	"98.7"	"0.6"	"98.4"	"115.9"	""	"872"	"64"	"36.000"	"29.000"	"1.87277882069491E-05"	"21"	"0"	"1.035E-06"	"1.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPQELNGITR"	"[K].vGDPQELnGITR.[S]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"764.91266"	"1528.81804"	"1528.81685"	"0.78"	"0.00059"	"13/118"	"13"	"118"	"492231.281982422"	"HCD"	"MS2"	"7.620095"	"29.9"	"100.000"	"59.2327"	"19086"	"19086"	"19064"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.0"	""	"37.7"	""	"31.0"	""	"57.6"	""	"54.0"	"57.0"	""	"872"	"19"	"36.000"	"29.000"	"0.577412909344873"	"17"	"0.002937"	"0.02761"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPQELNGITR"	"[K].vGDPQELnGITR.[S]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.5588"	"0.0000"	"1"	"1"	"1"	"764.91266"	"1528.81804"	"1528.81685"	"0.78"	"0.00059"	"7/118"	"7"	"118"	"1378158.10144043"	"HCD"	"MS2"	"0"	"62.3"	"100.000"	"67.2096"	"22306"	"22306"	"22284"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"102.3"	""	"63.3"	""	"79.9"	""	"113.2"	"1.0"	"112.0"	"118.5"	""	"872"	"34"	"36.000"	"29.000"	"0.0156489963505222"	"15"	"0"	"0.001115"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPQELNGITR"	"[K].vGDPQELnGITR.[S]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"764.91284"	"1528.81841"	"1528.81685"	"1.02"	"0.00078"	"13/118"	"13"	"118"	"501313.174072266"	"HCD"	"MS2"	"20.91776"	"30.6"	"100.000"	"59.0051"	"19008"	"19008"	"18989"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.1"	""	"35.7"	""	"36.4"	""	"49.1"	""	"64.0"	"60.5"	""	"860"	"21"	"36.000"	"29.000"	"0.36013759131456"	"19"	"0.003449"	"0.03552"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDLPEELVSR"	"[R].eLDLPEELVSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C6"	"GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1"	"Q4V7C6"	"GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"764.92474"	"1528.84221"	"1528.84200"	"0.14"	"0.00010"	"6/98"	"6"	"98"	"147747.540771484"	"HCD"	"MS2"	"27.68732"	"8.0"	"100.000"	"99.8599"	"34964"	"34964"	"34961"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.6"	"1.8"	"7.2"	""	"11.1"	""	"11.9"	""	"19.1"	"12.9"	""	"825"	"22"	"36.000"	"29.000"	"0.277602870717281"	"28"	"0.0008629"	"0.01035"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDLPEELVSR"	"[R].eLDLPEELVSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C6"	"GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1"	"Q4V7C6"	"GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"764.92590"	"1528.84453"	"1528.84200"	"1.65"	"0.00126"	"5/98"	"5"	"98"	"132331.507873535"	"HCD"	"MS2"	"31.01739"	"7.1"	"100.000"	"99.6011"	"34884"	"34884"	"34879"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.8"	""	"10.2"	""	"8.0"	""	"12.7"	""	"11.2"	"11.8"	""	"820"	"20"	"36.000"	"29.000"	"0.446461338266708"	"20"	"0.00812"	"0.09973"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAASGLVGQENAR"	"[K].qAASGLVGQENAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"765.41498"	"1529.82268"	"1529.82333"	"-0.43"	"-0.00033"	"5/132"	"5"	"132"	"138299.938110352"	"HCD"	"MS2"	"100"	"9.0"	"100.000"	"35.0850"	"9269"	"9269"	"9239"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.8"	""	"12.6"	""	"10.3"	""	"14.2"	""	"17.3"	"18.7"	""	"932"	"13"	"36.000"	"29.000"	"2.34091646717432"	"15"	"0.0002479"	"0.005683"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQEALEAEER"	"[R].lLQEALEAEER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD6"	"PDZ and LIM domain protein 2 OS=Rattus norvegicus OX=10116 GN=Pdlim2 PE=1 SV=1"	"Q6AYD6"	"PDZ and LIM domain protein 2 OS=Rattus norvegicus OX=10116 GN=Pdlim2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"765.42261"	"1529.83794"	"1529.83725"	"0.45"	"0.00034"	"9/108"	"9"	"108"	"107873.409851074"	"HCD"	"MS2"	"21.39269"	"6.6"	"100.000"	"96.6541"	"33911"	"33911"	"33901"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.6"	""	"5.9"	""	"7.3"	""	"14.8"	""	"15.7"	"10.9"	""	"956"	"21"	"36.000"	"29.000"	"0.351906992602484"	"21"	"0.0003538"	"0.006717"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SITHDIEEK"	"[K].sITHDIEEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"3"	"3"	"0.6341"	"0.0000"	"1"	"1"	"1"	"510.62366"	"1529.85642"	"1529.85754"	"-0.74"	"-0.00038"	"11/78"	"11"	"78"	"5747643.82147217"	"HCD"	"MS2"	"35.2722"	"160.6"	"100.000"	"44.6116"	"13131"	"13131"	"13107"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"243.7"	""	"191.7"	""	"206.4"	""	"270.1"	""	"314.0"	"296.8"	""	"982"	"41"	"36.000"	"29.000"	"0.00435593601910639"	""	"0"	"0.0003816"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SITHDIEEK"	"[K].sITHDIEEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"3"	"3"	"0.5750"	"0.0000"	"1"	"1"	"1"	"510.62372"	"1529.85660"	"1529.85754"	"-0.62"	"-0.00031"	"11/78"	"11"	"78"	"5624356.39874268"	"HCD"	"MS2"	"32.25156"	"153.7"	"100.000"	"44.4765"	"13088"	"13088"	"13064"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"249.9"	""	"184.3"	""	"188.2"	""	"264.6"	""	"295.8"	"275.4"	""	"978"	"40"	"36.000"	"29.000"	"0.0044597330044504"	""	"0"	"0.0003819"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AKPLTDQEK"	"[M].akPLTDQEk.[R]"	"N-Term(Prot)(Acetyl); K2(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"765.45038"	"1529.89348"	"1529.89393"	"-0.29"	"-0.00022"	"7/84"	"7"	"84"	"273286.148986816"	"HCD"	"MS2"	"30.85456"	"26.5"	"100.000"	"46.2947"	"13829"	"13829"	"13801"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.2"	""	"24.8"	""	"31.3"	""	"47.4"	"0.3"	"49.2"	"49.9"	""	"776"	"24"	"35.000"	"28.000"	"0.141850779145892"	"14"	"0.009081"	"0.1169"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQYEAMAEK"	"[R].sQYEAmAEk.[N]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"765.89545"	"1530.78362"	"1530.78742"	"-2.48"	"-0.00190"	"7/92"	"7"	"92"	"530004.000854492"	"HCD"	"MS2"	"100"	"42.7"	"100.000"	"36.0660"	"9673"	"9673"	"9656"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.7"	""	"40.8"	""	"61.2"	""	"95.2"	""	"68.4"	"85.1"	""	"783"	"23"	"35.000"	"28.000"	"0.20832038350295"	"16"	"0.001886"	"0.02147"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQYEAMAEK"	"[R].sQYEAmAEk.[N]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"765.89642"	"1530.78557"	"1530.78742"	"-1.21"	"-0.00092"	"11/92"	"11"	"92"	"396093.580749512"	"HCD"	"MS2"	"100"	"30.7"	"100.000"	"36.2327"	"9735"	"9735"	"9709"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.3"	""	"31.1"	""	"46.5"	""	"63.7"	"0.3"	"50.0"	"56.2"	""	"789"	"20"	"35.000"	"28.000"	"0.403689085454757"	"14"	"0.001812"	"0.02022"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQYEAMAEK"	"[R].sQYEAmAEk.[N]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"765.89691"	"1530.78655"	"1530.78742"	"-0.57"	"-0.00043"	"13/92"	"13"	"92"	"562376.131652832"	"HCD"	"MS2"	"0"	"43.4"	"100.000"	"36.3531"	"9789"	"9789"	"9773"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.9"	""	"43.6"	""	"63.6"	""	"95.9"	""	"73.7"	"84.7"	""	"797"	"37"	"36.000"	"29.000"	"0.00769889374331244"	"19"	"0.001886"	"0.02179"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQYEAMAEK"	"[R].sQYEAmAEk.[N]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"765.89716"	"1530.78703"	"1530.78742"	"-0.25"	"-0.00019"	"13/92"	"13"	"92"	"668637.258728027"	"HCD"	"MS2"	"0"	"47.2"	"100.000"	"36.5311"	"9855"	"9855"	"9832"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.4"	""	"45.3"	""	"63.3"	""	"102.0"	""	"85.5"	"99.7"	""	"812"	"39"	"36.000"	"29.000"	"0.00481422111755867"	"15"	"0.001211"	"0.01505"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPSEEEIIK"	"[R].qPSEEEIIk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U318"	"Astrocytic phosphoprotein PEA-15 OS=Rattus norvegicus OX=10116 GN=Pea15 PE=1 SV=1"	"Q5U318"	"Astrocytic phosphoprotein PEA-15 OS=Rattus norvegicus OX=10116 GN=Pea15 PE=1 SV=1"	"0"	"2"	"2"	"0.3200"	"0.0000"	"1"	"1"	"1"	"765.94220"	"1530.87712"	"1530.87794"	"-0.54"	"-0.00041"	"7/86"	"7"	"86"	"347861.640197754"	"HCD"	"MS2"	"0"	"29.5"	"100.000"	"56.4647"	"17972"	"17972"	"17942"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.0"	""	"27.0"	""	"36.5"	""	"63.5"	""	"61.1"	"55.9"	""	"925"	"25"	"36.000"	"29.000"	"0.158530101277733"	""	"0.004942"	"0.05556"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPSEEEIIK"	"[R].qPSEEEIIk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U318"	"Astrocytic phosphoprotein PEA-15 OS=Rattus norvegicus OX=10116 GN=Pea15 PE=1 SV=1"	"Q5U318"	"Astrocytic phosphoprotein PEA-15 OS=Rattus norvegicus OX=10116 GN=Pea15 PE=1 SV=1"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"765.94238"	"1530.87749"	"1530.87794"	"-0.30"	"-0.00023"	"7/86"	"7"	"86"	"392359.474975586"	"HCD"	"MS2"	"0"	"34.2"	"100.000"	"56.7432"	"18071"	"18071"	"18052"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.1"	""	"34.5"	""	"37.6"	""	"65.2"	"0.0"	"64.8"	"73.9"	""	"929"	"25"	"36.000"	"29.000"	"0.133963263320231"	"28"	"0.00263"	"0.02556"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFMIQGGDFTR"	"[K].dFmIQGGDFTR.[G]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"766.37299"	"1531.73870"	"1531.74124"	"-1.66"	"-0.00127"	"5/110"	"5"	"110"	"123095.434204102"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"76.5003"	"26076"	"26076"	"26050"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.7"	""	"7.9"	""	"11.5"	""	"16.2"	""	"19.4"	"16.9"	""	"480"	"13"	"33.000"	"26.000"	"1.26244143933769"	"14"	"0.009081"	"0.1169"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLETAEDIQER"	"[K].vLETAEDIQER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"511.27637"	"1531.81455"	"1531.81652"	"-1.29"	"-0.00066"	"12/98"	"12"	"98"	"633597.915466309"	"HCD"	"MS2"	"15.43047"	"15.5"	"100.000"	"67.5993"	"22465"	"22465"	"22440"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.1"	""	"16.8"	""	"23.9"	""	"31.0"	""	"31.0"	"27.0"	""	"886"	"50"	"36.000"	"29.000"	"0.000441981128273391"	"26"	"0"	"0.001394"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLETAEDIQER"	"[K].vLETAEDIQER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.8545"	"0.0000"	"1"	"1"	"1"	"511.27658"	"1531.81519"	"1531.81652"	"-0.87"	"-0.00044"	"12/98"	"12"	"98"	"645563.094116211"	"HCD"	"MS2"	"9.383239"	"15.1"	"100.000"	"67.7000"	"22491"	"22491"	"22462"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.0"	""	"17.3"	""	"21.2"	""	"29.7"	""	"24.5"	"29.2"	""	"885"	"55"	"36.000"	"29.000"	"0.000129096145369552"	"24"	"0"	"0.0008189"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLETAEDIQER"	"[K].vLETAEDIQER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"766.41174"	"1531.81621"	"1531.81652"	"-0.20"	"-0.00015"	"13/98"	"13"	"98"	"381766.662902832"	"HCD"	"MS2"	"3.711047"	"26.0"	"100.000"	"67.7972"	"22530"	"22530"	"22510"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.5"	""	"32.0"	""	"28.1"	""	"37.3"	"0.3"	"49.5"	"62.1"	""	"880"	"45"	"36.000"	"29.000"	"0.00154686593832451"	"22"	"0"	"0.001358"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGQQQAGGDGK"	"[R].qGQQQAGGDGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"766.41449"	"1531.82170"	"1531.82289"	"-0.77"	"-0.00059"	"8/100"	"8"	"100"	"822685.845703125"	"HCD"	"MS2"	"0"	"70.9"	"100.000"	"21.4013"	"3739"	"3739"	"3716"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"135.1"	""	"53.0"	""	"62.6"	""	"145.6"	"2.8"	"146.9"	"126.7"	""	"905"	"54"	"36.000"	"29.000"	"0.000193918205479841"	"20"	"0"	"2.296E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGQQQAGGDGK"	"[R].qGQQQAGGDGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"766.41479"	"1531.82231"	"1531.82289"	"-0.38"	"-0.00029"	"8/100"	"8"	"100"	"934487.57421875"	"HCD"	"MS2"	"0"	"83.6"	"100.000"	"21.4475"	"3740"	"3740"	"3715"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"152.7"	""	"64.0"	""	"69.0"	""	"182.7"	"1.3"	"171.9"	"150.9"	""	"963"	"56"	"36.000"	"29.000"	"0.000121226144071589"	"23"	"0"	"1.729E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIEPMASEGLR"	"[K].tVIEPMASEGLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.6852"	"0.0000"	"1"	"1"	"1"	"766.42065"	"1531.83403"	"1531.83514"	"-0.73"	"-0.00056"	"9/104"	"9"	"104"	"714488.768432617"	"HCD"	"MS2"	"0"	"34.1"	"100.000"	"71.2132"	"23937"	"23937"	"23921"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.3"	""	"53.7"	""	"58.8"	""	"38.3"	""	"67.9"	"69.2"	""	"1034"	"54"	"37.000"	"30.000"	"0.000218519673575317"	""	"0"	"1.017E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIEPMASEGLR"	"[K].tVIEPMASEGLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"766.42145"	"1531.83562"	"1531.83514"	"0.31"	"0.00024"	"9/104"	"9"	"104"	"715811.617675781"	"HCD"	"MS2"	"0"	"36.2"	"100.000"	"71.3370"	"23974"	"23974"	"23955"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.8"	""	"58.1"	""	"51.1"	""	"46.4"	""	"71.6"	"70.7"	""	"1011"	"52"	"37.000"	"30.000"	"0.000298346646026868"	"29"	"0"	"4.827E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLGPALAHELR"	"[K].ePLGPALAHELR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"511.29742"	"1531.87772"	"1531.87939"	"-1.09"	"-0.00056"	"9/106"	"9"	"106"	"4072741.23883057"	"HCD"	"MS2"	"6.03019"	"47.0"	"100.000"	"66.3651"	"21946"	"21946"	"21927"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.4"	""	"48.6"	""	"50.0"	""	"95.8"	"0.1"	"108.3"	"99.6"	""	"1014"	"72"	"37.000"	"30.000"	"3.25842672679729E-06"	"26"	"0"	"1.369E-07"	"1.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLGPALAHELR"	"[K].ePLGPALAHELR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8471"	"0.0000"	"1"	"1"	"1"	"511.29742"	"1531.87772"	"1531.87939"	"-1.09"	"-0.00056"	"10/106"	"10"	"106"	"7852350.23468018"	"HCD"	"MS2"	"4.768459"	"58.4"	"100.000"	"65.7342"	"21704"	"21704"	"21686"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.5"	""	"57.9"	""	"72.0"	""	"115.3"	""	"132.7"	"124.5"	""	"1014"	"85"	"37.000"	"30.000"	"1.49282176833597E-07"	"30"	"0"	"4.669E-08"	"1.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLGPALAHELR"	"[K].ePLGPALAHELR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8295"	"0.0000"	"1"	"1"	"1"	"511.29755"	"1531.87809"	"1531.87939"	"-0.85"	"-0.00044"	"11/106"	"11"	"106"	"6778992.90301514"	"HCD"	"MS2"	"4.654545"	"52.8"	"100.000"	"65.7472"	"21694"	"21694"	"21676"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.3"	""	"61.5"	""	"58.4"	""	"94.8"	""	"115.7"	"114.6"	""	"1016"	"88"	"37.000"	"30.000"	"7.53119187254144E-08"	""	"0"	"9.004E-08"	"1.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLGPALAHELR"	"[K].ePLGPALAHELR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8701"	"0.0000"	"1"	"1"	"1"	"511.29764"	"1531.87836"	"1531.87939"	"-0.67"	"-0.00034"	"9/106"	"9"	"106"	"1845486.04278564"	"HCD"	"MS2"	"31.14884"	"25.3"	"100.000"	"65.4367"	"21583"	"21583"	"21563"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.3"	""	"32.6"	""	"34.9"	""	"44.4"	""	"48.7"	"51.2"	""	"1016"	"77"	"37.000"	"30.000"	"9.72442009910711E-07"	"28"	"0"	"8.304E-08"	"1.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLGPALAHELR"	"[K].ePLGPALAHELR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8295"	"0.0000"	"1"	"1"	"1"	"511.29764"	"1531.87836"	"1531.87939"	"-0.67"	"-0.00034"	"11/106"	"11"	"106"	"11874396.4244385"	"HCD"	"MS2"	"2.186843"	"75.5"	"100.000"	"66.0514"	"21818"	"21818"	"21801"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"77.5"	""	"79.3"	""	"82.1"	""	"134.1"	"0.9"	"173.1"	"171.0"	""	"1016"	"88"	"37.000"	"30.000"	"7.37672701734574E-08"	""	"0"	"3.227E-08"	"1.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLGPALAHELR"	"[K].ePLGPALAHELR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"511.29767"	"1531.87845"	"1531.87939"	"-0.61"	"-0.00031"	"9/106"	"9"	"106"	"3159309.42553711"	"HCD"	"MS2"	"5.595208"	"39.2"	"100.000"	"66.3404"	"21951"	"21951"	"21933"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.6"	""	"38.6"	""	"51.7"	""	"74.4"	""	"76.2"	"85.4"	""	"1013"	"70"	"37.000"	"30.000"	"5.12364993582638E-06"	"25"	"0"	"4.985E-07"	"1.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLGPALAHELR"	"[K].ePLGPALAHELR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8352"	"0.0000"	"1"	"1"	"1"	"511.29782"	"1531.87891"	"1531.87939"	"-0.32"	"-0.00016"	"10/106"	"10"	"106"	"11120742.4240112"	"HCD"	"MS2"	"1.961123"	"68.8"	"100.000"	"66.0385"	"21829"	"21829"	"21812"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.3"	""	"65.8"	""	"82.0"	""	"112.9"	""	"154.9"	"162.3"	""	"998"	"91"	"36.000"	"29.000"	"3.9819934894672E-08"	""	"0"	"5.323E-08"	"1.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLGPALAHELR"	"[K].ePLGPALAHELR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"511.29788"	"1531.87909"	"1531.87939"	"-0.20"	"-0.00010"	"9/106"	"9"	"106"	"1458890.28161621"	"HCD"	"MS2"	"24.47903"	"22.3"	"100.000"	"65.4568"	"21576"	"21576"	"21549"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.2"	""	"21.5"	""	"33.0"	""	"33.8"	""	"51.3"	"49.5"	""	"1070"	"80"	"37.000"	"30.000"	"4.8568398364533E-07"	"22"	"0"	"1.914E-07"	"1.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDRPELTGAK"	"[K].sDRPELTGAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"511.29944"	"1531.88376"	"1531.88443"	"-0.43"	"-0.00022"	"7/98"	"7"	"98"	"10944954.3363037"	"HCD"	"MS2"	"28.64053"	"540.0"	"100.000"	"34.0252"	"8844"	"8844"	"8823"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"877.5"	""	"658.3"	""	"766.6"	""	"762.6"	""	"1029.5"	"1026.1"	""	"949"	"18"	"36.000"	"29.000"	"0.68428373429855"	"16"	"0.001465"	"0.01852"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQEAGTEVVK"	"[R].iQEAGTEVVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"766.45776"	"1531.90825"	"1531.90958"	"-0.87"	"-0.00066"	"9/96"	"9"	"96"	"1487048.30743408"	"HCD"	"MS2"	"21.68306"	"107.1"	"100.000"	"57.9918"	"18594"	"18594"	"18575"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"143.4"	""	"157.3"	""	"162.2"	""	"163.4"	"0.2"	"179.0"	"208.8"	""	"833"	"66"	"36.000"	"29.000"	"1.06320009255841E-05"	""	"0"	"9.473E-06"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQEAGTEVVK"	"[R].iQEAGTEVVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.8103"	"0.0000"	"1"	"1"	"1"	"511.30765"	"1531.90839"	"1531.90958"	"-0.78"	"-0.00040"	"8/96"	"8"	"96"	"1042201.19067383"	"HCD"	"MS2"	"5.062291"	"39.2"	"100.000"	"58.3098"	"18724"	"18724"	"18703"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.1"	""	"54.2"	""	"69.6"	""	"47.4"	"0.6"	"76.8"	"73.6"	""	"833"	"58"	"36.000"	"29.000"	"6.07596139404683E-05"	"27"	"0"	"8.709E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQEAGTEVVK"	"[R].iQEAGTEVVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.8070"	"0.0000"	"1"	"1"	"1"	"511.30786"	"1531.90903"	"1531.90958"	"-0.36"	"-0.00018"	"8/96"	"8"	"96"	"1863241.97009277"	"HCD"	"MS2"	"23.51942"	"50.5"	"100.000"	"57.9779"	"18589"	"18589"	"18559"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.6"	""	"83.6"	""	"76.8"	""	"77.1"	""	"81.1"	"90.0"	""	"811"	"57"	"36.000"	"29.000"	"7.72664321134096E-05"	"27"	"0"	"3.282E-05"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANGVVLATEK"	"[K].aAnGVVLATEk.[K]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"766.45825"	"1531.90923"	"1531.90958"	"-0.23"	"-0.00018"	"10/98"	"10"	"98"	"340825.53302002"	"HCD"	"MS2"	"62.73625"	"23.1"	"100.000"	"64.9354"	"21365"	"21365"	"21335"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.7"	""	"25.2"	""	"27.8"	""	"39.4"	""	"50.6"	"41.7"	""	"809"	"26"	"36.000"	"29.000"	"0.110133267911751"	"18"	"0.0001301"	"0.0043"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQEAGTEVVK"	"[R].iQEAGTEVVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"511.30795"	"1531.90931"	"1531.90958"	"-0.18"	"-0.00009"	"8/96"	"8"	"96"	"2543728.78216553"	"HCD"	"MS2"	"0"	"65.9"	"100.000"	"58.2267"	"18675"	"18675"	"18655"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.4"	""	"105.9"	""	"108.3"	""	"106.3"	""	"106.3"	"125.3"	""	"809"	"58"	"36.000"	"29.000"	"6.25055420793288E-05"	"26"	"0"	"3.058E-05"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQEAGTEVVK"	"[R].iQEAGTEVVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"766.45862"	"1531.90996"	"1531.90958"	"0.25"	"0.00019"	"9/96"	"9"	"96"	"877586.885314941"	"HCD"	"MS2"	"14.75875"	"73.1"	"100.000"	"58.4567"	"18769"	"18769"	"18751"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"89.3"	""	"107.8"	""	"119.4"	""	"110.5"	""	"126.3"	"140.2"	""	"806"	"65"	"36.000"	"29.000"	"1.37500743383637E-05"	""	"0"	"7.932E-06"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQEAGTEVVK"	"[R].iQEAGTEVVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"766.45868"	"1531.91008"	"1531.90958"	"0.33"	"0.00025"	"8/96"	"8"	"96"	"557390.421142578"	"HCD"	"MS2"	"19.49558"	"50.9"	"100.000"	"58.3051"	"18722"	"18722"	"18703"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.9"	""	"76.3"	""	"84.2"	""	"80.2"	"0.2"	"88.2"	"91.2"	""	"783"	"51"	"35.000"	"28.000"	"0.00031169638568838"	"27"	"0"	"0.0001336"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQEAGTEVVK"	"[R].iQEAGTEVVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"766.45886"	"1531.91045"	"1531.90958"	"0.57"	"0.00043"	"9/96"	"9"	"96"	"1057007.74365234"	"HCD"	"MS2"	"29.25602"	"84.2"	"100.000"	"58.1551"	"18646"	"18646"	"18623"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"109.0"	""	"126.5"	""	"142.8"	""	"125.0"	"0.5"	"135.0"	"157.7"	""	"792"	"68"	"35.000"	"28.000"	"6.42236798554135E-06"	""	"0"	"5.898E-06"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTMGDAPDFDR"	"[R].yTmGDAPDFDR.[S]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P08009"	"Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08009"	"Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"766.84735"	"1532.68743"	"1532.68887"	"-0.95"	"-0.00072"	"4/96"	"4"	"96"	"156805.92791748"	"HCD"	"MS2"	"0"	"12.3"	"100.000"	"52.4534"	"16338"	"16338"	"16312"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.8"	""	"15.5"	""	"15.9"	""	"21.6"	""	"24.9"	"21.7"	""	"244"	"5"	"30.000"	"23.000"	"3.79629393126934"	"13"	"0.008668"	"0.1102"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTMGDAPDFDR"	"[R].yTmGDAPDFDR.[S]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P08009"	"Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08009"	"Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"766.84796"	"1532.68865"	"1532.68887"	"-0.15"	"-0.00011"	"9/96"	"9"	"96"	"158095.897583008"	"HCD"	"MS2"	"15.8546"	"12.9"	"100.000"	"52.7535"	"16449"	"16449"	"16423"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.3"	""	"14.2"	""	"12.3"	""	"22.5"	""	"29.4"	"26.1"	""	"247"	"10"	"30.000"	"23.000"	"1.32028277583998"	"13"	"0.006129"	"0.07006"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFDPQNPDDNE"	"[K].iFDPQNPDDNE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"766.85663"	"1532.70598"	"1532.70663"	"-0.43"	"-0.00033"	"6/106"	"6"	"106"	"242875.967163086"	"HCD"	"MS2"	"34.63851"	"10.3"	"100.000"	"82.4863"	"28480"	"28480"	"28464"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.0"	""	"9.4"	""	"7.4"	""	"29.2"	""	"18.6"	"26.1"	""	"324"	"13"	"32.000"	"25.000"	"0.83275071556353"	"13"	"0.0004639"	"0.007819"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFDPQNPDDNE"	"[K].iFDPQNPDDNE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"766.85663"	"1532.70598"	"1532.70663"	"-0.43"	"-0.00033"	"5/106"	"5"	"106"	"273096.981445313"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"82.1678"	"28356"	"28356"	"28341"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.0"	""	"13.2"	""	"14.2"	""	"19.9"	""	"22.8"	"24.7"	""	"324"	"24"	"32.000"	"25.000"	"0.0636084795347352"	"14"	"0.003581"	"0.03747"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFDPQNPDDNE"	"[K].iFDPQNPDDNE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"766.85699"	"1532.70671"	"1532.70663"	"0.05"	"0.00004"	"6/106"	"6"	"106"	"204175.724914551"	"HCD"	"MS2"	"31.00067"	"8.1"	"100.000"	"82.4616"	"28473"	"28473"	"28459"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.4"	""	"7.4"	""	"5.6"	""	"23.7"	""	"18.7"	"15.4"	""	"329"	"11"	"32.000"	"25.000"	"1.46610779323001"	"13"	"0.0008629"	"0.009824"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFDPQNPDDNE"	"[K].iFDPQNPDDNE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"766.85736"	"1532.70745"	"1532.70663"	"0.53"	"0.00041"	"6/106"	"6"	"106"	"199630.260437012"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"82.1670"	"28353"	"28353"	"28336"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.1"	""	"9.8"	""	"8.7"	""	"16.5"	""	"14.4"	"16.0"	""	"336"	"15"	"32.000"	"25.000"	"0.558868049533927"	"13"	"0.0008629"	"0.009641"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGHVEVDESR"	"[K].yLGHVEVDESR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2LC84"	"Protein numb homolog OS=Rattus norvegicus OX=10116 GN=Numb PE=1 SV=2"	"Q2LC84"	"Protein numb homolog OS=Rattus norvegicus OX=10116 GN=Numb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"511.60123"	"1532.78913"	"1532.79064"	"-0.99"	"-0.00050"	"11/88"	"11"	"88"	"2220764.51416016"	"HCD"	"MS2"	"55.64323"	"60.9"	"100.000"	"44.5721"	"13115"	"13115"	"13091"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"82.9"	""	"71.2"	""	"84.1"	""	"90.9"	""	"128.4"	"121.3"	""	"834"	"13"	"36.000"	"29.000"	"2.04708584355635"	"13"	"0.001374"	"0.01795"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILSPVDIMDR"	"[R].eILSPVDImDR.[S]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P97544"	"Phospholipid phosphatase 3 OS=Rattus norvegicus OX=10116 GN=Plpp3 PE=1 SV=1"	"P97544"	"Phospholipid phosphatase 3 OS=Rattus norvegicus OX=10116 GN=Plpp3 PE=1 SV=1"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"766.91235"	"1532.81743"	"1532.81916"	"-1.13"	"-0.00087"	"5/98"	"5"	"98"	"133953.737365723"	"HCD"	"MS2"	"40.33673"	"6.1"	"100.000"	"82.6524"	"28547"	"28547"	"28522"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.2"	""	"3.8"	""	"3.2"	""	"19.6"	""	"16.1"	"12.2"	""	"922"	"19"	"36.000"	"29.000"	"0.5710852263905"	"26"	"0.001374"	"0.01804"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILSPVDIMDR"	"[R].eILSPVDImDR.[S]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P97544"	"Phospholipid phosphatase 3 OS=Rattus norvegicus OX=10116 GN=Plpp3 PE=1 SV=1"	"P97544"	"Phospholipid phosphatase 3 OS=Rattus norvegicus OX=10116 GN=Plpp3 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"766.91333"	"1532.81938"	"1532.81916"	"0.15"	"0.00011"	"5/98"	"5"	"98"	"113885.917480469"	"HCD"	"MS2"	"35.46145"	"6.1"	"100.000"	"82.6207"	"28537"	"28537"	"28514"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.8"	""	"7.0"	""	"3.5"	""	"16.7"	""	"16.2"	"12.1"	""	"998"	"20"	"36.000"	"29.000"	"0.494425140501491"	"20"	"0.001211"	"0.01565"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVQVETISSGDGR"	"[M].gVQVETISSGDGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62658"	"Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Rattus norvegicus OX=10116 GN=Fkbp1a PE=1 SV=3"	"Q62658"	"Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Rattus norvegicus OX=10116 GN=Fkbp1a PE=1 SV=3"	"0"	"2"	"2"	"0.9306"	"0.0000"	"1"	"1"	"1"	"767.40662"	"1533.80596"	"1533.80702"	"-0.69"	"-0.00053"	"10/128"	"10"	"128"	"914094.227661133"	"HCD"	"MS2"	"0"	"53.2"	"100.000"	"46.4368"	"13887"	"13887"	"13862"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.5"	""	"51.9"	""	"69.2"	""	"107.4"	""	"93.8"	"127.5"	""	"905"	"72"	"36.000"	"29.000"	"2.95541575072982E-06"	"22"	"0"	"2.597E-07"	"1.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVQVETISSGDGR"	"[M].gVQVETISSGDGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62658"	"Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Rattus norvegicus OX=10116 GN=Fkbp1a PE=1 SV=3"	"Q62658"	"Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Rattus norvegicus OX=10116 GN=Fkbp1a PE=1 SV=3"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"767.40674"	"1533.80620"	"1533.80702"	"-0.53"	"-0.00041"	"8/128"	"8"	"128"	"452169.235534668"	"HCD"	"MS2"	"0"	"29.8"	"100.000"	"46.7348"	"14006"	"14006"	"13983"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.8"	""	"30.0"	""	"38.5"	""	"54.1"	"0.0"	"64.0"	"59.5"	""	"894"	"29"	"36.000"	"29.000"	"0.0593345322605194"	"19"	"0"	"0.0006347"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVQVETISSGDGR"	"[M].gVQVETISSGDGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62658"	"Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Rattus norvegicus OX=10116 GN=Fkbp1a PE=1 SV=3"	"Q62658"	"Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Rattus norvegicus OX=10116 GN=Fkbp1a PE=1 SV=3"	"0"	"2"	"2"	"0.9718"	"0.0000"	"1"	"1"	"1"	"767.40692"	"1533.80657"	"1533.80702"	"-0.29"	"-0.00022"	"10/128"	"10"	"128"	"538184.718078613"	"HCD"	"MS2"	"0"	"32.3"	"100.000"	"46.5838"	"13935"	"13935"	"13914"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.9"	""	"35.8"	""	"47.3"	""	"54.8"	""	"58.6"	"69.7"	""	"900"	"71"	"36.000"	"29.000"	"3.23752040101664E-06"	"19"	"0"	"4.283E-07"	"1.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVQVETISSGDGR"	"[M].gVQVETISSGDGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62658"	"Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Rattus norvegicus OX=10116 GN=Fkbp1a PE=1 SV=3"	"Q62658"	"Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Rattus norvegicus OX=10116 GN=Fkbp1a PE=1 SV=3"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"767.40741"	"1533.80754"	"1533.80702"	"0.34"	"0.00026"	"12/128"	"12"	"128"	"752840.28894043"	"HCD"	"MS2"	"12.38776"	"43.3"	"100.000"	"46.9000"	"14062"	"14062"	"14041"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.6"	""	"42.8"	""	"58.8"	""	"84.8"	""	"85.0"	"94.3"	""	"899"	"58"	"36.000"	"29.000"	"6.61804469843507E-05"	"18"	"0"	"1.68E-06"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQPMTEIVSR"	"[R].lDQPmTEIVSR.[V]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"767.41022"	"1533.81316"	"1533.81441"	"-0.82"	"-0.00063"	"9/112"	"9"	"112"	"1455955.39489746"	"HCD"	"MS2"	"3.413895"	"54.8"	"100.000"	"55.2187"	"17464"	"17464"	"17447"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.9"	""	"42.9"	""	"63.3"	""	"159.5"	""	"99.7"	"91.5"	""	"968"	"43"	"36.000"	"29.000"	"0.00247654008401509"	"22"	"0"	"0.001595"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQPMTEIVSR"	"[R].lDQPmTEIVSR.[V]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"767.41052"	"1533.81377"	"1533.81441"	"-0.42"	"-0.00032"	"13/112"	"13"	"112"	"568792.451416016"	"HCD"	"MS2"	"0"	"27.8"	"100.000"	"55.5412"	"17595"	"17595"	"17574"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.3"	""	"23.1"	""	"27.3"	""	"79.2"	""	"53.9"	"49.7"	""	"951"	"47"	"36.000"	"29.000"	"0.000920768643856611"	"25"	"0.0003538"	"0.007084"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQPMTEIVSR"	"[R].lDQPmTEIVSR.[V]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"767.41089"	"1533.81450"	"1533.81441"	"0.06"	"0.00005"	"10/112"	"10"	"112"	"1298961.54095459"	"HCD"	"MS2"	"0"	"56.2"	"100.000"	"55.4140"	"17529"	"17529"	"17511"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"69.4"	""	"51.6"	""	"64.0"	""	"153.3"	"2.4"	"103.5"	"88.0"	""	"952"	"44"	"36.000"	"29.000"	"0.00187761675787833"	"20"	"0"	"0.001309"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQPMTEIVSR"	"[R].lDQPmTEIVSR.[V]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"767.41095"	"1533.81462"	"1533.81441"	"0.14"	"0.00011"	"10/112"	"10"	"112"	"813227.453186035"	"HCD"	"MS2"	"0"	"35.2"	"100.000"	"55.7181"	"17653"	"17653"	"17634"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.6"	""	"31.3"	"2.2"	"34.1"	""	"94.8"	""	"65.1"	"67.1"	""	"952"	"54"	"36.000"	"29.000"	"0.000180970152648587"	"26"	"0"	"0.001021"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNLAGAEELFAR"	"[R].nNLAGAEELFAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"767.41412"	"1533.82097"	"1533.82227"	"-0.85"	"-0.00065"	"9/112"	"9"	"112"	"157366.212463379"	"HCD"	"MS2"	"47.39072"	"6.4"	"100.000"	"87.5119"	"30454"	"30454"	"30432"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.3"	""	"4.9"	""	"5.9"	""	"12.9"	""	"17.0"	"12.5"	""	"982"	"50"	"36.000"	"29.000"	"0.000452982570732989"	"18"	"0"	"4.605E-05"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNLAGAEELFAR"	"[R].nNLAGAEELFAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"767.41443"	"1533.82158"	"1533.82227"	"-0.45"	"-0.00035"	"8/112"	"8"	"112"	"203512.969604492"	"HCD"	"MS2"	"51.46022"	"7.7"	"100.000"	"87.4654"	"30441"	"30441"	"30426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.2"	""	"7.7"	""	"11.0"	""	"9.0"	""	"16.7"	"18.1"	""	"982"	"34"	"36.000"	"29.000"	"0.0204212109752565"	"19"	"0"	"0.0003575"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVAQYGLDPATR"	"[R].nVAQYGLDPATR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZBP4"	"[F-actin]-monooxygenase MICAL1 OS=Rattus norvegicus OX=10116 GN=Mical1 PE=1 SV=1"	"D3ZBP4"	"[F-actin]-monooxygenase MICAL1 OS=Rattus norvegicus OX=10116 GN=Mical1 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"767.41510"	"1533.82292"	"1533.82227"	"0.42"	"0.00033"	"5/116"	"5"	"116"	"174180.52331543"	"HCD"	"MS2"	"40.46271"	"13.3"	"100.000"	"59.3615"	"19139"	"19139"	"19110"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.7"	""	"16.0"	""	"21.6"	""	"19.5"	""	"26.9"	"24.3"	""	"1015"	"26"	"37.000"	"30.000"	"0.128954364806627"	"18"	"0.000936"	"0.01321"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVAQYGLDPATR"	"[R].nVAQYGLDPATR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZBP4"	"[F-actin]-monooxygenase MICAL1 OS=Rattus norvegicus OX=10116 GN=Mical1 PE=1 SV=1"	"D3ZBP4"	"[F-actin]-monooxygenase MICAL1 OS=Rattus norvegicus OX=10116 GN=Mical1 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"767.41553"	"1533.82378"	"1533.82227"	"0.98"	"0.00075"	"5/116"	"5"	"116"	"183529.109436035"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"59.1501"	"19068"	"19068"	"19037"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.6"	""	"14.4"	""	"20.0"	""	"19.3"	""	"21.2"	"30.4"	""	"1022"	"15"	"37.000"	"30.000"	"1.49768644832291"	"15"	"0.005501"	"0.06276"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSMGDAPDYDR"	"[K].ySmGDAPDYDR.[S]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"767.83685"	"1534.66643"	"1534.66814"	"-1.11"	"-0.00085"	"14/96"	"14"	"96"	"303491.936950684"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"38.4461"	"10628"	"10628"	"10606"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.2"	""	"17.8"	""	"17.9"	""	"29.1"	""	"34.7"	"30.7"	""	"155"	"37"	"28.000"	"21.000"	"0.00143318317970801"	"15"	"0"	"0.002109"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSMGDAPDYDR"	"[K].ySmGDAPDYDR.[S]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"767.83771"	"1534.66814"	"1534.66814"	"0.00"	"0.00000"	"6/96"	"6"	"96"	"231167.221313477"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"38.7612"	"10756"	"10756"	"10725"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.9"	""	"15.7"	""	"17.8"	""	"25.3"	""	"29.6"	"34.9"	""	"159"	"19"	"29.000"	"22.000"	"0.101710813680523"	"14"	"0.002973"	"0.02942"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSMGDAPDYDR"	"[K].ySmGDAPDYDR.[S]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"767.83875"	"1534.67021"	"1534.66814"	"1.35"	"0.00104"	"7/96"	"7"	"96"	"300941.811584473"	"HCD"	"MS2"	"0"	"16.9"	"100.000"	"38.1923"	"10533"	"10533"	"10506"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.8"	""	"14.4"	""	"20.7"	""	"28.0"	""	"30.5"	"35.6"	""	"165"	"31"	"29.000"	"22.000"	"0.00585401658569796"	"14"	"0.001374"	"0.01623"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WMPEITDEER"	"[K].wMPEITDEER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"767.87329"	"1534.73931"	"1534.74091"	"-1.05"	"-0.00080"	"5/82"	"5"	"82"	"209640.972717285"	"HCD"	"MS2"	"4.805315"	"11.8"	"100.000"	"86.3049"	"29981"	"29981"	"29968"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.7"	""	"15.8"	""	"11.3"	""	"14.0"	""	"20.4"	"23.1"	""	"479"	"19"	"33.000"	"26.000"	"0.329083053015497"	"18"	"0.006254"	"0.07102"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WMPEITDEER"	"[K].wMPEITDEER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"767.87341"	"1534.73955"	"1534.74091"	"-0.89"	"-0.00068"	"7/82"	"7"	"82"	"429532.510437012"	"HCD"	"MS2"	"9.48931"	"21.8"	"100.000"	"86.0293"	"29873"	"29873"	"29860"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.2"	""	"23.1"	""	"27.1"	""	"26.7"	"1.0"	"38.9"	"33.7"	""	"475"	"22"	"33.000"	"26.000"	"0.15476174358945"	"24"	"0.005119"	"0.05808"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WMPEITDEER"	"[K].wMPEITDEER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"767.87372"	"1534.74016"	"1534.74091"	"-0.49"	"-0.00037"	"12/82"	"12"	"82"	"474716.724243164"	"HCD"	"MS2"	"8.469734"	"24.7"	"100.000"	"86.0710"	"29890"	"29890"	"29876"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.3"	""	"36.9"	""	"27.8"	""	"28.3"	"0.6"	"42.1"	"37.6"	""	"481"	"30"	"33.000"	"26.000"	"0.0249525584004232"	"23"	"0.00379"	"0.03904"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WMPEITDEER"	"[K].wMPEITDEER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"767.87396"	"1534.74065"	"1534.74091"	"-0.17"	"-0.00013"	"5/82"	"5"	"82"	"126188.209716797"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"86.3809"	"30015"	"30015"	"29993"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.8"	""	"8.2"	""	"13.8"	""	"8.8"	""	"13.4"	"12.9"	""	"481"	"22"	"33.000"	"26.000"	"0.14693155698979"	"20"	"0.003449"	"0.03346"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAHDHTDEVIR"	"[K].iAHDHTDEVIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"4"	"4"	"0.8684"	"0.0000"	"1"	"1"	"1"	"384.45850"	"1534.81215"	"1534.81752"	"-3.50"	"-0.00134"	"8/88"	"8"	"88"	"5610039.8581543"	"HCD"	"MS2"	"8.375091"	"125.8"	"100.000"	"27.2779"	"6112"	"6112"	"6096"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"161.9"	""	"154.1"	""	"189.1"	""	"225.3"	""	"251.5"	"210.4"	""	"970"	"38"	"36.000"	"29.000"	"0.0083318556777143"	"20"	"0"	"0.0001009"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAHDHTDEVIR"	"[K].iAHDHTDEVIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"4"	"4"	"0.8421"	"0.0000"	"1"	"1"	"1"	"384.45898"	"1534.81411"	"1534.81752"	"-2.22"	"-0.00085"	"8/88"	"8"	"88"	"4874092.97631836"	"HCD"	"MS2"	"11.01628"	"117.1"	"100.000"	"27.3612"	"6131"	"6131"	"6118"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"129.1"	""	"149.4"	""	"156.3"	""	"207.6"	"1.9"	"263.7"	"203.9"	""	"959"	"38"	"36.000"	"29.000"	"0.00709232472126656"	"21"	"0"	"0.0001966"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDIQSVMTEVR"	"[K].eDIQSVMTEVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"2"	"2"	"0.4091"	"0.0000"	"1"	"1"	"1"	"768.39954"	"1535.79180"	"1535.79367"	"-1.22"	"-0.00094"	"7/110"	"7"	"110"	"106582.283569336"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"80.9107"	"27850"	"27850"	"27827"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.6"	""	"8.5"	""	"9.0"	""	"6.3"	""	"11.1"	"13.1"	""	"854"	"22"	"36.000"	"29.000"	"0.263286065794853"	"27"	"0.001374"	"0.01683"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDIQSVMTEVR"	"[K].eDIQSVMTEVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"768.40027"	"1535.79326"	"1535.79367"	"-0.27"	"-0.00021"	"5/110"	"5"	"110"	"120926.06262207"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"80.9782"	"27878"	"27878"	"27852"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.6"	""	"6.0"	""	"9.6"	""	"7.1"	""	"15.4"	"11.3"	""	"858"	"16"	"36.000"	"29.000"	"0.982782223037375"	"20"	"0.000936"	"0.01186"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTEAEKNER"	"[R].tTEAEkNER.[V]"	"N-Term(TMT6plex); K6(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"512.61908"	"1535.84269"	"1535.84296"	"-0.18"	"-0.00009"	"7/84"	"7"	"84"	"9114204.11248779"	"HCD"	"MS2"	"47.29347"	"500.5"	"100.000"	"20.9915"	"3554"	"3554"	"3543"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"869.0"	""	"496.4"	""	"546.0"	""	"943.4"	"7.9"	"966.7"	"913.4"	""	"983"	"7"	"36.000"	"29.000"	"10.7528483817121"	"13"	"0.001812"	"0.02076"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALYDASFETK"	"[R].YALYDASFETk.[E]"	"K11(TMT6plex)"	"1"	"1"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"768.89337"	"1536.77947"	"1536.77834"	"0.73"	"0.00056"	"7/90"	"7"	"90"	"112877.817077637"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"79.3658"	"27229"	"27229"	"27208"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.5"	""	"8.1"	""	"8.6"	""	"13.0"	""	"10.7"	"13.5"	""	"801"	"54"	"36.000"	"29.000"	"0.000156531778764857"	"20"	"0.0003538"	"0.006234"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALYDASFETK"	"[R].YALYDASFETk.[E]"	"K11(TMT6plex)"	"1"	"1"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"768.89551"	"1536.78374"	"1536.77834"	"3.51"	"0.00270"	"8/90"	"8"	"90"	"121468.155517578"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"79.3566"	"27221"	"27221"	"27194"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.1"	""	"6.3"	""	"8.2"	""	"10.2"	""	"12.4"	"13.8"	""	"869"	"66"	"36.000"	"29.000"	"9.95381995127596E-06"	"17"	"0"	"0.002327"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEVFDGDPDK"	"[K].gEVFDGDPDk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35094"	"Mitochondrial import inner membrane translocase subunit TIM44 OS=Rattus norvegicus OX=10116 GN=Timm44 PE=1 SV=1"	"O35094"	"Mitochondrial import inner membrane translocase subunit TIM44 OS=Rattus norvegicus OX=10116 GN=Timm44 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"512.93597"	"1536.79337"	"1536.79461"	"-0.81"	"-0.00041"	"9/86"	"9"	"86"	"718196.480651855"	"HCD"	"MS2"	"58.41768"	"29.1"	"100.000"	"57.7887"	"18497"	"18497"	"18466"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.2"	""	"30.9"	""	"34.4"	""	"57.6"	""	"61.4"	"60.4"	""	"900"	"12"	"36.000"	"29.000"	"2.86557984408562"	"17"	"0.007602"	"0.08999"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQQSMAVGSLGAR"	"[R].sQQSmAVGSLGAR.[S]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q641Z2"	"Tyrosine-protein phosphatase non-receptor type 9 OS=Rattus norvegicus OX=10116 GN=Ptpn9 PE=2 SV=1"	"Q641Z2"	"Tyrosine-protein phosphatase non-receptor type 9 OS=Rattus norvegicus OX=10116 GN=Ptpn9 PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"768.90350"	"1536.79973"	"1536.80016"	"-0.28"	"-0.00021"	"4/134"	"4"	"134"	"112701.965087891"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"33.0623"	"8451"	"8451"	"8425"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.9"	""	"10.6"	""	"13.2"	""	"15.5"	""	"9.3"	"11.2"	""	"921"	"8"	"36.000"	"29.000"	"7.92920478781056"	"14"	"0.004022"	"0.04279"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQAGNPGGPGPGGR"	"[R].sVQAGNPGGPGPGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"768.90643"	"1536.80559"	"1536.80802"	"-1.58"	"-0.00121"	"5/136"	"5"	"136"	"145642.313720703"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"28.4720"	"6584"	"6584"	"6553"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.7"	""	"5.5"	""	"7.8"	""	"9.4"	""	"12.1"	"9.3"	""	"951"	"28"	"36.000"	"29.000"	"0.0755353978958244"	"22"	"0"	"0.0007137"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQAGNPGGPGPGGR"	"[R].sVQAGNPGGPGPGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"768.90741"	"1536.80754"	"1536.80802"	"-0.31"	"-0.00024"	"12/136"	"12"	"136"	"235247.732971191"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"28.3523"	"6549"	"6549"	"6518"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.8"	""	"11.1"	""	"15.0"	""	"15.2"	""	"13.4"	"16.6"	""	"970"	"39"	"36.000"	"29.000"	"0.00550480245601072"	"22"	"0"	"0.000139"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDMNEIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"512.94897"	"1536.83237"	"1536.83437"	"-1.30"	"-0.00066"	"7/82"	"7"	"82"	"3917940.33093262"	"HCD"	"MS2"	"14.76513"	"112.6"	"100.000"	"70.7187"	"23735"	"23735"	"23717"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"187.4"	""	"163.7"	""	"166.1"	""	"135.4"	""	"207.3"	"206.9"	""	"979"	"32"	"36.000"	"29.000"	"0.0301823253411195"	"24"	"0"	"0.002028"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDMNEIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"512.94916"	"1536.83292"	"1536.83437"	"-0.94"	"-0.00048"	"7/82"	"7"	"82"	"1940480.76574707"	"HCD"	"MS2"	"9.785819"	"57.6"	"100.000"	"71.0246"	"23860"	"23860"	"23841"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.6"	""	"69.8"	""	"81.2"	""	"84.0"	""	"114.9"	"112.3"	""	"988"	"33"	"36.000"	"29.000"	"0.0249302680996383"	"23"	"0.001374"	"0.0163"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDMNEIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"512.94928"	"1536.83329"	"1536.83437"	"-0.70"	"-0.00036"	"7/82"	"7"	"82"	"1369396.27844238"	"HCD"	"MS2"	"0"	"46.9"	"100.000"	"71.1460"	"23896"	"23896"	"23877"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"69.7"	""	"60.6"	""	"67.6"	""	"68.2"	""	"86.0"	"96.1"	""	"989"	"28"	"36.000"	"29.000"	"0.0847551888562915"	"22"	"0.0006732"	"0.008948"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDMNEIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"512.94940"	"1536.83365"	"1536.83437"	"-0.46"	"-0.00024"	"5/82"	"5"	"82"	"3447085.03546143"	"HCD"	"MS2"	"22.12513"	"97.8"	"100.000"	"70.8359"	"23769"	"23769"	"23749"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"176.1"	""	"136.1"	""	"135.7"	""	"123.6"	""	"181.8"	"178.5"	""	"994"	"30"	"36.000"	"29.000"	"0.0556360628083174"	"22"	"0.0001301"	"0.003906"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDMNEIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"768.92053"	"1536.83379"	"1536.83437"	"-0.38"	"-0.00029"	"7/82"	"7"	"82"	"876311.07623291"	"HCD"	"MS2"	"5.679072"	"83.0"	"100.000"	"70.7185"	"23721"	"23721"	"23701"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"144.5"	""	"116.6"	""	"115.8"	""	"113.3"	""	"148.2"	"147.7"	""	"992"	"54"	"36.000"	"29.000"	"0.000189881072685144"	"23"	"0"	"0.0002699"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDMNEIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"768.92059"	"1536.83391"	"1536.83437"	"-0.30"	"-0.00023"	"7/82"	"7"	"82"	"5090482.91711426"	"HCD"	"MS2"	"0"	"419.1"	"100.000"	"70.8659"	"23795"	"23795"	"23779"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"722.6"	""	"539.0"	""	"616.0"	""	"493.6"	""	"772.4"	"828.8"	""	"993"	"54"	"36.000"	"29.000"	"0.000187033436195511"	"24"	"0"	"0.0003881"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDMNEIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"768.92072"	"1536.83415"	"1536.83437"	"-0.14"	"-0.00011"	"7/82"	"7"	"82"	"4600834.33599854"	"HCD"	"MS2"	"0"	"382.1"	"100.000"	"71.0221"	"23846"	"23846"	"23829"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"656.1"	""	"492.7"	""	"552.2"	""	"452.4"	"5.0"	"725.7"	"735.7"	""	"996"	"54"	"36.000"	"29.000"	"0.000192410754572927"	"24"	"0"	"0.0004942"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDMNEIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"768.92139"	"1536.83550"	"1536.83437"	"0.74"	"0.00057"	"8/82"	"8"	"82"	"752454.848632813"	"HCD"	"MS2"	"0"	"68.9"	"100.000"	"70.5827"	"23680"	"23680"	"23656"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"125.5"	""	"98.6"	""	"97.9"	""	"87.4"	"1.7"	"125.5"	"115.4"	""	"992"	"52"	"36.000"	"29.000"	"0.00031223506669717"	"24"	"0"	"0.0003143"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDMAALTAAGK"	"[K].nDmAALTAAGk.[E]"	"N-Term(TMT6plex); M3(Oxidation); K11(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"768.92560"	"1536.84392"	"1536.84560"	"-1.09"	"-0.00084"	"15/110"	"15"	"110"	"335738.659118652"	"HCD"	"MS2"	"0"	"30.6"	"100.000"	"48.1280"	"14575"	"14575"	"14546"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.1"	""	"26.2"	""	"38.5"	""	"69.4"	"0.6"	"60.4"	"57.1"	""	"973"	"43"	"36.000"	"29.000"	"0.00219827916938399"	"20"	"0"	"0.002767"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEEVVIAGMSGK"	"[-].mEEVVIAGMSGk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"769.39240"	"1537.77751"	"1537.78033"	"-1.83"	"-0.00141"	"11/104"	"11"	"104"	"139925.924499512"	"HCD"	"MS2"	"12.7076"	"5.2"	"100.000"	"95.9183"	"33628"	"33628"	"33620"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.0"	""	"8.9"	""	"8.8"	""	"5.7"	""	"8.4"	"13.6"	""	"789"	"39"	"35.000"	"28.000"	"0.00507045587347756"	"15"	"0"	"0.0006016"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEEVVIAGMSGK"	"[-].mEEVVIAGmSGk.[L]"	"N-Term(Prot)(Acetyl); M9(Oxidation); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"769.39294"	"1537.77861"	"1537.78033"	"-1.12"	"-0.00086"	"10/104"	"10"	"104"	"131671.132873535"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"98.5522"	"34526"	"34526"	"34517"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.6"	""	"4.5"	""	"4.3"	""	"5.7"	""	"3.9"	"7.0"	""	"805"	"32"	"36.000"	"29.000"	"0.0271497531148414"	"14"	"0"	"0.001746"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEEVVIAGMSGK"	"[-].mEEVVIAGMSGk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"769.39337"	"1537.77947"	"1537.78033"	"-0.56"	"-0.00043"	"12/104"	"12"	"104"	"139800.342773438"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"95.8967"	"33640"	"33640"	"33629"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.5"	""	"9.2"	""	"6.4"	""	"6.1"	""	"9.3"	"12.8"	""	"816"	"38"	"36.000"	"29.000"	"0.00602088265576565"	"15"	"0"	"0.001303"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEEVVIAGMSGK"	"[-].mEEVVIAGMSGk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"769.39392"	"1537.78057"	"1537.78033"	"0.15"	"0.00012"	"12/104"	"12"	"104"	"296909.550292969"	"HCD"	"MS2"	"3.611648"	"10.7"	"100.000"	"96.1835"	"33719"	"33719"	"33711"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.2"	""	"13.5"	""	"17.2"	""	"17.1"	""	"20.4"	"21.0"	""	"819"	"70"	"36.000"	"29.000"	"4.26828987336558E-06"	"24"	"0"	"1.32E-05"	"0.877"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEEVVIAGMSGK"	"[-].mEEVVIAGMSGk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.9815"	"0.0000"	"1"	"1"	"1"	"769.39392"	"1537.78057"	"1537.78033"	"0.15"	"0.00012"	"13/104"	"13"	"104"	"320755.658447266"	"HCD"	"MS2"	"0"	"12.1"	"100.000"	"96.1594"	"33731"	"33731"	"33726"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.9"	""	"19.1"	""	"17.0"	""	"16.7"	""	"22.5"	"27.5"	""	"819"	"54"	"36.000"	"29.000"	"0.00015568755779327"	"17"	"0"	"2.52E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEEVVIAGMSGK"	"[-].mEEVVIAGmSGk.[L]"	"N-Term(Prot)(Acetyl); M9(Oxidation); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"769.39423"	"1537.78118"	"1537.78033"	"0.55"	"0.00042"	"10/104"	"10"	"104"	"97826.6784057617"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"98.5731"	"34562"	"34562"	"34556"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.9"	""	"4.6"	""	"5.0"	""	"4.1"	""	"6.8"	"4.6"	""	"820"	"46"	"36.000"	"29.000"	"0.000983521496797991"	"23"	"0"	"0.002252"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEEVVIAGMSGK"	"[-].mEEVVIAGmSGk.[L]"	"N-Term(Prot)(Acetyl); M9(Oxidation); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"769.39514"	"1537.78301"	"1537.78033"	"1.74"	"0.00134"	"8/104"	"8"	"104"	"105118.721130371"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"97.8099"	"34304"	"34304"	"34301"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.8"	""	"3.6"	""	"8.1"	""	"7.2"	""	"5.3"	"8.4"	""	"829"	"26"	"36.000"	"29.000"	"0.103639315242317"	"21"	"0"	"0.003753"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPGPDPEEEIR"	"[K].vAPGPDPEEEIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"769.40649"	"1537.80571"	"1537.80595"	"-0.16"	"-0.00012"	"9/96"	"9"	"96"	"305265.065368652"	"HCD"	"MS2"	"0"	"15.9"	"100.000"	"56.6190"	"18035"	"18035"	"18006"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.8"	""	"18.4"	""	"24.1"	""	"19.5"	""	"35.2"	"35.0"	""	"862"	"16"	"36.000"	"29.000"	"1.154721547997"	"15"	"0.005254"	"0.05919"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPGPDPEEEIR"	"[K].vAPGPDPEEEIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"769.40656"	"1537.80583"	"1537.80595"	"-0.08"	"-0.00006"	"9/96"	"9"	"96"	"196548.642150879"	"HCD"	"MS2"	"0"	"13.5"	"100.000"	"56.9068"	"18138"	"18138"	"18115"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.7"	""	"17.8"	""	"17.4"	""	"22.7"	""	"23.5"	"30.9"	""	"861"	"6"	"36.000"	"29.000"	"11.6137682566754"	"13"	"0.009417"	"0.1236"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEPSEVFINR"	"[R].yGEPSEVFINR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLH4"	"Paraspeckle component 1 OS=Rattus norvegicus OX=10116 GN=Pspc1 PE=1 SV=1"	"Q4KLH4"	"Paraspeckle component 1 OS=Rattus norvegicus OX=10116 GN=Pspc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"770.40314"	"1539.79900"	"1539.80047"	"-0.96"	"-0.00074"	"7/88"	"7"	"88"	"266991.584228516"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"71.6167"	"24102"	"24102"	"24074"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.9"	""	"17.6"	""	"22.0"	""	"30.9"	""	"35.1"	"36.8"	""	"816"	"44"	"36.000"	"29.000"	"0.00161681437976219"	"23"	"0.0004639"	"0.007534"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEPSEVFINR"	"[R].yGEPSEVFINR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLH4"	"Paraspeckle component 1 OS=Rattus norvegicus OX=10116 GN=Pspc1 PE=1 SV=1"	"Q4KLH4"	"Paraspeckle component 1 OS=Rattus norvegicus OX=10116 GN=Pspc1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"770.40356"	"1539.79985"	"1539.80047"	"-0.40"	"-0.00031"	"7/88"	"7"	"88"	"236051.282714844"	"HCD"	"MS2"	"0"	"16.4"	"100.000"	"71.7152"	"24128"	"24128"	"24104"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.3"	""	"16.5"	""	"20.1"	""	"29.9"	""	"32.5"	"37.5"	""	"823"	"36"	"36.000"	"29.000"	"0.00984849433760817"	"24"	"0.001374"	"0.01618"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYESIEEAK"	"[K].iYESIEEAk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"770.43622"	"1539.86516"	"1539.86705"	"-1.22"	"-0.00094"	"5/72"	"5"	"72"	"116292.604614258"	"HCD"	"MS2"	"19.33738"	"10.1"	"100.000"	"79.7788"	"27395"	"27395"	"27368"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.1"	""	"14.5"	""	"12.6"	""	"16.6"	""	"18.4"	"20.6"	""	"830"	"14"	"36.000"	"29.000"	"1.5033084434293"	"13"	"0.00736"	"0.08784"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGESAWNLENR"	"[R].hGESAWNLENR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"3"	"3"	"0.8644"	"0.0000"	"1"	"1"	"1"	"514.59259"	"1541.76322"	"1541.76582"	"-1.69"	"-0.00087"	"12/100"	"12"	"100"	"4866008.02429199"	"HCD"	"MS2"	"71.94656"	"72.9"	"100.000"	"36.1970"	"9726"	"9726"	"9704"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"106.9"	""	"89.2"	""	"114.6"	""	"113.0"	"1.8"	"126.4"	"138.0"	""	"679"	"59"	"35.000"	"28.000"	"4.19604153654411E-05"	"24"	"0"	"2.345E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGESAWNLENR"	"[R].hGESAWNLENR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"771.38660"	"1541.76592"	"1541.76582"	"0.06"	"0.00005"	"12/100"	"12"	"100"	"216905.415649414"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"36.3324"	"9781"	"9781"	"9759"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.6"	""	"16.0"	""	"18.8"	""	"28.6"	""	"25.6"	"22.3"	""	"700"	"26"	"35.000"	"28.000"	"0.0839591521656822"	"14"	"0.0001301"	"0.004601"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGESAWNLENR"	"[R].hGESAWNLENR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"514.59357"	"1541.76615"	"1541.76582"	"0.21"	"0.00011"	"13/100"	"13"	"100"	"4314586.92193604"	"HCD"	"MS2"	"43.64052"	"64.5"	"100.000"	"36.3566"	"9784"	"9784"	"9766"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.9"	""	"72.9"	""	"93.7"	""	"99.0"	"0.8"	"116.1"	"124.8"	""	"699"	"55"	"35.000"	"28.000"	"0.000114142447344231"	"26"	"0"	"2.497E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEAFDPFDK"	"[R].dEAFDPFDk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"771.39734"	"1541.78740"	"1541.78880"	"-0.90"	"-0.00070"	"9/78"	"9"	"78"	"229082.609985352"	"HCD"	"MS2"	"0"	"21.5"	"100.000"	"93.9113"	"32904"	"32904"	"32893"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.3"	""	"18.3"	""	"29.4"	""	"37.0"	"1.3"	"46.3"	"41.9"	""	"776"	"24"	"35.000"	"28.000"	"0.138303039769383"	"24"	"0.001546"	"0.01951"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEAFDPFDK"	"[R].dEAFDPFDk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"771.39783"	"1541.78838"	"1541.78880"	"-0.27"	"-0.00021"	"7/78"	"7"	"78"	"164808.421936035"	"HCD"	"MS2"	"15.3611"	"14.5"	"100.000"	"93.6355"	"32804"	"32804"	"32792"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.8"	""	"14.1"	""	"16.0"	""	"25.7"	""	"29.1"	"32.8"	""	"770"	"18"	"35.000"	"28.000"	"0.655331025732055"	"25"	"0.00912"	"0.1173"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEAFDPFDK"	"[R].dEAFDPFDk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"771.39807"	"1541.78887"	"1541.78880"	"0.05"	"0.00004"	"6/78"	"6"	"78"	"220178.795837402"	"HCD"	"MS2"	"7.540659"	"20.0"	"100.000"	"93.9083"	"32920"	"32920"	"32912"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.6"	""	"14.6"	""	"23.0"	""	"37.1"	""	"41.0"	"46.4"	""	"796"	"34"	"35.000"	"29.000"	"0.0165151708968476"	""	"0.0003538"	"0.007155"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEAFDPFDK"	"[R].dEAFDPFDk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"771.39813"	"1541.78899"	"1541.78880"	"0.12"	"0.00010"	"5/78"	"5"	"78"	"160331.168701172"	"HCD"	"MS2"	"17.25341"	"13.8"	"100.000"	"93.6393"	"32822"	"32822"	"32812"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.0"	""	"13.4"	""	"14.6"	""	"27.0"	""	"29.5"	"25.0"	""	"796"	"21"	"35.000"	"29.000"	"0.350657451457189"	"22"	"0.002871"	"0.02716"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAQNPDEGPK"	"[K].qAQNPDEGPk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P756"	"Adaptin ear-binding coat-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Necap2 PE=1 SV=2"	"Q6P756"	"Adaptin ear-binding coat-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Necap2 PE=1 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"771.41876"	"1541.83025"	"1541.83239"	"-1.39"	"-0.00107"	"6/92"	"6"	"92"	"104175.380981445"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"27.8153"	"6331"	"6331"	"6305"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.9"	""	"9.1"	""	"10.7"	""	"13.4"	""	"12.2"	"16.7"	""	"842"	"32"	"36.000"	"29.000"	"0.0285287074704094"	"24"	"0.001374"	"0.01773"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQWNQLQQLDTR"	"[M].aQWNQLQQLDTR.[Y]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"771.88635"	"1542.76543"	"1542.76593"	"-0.33"	"-0.00025"	"5/110"	"5"	"110"	"81771.9229736328"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"96.9178"	"33986"	"33986"	"33976"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.8"	""	"2.7"	""	"3.7"	""	"6.4"	""	"4.3"	"7.3"	"NoQuanLabels"	"641"	"26"	"35.000"	"28.000"	"0.0846892006721684"	"14"	"0.0008629"	"0.01014"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQWNQLQQLDTR"	"[M].aQWNQLQQLDTR.[Y]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"771.88666"	"1542.76604"	"1542.76593"	"0.07"	"0.00005"	"3/110"	"3"	"110"	"83333.7282714844"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"96.8806"	"33994"	"33994"	"33988"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.1"	""	"6.1"	""	"4.1"	""	"3.9"	""	"4.7"	"6.3"	"NoQuanLabels"	"639"	"2"	"35.000"	"28.000"	"18.7702848133264"	"13"	"0.007627"	"0.09176"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQWNQLQQLDTR"	"[M].aQWNQLQQLDTR.[Y]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"771.88678"	"1542.76628"	"1542.76593"	"0.23"	"0.00018"	"6/110"	"6"	"110"	"68210.9144897461"	"HCD"	"MS2"	"0"	"2.0"	"100.000"	"97.1341"	"34076"	"34076"	"34074"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.8"	""	""	""	"3.5"	""	"4.0"	""	"3.8"	"5.4"	"NoQuanLabels"	"650"	"39"	"35.000"	"28.000"	"0.00437404615068183"	"15"	"0.0001301"	"0.004865"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSSTVAPTLPGEVR"	"[K].TKSSTVAPTLPGEVR.[T]"	""	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"771.93628"	"1542.86528"	"1542.84860"	"10.81"	"0.00834"	"10/162"	"10"	"162"	"3412413.66723633"	"HCD"	"MS2"	"48.41301"	"181.2"	"100.000"	"59.2234"	"19082"	"19082"	"19064"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"250.7"	""	"216.2"	""	"181.4"	""	"328.2"	""	"379.6"	"369.1"	"NoQuanLabels"	"840"	"49"	"36.000"	"29.000"	"0.000593265768741556"	"21"	"0"	"0.000833"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSSTVAPTLPGEVR"	"[K].TKSSTVAPTLPGEVR.[T]"	""	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"3"	"3"	"0.0682"	"0.0000"	"1"	"1"	"1"	"514.96039"	"1542.86661"	"1542.84860"	"11.68"	"0.00600"	"15/162"	"15"	"162"	"2306488.11132813"	"HCD"	"MS2"	"23.13686"	"43.3"	"100.000"	"59.6494"	"19256"	"19256"	"19238"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.3"	""	"56.2"	""	"54.9"	""	"72.4"	""	"90.1"	"79.3"	"NoQuanLabels"	"835"	"44"	"36.000"	"29.000"	"0.00148476075502551"	"21"	"0.003717"	"0.03846"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSSTVAPTLPGEVR"	"[K].TKSSTVAPTLPGEVR.[T]"	""	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"2"	"2"	"0.1948"	"0.0000"	"1"	"1"	"1"	"771.93762"	"1542.86797"	"1542.84860"	"12.56"	"0.00969"	"10/162"	"10"	"162"	"4599560.67913818"	"HCD"	"MS2"	"0"	"166.0"	"100.000"	"59.5274"	"19207"	"19207"	"19190"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"235.8"	""	"235.9"	""	"182.4"	""	"280.7"	""	"342.0"	"299.2"	"NoQuanLabels"	"819"	"77"	"36.000"	"29.000"	"7.76701074735965E-07"	""	"0"	"0.0001956"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSSTVAPTLPGEVR"	"[K].TKSSTVAPTLPGEVR.[T]"	""	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"2"	"2"	"0.1829"	"0.0000"	"1"	"1"	"1"	"771.93762"	"1542.86797"	"1542.84860"	"12.56"	"0.00969"	"10/162"	"10"	"162"	"4695133.45947266"	"HCD"	"MS2"	"0"	"175.9"	"100.000"	"59.2953"	"19127"	"19127"	"19110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"273.2"	""	"256.1"	""	"191.9"	""	"317.1"	"1.6"	"336.6"	"290.0"	"NoQuanLabels"	"819"	"82"	"36.000"	"29.000"	"2.44485949856081E-07"	""	"0"	"0.0001311"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSSTVAPTLPGEVR"	"[K].TKSSTVAPTLPGEVR.[T]"	""	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"3"	"3"	"0.0536"	"0.0000"	"1"	"1"	"1"	"514.96100"	"1542.86844"	"1542.84860"	"12.86"	"0.00662"	"15/162"	"15"	"162"	"10442332.1465454"	"HCD"	"MS2"	"27.09175"	"97.9"	"100.000"	"59.1158"	"19054"	"19054"	"19037"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"144.6"	""	"126.4"	""	"119.3"	""	"160.5"	""	"181.3"	"196.5"	"NoQuanLabels"	"801"	"56"	"36.000"	"29.000"	"0.000103419520634915"	"22"	"0"	"0.0004648"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSSTVAPTLPGEVR"	"[K].TKSSTVAPTLPGEVR.[T]"	""	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"514.96106"	"1542.86863"	"1542.84860"	"12.98"	"0.00668"	"15/162"	"15"	"162"	"10124992.2504883"	"HCD"	"MS2"	"31.4796"	"107.4"	"100.000"	"59.3318"	"19127"	"19127"	"19110"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"165.6"	""	"128.2"	""	"127.2"	""	"176.7"	""	"215.2"	"212.9"	"NoQuanLabels"	"801"	"54"	"36.000"	"29.000"	"0.00017442250541107"	"22"	"0"	"0.0007856"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSSTVAPTLPGEVR"	"[K].TKSSTVAPTLPGEVR.[T]"	""	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"2"	"2"	"0.0690"	"0.0000"	"1"	"1"	"1"	"771.93823"	"1542.86919"	"1542.84860"	"13.35"	"0.01030"	"18/162"	"18"	"162"	"4240664.8314209"	"HCD"	"MS2"	"39.27399"	"212.2"	"100.000"	"58.9984"	"19006"	"19006"	"18989"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"315.9"	""	"238.3"	""	"205.6"	""	"374.6"	"0.4"	"429.5"	"449.9"	"NoQuanLabels"	"801"	"58"	"36.000"	"29.000"	"7.04048407390456E-05"	"23"	"0"	"1.276E-05"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLNQDYETLR"	"[K].yLNQDYETLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"772.39905"	"1543.79082"	"1543.79539"	"-2.96"	"-0.00228"	"8/92"	"8"	"92"	"2194946.22351074"	"HCD"	"MS2"	"2.627323"	"112.0"	"100.000"	"67.9686"	"22614"	"22614"	"22594"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"164.6"	""	"140.0"	""	"151.3"	""	"165.7"	"0.6"	"209.7"	"229.7"	""	"733"	"49"	"35.000"	"28.000"	"0.000452974734357413"	"19"	"0"	"0.0001563"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLNQDYETLR"	"[K].yLNQDYETLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"772.40063"	"1543.79399"	"1543.79539"	"-0.90"	"-0.00070"	"8/92"	"8"	"92"	"2506369.5065918"	"HCD"	"MS2"	"0"	"127.6"	"100.000"	"68.1244"	"22664"	"22664"	"22647"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"196.1"	""	"173.7"	""	"182.1"	""	"191.8"	"4.6"	"227.7"	"231.8"	""	"738"	"50"	"35.000"	"28.000"	"0.000400891055114697"	"20"	"0"	"6.04E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLNQDYETLR"	"[K].yLNQDYETLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"772.40118"	"1543.79509"	"1543.79539"	"-0.19"	"-0.00015"	"8/92"	"8"	"92"	"3175531.38061523"	"HCD"	"MS2"	"0"	"166.0"	"100.000"	"68.4333"	"22790"	"22790"	"22773"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"254.5"	""	"204.5"	""	"231.8"	""	"245.5"	""	"304.8"	"332.6"	""	"734"	"49"	"35.000"	"28.000"	"0.000480469765740782"	"21"	"0"	"0.0001665"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLNQDYETLR"	"[K].yLNQDYETLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"772.40167"	"1543.79607"	"1543.79539"	"0.44"	"0.00034"	"8/92"	"8"	"92"	"3749408.03808594"	"HCD"	"MS2"	"0"	"189.4"	"100.000"	"68.2660"	"22736"	"22736"	"22719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"280.1"	""	"232.1"	""	"262.2"	""	"277.7"	""	"369.5"	"375.7"	""	"744"	"49"	"35.000"	"28.000"	"0.000433054882940702"	"20"	"0"	"0.0001496"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPSGGEGIEPER"	"[R].mGPSGGEGIEPER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"772.88129"	"1544.75530"	"1544.75762"	"-1.51"	"-0.00116"	"8/112"	"8"	"112"	"368359.877929688"	"HCD"	"MS2"	"0"	"22.1"	"100.000"	"44.5553"	"13120"	"13120"	"13096"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.8"	""	"22.9"	""	"22.7"	""	"35.5"	""	"51.8"	"47.9"	""	"520"	"48"	"34.000"	"27.000"	"0.000389918057230616"	"16"	"0"	"0.0008821"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPSGGEGIEPER"	"[R].mGPSGGEGIEPER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"772.88135"	"1544.75542"	"1544.75762"	"-1.43"	"-0.00110"	"8/112"	"8"	"112"	"353073.172790527"	"HCD"	"MS2"	"0"	"23.0"	"100.000"	"44.6996"	"13167"	"13167"	"13139"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.6"	""	"24.5"	""	"24.5"	""	"29.8"	"1.4"	"60.0"	"50.1"	""	"520"	"48"	"34.000"	"27.000"	"0.000436489044711865"	"16"	"0"	"0.0005279"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLNQDYETLR"	"[K].yLnQDYETLR.[N]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"772.89301"	"1544.77873"	"1544.77940"	"-0.43"	"-0.00034"	"10/92"	"10"	"92"	"191811.958740234"	"HCD"	"MS2"	"0"	"13.9"	"100.000"	"72.8815"	"24603"	"24603"	"24575"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.1"	""	"16.4"	""	"16.3"	""	"18.6"	""	"28.4"	"31.4"	""	"647"	"20"	"35.000"	"28.000"	"0.34583925342853"	"14"	"0.003449"	"0.0342"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLNQDYETLR"	"[K].yLnQDYETLR.[N]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"772.89319"	"1544.77910"	"1544.77940"	"-0.20"	"-0.00015"	"8/92"	"8"	"92"	"137477.055847168"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"73.7647"	"24962"	"24962"	"24937"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.7"	""	"9.5"	""	"14.6"	""	"17.8"	""	"23.1"	"21.7"	""	"645"	"19"	"35.000"	"28.000"	"0.416418215740365"	"21"	"0.004867"	"0.05144"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLNQDYETLR"	"[K].yLnQDYETLR.[N]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"772.89429"	"1544.78130"	"1544.77940"	"1.23"	"0.00095"	"11/92"	"11"	"92"	"212164.479553223"	"HCD"	"MS2"	"14.31173"	"15.8"	"100.000"	"72.7371"	"24558"	"24558"	"24529"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.1"	""	"21.2"	""	"19.1"	""	"25.5"	""	"29.1"	"34.3"	""	"664"	"26"	"35.000"	"28.000"	"0.0794580831126589"	"14"	"0.002547"	"0.02544"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVIEPMASEGLR"	"[R].nVIEPMASEGLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"772.91797"	"1544.82866"	"1544.83039"	"-1.12"	"-0.00087"	"10/120"	"10"	"120"	"735330.476013184"	"HCD"	"MS2"	"0"	"36.5"	"100.000"	"70.2573"	"23547"	"23547"	"23528"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.6"	""	"41.4"	""	"51.1"	""	"48.4"	"0.1"	"79.6"	"77.9"	""	"1018"	"60"	"37.000"	"30.000"	"4.90588973024601E-05"	""	"0"	"2.339E-06"	"1.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVIEPMASEGLR"	"[R].nVIEPMASEGLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.9038"	"0.0000"	"1"	"1"	"1"	"772.91876"	"1544.83025"	"1544.83039"	"-0.09"	"-0.00007"	"9/120"	"9"	"120"	"700143.087280273"	"HCD"	"MS2"	"0"	"34.9"	"100.000"	"70.3654"	"23577"	"23577"	"23557"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.1"	""	"50.2"	""	"48.2"	""	"46.3"	""	"71.1"	"77.6"	""	"1004"	"52"	"37.000"	"30.000"	"0.000333199021341758"	"21"	"0"	"2.508E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVIEPMASEGLR"	"[R].nVIEPMASEGLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"772.91931"	"1544.83135"	"1544.83039"	"0.62"	"0.00048"	"4/120"	"4"	"120"	"119422.098754883"	"HCD"	"MS2"	"9.915593"	"10.9"	"100.000"	"70.5896"	"23683"	"23683"	"23656"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.9"	""	"11.7"	""	"12.4"	""	"18.6"	""	"24.6"	"19.5"	""	"1004"	"13"	"37.000"	"30.000"	"2.62242886877558"	"19"	"0.001886"	"0.02123"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTEIGDLEGLR"	"[K].vNTEIGDLEGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.8590"	"0.0000"	"1"	"1"	"1"	"772.92731"	"1544.84734"	"1544.84815"	"-0.53"	"-0.00041"	"10/120"	"10"	"120"	"463438.176208496"	"HCD"	"MS2"	"0"	"23.6"	"100.000"	"88.8624"	"30977"	"30977"	"30967"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.8"	""	"32.6"	""	"22.0"	""	"40.6"	""	"38.4"	"39.9"	""	"1021"	"78"	"37.000"	"30.000"	"8.27934054701734E-07"	"29"	"0"	"5.488E-08"	"1.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTEIGDLEGLR"	"[K].vNTEIGDLEGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"772.92767"	"1544.84807"	"1544.84815"	"-0.05"	"-0.00004"	"9/120"	"9"	"120"	"267013.988037109"	"HCD"	"MS2"	"0"	"13.9"	"100.000"	"88.8716"	"30978"	"30978"	"30964"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.4"	""	"24.5"	""	"14.3"	""	"23.6"	""	"19.8"	"24.5"	""	"986"	"66"	"36.000"	"29.000"	"1.32082998413578E-05"	"28"	"0"	"5.249E-06"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTEIGDLEGLR"	"[K].vNTEIGDLEGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"772.92865"	"1544.85002"	"1544.84815"	"1.21"	"0.00094"	"6/120"	"6"	"120"	"146552.079772949"	"HCD"	"MS2"	"22.27242"	"8.2"	"100.000"	"88.5908"	"30875"	"30875"	"30862"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.2"	""	"16.0"	""	"9.0"	""	"16.7"	""	"14.5"	"9.3"	""	"983"	"28"	"36.000"	"29.000"	"0.0766520055139449"	"21"	"0.001134"	"0.01391"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVESTASTPGPSR"	"[K].qVESTASTPGPSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"773.40717"	"1545.80705"	"1545.80702"	"0.03"	"0.00002"	"5/138"	"5"	"138"	"100008.013916016"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"27.7927"	"6307"	"6307"	"6278"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.3"	""	"3.2"	""	"7.1"	""	"12.7"	""	"19.5"	"10.1"	""	"837"	"18"	"36.000"	"29.000"	"0.737386975423267"	"22"	"0.001211"	"0.01529"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVESTASTPGPSR"	"[K].qVESTASTPGPSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"773.40717"	"1545.80705"	"1545.80702"	"0.03"	"0.00002"	"5/138"	"5"	"138"	"120002.655395508"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"27.7234"	"6294"	"6294"	"6263"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.6"	""	"4.6"	""	"9.0"	""	"14.4"	""	"14.5"	"9.9"	""	"837"	"24"	"36.000"	"29.000"	"0.16021215507809"	"21"	"0.0004639"	"0.007602"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDDITDGNPK"	"[R].nDDITDGNPk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"773.90906"	"1546.81084"	"1546.81132"	"-0.31"	"-0.00024"	"7/98"	"7"	"98"	"349430.855407715"	"HCD"	"MS2"	"0"	"32.1"	"100.000"	"40.5864"	"11500"	"11500"	"11482"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.2"	""	"38.0"	""	"44.2"	""	"48.8"	"2.0"	"62.6"	"56.2"	""	"912"	"30"	"36.000"	"29.000"	"0.0463409403949037"	"25"	"0.002379"	"0.02478"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLPYVAEDELR"	"[R].lLPYVAEDELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJM7"	"Platelet glycoprotein Ib beta chain OS=Rattus norvegicus OX=10116 GN=Gp1bb PE=1 SV=1"	"Q9JJM7"	"Platelet glycoprotein Ib beta chain OS=Rattus norvegicus OX=10116 GN=Gp1bb PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"773.93695"	"1546.86662"	"1546.86782"	"-0.78"	"-0.00060"	"6/84"	"6"	"84"	"54535.3707885742"	"HCD"	"MS2"	"13.74086"	"2.8"	"100.000"	"103.9317"	"36144"	"36144"	"36138"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.1"	""	"4.2"	""	"2.8"	""	"4.5"	""	"3.8"	"6.8"	""	"1107"	"13"	"37.000"	"30.000"	"2.93168716194033"	"18"	"0.006505"	"0.07351"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLPYVAEDELR"	"[R].lLPYVAEDELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJM7"	"Platelet glycoprotein Ib beta chain OS=Rattus norvegicus OX=10116 GN=Gp1bb PE=1 SV=1"	"Q9JJM7"	"Platelet glycoprotein Ib beta chain OS=Rattus norvegicus OX=10116 GN=Gp1bb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"773.93768"	"1546.86809"	"1546.86782"	"0.17"	"0.00013"	"5/84"	"5"	"84"	"138528.204345703"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"103.6122"	"36129"	"36129"	"36124"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.0"	""	"3.8"	""	"1.6"	""	"5.6"	""	"7.1"	"7.7"	""	"1099"	"16"	"37.000"	"30.000"	"1.36448164135992"	"14"	"0.006958"	"0.08088"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLPYVAEDELR"	"[R].lLPYVAEDELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJM7"	"Platelet glycoprotein Ib beta chain OS=Rattus norvegicus OX=10116 GN=Gp1bb PE=1 SV=1"	"Q9JJM7"	"Platelet glycoprotein Ib beta chain OS=Rattus norvegicus OX=10116 GN=Gp1bb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"773.93787"	"1546.86846"	"1546.86782"	"0.41"	"0.00032"	"8/84"	"8"	"84"	"86482.8715820313"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"103.6622"	"36070"	"36070"	"36068"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.2"	""	"3.6"	""	"3.4"	""	"7.2"	"2.0"	"6.2"	"8.5"	""	"1120"	"19"	"37.000"	"30.000"	"0.758906070916579"	"14"	"0.002871"	"0.02684"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAEQELEK"	"[R].eLAEQELEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4909"	"0.0000"	"1"	"1"	"1"	"773.93951"	"1546.87175"	"1546.87286"	"-0.72"	"-0.00055"	"8/86"	"8"	"86"	"268498.228088379"	"HCD"	"MS2"	"7.91984"	"25.0"	"100.000"	"64.2130"	"21090"	"21090"	"21065"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.0"	""	"24.5"	""	"32.7"	""	"39.2"	""	"48.2"	"53.7"	""	"1109"	"55"	"37.000"	"30.000"	"0.00016707118404112"	""	"0"	"0.0001162"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAEQELEK"	"[R].eLAEQELEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.3396"	"0.0000"	"1"	"1"	"1"	"773.93994"	"1546.87261"	"1546.87286"	"-0.16"	"-0.00013"	"16/86"	"16"	"86"	"669269.58996582"	"HCD"	"MS2"	"27.50218"	"59.9"	"100.000"	"63.9682"	"20976"	"20976"	"20951"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"100.9"	""	"59.3"	""	"70.0"	""	"87.1"	"1.6"	"122.9"	"126.3"	""	"1106"	"53"	"37.000"	"30.000"	"0.00027779545200588"	""	"0"	"0.0001008"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAEQELEK"	"[R].eLAEQELEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4565"	"0.0000"	"1"	"1"	"1"	"773.94025"	"1546.87322"	"1546.87286"	"0.23"	"0.00018"	"13/86"	"13"	"86"	"305808.645385742"	"HCD"	"MS2"	"6.219291"	"30.8"	"100.000"	"64.2951"	"21109"	"21109"	"21083"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.2"	""	"28.4"	""	"43.0"	""	"47.5"	"0.4"	"59.8"	"67.2"	""	"1100"	"46"	"37.000"	"30.000"	"0.0014235171033342"	""	"0"	"0.0009698"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAEQELEK"	"[R].eLAEQELEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4717"	"0.0000"	"1"	"1"	"1"	"773.94031"	"1546.87334"	"1546.87286"	"0.31"	"0.00024"	"16/86"	"16"	"86"	"733666.559753418"	"HCD"	"MS2"	"20.62552"	"65.2"	"100.000"	"63.8881"	"20958"	"20958"	"20933"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.2"	""	"67.7"	""	"73.4"	""	"96.8"	""	"130.7"	"156.4"	""	"1117"	"53"	"37.000"	"30.000"	"0.000281205090008045"	""	"0"	"0.0001415"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPTIEDFYR"	"[K].yDPTIEDFYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P61227"	"Ras-related protein Rap-2b OS=Rattus norvegicus OX=10116 GN=Rap2b PE=2 SV=1"	"P61227"	"Ras-related protein Rap-2b OS=Rattus norvegicus OX=10116 GN=Rap2b PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.38220"	"1547.75713"	"1547.75794"	"-0.52"	"-0.00041"	"8/82"	"8"	"82"	"166807.351623535"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"91.5545"	"32023"	"32023"	"32011"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.6"	""	"9.1"	""	"9.4"	""	"13.2"	""	"18.6"	"20.3"	""	"550"	"14"	"34.000"	"27.000"	"1.16233868923041"	"13"	"0.004867"	"0.05112"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPTIEDFYR"	"[K].yDPTIEDFYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P61227"	"Ras-related protein Rap-2b OS=Rattus norvegicus OX=10116 GN=Rap2b PE=2 SV=1"	"P61227"	"Ras-related protein Rap-2b OS=Rattus norvegicus OX=10116 GN=Rap2b PE=2 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"774.38226"	"1547.75725"	"1547.75794"	"-0.45"	"-0.00035"	"8/82"	"8"	"82"	"471996.364501953"	"HCD"	"MS2"	"0"	"27.0"	"100.000"	"91.8383"	"32129"	"32129"	"32119"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.4"	""	"25.3"	""	"25.8"	""	"47.5"	""	"64.1"	"64.1"	""	"550"	"38"	"34.000"	"27.000"	"0.00435845627926806"	"18"	"0"	"0.002396"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPTIEDFYR"	"[K].yDPTIEDFYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P61227"	"Ras-related protein Rap-2b OS=Rattus norvegicus OX=10116 GN=Rap2b PE=2 SV=1"	"P61227"	"Ras-related protein Rap-2b OS=Rattus norvegicus OX=10116 GN=Rap2b PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.38269"	"1547.75810"	"1547.75794"	"0.11"	"0.00008"	"8/82"	"8"	"82"	"560978.994262695"	"HCD"	"MS2"	"0"	"29.4"	"100.000"	"91.7435"	"32088"	"32088"	"32084"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.2"	""	"25.2"	""	"31.9"	""	"54.8"	"2.3"	"66.9"	"57.9"	""	"560"	"42"	"34.000"	"27.000"	"0.00192379163203985"	"15"	"0"	"0.000161"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIQVDNTDAEGR"	"[K].tIQVDNTDAEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.7255"	"0.0000"	"1"	"1"	"1"	"774.39404"	"1547.78081"	"1547.78628"	"-3.53"	"-0.00274"	"11/124"	"11"	"124"	"653253.045532227"	"HCD"	"MS2"	"42.4685"	"49.4"	"100.000"	"40.4203"	"11442"	"11442"	"11414"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"84.0"	""	"61.3"	""	"58.5"	""	"79.2"	""	"92.6"	"95.5"	""	"784"	"51"	"35.000"	"28.000"	"0.000342204776408139"	""	"0"	"3.042E-05"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIQVDNTDAEGR"	"[K].tIQVDNTDAEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"774.39447"	"1547.78166"	"1547.78628"	"-2.98"	"-0.00231"	"7/124"	"7"	"124"	"354837.827453613"	"HCD"	"MS2"	"0"	"28.9"	"100.000"	"40.5611"	"11490"	"11490"	"11469"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.4"	""	"31.4"	""	"41.1"	""	"46.2"	""	"52.7"	"51.1"	""	"791"	"31"	"35.000"	"28.000"	"0.0324449035782443"	"22"	"0.0006732"	"0.008286"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIQVDNTDAEGR"	"[K].tIQVDNTDAEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"774.39532"	"1547.78337"	"1547.78628"	"-1.88"	"-0.00145"	"9/124"	"9"	"124"	"638518.255737305"	"HCD"	"MS2"	"8.41466"	"45.9"	"100.000"	"40.4480"	"11453"	"11453"	"11430"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.6"	""	"50.8"	""	"55.7"	""	"77.4"	""	"90.1"	"81.9"	""	"785"	"35"	"35.000"	"28.000"	"0.0124979752727751"	"20"	"0"	"0.0009811"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIEPMASEGLR"	"[K].tVIEPmASEGLR.[T]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"774.41791"	"1547.82854"	"1547.83006"	"-0.98"	"-0.00076"	"10/104"	"10"	"104"	"847374.213562012"	"HCD"	"MS2"	"0"	"37.9"	"100.000"	"55.7646"	"17686"	"17686"	"17665"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.8"	""	"37.2"	""	"52.8"	""	"96.7"	"1.0"	"65.9"	"64.6"	""	"1077"	"62"	"37.000"	"30.000"	"3.64909951848349E-05"	"30"	"0"	"0.0009776"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIEPMASEGLR"	"[K].tVIEPmASEGLR.[T]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"774.41840"	"1547.82952"	"1547.83006"	"-0.35"	"-0.00027"	"10/104"	"10"	"104"	"926752.493286133"	"HCD"	"MS2"	"14.20423"	"41.5"	"100.000"	"56.0199"	"17776"	"17776"	"17757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.1"	""	"46.2"	""	"72.4"	""	"81.7"	"1.7"	"77.7"	"70.2"	""	"1063"	"30"	"37.000"	"30.000"	"0.051227512605614"	"26"	"0"	"0.002897"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLENPNALTER"	"[K].yLENPNALTER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"774.91412"	"1548.82097"	"1548.82194"	"-0.62"	"-0.00048"	"9/108"	"9"	"108"	"400064.655334473"	"HCD"	"MS2"	"0"	"26.5"	"100.000"	"64.4011"	"21152"	"21152"	"21131"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.5"	""	"30.0"	"2.0"	"40.1"	""	"35.3"	""	"48.8"	"53.3"	""	"959"	"39"	"36.000"	"29.000"	"0.00556914610336444"	"16"	"0"	"0.003105"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLENPNALTER"	"[K].yLENPNALTER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"774.91473"	"1548.82219"	"1548.82194"	"0.16"	"0.00013"	"9/108"	"9"	"108"	"494625.672546387"	"HCD"	"MS2"	"4.88649"	"31.8"	"100.000"	"64.3398"	"21141"	"21141"	"21126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.6"	""	"41.1"	""	"48.3"	""	"42.8"	""	"59.7"	"61.6"	""	"966"	"35"	"36.000"	"29.000"	"0.0161788307113231"	"17"	"0"	"0.002861"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVIDMGNSLIER"	"[R].gVIDmGNSLIER.[G]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"774.91553"	"1548.82378"	"1548.82531"	"-0.99"	"-0.00077"	"13/112"	"13"	"112"	"300487.955078125"	"HCD"	"MS2"	"0"	"17.0"	"100.000"	"66.1575"	"21862"	"21862"	"21832"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.3"	""	"21.9"	""	"9.9"	""	"38.6"	""	"41.5"	"35.2"	""	"976"	"29"	"36.000"	"29.000"	"0.0689318321775903"	"29"	"0.0008629"	"0.009552"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVIDMGNSLIER"	"[R].gVIDmGNSLIER.[G]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"774.91632"	"1548.82536"	"1548.82531"	"0.04"	"0.00003"	"7/112"	"7"	"112"	"310935.165771484"	"HCD"	"MS2"	"0"	"16.9"	"100.000"	"66.0660"	"21840"	"21840"	"21812"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.4"	""	"16.7"	""	"16.7"	""	"40.5"	""	"38.0"	"36.9"	""	"962"	"35"	"36.000"	"29.000"	"0.0152807642798254"	"28"	"0.004069"	"0.04492"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPTEADELMK"	"[R].gPTEADELMk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.0968"	"0.0000"	"1"	"1"	"1"	"774.91681"	"1548.82634"	"1548.83437"	"-5.18"	"-0.00401"	"9/80"	"9"	"80"	"1241659.90393066"	"HCD"	"MS2"	"0"	"100.3"	"100.000"	"64.7009"	"21274"	"21274"	"21255"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"175.1"	""	"140.9"	""	"135.7"	""	"116.4"	"0.2"	"187.2"	"194.3"	""	"956"	"31"	"36.000"	"29.000"	"0.038853298672644"	""	"0.0001301"	"0.004156"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPTEADELMK"	"[R].gPTEADELMk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"774.91772"	"1548.82817"	"1548.83437"	"-4.00"	"-0.00310"	"12/80"	"12"	"80"	"1441134.03417969"	"HCD"	"MS2"	"0"	"123.9"	"100.000"	"64.6465"	"21266"	"21266"	"21247"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"203.8"	""	"168.8"	""	"176.2"	""	"144.7"	""	"235.7"	"246.2"	""	"969"	"28"	"36.000"	"29.000"	"0.0776772391789325"	"27"	"0"	"0.0007577"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPTEADELMK"	"[R].gPTEADELMk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"774.92035"	"1548.83342"	"1548.83437"	"-0.61"	"-0.00047"	"9/80"	"9"	"80"	"1282074.53765869"	"HCD"	"MS2"	"0"	"123.8"	"100.000"	"64.9619"	"21391"	"21391"	"21374"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"217.2"	""	"172.1"	""	"187.4"	""	"126.2"	"0.6"	"229.0"	"240.0"	""	"1046"	"37"	"37.000"	"30.000"	"0.0116547158306837"	"23"	"0"	"0.0007618"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPTEADELMK"	"[R].gPTEADELMk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"774.92035"	"1548.83342"	"1548.83437"	"-0.61"	"-0.00047"	"16/80"	"16"	"80"	"1791862.93377686"	"HCD"	"MS2"	"0"	"167.7"	"100.000"	"64.9821"	"21384"	"21384"	"21367"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"294.5"	""	"239.0"	""	"257.3"	""	"162.2"	""	"301.5"	"334.9"	""	"1046"	"53"	"37.000"	"30.000"	"0.000278934150340026"	"24"	"0"	"3.212E-05"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPTEADELMK"	"[R].gPTEADELMk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"3"	"3"	"0.7917"	"0.0000"	"1"	"1"	"1"	"516.94946"	"1548.83384"	"1548.83437"	"-0.34"	"-0.00018"	"7/80"	"7"	"80"	"2113258.0736084"	"HCD"	"MS2"	"27.5523"	"65.5"	"100.000"	"64.7738"	"21314"	"21314"	"21294"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"110.2"	""	"76.8"	""	"107.1"	""	"75.2"	""	"121.9"	"129.1"	""	"1049"	"24"	"37.000"	"30.000"	"0.201718389682788"	"19"	"0.0001301"	"0.003872"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPTEADELMK"	"[R].gPTEADELMk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"516.94958"	"1548.83420"	"1548.83437"	"-0.11"	"-0.00005"	"7/80"	"7"	"80"	"1883940.86761475"	"HCD"	"MS2"	"27.26023"	"62.0"	"100.000"	"64.8335"	"21323"	"21323"	"21303"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"98.7"	""	"83.6"	""	"92.8"	""	"69.2"	""	"119.1"	"124.9"	""	"1051"	"34"	"37.000"	"30.000"	"0.0203035846441913"	"22"	"0.000936"	"0.01196"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WMPEITDEER"	"[K].wmPEITDEER.[L]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"775.87073"	"1550.73418"	"1550.73582"	"-1.06"	"-0.00082"	"6/82"	"6"	"82"	"258296.915893555"	"HCD"	"MS2"	"24.17539"	"17.4"	"100.000"	"67.1472"	"22281"	"22281"	"22252"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.7"	""	"16.1"	""	"19.5"	""	"36.3"	""	"36.6"	"31.2"	""	"397"	"11"	"32.000"	"25.000"	"1.51621403040172"	"13"	"0.00912"	"0.1186"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WMPEITDEER"	"[K].wmPEITDEER.[L]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"775.87164"	"1550.73601"	"1550.73582"	"0.12"	"0.00009"	"6/82"	"6"	"82"	"207020.147949219"	"HCD"	"MS2"	"0"	"14.4"	"100.000"	"67.2294"	"22299"	"22299"	"22274"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.8"	""	"15.5"	""	"12.8"	""	"31.3"	""	"25.6"	"29.7"	""	"406"	"21"	"33.000"	"26.000"	"0.162740646867699"	"20"	"0.003111"	"0.03155"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"775.89587"	"1550.78447"	"1550.78681"	"-1.51"	"-0.00117"	"9/96"	"9"	"96"	"1311809.28686523"	"HCD"	"MS2"	"0"	"73.0"	"100.000"	"69.3215"	"23166"	"23166"	"23145"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"108.7"	""	"106.7"	""	"83.6"	""	"86.2"	"1.4"	"143.3"	"162.8"	""	"803"	"56"	"36.000"	"29.000"	"9.39043151321731E-05"	"20"	"0"	"1.408E-05"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"517.59985"	"1550.78501"	"1550.78681"	"-1.17"	"-0.00060"	"8/96"	"8"	"96"	"2046237.31018066"	"HCD"	"MS2"	"8.39546"	"19.5"	"100.000"	"69.6502"	"23286"	"23286"	"23267"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.7"	""	"26.4"	""	"25.1"	""	"29.8"	""	"37.8"	"43.5"	""	"811"	"68"	"36.000"	"29.000"	"6.28045138969012E-06"	""	"0"	"0.0001685"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"775.89624"	"1550.78520"	"1550.78681"	"-1.04"	"-0.00081"	"9/96"	"9"	"96"	"984465.915710449"	"HCD"	"MS2"	"0"	"56.8"	"100.000"	"69.4591"	"23208"	"23208"	"23187"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"90.7"	""	"70.6"	""	"67.2"	""	"64.7"	"1.2"	"112.9"	"131.4"	""	"811"	"50"	"36.000"	"29.000"	"0.000364746269310429"	"21"	"0"	"2.169E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8525"	"0.0000"	"1"	"1"	"1"	"775.89679"	"1550.78630"	"1550.78681"	"-0.33"	"-0.00026"	"9/96"	"9"	"96"	"2212789.62994385"	"HCD"	"MS2"	"0"	"119.5"	"100.000"	"69.7494"	"23326"	"23326"	"23314"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"171.4"	""	"161.2"	""	"148.4"	""	"137.7"	""	"253.4"	"263.9"	""	"835"	"61"	"36.000"	"29.000"	"3.59464891537071E-05"	"25"	"0"	"2.022E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"517.60034"	"1550.78647"	"1550.78681"	"-0.22"	"-0.00011"	"8/96"	"8"	"96"	"2104970.74456787"	"HCD"	"MS2"	"9.760756"	"19.4"	"100.000"	"69.5011"	"23239"	"23239"	"23224"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.8"	""	"24.7"	""	"18.1"	""	"35.6"	"1.7"	"37.8"	"40.2"	""	"839"	"60"	"36.000"	"29.000"	"3.8347050479677E-05"	"25"	"0"	"4.347E-05"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"775.89734"	"1550.78740"	"1550.78681"	"0.38"	"0.00029"	"9/96"	"9"	"96"	"1503291.01184082"	"HCD"	"MS2"	"0"	"78.3"	"100.000"	"69.6439"	"23297"	"23297"	"23278"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"110.8"	""	"98.6"	""	"102.0"	""	"95.1"	""	"165.9"	"171.7"	""	"833"	"46"	"36.000"	"29.000"	"0.000965194871711871"	"19"	"0"	"4.845E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLTSQR"	"[K].aGEMTEVLTSQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"775.90393"	"1550.80058"	"1550.80457"	"-2.57"	"-0.00199"	"11/104"	"11"	"104"	"1201297.8972168"	"HCD"	"MS2"	"0"	"69.3"	"100.000"	"66.4238"	"21985"	"21985"	"21965"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"92.5"	""	"80.7"	""	"72.9"	""	"76.9"	""	"183.0"	"159.9"	""	"903"	"57"	"36.000"	"29.000"	"9.83235962217451E-05"	"24"	"0"	"3.756E-06"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLTSQR"	"[K].aGEMTEVLTSQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.8600"	"0.0000"	"1"	"1"	"1"	"775.90399"	"1550.80071"	"1550.80457"	"-2.49"	"-0.00193"	"9/104"	"9"	"104"	"1048885.49401855"	"HCD"	"MS2"	"4.643972"	"57.7"	"100.000"	"66.4826"	"21994"	"21994"	"21973"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"77.0"	""	"60.9"	""	"69.7"	""	"71.6"	""	"145.3"	"124.3"	""	"894"	"50"	"36.000"	"29.000"	"0.000404862472601495"	"23"	"0"	"9.096E-06"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLTSQR"	"[K].aGEMTEVLTSQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"775.90540"	"1550.80351"	"1550.80457"	"-0.68"	"-0.00053"	"9/104"	"9"	"104"	"984383.959411621"	"HCD"	"MS2"	"0"	"56.5"	"100.000"	"66.7889"	"22119"	"22119"	"22100"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"82.5"	""	"66.3"	""	"68.9"	""	"67.6"	""	"120.6"	"130.7"	""	"899"	"60"	"36.000"	"29.000"	"4.35240896389431E-05"	"29"	"0"	"2.981E-06"	"1.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLTSQR"	"[K].aGEMTEVLTSQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.8085"	"0.0000"	"1"	"1"	"1"	"517.60614"	"1550.80387"	"1550.80457"	"-0.45"	"-0.00024"	"14/104"	"14"	"104"	"3603534.66418457"	"HCD"	"MS2"	"15.82144"	"34.3"	"100.000"	"66.5495"	"22022"	"22022"	"22005"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.2"	""	"40.0"	""	"34.8"	""	"52.7"	""	"71.3"	"86.0"	""	"898"	"47"	"36.000"	"29.000"	"0.000867453774340599"	"24"	"0"	"0.0001085"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLTSQR"	"[K].aGEMTEVLTSQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"517.60614"	"1550.80387"	"1550.80457"	"-0.45"	"-0.00024"	"15/104"	"15"	"104"	"3571905.92633057"	"HCD"	"MS2"	"21.3085"	"34.4"	"100.000"	"66.4581"	"21999"	"21999"	"21981"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.5"	""	"38.2"	""	"38.4"	""	"60.6"	""	"67.0"	"82.8"	""	"898"	"41"	"36.000"	"29.000"	"0.00343752876503154"	"23"	"0"	"9.635E-05"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLTSQR"	"[K].aGEMTEVLTSQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"775.90564"	"1550.80400"	"1550.80457"	"-0.37"	"-0.00029"	"11/104"	"11"	"104"	"875310.741088867"	"HCD"	"MS2"	"0"	"49.3"	"100.000"	"66.7279"	"22110"	"22110"	"22093"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.3"	""	"58.1"	""	"62.6"	""	"61.1"	""	"112.2"	"119.0"	""	"896"	"49"	"36.000"	"29.000"	"0.000596043579254185"	"23"	"0"	"1.282E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITNLDVEQYR"	"[K].aITNLDVEQYR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"775.92206"	"1550.83684"	"1550.83759"	"-0.48"	"-0.00037"	"6/104"	"6"	"104"	"200131.798522949"	"HCD"	"MS2"	"9.612354"	"12.0"	"100.000"	"75.1432"	"25527"	"25527"	"25502"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.4"	""	"11.2"	""	"16.2"	""	"23.9"	""	"27.8"	"19.1"	""	"998"	"33"	"36.000"	"29.000"	"0.0241046342217847"	"15"	"0.0006732"	"0.009064"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITNLDVEQYR"	"[K].aITNLDVEQYR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"775.92285"	"1550.83843"	"1550.83759"	"0.54"	"0.00042"	"8/104"	"8"	"104"	"232981.526794434"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"75.2009"	"25539"	"25539"	"25520"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.7"	""	"16.6"	""	"19.0"	""	"32.7"	""	"30.9"	"26.6"	""	"990"	"47"	"36.000"	"29.000"	"0.00110816696359133"	"22"	"0"	"0.0002182"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTPQSDGSSSK"	"[K].vTPQSDGSSSk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"775.92352"	"1550.83977"	"1550.84262"	"-1.84"	"-0.00143"	"10/110"	"10"	"110"	"599941.139709473"	"HCD"	"MS2"	"0"	"43.0"	"100.000"	"30.5633"	"7446"	"7446"	"7426"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.5"	""	"50.1"	""	"55.1"	""	"78.7"	"0.7"	"71.8"	"75.7"	""	"983"	"55"	"36.000"	"29.000"	"0.000159046282380913"	"23"	"0"	"0.0009088"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTPQSDGSSSK"	"[K].vTPQSDGSSSk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.8769"	"0.0000"	"1"	"1"	"1"	"775.92499"	"1550.84270"	"1550.84262"	"0.05"	"0.00004"	"9/110"	"9"	"110"	"633066.340759277"	"HCD"	"MS2"	"0"	"42.8"	"100.000"	"30.6230"	"7459"	"7459"	"7434"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"86.1"	""	"48.9"	""	"57.0"	""	"68.2"	"0.6"	"77.1"	"66.8"	""	"980"	"65"	"36.000"	"29.000"	"1.3841911877087E-05"	"25"	"0"	"0.000238"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQVEEELFSVR"	"[R].sQVEEELFSVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"776.41333"	"1551.81938"	"1551.82160"	"-1.43"	"-0.00111"	"5/114"	"5"	"114"	"146047.48248291"	"HCD"	"MS2"	"15.32609"	"7.6"	"100.000"	"88.1394"	"30706"	"30706"	"30690"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.5"	""	"11.5"	""	"10.3"	""	"10.9"	""	"14.6"	"15.4"	""	"976"	"19"	"36.000"	"29.000"	"0.658293886704727"	"14"	"0.003111"	"0.0317"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQVEEELFSVR"	"[R].sQVEEELFSVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"776.41400"	"1551.82073"	"1551.82160"	"-0.56"	"-0.00044"	"7/114"	"7"	"114"	"163920.26348877"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"88.1673"	"30712"	"30712"	"30698"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.0"	""	"13.9"	""	"10.9"	""	"16.3"	""	"15.7"	"20.9"	""	"955"	"49"	"36.000"	"29.000"	"0.000568818058833071"	"21"	"0"	"0.0001826"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQVEEELFSVR"	"[R].sQVEEELFSVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"776.41418"	"1551.82109"	"1551.82160"	"-0.33"	"-0.00026"	"10/114"	"10"	"114"	"429166.154846191"	"HCD"	"MS2"	"0"	"24.2"	"100.000"	"88.4224"	"30810"	"30810"	"30802"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.4"	""	"30.3"	""	"36.7"	""	"34.7"	""	"45.0"	"54.4"	""	"940"	"56"	"36.000"	"29.000"	"0.000132463997769429"	"18"	"0"	"6.045E-06"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQVEEELFSVR"	"[R].sQVEEELFSVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"776.41431"	"1551.82134"	"1551.82160"	"-0.17"	"-0.00013"	"7/114"	"7"	"114"	"334303.483276367"	"HCD"	"MS2"	"0"	"18.5"	"100.000"	"88.4463"	"30816"	"30816"	"30806"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.8"	""	"21.8"	""	"27.2"	""	"21.1"	"1.1"	"34.5"	"43.3"	""	"942"	"50"	"36.000"	"29.000"	"0.000430547336732488"	"21"	"0"	"6.401E-05"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVLIK"	"[K].GDPIPNEQVLIk.[A]"	"K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"776.45032"	"1551.89336"	"1551.89437"	"-0.65"	"-0.00051"	"6/110"	"6"	"110"	"107748.023925781"	"HCD"	"MS2"	"35.0154"	"7.1"	"100.000"	"78.0992"	"26721"	"26721"	"26702"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.2"	""	"7.8"	""	"9.1"	""	"12.0"	""	"16.8"	"13.3"	""	"847"	"34"	"36.000"	"29.000"	"0.0158801066450962"	"28"	"0.0023"	"0.02345"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVLIK"	"[K].GDPIPNEQVLIk.[A]"	"K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"776.45044"	"1551.89360"	"1551.89437"	"-0.50"	"-0.00039"	"7/110"	"7"	"110"	"196267.467834473"	"HCD"	"MS2"	"24.18964"	"9.3"	"100.000"	"77.8107"	"26607"	"26607"	"26586"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.1"	""	"10.8"	""	"12.5"	""	"13.5"	""	"16.4"	"17.5"	""	"847"	"51"	"36.000"	"29.000"	"0.000301893258258581"	"27"	"0.0001301"	"0.004514"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVLIK"	"[K].GDPIPNEQVLIk.[A]"	"K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"776.45123"	"1551.89519"	"1551.89437"	"0.53"	"0.00041"	"4/110"	"4"	"110"	"102347.845092773"	"HCD"	"MS2"	"36.32471"	"7.2"	"100.000"	"78.1554"	"26736"	"26736"	"26713"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.6"	""	"9.3"	""	"9.5"	""	"11.1"	""	"13.9"	"14.6"	""	"841"	"8"	"36.000"	"29.000"	"6.09208564415572"	"14"	"0.009239"	"0.1205"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVLIK"	"[K].GDPIPNEQVLIk.[A]"	"K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"776.45178"	"1551.89629"	"1551.89437"	"1.23"	"0.00096"	"5/110"	"5"	"110"	"110686.912658691"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"77.8578"	"26617"	"26617"	"26594"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.0"	""	"9.9"	""	"6.9"	""	"8.8"	""	"12.1"	"10.9"	""	"827"	"32"	"36.000"	"29.000"	"0.023739715712273"	"28"	"0.003111"	"0.03073"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGYNQPDSK"	"[K].aDGYNQPDSk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"776.90283"	"1552.79839"	"1552.80076"	"-1.53"	"-0.00118"	"6/96"	"6"	"96"	"141112.951599121"	"HCD"	"MS2"	"0"	"12.3"	"100.000"	"34.7042"	"9120"	"9120"	"9099"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.7"	""	"9.9"	""	"9.0"	""	"25.4"	"1.4"	"24.7"	"25.4"	""	"812"	"24"	"36.000"	"29.000"	"0.155069373961059"	"20"	"0.002937"	"0.02802"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDmNEIk.[V]"	"N-Term(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"776.91711"	"1552.82695"	"1552.82928"	"-1.50"	"-0.00116"	"14/82"	"14"	"82"	"1409024.72906494"	"HCD"	"MS2"	"0"	"96.9"	"100.000"	"50.7019"	"15623"	"15623"	"15604"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.9"	""	"66.4"	""	"83.7"	""	"290.9"	"1.4"	"185.1"	"186.5"	""	"918"	"29"	"36.000"	"29.000"	"0.0581852206428751"	"22"	"0.00413"	"0.04523"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDmNEIk.[V]"	"N-Term(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"776.91724"	"1552.82720"	"1552.82928"	"-1.34"	"-0.00104"	"7/82"	"7"	"82"	"1667868.7489624"	"HCD"	"MS2"	"6.969103"	"115.0"	"100.000"	"50.3799"	"15492"	"15492"	"15474"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"128.9"	""	"104.2"	""	"91.4"	""	"359.0"	""	"211.7"	"196.2"	""	"917"	"37"	"36.000"	"29.000"	"0.00953540931037045"	"23"	"0.005067"	"0.05729"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDmNEIk.[V]"	"N-Term(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"776.91736"	"1552.82744"	"1552.82928"	"-1.19"	"-0.00092"	"7/82"	"7"	"82"	"2864942.18255615"	"HCD"	"MS2"	"0"	"188.8"	"100.000"	"50.8317"	"15665"	"15665"	"15649"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"208.6"	""	"142.5"	""	"151.1"	""	"604.7"	"0.0"	"351.7"	"333.2"	""	"919"	"37"	"36.000"	"29.000"	"0.00944681728854714"	"23"	"0"	"0.003285"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDmNEIk.[V]"	"N-Term(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"3"	"776.91846"	"1552.82964"	"1552.82928"	"0.23"	"0.00018"	"6/82"	"6"	"82"	"363383.284057617"	"HCD"	"MS2"	"0"	"29.2"	"100.000"	"51.1953"	"15813"	"15813"	"15794"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.3"	""	"23.1"	""	"29.7"	""	"78.4"	""	"54.8"	"59.3"	""	"954"	"26"	"36.000"	"29.000"	"0.129276140841193"	"23"	"0.003449"	"0.03446"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEEVVIAGMSGK"	"[-].mEEVVIAGmSGk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); M9(Oxidation); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"777.39038"	"1553.77349"	"1553.77525"	"-1.13"	"-0.00088"	"10/104"	"10"	"104"	"184551.195373535"	"HCD"	"MS2"	"38.18804"	"11.5"	"100.000"	"70.2411"	"23541"	"23541"	"23512"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.1"	""	"13.9"	""	"15.8"	""	"25.5"	""	"16.5"	"25.1"	""	"687"	"34"	"35.000"	"28.000"	"0.0145186669000235"	"15"	"0"	"0.001196"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEAWLAEAESR"	"[K].yEAWLAEAESR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"777.39380"	"1553.78032"	"1553.77974"	"0.38"	"0.00029"	"3/96"	"3"	"96"	"71314.6227416992"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"94.3060"	"33064"	"33064"	"33058"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.5"	""	"4.8"	""	"5.2"	""	"6.2"	""	"9.3"	"10.5"	""	"709"	"6"	"35.000"	"28.000"	"9.43227033698678"	"13"	"0.008837"	"0.1153"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGELEQDYK"	"[R].nGELEQDYk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"777.41364"	"1553.81999"	"1553.82116"	"-0.75"	"-0.00058"	"7/88"	"7"	"88"	"530129.543273926"	"HCD"	"MS2"	"39.61432"	"53.6"	"100.000"	"47.4481"	"14298"	"14298"	"14270"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.0"	""	"69.9"	""	"60.6"	""	"89.7"	""	"100.1"	"112.7"	""	"807"	"34"	"36.000"	"29.000"	"0.0154825873556135"	"22"	"0.0006732"	"0.009109"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGELEQDYK"	"[R].nGELEQDYk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"777.41418"	"1553.82109"	"1553.82116"	"-0.04"	"-0.00003"	"7/88"	"7"	"88"	"584368.131286621"	"HCD"	"MS2"	"20.31671"	"59.8"	"100.000"	"47.9194"	"14478"	"14478"	"14458"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"85.5"	""	"76.8"	""	"74.8"	""	"92.4"	"0.5"	"108.6"	"128.1"	""	"795"	"40"	"35.000"	"29.000"	"0.00398416332135965"	"22"	"0"	"0.0004293"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNLGAGNGNLQGPR"	"[R].gNLGAGnGNLQGPR.[H]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.2353"	"0.0000"	"1"	"1"	"1"	"777.91071"	"1554.81413"	"1554.81858"	"-2.86"	"-0.00222"	"13/130"	"13"	"130"	"761379.600158691"	"HCD"	"MS2"	"0"	"39.6"	"100.000"	"43.6054"	"12738"	"12738"	"12720"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.1"	""	"32.0"	""	"34.6"	""	"84.2"	"0.8"	"89.6"	"85.1"	""	"868"	"85"	"36.000"	"29.000"	"1.49447869951289E-07"	"27"	"0"	"2.112E-08"	"1.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNLGAGNGNLQGPR"	"[R].gNLGAGnGNLQGPR.[H]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.0685"	"0.0000"	"1"	"1"	"1"	"777.91168"	"1554.81609"	"1554.81858"	"-1.61"	"-0.00125"	"11/130"	"11"	"130"	"708234.929870605"	"HCD"	"MS2"	"0"	"36.9"	"100.000"	"43.7298"	"12779"	"12779"	"12762"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.3"	""	"31.8"	""	"34.0"	""	"75.4"	""	"87.4"	"81.0"	""	"842"	"73"	"36.000"	"29.000"	"2.10999825357082E-06"	"26"	"0"	"2.961E-07"	"1.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNLGAGNGNLQGPR"	"[R].gNLGAGnGNLQGPR.[H]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.4103"	"0.0000"	"1"	"1"	"1"	"777.91174"	"1554.81621"	"1554.81858"	"-1.53"	"-0.00119"	"10/130"	"10"	"130"	"252254.250244141"	"HCD"	"MS2"	"0"	"17.2"	"100.000"	"43.1624"	"12559"	"12559"	"12531"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.1"	""	"17.1"	""	"12.2"	""	"31.3"	""	"39.8"	"39.0"	""	"842"	"78"	"36.000"	"29.000"	"7.43501922508875E-07"	"25"	"0"	"9.596E-07"	"1.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNLGAGNGNLQGPR"	"[R].gNLGAGnGNLQGPR.[H]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.2600"	"0.0000"	"1"	"1"	"1"	"777.91180"	"1554.81633"	"1554.81858"	"-1.45"	"-0.00113"	"8/130"	"8"	"130"	"254699.318786621"	"HCD"	"MS2"	"0"	"16.5"	"100.000"	"43.2548"	"12586"	"12586"	"12556"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.2"	""	"18.4"	""	"18.5"	""	"27.8"	""	"36.4"	"36.0"	""	"842"	"50"	"36.000"	"29.000"	"0.000469117998642118"	"20"	"0"	"2.015E-05"	"0.837"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNLGAGNGNLQGPR"	"[R].gNLGAGnGNLQGPR.[H]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"777.91284"	"1554.81841"	"1554.81858"	"-0.11"	"-0.00009"	"5/130"	"5"	"130"	"109275.021240234"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"42.8152"	"12417"	"12417"	"12389"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.1"	""	"11.6"	""	"6.7"	""	"16.4"	""	"16.7"	"17.2"	""	"847"	"8"	"36.000"	"29.000"	"6.1923203338242"	"13"	"0.005874"	"0.06535"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNLGAGNGNLQGPR"	"[R].gNLGAGnGNLQGPR.[H]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.4074"	"0.0000"	"1"	"1"	"1"	"777.91406"	"1554.82085"	"1554.81858"	"1.46"	"0.00113"	"7/130"	"7"	"130"	"157031.009521484"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"42.9052"	"12443"	"12443"	"12416"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.4"	""	"8.2"	""	"7.3"	""	"19.8"	""	"23.4"	"21.9"	""	"858"	"27"	"36.000"	"29.000"	"0.0811815412398694"	"14"	"0"	"0.002286"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATADDELSFK"	"[K].aTADDELSFk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62994"	"Growth factor receptor-bound protein 2 OS=Rattus norvegicus OX=10116 GN=Grb2 PE=1 SV=1"	"P62994"	"Growth factor receptor-bound protein 2 OS=Rattus norvegicus OX=10116 GN=Grb2 PE=1 SV=1"	"0"	"2"	"2"	"0.4571"	"0.0000"	"1"	"1"	"1"	"777.92389"	"1554.84050"	"1554.84156"	"-0.68"	"-0.00053"	"9/84"	"9"	"84"	"573367.791442871"	"HCD"	"MS2"	"8.101489"	"56.7"	"100.000"	"70.7280"	"23739"	"23739"	"23717"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.9"	""	"53.0"	""	"62.1"	""	"113.5"	"1.3"	"127.7"	"117.7"	""	"838"	"70"	"36.000"	"29.000"	"4.53120825593837E-06"	""	"0"	"9.802E-06"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATADDELSFK"	"[K].aTADDELSFk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62994"	"Growth factor receptor-bound protein 2 OS=Rattus norvegicus OX=10116 GN=Grb2 PE=1 SV=1"	"P62994"	"Growth factor receptor-bound protein 2 OS=Rattus norvegicus OX=10116 GN=Grb2 PE=1 SV=1"	"0"	"2"	"2"	"0.4717"	"0.0000"	"1"	"1"	"1"	"777.92419"	"1554.84111"	"1554.84156"	"-0.29"	"-0.00022"	"9/84"	"9"	"84"	"628083.53125"	"HCD"	"MS2"	"4.95922"	"62.0"	"100.000"	"70.8817"	"23788"	"23788"	"23765"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.4"	""	"55.9"	""	"67.1"	""	"125.4"	""	"131.3"	"133.9"	""	"833"	"53"	"36.000"	"29.000"	"0.000198433506004456"	""	"0"	"1.447E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNLGAGNGNLQGPR"	"[R].gNLGAGnGnLQGPR.[H]"	"N-Term(TMT6plex); N7(Deamidated); N9(Deamidated)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.0806"	"0.0000"	"1"	"1"	"1"	"778.41321"	"1555.81914"	"1555.80260"	"10.63"	"0.00827"	"9/130"	"9"	"130"	"654947.447021484"	"HCD"	"MS2"	"0"	"37.8"	"100.000"	"43.5869"	"12731"	"12731"	"12716"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.2"	""	"32.5"	""	"31.8"	""	"68.5"	""	"89.3"	"86.7"	""	"785"	"62"	"35.000"	"28.000"	"2.64143337591595E-05"	"22"	"0"	"6.639E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTPLDTEVPLER"	"[K].gTPLDTEVPLER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"778.42938"	"1555.85149"	"1555.85290"	"-0.91"	"-0.00071"	"9/106"	"9"	"106"	"803879.033691406"	"HCD"	"MS2"	"3.149411"	"37.4"	"100.000"	"72.7108"	"24533"	"24533"	"24515"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.5"	""	"40.2"	""	"45.4"	""	"68.9"	""	"76.0"	"69.1"	""	"806"	"15"	"36.000"	"29.000"	"1.40057073061612"	"16"	"0.006061"	"0.06954"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTPLDTEVPLER"	"[K].gTPLDTEVPLER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"778.42975"	"1555.85222"	"1555.85290"	"-0.44"	"-0.00034"	"7/106"	"7"	"106"	"1045024.59381104"	"HCD"	"MS2"	"2.271708"	"45.1"	"100.000"	"72.6356"	"24516"	"24516"	"24497"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.2"	""	"45.1"	""	"61.6"	""	"77.6"	""	"82.7"	"86.3"	""	"811"	"24"	"36.000"	"29.000"	"0.171392123084702"	"14"	"0.001374"	"0.01751"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTPLDTEVPLER"	"[K].gTPLDTEVPLER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"778.43036"	"1555.85344"	"1555.85290"	"0.35"	"0.00027"	"14/106"	"14"	"106"	"287041.284118652"	"HCD"	"MS2"	"9.534422"	"18.4"	"100.000"	"72.9446"	"24642"	"24642"	"24621"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.5"	""	"24.4"	""	"25.9"	""	"25.1"	"1.4"	"37.9"	"35.5"	""	"806"	"19"	"36.000"	"29.000"	"0.505015893501391"	"14"	"0.0003538"	"0.006859"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTPLDTEVPLER"	"[K].gTPLDTEVPLER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"778.43042"	"1555.85356"	"1555.85290"	"0.42"	"0.00033"	"14/106"	"14"	"106"	"460906.825012207"	"HCD"	"MS2"	"0"	"23.0"	"100.000"	"73.0222"	"24660"	"24660"	"24638"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.8"	""	"23.3"	""	"33.2"	""	"33.6"	"1.5"	"41.7"	"42.2"	""	"796"	"34"	"35.000"	"29.000"	"0.0166296485925355"	"17"	"0.0001301"	"0.004639"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVDDCQDSWR"	"[K].sAVDDcQDSWR.[R]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"778.83704"	"1556.66680"	"1556.66709"	"-0.19"	"-0.00015"	"11/104"	"11"	"104"	"255594.592041016"	"HCD"	"MS2"	"47.63205"	"18.7"	"100.000"	"67.7370"	"22506"	"22506"	"22478"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.3"	""	"20.9"	""	"26.1"	""	"28.7"	""	"35.4"	"42.3"	""	"153"	"9"	"28.000"	"21.000"	"0.886464677458672"	"13"	"0"	"0.002355"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVDDCQDSWR"	"[K].sAVDDcQDSWR.[R]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"778.83728"	"1556.66728"	"1556.66709"	"0.12"	"0.00010"	"6/104"	"6"	"104"	"241564.093139648"	"HCD"	"MS2"	"31.589"	"17.5"	"100.000"	"67.6039"	"22467"	"22467"	"22440"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.5"	""	"18.9"	""	"20.2"	""	"30.2"	""	"32.6"	"32.5"	""	"153"	"12"	"28.000"	"21.000"	"0.4782571099734"	"14"	"0.0003538"	"0.006231"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYIPGQPVTAVVQR"	"[M].sYIPGQPVTAVVQR.[V]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q4QQV1"	"Tax1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Tax1bp3 PE=1 SV=1"	"Q4QQV1"	"Tax1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Tax1bp3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"778.92474"	"1556.84221"	"1556.84312"	"-0.58"	"-0.00045"	"5/136"	"5"	"136"	"187570.219299316"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"91.2349"	"31899"	"31899"	"31888"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.5"	""	"2.6"	""	"3.4"	""	"4.8"	""	"8.3"	"6.5"	"NoQuanLabels"	"838"	"25"	"36.000"	"29.000"	"0.120840919981005"	"14"	"0.0004639"	"0.007464"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYIPGQPVTAVVQR"	"[M].sYIPGQPVTAVVQR.[V]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q4QQV1"	"Tax1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Tax1bp3 PE=1 SV=1"	"Q4QQV1"	"Tax1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Tax1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"778.92517"	"1556.84307"	"1556.84312"	"-0.03"	"-0.00003"	"9/136"	"9"	"136"	"247966.826660156"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"91.5022"	"31997"	"31997"	"31988"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.6"	""	"3.7"	""	"4.2"	""	"2.4"	""	"5.0"	"4.9"	"NoQuanLabels"	"825"	"48"	"36.000"	"29.000"	"0.00064777465678759"	"18"	"0"	"0.0007632"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYIPGQPVTAVVQR"	"[M].sYIPGQPVTAVVQR.[V]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q4QQV1"	"Tax1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Tax1bp3 PE=1 SV=1"	"Q4QQV1"	"Tax1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Tax1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"778.92572"	"1556.84416"	"1556.84312"	"0.67"	"0.00052"	"7/136"	"7"	"136"	"182164.302368164"	"HCD"	"MS2"	"3.676903"	"2.5"	"100.000"	"91.5802"	"32032"	"32032"	"32024"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	"5.6"	""	"4.5"	""	"4.1"	""	"5.3"	"4.6"	"NoQuanLabels"	"831"	"32"	"36.000"	"29.000"	"0.028285966853725"	"16"	"0.000936"	"0.01312"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYIPGQPVTAVVQR"	"[M].sYIPGQPVTAVVQR.[V]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q4QQV1"	"Tax1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Tax1bp3 PE=1 SV=1"	"Q4QQV1"	"Tax1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Tax1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"778.92645"	"1556.84563"	"1556.84312"	"1.61"	"0.00126"	"4/136"	"4"	"136"	"122266.716552734"	"HCD"	"MS2"	"12.02174"	"2.2"	"100.000"	"91.3008"	"31928"	"31928"	"31921"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	"4.2"	""	""	""	"5.7"	""	"6.6"	"4.7"	"NoQuanLabels"	"849"	"11"	"36.000"	"29.000"	"3.68025316259363"	"14"	"0.007147"	"0.08223"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGPQEEQIK"	"[K].lGGPQEEQIk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.5938"	"0.0000"	"1"	"1"	"1"	"519.63916"	"1556.90293"	"1556.90483"	"-1.22"	"-0.00063"	"8/84"	"8"	"84"	"3381318.57116699"	"HCD"	"MS2"	"18.22146"	"84.0"	"100.000"	"55.9855"	"17776"	"17776"	"17757"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"127.1"	""	"98.2"	""	"116.4"	""	"137.5"	""	"169.2"	"153.6"	""	"776"	"32"	"35.000"	"28.000"	"0.0234872259404518"	"28"	"0"	"0.0007928"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGPQEEQIK"	"[K].lGGPQEEQIk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.2750"	"0.0000"	"1"	"1"	"1"	"778.95563"	"1556.90398"	"1556.90483"	"-0.55"	"-0.00042"	"14/84"	"14"	"84"	"457498.873474121"	"HCD"	"MS2"	"0"	"38.8"	"100.000"	"55.9624"	"17753"	"17753"	"17725"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.5"	""	"46.5"	""	"46.1"	""	"64.8"	"0.3"	"74.3"	"67.1"	""	"769"	"40"	"35.000"	"28.000"	"0.00375747711457509"	""	"0.0001301"	"0.003845"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGPQEEQIK"	"[K].lGGPQEEQIk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.3061"	"0.0000"	"1"	"1"	"1"	"778.95648"	"1556.90569"	"1556.90483"	"0.55"	"0.00043"	"8/84"	"8"	"84"	"694642.388122559"	"HCD"	"MS2"	"13.84424"	"58.5"	"100.000"	"55.8221"	"17710"	"17710"	"17681"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"94.1"	""	"71.6"	""	"72.6"	""	"93.3"	"0.8"	"110.4"	"111.9"	""	"765"	"49"	"35.000"	"28.000"	"0.000445278206249513"	""	"0"	"0.002395"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGPQEEQIK"	"[K].lGGPQEEQIk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.4828"	"0.0000"	"1"	"1"	"1"	"519.64008"	"1556.90567"	"1556.90483"	"0.54"	"0.00028"	"6/84"	"6"	"84"	"3093469.95275879"	"HCD"	"MS2"	"19.46494"	"78.0"	"100.000"	"56.1747"	"17839"	"17839"	"17821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"129.1"	""	"86.1"	""	"107.7"	""	"121.8"	""	"141.2"	"153.3"	""	"765"	"29"	"35.000"	"28.000"	"0.05147915854264"	""	"0"	"0.0008269"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPSENLVPSSAR"	"[R].aTPSENLVPSSAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI29"	"Cleavage and polyadenylation specificity factor subunit 7 OS=Rattus norvegicus OX=10116 GN=Cpsf7 PE=1 SV=1"	"Q5XI29"	"Cleavage and polyadenylation specificity factor subunit 7 OS=Rattus norvegicus OX=10116 GN=Cpsf7 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"779.42548"	"1557.84368"	"1557.84340"	"0.18"	"0.00014"	"7/128"	"7"	"128"	"246161.866638184"	"HCD"	"MS2"	"0"	"16.5"	"100.000"	"49.3353"	"15055"	"15055"	"15030"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.6"	""	"18.8"	""	"20.0"	""	"26.1"	""	"33.7"	"33.5"	""	"915"	"36"	"36.000"	"29.000"	"0.0106755706349356"	"22"	"0"	"0.002155"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPSENLVPSSAR"	"[R].aTPSENLVPSSAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI29"	"Cleavage and polyadenylation specificity factor subunit 7 OS=Rattus norvegicus OX=10116 GN=Cpsf7 PE=1 SV=1"	"Q5XI29"	"Cleavage and polyadenylation specificity factor subunit 7 OS=Rattus norvegicus OX=10116 GN=Cpsf7 PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"779.42603"	"1557.84477"	"1557.84340"	"0.88"	"0.00069"	"5/128"	"5"	"128"	"261794.507995605"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"48.9545"	"14912"	"14912"	"14895"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.2"	""	"21.5"	""	"17.4"	""	"24.4"	""	"34.4"	"37.6"	""	"913"	"27"	"36.000"	"29.000"	"0.090665232977364"	"19"	"0.0004639"	"0.007798"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDEAYMNK"	"[K].dVDEAYmNk.[V]"	"N-Term(TMT6plex); M7(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"779.89502"	"1558.78276"	"1558.78233"	"0.28"	"0.00022"	"5/72"	"5"	"72"	"368893.023071289"	"HCD"	"MS2"	"21.70526"	"28.3"	"100.000"	"46.9072"	"14077"	"14077"	"14046"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.3"	""	"16.4"	""	"21.0"	""	"78.8"	""	"67.2"	"62.6"	""	"680"	"18"	"35.000"	"28.000"	"0.481369885185408"	"14"	"0.006308"	"0.07127"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEGGILINSQGER"	"[R].gEGGILINSQGER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"779.92230"	"1558.83733"	"1558.83865"	"-0.85"	"-0.00066"	"6/126"	"6"	"126"	"284965.207580566"	"HCD"	"MS2"	"0"	"19.6"	"100.000"	"49.9865"	"15333"	"15333"	"15302"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.9"	""	"23.5"	""	"21.2"	""	"33.4"	"2.6"	"39.5"	"38.7"	""	"923"	"34"	"36.000"	"29.000"	"0.020614447777767"	"22"	"0"	"0.001876"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEGGILINSQGER"	"[R].gEGGILINSQGER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"779.92285"	"1558.83843"	"1558.83865"	"-0.14"	"-0.00011"	"7/126"	"7"	"126"	"298671.710449219"	"HCD"	"MS2"	"0"	"21.2"	"100.000"	"50.3788"	"15481"	"15481"	"15454"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.7"	""	"26.5"	""	"31.4"	""	"31.5"	""	"40.3"	"46.5"	""	"905"	"31"	"36.000"	"29.000"	"0.0391397983246001"	"14"	"0.0001301"	"0.00447"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEGTVAEIEAR"	"[K].aALEGTVAEIEAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"779.93488"	"1558.86247"	"1558.86380"	"-0.85"	"-0.00066"	"10/110"	"10"	"110"	"461768.374938965"	"HCD"	"MS2"	"13.15998"	"23.5"	"100.000"	"83.6313"	"28931"	"28931"	"28911"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.8"	""	"29.3"	""	"33.5"	""	"39.4"	""	"43.5"	"49.4"	""	"943"	"63"	"36.000"	"29.000"	"2.54965663268841E-05"	"23"	"0"	"1.336E-07"	"1.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEGTVAEIEAR"	"[K].aALEGTVAEIEAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"520.29236"	"1558.86252"	"1558.86380"	"-0.82"	"-0.00043"	"17/110"	"17"	"110"	"2214350.74664307"	"HCD"	"MS2"	"24.04043"	"15.0"	"100.000"	"83.7120"	"28961"	"28961"	"28945"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.9"	"8.5"	"21.1"	""	"18.5"	""	"26.4"	""	"24.0"	"29.0"	""	"944"	"66"	"36.000"	"29.000"	"1.15595785015072E-05"	"26"	"0"	"5.9E-06"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEGTVAEIEAR"	"[K].aALEGTVAEIEAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"520.29242"	"1558.86271"	"1558.86380"	"-0.70"	"-0.00037"	"18/110"	"18"	"110"	"2302143.3772583"	"HCD"	"MS2"	"23.58399"	"16.0"	"100.000"	"83.6732"	"28948"	"28948"	"28933"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.1"	"7.7"	"19.1"	""	"24.7"	""	"21.6"	""	"26.1"	"30.5"	""	"932"	"72"	"36.000"	"29.000"	"2.87995642464501E-06"	"26"	"0"	"5.828E-07"	"1.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEGTVAEIEAR"	"[K].aALEGTVAEIEAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.9067"	"0.0000"	"1"	"1"	"1"	"779.93506"	"1558.86284"	"1558.86380"	"-0.62"	"-0.00048"	"12/110"	"12"	"110"	"546792.866699219"	"HCD"	"MS2"	"0"	"26.0"	"100.000"	"84.2160"	"29163"	"29163"	"29147"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.6"	""	"34.9"	""	"41.2"	""	"43.3"	""	"42.2"	"52.8"	""	"932"	"75"	"36.000"	"29.000"	"1.53952206123156E-06"	"24"	"0"	"8.123E-08"	"1.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEGTVAEIEAR"	"[K].aALEGTVAEIEAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"779.93506"	"1558.86284"	"1558.86380"	"-0.62"	"-0.00048"	"12/110"	"12"	"110"	"835357.948303223"	"HCD"	"MS2"	"0"	"36.7"	"100.000"	"84.1838"	"29150"	"29150"	"29139"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.5"	""	"37.5"	""	"60.5"	""	"55.5"	""	"62.4"	"77.7"	""	"932"	"66"	"36.000"	"29.000"	"1.08739145702295E-05"	"23"	"0"	"1.93E-08"	"1.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEGTVAEIEAR"	"[K].aALEGTVAEIEAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8714"	"0.0000"	"1"	"1"	"1"	"779.93506"	"1558.86284"	"1558.86380"	"-0.62"	"-0.00048"	"12/110"	"12"	"110"	"4394417.2557373"	"HCD"	"MS2"	"0"	"162.9"	"100.000"	"83.8929"	"29034"	"29034"	"29027"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"232.6"	""	"181.5"	""	"231.1"	""	"289.8"	""	"269.0"	"343.1"	""	"932"	"70"	"36.000"	"29.000"	"4.50179709609252E-06"	"26"	"0"	"4.703E-08"	"1.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEGTVAEIEAR"	"[K].aALEGTVAEIEAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.8354"	"0.0000"	"1"	"1"	"1"	"520.29248"	"1558.86289"	"1558.86380"	"-0.59"	"-0.00030"	"18/110"	"18"	"110"	"6438515.37908936"	"HCD"	"MS2"	"4.602709"	"31.7"	"100.000"	"83.9943"	"29073"	"29073"	"29063"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.8"	"27.9"	"34.5"	""	"45.4"	""	"45.2"	"0.0"	"48.9"	"59.5"	""	"932"	"79"	"36.000"	"29.000"	"5.97566051517706E-07"	""	"0"	"1.511E-06"	"1.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEGTVAEIEAR"	"[K].aALEGTVAEIEAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.8171"	"0.0000"	"1"	"1"	"1"	"520.29248"	"1558.86289"	"1558.86380"	"-0.59"	"-0.00030"	"16/110"	"16"	"110"	"7984207.33721924"	"HCD"	"MS2"	"4.004394"	"38.0"	"100.000"	"83.9483"	"29056"	"29056"	"29049"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.0"	"26.7"	"33.5"	""	"53.3"	""	"56.6"	""	"59.4"	"84.6"	""	"932"	"82"	"36.000"	"29.000"	"2.97430784564795E-07"	""	"0"	"1.232E-07"	"1.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEGTVAEIEAR"	"[K].aALEGTVAEIEAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8657"	"0.0000"	"1"	"1"	"1"	"779.93549"	"1558.86370"	"1558.86380"	"-0.07"	"-0.00005"	"12/110"	"12"	"110"	"3698848.36914063"	"HCD"	"MS2"	"0"	"140.6"	"100.000"	"83.9343"	"29049"	"29049"	"29039"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"192.4"	""	"171.4"	""	"196.4"	""	"226.6"	""	"242.0"	"304.0"	""	"913"	"67"	"36.000"	"29.000"	"1.00332303192627E-05"	"26"	"0"	"1.631E-07"	"1.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEGTVAEIEAR"	"[K].aALEGTVAEIEAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8906"	"0.0000"	"1"	"1"	"1"	"779.93573"	"1558.86418"	"1558.86380"	"0.24"	"0.00019"	"10/110"	"10"	"110"	"366101.402038574"	"HCD"	"MS2"	"0"	"19.1"	"100.000"	"83.6540"	"28937"	"28937"	"28925"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.4"	""	"27.8"	""	"27.9"	""	"30.0"	""	"32.9"	"39.0"	""	"929"	"64"	"36.000"	"29.000"	"2.07484528554122E-05"	"23"	"0"	"5.96E-07"	"1.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEGTVAEIEAR"	"[K].aALEGTVAEIEAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.9216"	"0.0000"	"1"	"1"	"1"	"520.29303"	"1558.86454"	"1558.86380"	"0.47"	"0.00024"	"16/110"	"16"	"110"	"1288178.63677979"	"HCD"	"MS2"	"18.08041"	"7.9"	"100.000"	"84.2417"	"29173"	"29173"	"29159"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.8"	"2.5"	"6.6"	""	"10.4"	""	"17.1"	""	"11.6"	"18.6"	""	"928"	"51"	"36.000"	"29.000"	"0.000391307327602623"	"20"	"0"	"4.411E-05"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVEPDTEIK"	"[K].gIVEPDTEIk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97710"	"Tyrosine-protein phosphatase non-receptor type substrate 1 OS=Rattus norvegicus OX=10116 GN=Sirpa PE=1 SV=1"	"P97710"	"Tyrosine-protein phosphatase non-receptor type substrate 1 OS=Rattus norvegicus OX=10116 GN=Sirpa PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"779.95746"	"1558.90764"	"1558.90924"	"-1.03"	"-0.00080"	"12/80"	"12"	"80"	"270861.044433594"	"HCD"	"MS2"	"13.5217"	"23.4"	"100.000"	"68.9131"	"22985"	"22985"	"22965"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.0"	""	"28.2"	""	"27.7"	""	"43.1"	""	"49.4"	"45.6"	""	"777"	"30"	"35.000"	"28.000"	"0.0350260386959914"	"17"	"0.0008629"	"0.01046"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVEPDTEIK"	"[K].gIVEPDTEIk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97710"	"Tyrosine-protein phosphatase non-receptor type substrate 1 OS=Rattus norvegicus OX=10116 GN=Sirpa PE=1 SV=1"	"P97710"	"Tyrosine-protein phosphatase non-receptor type substrate 1 OS=Rattus norvegicus OX=10116 GN=Sirpa PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"779.95801"	"1558.90874"	"1558.90924"	"-0.32"	"-0.00025"	"13/80"	"13"	"80"	"381342.432312012"	"HCD"	"MS2"	"30.06232"	"30.4"	"100.000"	"68.4065"	"22793"	"22793"	"22767"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.7"	""	"32.9"	""	"34.1"	""	"65.1"	""	"58.4"	"55.1"	""	"777"	"38"	"35.000"	"28.000"	"0.00659767658981388"	"23"	"0"	"0.001414"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVEPDTEIK"	"[K].gIVEPDTEIk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97710"	"Tyrosine-protein phosphatase non-receptor type substrate 1 OS=Rattus norvegicus OX=10116 GN=Sirpa PE=1 SV=1"	"P97710"	"Tyrosine-protein phosphatase non-receptor type substrate 1 OS=Rattus norvegicus OX=10116 GN=Sirpa PE=1 SV=1"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"779.95807"	"1558.90886"	"1558.90924"	"-0.25"	"-0.00019"	"13/80"	"13"	"80"	"389797.128967285"	"HCD"	"MS2"	"13.31551"	"34.1"	"100.000"	"68.5715"	"22846"	"22846"	"22821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.1"	""	"32.5"	""	"46.2"	""	"59.5"	"1.8"	"72.0"	"64.9"	""	"775"	"39"	"35.000"	"28.000"	"0.0044083057325658"	"23"	"0"	"0.003182"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETEFYLGK"	"[R].dETEFYLGk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"780.41980"	"1559.83232"	"1559.83575"	"-2.19"	"-0.00171"	"7/70"	"7"	"70"	"201271.340087891"	"HCD"	"MS2"	"0"	"18.6"	"100.000"	"82.4698"	"28474"	"28474"	"28454"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.6"	""	"22.7"	""	"17.2"	""	"30.5"	""	"39.8"	"36.7"	""	"959"	"35"	"36.000"	"29.000"	"0.0160246521692522"	"15"	"0"	"0.002827"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETEFYLGK"	"[R].dETEFYLGk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"520.61627"	"1559.83426"	"1559.83575"	"-0.95"	"-0.00049"	"8/70"	"8"	"70"	"1649219.27349854"	"HCD"	"MS2"	"4.86998"	"41.2"	"100.000"	"82.7385"	"28584"	"28584"	"28565"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"73.2"	""	"41.0"	""	"49.8"	""	"66.6"	""	"83.9"	"75.8"	""	"946"	"20"	"36.000"	"29.000"	"0.441429284276976"	"17"	"0.001311"	"0.01572"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETEFYLGK"	"[R].dETEFYLGk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"780.42114"	"1559.83501"	"1559.83575"	"-0.47"	"-0.00037"	"7/70"	"7"	"70"	"180691.283630371"	"HCD"	"MS2"	"15.08751"	"16.9"	"100.000"	"83.0484"	"28704"	"28704"	"28694"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.7"	""	"18.1"	""	"20.8"	""	"32.6"	""	"33.8"	"32.5"	""	"936"	"29"	"36.000"	"29.000"	"0.0637156111394064"	"17"	"0"	"0.002804"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETEFYLGK"	"[R].dETEFYLGk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"520.61688"	"1559.83609"	"1559.83575"	"0.22"	"0.00012"	"9/70"	"9"	"70"	"1627450.67755127"	"HCD"	"MS2"	"2.507157"	"44.3"	"100.000"	"82.7056"	"28568"	"28568"	"28549"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.8"	""	"50.8"	""	"60.2"	""	"73.9"	""	"85.2"	"83.8"	""	"928"	"20"	"36.000"	"29.000"	"0.467216294347237"	"17"	"0.002795"	"0.02655"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETEFYLGK"	"[R].dETEFYLGk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"780.42175"	"1559.83623"	"1559.83575"	"0.31"	"0.00024"	"8/70"	"8"	"70"	"1504444.9576416"	"HCD"	"MS2"	"0"	"133.4"	"100.000"	"82.7802"	"28600"	"28600"	"28587"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"209.4"	""	"134.5"	""	"173.5"	""	"226.8"	""	"269.3"	"252.7"	""	"928"	"45"	"36.000"	"29.000"	"0.0013474665116715"	"28"	"0"	"0.0004657"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETEFYLGK"	"[R].dETEFYLGk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"780.42175"	"1559.83623"	"1559.83575"	"0.31"	"0.00024"	"16/70"	"16"	"70"	"1344395.753479"	"HCD"	"MS2"	"0"	"124.2"	"100.000"	"82.7656"	"28592"	"28592"	"28581"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"206.2"	""	"127.3"	""	"151.9"	""	"203.3"	""	"252.8"	"237.5"	""	"928"	"50"	"36.000"	"29.000"	"0.000437036772786598"	"24"	"0"	"0.0001842"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETEFYLGK"	"[R].dETEFYLGk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"780.42206"	"1559.83684"	"1559.83575"	"0.70"	"0.00055"	"7/70"	"7"	"70"	"214025.750854492"	"HCD"	"MS2"	"12.42864"	"21.0"	"100.000"	"82.5074"	"28492"	"28492"	"28469"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.4"	""	"20.3"	""	"24.0"	""	"37.6"	""	"44.8"	"37.3"	""	"925"	"39"	"36.000"	"29.000"	"0.00612507960027532"	"17"	"0"	"0.0009167"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVIEPMASEGLR"	"[R].nVIEPmASEGLR.[T]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"780.91510"	"1560.82292"	"1560.82531"	"-1.53"	"-0.00119"	"4/120"	"4"	"120"	"175275.764465332"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"54.2302"	"17064"	"17064"	"17033"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.3"	""	"18.7"	""	"17.7"	""	"17.0"	""	"26.9"	"26.6"	""	"879"	"11"	"36.000"	"29.000"	"3.37255374574519"	"13"	"0.002937"	"0.02794"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVIEPMASEGLR"	"[R].nVIEPmASEGLR.[T]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"780.91571"	"1560.82414"	"1560.82531"	"-0.75"	"-0.00058"	"10/120"	"10"	"120"	"682605.492492676"	"HCD"	"MS2"	"0"	"29.1"	"100.000"	"53.9105"	"16933"	"16933"	"16907"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.4"	""	"30.1"	""	"31.2"	""	"73.3"	""	"61.6"	"56.6"	""	"895"	"41"	"36.000"	"29.000"	"0.00353014902634303"	"23"	"0"	"0.002003"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVIEPMASEGLR"	"[R].nVIEPmASEGLR.[T]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"780.91589"	"1560.82451"	"1560.82531"	"-0.51"	"-0.00040"	"8/120"	"8"	"120"	"284398.966308594"	"HCD"	"MS2"	"0"	"16.3"	"100.000"	"54.3879"	"17113"	"17113"	"17088"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.1"	""	"21.0"	""	"17.8"	""	"40.3"	""	"28.6"	"31.9"	""	"895"	"23"	"36.000"	"29.000"	"0.217166603822549"	"22"	"0.001211"	"0.01512"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVIEPMASEGLR"	"[R].nVIEPmASEGLR.[T]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"780.91595"	"1560.82463"	"1560.82531"	"-0.43"	"-0.00034"	"9/120"	"9"	"120"	"528813.984680176"	"HCD"	"MS2"	"0"	"23.7"	"100.000"	"54.0718"	"16988"	"16988"	"16960"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.4"	""	"21.7"	""	"29.0"	""	"61.4"	"0.6"	"45.9"	"46.2"	""	"897"	"36"	"36.000"	"29.000"	"0.0113962625843886"	"22"	"0"	"0.00246"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANIDEEMLQR"	"[R].lANIDEEMLQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"780.91644"	"1560.82561"	"1560.82531"	"0.19"	"0.00015"	"6/100"	"6"	"100"	"180518.160949707"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"86.5107"	"30065"	"30065"	"30052"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.6"	""	"11.9"	""	"14.5"	""	"19.7"	""	"25.8"	"24.0"	""	"895"	"26"	"36.000"	"29.000"	"0.125543155298339"	"23"	"0.001635"	"0.01988"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVIEPMASEGLR"	"[R].nVIEPmASEGLR.[T]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"520.94672"	"1560.82560"	"1560.82531"	"0.18"	"0.00010"	"4/120"	"4"	"120"	"1505594.54248047"	"HCD"	"MS2"	"26.23959"	"30.6"	"100.000"	"54.1962"	"17039"	"17039"	"17008"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.4"	""	"37.4"	""	"40.7"	""	"53.0"	"0.3"	"49.2"	"58.6"	""	"898"	"6"	"36.000"	"29.000"	"10.4772266996417"	"13"	"0.003449"	"0.03305"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANIDEEMLQR"	"[R].lANIDEEMLQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"780.91669"	"1560.82610"	"1560.82531"	"0.51"	"0.00039"	"10/100"	"10"	"100"	"168947.668457031"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"86.5133"	"30062"	"30062"	"30055"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.7"	""	"11.0"	""	"14.1"	""	"17.8"	""	"23.2"	"19.1"	""	"895"	"20"	"36.000"	"29.000"	"0.468590025252777"	"21"	"0.003922"	"0.03985"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEMPEAAVK"	"[R].iDEMPEAAVk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VHK7"	"Hepatoma-derived growth factor OS=Rattus norvegicus OX=10116 GN=Hdgf PE=1 SV=2"	"Q8VHK7"	"Hepatoma-derived growth factor OS=Rattus norvegicus OX=10116 GN=Hdgf PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"780.93805"	"1560.86882"	"1560.87075"	"-1.24"	"-0.00096"	"14/80"	"14"	"80"	"315690.344238281"	"HCD"	"MS2"	"0"	"26.7"	"100.000"	"75.4597"	"25654"	"25654"	"25641"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.7"	""	"36.2"	""	"39.1"	""	"33.9"	""	"47.0"	"59.7"	""	"1029"	"45"	"37.000"	"30.000"	"0.00148725479947704"	"20"	"0"	"0.003422"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEMPEAAVK"	"[R].iDEMPEAAVk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VHK7"	"Hepatoma-derived growth factor OS=Rattus norvegicus OX=10116 GN=Hdgf PE=1 SV=2"	"Q8VHK7"	"Hepatoma-derived growth factor OS=Rattus norvegicus OX=10116 GN=Hdgf PE=1 SV=2"	"0"	"2"	"2"	"0.8364"	"0.0000"	"1"	"1"	"1"	"780.93817"	"1560.86907"	"1560.87075"	"-1.08"	"-0.00084"	"15/80"	"15"	"80"	"299600.951477051"	"HCD"	"MS2"	"0"	"24.4"	"100.000"	"75.6498"	"25721"	"25721"	"25701"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.0"	""	"31.8"	""	"33.1"	""	"25.4"	"0.4"	"46.8"	"55.2"	""	"1029"	"55"	"37.000"	"30.000"	"0.000176760564194485"	"25"	"0"	"0.0003034"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EASLLEPTDK"	"[K].eASLLEPTDk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"780.94733"	"1560.88738"	"1560.88851"	"-0.73"	"-0.00057"	"7/88"	"7"	"88"	"367618.036682129"	"HCD"	"MS2"	"16.69058"	"29.3"	"100.000"	"67.1681"	"22289"	"22289"	"22268"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.9"	""	"20.4"	""	"27.4"	""	"82.2"	""	"60.9"	"63.7"	""	"1033"	"44"	"37.000"	"30.000"	"0.00225460427352046"	""	"0"	"0.0004219"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EASLLEPTDK"	"[K].eASLLEPTDk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"0"	"2"	"2"	"0.7045"	"0.0000"	"1"	"1"	"1"	"780.94800"	"1560.88872"	"1560.88851"	"0.13"	"0.00011"	"7/88"	"7"	"88"	"343055.161010742"	"HCD"	"MS2"	"22.91212"	"26.4"	"100.000"	"67.2710"	"22316"	"22316"	"22290"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.8"	""	"22.9"	""	"22.7"	""	"68.2"	""	"69.6"	"48.6"	""	"1031"	"44"	"37.000"	"30.000"	"0.00209521536184667"	"29"	"0"	"0.001818"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQSEVEGVK"	"[R].nLQSEVEGVk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"0"	"2"	"2"	"0.7541"	"0.0000"	"1"	"1"	"1"	"780.95294"	"1560.89861"	"1560.89974"	"-0.73"	"-0.00057"	"9/96"	"9"	"96"	"468323.733215332"	"HCD"	"MS2"	"6.04621"	"39.0"	"100.000"	"64.8425"	"21327"	"21327"	"21303"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.5"	""	"32.3"	""	"36.1"	""	"81.0"	""	"99.9"	"85.5"	""	"978"	"61"	"36.000"	"29.000"	"3.52621557320438E-05"	""	"0"	"1.363E-05"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQSEVEGVK"	"[R].nLQSEVEGVk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"780.95313"	"1560.89897"	"1560.89974"	"-0.49"	"-0.00038"	"9/96"	"9"	"96"	"439453.771118164"	"HCD"	"MS2"	"13.23313"	"37.9"	"100.000"	"64.7782"	"21316"	"21316"	"21294"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.4"	""	"37.0"	""	"38.1"	""	"79.3"	""	"91.4"	"80.0"	""	"975"	"56"	"36.000"	"29.000"	"0.000130609455834928"	""	"0"	"3.728E-05"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYMNQVEETR"	"[R].yYMNQVEETR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"781.37976"	"1561.75224"	"1561.75181"	"0.28"	"0.00022"	"6/88"	"6"	"88"	"513770.950805664"	"HCD"	"MS2"	"0"	"36.9"	"100.000"	"54.3424"	"17107"	"17107"	"17081"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.6"	""	"45.3"	""	"55.8"	""	"48.7"	"0.1"	"63.8"	"66.8"	""	"501"	"37"	"33.000"	"26.000"	"0.0052821135155829"	"26"	"0"	"0.0007589"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYMNQVEETR"	"[R].yYMNQVEETR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"781.38007"	"1561.75286"	"1561.75181"	"0.67"	"0.00052"	"12/88"	"12"	"88"	"473451.111022949"	"HCD"	"MS2"	"7.874411"	"33.7"	"100.000"	"54.5898"	"17195"	"17195"	"17168"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.6"	""	"48.7"	""	"57.8"	""	"41.8"	""	"58.4"	"58.3"	""	"498"	"25"	"33.000"	"26.000"	"0.086735991443967"	"17"	"0"	"0.001653"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEEPEDPSNR"	"[K].lFEEPEDPSNR.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"P36876"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1"	"P36876; P97888"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2c PE=2 SV=1"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"781.38782"	"1561.76836"	"1561.76957"	"-0.77"	"-0.00060"	"7/94"	"7"	"94"	"354064.263549805"	"HCD"	"MS2"	"22.43234"	"21.2"	"100.000"	"65.1413"	"21463"	"21463"	"21437"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.1"	""	"23.8"	""	"27.0"	""	"34.5"	""	"40.0"	"37.3"	""	"586"	"28"	"34.000"	"27.000"	"0.0440420596064377"	"15"	"0"	"0.002553"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEEPEDPSNR"	"[K].lFEEPEDPSNR.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"P36876"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1"	"P36876; P97888"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2c PE=2 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"781.38788"	"1561.76848"	"1561.76957"	"-0.70"	"-0.00054"	"9/94"	"9"	"94"	"357885.153320313"	"HCD"	"MS2"	"18.05725"	"28.5"	"100.000"	"65.4390"	"21584"	"21584"	"21563"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.5"	""	"25.6"	""	"36.8"	""	"50.6"	"0.4"	"51.9"	"59.3"	""	"582"	"22"	"34.000"	"27.000"	"0.180257352847343"	"19"	"0.009302"	"0.121"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEEPEDPSNR"	"[K].lFEEPEDPSNR.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"P36876"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1"	"P36876; P97888"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2c PE=2 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"781.38873"	"1561.77019"	"1561.76957"	"0.40"	"0.00031"	"9/94"	"9"	"94"	"270822.595092773"	"HCD"	"MS2"	"0"	"19.5"	"100.000"	"65.1916"	"21468"	"21468"	"21441"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.8"	""	"19.9"	""	"23.1"	""	"44.9"	""	"37.0"	"35.4"	""	"590"	"18"	"34.000"	"27.000"	"0.425424028699836"	"15"	"0.007627"	"0.09217"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFDDLPLAEQR"	"[R].eFDDLPLAEQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64578"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1"	"Q64578"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"781.40619"	"1561.80510"	"1561.80595"	"-0.55"	"-0.00043"	"8/98"	"8"	"98"	"256166.352294922"	"HCD"	"MS2"	"12.29453"	"16.1"	"100.000"	"83.4578"	"28863"	"28863"	"28852"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.6"	""	"5.2"	""	"2.6"	""	"7.5"	""	"13.2"	"118.0"	""	"827"	"49"	"36.000"	"29.000"	"0.000479154436770145"	"18"	"0"	"0.002089"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFDDLPLAEQR"	"[R].eFDDLPLAEQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64578"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1"	"Q64578"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"781.40631"	"1561.80535"	"1561.80595"	"-0.39"	"-0.00030"	"10/98"	"10"	"98"	"156950.759338379"	"HCD"	"MS2"	"48.3733"	"11.8"	"100.000"	"83.1873"	"28759"	"28759"	"28743"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.4"	""	"5.2"	""	"9.9"	""	"11.4"	""	"14.9"	"61.8"	""	"827"	"24"	"36.000"	"29.000"	"0.174773471998827"	"14"	"0.002056"	"0.0224"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFDDLPLAEQR"	"[R].eFDDLPLAEQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64578"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1"	"Q64578"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"781.40637"	"1561.80547"	"1561.80595"	"-0.31"	"-0.00024"	"10/98"	"10"	"98"	"261006.128417969"	"HCD"	"MS2"	"7.373957"	"17.4"	"100.000"	"83.4642"	"28863"	"28863"	"28853"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.0"	""	"4.6"	""	"7.5"	""	"7.7"	""	"11.3"	"124.3"	""	"835"	"29"	"36.000"	"29.000"	"0.0563192003482016"	"16"	"0.003111"	"0.0314"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QHTFVETESVR"	"[K].qHTFVETESVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"521.27667"	"1561.81546"	"1561.81719"	"-1.10"	"-0.00057"	"8/112"	"8"	"112"	"2287785.30548096"	"HCD"	"MS2"	"13.16096"	"35.0"	"100.000"	"32.8117"	"8355"	"8355"	"8336"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.6"	""	"45.8"	""	"40.4"	""	"58.6"	""	"74.8"	"72.0"	""	"906"	"46"	"36.000"	"29.000"	"0.0010377630467038"	"20"	"0"	"0.0002666"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADQIETQQLMR"	"[K].aDQIETQQLMR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"781.41217"	"1561.81706"	"1561.82056"	"-2.24"	"-0.00175"	"9/104"	"9"	"104"	"648106.996826172"	"HCD"	"MS2"	"0"	"40.6"	"100.000"	"60.1701"	"19453"	"19453"	"19441"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.3"	""	"43.8"	""	"52.9"	""	"56.2"	""	"79.7"	"89.5"	""	"904"	"55"	"36.000"	"29.000"	"0.000156364598777407"	"23"	"0"	"3.56E-06"	"1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADQIETQQLMR"	"[K].aDQIETQQLMR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"781.41235"	"1561.81743"	"1561.82056"	"-2.00"	"-0.00156"	"10/104"	"10"	"104"	"855213.411560059"	"HCD"	"MS2"	"0"	"51.4"	"100.000"	"60.0440"	"19400"	"19400"	"19393"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"89.8"	""	"48.9"	""	"73.0"	""	"67.6"	"0.1"	"108.1"	"100.1"	""	"907"	"52"	"36.000"	"29.000"	"0.000275789223079899"	"25"	"0"	"2.222E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADQIETQQLMR"	"[K].aDQIETQQLMR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"781.41290"	"1561.81853"	"1561.82056"	"-1.30"	"-0.00101"	"9/104"	"9"	"104"	"1108477.13269043"	"HCD"	"MS2"	"0"	"64.5"	"100.000"	"59.8585"	"19336"	"19336"	"19332"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"119.4"	""	"63.1"	""	"74.9"	""	"86.4"	""	"139.7"	"133.3"	""	"915"	"46"	"36.000"	"29.000"	"0.00107248468300887"	"23"	"0"	"6.732E-06"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADQIETQQLMR"	"[K].aDQIETQQLMR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"781.41364"	"1561.81999"	"1561.82056"	"-0.36"	"-0.00028"	"9/104"	"9"	"104"	"1099920.0291748"	"HCD"	"MS2"	"0"	"61.0"	"100.000"	"60.3080"	"19497"	"19497"	"19491"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"102.9"	""	"63.0"	""	"76.0"	""	"91.1"	""	"133.0"	"117.5"	""	"914"	"49"	"36.000"	"29.000"	"0.00062218021988694"	"22"	"0"	"1.496E-05"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDNSALDK"	"[R].vLEDNSALDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"521.29895"	"1561.88230"	"1561.88376"	"-0.94"	"-0.00049"	"11/94"	"11"	"94"	"3136972.99530029"	"HCD"	"MS2"	"15.26378"	"75.5"	"100.000"	"67.6273"	"22476"	"22476"	"22456"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.9"	""	"79.7"	"2.2"	"70.8"	""	"155.3"	""	"163.4"	"178.0"	""	"1049"	"40"	"37.000"	"30.000"	"0.00496301391136358"	"22"	"0"	"0.001687"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDNSALDK"	"[R].vLEDNSALDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"521.29895"	"1561.88230"	"1561.88376"	"-0.94"	"-0.00049"	"11/94"	"11"	"94"	"3391100.05249023"	"HCD"	"MS2"	"6.587666"	"84.4"	"100.000"	"67.9200"	"22595"	"22595"	"22578"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"86.5"	""	"89.5"	""	"84.5"	""	"153.0"	""	"190.4"	"200.5"	""	"1049"	"45"	"37.000"	"30.000"	"0.00163209521881211"	"25"	"0"	"0.00261"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDNSALDK"	"[R].vLEDNSALDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.6279"	"0.0000"	"1"	"1"	"1"	"521.29895"	"1561.88230"	"1561.88376"	"-0.94"	"-0.00049"	"11/94"	"11"	"94"	"3487057.66693115"	"HCD"	"MS2"	"10.12916"	"84.6"	"100.000"	"68.0505"	"22633"	"22633"	"22615"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"73.7"	""	"81.8"	""	"93.4"	""	"156.4"	"0.3"	"201.3"	"198.6"	""	"1049"	"43"	"37.000"	"30.000"	"0.00243077909401683"	""	"0"	"0.0007737"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDNSALDK"	"[R].vLEDNSALDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"781.44501"	"1561.88274"	"1561.88376"	"-0.65"	"-0.00051"	"7/94"	"7"	"94"	"205708.120727539"	"HCD"	"MS2"	"19.59218"	"15.5"	"100.000"	"68.3433"	"22753"	"22753"	"22726"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.0"	""	"13.0"	""	"19.6"	""	"27.0"	""	"34.7"	"39.3"	""	"1068"	"22"	"37.000"	"30.000"	"0.311559685682179"	"26"	"0.0023"	"0.02349"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDNSALDK"	"[R].vLEDNSALDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"781.44513"	"1561.88298"	"1561.88376"	"-0.50"	"-0.00039"	"18/94"	"18"	"94"	"3237245.29998779"	"HCD"	"MS2"	"2.41012"	"250.8"	"100.000"	"67.8808"	"22579"	"22579"	"22562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"240.8"	""	"247.3"	""	"221.2"	""	"485.1"	""	"568.7"	"626.3"	""	"1068"	"68"	"37.000"	"30.000"	"9.34418131725567E-06"	""	"0"	"3.973E-05"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDNSALDK"	"[R].vLEDNSALDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"521.29919"	"1561.88303"	"1561.88376"	"-0.47"	"-0.00024"	"7/94"	"7"	"94"	"2722398.12158203"	"HCD"	"MS2"	"15.74886"	"68.3"	"100.000"	"67.7581"	"22514"	"22514"	"22494"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.5"	""	"72.5"	""	"59.8"	""	"133.5"	"0.1"	"165.6"	"150.5"	""	"1068"	"39"	"37.000"	"30.000"	"0.00658477980944236"	"24"	"0"	"0.001889"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDNSALDK"	"[R].vLEDNSALDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"781.44525"	"1561.88323"	"1561.88376"	"-0.34"	"-0.00027"	"9/94"	"9"	"94"	"1459558.27227783"	"HCD"	"MS2"	"26.29049"	"115.0"	"100.000"	"67.5831"	"22458"	"22458"	"22440"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"134.0"	""	"122.8"	""	"118.4"	""	"211.7"	""	"250.4"	"257.2"	""	"1062"	"66"	"37.000"	"30.000"	"1.465866841653E-05"	""	"0"	"2.177E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDNSALDK"	"[R].vLEDNSALDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"781.44537"	"1561.88347"	"1561.88376"	"-0.18"	"-0.00014"	"18/94"	"18"	"94"	"3178052.29626465"	"HCD"	"MS2"	"2.523123"	"252.3"	"100.000"	"68.0069"	"22616"	"22616"	"22599"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"244.9"	""	"232.2"	""	"219.8"	""	"470.8"	"2.0"	"599.6"	"635.9"	""	"1044"	"68"	"37.000"	"30.000"	"8.76335697459976E-06"	""	"0"	"3.467E-05"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDNSALDK"	"[R].vLEDNSALDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"781.44580"	"1561.88432"	"1561.88376"	"0.36"	"0.00028"	"9/94"	"9"	"94"	"1481929.25482178"	"HCD"	"MS2"	"31.36972"	"121.0"	"100.000"	"67.7162"	"22497"	"22497"	"22478"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"126.6"	""	"130.0"	""	"122.1"	""	"227.3"	""	"260.5"	"287.1"	""	"1067"	"63"	"37.000"	"30.000"	"2.50111939374499E-05"	""	"0"	"2.597E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDATEYIHR"	"[K].sLEDATEYIHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"3"	"3"	"0.8548"	"0.0000"	"1"	"1"	"1"	"521.60498"	"1562.80039"	"1562.80120"	"-0.52"	"-0.00027"	"13/92"	"13"	"92"	"1832297.27746582"	"HCD"	"MS2"	"16.86582"	"23.9"	"100.000"	"65.4823"	"21586"	"21586"	"21565"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.1"	""	"23.6"	""	"35.0"	""	"30.0"	""	"56.0"	"45.0"	""	"849"	"62"	"36.000"	"29.000"	"2.99831801784627E-05"	"25"	"0"	"7.81E-06"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDATEYIHR"	"[K].sLEDATEYIHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"521.60504"	"1562.80057"	"1562.80120"	"-0.40"	"-0.00021"	"14/92"	"14"	"92"	"999637.878356934"	"HCD"	"MS2"	"12.77145"	"16.5"	"100.000"	"65.5936"	"21647"	"21647"	"21624"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.7"	""	"21.4"	""	"24.0"	""	"25.3"	""	"30.3"	"34.2"	""	"849"	"48"	"36.000"	"29.000"	"0.00060238991795702"	"21"	"0"	"5.959E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDATEYIHR"	"[K].sLEDATEYIHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"3"	"3"	"0.7674"	"0.0000"	"1"	"1"	"1"	"521.60602"	"1562.80350"	"1562.80120"	"1.47"	"0.00077"	"13/92"	"13"	"92"	"980647.807128906"	"HCD"	"MS2"	"14.22829"	"21.9"	"100.000"	"65.2638"	"21513"	"21513"	"21485"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.6"	""	"20.7"	""	"26.7"	""	"28.3"	""	"64.5"	"43.6"	""	"870"	"43"	"36.000"	"29.000"	"0.00227242342214617"	"25"	"0"	"6.951E-05"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGQEDQGLTK"	"[R].eGQEDQGLTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q00438; Q9Z118"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1;Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"Q00438; Q9Z118"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"0"	"2"	"2"	"0.6600"	"0.0000"	"1"	"1"	"1"	"781.92456"	"1562.84184"	"1562.84262"	"-0.50"	"-0.00039"	"8/102"	"8"	"102"	"368860.983520508"	"HCD"	"MS2"	"0"	"34.6"	"100.000"	"38.8616"	"10806"	"10806"	"10780"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.0"	""	"39.1"	""	"41.9"	""	"48.1"	""	"69.2"	"55.7"	""	"1048"	"50"	"37.000"	"30.000"	"0.000515621819418834"	""	"0"	"0.0001194"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGQEDQGLTK"	"[R].eGQEDQGLTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q00438; Q9Z118"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1;Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"Q00438; Q9Z118"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"781.92499"	"1562.84270"	"1562.84262"	"0.05"	"0.00004"	"9/102"	"9"	"102"	"524277.56628418"	"HCD"	"MS2"	"0"	"47.2"	"100.000"	"38.5257"	"10669"	"10669"	"10645"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"101.1"	""	"50.6"	""	"50.9"	""	"78.0"	"0.2"	"80.7"	"85.4"	""	"1054"	"51"	"37.000"	"30.000"	"0.000447518110344137"	"29"	"0"	"3.273E-05"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGQEDQGLTK"	"[R].eGQEDQGLTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q00438; Q9Z118"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1;Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"Q00438; Q9Z118"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"781.92535"	"1562.84343"	"1562.84262"	"0.52"	"0.00040"	"9/102"	"9"	"102"	"1133583.6461792"	"HCD"	"MS2"	"0"	"106.3"	"100.000"	"38.7980"	"10771"	"10771"	"10741"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"260.5"	""	"112.1"	""	"123.1"	""	"157.5"	"0.3"	"180.3"	"169.9"	""	"1069"	"66"	"37.000"	"30.000"	"1.50642567676085E-05"	""	"0"	"9.946E-06"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTDEDVDALK"	"[R].vTDEDVDALk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.7170"	"0.0000"	"1"	"1"	"1"	"781.93732"	"1562.86736"	"1562.86777"	"-0.27"	"-0.00021"	"15/82"	"15"	"82"	"251962.156921387"	"HCD"	"MS2"	"0"	"23.0"	"100.000"	"71.2339"	"23946"	"23946"	"23921"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.2"	""	"20.9"	""	"27.8"	""	"39.0"	""	"51.8"	"51.4"	""	"1056"	"53"	"37.000"	"30.000"	"0.000295552013589418"	""	"0"	"0.0009552"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTDEDVDALK"	"[R].vTDEDVDALk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"781.93787"	"1562.86846"	"1562.86777"	"0.44"	"0.00034"	"14/82"	"14"	"82"	"256188.000061035"	"HCD"	"MS2"	"0"	"23.8"	"100.000"	"71.3532"	"23981"	"23981"	"23955"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.5"	""	"21.5"	""	"25.5"	""	"43.1"	""	"50.1"	"56.9"	""	"1085"	"45"	"37.000"	"30.000"	"0.00154667741012087"	"25"	"0"	"0.001302"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETTEDLVAK"	"[K].vETTEDLVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.8507"	"0.0000"	"1"	"1"	"1"	"781.95544"	"1562.90361"	"1562.90416"	"-0.35"	"-0.00027"	"9/80"	"9"	"80"	"1552972.41534424"	"HCD"	"MS2"	"0"	"125.0"	"100.000"	"69.3562"	"23180"	"23180"	"23161"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"219.7"	""	"180.9"	""	"204.4"	""	"180.9"	"1.9"	"196.9"	"195.7"	""	"933"	"67"	"36.000"	"29.000"	"1.00427267924892E-05"	"27"	"0"	"3.042E-05"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETTEDLVAK"	"[K].vETTEDLVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"781.95551"	"1562.90373"	"1562.90416"	"-0.27"	"-0.00021"	"9/80"	"9"	"80"	"1297103.55664063"	"HCD"	"MS2"	"1.884045"	"99.0"	"100.000"	"69.5353"	"23239"	"23239"	"23219"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"156.6"	""	"139.0"	""	"177.4"	""	"137.6"	""	"164.6"	"166.6"	""	"927"	"63"	"36.000"	"29.000"	"2.58850935260521E-05"	"25"	"0"	"2.836E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETTEDLVAK"	"[K].vETTEDLVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"781.95557"	"1562.90386"	"1562.90416"	"-0.19"	"-0.00015"	"9/80"	"9"	"80"	"609822.553466797"	"HCD"	"MS2"	"0"	"51.8"	"100.000"	"69.0612"	"23060"	"23060"	"23038"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.7"	""	"77.5"	""	"85.6"	""	"79.4"	""	"81.2"	"79.0"	""	"927"	"60"	"36.000"	"29.000"	"4.31568500279339E-05"	"22"	"0"	"9.469E-06"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETTEDLVAK"	"[K].vETTEDLVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"781.95563"	"1562.90398"	"1562.90416"	"-0.12"	"-0.00009"	"18/80"	"18"	"80"	"611769.686584473"	"HCD"	"MS2"	"0"	"53.5"	"100.000"	"69.2170"	"23109"	"23109"	"23091"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"102.4"	""	"79.5"	""	"71.9"	""	"77.5"	""	"89.0"	"88.5"	""	"927"	"68"	"36.000"	"29.000"	"7.43104238584834E-06"	"29"	"0"	"4.059E-06"	"0.988"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMVGDEASELR"	"[K].dLMVGDEASELR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"0.8072"	"0.0000"	"1"	"1"	"1"	"782.39709"	"1563.78691"	"1563.78859"	"-1.07"	"-0.00084"	"10/106"	"10"	"106"	"1069981.64227295"	"HCD"	"MS2"	"2.6053"	"51.2"	"100.000"	"76.2579"	"25978"	"25978"	"25961"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"90.6"	""	"75.8"	""	"73.6"	""	"49.7"	"1.1"	"105.9"	"88.5"	""	"821"	"83"	"36.000"	"29.000"	"1.99670157936345E-07"	""	"0"	"6.02E-08"	"1.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMVGDEASELR"	"[K].dLMVGDEASELR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"782.39728"	"1563.78728"	"1563.78859"	"-0.84"	"-0.00065"	"8/106"	"8"	"106"	"388280.385864258"	"HCD"	"MS2"	"0"	"20.9"	"100.000"	"75.9717"	"25862"	"25862"	"25840"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.6"	""	"27.1"	""	"29.5"	""	"30.2"	"0.9"	"40.6"	"33.6"	""	"830"	"37"	"36.000"	"29.000"	"0.00851232304212609"	"23"	"0"	"0.0002215"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMVGDEASELR"	"[K].dLMVGDEASELR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"3"	"3"	"0.7907"	"0.0000"	"1"	"1"	"1"	"521.93420"	"1563.78806"	"1563.78859"	"-0.34"	"-0.00018"	"12/106"	"12"	"106"	"694666.516296387"	"HCD"	"MS2"	"30.06371"	"16.0"	"100.000"	"76.2542"	"25967"	"25967"	"25949"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.7"	""	"19.0"	""	"23.2"	""	"33.9"	""	"26.9"	"29.7"	""	"826"	"43"	"36.000"	"29.000"	"0.00197219590020626"	"24"	"0"	"0.0001273"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMVGDEASELR"	"[K].dLMVGDEASELR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"0.7978"	"0.0000"	"1"	"1"	"1"	"782.39789"	"1563.78850"	"1563.78859"	"-0.06"	"-0.00004"	"10/106"	"10"	"106"	"760481.783325195"	"HCD"	"MS2"	"0"	"38.4"	"100.000"	"76.3953"	"26025"	"26025"	"26008"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"69.3"	""	"60.2"	""	"59.6"	""	"40.2"	""	"66.0"	"68.5"	""	"817"	"89"	"36.000"	"29.000"	"5.3726934395053E-08"	""	"0"	"1.65E-08"	"1.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMVGDEASELR"	"[K].dLMVGDEASELR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"0.8310"	"0.0000"	"1"	"1"	"1"	"782.39819"	"1563.78911"	"1563.78859"	"0.33"	"0.00026"	"9/106"	"9"	"106"	"527450.297363281"	"HCD"	"MS2"	"0"	"24.3"	"100.000"	"76.0926"	"25902"	"25902"	"25871"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.7"	""	"36.9"	""	"35.1"	""	"25.6"	""	"41.2"	"42.2"	""	"828"	"71"	"36.000"	"29.000"	"3.4914058971441E-06"	"29"	"0"	"5.269E-06"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYIDSNNNPER"	"[K].iYIDSNNNPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"521.93622"	"1563.79410"	"1563.79645"	"-1.50"	"-0.00078"	"11/102"	"11"	"102"	"1592733.76391602"	"HCD"	"MS2"	"32.94587"	"36.5"	"100.000"	"51.2384"	"15842"	"15842"	"15815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.7"	""	"46.6"	""	"44.4"	""	"66.7"	"0.0"	"68.2"	"67.6"	""	"868"	"41"	"36.000"	"29.000"	"0.0036098547665856"	"23"	"0"	"0.0004932"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYIDSNNNPER"	"[K].iYIDSNNNPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"521.93634"	"1563.79447"	"1563.79645"	"-1.27"	"-0.00066"	"11/102"	"11"	"102"	"1702074.67883301"	"HCD"	"MS2"	"19.81741"	"35.3"	"100.000"	"51.5870"	"15973"	"15973"	"15947"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.1"	""	"46.2"	""	"47.2"	""	"54.1"	""	"68.9"	"63.5"	""	"871"	"46"	"36.000"	"29.000"	"0.000983984277931235"	"26"	"0"	"0.0005644"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYIDSNNNPER"	"[K].iYIDSNNNPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"782.40143"	"1563.79558"	"1563.79645"	"-0.56"	"-0.00044"	"8/102"	"8"	"102"	"1147601.93218994"	"HCD"	"MS2"	"7.709872"	"63.4"	"100.000"	"51.4787"	"15929"	"15929"	"15899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"108.9"	""	"76.8"	""	"84.0"	""	"102.3"	"0.6"	"112.1"	"115.3"	""	"897"	"46"	"36.000"	"29.000"	"0.00116348944391029"	"18"	"0"	"0.0001748"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYIDSNNNPER"	"[K].iYIDSNNNPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"782.40149"	"1563.79570"	"1563.79645"	"-0.48"	"-0.00037"	"6/102"	"6"	"102"	"879209.575256348"	"HCD"	"MS2"	"18.5279"	"47.1"	"100.000"	"51.1164"	"15792"	"15792"	"15767"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"77.8"	""	"57.1"	""	"65.7"	""	"80.5"	"0.1"	"81.0"	"83.1"	""	"897"	"42"	"36.000"	"29.000"	"0.00300443247323312"	"17"	"0"	"8.094E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYIDSNNNPER"	"[K].iYIDSNNNPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"782.40161"	"1563.79595"	"1563.79645"	"-0.32"	"-0.00025"	"8/102"	"8"	"102"	"870634.273193359"	"HCD"	"MS2"	"3.771828"	"48.9"	"100.000"	"51.7692"	"16047"	"16047"	"16027"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"73.4"	""	"55.2"	""	"63.7"	""	"72.7"	"1.8"	"98.7"	"98.2"	""	"898"	"50"	"36.000"	"29.000"	"0.000412331335821128"	"18"	"0"	"0.0001313"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYIDSNNNPER"	"[K].iYIDSNNNPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.9574"	"0.0000"	"1"	"1"	"1"	"782.40179"	"1563.79631"	"1563.79645"	"-0.09"	"-0.00007"	"8/102"	"8"	"102"	"1030822.92358398"	"HCD"	"MS2"	"5.719975"	"57.4"	"100.000"	"51.4089"	"15911"	"15911"	"15893"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.6"	""	"78.7"	""	"75.4"	""	"91.2"	"0.1"	"108.9"	"107.9"	""	"893"	"47"	"36.000"	"29.000"	"0.000899127877563555"	"17"	"0"	"6.098E-05"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGSQGVPGPPAPAR"	"[R].sGGSQGVPGPPAPAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q498D9"	"PDZ domain-containing protein GIPC2 OS=Rattus norvegicus OX=10116 GN=Gipc2 PE=2 SV=1"	"Q498D9"	"PDZ domain-containing protein GIPC2 OS=Rattus norvegicus OX=10116 GN=Gipc2 PE=2 SV=1"	"0"	"2"	"2"	"0.9138"	"0.0000"	"1"	"1"	"1"	"782.42523"	"1563.84319"	"1563.84407"	"-0.56"	"-0.00044"	"11/138"	"11"	"138"	"484078.962890625"	"HCD"	"MS2"	"0"	"24.7"	"100.000"	"36.4288"	"9820"	"9820"	"9795"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.2"	""	"25.1"	""	"23.5"	""	"52.2"	"0.9"	"52.9"	"49.9"	""	"1124"	"58"	"37.000"	"30.000"	"9.85680842035068E-05"	"21"	"0"	"1.604E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGSQGVPGPPAPAR"	"[R].sGGSQGVPGPPAPAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q498D9"	"PDZ domain-containing protein GIPC2 OS=Rattus norvegicus OX=10116 GN=Gipc2 PE=2 SV=1"	"Q498D9"	"PDZ domain-containing protein GIPC2 OS=Rattus norvegicus OX=10116 GN=Gipc2 PE=2 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"782.42603"	"1563.84477"	"1563.84407"	"0.45"	"0.00035"	"17/138"	"17"	"138"	"441638.557250977"	"HCD"	"MS2"	"0"	"21.6"	"100.000"	"36.6161"	"9890"	"9890"	"9864"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.5"	""	"24.5"	""	"25.5"	""	"40.5"	""	"43.4"	"44.0"	""	"1098"	"40"	"37.000"	"30.000"	"0.00538979620717971"	"17"	"0"	"9.635E-05"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGSQGVPGPPAPAR"	"[R].sGGSQGVPGPPAPAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q498D9"	"PDZ domain-containing protein GIPC2 OS=Rattus norvegicus OX=10116 GN=Gipc2 PE=2 SV=1"	"Q498D9"	"PDZ domain-containing protein GIPC2 OS=Rattus norvegicus OX=10116 GN=Gipc2 PE=2 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"782.42621"	"1563.84514"	"1563.84407"	"0.68"	"0.00054"	"6/138"	"6"	"138"	"242759.652526855"	"HCD"	"MS2"	"0"	"13.7"	"100.000"	"36.1051"	"9689"	"9689"	"9667"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.1"	""	"15.1"	""	"19.4"	""	"20.9"	""	"30.2"	"27.6"	""	"1075"	"30"	"37.000"	"30.000"	"0.0574616997582179"	"22"	"0"	"0.002018"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGSQGVPGPPAPAR"	"[R].sGGSQGVPGPPAPAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q498D9"	"PDZ domain-containing protein GIPC2 OS=Rattus norvegicus OX=10116 GN=Gipc2 PE=2 SV=1"	"Q498D9"	"PDZ domain-containing protein GIPC2 OS=Rattus norvegicus OX=10116 GN=Gipc2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"782.42822"	"1563.84917"	"1563.84407"	"3.26"	"0.00255"	"5/138"	"5"	"138"	"204421.738708496"	"HCD"	"MS2"	"100"	"10.4"	"100.000"	"36.3038"	"9763"	"9763"	"9742"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.9"	""	"12.4"	""	"16.9"	""	"18.9"	""	"19.5"	"20.7"	""	"1096"	"4"	"37.000"	"30.000"	"23.3765576303272"	"13"	"0.003449"	"0.035"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"521.95862"	"1563.86130"	"1563.86302"	"-1.10"	"-0.00057"	"10/98"	"10"	"98"	"4213264.72943115"	"HCD"	"MS2"	"34.2186"	"107.5"	"100.000"	"59.2718"	"19102"	"19102"	"19080"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"166.7"	""	"135.9"	""	"130.3"	""	"174.8"	"3.2"	"202.1"	"206.3"	""	"1066"	"35"	"37.000"	"30.000"	"0.0159855362262042"	"18"	"0"	"0.001182"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"521.95880"	"1563.86185"	"1563.86302"	"-0.75"	"-0.00039"	"11/98"	"11"	"98"	"5047986.64434814"	"HCD"	"MS2"	"4.860185"	"122.6"	"100.000"	"59.5711"	"19224"	"19224"	"19206"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"196.6"	""	"159.5"	""	"166.5"	""	"161.6"	"3.5"	"227.2"	"246.6"	""	"1092"	"43"	"37.000"	"30.000"	"0.00264358112700918"	"19"	"0"	"0.0004261"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8481"	"0.0000"	"1"	"1"	"1"	"782.43475"	"1563.86223"	"1563.86302"	"-0.51"	"-0.00040"	"10/98"	"10"	"98"	"1577030.42694092"	"HCD"	"MS2"	"0"	"122.5"	"100.000"	"59.6126"	"19241"	"19241"	"19222"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"193.6"	""	"151.5"	""	"148.2"	""	"178.5"	""	"233.1"	"257.2"	""	"1093"	"79"	"37.000"	"30.000"	"7.49186885209094E-07"	"30"	"0"	"8.137E-07"	"1.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"521.95905"	"1563.86258"	"1563.86302"	"-0.28"	"-0.00015"	"11/98"	"11"	"98"	"4589293.40344238"	"HCD"	"MS2"	"29.99607"	"113.9"	"100.000"	"59.0469"	"19025"	"19025"	"19005"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"181.4"	""	"135.6"	""	"149.3"	""	"182.6"	""	"212.1"	"218.2"	""	"1089"	"36"	"37.000"	"30.000"	"0.0149967752896763"	"22"	"0"	"0.0008162"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"782.43494"	"1563.86260"	"1563.86302"	"-0.27"	"-0.00021"	"8/98"	"8"	"98"	"1158596.32122803"	"HCD"	"MS2"	"41.06957"	"92.2"	"100.000"	"59.3592"	"19138"	"19138"	"19110"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"125.4"	""	"118.8"	""	"119.5"	""	"140.2"	""	"187.8"	"186.0"	""	"1089"	"4"	"37.000"	"30.000"	"19.9985212621207"	"13"	"0.001211"	"0.01489"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"521.95911"	"1563.86277"	"1563.86302"	"-0.16"	"-0.00009"	"11/98"	"11"	"98"	"4788399.4105835"	"HCD"	"MS2"	"7.054563"	"122.4"	"100.000"	"59.3412"	"19145"	"19145"	"19126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"180.2"	""	"149.5"	""	"168.0"	""	"178.7"	"0.4"	"237.1"	"247.1"	""	"1080"	"43"	"37.000"	"30.000"	"0.00261453078495414"	"19"	"0"	"0.000367"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8358"	"0.0000"	"1"	"1"	"1"	"782.43512"	"1563.86296"	"1563.86302"	"-0.04"	"-0.00003"	"17/98"	"17"	"98"	"2295733.24932861"	"HCD"	"MS2"	"0"	"171.3"	"100.000"	"59.2971"	"19112"	"19112"	"19096"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"267.1"	""	"220.9"	""	"258.4"	""	"250.5"	""	"314.3"	"311.5"	""	"1079"	"67"	"37.000"	"30.000"	"1.20501221421707E-05"	"27"	"0"	"1.944E-06"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"782.43524"	"1563.86321"	"1563.86302"	"0.12"	"0.00009"	"10/98"	"10"	"98"	"2624404.0993042"	"HCD"	"MS2"	"0"	"193.1"	"100.000"	"59.3389"	"19144"	"19144"	"19126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"294.2"	""	"231.9"	""	"269.7"	""	"280.8"	""	"377.4"	"377.6"	""	"1111"	"76"	"37.000"	"30.000"	"1.24647640866133E-06"	""	"0"	"1.048E-06"	"1.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"782.43536"	"1563.86345"	"1563.86302"	"0.27"	"0.00021"	"17/98"	"17"	"98"	"1208411.43939209"	"HCD"	"MS2"	"14.85119"	"93.4"	"100.000"	"59.0235"	"19016"	"19016"	"18989"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"140.8"	""	"132.1"	""	"136.5"	""	"142.6"	""	"167.3"	"167.0"	""	"1112"	"64"	"37.000"	"30.000"	"2.0752708773442E-05"	"29"	"0"	"2.577E-06"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPTEADELMK"	"[R].gPTEADELmk.[R]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"3"	"782.91772"	"1564.82817"	"1564.82928"	"-0.71"	"-0.00055"	"12/80"	"12"	"80"	"481024.381286621"	"HCD"	"MS2"	"0"	"38.0"	"100.000"	"50.8198"	"15671"	"15671"	"15651"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.9"	""	"35.3"	""	"42.8"	""	"85.3"	""	"78.6"	"80.3"	""	"1059"	"29"	"37.000"	"30.000"	"0.0727555225769127"	"26"	"0.005617"	"0.06433"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPTEADELMK"	"[R].gPTEADELmk.[R]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"782.91846"	"1564.82964"	"1564.82928"	"0.23"	"0.00018"	"8/80"	"8"	"80"	"448826.384033203"	"HCD"	"MS2"	"10.15346"	"36.4"	"100.000"	"51.2046"	"15817"	"15817"	"15794"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.7"	""	"35.6"	""	"37.4"	""	"91.7"	""	"74.3"	"69.3"	""	"1063"	"41"	"37.000"	"30.000"	"0.0043003447041331"	"28"	"0.001211"	"0.01544"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEGGTWSVEK"	"[K].nEGGTWSVEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6863"	"0.0000"	"1"	"1"	"1"	"782.92163"	"1564.83599"	"1564.83714"	"-0.74"	"-0.00058"	"8/104"	"8"	"104"	"907579.76550293"	"HCD"	"MS2"	"0"	"84.2"	"100.000"	"56.9944"	"18188"	"18188"	"18163"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"151.6"	""	"112.2"	""	"120.3"	""	"118.9"	"0.4"	"145.8"	"147.3"	""	"1109"	"51"	"37.000"	"30.000"	"0.000425501945851129"	""	"0"	"2.863E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEGGTWSVEK"	"[K].nEGGTWSVEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"782.92194"	"1564.83660"	"1564.83714"	"-0.35"	"-0.00027"	"8/104"	"8"	"104"	"519091.737854004"	"HCD"	"MS2"	"0"	"52.2"	"100.000"	"57.1393"	"18233"	"18233"	"18208"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"85.1"	""	"88.6"	""	"77.7"	""	"78.0"	""	"83.9"	"82.9"	""	"1115"	"44"	"37.000"	"30.000"	"0.00246175524399472"	"27"	"0"	"0.0003512"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEGGTWSVEK"	"[K].nEGGTWSVEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7551"	"0.0000"	"1"	"1"	"1"	"782.92206"	"1564.83684"	"1564.83714"	"-0.19"	"-0.00015"	"8/104"	"8"	"104"	"710897.309936523"	"HCD"	"MS2"	"0"	"65.5"	"100.000"	"57.3100"	"18316"	"18316"	"18297"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.5"	""	"93.2"	""	"99.1"	""	"80.3"	"1.0"	"121.4"	"122.2"	""	"1115"	"49"	"37.000"	"30.000"	"0.000719854745039545"	"28"	"0"	"5.966E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEGGTWSVEK"	"[K].nEGGTWSVEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"782.92212"	"1564.83696"	"1564.83714"	"-0.12"	"-0.00009"	"8/104"	"8"	"104"	"1114481.1418457"	"HCD"	"MS2"	"0"	"105.0"	"100.000"	"57.4434"	"18356"	"18356"	"18335"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"175.5"	""	"148.6"	""	"155.2"	""	"134.8"	""	"189.1"	"192.5"	""	"1096"	"46"	"37.000"	"30.000"	"0.00145137807595647"	"28"	"0"	"9.311E-05"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDITNDR"	"[K].mDATANDITNDR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.37469"	"1565.74211"	"1565.74270"	"-0.38"	"-0.00029"	"13/118"	"13"	"118"	"368048.740844727"	"HCD"	"MS2"	"0"	"30.8"	"100.000"	"48.3552"	"14655"	"14655"	"14633"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.9"	""	"40.5"	""	"32.4"	""	"34.5"	""	"58.8"	"64.7"	""	"476"	"16"	"33.000"	"26.000"	"0.59782897069928"	"14"	"0.0002479"	"0.005168"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDITNDR"	"[K].mDATANDITNDR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.37506"	"1565.74285"	"1565.74270"	"0.09"	"0.00007"	"7/118"	"7"	"118"	"497024.170288086"	"HCD"	"MS2"	"24.75337"	"38.0"	"100.000"	"48.1212"	"14572"	"14572"	"14546"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.0"	""	"48.1"	""	"48.1"	""	"41.6"	""	"81.8"	"81.0"	""	"480"	"19"	"33.000"	"26.000"	"0.289875320425627"	"14"	"0"	"0.003275"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEEVHDLER"	"[K].fYEEVHDLER.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q9Z2G8; Q5U2Z3"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1; Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"522.59735"	"1565.77750"	"1565.77974"	"-1.43"	"-0.00075"	"7/84"	"7"	"84"	"286502.966430664"	"HCD"	"MS2"	"38.41544"	"13.8"	"100.000"	"70.7048"	"23730"	"23730"	"23701"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.1"	""	"16.0"	""	"20.1"	""	"26.0"	""	"21.2"	"30.0"	""	"749"	"8"	"35.000"	"28.000"	"5.36354368277943"	"13"	"0.002973"	"0.02826"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEEVHDLER"	"[K].fYEEVHDLER.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q9Z2G8; Q5U2Z3"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1; Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"3"	"3"	"0.9750"	"0.0000"	"1"	"1"	"1"	"522.59766"	"1565.77842"	"1565.77974"	"-0.84"	"-0.00044"	"6/84"	"6"	"84"	"2999334.36114502"	"HCD"	"MS2"	"22.67538"	"47.4"	"100.000"	"70.2506"	"23545"	"23545"	"23528"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.4"	""	"36.9"	""	"62.7"	""	"79.8"	""	"99.9"	"104.1"	""	"758"	"40"	"35.000"	"28.000"	"0.00411755311350868"	"16"	"0"	"0.0003064"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEEVHDLER"	"[K].fYEEVHDLER.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q9Z2G8; Q5U2Z3"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1; Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"522.59766"	"1565.77842"	"1565.77974"	"-0.84"	"-0.00044"	"7/84"	"7"	"84"	"2640376.18597412"	"HCD"	"MS2"	"14.88974"	"44.5"	"100.000"	"69.9551"	"23424"	"23424"	"23406"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.2"	""	"49.4"	""	"55.5"	""	"79.7"	""	"88.7"	"91.0"	""	"758"	"30"	"35.000"	"28.000"	"0.0407041987277332"	"14"	"0"	"0.001688"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEEVHDLER"	"[K].fYEEVHDLER.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q9Z2G8; Q5U2Z3"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1; Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"522.59778"	"1565.77878"	"1565.77974"	"-0.61"	"-0.00032"	"6/84"	"6"	"84"	"2789430.80371094"	"HCD"	"MS2"	"23.46178"	"44.6"	"100.000"	"70.3953"	"23590"	"23590"	"23573"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.2"	""	"45.8"	""	"51.0"	""	"85.0"	"1.3"	"85.7"	"97.8"	""	"759"	"42"	"35.000"	"28.000"	"0.00214393581941269"	"17"	"0"	"0.0002032"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEEVHDLER"	"[K].fYEEVHDLER.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q9Z2G8; Q5U2Z3"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1; Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"522.59784"	"1565.77896"	"1565.77974"	"-0.49"	"-0.00026"	"6/84"	"6"	"84"	"2573529.07104492"	"HCD"	"MS2"	"19.10105"	"40.9"	"100.000"	"70.0975"	"23468"	"23468"	"23445"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.8"	""	"50.0"	""	"42.7"	""	"75.5"	"3.0"	"84.1"	"73.2"	""	"752"	"40"	"35.000"	"28.000"	"0.00372552811279681"	"15"	"0"	"0.0002322"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASLTSAASIDGSR"	"[R].tASLTSAASIDGSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VBU2"	"Protein NDRG2 OS=Rattus norvegicus OX=10116 GN=Ndrg2 PE=1 SV=1"	"Q8VBU2"	"Protein NDRG2 OS=Rattus norvegicus OX=10116 GN=Ndrg2 PE=1 SV=1"	"0"	"2"	"2"	"0.9714"	"0.0000"	"1"	"1"	"1"	"783.42017"	"1565.83306"	"1565.83323"	"-0.11"	"-0.00009"	"9/128"	"9"	"128"	"262863.193969727"	"HCD"	"MS2"	"17.73814"	"21.8"	"100.000"	"54.5573"	"17182"	"17182"	"17152"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.4"	""	"27.4"	""	"28.0"	""	"29.0"	"1.9"	"45.9"	"44.2"	""	"1025"	"35"	"37.000"	"30.000"	"0.0175668490605056"	"16"	"0"	"0.0006107"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASLTSAASIDGSR"	"[R].tASLTSAASIDGSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VBU2"	"Protein NDRG2 OS=Rattus norvegicus OX=10116 GN=Ndrg2 PE=1 SV=1"	"Q8VBU2"	"Protein NDRG2 OS=Rattus norvegicus OX=10116 GN=Ndrg2 PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"783.42114"	"1565.83501"	"1565.83323"	"1.14"	"0.00089"	"7/128"	"7"	"128"	"253593.436645508"	"HCD"	"MS2"	"0"	"21.4"	"100.000"	"54.3447"	"17108"	"17108"	"17081"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.9"	""	"21.4"	""	"28.9"	""	"35.4"	""	"47.0"	"41.8"	""	"1032"	"21"	"37.000"	"30.000"	"0.43415989308892"	"18"	"0"	"0.001448"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEDCFILDHGR"	"[R].sEDcFILDHGR.[D]"	"N-Term(TMT6plex); C4(Methylthio)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"522.91174"	"1566.72068"	"1566.72421"	"-2.26"	"-0.00118"	"6/94"	"6"	"94"	"611710.116455078"	"HCD"	"MS2"	"40.76299"	"12.8"	"100.000"	"75.5919"	"25698"	"25698"	"25675"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.7"	""	"15.2"	""	"17.3"	""	"18.8"	""	"23.9"	"27.6"	""	"345"	"21"	"32.000"	"25.000"	"0.133902627618449"	"14"	"0.0001301"	"0.004617"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEDCFILDHGR"	"[R].sEDcFILDHGR.[D]"	"N-Term(TMT6plex); C4(Methylthio)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"3"	"3"	"0.8293"	"0.0000"	"1"	"1"	"1"	"522.91248"	"1566.72287"	"1566.72421"	"-0.86"	"-0.00045"	"12/94"	"12"	"94"	"2728241.56616211"	"HCD"	"MS2"	"3.969056"	"23.4"	"100.000"	"75.8105"	"25796"	"25796"	"25777"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.3"	""	"33.2"	""	"31.4"	""	"30.4"	""	"44.0"	"43.4"	""	"355"	"41"	"32.000"	"25.000"	"0.00135269024279511"	"22"	"0"	"0.0001498"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEDCFILDHGR"	"[R].sEDcFILDHGR.[D]"	"N-Term(TMT6plex); C4(Methylthio)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"3"	"3"	"0.9756"	"0.0000"	"1"	"1"	"1"	"522.91266"	"1566.72342"	"1566.72421"	"-0.51"	"-0.00026"	"16/94"	"16"	"94"	"3023322.65045166"	"HCD"	"MS2"	"3.847542"	"23.1"	"100.000"	"75.9057"	"25825"	"25825"	"25807"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.1"	""	"32.1"	""	"31.6"	""	"34.6"	"1.0"	"40.4"	"45.2"	""	"362"	"41"	"32.000"	"25.000"	"0.00134796487276984"	"16"	"0"	"2.398E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEDCFILDHGR"	"[R].sEDcFILDHGR.[D]"	"N-Term(TMT6plex); C4(Methylthio)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"522.91272"	"1566.72361"	"1566.72421"	"-0.39"	"-0.00020"	"10/94"	"10"	"94"	"841312.649291992"	"HCD"	"MS2"	"15.55703"	"13.0"	"100.000"	"75.4989"	"25670"	"25670"	"25650"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.7"	""	"16.4"	""	"15.8"	""	"24.6"	""	"25.0"	"26.0"	""	"363"	"32"	"32.000"	"25.000"	"0.0114782751024784"	"18"	"0"	"0.0004509"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNNQFASASLDR"	"[K].dNNQFASASLDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.88843"	"1566.76958"	"1566.77096"	"-0.88"	"-0.00069"	"4/128"	"4"	"128"	"248104.008117676"	"HCD"	"MS2"	"100"	"20.7"	"100.000"	"47.9099"	"14486"	"14486"	"14460"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.2"	""	"23.8"	""	"39.2"	""	"23.7"	""	"41.2"	"38.7"	""	"651"	"11"	"35.000"	"28.000"	"2.77684087112726"	"13"	"0.005119"	"0.058"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLmR.[V]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"783.89270"	"1566.77812"	"1566.78173"	"-2.30"	"-0.00180"	"6/96"	"6"	"96"	"275194.295349121"	"HCD"	"MS2"	"0"	"20.5"	"100.000"	"60.5944"	"19608"	"19608"	"19592"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.4"	""	"23.3"	""	"30.4"	""	"32.1"	""	"44.7"	"36.5"	""	"726"	"15"	"35.000"	"28.000"	"1.19098591400062"	"13"	"0.003717"	"0.03853"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDmVETQQLMR.[V]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"783.89374"	"1566.78020"	"1566.78173"	"-0.98"	"-0.00077"	"9/96"	"9"	"96"	"1091008.5848999"	"HCD"	"MS2"	"7.26188"	"55.9"	"100.000"	"53.1723"	"16620"	"16620"	"16595"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"72.3"	""	"61.5"	""	"64.0"	""	"78.0"	""	"125.0"	"130.9"	""	"743"	"41"	"35.000"	"28.000"	"0.00303360350959717"	"22"	"0"	"0.0002923"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLmR.[V]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.89386"	"1566.78044"	"1566.78173"	"-0.82"	"-0.00064"	"4/96"	"4"	"96"	"203965.422302246"	"HCD"	"MS2"	"0"	"16.9"	"100.000"	"57.8881"	"18552"	"18552"	"18527"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.1"	""	"27.4"	""	"15.2"	""	"24.6"	"1.3"	"33.7"	"38.2"	""	"746"	"6"	"35.000"	"28.000"	"10.179087129874"	"13"	"0.004022"	"0.04277"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLmR.[V]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"783.89423"	"1566.78118"	"1566.78173"	"-0.35"	"-0.00028"	"8/96"	"8"	"96"	"1495062.91485596"	"HCD"	"MS2"	"12.97953"	"64.4"	"100.000"	"53.4760"	"16744"	"16744"	"16722"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.6"	""	"74.9"	""	"73.2"	""	"86.7"	""	"128.1"	"145.4"	""	"747"	"42"	"35.000"	"28.000"	"0.00229240108929051"	"19"	"0"	"0.0005441"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDmVETQQLMR.[V]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"783.89435"	"1566.78142"	"1566.78173"	"-0.20"	"-0.00015"	"9/96"	"9"	"96"	"1259105.43951416"	"HCD"	"MS2"	"6.793089"	"61.9"	"100.000"	"52.9415"	"16537"	"16537"	"16513"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"80.1"	""	"73.8"	""	"77.3"	""	"83.3"	""	"141.1"	"133.8"	""	"747"	"34"	"35.000"	"28.000"	"0.0161916313077742"	"19"	"0"	"0.0006329"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLmR.[V]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"522.93201"	"1566.78147"	"1566.78173"	"-0.17"	"-0.00009"	"10/96"	"10"	"96"	"1870757.21862793"	"HCD"	"MS2"	"48.99946"	"37.2"	"100.000"	"53.3288"	"16684"	"16684"	"16658"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.8"	""	"50.7"	""	"44.1"	""	"61.7"	""	"75.3"	"78.4"	""	"745"	"32"	"35.000"	"28.000"	"0.0224453445812698"	"25"	"0"	"0.002226"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDmVETQQLMR.[V]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"783.89441"	"1566.78154"	"1566.78173"	"-0.12"	"-0.00009"	"9/96"	"9"	"96"	"478300.713623047"	"HCD"	"MS2"	"22.27536"	"26.6"	"100.000"	"52.2302"	"16247"	"16247"	"16220"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.7"	""	"27.4"	""	"36.3"	""	"41.5"	""	"58.1"	"53.8"	""	"737"	"47"	"35.000"	"28.000"	"0.000728513312381221"	"21"	"0"	"0.001448"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDmVETQQLMR.[V]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"783.89447"	"1566.78166"	"1566.78173"	"-0.04"	"-0.00003"	"9/96"	"9"	"96"	"547948.375183105"	"HCD"	"MS2"	"19.62588"	"29.6"	"100.000"	"52.5579"	"16369"	"16369"	"16345"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.6"	""	"42.1"	""	"31.1"	""	"38.0"	"0.7"	"59.2"	"70.4"	""	"737"	"44"	"35.000"	"28.000"	"0.00134721680709437"	"20"	"0"	"0.00188"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLmR.[V]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"783.89447"	"1566.78166"	"1566.78173"	"-0.04"	"-0.00003"	"9/96"	"9"	"96"	"1128168.73236084"	"HCD"	"MS2"	"12.57666"	"51.7"	"100.000"	"53.2428"	"16660"	"16660"	"16637"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.9"	""	"63.6"	""	"65.5"	""	"71.4"	""	"97.3"	"120.8"	""	"737"	"45"	"35.000"	"28.000"	"0.0012895479404995"	"19"	"0"	"0.002963"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLmR.[V]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"1"	"522.93225"	"1566.78220"	"1566.78173"	"0.30"	"0.00016"	"4/96"	"4"	"96"	"1065375.18383789"	"HCD"	"MS2"	"38.29153"	"27.9"	"100.000"	"52.9920"	"16558"	"16558"	"16529"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.0"	""	"41.0"	""	"34.2"	""	"42.9"	"1.8"	"50.5"	"54.2"	""	"739"	"18"	"35.000"	"28.000"	"0.600640265249804"	"24"	"0.003507"	"0.03646"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLTSQR"	"[K].aGEmTEVLTSQR.[Y]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"783.90228"	"1566.79729"	"1566.79949"	"-1.40"	"-0.00110"	"10/104"	"10"	"104"	"421387.003723145"	"HCD"	"MS2"	"0"	"19.1"	"100.000"	"39.8554"	"11202"	"11202"	"11181"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.7"	""	"25.1"	""	"24.3"	""	"33.5"	""	"45.5"	"34.1"	""	"805"	"51"	"36.000"	"29.000"	"0.000324164822582625"	""	"0"	"0.0005156"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLTSQR"	"[K].aGEmTEVLTSQR.[Y]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"783.90308"	"1566.79888"	"1566.79949"	"-0.39"	"-0.00031"	"10/104"	"10"	"104"	"640020.782226563"	"HCD"	"MS2"	"0"	"28.9"	"100.000"	"39.5294"	"11069"	"11069"	"11038"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.1"	""	"22.0"	""	"35.1"	""	"81.8"	""	"60.7"	"54.9"	""	"823"	"32"	"36.000"	"29.000"	"0.0235163458990473"	"24"	"0.0003538"	"0.006143"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLTSQR"	"[K].aGEmTEVLTSQR.[Y]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.5106"	"0.0000"	"1"	"1"	"1"	"783.90332"	"1566.79936"	"1566.79949"	"-0.08"	"-0.00006"	"9/104"	"9"	"104"	"729121.392333984"	"HCD"	"MS2"	"0"	"32.3"	"100.000"	"39.5857"	"11101"	"11101"	"11080"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.3"	""	"43.5"	""	"48.4"	""	"61.4"	"1.6"	"58.8"	"52.1"	""	"816"	"47"	"36.000"	"29.000"	"0.000852432821388449"	""	"0"	"0.0007971"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLTSQR"	"[K].aGEmTEVLTSQR.[Y]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"783.90399"	"1566.80071"	"1566.79949"	"0.78"	"0.00061"	"10/104"	"10"	"104"	"351508.192626953"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"39.2687"	"10972"	"10972"	"10946"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.1"	""	"18.2"	""	"21.8"	""	"48.3"	""	"34.8"	"35.8"	""	"831"	"48"	"36.000"	"29.000"	"0.000683236450995804"	""	"0"	"0.001998"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEEFNIEK"	"[K].aEEEFNIEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6PCU2"	"V-type proton ATPase subunit E 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1e1 PE=1 SV=1"	"Q6PCU2"	"V-type proton ATPase subunit E 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1e1 PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"783.92389"	"1566.84050"	"1566.84156"	"-0.67"	"-0.00053"	"10/82"	"10"	"82"	"156905.696899414"	"HCD"	"MS2"	"13.33785"	"17.0"	"100.000"	"70.4575"	"23615"	"23615"	"23589"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.1"	""	"16.0"	""	"20.3"	""	"31.1"	""	"27.7"	"47.4"	""	"890"	"27"	"36.000"	"29.000"	"0.0883812238224031"	"15"	"0.000936"	"0.01289"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEEFNIEK"	"[K].aEEEFNIEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6PCU2"	"V-type proton ATPase subunit E 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1e1 PE=1 SV=1"	"Q6PCU2"	"V-type proton ATPase subunit E 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1e1 PE=1 SV=1"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"783.92432"	"1566.84136"	"1566.84156"	"-0.13"	"-0.00010"	"7/82"	"7"	"82"	"415386.182983398"	"HCD"	"MS2"	"14.08791"	"39.3"	"100.000"	"70.0174"	"23450"	"23450"	"23421"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.2"	""	"38.3"	""	"46.1"	""	"66.3"	""	"87.3"	"86.4"	""	"880"	"49"	"36.000"	"29.000"	"0.000599035660285018"	"24"	"0"	"0.0001051"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEEFNIEK"	"[K].aEEEFNIEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6PCU2"	"V-type proton ATPase subunit E 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1e1 PE=1 SV=1"	"Q6PCU2"	"V-type proton ATPase subunit E 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1e1 PE=1 SV=1"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"783.92456"	"1566.84184"	"1566.84156"	"0.18"	"0.00014"	"8/82"	"8"	"82"	"406271.868896484"	"HCD"	"MS2"	"13.77683"	"35.8"	"100.000"	"70.1482"	"23489"	"23489"	"23461"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.5"	""	"32.1"	""	"45.3"	""	"65.4"	""	"78.1"	"80.4"	""	"890"	"43"	"36.000"	"29.000"	"0.00221493002815627"	"28"	"0"	"0.0005274"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGVGAPGSPSTPPTR"	"[R].gGVGAPGSPSTPPTR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M821"	"Protein phosphatase 1H OS=Rattus norvegicus OX=10116 GN=Ppm1h PE=1 SV=2"	"Q5M821"	"Protein phosphatase 1H OS=Rattus norvegicus OX=10116 GN=Ppm1h PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.92474"	"1566.84221"	"1566.84374"	"-0.97"	"-0.00076"	"9/124"	"9"	"124"	"269368.004516602"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"35.2626"	"9347"	"9347"	"9318"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.2"	""	"14.0"	""	"14.0"	""	"19.6"	""	"24.0"	"25.9"	""	"886"	"47"	"36.000"	"29.000"	"0.000908664845219725"	"16"	"0"	"0.0002051"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGVGAPGSPSTPPTR"	"[R].gGVGAPGSPSTPPTR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M821"	"Protein phosphatase 1H OS=Rattus norvegicus OX=10116 GN=Ppm1h PE=1 SV=2"	"Q5M821"	"Protein phosphatase 1H OS=Rattus norvegicus OX=10116 GN=Ppm1h PE=1 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"783.92621"	"1566.84514"	"1566.84374"	"0.90"	"0.00070"	"7/124"	"7"	"124"	"208994.660583496"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"35.3469"	"9376"	"9376"	"9346"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.6"	""	"8.6"	""	"9.6"	""	"22.5"	""	"19.5"	"20.4"	""	"889"	"22"	"36.000"	"29.000"	"0.294355235895433"	"15"	"0"	"0.001339"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISQEQMNEFR"	"[K].gISQEQMNEFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"784.39001"	"1567.77275"	"1567.77361"	"-0.54"	"-0.00043"	"15/106"	"15"	"106"	"1430568.42633057"	"HCD"	"MS2"	"13.68517"	"96.2"	"100.000"	"59.5020"	"19196"	"19196"	"19174"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"159.7"	""	"103.5"	""	"128.8"	""	"110.7"	""	"204.5"	"207.0"	""	"728"	"52"	"35.000"	"28.000"	"0.000244400102465047"	"18"	"0"	"5.595E-06"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISQEQMNEFR"	"[K].gISQEQMNEFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"784.39044"	"1567.77361"	"1567.77361"	"0.00"	"0.00000"	"9/106"	"9"	"106"	"1582455.08618164"	"HCD"	"MS2"	"21.15408"	"108.5"	"100.000"	"59.2237"	"19097"	"19097"	"19085"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"165.9"	""	"135.0"	""	"130.5"	""	"136.2"	""	"241.7"	"222.1"	""	"719"	"57"	"35.000"	"28.000"	"8.01122436162674E-05"	"16"	"0"	"1.034E-05"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQDVLPYDDAR"	"[R].fQDVLPYDDAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62728"	"Tyrosine-protein phosphatase non-receptor type 21 OS=Rattus norvegicus OX=10116 GN=Ptpn21 PE=1 SV=1"	"Q62728"	"Tyrosine-protein phosphatase non-receptor type 21 OS=Rattus norvegicus OX=10116 GN=Ptpn21 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"784.40167"	"1567.79607"	"1567.79539"	"0.43"	"0.00034"	"6/110"	"6"	"110"	"81467.2996826172"	"HCD"	"MS2"	"19.93052"	"5.4"	"100.000"	"88.7252"	"30925"	"30925"	"30912"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.4"	""	"8.6"	""	"6.4"	""	"9.2"	""	"8.9"	"10.7"	""	"833"	"14"	"36.000"	"29.000"	"1.71638616704038"	"20"	"0.005617"	"0.06326"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQDVLPYDDAR"	"[R].fQDVLPYDDAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62728"	"Tyrosine-protein phosphatase non-receptor type 21 OS=Rattus norvegicus OX=10116 GN=Ptpn21 PE=1 SV=1"	"Q62728"	"Tyrosine-protein phosphatase non-receptor type 21 OS=Rattus norvegicus OX=10116 GN=Ptpn21 PE=1 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"3"	"784.40210"	"1567.79692"	"1567.79539"	"0.98"	"0.00077"	"5/110"	"5"	"110"	"76096.770690918"	"HCD"	"MS2"	"16.31613"	"4.9"	"100.000"	"88.7416"	"30928"	"30928"	"30914"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.3"	""	"5.6"	""	"7.8"	""	"8.7"	""	"9.6"	"10.0"	""	"855"	"10"	"36.000"	"29.000"	"3.91684259527155"	"21"	"0.004867"	"0.05249"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDGENYAIK"	"[K].aEDGENYAIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"784.42157"	"1567.83586"	"1567.83681"	"-0.60"	"-0.00047"	"9/86"	"9"	"86"	"389760.565185547"	"HCD"	"MS2"	"21.24819"	"34.5"	"100.000"	"52.3115"	"16269"	"16269"	"16240"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.7"	""	"40.1"	""	"36.4"	""	"45.5"	""	"75.3"	"78.7"	""	"889"	"48"	"36.000"	"29.000"	"0.000682137248854286"	"25"	"0"	"0.0002591"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDGENYAIK"	"[K].aEDGENYAIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"784.42218"	"1567.83708"	"1567.83681"	"0.18"	"0.00014"	"9/86"	"9"	"86"	"398098.428161621"	"HCD"	"MS2"	"48.15983"	"36.0"	"100.000"	"51.9657"	"16139"	"16139"	"16111"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.1"	""	"42.7"	""	"47.7"	""	"48.9"	""	"69.0"	"85.2"	""	"889"	"45"	"36.000"	"29.000"	"0.00153063544224304"	"19"	"0"	"4.928E-05"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDGQASLYK"	"[K].vEDGQASLYk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"784.43945"	"1567.87163"	"1567.87319"	"-1.00"	"-0.00078"	"9/92"	"9"	"92"	"1830421.45672607"	"HCD"	"MS2"	"41.02785"	"149.2"	"100.000"	"58.5035"	"18803"	"18803"	"18783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"235.3"	""	"196.7"	""	"193.7"	""	"251.1"	""	"264.5"	"272.3"	""	"907"	"64"	"36.000"	"29.000"	"1.70050256518327E-05"	"22"	"0"	"2.754E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDGQASLYK"	"[K].vEDGQASLYk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"523.29547"	"1567.87186"	"1567.87319"	"-0.85"	"-0.00044"	"8/92"	"8"	"92"	"2580532.26239014"	"HCD"	"MS2"	"14.34607"	"73.2"	"100.000"	"58.8413"	"18926"	"18926"	"18904"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.3"	"1.7"	"84.4"	""	"94.2"	""	"125.1"	""	"146.8"	"143.1"	""	"918"	"55"	"36.000"	"29.000"	"0.000148871884363351"	"21"	"0"	"0.0001096"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDGQASLYK"	"[K].vEDGQASLYk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.9400"	"0.0000"	"1"	"1"	"1"	"784.43982"	"1567.87236"	"1567.87319"	"-0.53"	"-0.00042"	"8/92"	"8"	"92"	"573058.19732666"	"HCD"	"MS2"	"16.38329"	"53.0"	"100.000"	"59.0047"	"18993"	"18993"	"18968"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.7"	""	"68.6"	""	"70.6"	""	"82.4"	"0.6"	"103.4"	"101.0"	""	"918"	"50"	"36.000"	"29.000"	"0.000470774234149395"	"18"	"0"	"0.0005574"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDGQASLYK"	"[K].vEDGQASLYk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"784.44025"	"1567.87322"	"1567.87319"	"0.01"	"0.00001"	"16/92"	"16"	"92"	"435766.097412109"	"HCD"	"MS2"	"21.81628"	"37.2"	"100.000"	"58.8278"	"18936"	"18936"	"18911"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.8"	""	"45.4"	""	"46.0"	""	"60.4"	"2.2"	"75.8"	"72.3"	""	"913"	"50"	"36.000"	"29.000"	"0.000415375408956623"	"16"	"0"	"2.205E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDGQASLYK"	"[K].vEDGQASLYk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8906"	"0.0000"	"1"	"1"	"1"	"784.44037"	"1567.87346"	"1567.87319"	"0.17"	"0.00013"	"9/92"	"9"	"92"	"1412423.08508301"	"HCD"	"MS2"	"46.471"	"111.9"	"100.000"	"58.6777"	"18859"	"18859"	"18840"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"179.9"	""	"142.9"	""	"142.1"	""	"196.8"	""	"203.5"	"196.0"	""	"913"	"64"	"36.000"	"29.000"	"1.78008516917842E-05"	"23"	"0"	"7.634E-06"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDGQASLYK"	"[K].vEDGQASLYk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"0.9455"	"0.0000"	"1"	"1"	"1"	"523.29602"	"1567.87351"	"1567.87319"	"0.20"	"0.00010"	"8/92"	"8"	"92"	"2901951.64697266"	"HCD"	"MS2"	"12.65163"	"80.9"	"100.000"	"58.6209"	"18851"	"18851"	"18831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"115.4"	""	"85.8"	""	"102.6"	""	"130.9"	"2.7"	"171.3"	"158.9"	""	"913"	"55"	"36.000"	"29.000"	"0.000144690754687935"	"19"	"0"	"3.628E-05"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFEEPEDPSSR"	"[K].fFEEPEDPSSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P56932"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2d PE=2 SV=1"	"P56932"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2d PE=2 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"784.87427"	"1568.74126"	"1568.74302"	"-1.12"	"-0.00088"	"9/94"	"9"	"94"	"164816.807739258"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"70.7763"	"23759"	"23759"	"23732"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.4"	""	"9.9"	""	"10.8"	""	"14.6"	""	"17.8"	"15.7"	""	"474"	"28"	"33.000"	"26.000"	"0.0335543125849828"	"19"	"0.000936"	"0.01229"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSDTAAYQSVR"	"[K].eLSDTAAYQSVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P82450"	"Sialate O-acetylesterase OS=Rattus norvegicus OX=10116 GN=Siae PE=1 SV=2"	"P82450"	"Sialate O-acetylesterase OS=Rattus norvegicus OX=10116 GN=Siae PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"784.90961"	"1568.81194"	"1568.81177"	"0.11"	"0.00009"	"4/112"	"4"	"112"	"166944.017089844"	"HCD"	"MS2"	"0"	"12.3"	"100.000"	"54.0599"	"16994"	"16994"	"16971"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.4"	""	"11.8"	""	"12.9"	""	"26.6"	""	"25.8"	"26.5"	""	"817"	"6"	"36.000"	"29.000"	"10.5485328787423"	"13"	"0.006505"	"0.07365"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEFTIETEGK"	"[K].gEFTIETEGk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"784.92944"	"1568.85161"	"1568.85721"	"-3.57"	"-0.00280"	"8/84"	"8"	"84"	"667783.847229004"	"HCD"	"MS2"	"39.98622"	"55.6"	"100.000"	"68.3341"	"22749"	"22749"	"22726"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"88.0"	""	"67.6"	""	"81.4"	""	"90.5"	""	"106.2"	"96.1"	""	"843"	"44"	"36.000"	"29.000"	"0.00163605379265058"	"26"	"0"	"8.783E-05"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEFTIETEGK"	"[K].gEFTIETEGk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"3"	"3"	"0.4167"	"0.0000"	"1"	"1"	"1"	"523.62268"	"1568.85349"	"1568.85721"	"-2.37"	"-0.00124"	"8/84"	"8"	"84"	"1084346.27099609"	"HCD"	"MS2"	"77.06618"	"33.7"	"100.000"	"68.2474"	"22728"	"22728"	"22703"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.5"	""	"43.6"	""	"45.2"	""	"62.5"	""	"63.2"	"69.2"	""	"864"	"24"	"36.000"	"29.000"	"0.159765773665075"	"28"	"0.001374"	"0.01672"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEFTIETEGK"	"[K].gEFTIETEGk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"784.93091"	"1568.85454"	"1568.85721"	"-1.70"	"-0.00133"	"16/84"	"16"	"84"	"777833.533203125"	"HCD"	"MS2"	"12.43894"	"63.4"	"100.000"	"68.2362"	"22723"	"22723"	"22703"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"88.8"	""	"84.9"	""	"87.7"	""	"101.7"	""	"115.4"	"122.6"	""	"850"	"58"	"36.000"	"29.000"	"7.06950376407323E-05"	"24"	"0"	"6.848E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEFTIETEGK"	"[K].gEFTIETEGk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"784.93109"	"1568.85491"	"1568.85721"	"-1.47"	"-0.00115"	"10/84"	"10"	"84"	"212772.213439941"	"HCD"	"MS2"	"11.1999"	"20.4"	"100.000"	"68.6500"	"22878"	"22878"	"22853"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.5"	""	"30.9"	""	"30.1"	""	"23.2"	""	"41.7"	"39.5"	""	"850"	"25"	"36.000"	"29.000"	"0.134396800557156"	"23"	"0.003507"	"0.03573"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVISVEEPPQR"	"[K].vSVISVEEPPQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.7170"	"0.0000"	"1"	"1"	"1"	"784.94482"	"1568.88237"	"1568.88454"	"-1.38"	"-0.00108"	"7/102"	"7"	"102"	"483010.05670166"	"HCD"	"MS2"	"15.19938"	"26.6"	"100.000"	"68.0051"	"22629"	"22629"	"22610"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.8"	""	"37.6"	""	"38.1"	""	"35.5"	""	"48.2"	"50.9"	""	"836"	"53"	"36.000"	"29.000"	"0.000219875217351315"	""	"0"	"4.026E-05"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVISVEEPPQR"	"[K].vSVISVEEPPQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"784.94501"	"1568.88274"	"1568.88454"	"-1.15"	"-0.00090"	"11/102"	"11"	"102"	"1107284.64642334"	"HCD"	"MS2"	"7.077271"	"41.3"	"100.000"	"67.7193"	"22514"	"22514"	"22502"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.1"	""	"52.8"	""	"63.8"	""	"64.7"	"0.6"	"57.1"	"72.2"	""	"835"	"52"	"36.000"	"29.000"	"0.000273940648681463"	"28"	"0"	"7.956E-06"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVISVEEPPQR"	"[K].vSVISVEEPPQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"523.63251"	"1568.88297"	"1568.88454"	"-1.00"	"-0.00052"	"14/102"	"14"	"102"	"2876143.08123779"	"HCD"	"MS2"	"28.84617"	"30.5"	"100.000"	"67.9375"	"22587"	"22587"	"22569"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.7"	""	"46.6"	""	"49.2"	""	"53.2"	"0.1"	"49.3"	"52.9"	""	"835"	"57"	"36.000"	"29.000"	"8.36867071424956E-05"	""	"0"	"3.397E-05"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVISVEEPPQR"	"[K].vSVISVEEPPQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"523.63257"	"1568.88315"	"1568.88454"	"-0.88"	"-0.00046"	"15/102"	"15"	"102"	"2210062.50280762"	"HCD"	"MS2"	"26.25419"	"22.3"	"100.000"	"67.6470"	"22469"	"22469"	"22446"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.7"	""	"31.7"	""	"30.3"	""	"34.0"	""	"43.2"	"42.4"	""	"854"	"55"	"36.000"	"29.000"	"0.000132870287594427"	""	"0"	"9.482E-06"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVISVEEPPQR"	"[K].vSVISVEEPPQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"3"	"3"	"0.5926"	"0.0000"	"1"	"1"	"1"	"523.63257"	"1568.88315"	"1568.88454"	"-0.88"	"-0.00046"	"13/102"	"13"	"102"	"2238960.20611572"	"HCD"	"MS2"	"20.33952"	"21.2"	"100.000"	"67.5117"	"22429"	"22429"	"22408"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.8"	""	"29.8"	""	"27.0"	""	"40.3"	""	"34.9"	"40.5"	""	"854"	"54"	"36.000"	"29.000"	"0.000154677760323931"	""	"0"	"1.643E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVISVEEPPQR"	"[K].vSVISVEEPPQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"3"	"3"	"0.7358"	"0.0000"	"1"	"1"	"1"	"523.63257"	"1568.88315"	"1568.88454"	"-0.88"	"-0.00046"	"15/102"	"15"	"102"	"2731501.98822021"	"HCD"	"MS2"	"30.38473"	"28.3"	"100.000"	"67.8068"	"22548"	"22548"	"22537"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.0"	""	"46.4"	""	"38.0"	""	"44.9"	""	"52.0"	"52.1"	""	"854"	"53"	"36.000"	"29.000"	"0.000200183314176028"	""	"0"	"8.373E-06"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVISVEEPPQR"	"[K].vSVISVEEPPQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"784.94537"	"1568.88347"	"1568.88454"	"-0.68"	"-0.00053"	"8/102"	"8"	"102"	"254871.791625977"	"HCD"	"MS2"	"31.43244"	"12.9"	"100.000"	"67.5038"	"22411"	"22411"	"22385"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.1"	""	"16.3"	""	"15.3"	""	"23.4"	""	"20.5"	"25.8"	""	"854"	"42"	"36.000"	"29.000"	"0.00245712853242966"	""	"0"	"9.241E-05"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVISVEEPPQR"	"[K].vSVISVEEPPQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.7593"	"0.0000"	"1"	"1"	"1"	"784.94556"	"1568.88384"	"1568.88454"	"-0.45"	"-0.00035"	"7/102"	"7"	"102"	"989621.545959473"	"HCD"	"MS2"	"1.879444"	"38.4"	"100.000"	"67.7879"	"22527"	"22527"	"22510"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"70.8"	""	"59.0"	""	"55.9"	""	"53.6"	""	"60.5"	"65.2"	""	"840"	"54"	"36.000"	"29.000"	"0.000153196657708755"	"29"	"0"	"3.368E-06"	"1.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVISVEEPPQR"	"[K].vSVISVEEPPQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"784.94568"	"1568.88408"	"1568.88454"	"-0.29"	"-0.00023"	"7/102"	"7"	"102"	"538244.733825684"	"HCD"	"MS2"	"19.2158"	"23.2"	"100.000"	"68.0920"	"22650"	"22650"	"22631"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.5"	""	"35.2"	""	"28.6"	""	"34.1"	""	"39.3"	"43.5"	""	"840"	"51"	"36.000"	"29.000"	"0.000357477976044998"	"29"	"0"	"7.697E-05"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVISVEEPPQR"	"[K].vSVISVEEPPQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"784.94617"	"1568.88506"	"1568.88454"	"0.33"	"0.00026"	"7/102"	"7"	"102"	"379071.358764648"	"HCD"	"MS2"	"22.43708"	"18.2"	"100.000"	"67.4124"	"22389"	"22389"	"22363"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.3"	""	"22.1"	""	"22.8"	""	"27.1"	""	"35.5"	"29.4"	""	"856"	"51"	"36.000"	"29.000"	"0.00035435924606888"	"29"	"0"	"5.992E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLVDVVDPK"	"[K].ePLVDVVDPk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"3"	"3"	"0.7429"	"0.0000"	"1"	"1"	"1"	"523.64764"	"1568.92838"	"1568.92998"	"-1.02"	"-0.00053"	"10/86"	"10"	"86"	"786445.365356445"	"HCD"	"MS2"	"19.28096"	"17.5"	"100.000"	"87.0371"	"30269"	"30269"	"30260"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.0"	""	"17.9"	""	"21.9"	""	"32.3"	""	"33.9"	"36.3"	""	"582"	"35"	"34.000"	"27.000"	"0.0088083180757748"	"24"	"0"	"0.0006348"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLVDVVDPK"	"[K].ePLVDVVDPk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"784.96820"	"1568.92912"	"1568.92998"	"-0.55"	"-0.00043"	"7/86"	"7"	"86"	"189126.288330078"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"87.2962"	"30375"	"30375"	"30360"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.1"	""	"11.3"	""	"9.8"	""	"23.3"	""	"17.4"	"22.6"	""	"583"	"52"	"34.000"	"27.000"	"0.000195271363644917"	"20"	"0"	"0.0001021"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLVDVVDPK"	"[K].ePLVDVVDPk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8909"	"0.0000"	"1"	"1"	"1"	"784.96844"	"1568.92961"	"1568.92998"	"-0.23"	"-0.00018"	"7/86"	"7"	"86"	"238865.010742188"	"HCD"	"MS2"	"6.009923"	"13.0"	"100.000"	"87.2572"	"30353"	"30353"	"30339"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.7"	""	"11.3"	""	"13.3"	""	"23.7"	""	"32.7"	"29.7"	""	"581"	"55"	"34.000"	"27.000"	"9.95740419917439E-05"	"22"	"0"	"0.0002849"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLVDVVDPK"	"[K].ePLVDVVDPk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"3"	"3"	"0.6500"	"0.0000"	"1"	"1"	"1"	"523.64807"	"1568.92966"	"1568.92998"	"-0.20"	"-0.00011"	"11/86"	"11"	"86"	"791951.332336426"	"HCD"	"MS2"	"19.98616"	"17.8"	"100.000"	"87.0459"	"30277"	"30277"	"30257"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.9"	""	"16.8"	""	"19.2"	""	"33.5"	"0.6"	"37.2"	"39.4"	""	"574"	"40"	"34.000"	"27.000"	"0.00314689242293094"	""	"0"	"0.0002264"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLVDVVDPK"	"[K].ePLVDVVDPk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8909"	"0.0000"	"1"	"1"	"1"	"784.96857"	"1568.92986"	"1568.92998"	"-0.08"	"-0.00006"	"7/86"	"7"	"86"	"250817.931091309"	"HCD"	"MS2"	"0"	"14.1"	"100.000"	"87.0089"	"30262"	"30262"	"30241"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.4"	""	"13.8"	""	"15.0"	""	"27.4"	""	"33.8"	"26.5"	""	"574"	"55"	"34.000"	"27.000"	"9.95134760798766E-05"	"22"	"0"	"0.0002265"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLVDVVDPK"	"[K].ePLVDVVDPk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"523.64825"	"1568.93021"	"1568.92998"	"0.15"	"0.00008"	"10/86"	"10"	"86"	"459166.605834961"	"HCD"	"MS2"	"18.6451"	"11.6"	"100.000"	"87.3402"	"30392"	"30392"	"30377"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.0"	""	"9.3"	""	"16.8"	""	"19.2"	""	"26.4"	"26.8"	""	"603"	"37"	"34.000"	"27.000"	"0.00632830374912492"	"23"	"0"	"0.001472"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLVDVVDPK"	"[K].ePLVDVVDPk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"784.96906"	"1568.93083"	"1568.92998"	"0.54"	"0.00043"	"8/86"	"8"	"86"	"227877.135742188"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"86.9699"	"30242"	"30242"	"30222"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.6"	""	"12.0"	""	"14.9"	""	"25.3"	"1.6"	"26.2"	"28.5"	""	"605"	"41"	"34.000"	"27.000"	"0.00247585598410774"	"19"	"0"	"0.0002148"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLVDVVDPK"	"[K].ePLVDVVDPk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"523.64880"	"1568.93186"	"1568.92998"	"1.20"	"0.00063"	"9/86"	"9"	"86"	"438707.100585938"	"HCD"	"MS2"	"20.7887"	"11.4"	"100.000"	"87.3430"	"30386"	"30386"	"30374"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.1"	""	"11.9"	""	"13.8"	""	"17.1"	""	"22.9"	"29.9"	""	"571"	"32"	"34.000"	"27.000"	"0.0191252055988419"	"17"	"0.0001301"	"0.004139"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lNGYSDAGDSWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.37775"	"1569.74822"	"1569.74950"	"-0.82"	"-0.00064"	"6/118"	"6"	"118"	"253697.997680664"	"HCD"	"MS2"	"27.45742"	"18.6"	"100.000"	"66.3846"	"21969"	"21969"	"21949"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.3"	""	"16.7"	""	"24.2"	""	"32.3"	""	"38.6"	"41.2"	""	"501"	"12"	"33.000"	"26.000"	"1.51637889125856"	"13"	"0.001374"	"0.01688"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lNGYSDAGDSWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.37805"	"1569.74883"	"1569.74950"	"-0.43"	"-0.00034"	"7/118"	"7"	"118"	"287900.992980957"	"HCD"	"MS2"	"20.73071"	"22.4"	"100.000"	"66.4480"	"21980"	"21980"	"21957"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.3"	""	"25.8"	""	"25.6"	""	"35.3"	""	"43.2"	"47.6"	""	"508"	"23"	"34.000"	"27.000"	"0.122414740596782"	"14"	"0.0002479"	"0.005683"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lNGYSDAGDSWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.9714"	"0.0000"	"1"	"1"	"1"	"785.37811"	"1569.74895"	"1569.74950"	"-0.35"	"-0.00028"	"11/118"	"11"	"118"	"554312.572875977"	"HCD"	"MS2"	"12.04668"	"35.2"	"100.000"	"66.0568"	"21836"	"21836"	"21812"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.8"	""	"44.1"	""	"39.5"	""	"58.1"	""	"65.6"	"79.7"	""	"507"	"70"	"34.000"	"27.000"	"2.73512994085261E-06"	"18"	"0"	"6.151E-06"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lNGYSDAGDSWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"785.37842"	"1569.74956"	"1569.74950"	"0.04"	"0.00003"	"9/118"	"9"	"118"	"551391.647827148"	"HCD"	"MS2"	"17.77642"	"34.2"	"100.000"	"66.1483"	"21858"	"21858"	"21832"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.7"	""	"43.8"	""	"37.0"	""	"60.0"	"1.8"	"71.7"	"69.7"	""	"505"	"56"	"34.000"	"27.000"	"6.31337203828348E-05"	"18"	"0"	"4.264E-06"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGPGTGTGTAYDR"	"[R].sTGPGTGTGTAYDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63400"	"Claudin-3 OS=Rattus norvegicus OX=10116 GN=Cldn3 PE=1 SV=2"	"Q63400"	"Claudin-3 OS=Rattus norvegicus OX=10116 GN=Cldn3 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"785.38837"	"1569.76946"	"1569.77063"	"-0.75"	"-0.00059"	"6/128"	"6"	"128"	"355147.477905273"	"HCD"	"MS2"	"0"	"23.4"	"100.000"	"28.3388"	"6529"	"6529"	"6507"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.5"	""	"34.4"	""	"31.6"	""	"47.5"	""	"40.5"	"40.7"	""	"596"	"15"	"34.000"	"27.000"	"0.912465103239821"	"23"	"0.003449"	"0.03351"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGPGTGTGTAYDR"	"[R].sTGPGTGTGTAYDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63400"	"Claudin-3 OS=Rattus norvegicus OX=10116 GN=Cldn3 PE=1 SV=2"	"Q63400"	"Claudin-3 OS=Rattus norvegicus OX=10116 GN=Cldn3 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"785.38928"	"1569.77129"	"1569.77063"	"0.42"	"0.00033"	"6/128"	"6"	"128"	"389738.219299316"	"HCD"	"MS2"	"26.71938"	"26.5"	"100.000"	"28.3110"	"6532"	"6532"	"6505"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.3"	""	"41.0"	""	"34.2"	""	"47.9"	""	"50.3"	"49.5"	""	"621"	"13"	"34.000"	"27.000"	"1.51377596177102"	"17"	"0.001635"	"0.01987"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVEDGEVFDFR"	"[K].qVEDGEVFDFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"785.39001"	"1569.77275"	"1569.77465"	"-1.21"	"-0.00095"	"8/112"	"8"	"112"	"199882.372192383"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"84.0819"	"29109"	"29109"	"29093"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.9"	""	"16.0"	""	"14.9"	""	"15.5"	""	"27.2"	"21.1"	""	"627"	"50"	"34.000"	"27.000"	"0.000303555107937901"	"20"	"0"	"0.0003501"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVEDGEVFDFR"	"[K].qVEDGEVFDFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.39026"	"1569.77324"	"1569.77465"	"-0.90"	"-0.00071"	"8/112"	"8"	"112"	"191229.972961426"	"HCD"	"MS2"	"0"	"10.6"	"100.000"	"84.0795"	"29107"	"29107"	"29088"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.2"	""	"13.3"	""	"16.0"	""	"17.7"	""	"18.3"	"20.1"	""	"627"	"47"	"34.000"	"27.000"	"0.000692209483801424"	"16"	"0"	"0.000585"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVEDGEVFDFR"	"[K].qVEDGEVFDFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.9273"	"0.0000"	"1"	"1"	"1"	"785.39075"	"1569.77422"	"1569.77465"	"-0.28"	"-0.00022"	"8/112"	"8"	"112"	"207060.536682129"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"83.7748"	"28987"	"28987"	"28975"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.7"	""	"16.1"	""	"15.8"	""	"25.4"	""	"24.8"	"22.4"	""	"634"	"55"	"35.000"	"28.000"	"0.000111701566120469"	"20"	"0"	"0.0001281"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVEDGEVFDFR"	"[K].qVEDGEVFDFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"785.39099"	"1569.77471"	"1569.77465"	"0.03"	"0.00003"	"7/112"	"7"	"112"	"207223.669677734"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"83.7721"	"28984"	"28984"	"28967"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.1"	""	"12.6"	""	"16.2"	""	"20.1"	""	"21.8"	"21.8"	""	"629"	"40"	"34.000"	"27.000"	"0.00291487979452806"	"16"	"0.0001301"	"0.004151"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lnGYSDAGDSWR.[S]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.86969"	"1570.73210"	"1570.73352"	"-0.90"	"-0.00071"	"10/118"	"10"	"118"	"482571.38269043"	"HCD"	"MS2"	"0"	"28.0"	"100.000"	"71.9479"	"24222"	"24222"	"24206"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.3"	""	"27.0"	""	"39.7"	""	"45.7"	"0.8"	"57.4"	"64.4"	""	"417"	"50"	"33.000"	"26.000"	"0.000205166315551196"	"16"	"0"	"8.245E-06"	"0.921"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lnGYSDAGDSWR.[S]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"785.86987"	"1570.73247"	"1570.73352"	"-0.67"	"-0.00052"	"10/118"	"10"	"118"	"807928.078918457"	"HCD"	"MS2"	"0"	"38.9"	"100.000"	"71.2293"	"23944"	"23944"	"23921"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.0"	""	"40.8"	""	"37.7"	""	"73.7"	""	"89.8"	"83.6"	""	"418"	"64"	"33.000"	"26.000"	"8.73265466291439E-06"	"20"	"0"	"6.605E-06"	"0.942"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lnGYSDAGDSWR.[S]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.86993"	"1570.73259"	"1570.73352"	"-0.59"	"-0.00046"	"11/118"	"11"	"118"	"778911.79083252"	"HCD"	"MS2"	"0"	"42.7"	"100.000"	"71.7829"	"24169"	"24169"	"24157"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.5"	""	"47.6"	""	"47.3"	""	"68.8"	""	"94.5"	"100.6"	""	"418"	"57"	"33.000"	"26.000"	"4.41719209325859E-05"	"16"	"0"	"9.876E-07"	"1.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lnGYSDAGDSWR.[S]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.9275"	"0.0000"	"1"	"1"	"1"	"785.87000"	"1570.73271"	"1570.73352"	"-0.51"	"-0.00040"	"11/118"	"11"	"118"	"1505578.41931152"	"HCD"	"MS2"	"0"	"73.1"	"100.000"	"71.5109"	"24059"	"24059"	"24042"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.2"	""	"74.2"	""	"75.2"	""	"122.9"	"2.1"	"167.5"	"166.6"	""	"418"	"69"	"33.000"	"26.000"	"2.60703154476774E-06"	"21"	"0"	"1.658E-07"	"1.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lnGYSDAGDSWR.[S]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"785.87030"	"1570.73332"	"1570.73352"	"-0.12"	"-0.00010"	"10/118"	"10"	"118"	"945970.250488281"	"HCD"	"MS2"	"0"	"45.1"	"100.000"	"71.3765"	"23990"	"23990"	"23971"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.3"	""	"41.7"	""	"41.8"	""	"73.6"	""	"104.4"	"111.8"	""	"421"	"54"	"33.000"	"26.000"	"8.65470162925019E-05"	"20"	"0"	"3.255E-05"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lnGYSDAGDSWR.[S]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.9221"	"0.0000"	"1"	"1"	"1"	"785.87048"	"1570.73369"	"1570.73352"	"0.11"	"0.00009"	"10/118"	"10"	"118"	"1318113.62036133"	"HCD"	"MS2"	"0"	"64.9"	"100.000"	"71.6644"	"24107"	"24107"	"24088"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.1"	""	"63.4"	""	"66.3"	""	"106.3"	"0.5"	"143.3"	"160.1"	""	"421"	"77"	"33.000"	"26.000"	"4.01099481131263E-07"	"23"	"0"	"2.252E-07"	"1.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPDDAVETLAR"	"[K].gVVPDDAVETLAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"785.93536"	"1570.86345"	"1570.86380"	"-0.22"	"-0.00018"	"12/106"	"12"	"106"	"1151660.01965332"	"HCD"	"MS2"	"0"	"46.7"	"100.000"	"79.7883"	"27399"	"27399"	"27382"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.6"	""	"41.4"	""	"54.0"	""	"104.6"	""	"103.8"	"82.9"	""	"894"	"64"	"36.000"	"29.000"	"1.69553798283236E-05"	"26"	"0"	"1.084E-05"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPDDAVETLAR"	"[K].gVVPDDAVETLAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"785.93542"	"1570.86357"	"1570.86380"	"-0.15"	"-0.00011"	"10/106"	"10"	"106"	"1191426.8001709"	"HCD"	"MS2"	"0"	"46.1"	"100.000"	"79.7441"	"27376"	"27376"	"27358"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.0"	"1.9"	"51.4"	""	"48.0"	""	"89.5"	"0.3"	"103.7"	"93.1"	""	"889"	"77"	"36.000"	"29.000"	"7.99598121774745E-07"	"29"	"0"	"1.243E-06"	"1.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPDDAVETLAR"	"[K].gVVPDDAVETLAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"785.93665"	"1570.86601"	"1570.86380"	"1.41"	"0.00111"	"11/106"	"11"	"106"	"177969.8671875"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"79.4878"	"27279"	"27279"	"27249"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.1"	""	"9.2"	""	"11.8"	""	"22.8"	""	"16.9"	"15.9"	""	"883"	"30"	"36.000"	"29.000"	"0.046337298225"	"19"	"0.0008629"	"0.009801"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPDDAVETLAR"	"[K].gVVPDDAVETLAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"785.93732"	"1570.86736"	"1570.86380"	"2.26"	"0.00178"	"10/106"	"10"	"106"	"147467.045288086"	"HCD"	"MS2"	"28.31983"	"7.0"	"100.000"	"79.4463"	"27257"	"27257"	"27240"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.6"	""	"7.2"	""	"10.4"	""	"14.9"	""	"13.4"	"13.6"	""	"881"	"34"	"36.000"	"29.000"	"0.0176581789114827"	"18"	"0.0002479"	"0.005689"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPGQVTEAVK"	"[K].sPPGQVTEAVk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.96381"	"1570.92034"	"1570.92048"	"-0.09"	"-0.00007"	"9/106"	"9"	"106"	"384764.910339355"	"HCD"	"MS2"	"18.38324"	"24.5"	"100.000"	"50.1139"	"15373"	"15373"	"15342"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.8"	""	"34.2"	""	"31.7"	""	"38.6"	"1.6"	"37.9"	"47.8"	""	"711"	"57"	"35.000"	"28.000"	"7.22502917387826E-05"	"16"	"0"	"0.003611"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPGQVTEAVK"	"[K].sPPGQVTEAVk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8429"	"0.0000"	"1"	"1"	"1"	"785.96405"	"1570.92082"	"1570.92048"	"0.22"	"0.00017"	"10/106"	"10"	"106"	"526778.854248047"	"HCD"	"MS2"	"5.524282"	"32.1"	"100.000"	"50.0028"	"15339"	"15339"	"15318"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.1"	""	"42.2"	""	"42.0"	""	"48.7"	""	"55.8"	"69.7"	""	"725"	"70"	"35.000"	"28.000"	"3.2382323785332E-06"	"28"	"0"	"0.0002716"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPGQVTEAVK"	"[K].sPPGQVTEAVk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.9836"	"0.0000"	"1"	"1"	"1"	"785.96484"	"1570.92241"	"1570.92048"	"1.23"	"0.00097"	"8/106"	"8"	"106"	"327509.743652344"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"49.6731"	"15205"	"15205"	"15174"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.4"	""	"31.3"	""	"29.6"	""	"25.7"	""	"39.9"	"45.3"	""	"696"	"61"	"35.000"	"28.000"	"2.98936705483878E-05"	"17"	"0.0002479"	"0.005149"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDNGGYYISPR"	"[R].sLDnGGYYISPR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"786.39624"	"1571.78520"	"1571.79030"	"-3.24"	"-0.00255"	"7/122"	"7"	"122"	"368327.337341309"	"HCD"	"MS2"	"26.27119"	"22.0"	"100.000"	"69.3485"	"23163"	"23163"	"23139"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.3"	""	"27.2"	""	"22.8"	""	"40.5"	""	"41.2"	"46.9"	""	"635"	"38"	"35.000"	"28.000"	"0.00479450448947117"	"16"	"0"	"0.0001052"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDNGGYYISPR"	"[R].sLDnGGYYISPR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"786.39655"	"1571.78581"	"1571.79030"	"-2.86"	"-0.00224"	"7/122"	"7"	"122"	"355081.828552246"	"HCD"	"MS2"	"30.55254"	"21.8"	"100.000"	"69.1854"	"23111"	"23111"	"23086"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.6"	""	"23.3"	""	"22.7"	""	"43.5"	""	"53.1"	"41.9"	""	"634"	"38"	"35.000"	"28.000"	"0.00471041598604982"	"17"	"0"	"0.001549"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDNGGYYISPR"	"[R].sLDnGGYYISPR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.39801"	"1571.78874"	"1571.79030"	"-0.99"	"-0.00078"	"6/122"	"6"	"122"	"263136.711425781"	"HCD"	"MS2"	"14.87569"	"20.4"	"100.000"	"70.0843"	"23477"	"23477"	"23453"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.8"	""	"23.6"	""	"23.3"	""	"35.1"	""	"42.0"	"51.1"	""	"668"	"26"	"35.000"	"28.000"	"0.0842842578008513"	"14"	"0.0002479"	"0.005738"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDNGGYYISPR"	"[R].sLDnGGYYISPR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"786.39838"	"1571.78948"	"1571.79030"	"-0.53"	"-0.00041"	"8/122"	"8"	"122"	"377846.05847168"	"HCD"	"MS2"	"0"	"22.8"	"100.000"	"69.5057"	"23241"	"23241"	"23224"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.7"	""	"27.0"	""	"27.1"	""	"40.9"	""	"46.7"	"49.6"	""	"669"	"45"	"35.000"	"28.000"	"0.00095586403675892"	"22"	"0"	"0.000722"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDNGGYYISPR"	"[R].sLDnGGYYISPR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.39862"	"1571.78996"	"1571.79030"	"-0.22"	"-0.00017"	"6/122"	"6"	"122"	"278350.938598633"	"HCD"	"MS2"	"21.32296"	"20.6"	"100.000"	"70.2590"	"23534"	"23534"	"23509"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.8"	""	"20.8"	""	"25.9"	""	"33.2"	""	"54.1"	"44.2"	""	"670"	"28"	"35.000"	"28.000"	"0.0516469651738102"	"14"	"0"	"0.003408"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEGAQQGDPLSR"	"[K].iAEGAqQGDPLSR.[F]"	"N-Term(TMT6plex); Q6(Deamidated)"	"1"	"1"	"P81799"	"N-acetyl-D-glucosamine kinase OS=Rattus norvegicus OX=10116 GN=Nagk PE=1 SV=4"	"P81799"	"N-acetyl-D-glucosamine kinase OS=Rattus norvegicus OX=10116 GN=Nagk PE=1 SV=4"	"0"	"2"	"2"	"0.0909"	"0.0000"	"1"	"1"	"1"	"786.42255"	"1571.83782"	"1571.82267"	"9.64"	"0.00758"	"6/128"	"6"	"128"	"243532.407958984"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"51.7059"	"16033"	"16033"	"16005"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.3"	""	"14.6"	""	"16.7"	""	"23.7"	""	"41.6"	"43.4"	""	"836"	"11"	"36.000"	"29.000"	"3.29743529164555"	"19"	"0.005369"	"0.06091"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSDEAALILHR"	"[K].gYSDEAALILHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P28494"	"Alpha-mannosidase 2 OS=Rattus norvegicus OX=10116 GN=Man2a1 PE=1 SV=2"	"P28494"	"Alpha-mannosidase 2 OS=Rattus norvegicus OX=10116 GN=Man2a1 PE=1 SV=2"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"525.28900"	"1573.85245"	"1573.85357"	"-0.71"	"-0.00037"	"8/92"	"8"	"92"	"5428644.31463623"	"HCD"	"MS2"	"37.24622"	"71.5"	"100.000"	"71.3786"	"23991"	"23991"	"23971"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"102.0"	""	"66.6"	""	"62.7"	""	"188.4"	""	"96.3"	"162.4"	""	"1014"	"23"	"37.000"	"30.000"	"0.264854867822554"	"17"	"0"	"0.0001624"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSDEAALILHR"	"[K].gYSDEAALILHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P28494"	"Alpha-mannosidase 2 OS=Rattus norvegicus OX=10116 GN=Man2a1 PE=1 SV=2"	"P28494"	"Alpha-mannosidase 2 OS=Rattus norvegicus OX=10116 GN=Man2a1 PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"525.28925"	"1573.85318"	"1573.85357"	"-0.25"	"-0.00013"	"16/92"	"16"	"92"	"4769962.18133545"	"HCD"	"MS2"	"27.86218"	"61.7"	"100.000"	"71.2850"	"23966"	"23966"	"23951"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"80.8"	""	"64.6"	""	"62.6"	""	"159.0"	""	"80.7"	"138.2"	""	"1015"	"24"	"37.000"	"30.000"	"0.182993661333483"	"17"	"0"	"0.001154"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLPDADKER"	"[K].aTLPDADkER.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"1"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"525.30243"	"1573.89273"	"1573.89499"	"-1.43"	"-0.00075"	"5/90"	"5"	"90"	"4123527.57733154"	"HCD"	"MS2"	"11.53441"	"163.9"	"100.000"	"39.1445"	"10921"	"10921"	"10899"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"285.3"	""	"167.4"	""	"151.0"	""	"252.1"	""	"345.9"	"354.5"	""	"984"	"20"	"36.000"	"29.000"	"0.495410381075088"	"16"	"0.001374"	"0.01694"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLPDADKER"	"[K].aTLPDADkER.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"1"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"525.30280"	"1573.89383"	"1573.89499"	"-0.74"	"-0.00039"	"5/90"	"5"	"90"	"5653072.68798828"	"HCD"	"MS2"	"11.06743"	"209.4"	"100.000"	"39.2578"	"10958"	"10958"	"10940"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"374.7"	""	"214.4"	""	"193.9"	""	"330.1"	""	"457.7"	"418.0"	""	"982"	"16"	"36.000"	"29.000"	"1.36483921446981"	"19"	"0.006443"	"0.0731"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELREDSPAAK"	"[R].eLREDSPAAk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"525.30414"	"1573.89786"	"1573.89499"	"1.82"	"0.00096"	"6/96"	"6"	"96"	"6043325.894104"	"HCD"	"MS2"	"28.53733"	"243.3"	"100.000"	"33.3058"	"8550"	"8550"	"8528"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"369.2"	""	"304.1"	""	"244.1"	""	"478.1"	""	"452.5"	"462.1"	""	"895"	"8"	"36.000"	"29.000"	"7.14155918388438"	"13"	"0.006308"	"0.07167"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNPPVDATPDTR"	"[R].yNPPVDATPDTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M9G8"	"DDB1- and CUL4-associated factor 11 OS=Rattus norvegicus OX=10116 GN=Dcaf11 PE=1 SV=1"	"Q5M9G8"	"DDB1- and CUL4-associated factor 11 OS=Rattus norvegicus OX=10116 GN=Dcaf11 PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"787.90442"	"1574.80156"	"1574.80120"	"0.23"	"0.00018"	"6/118"	"6"	"118"	"96098.0040893555"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"49.2146"	"15018"	"15018"	"14988"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.8"	""	"8.0"	""	"10.4"	""	"13.6"	""	"11.6"	"15.1"	""	"773"	"16"	"35.000"	"28.000"	"0.950932079003058"	"14"	"0.003507"	"0.03637"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSDPQPGFLER"	"[K].vTSDPQPGFLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"525.61676"	"1574.83573"	"1574.83759"	"-1.18"	"-0.00062"	"11/118"	"11"	"118"	"1366099.76165771"	"HCD"	"MS2"	"17.09871"	"27.3"	"100.000"	"66.4305"	"21988"	"21988"	"21965"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.0"	""	"29.7"	""	"42.4"	""	"44.9"	""	"51.3"	"55.9"	""	"1018"	"33"	"37.000"	"30.000"	"0.0264069219814841"	"17"	"0"	"0.001231"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSDPQPGFLER"	"[K].vTSDPQPGFLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"787.92157"	"1574.83586"	"1574.83759"	"-1.09"	"-0.00086"	"15/118"	"15"	"118"	"973040.712280273"	"HCD"	"MS2"	"0"	"31.2"	"100.000"	"66.5826"	"22050"	"22050"	"22029"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.9"	""	"39.2"	""	"37.2"	""	"65.9"	"0.1"	"51.5"	"60.6"	""	"1018"	"31"	"37.000"	"30.000"	"0.038169615255022"	"19"	"0"	"0.0009733"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSDPQPGFLER"	"[K].vTSDPQPGFLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"525.61682"	"1574.83591"	"1574.83759"	"-1.06"	"-0.00056"	"11/118"	"11"	"118"	"1307893.53198242"	"HCD"	"MS2"	"38.79842"	"27.1"	"100.000"	"66.4849"	"21995"	"21995"	"21973"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.5"	""	"31.5"	""	"38.3"	""	"39.3"	"0.4"	"50.0"	"64.1"	""	"1018"	"36"	"37.000"	"30.000"	"0.0126100782733534"	"22"	"0"	"0.0005885"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYPLVTPNEER"	"[K].qYPLVTPNEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"787.92200"	"1574.83672"	"1574.83759"	"-0.55"	"-0.00043"	"7/108"	"7"	"108"	"333174.065124512"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"56.9231"	"18159"	"18159"	"18131"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.7"	""	"12.7"	""	"15.3"	""	"30.0"	""	"32.6"	"38.6"	""	"1011"	"40"	"37.000"	"30.000"	"0.00483861603039544"	"16"	"0"	"0.0003614"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYPLVTPNEER"	"[K].qYPLVTPNEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"787.92200"	"1574.83672"	"1574.83759"	"-0.55"	"-0.00043"	"8/108"	"8"	"108"	"437559.109741211"	"HCD"	"MS2"	"34.5308"	"30.8"	"100.000"	"57.2386"	"18287"	"18287"	"18265"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.7"	""	"35.1"	""	"40.4"	""	"51.0"	""	"58.9"	"61.7"	""	"1011"	"28"	"37.000"	"30.000"	"0.0722305896027363"	"16"	"0.006685"	"0.07503"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSDPQPGFLER"	"[K].vTSDPQPGFLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"525.61713"	"1574.83683"	"1574.83759"	"-0.48"	"-0.00025"	"6/118"	"6"	"118"	"442918.486755371"	"HCD"	"MS2"	"54.62915"	"19.3"	"100.000"	"66.7484"	"22118"	"22118"	"22093"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.6"	""	"24.5"	""	"23.1"	""	"30.4"	""	"40.7"	"40.0"	""	"1021"	"7"	"37.000"	"30.000"	"10.4711829229045"	"13"	"0.0003538"	"0.006795"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSDPQPGFLER"	"[K].vTSDPQPGFLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"525.61719"	"1574.83701"	"1574.83759"	"-0.37"	"-0.00019"	"10/118"	"10"	"118"	"554406.564697266"	"HCD"	"MS2"	"57.82593"	"19.3"	"100.000"	"66.8027"	"22125"	"22125"	"22100"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.6"	""	"24.2"	""	"29.8"	""	"30.9"	""	"38.6"	"36.6"	""	"1019"	"13"	"37.000"	"30.000"	"2.61302875143601"	"13"	"0.0004639"	"0.008042"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSDPQPGFLER"	"[K].vTSDPQPGFLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"787.92236"	"1574.83745"	"1574.83759"	"-0.09"	"-0.00007"	"6/118"	"6"	"118"	"290992.011108398"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"66.3465"	"21939"	"21939"	"21911"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.6"	""	"20.3"	""	"22.9"	""	"28.3"	"1.3"	"27.5"	"29.4"	""	"1024"	"41"	"37.000"	"30.000"	"0.00424883592967384"	"19"	"0.0001301"	"0.004716"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSDPQPGFLER"	"[K].vTSDPQPGFLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"787.92249"	"1574.83769"	"1574.83759"	"0.07"	"0.00005"	"10/118"	"10"	"118"	"934554.568115234"	"HCD"	"MS2"	"0"	"42.5"	"100.000"	"66.6761"	"22073"	"22073"	"22052"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.0"	""	"57.6"	""	"47.5"	""	"77.0"	""	"68.3"	"87.2"	""	"1021"	"43"	"37.000"	"30.000"	"0.00261213577043328"	"21"	"0"	"0.0001234"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYPLVTPNEER"	"[K].qYPLVTPNEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"787.92303"	"1574.83879"	"1574.83759"	"0.77"	"0.00060"	"7/108"	"7"	"108"	"307852.434265137"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"57.1001"	"18217"	"18217"	"18192"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.3"	""	"20.6"	""	"20.9"	""	"30.2"	""	"28.7"	"31.0"	""	"1052"	"39"	"37.000"	"30.000"	"0.0062084865435281"	"15"	"0"	"0.0006939"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPAESVDNLGK"	"[K].sPAESVDNLGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"787.94275"	"1574.87822"	"1574.87901"	"-0.50"	"-0.00039"	"7/98"	"7"	"98"	"266493.911315918"	"HCD"	"MS2"	"29.4474"	"22.8"	"100.000"	"57.3630"	"18338"	"18338"	"18313"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.3"	""	"29.2"	""	"29.4"	""	"37.3"	""	"42.3"	"47.8"	""	"1045"	"25"	"37.000"	"30.000"	"0.167142269481376"	"14"	"0.003449"	"0.03374"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVVVGTITDDVR"	"[K].tAVVVGTITDDVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"2"	"2"	"0.8909"	"0.0000"	"1"	"1"	"1"	"787.95050"	"1574.89372"	"1574.89510"	"-0.87"	"-0.00069"	"7/116"	"7"	"116"	"209734.591369629"	"HCD"	"MS2"	"14.06287"	"9.5"	"100.000"	"80.3049"	"27603"	"27603"	"27581"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.0"	""	"13.3"	""	"11.7"	""	"16.6"	""	"17.7"	"19.5"	""	"977"	"55"	"36.000"	"29.000"	"0.000141209712253553"	"22"	"0"	"4.853E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVVVGTITDDVR"	"[K].tAVVVGTITDDVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"787.95074"	"1574.89421"	"1574.89510"	"-0.56"	"-0.00044"	"7/116"	"7"	"116"	"258744.766052246"	"HCD"	"MS2"	"59.21222"	"13.4"	"100.000"	"80.2702"	"27589"	"27589"	"27566"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.4"	""	"15.5"	""	"13.6"	""	"25.5"	""	"27.4"	"30.2"	""	"975"	"37"	"36.000"	"29.000"	"0.0107888367093275"	"19"	"0"	"6.778E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVVVGTITDDVR"	"[K].tAVVVGTITDDVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"787.95087"	"1574.89446"	"1574.89510"	"-0.41"	"-0.00032"	"15/116"	"15"	"116"	"181284.62713623"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"80.3239"	"27614"	"27614"	"27594"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.6"	""	"11.7"	""	"14.7"	""	"12.2"	""	"16.8"	"16.0"	""	"970"	"64"	"36.000"	"29.000"	"1.84391857215472E-05"	"26"	"0"	"2.786E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEDEAEAGVK"	"[K].vAEDEAEAGVk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q794F9"	"4F2 cell-surface antigen heavy chain OS=Rattus norvegicus OX=10116 GN=Slc3a2 PE=1 SV=1"	"Q794F9"	"4F2 cell-surface antigen heavy chain OS=Rattus norvegicus OX=10116 GN=Slc3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"788.43573"	"1575.86418"	"1575.86302"	"0.74"	"0.00058"	"8/88"	"8"	"88"	"234440.737487793"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"50.0257"	"15349"	"15349"	"15318"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.6"	""	"22.4"	""	"24.0"	""	"41.4"	""	"53.2"	"48.8"	""	"1061"	"32"	"37.000"	"30.000"	"0.0354556448270151"	"23"	"0"	"0.003236"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEDEAEAGVK"	"[K].vAEDEAEAGVk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q794F9"	"4F2 cell-surface antigen heavy chain OS=Rattus norvegicus OX=10116 GN=Slc3a2 PE=1 SV=1"	"Q794F9"	"4F2 cell-surface antigen heavy chain OS=Rattus norvegicus OX=10116 GN=Slc3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7424"	"0.0000"	"1"	"1"	"1"	"788.43573"	"1575.86418"	"1575.86302"	"0.74"	"0.00058"	"10/88"	"10"	"88"	"304414.802978516"	"HCD"	"MS2"	"23.90501"	"27.2"	"100.000"	"50.4248"	"15500"	"15500"	"15470"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.4"	""	"24.4"	""	"25.6"	""	"45.8"	"0.1"	"70.9"	"56.0"	""	"1061"	"66"	"37.000"	"30.000"	"1.22937786180828E-05"	""	"0"	"3.946E-06"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQYEHSVQISR"	"[K].tQYEHSVQISR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"788.91614"	"1576.82500"	"1576.82809"	"-1.96"	"-0.00154"	"6/116"	"6"	"116"	"193890.44732666"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"33.8522"	"8778"	"8778"	"8747"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.0"	""	"12.2"	""	"13.2"	""	"23.7"	""	"30.7"	"29.6"	""	"914"	"16"	"36.000"	"29.000"	"1.05661360911025"	"14"	"0.008668"	"0.1083"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQYEHSVQISR"	"[K].tQYEHSVQISR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.9434"	"0.0000"	"1"	"1"	"1"	"526.28058"	"1576.82718"	"1576.82809"	"-0.57"	"-0.00030"	"9/116"	"9"	"116"	"12773028.4379883"	"HCD"	"MS2"	"7.374112"	"165.6"	"100.000"	"33.7971"	"8755"	"8755"	"8731"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"157.4"	""	"205.9"	""	"203.4"	""	"312.7"	""	"336.2"	"358.1"	""	"989"	"53"	"36.000"	"29.000"	"0.000249555011645165"	"19"	"0"	"6.045E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQYEHSVQISR"	"[K].tQYEHSVQISR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"788.91730"	"1576.82732"	"1576.82809"	"-0.49"	"-0.00038"	"8/116"	"8"	"116"	"127167.418518066"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"33.9479"	"8807"	"8807"	"8777"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.9"	""	"10.1"	""	"13.2"	""	"18.6"	""	"17.2"	"17.7"	""	"985"	"11"	"36.000"	"29.000"	"3.96648882290541"	"16"	"0.005001"	"0.05638"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQYEHSVQISR"	"[K].tQYEHSVQISR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.8871"	"0.0000"	"1"	"1"	"1"	"526.28076"	"1576.82773"	"1576.82809"	"-0.22"	"-0.00012"	"10/116"	"10"	"116"	"10554293.4846191"	"HCD"	"MS2"	"15.49308"	"168.2"	"100.000"	"33.7882"	"8745"	"8745"	"8721"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"165.1"	""	"204.2"	""	"216.5"	""	"303.0"	""	"345.3"	"366.2"	""	"987"	"62"	"36.000"	"29.000"	"2.90594343917983E-05"	"23"	"0"	"1.526E-05"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLAPEYEAAATR"	"[K].rLAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"1"	"3"	"3"	"0.9821"	"0.0000"	"1"	"1"	"1"	"526.29242"	"1576.86271"	"1576.86447"	"-1.12"	"-0.00059"	"8/122"	"8"	"122"	"2620397.59362793"	"HCD"	"MS2"	"7.731189"	"56.2"	"100.000"	"38.3357"	"10583"	"10583"	"10562"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.3"	""	"64.4"	""	"83.1"	""	"94.4"	"2.9"	"111.4"	"108.3"	""	"1153"	"56"	"37.000"	"30.000"	"0.000134833966808712"	"17"	"0"	"4.122E-06"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAMPGEDLK"	"[K].eLAmPGEDLk.[L]"	"N-Term(TMT6plex); M4(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"788.93524"	"1576.86321"	"1576.86567"	"-1.56"	"-0.00123"	"7/86"	"7"	"86"	"326315.963928223"	"HCD"	"MS2"	"0"	"24.7"	"100.000"	"62.3474"	"20331"	"20331"	"20313"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.0"	""	"22.3"	""	"34.3"	""	"72.7"	""	"45.6"	"34.5"	""	"1193"	"36"	"37.000"	"30.000"	"0.015689548571656"	""	"0.000936"	"0.01292"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLAPEYEAAATR"	"[K].rLAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.29272"	"1576.86362"	"1576.86447"	"-0.54"	"-0.00028"	"10/122"	"10"	"122"	"5246956.61755371"	"HCD"	"MS2"	"6.318796"	"69.5"	"100.000"	"37.8867"	"10408"	"10408"	"10388"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"107.5"	""	"85.5"	""	"95.3"	""	"107.4"	""	"126.6"	"135.9"	""	"1192"	"70"	"37.000"	"30.000"	"6.35691288253234E-06"	"17"	"0"	"1.031E-06"	"1.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEMPEAAVK"	"[R].iDEmPEAAVk.[S]"	"N-Term(TMT6plex); M4(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q8VHK7"	"Hepatoma-derived growth factor OS=Rattus norvegicus OX=10116 GN=Hdgf PE=1 SV=2"	"Q8VHK7"	"Hepatoma-derived growth factor OS=Rattus norvegicus OX=10116 GN=Hdgf PE=1 SV=2"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"788.93561"	"1576.86394"	"1576.86567"	"-1.10"	"-0.00086"	"16/80"	"16"	"80"	"261436.632080078"	"HCD"	"MS2"	"0"	"18.8"	"100.000"	"56.9045"	"18137"	"18137"	"18115"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.0"	""	"12.6"	""	"14.4"	""	"62.9"	""	"36.2"	"41.0"	""	"1183"	"40"	"37.000"	"30.000"	"0.00543193730820038"	"16"	"0.000936"	"0.01236"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAMPGEDLK"	"[K].eLAmPGEDLk.[L]"	"N-Term(TMT6plex); M4(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.4054"	"0.0000"	"1"	"1"	"1"	"788.93573"	"1576.86418"	"1576.86567"	"-0.94"	"-0.00074"	"7/86"	"7"	"86"	"420043.583435059"	"HCD"	"MS2"	"8.778182"	"31.4"	"100.000"	"62.8024"	"20501"	"20501"	"20474"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.5"	""	"29.4"	""	"39.5"	""	"93.5"	""	"49.8"	"49.4"	""	"1189"	"37"	"37.000"	"30.000"	"0.0126226883265913"	""	"0.001211"	"0.0151"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEMPEAAVK"	"[R].iDEmPEAAVk.[S]"	"N-Term(TMT6plex); M4(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q8VHK7"	"Hepatoma-derived growth factor OS=Rattus norvegicus OX=10116 GN=Hdgf PE=1 SV=2"	"Q8VHK7"	"Hepatoma-derived growth factor OS=Rattus norvegicus OX=10116 GN=Hdgf PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"788.93579"	"1576.86431"	"1576.86567"	"-0.86"	"-0.00068"	"14/80"	"14"	"80"	"382739.597473145"	"HCD"	"MS2"	"15.50453"	"29.3"	"100.000"	"57.4481"	"18373"	"18373"	"18345"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.0"	""	"25.0"	""	"27.6"	""	"85.6"	"1.4"	"51.7"	"52.9"	""	"1192"	"37"	"37.000"	"30.000"	"0.0116210738145579"	"15"	"0.00263"	"0.0258"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAMPGEDLK"	"[K].eLAmPGEDLk.[L]"	"N-Term(TMT6plex); M4(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.3947"	"0.0000"	"1"	"1"	"1"	"788.93585"	"1576.86443"	"1576.86567"	"-0.79"	"-0.00062"	"7/86"	"7"	"86"	"439515.453979492"	"HCD"	"MS2"	"0"	"33.7"	"100.000"	"62.6625"	"20460"	"20460"	"20433"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.7"	""	"31.0"	""	"46.2"	""	"97.3"	"1.1"	"54.2"	"60.6"	""	"1185"	"38"	"37.000"	"30.000"	"0.00909260562308581"	""	"0.0003538"	"0.007076"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ELAMPGEDLK"	"[K].eLAmPGEDLk.[L]"	"N-Term(TMT6plex); M4(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	""	"0.0417"	"2"	"2"	"2"	"788.93591"	"1576.86455"	"1576.86567"	"-0.71"	"-0.00056"	"9/86"	"9"	"86"	"337328.241149902"	"HCD"	"MS2"	"0"	"26.4"	"100.000"	"62.4917"	"20374"	"20374"	"20351"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.5"	""	"27.9"	""	"34.7"	""	"69.5"	"1.3"	"51.7"	"39.5"	""	"1168"	"23"	"37.000"	"30.000"	"0.314349552989512"	"23"	"0.001812"	"0.02045"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEMPEAAVK"	"[R].iDEmPEAAVk.[S]"	"N-Term(TMT6plex); M4(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q8VHK7"	"Hepatoma-derived growth factor OS=Rattus norvegicus OX=10116 GN=Hdgf PE=1 SV=2"	"Q8VHK7"	"Hepatoma-derived growth factor OS=Rattus norvegicus OX=10116 GN=Hdgf PE=1 SV=2"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"788.93658"	"1576.86589"	"1576.86567"	"0.14"	"0.00011"	"8/80"	"8"	"80"	"364075.390380859"	"HCD"	"MS2"	"0"	"32.9"	"100.000"	"57.5907"	"18416"	"18416"	"18394"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.6"	""	"32.2"	""	"34.0"	""	"85.9"	"2.1"	"62.6"	"60.5"	""	"1163"	"17"	"37.000"	"30.000"	"1.29285470141379"	"22"	"0.004606"	"0.04994"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLAPEYEAAATR"	"[K].rLAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"1"	"3"	"3"	"0.9608"	"0.0000"	"1"	"1"	"1"	"526.29407"	"1576.86765"	"1576.86447"	"2.02"	"0.00106"	"11/122"	"11"	"122"	"2299466.37054443"	"HCD"	"MS2"	"24.06729"	"48.2"	"100.000"	"38.0231"	"10456"	"10456"	"10436"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.2"	""	"54.7"	""	"59.0"	""	"87.0"	""	"94.4"	"99.6"	""	"1160"	"51"	"37.000"	"30.000"	"0.000478000106707541"	"17"	"0"	"1.169E-05"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEMPEAAVK"	"[R].iDEmPEAAVk.[S]"	"N-Term(TMT6plex); M4(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q8VHK7"	"Hepatoma-derived growth factor OS=Rattus norvegicus OX=10116 GN=Hdgf PE=1 SV=2"	"Q8VHK7"	"Hepatoma-derived growth factor OS=Rattus norvegicus OX=10116 GN=Hdgf PE=1 SV=2"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"788.93750"	"1576.86772"	"1576.86567"	"1.30"	"0.00103"	"14/80"	"14"	"80"	"265118.010192871"	"HCD"	"MS2"	"0"	"19.7"	"100.000"	"56.6951"	"18066"	"18066"	"18038"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.8"	""	"12.0"	""	"15.5"	""	"72.0"	""	"36.7"	"32.1"	""	"1160"	"46"	"37.000"	"30.000"	"0.00133791336945764"	"17"	"0.0002479"	"0.0052"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDEELDSLIK"	"[R].gDEELDSLIk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P0C0S7"	"Histone H2A.Z OS=Rattus norvegicus OX=10116 GN=H2afz PE=1 SV=2"	"P0C0S7"	"Histone H2A.Z OS=Rattus norvegicus OX=10116 GN=H2afz PE=1 SV=2"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"526.29858"	"1576.88120"	"1576.88342"	"-1.41"	"-0.00074"	"9/82"	"9"	"82"	"578174.452697754"	"HCD"	"MS2"	"51.68993"	"17.7"	"100.000"	"90.3878"	"31568"	"31568"	"31557"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.4"	""	"19.0"	""	"21.8"	""	"40.5"	""	"37.7"	"31.8"	""	"1117"	"12"	"37.000"	"30.000"	"3.94478354055865"	"18"	"0.002711"	"0.026"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDSSINWNNLK"	"[K].ASDSSINWNNLk.[G]"	"K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"789.40930"	"1577.81133"	"1577.81210"	"-0.49"	"-0.00039"	"6/104"	"6"	"104"	"140173.765075684"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"73.1489"	"24712"	"24712"	"24686"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.2"	""	"14.5"	""	"11.3"	""	"15.7"	""	"16.7"	"13.8"	""	"953"	"26"	"36.000"	"29.000"	"0.130937156395329"	"19"	"0.003967"	"0.042"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDSSINWNNLK"	"[K].ASDSSINWNNLk.[G]"	"K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"789.40961"	"1577.81194"	"1577.81210"	"-0.10"	"-0.00008"	"6/104"	"6"	"104"	"142202.156616211"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"73.3713"	"24815"	"24815"	"24791"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.6"	""	"14.9"	""	"13.1"	""	"17.2"	""	"14.4"	"13.6"	""	"960"	"39"	"36.000"	"29.000"	"0.00662584447009384"	"16"	"0.000936"	"0.01195"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADQIETQQLMR"	"[K].aDQIETQQLmR.[V]"	"N-Term(TMT6plex); M10(Oxidation)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"789.40973"	"1577.81218"	"1577.81547"	"-2.09"	"-0.00165"	"7/104"	"7"	"104"	"159448.71875"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"46.7442"	"13999"	"13999"	"13982"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.0"	""	"12.0"	""	"14.0"	""	"19.7"	""	"22.6"	"19.8"	""	"949"	"23"	"36.000"	"29.000"	"0.229211401567872"	"15"	"0.002056"	"0.02226"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDSSINWNNLK"	"[K].ASDSSINWNNLk.[G]"	"K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"789.40985"	"1577.81243"	"1577.81210"	"0.21"	"0.00016"	"6/104"	"6"	"104"	"211999.367614746"	"HCD"	"MS2"	"6.40652"	"12.5"	"100.000"	"73.4445"	"24831"	"24831"	"24812"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.6"	""	"15.8"	""	"22.3"	""	"17.0"	""	"15.3"	"24.1"	""	"949"	"39"	"36.000"	"29.000"	"0.00581080386551266"	"15"	"0.0002479"	"0.00604"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDSSINWNNLK"	"[K].ASDSSINWNNLk.[G]"	"K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"789.40991"	"1577.81255"	"1577.81210"	"0.28"	"0.00022"	"7/104"	"7"	"104"	"270631.631652832"	"HCD"	"MS2"	"20.23511"	"15.5"	"100.000"	"73.0575"	"24688"	"24688"	"24668"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.1"	""	"20.5"	""	"19.8"	""	"29.1"	""	"23.3"	"29.8"	""	"949"	"48"	"36.000"	"29.000"	"0.000803963286312257"	"15"	"0"	"0.001153"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADQIETQQLMR"	"[K].aDQIETQQLmR.[V]"	"N-Term(TMT6plex); M10(Oxidation)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"789.41125"	"1577.81523"	"1577.81547"	"-0.15"	"-0.00012"	"7/104"	"7"	"104"	"320239.598266602"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"46.4510"	"13881"	"13881"	"13852"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.1"	""	"15.2"	""	"23.1"	""	"29.2"	""	"39.5"	"35.7"	""	"970"	"37"	"36.000"	"29.000"	"0.00901035160719472"	"25"	"0"	"0.001389"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADQIETQQLMR"	"[K].aDQIETQQLmR.[V]"	"N-Term(TMT6plex); M10(Oxidation)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"789.41132"	"1577.81536"	"1577.81547"	"-0.07"	"-0.00006"	"8/104"	"8"	"104"	"455512.115356445"	"HCD"	"MS2"	"0"	"23.0"	"100.000"	"46.2855"	"13825"	"13825"	"13801"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.1"	""	"21.4"	""	"23.8"	""	"54.4"	""	"45.1"	"47.9"	""	"977"	"43"	"36.000"	"29.000"	"0.00258145505492175"	"21"	"0"	"0.001288"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEGHPVGDPLK"	"[K].aEGHPVGDPLk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.63910"	"1577.90274"	"1577.90516"	"-1.53"	"-0.00081"	"6/92"	"6"	"92"	"1560371.04040527"	"HCD"	"MS2"	"51.95617"	"57.1"	"100.000"	"41.7135"	"11967"	"11967"	"11937"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"93.3"	""	"70.3"	""	"85.1"	""	"84.2"	""	"103.7"	"104.2"	""	"998"	"31"	"36.000"	"29.000"	"0.040841392927926"	"15"	"0"	"0.0008813"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEAGDVMGGHAIR"	"[K].hEAGDVMGGHAIR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P00787"	"Cathepsin B OS=Rattus norvegicus OX=10116 GN=Ctsb PE=1 SV=2"	"P00787"	"Cathepsin B OS=Rattus norvegicus OX=10116 GN=Ctsb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.93726"	"1578.79721"	"1578.80082"	"-2.29"	"-0.00120"	"17/102"	"17"	"102"	"4343805.43762207"	"HCD"	"MS2"	"31.47961"	"127.1"	"100.000"	"26.9026"	"5945"	"5945"	"5921"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"194.5"	"2.7"	"156.5"	""	"183.8"	""	"200.2"	"1.2"	"238.7"	"226.3"	""	"867"	"35"	"36.000"	"29.000"	"0.0133042103196757"	"15"	"0"	"1.849E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEAGDVMGGHAIR"	"[K].hEAGDVMGGHAIR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P00787"	"Cathepsin B OS=Rattus norvegicus OX=10116 GN=Ctsb PE=1 SV=2"	"P00787"	"Cathepsin B OS=Rattus norvegicus OX=10116 GN=Ctsb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.93732"	"1578.79740"	"1578.80082"	"-2.17"	"-0.00114"	"18/102"	"18"	"102"	"4571214.81036377"	"HCD"	"MS2"	"30.01247"	"131.4"	"100.000"	"26.8402"	"5936"	"5936"	"5910"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"202.6"	""	"168.0"	""	"191.1"	""	"224.1"	""	"230.5"	"227.4"	""	"868"	"36"	"36.000"	"29.000"	"0.0109015871127516"	"15"	"0"	"2.12E-06"	"1.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEAGDVMGGHAIR"	"[K].hEAGDVMGGHAIR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P00787"	"Cathepsin B OS=Rattus norvegicus OX=10116 GN=Ctsb PE=1 SV=2"	"P00787"	"Cathepsin B OS=Rattus norvegicus OX=10116 GN=Ctsb PE=1 SV=2"	"0"	"4"	"4"	"0.9091"	"0.0000"	"1"	"1"	"1"	"395.45511"	"1578.79860"	"1578.80082"	"-1.41"	"-0.00056"	"9/102"	"9"	"102"	"10539346.178772"	"HCD"	"MS2"	"16.71018"	"226.0"	"89.687"	"26.7598"	"5903"	"5903"	"5882"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"356.8"	""	"320.4"	""	"333.1"	""	"291.9"	"3.3"	"394.1"	"440.0"	""	"879"	"66"	"36.000"	"29.000"	"1.19938573554413E-05"	"22"	"0"	"2.069E-06"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEAGDVMGGHAIR"	"[K].hEAGDVMGGHAIR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P00787"	"Cathepsin B OS=Rattus norvegicus OX=10116 GN=Ctsb PE=1 SV=2"	"P00787"	"Cathepsin B OS=Rattus norvegicus OX=10116 GN=Ctsb PE=1 SV=2"	"0"	"4"	"4"	"0.9219"	"0.0000"	"1"	"1"	"1"	"395.45517"	"1578.79885"	"1578.80082"	"-1.25"	"-0.00049"	"9/102"	"9"	"102"	"9456827.77532959"	"HCD"	"MS2"	"30.56046"	"182.3"	"83.204"	"26.7924"	"5900"	"5900"	"5880"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"272.7"	""	"277.2"	""	"274.1"	""	"228.2"	"2.3"	"326.8"	"344.6"	""	"877"	"64"	"36.000"	"29.000"	"1.73368262899874E-05"	"21"	"0"	"9.066E-07"	"1.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPEDGLSEDK"	"[K].mPEDGLSEDk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"789.90759"	"1578.80791"	"1578.80854"	"-0.40"	"-0.00032"	"7/84"	"7"	"84"	"187981.673706055"	"HCD"	"MS2"	"0"	"14.1"	"100.000"	"60.1929"	"19462"	"19462"	"19441"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.1"	""	"10.3"	""	"14.8"	""	"20.3"	""	"38.9"	"32.2"	""	"937"	"22"	"36.000"	"29.000"	"0.290208143673472"	"15"	"0.007627"	"0.09094"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPHINPTDANAR"	"[R].gSPHINPTDANAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.94415"	"1578.81791"	"1578.81858"	"-0.43"	"-0.00023"	"8/124"	"8"	"124"	"2472905.35339355"	"HCD"	"MS2"	"5.497544"	"73.0"	"100.000"	"26.5786"	"5829"	"5829"	"5809"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.6"	""	"97.6"	""	"104.0"	""	"121.7"	"3.3"	"140.2"	"118.9"	""	"1021"	"17"	"37.000"	"30.000"	"0.963819583713659"	"14"	"0.004431"	"0.04631"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDESIRPFK"	"[K].eDESIRPFk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"526.96729"	"1578.88730"	"1578.88918"	"-1.19"	"-0.00063"	"7/76"	"7"	"76"	"3019653.12139893"	"HCD"	"MS2"	"23.49059"	"140.0"	"100.000"	"52.2556"	"16257"	"16257"	"16236"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"209.1"	""	"171.0"	""	"170.9"	""	"237.3"	"0.4"	"291.9"	"247.5"	""	"1059"	"8"	"37.000"	"30.000"	"8.50875393470318"	"16"	"0.004069"	"0.0444"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDESIRPFK"	"[K].eDESIRPFk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.96765"	"1578.88840"	"1578.88918"	"-0.49"	"-0.00026"	"7/76"	"7"	"76"	"1452910.63946533"	"HCD"	"MS2"	"15.64193"	"68.6"	"100.000"	"52.8573"	"16491"	"16491"	"16471"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"105.9"	""	"77.9"	""	"84.3"	""	"110.1"	""	"137.4"	"140.0"	""	"1040"	"6"	"37.000"	"30.000"	"13.8996333250492"	"13"	"0.008777"	"0.1129"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMVGDEASELR"	"[K].dLmVGDEASELR.[S]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"790.39319"	"1579.77910"	"1579.78350"	"-2.79"	"-0.00220"	"6/106"	"6"	"106"	"127180.971923828"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"68.7547"	"22935"	"22935"	"22911"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.3"	""	"9.1"	""	"15.5"	""	"13.4"	""	"14.8"	"17.1"	""	"788"	"18"	"35.000"	"28.000"	"0.63022586327418"	"24"	"0.00736"	"0.08466"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMVGDEASELR"	"[K].dLmVGDEASELR.[S]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"790.39465"	"1579.78203"	"1579.78350"	"-0.93"	"-0.00074"	"5/106"	"5"	"106"	"150150.898864746"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"68.0975"	"22667"	"22667"	"22642"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.2"	""	"14.5"	""	"16.0"	""	"18.3"	""	"25.7"	"24.0"	""	"794"	"25"	"35.000"	"28.000"	"0.139891235803867"	"20"	"0.005183"	"0.05888"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMVGDEASELR"	"[K].dLmVGDEASELR.[S]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"790.39465"	"1579.78203"	"1579.78350"	"-0.93"	"-0.00074"	"9/106"	"9"	"106"	"156430.205505371"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"69.1686"	"23090"	"23090"	"23059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.5"	""	"9.6"	""	"17.3"	""	"11.8"	""	"12.4"	"18.0"	""	"794"	"21"	"35.000"	"28.000"	"0.317534199237791"	"20"	"0.004942"	"0.05449"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMVGDEASELR"	"[K].dLmVGDEASELR.[S]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"790.39478"	"1579.78227"	"1579.78350"	"-0.78"	"-0.00061"	"4/106"	"4"	"106"	"174134.27911377"	"HCD"	"MS2"	"0"	"12.1"	"100.000"	"69.4503"	"23219"	"23219"	"23192"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.9"	""	"17.5"	""	"16.7"	""	"15.2"	""	"21.1"	"24.7"	""	"802"	"11"	"36.000"	"29.000"	"2.87835510799816"	"15"	"0.003111"	"0.031"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMVGDEASELR"	"[K].dLmVGDEASELR.[S]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"790.39478"	"1579.78227"	"1579.78350"	"-0.78"	"-0.00061"	"6/106"	"6"	"106"	"164479.894836426"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"68.7813"	"22932"	"22932"	"22901"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.7"	""	"8.2"	""	"16.8"	""	"15.0"	""	"20.5"	"17.7"	""	"802"	"34"	"36.000"	"29.000"	"0.014796001702663"	"20"	"0.002147"	"0.02282"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMVGDEASELR"	"[K].dLmVGDEASELR.[S]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"0.9038"	"0.0000"	"1"	"1"	"1"	"790.39484"	"1579.78240"	"1579.78350"	"-0.70"	"-0.00055"	"9/106"	"9"	"106"	"553267.677734375"	"HCD"	"MS2"	"0"	"27.1"	"100.000"	"66.6241"	"22067"	"22067"	"22045"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.8"	""	"24.9"	""	"36.1"	""	"61.1"	""	"55.4"	"44.0"	""	"801"	"52"	"36.000"	"29.000"	"0.000282880180482316"	"21"	"0.0001301"	"0.003863"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMVGDEASELR"	"[K].dLmVGDEASELR.[S]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"790.39514"	"1579.78301"	"1579.78350"	"-0.31"	"-0.00025"	"10/106"	"10"	"106"	"419926.635070801"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"66.3119"	"21925"	"21925"	"21896"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.4"	""	"29.7"	""	"24.9"	""	"50.2"	""	"40.2"	"35.4"	""	"807"	"54"	"36.000"	"29.000"	"0.000158797455446406"	"21"	"0.0002479"	"0.005757"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMVGDEASELR"	"[K].dLmVGDEASELR.[S]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"0.9298"	"0.0000"	"1"	"1"	"1"	"790.39551"	"1579.78374"	"1579.78350"	"0.15"	"0.00012"	"10/106"	"10"	"106"	"438431.578491211"	"HCD"	"MS2"	"0"	"21.7"	"100.000"	"66.2228"	"21903"	"21903"	"21885"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.2"	""	"23.2"	""	"28.7"	""	"47.2"	""	"40.6"	"43.1"	""	"815"	"57"	"36.000"	"29.000"	"8.16822351151304E-05"	"20"	"0"	"0.002962"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMVGDEASELR"	"[K].dLmVGDEASELR.[S]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"790.39569"	"1579.78411"	"1579.78350"	"0.38"	"0.00030"	"10/106"	"10"	"106"	"468413.894165039"	"HCD"	"MS2"	"8.11939"	"25.2"	"100.000"	"66.6853"	"22077"	"22077"	"22052"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.9"	""	"31.9"	""	"31.6"	""	"64.5"	""	"47.1"	"36.3"	""	"819"	"60"	"36.000"	"29.000"	"4.35766565962858E-05"	"22"	"0.0001301"	"0.004042"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMVGDEASELR"	"[K].dLmVGDEASELR.[S]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"790.39575"	"1579.78423"	"1579.78350"	"0.46"	"0.00036"	"10/106"	"10"	"106"	"142753.449645996"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"69.1094"	"23080"	"23080"	"23054"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.7"	""	"11.1"	""	"13.6"	""	"6.6"	""	"16.8"	"17.6"	""	"818"	"22"	"36.000"	"29.000"	"0.267130396032816"	"18"	"0.001374"	"0.01688"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMVGDEASELR"	"[K].dLmVGDEASELR.[S]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"790.39581"	"1579.78435"	"1579.78350"	"0.54"	"0.00042"	"7/106"	"7"	"106"	"175477.488037109"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"69.5166"	"23232"	"23232"	"23203"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.8"	""	"15.5"	""	"11.7"	""	"13.1"	""	"21.9"	"20.3"	""	"818"	"32"	"36.000"	"29.000"	"0.0253935435000096"	"15"	"0.005001"	"0.05692"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMVGDEASELR"	"[K].dLmVGDEASELR.[S]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"790.39594"	"1579.78459"	"1579.78350"	"0.69"	"0.00055"	"5/106"	"5"	"106"	"124490.05682373"	"HCD"	"MS2"	"32.05342"	"10.7"	"100.000"	"68.2718"	"22724"	"22724"	"22694"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.2"	""	"9.0"	""	"12.5"	""	"16.7"	""	"23.9"	"24.2"	""	"816"	"14"	"36.000"	"29.000"	"1.61681437976219"	"16"	"0.004942"	"0.0551"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHDPEGMGIIPR"	"[K].lHDPEGmGIIPR.[I]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"3"	"3"	"0.8723"	"0.0000"	"1"	"1"	"1"	"527.28668"	"1579.84549"	"1579.84638"	"-0.56"	"-0.00030"	"9/92"	"9"	"92"	"1478154.33618164"	"HCD"	"MS2"	"8.15688"	"30.7"	"100.000"	"53.5265"	"16765"	"16765"	"16738"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.0"	""	"28.0"	""	"41.5"	""	"74.5"	""	"61.1"	"56.8"	""	"1173"	"47"	"37.000"	"30.000"	"0.00125103084156047"	"22"	"0"	"2.057E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHDPEGMGIIPR"	"[K].lHDPEGmGIIPR.[I]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"527.28723"	"1579.84714"	"1579.84638"	"0.48"	"0.00025"	"9/92"	"9"	"92"	"1059649.1338501"	"HCD"	"MS2"	"14.57207"	"20.3"	"100.000"	"53.1715"	"16631"	"16631"	"16606"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.9"	""	"23.3"	""	"26.6"	""	"52.8"	""	"40.3"	"31.7"	""	"1182"	"36"	"37.000"	"30.000"	"0.0148794706430548"	"21"	"0"	"0.0008189"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIQVQHPAAK"	"[R].eIqVQHPAAk.[S]"	"N-Term(TMT6plex); Q3(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"3"	"3"	"0.5517"	"0.0000"	"1"	"1"	"1"	"527.31171"	"1579.92057"	"1579.92081"	"-0.16"	"-0.00008"	"9/86"	"9"	"86"	"2819608.62469482"	"HCD"	"MS2"	"37.54191"	"99.8"	"100.000"	"39.6017"	"11108"	"11108"	"11080"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"142.8"	""	"120.1"	""	"124.0"	""	"167.3"	""	"189.3"	"203.3"	""	"759"	"29"	"35.000"	"28.000"	"0.0532367800881263"	"16"	"0.0003538"	"0.006577"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGAEGGEGFVVK"	"[M].mLGAEGGEGFVVk.[V]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"790.91345"	"1580.81963"	"1580.81916"	"0.30"	"0.00023"	"8/102"	"8"	"102"	"81493.5827636719"	"HCD"	"MS2"	"9.388866"	"2.1"	"100.000"	"96.7439"	"33924"	"33924"	"33915"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.5"	""	"3.5"	""	"3.1"	""	"3.6"	""	"5.0"	"2.7"	""	"972"	"22"	"36.000"	"29.000"	"0.298975960136996"	"15"	"0.0001301"	"0.004853"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGAEGGEGFVVK"	"[M].mLGAEGGEGFVVk.[V]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"790.91364"	"1580.81999"	"1580.81916"	"0.53"	"0.00042"	"5/102"	"5"	"102"	"78194.4757080078"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"96.7686"	"33954"	"33954"	"33940"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.5"	""	"2.5"	""	"2.1"	""	"8.8"	""	"4.9"	"6.0"	""	"985"	"33"	"36.000"	"29.000"	"0.0242888098447806"	"22"	"0"	"0.002509"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGAEGGEGFVVK"	"[M].mLGAEGGEGFVVk.[V]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"790.91400"	"1580.82073"	"1580.81916"	"0.99"	"0.00078"	"5/102"	"5"	"102"	"86769.525390625"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"97.0011"	"34014"	"34014"	"34010"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.5"	""	"3.4"	""	"3.8"	""	"5.5"	""	"4.9"	"3.0"	""	"980"	"25"	"36.000"	"29.000"	"0.142625138785264"	"17"	"0.0001301"	"0.004208"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGTDSQIFISR"	"[K].dLGTDSQIFISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.8730"	"0.0000"	"1"	"1"	"1"	"527.62030"	"1580.84635"	"1580.84815"	"-1.14"	"-0.00060"	"13/118"	"13"	"118"	"452385.838623047"	"HCD"	"MS2"	"8.99683"	"8.5"	"100.000"	"84.3570"	"29219"	"29219"	"29203"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.2"	""	"8.1"	""	"13.5"	""	"15.3"	""	"15.0"	"18.5"	""	"1064"	"63"	"37.000"	"30.000"	"2.43170916875114E-05"	"25"	"0"	"1.132E-05"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGTDSQIFISR"	"[K].dLGTDSQIFISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"790.92688"	"1580.84648"	"1580.84815"	"-1.06"	"-0.00083"	"5/118"	"5"	"118"	"102257.184509277"	"HCD"	"MS2"	"20.78136"	"5.5"	"100.000"	"84.0335"	"29090"	"29090"	"29069"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.6"	""	"5.9"	""	"7.0"	""	"7.2"	""	"12.8"	"11.0"	""	"1077"	"23"	"37.000"	"30.000"	"0.246709405995776"	"20"	"0.002379"	"0.02452"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGTDSQIFISR"	"[K].dLGTDSQIFISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"527.62054"	"1580.84708"	"1580.84815"	"-0.68"	"-0.00036"	"12/118"	"12"	"118"	"535444.993408203"	"HCD"	"MS2"	"15.61458"	"9.6"	"100.000"	"84.3109"	"29200"	"29200"	"29185"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.3"	""	"10.7"	""	"14.7"	""	"12.7"	""	"20.7"	"19.0"	""	"1053"	"60"	"37.000"	"30.000"	"5.70687520232164E-05"	"24"	"0"	"2.422E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGTDSQIFISR"	"[K].dLGTDSQIFISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"790.92731"	"1580.84734"	"1580.84815"	"-0.52"	"-0.00041"	"10/118"	"10"	"118"	"563184.679016113"	"HCD"	"MS2"	"0"	"29.1"	"100.000"	"84.3225"	"29205"	"29205"	"29196"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.3"	""	"32.5"	""	"42.1"	""	"52.6"	""	"52.9"	"50.4"	""	"1053"	"60"	"37.000"	"30.000"	"4.95904872569276E-05"	"26"	"0"	"2.292E-06"	"1.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGTDSQIFISR"	"[K].dLGTDSQIFISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.8525"	"0.0000"	"1"	"1"	"1"	"790.92773"	"1580.84819"	"1580.84815"	"0.03"	"0.00002"	"10/118"	"10"	"118"	"576404.499328613"	"HCD"	"MS2"	"0"	"31.2"	"100.000"	"84.3177"	"29204"	"29204"	"29190"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.6"	""	"38.2"	""	"50.5"	""	"51.6"	""	"51.4"	"55.1"	""	"1068"	"61"	"37.000"	"30.000"	"3.78914528092449E-05"	"25"	"0"	"1.41E-05"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVQEQGTHPK"	"[K].vVQEQGTHPk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.9245"	"0.0000"	"1"	"1"	"1"	"527.64282"	"1580.91391"	"1580.91606"	"-1.36"	"-0.00072"	"8/92"	"8"	"92"	"4325000.02374268"	"HCD"	"MS2"	"9.617179"	"119.1"	"100.000"	"26.6312"	"5851"	"5851"	"5825"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"153.1"	""	"186.4"	""	"174.0"	""	"198.5"	"2.2"	"216.5"	"197.1"	""	"816"	"53"	"36.000"	"29.000"	"0.000207806995391336"	"20"	"0"	"6.578E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVQEQGTHPK"	"[K].vVQEQGTHPk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"527.64337"	"1580.91556"	"1580.91606"	"-0.32"	"-0.00017"	"8/92"	"8"	"92"	"4628809.78088379"	"HCD"	"MS2"	"25.2753"	"124.7"	"100.000"	"26.7007"	"5863"	"5863"	"5840"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"158.6"	""	"175.7"	""	"184.3"	""	"217.9"	""	"233.7"	"218.6"	""	"817"	"48"	"36.000"	"29.000"	"0.000677941251688244"	"19"	"0"	"4.02E-05"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NTYLEWEDNALGR"	"[R].NTYLEWEDnALGR.[H]"	"N9(Deamidated)"	"1"	"1"	"Q9QX05"	"Toll-like receptor 4 OS=Rattus norvegicus OX=10116 GN=Tlr4 PE=2 SV=1"	"Q9QX05"	"Toll-like receptor 4 OS=Rattus norvegicus OX=10116 GN=Tlr4 PE=2 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"396.18350"	"1581.71218"	"1581.71798"	"-3.67"	"-0.00145"	"4/132"	"4"	"132"	"1177771.29547119"	"HCD"	"MS2"	"13.35311"	"29.6"	"100.000"	"60.5373"	"19585"	"19585"	"19568"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.2"	""	"28.8"	""	"35.4"	""	"53.8"	""	"68.9"	"59.1"	"NoQuanLabels"	"255"	"2"	"31.000"	"24.000"	"7.3707246044229"	"13"	"0.007147"	"0.08242"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NTYLEWEDNALGR"	"[R].NTYLEWEDnALGR.[H]"	"N9(Deamidated)"	"1"	"1"	"Q9QX05"	"Toll-like receptor 4 OS=Rattus norvegicus OX=10116 GN=Tlr4 PE=2 SV=1"	"Q9QX05"	"Toll-like receptor 4 OS=Rattus norvegicus OX=10116 GN=Tlr4 PE=2 SV=1"	"0"	"4"	"4"	"0.6667"	"0.0000"	"1"	"1"	"1"	"396.18372"	"1581.71303"	"1581.71798"	"-3.13"	"-0.00124"	"4/132"	"4"	"132"	"1875102.56500244"	"HCD"	"MS2"	"0"	"37.8"	"100.000"	"60.2370"	"19470"	"19470"	"19463"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.7"	""	"41.4"	""	"44.4"	""	"73.0"	"0.3"	"80.1"	"72.7"	"NoQuanLabels"	"260"	"3"	"31.000"	"24.000"	"6.27976442651705"	"13"	"0.005309"	"0.05974"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMQNTSDLDTAR"	"[R].tMQNTSDLDTAR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"791.38989"	"1581.77251"	"1581.77400"	"-0.94"	"-0.00075"	"9/124"	"9"	"124"	"270086.358520508"	"HCD"	"MS2"	"0"	"17.5"	"100.000"	"38.1233"	"10505"	"10505"	"10475"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.9"	""	"19.7"	""	"23.9"	""	"28.0"	""	"30.7"	"31.7"	""	"641"	"37"	"35.000"	"28.000"	"0.00665009782344299"	"20"	"0"	"0.0008423"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMQNTSDLDTAR"	"[R].tMQNTSDLDTAR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"791.39172"	"1581.77617"	"1581.77400"	"1.37"	"0.00108"	"7/124"	"7"	"124"	"229936.03717041"	"HCD"	"MS2"	"0"	"15.9"	"100.000"	"38.3195"	"10577"	"10577"	"10546"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.9"	""	"19.8"	""	"21.2"	""	"24.8"	""	"36.0"	"23.5"	""	"681"	"34"	"35.000"	"28.000"	"0.012975291286558"	"23"	"0"	"0.001877"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISQEQMQEFR"	"[K].gISQEQMQEFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"791.39734"	"1581.78740"	"1581.78926"	"-1.17"	"-0.00093"	"10/106"	"10"	"106"	"1162038.60882568"	"HCD"	"MS2"	"14.40222"	"76.2"	"100.000"	"59.7298"	"19289"	"19289"	"19270"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"111.9"	""	"82.6"	""	"82.4"	""	"104.1"	"0.9"	"168.9"	"173.3"	""	"792"	"55"	"35.000"	"28.000"	"0.000118221151709151"	"23"	"0"	"8.513E-06"	"0.918"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISQEQMQEFR"	"[K].gISQEQMQEFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"791.39764"	"1581.78801"	"1581.78926"	"-0.79"	"-0.00062"	"10/106"	"10"	"106"	"1317126.42108154"	"HCD"	"MS2"	"40.56379"	"84.8"	"100.000"	"59.4701"	"19198"	"19198"	"19174"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"129.3"	""	"89.0"	""	"89.0"	""	"112.4"	""	"191.5"	"195.7"	""	"806"	"57"	"36.000"	"29.000"	"7.85787373702493E-05"	"23"	"0"	"9.223E-06"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTDTDFDGVEVR"	"[K].vTDTDFDGVEVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"791.40100"	"1581.79473"	"1581.79578"	"-0.67"	"-0.00053"	"10/104"	"10"	"104"	"300351.696166992"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"74.5383"	"25289"	"25289"	"25271"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.8"	""	"22.4"	""	"22.0"	""	"27.1"	"0.7"	"29.3"	"29.8"	""	"821"	"48"	"36.000"	"29.000"	"0.000656618570746321"	"17"	"0"	"1.778E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTDTDFDGVEVR"	"[K].vTDTDFDGVEVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"791.40112"	"1581.79497"	"1581.79578"	"-0.51"	"-0.00041"	"10/104"	"10"	"104"	"171887.315124512"	"HCD"	"MS2"	"0"	"11.3"	"100.000"	"74.3481"	"25199"	"25199"	"25173"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.1"	""	"15.3"	""	"14.9"	""	"20.6"	""	"21.7"	"20.6"	""	"821"	"20"	"36.000"	"29.000"	"0.398394341554273"	"22"	"0.005309"	"0.05952"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTDTDFDGVEVR"	"[K].vTDTDFDGVEVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"0"	"2"	"2"	"0.8953"	"0.0000"	"1"	"1"	"1"	"791.40149"	"1581.79570"	"1581.79578"	"-0.05"	"-0.00004"	"10/104"	"10"	"104"	"399150.269958496"	"HCD"	"MS2"	"0"	"22.4"	"100.000"	"74.6481"	"25320"	"25320"	"25301"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.2"	""	"25.9"	""	"28.5"	""	"40.8"	""	"38.4"	"42.3"	""	"835"	"86"	"36.000"	"29.000"	"1.12630621304576E-07"	"27"	"0"	"2.215E-06"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTDTDFDGVEVR"	"[K].vTDTDFDGVEVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"791.40210"	"1581.79692"	"1581.79578"	"0.72"	"0.00057"	"9/104"	"9"	"104"	"293202.141418457"	"HCD"	"MS2"	"0"	"17.6"	"100.000"	"74.2248"	"25162"	"25162"	"25137"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.1"	""	"19.8"	""	"24.8"	""	"30.5"	""	"31.3"	"32.5"	""	"834"	"54"	"36.000"	"29.000"	"0.000169097059281976"	"24"	"0"	"1.33E-05"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGHLSLQDNR"	"[R].dPTGHLSLQDNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.94397"	"1581.81736"	"1581.81825"	"-0.56"	"-0.00030"	"10/112"	"10"	"112"	"1356051.77124023"	"HCD"	"MS2"	"40.35286"	"39.3"	"100.000"	"42.5966"	"12328"	"12328"	"12298"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.8"	""	"44.0"	""	"51.6"	""	"73.1"	""	"79.9"	"75.1"	""	"928"	"14"	"36.000"	"29.000"	"1.80516947277346"	"13"	"0"	"0.001495"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASGSSVTSLEGTR"	"[R].tASGSSVTSLEGTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6JE36"	"Protein NDRG1 OS=Rattus norvegicus OX=10116 GN=Ndrg1 PE=1 SV=1"	"Q6JE36"	"Protein NDRG1 OS=Rattus norvegicus OX=10116 GN=Ndrg1 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"3"	"791.41833"	"1581.82939"	"1581.82814"	"0.79"	"0.00062"	"6/128"	"6"	"128"	"292014.506225586"	"HCD"	"MS2"	"61.45068"	"16.6"	"100.000"	"41.7002"	"11951"	"11951"	"11926"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.2"	""	"18.4"	""	"20.5"	""	"28.0"	""	"35.9"	"37.6"	""	"966"	"8"	"36.000"	"29.000"	"7.70809628115342"	"16"	"0.007602"	"0.09011"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTTSLNQAALYR"	"[R].dTTSLNQAALYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"791.42468"	"1581.84209"	"1581.84340"	"-0.83"	"-0.00066"	"9/106"	"9"	"106"	"1181251.56176758"	"HCD"	"MS2"	"32.78182"	"75.5"	"100.000"	"59.6517"	"19257"	"19257"	"19238"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"122.0"	""	"83.6"	""	"84.2"	""	"111.0"	""	"153.9"	"163.6"	""	"1002"	"37"	"36.000"	"30.000"	"0.0097687214447878"	"15"	"0"	"1.968E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTTSLNQAALYR"	"[R].dTTSLNQAALYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"791.42554"	"1581.84380"	"1581.84340"	"0.25"	"0.00020"	"10/106"	"10"	"106"	"1167844.59094238"	"HCD"	"MS2"	"30.46438"	"79.2"	"100.000"	"59.4289"	"19181"	"19181"	"19158"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"129.9"	""	"87.2"	""	"76.3"	""	"114.4"	""	"166.9"	"178.3"	""	"1021"	"34"	"37.000"	"30.000"	"0.0228031973793067"	"19"	"0"	"5.871E-05"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIAPDSGGLPER"	"[K].iQIAPDSGGLPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9661"	"0.0000"	"1"	"1"	"1"	"791.44238"	"1581.87749"	"1581.87979"	"-1.45"	"-0.00115"	"15/130"	"15"	"130"	"618344.444213867"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"72.2067"	"24342"	"24342"	"24325"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.5"	""	"33.6"	""	"32.8"	"1.6"	"49.5"	"0.5"	"40.4"	"49.7"	""	"928"	"59"	"36.000"	"29.000"	"6.18753944523782E-05"	"18"	"0"	"3.28E-05"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLEEVPSALPR"	"[K].nQLEEVPSALPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"3"	"3"	"0.5882"	"0.0000"	"1"	"1"	"1"	"527.96417"	"1581.87796"	"1581.87979"	"-1.15"	"-0.00061"	"13/118"	"13"	"118"	"2286894.07696533"	"HCD"	"MS2"	"39.69942"	"33.0"	"100.000"	"71.4784"	"24045"	"24045"	"24026"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.7"	""	"37.4"	""	"31.1"	""	"79.2"	""	"53.8"	"76.5"	""	"925"	"17"	"36.000"	"29.000"	"1.00025731722375"	"20"	"0"	"0.000258"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLEEVPSALPR"	"[K].nQLEEVPSALPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.5778"	"0.0000"	"1"	"1"	"1"	"791.44263"	"1581.87798"	"1581.87979"	"-1.14"	"-0.00090"	"10/118"	"10"	"118"	"614331.320861816"	"HCD"	"MS2"	"3.513972"	"30.4"	"100.000"	"71.9052"	"24218"	"24218"	"24198"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.5"	""	"18.5"	""	"22.8"	""	"69.9"	""	"75.3"	"88.2"	""	"925"	"45"	"36.000"	"29.000"	"0.00160735474667483"	""	"0"	"0.0004114"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLEEVPSALPR"	"[K].nQLEEVPSALPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"791.44281"	"1581.87834"	"1581.87979"	"-0.91"	"-0.00072"	"11/118"	"11"	"118"	"1541910.42059326"	"HCD"	"MS2"	"0"	"66.9"	"100.000"	"71.7405"	"24138"	"24138"	"24120"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.8"	""	"34.0"	""	"39.8"	""	"174.6"	"0.4"	"182.0"	"169.8"	""	"929"	"66"	"36.000"	"29.000"	"1.09140444528404E-05"	""	"0"	"2.629E-07"	"1.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLEEVPSALPR"	"[K].nQLEEVPSALPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"791.44305"	"1581.87883"	"1581.87979"	"-0.60"	"-0.00048"	"6/118"	"6"	"118"	"396553.63659668"	"HCD"	"MS2"	"3.159173"	"21.5"	"100.000"	"72.0633"	"24269"	"24269"	"24250"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.7"	""	"10.7"	""	"20.2"	""	"46.2"	"0.3"	"53.4"	"61.9"	""	"931"	"37"	"36.000"	"29.000"	"0.00997515574821388"	"21"	"0"	"0.0003309"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLEEVPSALPR"	"[K].nQLEEVPSALPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.7887"	"0.0000"	"1"	"1"	"1"	"791.44305"	"1581.87883"	"1581.87979"	"-0.60"	"-0.00048"	"11/118"	"11"	"118"	"1422012.36260986"	"HCD"	"MS2"	"3.498072"	"61.6"	"100.000"	"71.5987"	"24094"	"24094"	"24074"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.4"	""	"31.7"	""	"38.8"	""	"158.3"	""	"163.2"	"166.9"	""	"931"	"71"	"36.000"	"29.000"	"3.63847743035868E-06"	""	"0"	"7.755E-07"	"1.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLEEVPSALPR"	"[K].nQLEEVPSALPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"527.96448"	"1581.87888"	"1581.87979"	"-0.57"	"-0.00030"	"13/118"	"13"	"118"	"2321911.82208252"	"HCD"	"MS2"	"40.22175"	"35.5"	"100.000"	"71.5887"	"24076"	"24076"	"24056"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.0"	""	"35.2"	""	"40.2"	""	"87.0"	""	"56.7"	"77.7"	""	"931"	"16"	"36.000"	"29.000"	"1.11923088340323"	"18"	"0"	"0.0004641"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIAPDSGGLPER"	"[K].iQIAPDSGGLPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"791.44312"	"1581.87895"	"1581.87979"	"-0.53"	"-0.00042"	"9/130"	"9"	"130"	"131040.157592773"	"HCD"	"MS2"	"13.88488"	"8.8"	"100.000"	"72.5364"	"24476"	"24476"	"24452"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.8"	""	"10.2"	""	"8.0"	""	"15.9"	""	"15.6"	"18.3"	""	"931"	"13"	"36.000"	"29.000"	"2.26944512143126"	"14"	"0.0008629"	"0.01068"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLEEVPSALPR"	"[K].nQLEEVPSALPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"3"	"3"	"0.5263"	"0.0000"	"1"	"1"	"1"	"527.96454"	"1581.87906"	"1581.87979"	"-0.46"	"-0.00024"	"13/118"	"13"	"118"	"2051917.78881836"	"HCD"	"MS2"	"3.727687"	"17.0"	"100.000"	"71.7619"	"24160"	"24160"	"24145"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.0"	""	"15.3"	""	"12.4"	""	"34.6"	"1.3"	"44.2"	"41.1"	""	"922"	"38"	"36.000"	"29.000"	"0.0074421929469701"	""	"0"	"7.479E-05"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIAPDSGGLPER"	"[K].iQIAPDSGGLPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9773"	"0.0000"	"1"	"1"	"1"	"791.44324"	"1581.87920"	"1581.87979"	"-0.37"	"-0.00029"	"13/130"	"13"	"130"	"632222.258728027"	"HCD"	"MS2"	"0"	"25.5"	"100.000"	"72.3789"	"24398"	"24398"	"24378"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.7"	""	"28.6"	""	"29.3"	""	"49.7"	""	"46.0"	"49.1"	""	"943"	"44"	"36.000"	"29.000"	"0.00182172029680994"	"16"	"0"	"0.001217"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLEEVPSALPR"	"[K].nQLEEVPSALPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"527.96503"	"1581.88053"	"1581.87979"	"0.47"	"0.00025"	"13/118"	"13"	"118"	"1914832.86279297"	"HCD"	"MS2"	"4.032895"	"16.7"	"100.000"	"71.8811"	"24195"	"24195"	"24177"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.9"	""	"14.1"	""	"11.2"	""	"35.5"	""	"39.1"	"44.7"	""	"953"	"36"	"36.000"	"29.000"	"0.0125044013592269"	"29"	"0"	"6.766E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTIADPHNLK"	"[K].dTIADPHNLk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B2RYW9"	"Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Fahd2 PE=1 SV=1"	"B2RYW9"	"Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Fahd2 PE=1 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"527.97107"	"1581.89865"	"1581.90008"	"-0.90"	"-0.00047"	"10/84"	"10"	"84"	"1941278.2677002"	"HCD"	"MS2"	"29.64501"	"62.3"	"100.000"	"48.0476"	"14542"	"14542"	"14518"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.0"	""	"78.4"	""	"93.3"	""	"96.1"	""	"117.7"	"118.4"	""	"825"	"23"	"36.000"	"29.000"	"0.214005016058196"	"16"	"0.0002479"	"0.005606"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHQLDIDNPQSIR"	"[R].FHQLDIDNPQSIR.[A]"	""	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"3"	"3"	"0.5385"	"0.0000"	"1"	"1"	"1"	"528.27087"	"1582.79807"	"1582.79723"	"0.53"	"0.00028"	"11/128"	"11"	"128"	"813685.335021973"	"HCD"	"MS2"	"42.97947"	"25.0"	"100.000"	"51.9438"	"16119"	"16119"	"16091"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.7"	""	"29.6"	""	"21.6"	""	"45.8"	"0.9"	"54.7"	"50.0"	"NoQuanLabels"	"810"	"26"	"36.000"	"29.000"	"0.100566890764471"	"26"	"0.004942"	"0.05462"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSGTMNLGGSLTR"	"[K].sGSGTmNLGGSLTR.[Q]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"791.90552"	"1582.80376"	"1582.80564"	"-1.19"	"-0.00094"	"8/142"	"8"	"142"	"306113.127868652"	"HCD"	"MS2"	"100"	"18.4"	"100.000"	"39.3130"	"10981"	"10981"	"10956"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.6"	""	"25.0"	""	"33.2"	""	"38.3"	""	"31.6"	"22.8"	""	"843"	"26"	"36.000"	"29.000"	"0.105147167740645"	"14"	"0.0006732"	"0.008356"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSGTMNLGGSLTR"	"[K].sGSGTmNLGGSLTR.[Q]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.9861"	"0.0000"	"1"	"1"	"1"	"791.90631"	"1582.80535"	"1582.80564"	"-0.18"	"-0.00015"	"11/142"	"11"	"142"	"634799.120849609"	"HCD"	"MS2"	"0"	"28.7"	"100.000"	"39.1513"	"10924"	"10924"	"10899"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.7"	""	"42.9"	""	"44.5"	""	"65.0"	""	"40.1"	"38.9"	""	"857"	"72"	"36.000"	"29.000"	"2.99192585147067E-06"	"18"	"0"	"0.0001138"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYSLQENTSGLI"	"[R].eYSLQENTSGLI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"791.91193"	"1582.81658"	"1582.81618"	"0.25"	"0.00020"	"5/108"	"5"	"108"	"61593.0621337891"	"HCD"	"MS2"	"10.68243"	"1.6"	"100.000"	"101.2125"	"35368"	"35368"	"35356"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.0"	""	"2.4"	""	"2.9"	""	"4.6"	""	""	"2.3"	""	"886"	"26"	"36.000"	"29.000"	"0.115718747999885"	"18"	"0.0001301"	"0.003848"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPDTFMEQK"	"[R].ePDTFMEQk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"791.91278"	"1582.81828"	"1582.81872"	"-0.27"	"-0.00022"	"6/78"	"6"	"78"	"184791.483825684"	"HCD"	"MS2"	"0"	"18.2"	"100.000"	"65.4505"	"21589"	"21589"	"21563"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.2"	""	"16.7"	""	"23.8"	""	"23.6"	""	"38.9"	"38.1"	""	"908"	"35"	"36.000"	"29.000"	"0.0128545196609292"	"28"	"0.005309"	"0.05962"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYSLQENTSGLI"	"[R].eYSLQENTSGLI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"791.91290"	"1582.81853"	"1582.81618"	"1.48"	"0.00117"	"6/108"	"6"	"108"	"80904.4504394531"	"HCD"	"MS2"	"0"	"1.9"	"100.000"	"101.1758"	"35401"	"35401"	"35394"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.1"	""	""	""	"2.4"	""	"5.6"	""	"3.6"	"3.9"	""	"912"	"27"	"36.000"	"29.000"	"0.0995324839800408"	"18"	"0.0023"	"0.02295"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAGTLYTYPENWR"	"[M].aAGTLYTYPENWR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"792.37762"	"1583.74797"	"1583.74888"	"-0.58"	"-0.00046"	"4/112"	"4"	"112"	"148068.621582031"	"HCD"	"MS2"	"16.02202"	"0.7"	"100.000"	"104.4970"	"36321"	"36321"	"36315"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	""	""	""	""	"2.0"	"4.5"	"NoQuanLabels"	"497"	"20"	"33.000"	"26.000"	"0.230848147114814"	"14"	"0.0006732"	"0.008781"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAGTLYTYPENWR"	"[M].aAGTLYTYPENWR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"792.37799"	"1583.74870"	"1583.74888"	"-0.11"	"-0.00009"	"5/112"	"5"	"112"	"257099.44708252"	"HCD"	"MS2"	"10.29882"	"0.2"	"100.000"	"105.0181"	"36486"	"36486"	"36481"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.4"	""	""	""	""	""	""	""	""	""	"NoQuanLabels"	"506"	"37"	"34.000"	"27.000"	"0.00474373610541056"	"15"	"0"	"0.001359"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAGTLYTYPENWR"	"[M].aAGTLYTYPENWR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.9844"	"0.0000"	"1"	"1"	"1"	"792.37805"	"1583.74883"	"1583.74888"	"-0.04"	"-0.00003"	"9/112"	"9"	"112"	"1949081.2911377"	"HCD"	"MS2"	"0"	"1.0"	"100.000"	"104.7152"	"36454"	"36454"	"36447"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.4"	""	"2.0"	""	""	""	"2.5"	""	""	"2.8"	"NoQuanLabels"	"508"	"64"	"34.000"	"27.000"	"1.01352325199984E-05"	"17"	"0"	"7.228E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAGTLYTYPENWR"	"[M].aAGTLYTYPENWR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.9437"	"0.0000"	"1"	"1"	"1"	"792.37817"	"1583.74907"	"1583.74888"	"0.12"	"0.00009"	"9/112"	"9"	"112"	"1878574.50561523"	"HCD"	"MS2"	"0"	""	"100.000"	"104.7541"	"36402"	"36402"	"36398"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	""	""	""	""	""	""	"NoQuanLabels"	"508"	"71"	"34.000"	"27.000"	"1.93568068546454E-06"	"21"	"0"	"3.704E-05"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAGTLYTYPENWR"	"[M].aAGTLYTYPENWR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"792.37823"	"1583.74919"	"1583.74888"	"0.20"	"0.00015"	"7/112"	"7"	"112"	"287749.784301758"	"HCD"	"MS2"	"5.352062"	"1.2"	"100.000"	"104.9755"	"36541"	"36541"	"36536"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	"2.3"	""	""	""	"3.6"	""	"2.6"	"3.4"	"NoQuanLabels"	"512"	"44"	"34.000"	"27.000"	"0.00102150375004708"	"16"	"0"	"0.0009043"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISQEQMNEFR"	"[K].gISQEQmNEFR.[A]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"792.38702"	"1583.76677"	"1583.76852"	"-1.11"	"-0.00088"	"7/106"	"7"	"106"	"265202.663208008"	"HCD"	"MS2"	"0"	"17.5"	"100.000"	"41.9693"	"12061"	"12061"	"12033"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.6"	""	"16.1"	""	"16.6"	""	"35.8"	""	"38.8"	"40.2"	""	"628"	"32"	"34.000"	"27.000"	"0.0179031581496155"	"15"	"0"	"0.003167"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISQEQMNEFR"	"[K].gISQEQmNEFR.[A]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"792.38788"	"1583.76848"	"1583.76852"	"-0.03"	"-0.00002"	"8/106"	"8"	"106"	"246419.190856934"	"HCD"	"MS2"	"0"	"16.1"	"100.000"	"41.7917"	"11999"	"11999"	"11969"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.2"	""	"15.7"	""	"14.3"	""	"35.3"	""	"37.3"	"31.7"	""	"638"	"37"	"35.000"	"28.000"	"0.00675757202144272"	"22"	"0"	"0.001806"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAMEMVLTGDR"	"[K].sLAmEmVLTGDR.[I]"	"N-Term(TMT6plex); M4(Oxidation); M6(Oxidation)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"528.60370"	"1583.79654"	"1583.79705"	"-0.32"	"-0.00017"	"8/108"	"8"	"108"	"604272.940490723"	"HCD"	"MS2"	"56.10124"	"17.2"	"100.000"	"57.7818"	"18494"	"18494"	"18466"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.3"	""	"13.3"	""	"25.3"	""	"34.9"	""	"35.7"	"36.3"	""	"811"	"26"	"36.000"	"29.000"	"0.0937542272416204"	"21"	"0"	"0.0003526"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAMEMVLTGDR"	"[K].sLAmEmVLTGDR.[I]"	"N-Term(TMT6plex); M4(Oxidation); M6(Oxidation)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"528.60376"	"1583.79673"	"1583.79705"	"-0.20"	"-0.00011"	"10/108"	"10"	"108"	"657777.539611816"	"HCD"	"MS2"	"46.70078"	"18.7"	"100.000"	"57.6001"	"18435"	"18435"	"18408"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.8"	""	"14.4"	""	"24.2"	""	"39.5"	""	"36.2"	"40.8"	""	"817"	"29"	"36.000"	"29.000"	"0.0545999268509222"	"23"	"0"	"0.0002488"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAMEMVLTGDR"	"[K].sLAmEmVLTGDR.[I]"	"N-Term(TMT6plex); M4(Oxidation); M6(Oxidation)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"792.40210"	"1583.79692"	"1583.79705"	"-0.08"	"-0.00006"	"11/108"	"11"	"108"	"281731.306396484"	"HCD"	"MS2"	"16.64792"	"18.3"	"100.000"	"57.1786"	"18263"	"18263"	"18237"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.0"	""	"14.7"	"2.3"	"16.5"	""	"52.0"	""	"32.7"	"35.3"	""	"819"	"14"	"36.000"	"29.000"	"1.69142952064971"	"14"	"0.003922"	"0.03997"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAMEMVLTGDR"	"[K].sLAmEmVLTGDR.[I]"	"N-Term(TMT6plex); M4(Oxidation); M6(Oxidation)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"528.60394"	"1583.79728"	"1583.79705"	"0.15"	"0.00008"	"11/108"	"11"	"108"	"585154.024047852"	"HCD"	"MS2"	"50.31201"	"18.3"	"100.000"	"57.9341"	"18571"	"18571"	"18543"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.1"	""	"17.3"	""	"44.1"	""	"29.2"	""	"32.4"	"32.4"	""	"825"	"23"	"36.000"	"29.000"	"0.221525616002729"	"16"	"0"	"0.001275"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAMEMVLTGDR"	"[K].sLAmEmVLTGDR.[I]"	"N-Term(TMT6plex); M4(Oxidation); M6(Oxidation)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"792.40234"	"1583.79741"	"1583.79705"	"0.23"	"0.00018"	"9/108"	"9"	"108"	"607316.659545898"	"HCD"	"MS2"	"6.546599"	"28.1"	"100.000"	"57.7266"	"18471"	"18471"	"18454"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.5"	""	"23.9"	""	"23.8"	""	"96.6"	""	"54.0"	"47.3"	""	"825"	"36"	"36.000"	"29.000"	"0.0102429240593442"	"18"	"0.000936"	"0.01165"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAMEMVLTGDR"	"[K].sLAmEmVLTGDR.[I]"	"N-Term(TMT6plex); M4(Oxidation); M6(Oxidation)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"792.40247"	"1583.79766"	"1583.79705"	"0.38"	"0.00030"	"14/108"	"14"	"108"	"318896.53326416"	"HCD"	"MS2"	"0"	"18.3"	"100.000"	"57.4065"	"18341"	"18341"	"18323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.6"	""	"17.8"	""	"20.8"	""	"54.0"	""	"38.3"	"26.8"	""	"823"	"22"	"36.000"	"29.000"	"0.25844601465168"	"16"	"0.003507"	"0.03598"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAMEMVLTGDR"	"[K].sLAmEmVLTGDR.[I]"	"N-Term(TMT6plex); M4(Oxidation); M6(Oxidation)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"792.40259"	"1583.79790"	"1583.79705"	"0.54"	"0.00043"	"11/108"	"11"	"108"	"620489.601074219"	"HCD"	"MS2"	"8.240345"	"31.2"	"100.000"	"57.5126"	"18399"	"18399"	"18377"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.4"	""	"28.0"	""	"28.8"	""	"103.7"	"0.4"	"53.9"	"51.9"	""	"821"	"44"	"36.000"	"29.000"	"0.00154281254460406"	"19"	"0"	"0.002057"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDNELEK"	"[K].nYTDNELEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"792.41858"	"1583.82988"	"1583.83172"	"-1.16"	"-0.00092"	"8/90"	"8"	"90"	"932033.869689941"	"HCD"	"MS2"	"41.08134"	"98.8"	"100.000"	"51.6691"	"16018"	"16018"	"15989"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"166.7"	""	"101.5"	""	"112.5"	""	"172.3"	"0.6"	"195.0"	"187.7"	""	"923"	"38"	"36.000"	"29.000"	"0.0078554615162427"	"23"	"0"	"0.000419"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDNELEK"	"[K].nYTDNELEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"528.61493"	"1583.83023"	"1583.83172"	"-0.94"	"-0.00050"	"9/90"	"9"	"90"	"2971169.55444336"	"HCD"	"MS2"	"44.06133"	"91.4"	"100.000"	"51.7427"	"16048"	"16048"	"16021"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"139.3"	""	"99.9"	""	"102.6"	""	"159.0"	"2.6"	"185.5"	"177.9"	""	"920"	"33"	"36.000"	"29.000"	"0.0217649579122281"	"26"	"0.0002479"	"0.005092"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDNELEK"	"[K].nYTDNELEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.6552"	"0.0000"	"1"	"1"	"1"	"528.61511"	"1583.83078"	"1583.83172"	"-0.59"	"-0.00031"	"9/90"	"9"	"90"	"2649916.95251465"	"HCD"	"MS2"	"45.00089"	"84.1"	"100.000"	"52.0678"	"16169"	"16169"	"16147"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"143.3"	""	"84.5"	""	"100.4"	""	"142.3"	""	"165.0"	"162.4"	""	"923"	"29"	"36.000"	"29.000"	"0.0648890932385956"	"25"	"0.0002479"	"0.00567"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDNELEK"	"[K].nYTDNELEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"792.41907"	"1583.83086"	"1583.83172"	"-0.55"	"-0.00043"	"8/90"	"8"	"90"	"2183543.99084473"	"HCD"	"MS2"	"0"	"225.4"	"100.000"	"52.0586"	"16165"	"16165"	"16147"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"372.6"	""	"226.2"	""	"235.8"	""	"395.8"	""	"455.7"	"454.5"	""	"923"	"43"	"36.000"	"29.000"	"0.00234515582741699"	"23"	"0"	"0.000703"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDNELEK"	"[K].nYTDNELEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"792.41937"	"1583.83147"	"1583.83172"	"-0.16"	"-0.00013"	"8/90"	"8"	"90"	"2240182.64508057"	"HCD"	"MS2"	"0"	"220.8"	"100.000"	"52.3552"	"16286"	"16286"	"16272"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"331.6"	""	"210.0"	""	"238.3"	""	"378.7"	"0.6"	"449.5"	"487.3"	""	"944"	"46"	"36.000"	"29.000"	"0.00108378216190903"	"24"	"0"	"0.0007683"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDNELEK"	"[K].nYTDNELEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"792.41962"	"1583.83196"	"1583.83172"	"0.15"	"0.00012"	"8/90"	"8"	"90"	"3331554.62548828"	"HCD"	"MS2"	"0"	"308.5"	"100.000"	"51.9795"	"16144"	"16144"	"16126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"473.1"	""	"293.7"	""	"327.7"	""	"541.9"	""	"628.8"	"666.1"	""	"927"	"44"	"36.000"	"29.000"	"0.0017220657868654"	"24"	"0"	"0.0005597"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQISPDSGGLPER"	"[K].vQISPDSGGLPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"792.43256"	"1583.85784"	"1583.85905"	"-0.77"	"-0.00061"	"6/134"	"6"	"134"	"686061.819213867"	"HCD"	"MS2"	"0"	"35.6"	"100.000"	"62.4803"	"20369"	"20369"	"20351"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.1"	""	"39.5"	""	"46.9"	""	"56.1"	""	"78.7"	"67.9"	""	"977"	"36"	"36.000"	"29.000"	"0.0131784571274934"	"23"	"0.0002479"	"0.005099"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQISPDSGGLPER"	"[K].vQISPDSGGLPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"792.43286"	"1583.85845"	"1583.85905"	"-0.38"	"-0.00030"	"8/134"	"8"	"134"	"590477.118041992"	"HCD"	"MS2"	"0"	"33.2"	"100.000"	"62.6488"	"20454"	"20454"	"20433"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.0"	""	"37.3"	""	"36.9"	""	"54.0"	"1.5"	"73.6"	"61.9"	""	"980"	"52"	"36.000"	"29.000"	"0.000305630069386386"	"26"	"0"	"0.00039"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQISPDSGGLPER"	"[K].vQISPDSGGLPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"792.43323"	"1583.85918"	"1583.85905"	"0.08"	"0.00006"	"8/134"	"8"	"134"	"438189.129211426"	"HCD"	"MS2"	"10.70647"	"24.1"	"100.000"	"62.7955"	"20498"	"20498"	"20474"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.3"	""	"23.5"	""	"30.2"	""	"41.2"	""	"50.6"	"46.3"	""	"980"	"40"	"36.000"	"29.000"	"0.00437719687029315"	"25"	"0"	"0.0006836"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQISPDSGGLPER"	"[K].vQISPDSGGLPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"792.43481"	"1583.86235"	"1583.85905"	"2.08"	"0.00165"	"10/134"	"10"	"134"	"743402.235412598"	"HCD"	"MS2"	"36.94436"	"46.1"	"100.000"	"62.3222"	"20321"	"20321"	"20307"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.2"	""	"70.0"	""	"61.5"	""	"67.6"	"2.0"	"82.7"	"83.2"	""	"945"	"45"	"36.000"	"29.000"	"0.00143681817463204"	"25"	"0"	"0.0001665"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQETYETLK"	"[R].nQETYETLk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"792.43671"	"1583.86614"	"1583.86811"	"-1.24"	"-0.00099"	"8/88"	"8"	"88"	"550209.999694824"	"HCD"	"MS2"	"30.41017"	"53.4"	"100.000"	"51.6653"	"16005"	"16005"	"15979"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.7"	""	"48.8"	""	"58.4"	""	"90.4"	""	"136.1"	"110.4"	""	"929"	"45"	"36.000"	"29.000"	"0.0013182133887111"	"26"	"0"	"0.0002813"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQETYETLK"	"[R].nQETYETLk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"792.43774"	"1583.86821"	"1583.86811"	"0.07"	"0.00005"	"8/88"	"8"	"88"	"476820.153198242"	"HCD"	"MS2"	"43.14608"	"47.4"	"100.000"	"51.2730"	"15856"	"15856"	"15831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.5"	""	"48.8"	""	"44.9"	""	"76.8"	"0.3"	"130.7"	"93.4"	""	"955"	"48"	"36.000"	"29.000"	"0.00075157681778262"	"21"	"0"	"0.0001452"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYLEEELTK"	"[R].tYLEEELTk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P42335"	"Inositol-trisphosphate 3-kinase B OS=Rattus norvegicus OX=10116 GN=Itpkb PE=1 SV=3"	"P42335; P17105"	"Inositol-trisphosphate 3-kinase B OS=Rattus norvegicus OX=10116 GN=Itpkb PE=1 SV=3; Inositol-trisphosphate 3-kinase A OS=Rattus norvegicus OX=10116 GN=Itpka PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"792.45020"	"1583.89311"	"1583.89326"	"-0.09"	"-0.00007"	"5/78"	"5"	"78"	"104434.838989258"	"HCD"	"MS2"	"23.42397"	"11.2"	"100.000"	"83.1053"	"28726"	"28726"	"28705"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.7"	""	"8.6"	""	"14.4"	""	"13.3"	""	"26.7"	"25.8"	""	"846"	"14"	"36.000"	"29.000"	"1.859261033302"	"15"	"0.004069"	"0.04372"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYLEEELTK"	"[R].tYLEEELTk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P42335"	"Inositol-trisphosphate 3-kinase B OS=Rattus norvegicus OX=10116 GN=Itpkb PE=1 SV=3"	"P42335; P17105"	"Inositol-trisphosphate 3-kinase B OS=Rattus norvegicus OX=10116 GN=Itpkb PE=1 SV=3; Inositol-trisphosphate 3-kinase A OS=Rattus norvegicus OX=10116 GN=Itpka PE=1 SV=3"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"792.45099"	"1583.89470"	"1583.89326"	"0.91"	"0.00072"	"10/78"	"10"	"78"	"127911.443725586"	"HCD"	"MS2"	"19.66729"	"12.8"	"100.000"	"83.1640"	"28750"	"28750"	"28733"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.8"	""	"16.1"	""	"16.3"	""	"27.1"	""	"23.1"	"24.0"	""	"840"	"32"	"36.000"	"29.000"	"0.0250754820365211"	"22"	"0.0002479"	"0.005376"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEAEAAHGTVTR"	"[K].tIEAEAAHGTVTR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"0.8539"	"0.0000"	"1"	"1"	"1"	"528.95593"	"1584.85324"	"1584.85430"	"-0.67"	"-0.00035"	"11/118"	"11"	"118"	"8862922.15545654"	"HCD"	"MS2"	"10.8654"	"108.2"	"100.000"	"31.9825"	"8019"	"8019"	"7999"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"125.2"	""	"136.1"	""	"140.0"	""	"199.1"	"4.1"	"210.3"	"211.9"	""	"912"	"89"	"36.000"	"29.000"	"6.42635692080374E-08"	""	"0"	"9.929E-08"	"1.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEAEAAHGTVTR"	"[K].tIEAEAAHGTVTR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"0.8415"	"0.0000"	"1"	"1"	"1"	"528.95593"	"1584.85324"	"1584.85430"	"-0.67"	"-0.00035"	"11/118"	"11"	"118"	"7944155.74822998"	"HCD"	"MS2"	"6.867532"	"106.3"	"100.000"	"31.9830"	"8011"	"8011"	"7993"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"115.2"	""	"131.1"	""	"128.4"	""	"213.7"	"1.7"	"202.5"	"216.3"	""	"912"	"82"	"36.000"	"29.000"	"3.01970725688003E-07"	""	"0"	"1.912E-07"	"1.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDLPADTVEGLR"	"[R].gIDLPADTVEGLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"792.94318"	"1584.87908"	"1584.87945"	"-0.24"	"-0.00019"	"6/110"	"6"	"110"	"301265.000305176"	"HCD"	"MS2"	"0"	"15.0"	"100.000"	"92.5855"	"32410"	"32410"	"32402"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.0"	""	"9.2"	""	"9.8"	""	"16.0"	""	"17.4"	"74.3"	""	"883"	"38"	"36.000"	"29.000"	"0.00669777737233297"	"27"	"0"	"0.001556"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDLPADTVEGLR"	"[R].gIDLPADTVEGLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"792.94324"	"1584.87920"	"1584.87945"	"-0.16"	"-0.00013"	"7/110"	"7"	"110"	"211513.849914551"	"HCD"	"MS2"	"0"	"10.6"	"100.000"	"92.3143"	"32305"	"32305"	"32292"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.2"	""	"5.9"	""	"7.9"	""	"10.6"	"0.8"	"12.1"	"49.3"	""	"885"	"36"	"36.000"	"29.000"	"0.0109878639909329"	"27"	"0"	"0.00155"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDLPADTVEGLR"	"[R].gIDLPADTVEGLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"2"	"2"	"0.5517"	"0.0000"	"1"	"1"	"1"	"792.94324"	"1584.87920"	"1584.87945"	"-0.16"	"-0.00013"	"11/110"	"11"	"110"	"313999.391906738"	"HCD"	"MS2"	"0"	"14.0"	"100.000"	"92.6472"	"32446"	"32446"	"32428"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.6"	""	"8.3"	""	"9.0"	""	"8.7"	"1.9"	"20.0"	"72.5"	""	"885"	"29"	"36.000"	"29.000"	"0.052591223564088"	"28"	"0"	"0.003332"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDLPADTVEGLR"	"[R].gIDLPADTVEGLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"792.94391"	"1584.88054"	"1584.87945"	"0.69"	"0.00054"	"13/110"	"13"	"110"	"275940.428466797"	"HCD"	"MS2"	"5.694763"	"14.0"	"100.000"	"92.3510"	"32329"	"32329"	"32317"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.8"	""	"7.2"	""	"12.2"	""	"10.2"	""	"19.1"	"66.2"	""	"874"	"30"	"36.000"	"29.000"	"0.0404093102011003"	"28"	"0"	"0.00277"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSAVDPEPQVK"	"[K].gSAVDPEPQVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"792.95300"	"1584.89873"	"1584.89974"	"-0.64"	"-0.00051"	"7/94"	"7"	"94"	"579149.391601563"	"HCD"	"MS2"	"0"	"39.5"	"100.000"	"47.3307"	"14250"	"14250"	"14222"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.0"	""	"56.8"	""	"63.3"	""	"51.8"	""	"89.0"	"61.2"	""	"797"	"27"	"36.000"	"29.000"	"0.0871823007143896"	"23"	"0"	"0.001154"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSAVDPEPQVK"	"[K].gSAVDPEPQVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"792.95325"	"1584.89922"	"1584.89974"	"-0.33"	"-0.00026"	"14/94"	"14"	"94"	"642009.292419434"	"HCD"	"MS2"	"0"	"45.4"	"100.000"	"47.5671"	"14335"	"14335"	"14305"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"69.0"	""	"62.6"	""	"67.1"	""	"64.3"	""	"92.2"	"77.8"	""	"794"	"31"	"35.000"	"28.000"	"0.0301155297286586"	"22"	"0"	"0.0003689"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"0.7451"	"0.0000"	"1"	"1"	"1"	"528.97943"	"1584.92374"	"1584.92489"	"-0.73"	"-0.00038"	"12/86"	"12"	"86"	"1349888.34912109"	"HCD"	"MS2"	"7.068103"	"33.9"	"100.000"	"77.5106"	"26486"	"26486"	"26467"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.3"	""	"51.4"	""	"28.3"	""	"59.2"	"1.5"	"63.5"	"51.0"	""	"650"	"51"	"35.000"	"28.000"	"0.000231144391937332"	""	"0"	"0.0001727"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"3"	"792.96558"	"1584.92388"	"1584.92489"	"-0.64"	"-0.00051"	"4/86"	"4"	"86"	"98441.0604248047"	"HCD"	"MS2"	"54.17214"	"5.8"	"100.000"	"77.9976"	"26681"	"26681"	"26664"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.1"	""	"7.3"	""	"4.9"	""	"6.8"	""	"12.8"	"9.3"	""	"650"	"8"	"35.000"	"28.000"	"4.78501563290634"	"16"	"0.009594"	"0.1264"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"792.96558"	"1584.92388"	"1584.92489"	"-0.64"	"-0.00051"	"9/86"	"9"	"86"	"1878056.58416748"	"HCD"	"MS2"	"0"	"109.6"	"100.000"	"77.4254"	"26452"	"26452"	"26439"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"153.2"	""	"123.9"	""	"71.9"	""	"201.2"	""	"272.6"	"223.2"	""	"650"	"30"	"35.000"	"28.000"	"0.0328007187974922"	"22"	"0"	"0.001601"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"0.7400"	"0.0000"	"1"	"1"	"1"	"528.97949"	"1584.92392"	"1584.92489"	"-0.61"	"-0.00032"	"12/86"	"12"	"86"	"3645744.37310791"	"HCD"	"MS2"	"5.994108"	"78.4"	"100.000"	"76.9063"	"26240"	"26240"	"26223"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"176.4"	""	"124.2"	""	"45.3"	""	"146.4"	""	"152.6"	"100.4"	""	"650"	"50"	"35.000"	"28.000"	"0.00035800027560096"	"28"	"0"	"0.0001683"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"0.7255"	"0.0000"	"1"	"1"	"1"	"528.97961"	"1584.92429"	"1584.92489"	"-0.38"	"-0.00020"	"12/86"	"12"	"86"	"884962.209472656"	"HCD"	"MS2"	"19.50567"	"25.5"	"100.000"	"77.6758"	"26543"	"26543"	"26525"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.1"	""	"36.7"	""	"20.3"	""	"42.7"	"0.9"	"48.1"	"48.0"	""	"650"	"51"	"35.000"	"28.000"	"0.000279179394489254"	""	"0"	"0.0002039"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.7736"	"0.0000"	"1"	"1"	"1"	"792.96582"	"1584.92436"	"1584.92489"	"-0.33"	"-0.00027"	"9/86"	"9"	"86"	"333419.695922852"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"76.9100"	"26233"	"26233"	"26208"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.1"	""	"33.0"	""	"11.7"	""	"40.3"	""	"46.8"	"33.2"	""	"650"	"53"	"35.000"	"28.000"	"0.000179425167766246"	"28"	"0"	"5.329E-05"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"792.96582"	"1584.92436"	"1584.92489"	"-0.33"	"-0.00027"	"15/86"	"15"	"86"	"1633792.34997559"	"HCD"	"MS2"	"0"	"88.0"	"100.000"	"77.5190"	"26479"	"26479"	"26461"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"119.5"	""	"98.3"	""	"52.8"	""	"161.0"	""	"227.2"	"186.2"	""	"650"	"30"	"35.000"	"28.000"	"0.0331042201117588"	"21"	"0"	"0.003137"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"792.96582"	"1584.92436"	"1584.92489"	"-0.33"	"-0.00027"	"8/86"	"8"	"86"	"9260654.7199707"	"HCD"	"MS2"	"0"	"480.5"	"100.000"	"77.1347"	"26334"	"26334"	"26317"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1007.3"	""	"681.4"	""	"282.4"	""	"895.5"	"5.6"	"976.8"	"701.4"	""	"650"	"41"	"35.000"	"28.000"	"0.00285682317970037"	"26"	"0"	"7.431E-05"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"792.96600"	"1584.92473"	"1584.92489"	"-0.10"	"-0.00008"	"9/86"	"9"	"86"	"706881.226196289"	"HCD"	"MS2"	"0"	"45.6"	"100.000"	"76.8532"	"26219"	"26219"	"26195"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"110.4"	""	"59.2"	""	"24.3"	""	"82.5"	""	"98.8"	"58.2"	""	"656"	"38"	"35.000"	"28.000"	"0.00524655033385612"	"24"	"0"	"0.0003812"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"792.96600"	"1584.92473"	"1584.92489"	"-0.10"	"-0.00008"	"10/86"	"10"	"86"	"9696003.89532471"	"HCD"	"MS2"	"0"	"491.7"	"100.000"	"77.2146"	"26356"	"26356"	"26339"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1086.6"	""	"677.3"	""	"280.6"	""	"880.6"	"4.1"	"984.8"	"740.8"	""	"656"	"40"	"35.000"	"28.000"	"0.00340309320388308"	"25"	"0"	"7.704E-05"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"0.7321"	"0.0000"	"1"	"1"	"1"	"528.97986"	"1584.92502"	"1584.92489"	"0.08"	"0.00004"	"12/86"	"12"	"86"	"3762414.30645752"	"HCD"	"MS2"	"8.912995"	"82.0"	"100.000"	"76.9978"	"26268"	"26268"	"26249"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"179.1"	""	"129.9"	""	"49.9"	""	"153.8"	""	"150.6"	"116.1"	""	"653"	"56"	"35.000"	"28.000"	"7.77827306745613E-05"	""	"0"	"0.0001739"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"0.7400"	"0.0000"	"1"	"1"	"1"	"528.98022"	"1584.92612"	"1584.92489"	"0.77"	"0.00041"	"12/86"	"12"	"86"	"18402920.5944824"	"HCD"	"MS2"	"4.473152"	"152.9"	"40.400"	"77.2108"	"26365"	"26365"	"26348"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"320.3"	""	"214.3"	""	"86.2"	""	"283.6"	"0.3"	"312.0"	"231.2"	""	"654"	"50"	"35.000"	"28.000"	"0.000358548370138821"	"28"	"0"	"0.000303"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"528.98083"	"1584.92795"	"1584.92489"	"1.93"	"0.00102"	"12/86"	"12"	"86"	"13373335.5084229"	"HCD"	"MS2"	"3.808547"	"199.4"	"80.794"	"77.3254"	"26401"	"26401"	"26384"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"411.9"	""	"283.9"	""	"116.1"	""	"358.3"	""	"414.3"	"307.0"	""	"618"	"52"	"34.000"	"27.000"	"0.000210357731836366"	""	"0"	"8.226E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALENPDTASLLGR"	"[R].aLENPDTASLLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O88902"	"Tyrosine-protein phosphatase non-receptor type 23 (Fragment) OS=Rattus norvegicus OX=10116 GN=Ptpn23 PE=1 SV=2"	"O88902"	"Tyrosine-protein phosphatase non-receptor type 23 (Fragment) OS=Rattus norvegicus OX=10116 GN=Ptpn23 PE=1 SV=2"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"793.43988"	"1585.87248"	"1585.87470"	"-1.40"	"-0.00111"	"8/126"	"8"	"126"	"170423.887329102"	"HCD"	"MS2"	"38.43005"	"11.3"	"100.000"	"79.0640"	"27103"	"27103"	"27080"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.7"	""	"14.3"	""	"12.9"	""	"21.1"	""	"20.6"	"17.6"	""	"868"	"27"	"36.000"	"29.000"	"0.0787933797643541"	"15"	"0"	"0.002415"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALENPDTASLLGR"	"[R].aLENPDTASLLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O88902"	"Tyrosine-protein phosphatase non-receptor type 23 (Fragment) OS=Rattus norvegicus OX=10116 GN=Ptpn23 PE=1 SV=2"	"O88902"	"Tyrosine-protein phosphatase non-receptor type 23 (Fragment) OS=Rattus norvegicus OX=10116 GN=Ptpn23 PE=1 SV=2"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"793.44055"	"1585.87383"	"1585.87470"	"-0.55"	"-0.00044"	"7/126"	"7"	"126"	"159229.242980957"	"HCD"	"MS2"	"12.45505"	"10.6"	"100.000"	"79.0965"	"27120"	"27120"	"27097"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.6"	""	"17.5"	""	"15.5"	""	"18.2"	""	"18.0"	"19.4"	""	"878"	"36"	"36.000"	"29.000"	"0.0112840374863553"	"15"	"0"	"0.001341"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVFIK"	"[K].GDPIPNEQVFIk.[A]"	"K12(TMT6plex)"	"2"	"2"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"793.44244"	"1585.87761"	"1585.87872"	"-0.70"	"-0.00056"	"5/110"	"5"	"110"	"123610.550720215"	"HCD"	"MS2"	"26.6228"	"5.8"	"100.000"	"83.0182"	"28693"	"28693"	"28671"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.4"	""	"9.3"	""	"6.6"	""	"12.9"	""	"8.3"	"8.8"	""	"845"	"20"	"36.000"	"29.000"	"0.434336885958435"	"14"	"0.005617"	"0.06392"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVFIK"	"[K].GDPIPNEQVFIk.[A]"	"K12(TMT6plex)"	"2"	"2"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"793.44360"	"1585.87993"	"1585.87872"	"0.76"	"0.00060"	"4/110"	"4"	"110"	"105343.786376953"	"HCD"	"MS2"	"100"	"4.2"	"100.000"	"83.0244"	"28694"	"28694"	"28673"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.4"	""	"4.9"	""	"3.7"	""	"7.7"	""	"9.8"	"7.0"	""	"887"	"8"	"36.000"	"29.000"	"7.1267844571121"	"13"	"0.005874"	"0.06578"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQAGTLAVGAEGGLR"	"[R].gQAGTLAVGAEGGLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.9298"	"0.0000"	"1"	"1"	"1"	"793.44891"	"1585.89055"	"1585.88593"	"2.91"	"0.00231"	"9/150"	"9"	"150"	"388484.767944336"	"HCD"	"MS2"	"0"	"28.0"	"100.000"	"56.6928"	"18065"	"18065"	"18038"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.5"	""	"43.0"	""	"39.7"	""	"35.7"	"0.5"	"51.0"	"47.5"	""	"832"	"57"	"36.000"	"29.000"	"7.5005538019758E-05"	"20"	"0"	"1.884E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HESQVDSVVK"	"[K].hESQVDSVVk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"529.30280"	"1585.89383"	"1585.89499"	"-0.73"	"-0.00039"	"8/94"	"8"	"94"	"11359609.2360229"	"HCD"	"MS2"	"6.720987"	"272.6"	"100.000"	"33.6822"	"8708"	"8708"	"8692"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"396.3"	""	"339.7"	""	"343.7"	""	"453.8"	"13.6"	"472.7"	"564.3"	""	"869"	"42"	"36.000"	"29.000"	"0.00264843781850854"	"24"	"0"	"7.429E-05"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HESQVDSVVK"	"[K].hESQVDSVVk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"0"	"3"	"3"	"0.8222"	"0.0000"	"1"	"1"	"1"	"529.30322"	"1585.89511"	"1585.89499"	"0.08"	"0.00004"	"8/94"	"8"	"94"	"11447524.4360962"	"HCD"	"MS2"	"5.95007"	"264.4"	"100.000"	"33.7099"	"8713"	"8713"	"8693"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"370.8"	""	"324.5"	""	"353.2"	""	"444.3"	"20.1"	"449.5"	"543.1"	""	"883"	"45"	"36.000"	"29.000"	"0.00136122748003509"	"23"	"0"	"5.849E-05"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENEGTYYGPDGR"	"[K].eNEGTYYGPDGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"793.86780"	"1586.72832"	"1586.72843"	"-0.07"	"-0.00006"	"4/126"	"4"	"126"	"199547.938049316"	"HCD"	"MS2"	"100"	"14.0"	"100.000"	"36.2488"	"9741"	"9741"	"9721"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.8"	""	"20.2"	""	"14.5"	""	"21.4"	""	"26.7"	"26.2"	""	"320"	"12"	"32.000"	"25.000"	"1.09678116232426"	"13"	"0.001374"	"0.01683"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENEGTYYGPDGR"	"[K].eNEGTYYGPDGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"793.86792"	"1586.72856"	"1586.72843"	"0.08"	"0.00007"	"9/126"	"9"	"126"	"226740.230895996"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"36.0913"	"9683"	"9683"	"9667"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.3"	""	"24.9"	""	"18.2"	""	"25.4"	""	"29.6"	"30.4"	""	"320"	"43"	"32.000"	"25.000"	"0.000814929393691512"	"15"	"0"	"0.0001479"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GTQDSPAQSAAAPR"	"[].gTQDSPAqSAAAPR.[]"	"N-Term(TMT6plex); Q8(Deamidated)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"4"	"793.90350"	"1586.79973"	"1586.79718"	"1.61"	"0.00128"	"7/140"	"7"	"140"	"217056.69128418"	"HCD"	"MS2"	"0"	"15.7"	"100.000"	"66.8636"	"22165"	"22165"	"22140"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.5"	""	"12.2"	""	"11.3"	""	"32.4"	""	"41.0"	"37.9"	""	"682"	"1"	"35.000"	"28.000"	"27.9739876616468"	"13"	"0.001886"	"0.02177"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGEDPYPHK"	"[K].vSGEDPYPHk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"529.62390"	"1586.85715"	"1586.85788"	"-0.46"	"-0.00024"	"7/78"	"7"	"78"	"4894678.1920166"	"HCD"	"MS2"	"42.84202"	"123.0"	"100.000"	"41.8032"	"12003"	"12003"	"11985"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"189.4"	""	"144.5"	""	"157.1"	""	"202.3"	"5.6"	"243.9"	"223.4"	""	"935"	"26"	"36.000"	"29.000"	"0.111887511611952"	"19"	"0"	"0.001002"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSVEADINGLRR"	"[R].qSVEADINGLRR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFV4; Q6IFW6"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"1"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"529.63129"	"1586.87931"	"1586.88118"	"-1.18"	"-0.00063"	"9/118"	"9"	"118"	"2792455.39978027"	"HCD"	"MS2"	"8.641583"	"66.4"	"100.000"	"50.7550"	"15645"	"15645"	"15620"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"165.8"	""	"85.6"	""	"92.5"	""	"92.7"	""	"82.3"	"107.4"	""	"1003"	"40"	"37.000"	"30.000"	"0.00496902220363723"	"22"	"0"	"1.471E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSVEADINGLRR"	"[R].qSVEADINGLRR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFV4; Q6IFW6"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"1"	"3"	"3"	"0.8043"	"0.0000"	"1"	"1"	"1"	"529.63141"	"1586.87967"	"1586.88118"	"-0.95"	"-0.00050"	"16/118"	"16"	"118"	"2880374.93200684"	"HCD"	"MS2"	"11.62275"	"71.5"	"100.000"	"51.0611"	"15769"	"15769"	"15753"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"167.8"	""	"91.5"	""	"97.3"	""	"107.6"	"1.6"	"89.1"	"119.4"	""	"1009"	"46"	"37.000"	"30.000"	"0.00125562851707347"	"24"	"0"	"1.48E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSVEADINGLRR"	"[R].qSVEADINGLRR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFV4; Q6IFW6"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"1"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"529.63153"	"1586.88004"	"1586.88118"	"-0.72"	"-0.00038"	"7/118"	"7"	"118"	"2305268.61218262"	"HCD"	"MS2"	"10.34306"	"63.9"	"100.000"	"51.4533"	"15918"	"15918"	"15899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"136.8"	""	"74.3"	""	"95.8"	""	"99.7"	"3.0"	"91.2"	"102.5"	""	"1009"	"32"	"37.000"	"30.000"	"0.0300511551410386"	"19"	"0"	"0.00042"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSVEADINGLRR"	"[R].qSVEADINGLRR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFV4; Q6IFW6"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"1"	"3"	"3"	"0.7632"	"0.0000"	"1"	"1"	"1"	"529.63153"	"1586.88004"	"1586.88118"	"-0.72"	"-0.00038"	"8/118"	"8"	"118"	"2786430.20074463"	"HCD"	"MS2"	"4.060014"	"66.5"	"100.000"	"51.1286"	"15786"	"15786"	"15762"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"154.0"	""	"85.7"	""	"96.6"	""	"102.7"	"1.7"	"81.9"	"103.9"	""	"1009"	"38"	"37.000"	"30.000"	"0.00808837299603125"	"24"	"0"	"0.0001194"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDPATATSVDLR"	"[K].vIDPATATSVDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"793.95062"	"1586.89397"	"1586.89510"	"-0.71"	"-0.00057"	"5/112"	"5"	"112"	"128903.257751465"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"81.9069"	"28252"	"28252"	"28230"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.1"	""	"9.7"	""	"7.8"	""	"12.5"	""	"9.9"	"15.3"	""	"949"	"14"	"36.000"	"29.000"	"1.8631002184711"	"26"	"0.0008629"	"0.009716"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDPATATSVDLR"	"[K].vIDPATATSVDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"793.95135"	"1586.89543"	"1586.89510"	"0.21"	"0.00017"	"7/112"	"7"	"112"	"371156.306884766"	"HCD"	"MS2"	"3.394312"	"14.3"	"100.000"	"82.1865"	"28364"	"28364"	"28350"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.9"	""	"16.6"	""	"16.9"	""	"23.8"	""	"31.0"	"26.6"	""	"928"	"42"	"36.000"	"29.000"	"0.00285442068937378"	"25"	"0"	"0.003354"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDPATATSVDLR"	"[K].vIDPATATSVDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.6863"	"0.0000"	"1"	"1"	"1"	"793.95166"	"1586.89604"	"1586.89510"	"0.59"	"0.00047"	"8/112"	"8"	"112"	"341189.347900391"	"HCD"	"MS2"	"0"	"13.9"	"100.000"	"82.1556"	"28349"	"28349"	"28336"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.8"	""	"18.1"	""	"15.1"	""	"24.8"	""	"26.7"	"28.1"	""	"923"	"51"	"36.000"	"29.000"	"0.000390096187041474"	""	"0"	"0.0009882"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDPATATSVDLR"	"[K].vIDPATATSVDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"793.95233"	"1586.89739"	"1586.89510"	"1.44"	"0.00114"	"5/112"	"5"	"112"	"133966.21295166"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"81.8577"	"28229"	"28229"	"28208"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.1"	""	"8.9"	""	"7.5"	""	"13.6"	""	"9.6"	"12.5"	""	"906"	"12"	"36.000"	"29.000"	"2.85823677049528"	"22"	"0.001465"	"0.0185"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEFGDVMLGDYR"	"[K].gEFGDVMLGDYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"794.38892"	"1587.77056"	"1587.76746"	"1.95"	"0.00155"	"4/104"	"4"	"104"	"93605.846862793"	"HCD"	"MS2"	"25.15278"	"4.6"	"100.000"	"94.5066"	"33137"	"33137"	"33122"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.4"	""	"7.3"	""	"8.2"	""	"3.5"	""	"7.6"	"10.4"	""	"569"	"12"	"34.000"	"27.000"	"1.79507364504615"	"13"	"0.003449"	"0.03403"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAMQYASESK"	"[K].dAMQYASESk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"794.40759"	"1587.80791"	"1587.80888"	"-0.61"	"-0.00048"	"5/100"	"5"	"100"	"278479.098571777"	"HCD"	"MS2"	"0"	"28.8"	"100.000"	"52.5294"	"16369"	"16369"	"16344"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.4"	""	"30.0"	""	"32.1"	""	"48.2"	""	"62.1"	"65.7"	""	"785"	"23"	"35.000"	"28.000"	"0.198079559293685"	"14"	"0.001374"	"0.01655"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAMQYASESK"	"[K].dAMQYASESk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"794.40833"	"1587.80937"	"1587.80888"	"0.31"	"0.00025"	"16/100"	"16"	"100"	"872986.882873535"	"HCD"	"MS2"	"19.15928"	"74.5"	"100.000"	"52.5947"	"16384"	"16384"	"16361"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"106.1"	""	"74.0"	""	"78.0"	""	"100.3"	""	"177.5"	"179.1"	""	"807"	"50"	"36.000"	"29.000"	"0.000431363643766343"	"22"	"0"	"1.539E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAMQYASESK"	"[K].dAMQYASESk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"794.40936"	"1587.81145"	"1587.80888"	"1.62"	"0.00129"	"9/100"	"9"	"100"	"893960.171203613"	"HCD"	"MS2"	"64.1273"	"64.0"	"100.000"	"52.2210"	"16243"	"16243"	"16220"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.9"	""	"68.7"	""	"77.5"	""	"86.7"	""	"145.0"	"153.5"	""	"811"	"57"	"36.000"	"29.000"	"7.92484649316922E-05"	"24"	"0"	"2.935E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"529.94220"	"1587.81205"	"1587.81508"	"-1.91"	"-0.00101"	"6/96"	"6"	"96"	"5129046.0378418"	"HCD"	"MS2"	"19.04469"	"71.0"	"100.000"	"52.3592"	"16300"	"16300"	"16283"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.2"	""	"69.7"	""	"85.4"	""	"139.0"	"2.4"	"151.0"	"140.1"	""	"813"	"28"	"36.000"	"29.000"	"0.0676177242375473"	"18"	"0"	"0.0003727"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"529.94250"	"1587.81296"	"1587.81508"	"-1.33"	"-0.00071"	"12/96"	"12"	"96"	"4775156.54425049"	"HCD"	"MS2"	"7.806844"	"78.6"	"100.000"	"52.3575"	"16287"	"16287"	"16272"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.0"	""	"90.0"	""	"101.3"	""	"170.9"	"2.1"	"155.2"	"134.6"	""	"812"	"22"	"36.000"	"29.000"	"0.282830364728972"	"17"	"0"	"0.0004672"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"529.94257"	"1587.81314"	"1587.81508"	"-1.22"	"-0.00064"	"12/96"	"12"	"96"	"4758789.99047852"	"HCD"	"MS2"	"7.382174"	"72.5"	"100.000"	"52.0577"	"16176"	"16176"	"16158"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"86.0"	""	"79.0"	""	"91.8"	""	"159.4"	"2.0"	"142.2"	"127.0"	""	"819"	"20"	"36.000"	"29.000"	"0.405745681433588"	"17"	"0"	"0.0005714"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.8649"	"0.0000"	"1"	"1"	"1"	"529.94269"	"1587.81351"	"1587.81508"	"-0.99"	"-0.00052"	"11/96"	"11"	"96"	"5198690.39245605"	"HCD"	"MS2"	"15.02903"	"78.7"	"100.000"	"52.6617"	"16411"	"16411"	"16393"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"97.3"	""	"78.7"	""	"83.2"	""	"159.8"	""	"168.6"	"165.9"	""	"830"	"37"	"36.000"	"29.000"	"0.00889299599464825"	"20"	"0"	"0.0002303"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLEAAIADAEQR"	"[R].aTLEAAIADAEQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.7167"	"0.0000"	"1"	"1"	"1"	"794.42914"	"1587.85100"	"1587.85397"	"-1.87"	"-0.00148"	"15/116"	"15"	"116"	"319975.354553223"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"90.8417"	"31747"	"31747"	"31737"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.6"	""	"9.8"	""	"18.6"	""	"31.4"	""	"32.0"	"32.0"	""	"1021"	"60"	"37.000"	"30.000"	"5.30879244655735E-05"	""	"0"	"5.063E-06"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLEAAIADAEQR"	"[R].aTLEAAIADAEQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"794.42950"	"1587.85173"	"1587.85397"	"-1.41"	"-0.00112"	"6/116"	"6"	"116"	"85022.1224365234"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"90.5679"	"31638"	"31638"	"31621"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.3"	""	"5.6"	""	"5.4"	""	"8.7"	""	"7.4"	"9.0"	""	"1016"	"29"	"37.000"	"30.000"	"0.0688436221474327"	"23"	"0.0008629"	"0.01114"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLEAAIADAEQR"	"[R].aTLEAAIADAEQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"794.42993"	"1587.85259"	"1587.85397"	"-0.87"	"-0.00069"	"14/116"	"14"	"116"	"192668.644287109"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"90.8866"	"31761"	"31761"	"31745"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.7"	""	"9.7"	""	"9.9"	""	"17.2"	""	"20.9"	"18.7"	""	"1020"	"52"	"37.000"	"30.000"	"0.000310863817592486"	"25"	"0"	"2.553E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLEAAIADAEQR"	"[R].aTLEAAIADAEQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"794.42993"	"1587.85259"	"1587.85397"	"-0.87"	"-0.00069"	"5/116"	"5"	"116"	"106443.571472168"	"HCD"	"MS2"	"100"	"4.8"	"100.000"	"90.5553"	"31630"	"31630"	"31613"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.4"	""	"4.7"	""	"5.0"	""	"11.7"	""	"6.3"	"11.9"	""	"1020"	"7"	"37.000"	"30.000"	"10.509212557677"	"13"	"0.004942"	"0.05499"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLEAAIADAEQR"	"[R].aTLEAAIADAEQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"529.95587"	"1587.85306"	"1587.85397"	"-0.57"	"-0.00030"	"16/116"	"16"	"116"	"1063671.93365479"	"HCD"	"MS2"	"11.43701"	"11.7"	"100.000"	"90.7708"	"31719"	"31719"	"31707"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.1"	""	"13.8"	""	"17.3"	""	"19.3"	""	"23.9"	"24.2"	""	"1025"	"51"	"37.000"	"30.000"	"0.000418498465321279"	""	"0"	"2.736E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLEAAIADAEQR"	"[R].aTLEAAIADAEQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"529.95605"	"1587.85361"	"1587.85397"	"-0.22"	"-0.00012"	"15/116"	"15"	"116"	"1092692.27270508"	"HCD"	"MS2"	"34.29002"	"9.6"	"100.000"	"90.7256"	"31697"	"31697"	"31684"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.6"	""	"7.1"	""	"9.4"	""	"19.4"	""	"24.5"	"15.5"	""	"1033"	"54"	"37.000"	"30.000"	"0.000208482845467768"	""	"0"	"1.365E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQQELDGALK"	"[K].qQQELDGALk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"0"	"2"	"2"	"0.5897"	"0.0000"	"1"	"1"	"1"	"794.45856"	"1587.90984"	"1587.91064"	"-0.51"	"-0.00040"	"8/94"	"8"	"94"	"297072.466003418"	"HCD"	"MS2"	"15.49648"	"24.7"	"100.000"	"54.5115"	"17176"	"17176"	"17145"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.5"	""	"30.3"	""	"23.1"	""	"52.0"	""	"55.1"	"53.6"	""	"933"	"39"	"36.000"	"29.000"	"0.00652907485980126"	""	"0"	"0.000503"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQQELDGALK"	"[K].qQQELDGALk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"794.45966"	"1587.91203"	"1587.91064"	"0.88"	"0.00070"	"6/94"	"6"	"94"	"251823.453063965"	"HCD"	"MS2"	"0"	"19.9"	"100.000"	"54.6755"	"17230"	"17230"	"17200"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.6"	""	"21.7"	""	"20.6"	""	"37.4"	""	"41.3"	"48.6"	""	"878"	"16"	"36.000"	"29.000"	"1.00569089956505"	"19"	"0.005921"	"0.06862"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELVAEQAIK"	"[K].eELVAEQAIk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"794.47113"	"1587.93498"	"1587.93579"	"-0.51"	"-0.00040"	"8/88"	"8"	"88"	"89366.2885742188"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"72.2729"	"24355"	"24355"	"24330"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.7"	""	"6.6"	""	"13.2"	""	"10.1"	""	"16.5"	"11.0"	""	"774"	"14"	"35.000"	"28.000"	"1.4115977746021"	"16"	"0.004431"	"0.04633"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELVAEQALK"	"[K].eELVAEQALk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WTT7"	"Basic leucine zipper and W2 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Bzw2 PE=1 SV=1"	"Q9WTT7"	"Basic leucine zipper and W2 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Bzw2 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"794.47113"	"1587.93498"	"1587.93579"	"-0.51"	"-0.00040"	"8/88"	"8"	"88"	"89366.2885742188"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"72.2729"	"24355"	"24355"	"24330"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.7"	""	"6.6"	""	"13.2"	""	"10.1"	""	"16.5"	"11.0"	""	"774"	"14"	"35.000"	"28.000"	"1.4115977746021"	"16"	"0.004431"	"0.04633"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAENYFDSTGR"	"[K].sLAENYFDSTGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"794.89270"	"1588.77812"	"1588.78047"	"-1.47"	"-0.00117"	"8/120"	"8"	"120"	"235341.325256348"	"HCD"	"MS2"	"0"	"16.1"	"100.000"	"72.4365"	"24422"	"24422"	"24393"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.9"	""	"16.2"	""	"22.6"	""	"22.5"	""	"33.8"	"29.9"	""	"623"	"43"	"34.000"	"27.000"	"0.00156840439637433"	"15"	"0"	"8.104E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAENYFDSTGR"	"[K].sLAENYFDSTGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"0"	"2"	"2"	"0.9531"	"0.0000"	"1"	"1"	"1"	"794.89362"	"1588.77995"	"1588.78047"	"-0.32"	"-0.00026"	"11/120"	"11"	"120"	"331926.361816406"	"HCD"	"MS2"	"0"	"21.7"	"100.000"	"72.3796"	"24412"	"24412"	"24389"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.2"	""	"21.8"	""	"28.0"	""	"34.2"	""	"43.4"	"44.5"	""	"637"	"64"	"35.000"	"28.000"	"1.38073214766428E-05"	"19"	"0"	"5.707E-06"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAENYFDSTGR"	"[K].sLAENYFDSTGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"794.89404"	"1588.78081"	"1588.78047"	"0.22"	"0.00017"	"4/120"	"4"	"120"	"81844.2983398438"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"72.6887"	"24538"	"24538"	"24513"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.8"	""	"9.9"	""	"9.2"	""	"9.7"	""	"9.3"	"12.7"	""	"627"	"8"	"34.000"	"27.000"	"4.95721260311265"	"13"	"0.006189"	"0.07062"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAENYFDSTGR"	"[K].sLAENYFDSTGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"794.89417"	"1588.78105"	"1588.78047"	"0.37"	"0.00029"	"7/120"	"7"	"120"	"136612.033935547"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"72.7570"	"24552"	"24552"	"24530"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.5"	""	"9.0"	""	"15.3"	""	"16.6"	""	"19.5"	"17.6"	""	"637"	"28"	"35.000"	"28.000"	"0.0497862524181144"	"14"	"0"	"0.001182"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGAQASSTPLSPTR"	"[R].sGAQASSTPLSPTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.8209"	"0.0000"	"1"	"1"	"1"	"794.92780"	"1588.84831"	"1588.84921"	"-0.57"	"-0.00045"	"12/148"	"12"	"148"	"852881.43170166"	"HCD"	"MS2"	"0"	"41.5"	"100.000"	"33.7650"	"8742"	"8742"	"8715"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.1"	""	"35.7"	""	"19.9"	""	"79.7"	""	"100.6"	"136.8"	""	"1019"	"67"	"37.000"	"30.000"	"1.13277638928689E-05"	"29"	"0"	"5.315E-08"	"1.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGAQASSTPLSPTR"	"[R].sGAQASSTPLSPTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.7846"	"0.0000"	"1"	"1"	"1"	"794.92780"	"1588.84831"	"1588.84921"	"-0.57"	"-0.00045"	"12/148"	"12"	"148"	"1193892.34411621"	"HCD"	"MS2"	"100"	"56.7"	"100.000"	"33.4502"	"8615"	"8615"	"8591"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.5"	""	"42.0"	""	"33.8"	""	"101.7"	""	"149.3"	"188.8"	""	"1019"	"65"	"37.000"	"30.000"	"1.65631978017879E-05"	"30"	"0"	"2.059E-07"	"1.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGAQASSTPLSPTR"	"[R].sGAQASSTPLSPTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.7536"	"0.0000"	"1"	"1"	"1"	"794.92804"	"1588.84880"	"1588.84921"	"-0.26"	"-0.00021"	"12/148"	"12"	"148"	"1181086.09368896"	"HCD"	"MS2"	"0"	"57.6"	"100.000"	"33.7536"	"8731"	"8731"	"8707"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.2"	""	"41.9"	""	"24.9"	""	"112.6"	""	"146.2"	"194.7"	""	"1025"	"69"	"37.000"	"30.000"	"6.77164012520619E-06"	""	"0"	"2.961E-07"	"1.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGAQASSTPLSPTR"	"[R].sGAQASSTPLSPTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.8088"	"0.0000"	"1"	"1"	"1"	"794.92847"	"1588.84966"	"1588.84921"	"0.28"	"0.00022"	"16/148"	"16"	"148"	"853985.623901367"	"HCD"	"MS2"	"0"	"38.6"	"100.000"	"33.4365"	"8603"	"8603"	"8576"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.2"	""	"20.6"	""	"20.9"	""	"77.4"	"1.2"	"98.3"	"127.8"	""	"1013"	"68"	"37.000"	"30.000"	"7.66618772332939E-06"	"30"	"0"	"5.775E-08"	"1.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLPNQR"	"[R].aGEmTEVLPNQR.[Y]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"795.41040"	"1589.81352"	"1589.81547"	"-1.23"	"-0.00097"	"5/98"	"5"	"98"	"119812.991271973"	"HCD"	"MS2"	"100"	"8.4"	"100.000"	"40.2900"	"11380"	"11380"	"11352"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.8"	""	"13.3"	""	"9.5"	""	"12.0"	""	"16.0"	"16.8"	""	"841"	"7"	"36.000"	"29.000"	"7.74044626617695"	"16"	"0.008478"	"0.1036"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLPNQR"	"[R].aGEmTEVLPNQR.[Y]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"795.41113"	"1589.81499"	"1589.81547"	"-0.30"	"-0.00024"	"11/98"	"11"	"98"	"138803.869873047"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"40.0456"	"11289"	"11289"	"11262"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.9"	""	"10.4"	""	"7.1"	""	"17.0"	""	"15.2"	"10.7"	""	"841"	"14"	"36.000"	"29.000"	"1.78552526639425"	"23"	"0.006958"	"0.08115"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPVDASGTEK"	"[R].vEPVDASGTEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"795.44116"	"1589.87505"	"1589.87867"	"-2.28"	"-0.00181"	"7/96"	"7"	"96"	"143336.953063965"	"HCD"	"MS2"	"100"	"13.5"	"100.000"	"48.3208"	"14641"	"14641"	"14619"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.9"	""	"15.3"	""	"20.2"	""	"21.8"	""	"26.6"	"22.6"	""	"1077"	"8"	"37.000"	"30.000"	"8.2639124523742"	"16"	"0.007018"	"0.08152"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPVDASGTEK"	"[R].vEPVDASGTEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8776"	"0.0000"	"1"	"1"	"1"	"530.63019"	"1589.87601"	"1589.87867"	"-1.67"	"-0.00089"	"13/96"	"13"	"96"	"1521362.60308838"	"HCD"	"MS2"	"13.89059"	"53.6"	"100.000"	"47.8022"	"14442"	"14442"	"14423"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.7"	""	"68.0"	""	"75.5"	""	"85.5"	"0.4"	"97.6"	"101.2"	""	"1083"	"49"	"37.000"	"30.000"	"0.000620295257792758"	"22"	"0"	"6.047E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPVDASGTEK"	"[R].vEPVDASGTEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8776"	"0.0000"	"1"	"1"	"1"	"530.63062"	"1589.87729"	"1589.87867"	"-0.87"	"-0.00046"	"15/96"	"15"	"96"	"2363147.28424072"	"HCD"	"MS2"	"6.90071"	"69.4"	"100.000"	"48.1010"	"14551"	"14551"	"14533"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"99.1"	""	"78.3"	""	"99.6"	""	"112.6"	"1.1"	"133.1"	"133.8"	""	"1063"	"49"	"37.000"	"30.000"	"0.000617309938256142"	"21"	"0"	"3.274E-05"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPVDASGTEK"	"[R].vEPVDASGTEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"795.44232"	"1589.87737"	"1589.87867"	"-0.82"	"-0.00065"	"10/96"	"10"	"96"	"1465585.47283936"	"HCD"	"MS2"	"0"	"106.3"	"100.000"	"47.7565"	"14424"	"14424"	"14407"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"179.2"	""	"129.5"	""	"145.0"	""	"156.9"	""	"195.1"	"204.3"	""	"1063"	"65"	"37.000"	"30.000"	"1.59038865435725E-05"	"27"	"0"	"1.784E-06"	"1.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPVDASGTEK"	"[R].vEPVDASGTEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8358"	"0.0000"	"1"	"1"	"1"	"795.44238"	"1589.87749"	"1589.87867"	"-0.74"	"-0.00059"	"17/96"	"17"	"96"	"2925573.96716309"	"HCD"	"MS2"	"0"	"193.9"	"100.000"	"47.4618"	"14303"	"14303"	"14286"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"350.9"	""	"254.3"	""	"247.0"	""	"312.0"	""	"348.7"	"322.8"	""	"1066"	"67"	"37.000"	"30.000"	"1.08824632450886E-05"	"27"	"0"	"8.316E-06"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPVDASGTEK"	"[R].vEPVDASGTEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8776"	"0.0000"	"1"	"1"	"1"	"530.63086"	"1589.87802"	"1589.87867"	"-0.41"	"-0.00022"	"16/96"	"16"	"96"	"5484725.4744873"	"HCD"	"MS2"	"14.98485"	"135.0"	"100.000"	"47.8042"	"14431"	"14431"	"14410"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"233.9"	""	"169.8"	""	"172.9"	""	"231.5"	"1.0"	"232.1"	"236.5"	""	"1061"	"49"	"37.000"	"30.000"	"0.00071069848267946"	"22"	"0"	"2.748E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPVDASGTEK"	"[R].vEPVDASGTEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"530.63086"	"1589.87802"	"1589.87867"	"-0.41"	"-0.00022"	"11/96"	"11"	"96"	"6937356.8135376"	"HCD"	"MS2"	"14.98876"	"154.6"	"100.000"	"47.4965"	"14318"	"14318"	"14301"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"258.2"	""	"208.6"	""	"194.5"	""	"241.8"	"1.4"	"284.7"	"274.4"	""	"1061"	"55"	"37.000"	"30.000"	"0.00018521893736139"	"21"	"0"	"2.707E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPVDASGTEK"	"[R].vEPVDASGTEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8507"	"0.0000"	"1"	"1"	"1"	"795.44318"	"1589.87908"	"1589.87867"	"0.25"	"0.00020"	"17/96"	"17"	"96"	"3148405.6607666"	"HCD"	"MS2"	"0"	"216.5"	"100.000"	"48.0067"	"14514"	"14514"	"14499"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"391.3"	""	"247.4"	""	"304.3"	""	"334.2"	"1.1"	"389.7"	"381.3"	""	"1062"	"67"	"37.000"	"30.000"	"1.0866621021008E-05"	"27"	"0"	"2.312E-06"	"1.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVDGLIQETK"	"[K].qVDGLIqETk.[A]"	"N-Term(TMT6plex); Q7(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q80X08"	"WASH complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Washc2 PE=1 SV=1"	"Q80X08"	"WASH complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Washc2 PE=1 SV=1"	"0"	"3"	"3"	"0.4667"	"0.0000"	"1"	"1"	"1"	"530.64276"	"1589.91373"	"1589.91506"	"-0.84"	"-0.00044"	"4/102"	"4"	"102"	"1620081.80529785"	"HCD"	"MS2"	"39.27893"	"47.1"	"100.000"	"71.7544"	"24144"	"24144"	"24120"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.2"	""	"65.0"	""	"61.4"	""	"71.6"	"0.6"	"82.9"	"106.5"	""	"1024"	"15"	"37.000"	"30.000"	"1.76713594539958"	"22"	"0.006769"	"0.0777"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNPEYDYLFK"	"[-].mNPEYDYLFk.[L]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.88904"	"1590.77080"	"1590.77115"	"-0.22"	"-0.00017"	"5/92"	"5"	"92"	"126471.91619873"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"111.0694"	"38703"	"38703"	"38698"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.7"	""	"10.0"	""	"13.1"	""	"6.1"	""	"12.4"	"11.8"	""	"588"	"21"	"34.000"	"27.000"	"0.261425128650237"	"14"	"0.000936"	"0.01304"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEGNNLLTEK"	"[R].dEGNNLLTEk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16975"	"SPARC OS=Rattus norvegicus OX=10116 GN=Sparc PE=1 SV=4"	"P16975"	"SPARC OS=Rattus norvegicus OX=10116 GN=Sparc PE=1 SV=4"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"795.94019"	"1590.87309"	"1590.87392"	"-0.52"	"-0.00041"	"10/100"	"10"	"100"	"247501.109008789"	"HCD"	"MS2"	"0"	"23.1"	"100.000"	"60.7433"	"19668"	"19668"	"19640"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.4"	""	"30.3"	""	"32.5"	""	"36.6"	""	"42.8"	"39.7"	""	"1125"	"29"	"37.000"	"30.000"	"0.0644351029563114"	"18"	"0.001374"	"0.01658"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELDSNNEK"	"[K].aLELDSNNEk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"795.94037"	"1590.87346"	"1590.87392"	"-0.29"	"-0.00023"	"9/90"	"9"	"90"	"172277.72442627"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"57.4893"	"18375"	"18375"	"18351"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.0"	""	"21.2"	""	"23.7"	""	"29.2"	""	"24.7"	"32.3"	""	"1161"	"19"	"37.000"	"30.000"	"0.740972728514985"	"18"	"0.002547"	"0.02525"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEGNNLLTEK"	"[R].dEGNNLLTEk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16975"	"SPARC OS=Rattus norvegicus OX=10116 GN=Sparc PE=1 SV=4"	"P16975"	"SPARC OS=Rattus norvegicus OX=10116 GN=Sparc PE=1 SV=4"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"795.94043"	"1590.87358"	"1590.87392"	"-0.21"	"-0.00017"	"6/100"	"6"	"100"	"281413.192932129"	"HCD"	"MS2"	"19.5052"	"28.1"	"100.000"	"61.0425"	"19789"	"19789"	"19766"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.0"	""	"31.5"	""	"35.7"	""	"49.3"	"0.6"	"51.2"	"53.9"	""	"1169"	"40"	"37.000"	"30.000"	"0.00562062376715252"	"23"	"0"	"0.001766"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEGNNLLTEK"	"[R].dEGNNLLTEk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16975"	"SPARC OS=Rattus norvegicus OX=10116 GN=Sparc PE=1 SV=4"	"P16975"	"SPARC OS=Rattus norvegicus OX=10116 GN=Sparc PE=1 SV=4"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"795.94073"	"1590.87419"	"1590.87392"	"0.17"	"0.00014"	"13/100"	"13"	"100"	"291924.618713379"	"HCD"	"MS2"	"19.20667"	"24.4"	"100.000"	"60.8819"	"19739"	"19739"	"19721"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.6"	""	"26.0"	""	"32.1"	""	"37.7"	""	"51.6"	"54.8"	""	"1144"	"31"	"37.000"	"30.000"	"0.0410578334607219"	"18"	"0"	"0.001705"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEGNNLLTEK"	"[R].dEGNNLLTEk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16975"	"SPARC OS=Rattus norvegicus OX=10116 GN=Sparc PE=1 SV=4"	"P16975"	"SPARC OS=Rattus norvegicus OX=10116 GN=Sparc PE=1 SV=4"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"795.94171"	"1590.87615"	"1590.87392"	"1.40"	"0.00111"	"7/100"	"7"	"100"	"215928.507446289"	"HCD"	"MS2"	"0"	"19.8"	"100.000"	"60.5526"	"19605"	"19605"	"19591"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.5"	""	"22.3"	""	"25.9"	""	"37.4"	""	"34.2"	"37.2"	""	"1111"	"51"	"37.000"	"30.000"	"0.000437203936175627"	"28"	"0.0008629"	"0.01053"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSAPPGPVPEGQIR"	"[K].gSAPPGPVPEGQIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.94238"	"1590.87749"	"1590.88012"	"-1.65"	"-0.00132"	"8/124"	"8"	"124"	"259141.217834473"	"HCD"	"MS2"	"0"	"11.7"	"100.000"	"47.0908"	"14140"	"14140"	"14113"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.2"	""	"14.3"	""	"19.2"	""	"17.5"	""	"19.9"	"22.0"	""	"1139"	"38"	"37.000"	"30.000"	"0.00938628481973778"	"15"	"0"	"0.001673"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSAPPGPVPEGQIR"	"[K].gSAPPGPVPEGQIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"530.96429"	"1590.87833"	"1590.88012"	"-1.13"	"-0.00060"	"10/124"	"10"	"124"	"2509525.9765625"	"HCD"	"MS2"	"16.25699"	"49.8"	"100.000"	"46.9418"	"14091"	"14091"	"14062"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"64.2"	""	"63.3"	""	"60.8"	""	"79.6"	"2.6"	"98.2"	"104.5"	""	"1135"	"37"	"37.000"	"30.000"	"0.0125304268598823"	"18"	"0"	"0.0002008"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSAPPGPVPEGQIR"	"[K].gSAPPGPVPEGQIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"530.96442"	"1590.87870"	"1590.88012"	"-0.90"	"-0.00047"	"10/124"	"10"	"124"	"4365842.05609131"	"HCD"	"MS2"	"28.6984"	"88.7"	"100.000"	"47.2410"	"14213"	"14213"	"14190"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"153.7"	""	"138.5"	""	"114.5"	""	"124.6"	"2.9"	"153.3"	"152.1"	""	"1189"	"43"	"37.000"	"30.000"	"0.00268628358930891"	"15"	"0"	"3.996E-05"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSAPPGPVPEGQIR"	"[K].gSAPPGPVPEGQIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"2"	"2"	"0.9787"	"0.0000"	"1"	"1"	"1"	"795.94305"	"1590.87883"	"1590.88012"	"-0.81"	"-0.00064"	"15/124"	"15"	"124"	"686710.775390625"	"HCD"	"MS2"	"0"	"23.8"	"100.000"	"46.8934"	"14071"	"14071"	"14046"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.4"	""	"30.6"	""	"38.9"	""	"36.7"	"0.6"	"34.3"	"36.1"	""	"1189"	"47"	"37.000"	"30.000"	"0.00126809520086564"	"16"	"0"	"3.381E-05"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSAPPGPVPEGQIR"	"[K].gSAPPGPVPEGQIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"795.94330"	"1590.87932"	"1590.88012"	"-0.50"	"-0.00040"	"12/124"	"12"	"124"	"1587316.87878418"	"HCD"	"MS2"	"0"	"50.7"	"100.000"	"47.3852"	"14260"	"14260"	"14241"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"93.1"	""	"63.3"	""	"77.3"	""	"77.0"	""	"81.7"	"86.8"	""	"1160"	"53"	"37.000"	"30.000"	"0.000284071715233699"	"17"	"0"	"8.003E-07"	"1.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSAPPGPVPEGQIR"	"[K].gSAPPGPVPEGQIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"530.96490"	"1590.88016"	"1590.88012"	"0.03"	"0.00001"	"11/124"	"11"	"124"	"2262350.49707031"	"HCD"	"MS2"	"13.2006"	"45.2"	"100.000"	"47.2381"	"14200"	"14200"	"14177"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.1"	""	"57.2"	""	"67.2"	""	"75.1"	"0.2"	"85.4"	"88.2"	""	"1158"	"46"	"37.000"	"30.000"	"0.00139533524320954"	"15"	"0"	"0.0002215"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSAPPGPVPEGQIR"	"[K].gSAPPGPVPEGQIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"2"	"2"	"0.9851"	"0.0000"	"1"	"1"	"1"	"795.94391"	"1590.88054"	"1590.88012"	"0.26"	"0.00021"	"12/124"	"12"	"124"	"1423380.63519287"	"HCD"	"MS2"	"0"	"46.3"	"100.000"	"47.1973"	"14195"	"14195"	"14174"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.7"	""	"59.2"	""	"73.3"	""	"68.2"	"0.8"	"72.1"	"85.8"	""	"1125"	"67"	"37.000"	"30.000"	"1.07429245794351E-05"	"17"	"0"	"1.714E-06"	"1.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSAPPGPVPEGQIR"	"[K].gSAPPGPVPEGQIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"795.94403"	"1590.88078"	"1590.88012"	"0.42"	"0.00033"	"8/124"	"8"	"124"	"1457913.51586914"	"HCD"	"MS2"	"0"	"96.7"	"100.000"	"47.7259"	"14399"	"14399"	"14381"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"166.1"	""	"141.9"	""	"137.1"	""	"150.4"	""	"166.6"	"157.9"	""	"1128"	"9"	"37.000"	"30.000"	"7.69624889036154"	"16"	"0.0001301"	"0.004803"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVENEVSTLK"	"[R].nVENEVSTLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"795.95819"	"1590.90911"	"1590.91031"	"-0.76"	"-0.00060"	"9/100"	"9"	"100"	"167551.738037109"	"HCD"	"MS2"	"0"	"16.8"	"100.000"	"66.1552"	"21861"	"21861"	"21832"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.5"	""	"14.9"	""	"20.2"	""	"27.1"	"0.7"	"38.7"	"38.8"	""	"973"	"27"	"36.000"	"29.000"	"0.104011855654283"	"16"	"0.003111"	"0.03178"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVENEVSTLK"	"[R].nVENEVSTLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"795.95850"	"1590.90972"	"1590.91031"	"-0.37"	"-0.00030"	"9/100"	"9"	"100"	"175132.14440918"	"HCD"	"MS2"	"22.09737"	"16.7"	"100.000"	"66.0706"	"21842"	"21842"	"21812"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.1"	""	"16.7"	""	"16.1"	""	"31.0"	""	"39.2"	"39.3"	""	"973"	"24"	"36.000"	"29.000"	"0.179507601704378"	"16"	"0"	"0.003114"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGEAGVTLGQPHLSR"	"[M].aGGEAGVTLGQPHLSR.[Q]"	"N-Term(Prot)(Acetyl)"	"1"	"2"	"C9WPN6"	"Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3y PE=2 SV=2"	"P81795; C9WPN6"	"Eukaryotic translation initiation factor 2 subunit 3, X-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3 PE=1 SV=2; Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3y PE=2 SV=2"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"796.41034"	"1591.81340"	"1591.81869"	"-3.32"	"-0.00265"	"6/152"	"6"	"152"	"116267.962890625"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"57.2129"	"18263"	"18263"	"18238"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.6"	""	"9.2"	""	"5.2"	""	"6.1"	""	"11.7"	"8.8"	"NoQuanLabels"	"832"	"43"	"36.000"	"29.000"	"0.00221357035854986"	"24"	"0"	"0.0002019"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGEAGVTLGQPHLSR"	"[M].aGGEAGVTLGQPHLSR.[Q]"	"N-Term(Prot)(Acetyl)"	"1"	"2"	"C9WPN6"	"Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3y PE=2 SV=2"	"P81795; C9WPN6"	"Eukaryotic translation initiation factor 2 subunit 3, X-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3 PE=1 SV=2; Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3y PE=2 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"796.41211"	"1591.81694"	"1591.81869"	"-1.10"	"-0.00088"	"7/152"	"7"	"152"	"176893.184631348"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"57.0704"	"18219"	"18219"	"18195"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.0"	""	"8.3"	""	"10.7"	""	"7.5"	""	"9.8"	"10.9"	"NoQuanLabels"	"853"	"54"	"36.000"	"29.000"	"0.000170184120857454"	"22"	"0"	"0.0001023"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVTYTEHAK"	"[R].dAVTYTEHAk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"0"	"2"	"2"	"0.0833"	"0.0000"	"1"	"1"	"1"	"796.93805"	"1592.86882"	"1592.86844"	"0.24"	"0.00019"	"8/84"	"8"	"84"	"123382.005554199"	"HCD"	"MS2"	"0"	"10.6"	"100.000"	"38.2781"	"10560"	"10560"	"10533"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.4"	""	"6.7"	""	"6.5"	""	"21.2"	""	"26.0"	"31.1"	""	"1062"	"12"	"37.000"	"30.000"	"3.02757228581077"	"24"	"0.007413"	"0.08818"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EESESVLTLK"	"[R].eESESVLTLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1; Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"796.96039"	"1592.91350"	"1592.91472"	"-0.77"	"-0.00061"	"5/86"	"5"	"86"	"108244.320678711"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"75.1455"	"25528"	"25528"	"25502"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.3"	""	"12.2"	""	"15.1"	""	"11.0"	""	"17.9"	"16.5"	""	"858"	"21"	"36.000"	"29.000"	"0.379714596617428"	"15"	"0.004676"	"0.05039"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EESESVLTLK"	"[R].eESESVLTLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1; Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"796.96112"	"1592.91496"	"1592.91472"	"0.15"	"0.00012"	"11/86"	"11"	"86"	"351300.841064453"	"HCD"	"MS2"	"6.152708"	"33.3"	"100.000"	"74.9638"	"25443"	"25443"	"25425"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.6"	""	"48.4"	""	"46.1"	""	"49.5"	""	"63.1"	"68.6"	""	"873"	"35"	"36.000"	"29.000"	"0.0125887975111476"	"20"	"0"	"0.001609"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EESESVLTLK"	"[R].eESESVLTLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1; Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"796.96130"	"1592.91533"	"1592.91472"	"0.38"	"0.00030"	"5/86"	"5"	"86"	"91218.2275390625"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"75.2781"	"25570"	"25570"	"25547"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.0"	""	"10.0"	""	"13.0"	""	"15.3"	""	"18.1"	"15.0"	""	"874"	"30"	"36.000"	"29.000"	"0.043299355991814"	"17"	"0.004022"	"0.04259"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EESESVLTLK"	"[R].eESESVLTLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1; Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"796.96143"	"1592.91557"	"1592.91472"	"0.53"	"0.00043"	"8/86"	"8"	"86"	"393346.949707031"	"HCD"	"MS2"	"0"	"35.7"	"100.000"	"74.8222"	"25403"	"25403"	"25384"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"51.9"	""	"46.2"	""	"47.0"	""	"54.2"	"0.7"	"69.4"	"69.2"	""	"871"	"40"	"36.000"	"29.000"	"0.00423631415954868"	"23"	"0"	"0.000215"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDMDSIIAEVR"	"[R].sLDmDSIIAEVR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"797.42114"	"1593.83501"	"1593.83554"	"-0.33"	"-0.00027"	"9/106"	"9"	"106"	"290957.718566895"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"84.5791"	"29307"	"29307"	"29291"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.0"	""	"9.2"	""	"10.5"	""	"49.7"	""	"17.6"	"26.4"	""	"911"	"58"	"36.000"	"29.000"	"7.9339303082988E-05"	"18"	"0"	"0.001773"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDMDSIIAEVR"	"[R].sLDmDSIIAEVR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"797.42126"	"1593.83525"	"1593.83554"	"-0.18"	"-0.00014"	"15/106"	"15"	"106"	"323943.865905762"	"HCD"	"MS2"	"0"	"13.9"	"100.000"	"85.4996"	"29666"	"29666"	"29657"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.9"	""	"9.4"	""	"11.1"	""	"45.6"	""	"28.9"	"26.2"	""	"929"	"58"	"36.000"	"29.000"	"7.26082080006723E-05"	"18"	"0"	"0.003482"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDMDSIIAEVR"	"[R].sLDmDSIIAEVR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.42145"	"1593.83562"	"1593.83554"	"0.05"	"0.00004"	"10/106"	"10"	"106"	"419104.508666992"	"HCD"	"MS2"	"0"	"17.6"	"100.000"	"84.5631"	"29299"	"29299"	"29284"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.8"	""	"8.5"	""	"16.1"	""	"60.9"	"1.4"	"30.9"	"35.1"	""	"929"	"55"	"36.000"	"29.000"	"0.000146212909190006"	"16"	"0.0001301"	"0.004196"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDMDSIIAEVR"	"[R].sLDmDSIIAEVR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"797.42157"	"1593.83586"	"1593.83554"	"0.20"	"0.00016"	"16/106"	"16"	"106"	"282229.926208496"	"HCD"	"MS2"	"0"	"13.5"	"100.000"	"85.4738"	"29656"	"29656"	"29651"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.7"	""	"6.9"	""	"10.9"	""	"51.2"	""	"24.3"	"21.7"	""	"918"	"64"	"36.000"	"29.000"	"2.03148062914445E-05"	"18"	"0"	"0.0014"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDMDSIIAEVR"	"[R].sLDmDSIIAEVR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.42200"	"1593.83672"	"1593.83554"	"0.74"	"0.00059"	"5/106"	"5"	"106"	"128042.540771484"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"85.1856"	"29548"	"29548"	"29530"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.0"	""	"7.0"	""	"6.3"	""	"21.9"	""	"11.2"	"11.7"	""	"963"	"28"	"36.000"	"29.000"	"0.0695979249614164"	"14"	"0.003967"	"0.0417"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDMDSIIAEVR"	"[R].sLDmDSIIAEVR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.42206"	"1593.83684"	"1593.83554"	"0.82"	"0.00065"	"13/106"	"13"	"106"	"172816.216552734"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"84.2690"	"29184"	"29184"	"29159"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.6"	""	"6.2"	""	"6.6"	""	"29.5"	""	"19.3"	"15.5"	""	"963"	"35"	"36.000"	"29.000"	"0.0138228085024489"	"15"	"0.0008629"	"0.009549"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDMDSIIAEVR"	"[R].sLDmDSIIAEVR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.42212"	"1593.83696"	"1593.83554"	"0.89"	"0.00071"	"11/106"	"11"	"106"	"175586.393005371"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"85.2318"	"29566"	"29566"	"29547"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.8"	""	"6.9"	""	"13.0"	""	"27.4"	""	"14.1"	"15.8"	""	"963"	"23"	"36.000"	"29.000"	"0.236917036430619"	"14"	"0.005874"	"0.06705"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SRLEQEIATYR"	"[K].sRLEQEIATYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"0.9783"	"0.0000"	"1"	"1"	"1"	"532.29590"	"1594.87314"	"1594.87504"	"-1.19"	"-0.00063"	"9/114"	"9"	"114"	"7324040.00079346"	"HCD"	"MS2"	"4.548347"	"112.7"	"100.000"	"56.8173"	"18116"	"18116"	"18099"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"162.7"	""	"135.5"	""	"174.3"	""	"171.4"	""	"192.9"	"232.3"	""	"1038"	"46"	"37.000"	"30.000"	"0.00125941063934777"	"17"	"0"	"0.0005203"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SRLEQEIATYR"	"[K].sRLEQEIATYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"532.29614"	"1594.87387"	"1594.87504"	"-0.73"	"-0.00039"	"9/114"	"9"	"114"	"7473352.85070801"	"HCD"	"MS2"	"3.293858"	"108.1"	"91.473"	"56.9690"	"18164"	"18164"	"18147"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"169.6"	""	"134.9"	""	"153.7"	""	"170.2"	""	"180.9"	"215.1"	""	"1038"	"52"	"37.000"	"30.000"	"0.00030772824345702"	"16"	"0"	"0.0004568"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SRLEQEIATYR"	"[K].sRLEQEIATYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"532.29633"	"1594.87442"	"1594.87504"	"-0.38"	"-0.00020"	"9/114"	"9"	"114"	"4422563.46368408"	"HCD"	"MS2"	"19.16481"	"74.8"	"100.000"	"56.6582"	"18037"	"18037"	"18020"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"106.8"	""	"96.7"	""	"151.8"	""	"94.5"	""	"121.0"	"136.5"	""	"1035"	"33"	"37.000"	"30.000"	"0.0243730766410423"	"15"	"0"	"0.002842"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SRLEQEIATYR"	"[K].sRLEQEIATYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"797.94098"	"1594.87468"	"1594.87504"	"-0.22"	"-0.00018"	"8/114"	"8"	"114"	"506963.724975586"	"HCD"	"MS2"	"0"	"14.7"	"100.000"	"56.8331"	"18108"	"18108"	"18084"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.3"	""	"23.6"	""	"19.3"	""	"20.8"	""	"22.0"	"24.7"	""	"1046"	"35"	"37.000"	"30.000"	"0.0166150513894983"	"18"	"0"	"0.001625"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SRLEQEIATYR"	"[K].sRLEQEIATYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"532.29663"	"1594.87534"	"1594.87504"	"0.19"	"0.00010"	"9/114"	"9"	"114"	"6038627.5144043"	"HCD"	"MS2"	"14.50947"	"89.4"	"100.000"	"56.5225"	"17995"	"17995"	"17974"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"126.9"	""	"105.4"	""	"142.5"	""	"130.7"	""	"150.9"	"191.4"	""	"1037"	"45"	"37.000"	"30.000"	"0.00169726150294677"	"15"	"0"	"0.0005284"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTLSHEDHGK"	"[R].dTLSHEDHGk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"4"	"4"	"0.9375"	"0.0000"	"1"	"1"	"1"	"399.96472"	"1596.83706"	"1596.83821"	"-0.72"	"-0.00029"	"10/84"	"10"	"84"	"25436417.0262451"	"HCD"	"MS2"	"16.40043"	"338.6"	"39.321"	"22.5113"	"4188"	"4188"	"4170"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"534.0"	""	"462.4"	""	"427.6"	""	"571.3"	"4.2"	"622.4"	"584.5"	""	"924"	"32"	"36.000"	"29.000"	"0.031020013005179"	"16"	"0"	"0.0004786"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTLSHEDHGK"	"[R].dTLSHEDHGk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"532.95056"	"1596.83713"	"1596.83821"	"-0.67"	"-0.00036"	"8/84"	"8"	"84"	"14175226.3796997"	"HCD"	"MS2"	"19.18274"	"519.7"	"100.000"	"22.4932"	"4164"	"4164"	"4142"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"806.6"	""	"660.1"	""	"653.0"	""	"889.6"	""	"1025.1"	"897.4"	""	"927"	"29"	"36.000"	"29.000"	"0.0601242592101064"	"20"	"0"	"6.175E-05"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTLSHEDHGK"	"[R].dTLSHEDHGk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"4"	"4"	"0.9730"	"0.0000"	"1"	"1"	"1"	"399.96484"	"1596.83755"	"1596.83821"	"-0.41"	"-0.00017"	"11/84"	"11"	"84"	"27485032.0782471"	"HCD"	"MS2"	"10.3848"	"357.2"	"40.044"	"22.5230"	"4176"	"4176"	"4158"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"574.6"	""	"513.6"	""	"468.5"	""	"574.4"	"6.2"	"641.1"	"602.5"	""	"933"	"37"	"36.000"	"29.000"	"0.00846938056683668"	"16"	"0"	"2.451E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTLSHEDHGK"	"[R].dTLSHEDHGk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"798.92273"	"1596.83818"	"1596.83821"	"-0.01"	"-0.00001"	"12/84"	"12"	"84"	"144643.857666016"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"22.5411"	"4201"	"4201"	"4170"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.5"	""	"12.7"	""	"11.7"	""	"11.6"	""	"13.9"	"13.4"	""	"942"	"30"	"36.000"	"29.000"	"0.045816394239895"	"19"	"0"	"0.001082"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIEGTYIDK"	"[K].eAIEGTYIDk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"532.96686"	"1596.88602"	"1596.88851"	"-1.56"	"-0.00083"	"7/88"	"7"	"88"	"1885580.52026367"	"HCD"	"MS2"	"22.34599"	"47.6"	"100.000"	"69.3997"	"23198"	"23198"	"23176"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.9"	""	"43.4"	""	"108.7"	""	"60.0"	""	"99.5"	"89.4"	""	"932"	"22"	"36.000"	"29.000"	"0.326126370137059"	"14"	"0.001374"	"0.01754"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIEGTYIDK"	"[K].eAIEGTYIDk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"798.94769"	"1596.88811"	"1596.88851"	"-0.25"	"-0.00020"	"8/88"	"8"	"88"	"188160.122314453"	"HCD"	"MS2"	"0"	"16.0"	"100.000"	"69.7701"	"23335"	"23335"	"23314"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.3"	""	"20.3"	""	"25.7"	""	"28.6"	""	"31.5"	"28.7"	""	"937"	"54"	"36.000"	"29.000"	"0.000199392856553159"	""	"0"	"0.0003367"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIEGTYIDK"	"[K].eAIEGTYIDk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"798.94769"	"1596.88811"	"1596.88851"	"-0.25"	"-0.00020"	"6/88"	"6"	"88"	"193377.815856934"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"69.6095"	"23283"	"23283"	"23262"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.0"	""	"30.7"	""	"25.0"	""	"28.1"	""	"32.4"	"26.8"	""	"937"	"26"	"36.000"	"29.000"	"0.126389092410044"	"28"	"0.001465"	"0.01827"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIEGTYIDK"	"[K].eAIEGTYIDk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"798.94769"	"1596.88811"	"1596.88851"	"-0.25"	"-0.00020"	"16/88"	"16"	"88"	"369146.050842285"	"HCD"	"MS2"	"0"	"34.8"	"100.000"	"69.2960"	"23156"	"23156"	"23129"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.9"	""	"42.4"	""	"51.9"	""	"58.5"	"2.0"	"62.0"	"59.1"	""	"937"	"58"	"36.000"	"29.000"	"7.30650347574428E-05"	""	"0"	"1.602E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIEGTYIDK"	"[K].eAIEGTYIDk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"798.94830"	"1596.88933"	"1596.88851"	"0.51"	"0.00041"	"15/88"	"15"	"88"	"328317.245483398"	"HCD"	"MS2"	"0"	"31.1"	"100.000"	"69.4405"	"23201"	"23201"	"23171"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.7"	""	"39.6"	""	"38.9"	""	"58.3"	"1.5"	"64.8"	"47.0"	""	"931"	"56"	"36.000"	"29.000"	"0.000107132116600366"	""	"0"	"0.0003162"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISQEQMQEFR"	"[K].gISQEQmQEFR.[A]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"799.39374"	"1597.78020"	"1597.78417"	"-2.49"	"-0.00199"	"7/106"	"7"	"106"	"254469.922180176"	"HCD"	"MS2"	"0"	"16.1"	"100.000"	"41.7089"	"11965"	"11965"	"11937"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.2"	""	"19.8"	""	"17.2"	""	"28.9"	""	"33.4"	"35.8"	""	"648"	"28"	"35.000"	"28.000"	"0.0520648965976172"	"14"	"0.0001301"	"0.004879"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISQEQMQEFR"	"[K].gISQEQmQEFR.[A]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"799.39398"	"1597.78069"	"1597.78417"	"-2.18"	"-0.00174"	"7/106"	"7"	"106"	"317789.759277344"	"HCD"	"MS2"	"0"	"18.1"	"100.000"	"41.8542"	"12014"	"12014"	"11986"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.1"	""	"19.3"	""	"22.1"	""	"31.3"	""	"38.5"	"36.8"	""	"647"	"17"	"35.000"	"28.000"	"0.607958990235858"	"14"	"0.000936"	"0.01327"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNRPSEGPLQTR"	"[K].nNRPSEGPLQTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"533.29144"	"1597.85978"	"1597.86078"	"-0.63"	"-0.00034"	"14/122"	"14"	"122"	"17022298.361084"	"HCD"	"MS2"	"2.238104"	"347.0"	"100.000"	"23.1286"	"4441"	"4441"	"4421"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"473.3"	""	"372.3"	""	"376.3"	""	"633.8"	""	"710.7"	"733.1"	""	"918"	"28"	"36.000"	"29.000"	"0.0682044459809735"	"19"	"0"	"2.953E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNRPSEGPLQTR"	"[K].nNRPSEGPLQTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"799.43372"	"1597.86016"	"1597.86078"	"-0.39"	"-0.00031"	"8/122"	"8"	"122"	"779889.803466797"	"HCD"	"MS2"	"0"	"18.0"	"100.000"	"23.1446"	"4448"	"4448"	"4421"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.8"	""	"18.2"	""	"21.4"	""	"30.9"	""	"37.1"	"40.0"	""	"910"	"46"	"36.000"	"29.000"	"0.0011041075932625"	"27"	"0"	"0.003329"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNRPSEGPLQTR"	"[K].nNRPSEGPLQTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"533.29175"	"1597.86069"	"1597.86078"	"-0.06"	"-0.00003"	"14/122"	"14"	"122"	"14491376.8378296"	"HCD"	"MS2"	"2.941195"	"283.1"	"100.000"	"23.1654"	"4439"	"4439"	"4415"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"415.2"	"3.2"	"317.1"	""	"319.0"	""	"487.7"	"2.5"	"569.4"	"572.9"	""	"910"	"29"	"36.000"	"29.000"	"0.0545772182932968"	"19"	"0"	"3.755E-05"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNRPSEGPLQTR"	"[K].nNRPSEGPLQTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"799.43420"	"1597.86113"	"1597.86078"	"0.22"	"0.00017"	"7/122"	"7"	"122"	"611440.976257324"	"HCD"	"MS2"	"0"	"14.2"	"100.000"	"23.2550"	"4476"	"4476"	"4447"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.5"	""	"14.5"	""	"18.0"	""	"23.2"	""	"26.2"	"28.8"	""	"908"	"30"	"36.000"	"29.000"	"0.0472123755286393"	"25"	"0.003449"	"0.03461"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLLQVEDERR"	"[K].dVLLQVEDERR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"1"	"3"	"3"	"0.6842"	"0.0000"	"1"	"1"	"1"	"534.29980"	"1600.88486"	"1600.88560"	"-0.46"	"-0.00025"	"6/108"	"6"	"108"	"661257.675170898"	"HCD"	"MS2"	"5.728715"	"21.4"	"100.000"	"61.1883"	"19864"	"19864"	"19842"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.2"	""	"22.6"	""	"23.0"	""	"35.3"	"0.2"	"53.8"	"44.2"	""	"997"	"19"	"36.000"	"29.000"	"0.606268721322215"	"20"	"0.002973"	"0.02921"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTYTEDGQTK"	"[R].tTYTEDGQTk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"801.42462"	"1601.84197"	"1601.84229"	"-0.20"	"-0.00016"	"12/92"	"12"	"92"	"376704.613647461"	"HCD"	"MS2"	"28.34553"	"33.1"	"100.000"	"35.0804"	"9267"	"9267"	"9239"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.6"	""	"32.4"	""	"40.8"	""	"59.4"	"0.0"	"71.0"	"62.1"	""	"888"	"35"	"36.000"	"29.000"	"0.0131335753514889"	"17"	"0"	"0.00157"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTYTEDGQTK"	"[R].tTYTEDGQTk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"801.42480"	"1601.84233"	"1601.84229"	"0.03"	"0.00002"	"7/92"	"7"	"92"	"325155.373596191"	"HCD"	"MS2"	"24.4239"	"27.3"	"100.000"	"35.0373"	"9255"	"9255"	"9226"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.7"	""	"26.5"	""	"34.9"	""	"55.2"	""	"52.2"	"58.0"	""	"890"	"40"	"36.000"	"29.000"	"0.00467046380750284"	"15"	"0"	"0.001127"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTTPAEPPFEGR"	"[R].gDTTPAEPPFEGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"801.90118"	"1602.79509"	"1602.79612"	"-0.64"	"-0.00051"	"11/114"	"11"	"114"	"225478.8671875"	"HCD"	"MS2"	"0"	"15.3"	"100.000"	"51.3491"	"15887"	"15887"	"15861"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.1"	""	"16.6"	""	"19.3"	""	"26.8"	""	"34.2"	"30.2"	""	"633"	"19"	"35.000"	"28.000"	"0.395706983063908"	"19"	"0.0003538"	"0.00609"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTTPAEPPFEGR"	"[R].gDTTPAEPPFEGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"801.90167"	"1602.79607"	"1602.79612"	"-0.03"	"-0.00002"	"11/114"	"11"	"114"	"824440.565551758"	"HCD"	"MS2"	"0"	"40.1"	"100.000"	"51.0335"	"15758"	"15758"	"15739"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.6"	""	"46.1"	""	"56.2"	""	"62.3"	""	"83.4"	"87.1"	""	"636"	"51"	"35.000"	"28.000"	"0.000280173541616549"	"21"	"0"	"0.0001756"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTTPAEPPFEGR"	"[R].gDTTPAEPPFEGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"801.90204"	"1602.79680"	"1602.79612"	"0.43"	"0.00034"	"5/114"	"5"	"114"	"936171.394287109"	"HCD"	"MS2"	"9.528228"	"51.6"	"100.000"	"51.3888"	"15892"	"15892"	"15869"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.9"	""	"60.3"	""	"60.6"	""	"93.8"	""	"109.6"	"113.1"	""	"657"	"22"	"35.000"	"28.000"	"0.197940824025427"	"16"	"0.0008629"	"0.009506"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].TVmGDFAQFVDk.[C]"	"M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"801.90411"	"1602.80095"	"1602.80351"	"-1.60"	"-0.00128"	"5/116"	"5"	"116"	"118054.741210938"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"88.2604"	"30751"	"30751"	"30741"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.7"	""	"9.0"	""	"7.3"	""	"15.5"	""	"15.1"	"11.9"	""	"687"	"25"	"35.000"	"28.000"	"0.115060628350714"	"24"	"0.002379"	"0.02471"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].TVmGDFAQFVDk.[C]"	"M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"801.90460"	"1602.80193"	"1602.80351"	"-0.99"	"-0.00079"	"6/116"	"6"	"116"	"128853.491333008"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"88.2487"	"30742"	"30742"	"30736"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.7"	""	"9.4"	""	"7.3"	""	"14.2"	""	"11.9"	"11.2"	""	"691"	"42"	"35.000"	"28.000"	"0.00202977571299038"	"26"	"0.000936"	"0.01233"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].TVmGDFAQFVDk.[C]"	"M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"801.90491"	"1602.80254"	"1602.80351"	"-0.61"	"-0.00049"	"6/116"	"6"	"116"	"162422.989440918"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"88.5208"	"30845"	"30845"	"30835"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.9"	""	"13.2"	""	"11.9"	""	"10.7"	""	"13.1"	"11.2"	""	"686"	"39"	"35.000"	"28.000"	"0.00432806844364599"	"24"	"0.0002479"	"0.005504"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].TVmGDFAQFVDk.[C]"	"M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"801.90503"	"1602.80278"	"1602.80351"	"-0.45"	"-0.00036"	"7/116"	"7"	"116"	"183814.623168945"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"88.5398"	"30855"	"30855"	"30845"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.3"	""	"10.7"	""	"10.3"	""	"17.8"	""	"16.5"	"14.6"	""	"694"	"50"	"35.000"	"28.000"	"0.000365872253047767"	"21"	"0"	"0.001426"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].TVmGDFAQFVDk.[C]"	"M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"801.90503"	"1602.80278"	"1602.80351"	"-0.45"	"-0.00036"	"6/116"	"6"	"116"	"196058.157836914"	"HCD"	"MS2"	"100"	"13.6"	"100.000"	"89.1940"	"31106"	"31106"	"31092"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.7"	""	"21.2"	""	"18.7"	""	"24.0"	""	"27.9"	"18.0"	""	"694"	"26"	"35.000"	"28.000"	"0.094913824802843"	"23"	"0.0008629"	"0.01012"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].TVmGDFAQFVDk.[C]"	"M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"801.90576"	"1602.80425"	"1602.80351"	"0.46"	"0.00037"	"8/116"	"8"	"116"	"219186.740966797"	"HCD"	"MS2"	"7.211355"	"9.7"	"100.000"	"89.1936"	"31104"	"31104"	"31085"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.2"	""	"15.7"	""	"13.0"	""	"24.6"	""	"18.8"	"10.1"	""	"708"	"62"	"35.000"	"28.000"	"2.30145910381454E-05"	"21"	"0"	"0.0008693"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].TVmGDFAQFVDk.[C]"	"M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"801.90582"	"1602.80437"	"1602.80351"	"0.54"	"0.00043"	"7/116"	"7"	"116"	"139788.923156738"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"89.4840"	"31217"	"31217"	"31205"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.4"	""	"8.1"	""	"10.8"	""	"16.7"	""	"14.9"	"10.9"	""	"708"	"40"	"35.000"	"28.000"	"0.00394460264891472"	"24"	"0.0006732"	"0.009205"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].TVmGDFAQFVDk.[C]"	"M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"801.90594"	"1602.80461"	"1602.80351"	"0.69"	"0.00055"	"7/116"	"7"	"116"	"122156.946533203"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"89.4600"	"31207"	"31207"	"31197"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.9"	""	"7.0"	""	"6.5"	""	"13.8"	""	"8.5"	"9.1"	""	"712"	"38"	"35.000"	"28.000"	"0.00525351525846219"	"24"	"0.0002479"	"0.005179"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDGIVPDIAVGTK"	"[-].mDGIVPDIAVGTk.[R]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9623"	"0.0000"	"1"	"1"	"1"	"801.93243"	"1602.85759"	"1602.86103"	"-2.14"	"-0.00172"	"12/116"	"12"	"116"	"141038.325500488"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"106.0463"	"36854"	"36854"	"36842"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.8"	""	"3.8"	""	"5.2"	""	"13.6"	""	"6.6"	"7.7"	""	"1010"	"53"	"37.000"	"30.000"	"0.000250202346356419"	"18"	"0"	"8.125E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDGIVPDIAVGTK"	"[-].mDGIVPDIAVGTk.[R]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"801.93311"	"1602.85893"	"1602.86103"	"-1.30"	"-0.00105"	"11/116"	"11"	"116"	"312543.23614502"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"106.0522"	"36926"	"36926"	"36907"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.0"	""	"7.5"	""	"7.0"	""	"25.5"	""	"13.2"	"12.6"	""	"1064"	"57"	"37.000"	"30.000"	"0.000114264581223744"	"16"	"0"	"0.0001731"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDGIVPDIAVGTK"	"[-].mDGIVPDIAVGTk.[R]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"801.93359"	"1602.85991"	"1602.86103"	"-0.70"	"-0.00056"	"6/116"	"6"	"116"	"85224.6043701172"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"106.3131"	"36952"	"36952"	"36942"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.3"	""	"4.4"	""	"5.4"	""	"7.7"	""	"8.7"	"4.7"	""	"1069"	"23"	"37.000"	"30.000"	"0.255827784346451"	"14"	"0.0002479"	"0.005364"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAMQYASESK"	"[K].dAmQYASESk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"802.40564"	"1603.80400"	"1603.80379"	"0.13"	"0.00010"	"15/100"	"15"	"100"	"199199.763061523"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"38.7589"	"10755"	"10755"	"10725"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.4"	""	"13.7"	""	"11.9"	""	"36.0"	""	"28.3"	"33.0"	""	"711"	"41"	"35.000"	"28.000"	"0.00281734222985808"	"24"	"0.0006732"	"0.008359"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAMQYASESK"	"[K].dAmQYASESk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"802.40570"	"1603.80412"	"1603.80379"	"0.21"	"0.00017"	"7/100"	"7"	"100"	"208831.06036377"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"38.5234"	"10668"	"10668"	"10645"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.2"	""	"10.6"	""	"16.8"	""	"38.5"	""	"40.0"	"39.6"	""	"711"	"31"	"35.000"	"28.000"	"0.0277868684531151"	"14"	"0.006189"	"0.07028"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DFLPVDPASSNGR"	"[K].dFLPVDPASSNGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64604"	"Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1"	"Q64604"	"Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"802.41864"	"1603.83000"	"1603.82775"	"1.40"	"0.00113"	"4/118"	"4"	"118"	"107255.25390625"	"HCD"	"MS2"	"26.41917"	"5.4"	"100.000"	"79.5132"	"27284"	"27284"	"27258"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.8"	""	"6.1"	""	"8.9"	""	"8.3"	""	"10.1"	"8.8"	""	"926"	"17"	"36.000"	"29.000"	"0.858185141641057"	"21"	"0.001886"	"0.02101"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DFLPVDPSASNGR"	"[].dFLPVDPSASNGR.[]"	"N-Term(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"802.41864"	"1603.83000"	"1603.82775"	"1.40"	"0.00113"	"4/118"	"4"	"118"	"107255.25390625"	"HCD"	"MS2"	"26.41917"	"5.4"	"100.000"	"79.5132"	"27284"	"27284"	"27258"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.8"	""	"6.1"	""	"8.9"	""	"8.3"	""	"10.1"	"8.8"	""	"926"	"17"	"36.000"	"29.000"	"0.858185141641057"	"21"	"0.001886"	"0.02101"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANNVDYTVHSVR"	"[K].aNNVDYTVHSVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"535.28491"	"1603.84018"	"1603.83898"	"0.75"	"0.00040"	"11/118"	"11"	"118"	"1764164.39245605"	"HCD"	"MS2"	"55.68683"	"45.6"	"100.000"	"36.0883"	"9677"	"9677"	"9658"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.7"	""	"51.9"	""	"67.7"	""	"72.5"	"0.9"	"92.2"	"93.8"	""	"1006"	"22"	"37.000"	"30.000"	"0.331564469307894"	"15"	"0"	"0.0006377"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVINSGNGTVEDR"	"[K].lVINSGnGTVEDR.[K]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P26051"	"CD44 antigen OS=Rattus norvegicus OX=10116 GN=Cd44 PE=1 SV=2"	"P26051"	"CD44 antigen OS=Rattus norvegicus OX=10116 GN=Cd44 PE=1 SV=2"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"802.42761"	"1603.84795"	"1603.84888"	"-0.58"	"-0.00047"	"5/128"	"5"	"128"	"169209.373291016"	"HCD"	"MS2"	"42.68421"	"13.8"	"100.000"	"60.9740"	"19777"	"19777"	"19753"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.9"	""	"14.8"	""	"16.0"	""	"24.8"	""	"26.0"	"31.5"	""	"1052"	"11"	"37.000"	"30.000"	"4.0549522472789"	"17"	"0.001036"	"0.0136"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVINSGNGTVEDR"	"[K].lVINSGnGTVEDR.[K]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P26051"	"CD44 antigen OS=Rattus norvegicus OX=10116 GN=Cd44 PE=1 SV=2"	"P26051"	"CD44 antigen OS=Rattus norvegicus OX=10116 GN=Cd44 PE=1 SV=2"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"1"	"802.42761"	"1603.84795"	"1603.84888"	"-0.58"	"-0.00047"	"4/128"	"4"	"128"	"214915.418151855"	"HCD"	"MS2"	"33.62649"	"17.6"	"100.000"	"61.2013"	"19854"	"19854"	"19829"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.2"	""	"20.8"	""	"23.9"	""	"31.8"	""	"30.4"	"32.5"	""	"1052"	"18"	"37.000"	"30.000"	"0.835575589762433"	"26"	"0.000936"	"0.01257"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEPSEAVGEK"	"[R].aEEPSEAVGEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"802.43231"	"1603.85735"	"1603.85794"	"-0.37"	"-0.00030"	"17/96"	"17"	"96"	"747784.596923828"	"HCD"	"MS2"	"0"	"59.2"	"100.000"	"42.8405"	"12427"	"12427"	"12403"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"51.5"	""	"42.3"	""	"52.3"	""	"141.4"	""	"151.2"	"130.3"	""	"1107"	"72"	"37.000"	"30.000"	"3.71635870094514E-06"	"29"	"0"	"1.056E-06"	"1.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEPSEAVGEK"	"[R].aEEPSEAVGEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"0"	"2"	"2"	"0.8871"	"0.0000"	"1"	"1"	"1"	"802.43341"	"1603.85954"	"1603.85794"	"1.00"	"0.00080"	"9/96"	"9"	"96"	"787033.96270752"	"HCD"	"MS2"	"0"	"62.3"	"100.000"	"42.9696"	"12469"	"12469"	"12444"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.7"	""	"44.2"	""	"50.3"	""	"130.1"	"1.8"	"181.4"	"129.4"	""	"1104"	"62"	"37.000"	"30.000"	"3.11127986015927E-05"	"24"	"0"	"2.921E-06"	"1.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDVEALDQK"	"[R].vEDVEALDQk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.6119"	"0.0000"	"1"	"1"	"1"	"802.45038"	"1603.89348"	"1603.89432"	"-0.53"	"-0.00042"	"9/86"	"9"	"86"	"616654.835754395"	"HCD"	"MS2"	"9.537282"	"50.4"	"100.000"	"75.1171"	"25506"	"25506"	"25489"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"105.5"	""	"85.2"	""	"81.6"	""	"59.4"	"0.6"	"70.5"	"72.2"	""	"1092"	"67"	"37.000"	"30.000"	"1.02610698197458E-05"	""	"0"	"5.978E-06"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDVEALDQK"	"[R].vEDVEALDQk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"802.45050"	"1603.89372"	"1603.89432"	"-0.37"	"-0.00030"	"8/86"	"8"	"86"	"581010.833312988"	"HCD"	"MS2"	"6.360531"	"49.0"	"100.000"	"74.9875"	"25464"	"25464"	"25446"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"110.8"	""	"78.3"	""	"78.9"	""	"60.7"	"0.8"	"67.8"	"64.4"	""	"1111"	"51"	"37.000"	"30.000"	"0.00044635876087411"	""	"0"	"3.455E-05"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDVEALDQK"	"[R].vEDVEALDQk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.6515"	"0.0000"	"1"	"1"	"1"	"802.45074"	"1603.89421"	"1603.89432"	"-0.07"	"-0.00006"	"9/86"	"9"	"86"	"206726.836914063"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"74.8300"	"25394"	"25394"	"25374"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.5"	""	"30.0"	""	"20.8"	""	"22.3"	""	"24.5"	"23.7"	""	"1111"	"66"	"37.000"	"30.000"	"1.50551145151536E-05"	""	"0"	"4.142E-05"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDVEALDQK"	"[R].vEDVEALDQk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"802.45087"	"1603.89446"	"1603.89432"	"0.08"	"0.00007"	"8/86"	"8"	"86"	"273438.019470215"	"HCD"	"MS2"	"0"	"22.1"	"100.000"	"74.6976"	"25353"	"25353"	"25335"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.2"	""	"36.3"	""	"37.9"	""	"25.2"	""	"29.7"	"26.7"	""	"1113"	"44"	"37.000"	"30.000"	"0.00233058618988122"	""	"0"	"0.000325"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TENGGWTVIQNR"	"[K].tEnGGWTVIQNR.[Q]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"802.91400"	"1604.82073"	"1604.82300"	"-1.42"	"-0.00114"	"5/118"	"5"	"118"	"172877.977416992"	"HCD"	"MS2"	"0"	"14.5"	"100.000"	"65.2177"	"21494"	"21494"	"21469"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.2"	""	"17.6"	""	"14.4"	""	"30.9"	""	"31.4"	"23.7"	""	"959"	"19"	"36.000"	"29.000"	"0.648318794051655"	"18"	"0.005119"	"0.05824"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TENGGWTVIQNR"	"[K].tEnGGWTVIQNR.[Q]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"802.91412"	"1604.82097"	"1604.82300"	"-1.26"	"-0.00101"	"6/118"	"6"	"118"	"155978.27331543"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"65.2331"	"21485"	"21485"	"21454"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.9"	""	"14.5"	""	"11.4"	""	"16.9"	""	"26.5"	"24.7"	""	"973"	"22"	"36.000"	"29.000"	"0.317748013862995"	"20"	"0.003967"	"0.04242"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TENGGWTVIQNR"	"[K].tEnGGWTVIQNR.[Q]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"802.91418"	"1604.82109"	"1604.82300"	"-1.19"	"-0.00095"	"5/118"	"5"	"118"	"247191.758056641"	"HCD"	"MS2"	"0"	"17.7"	"100.000"	"67.2444"	"22320"	"22320"	"22300"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.2"	""	"22.1"	""	"18.2"	""	"34.7"	""	"28.3"	"27.8"	""	"969"	"9"	"36.000"	"29.000"	"6.1135544050918"	"13"	"0.008777"	"0.1137"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TENGGWTVIQNR"	"[K].tEnGGWTVIQNR.[Q]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"802.91461"	"1604.82195"	"1604.82300"	"-0.66"	"-0.00053"	"7/118"	"7"	"118"	"365816.396362305"	"HCD"	"MS2"	"27.25518"	"21.3"	"100.000"	"67.0447"	"22224"	"22224"	"22195"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.9"	""	"18.1"	""	"19.3"	""	"42.7"	""	"54.6"	"33.2"	""	"971"	"41"	"36.000"	"29.000"	"0.00376001202833123"	"25"	"0"	"8.293E-05"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TENGGWTVIQNR"	"[K].tEnGGWTVIQNR.[Q]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"802.91473"	"1604.82219"	"1604.82300"	"-0.50"	"-0.00040"	"18/118"	"18"	"118"	"402451.256469727"	"HCD"	"MS2"	"14.64931"	"22.4"	"100.000"	"66.9350"	"22194"	"22194"	"22172"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.7"	""	"23.4"	""	"17.4"	""	"50.2"	""	"45.4"	"40.6"	""	"967"	"39"	"36.000"	"29.000"	"0.00675144102570547"	"21"	"0"	"0.0001094"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TENGGWTVIQNR"	"[K].tEnGGWTVIQNR.[Q]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"802.91504"	"1604.82280"	"1604.82300"	"-0.12"	"-0.00010"	"7/118"	"7"	"118"	"324544.604675293"	"HCD"	"MS2"	"0"	"19.5"	"100.000"	"67.3333"	"22341"	"22341"	"22322"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.5"	""	"20.8"	""	"20.7"	""	"32.2"	""	"42.2"	"32.3"	""	"968"	"43"	"36.000"	"29.000"	"0.00247084419988097"	"27"	"0"	"2.309E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQESADELQK"	"[R].vQESADELQk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P84083"	"ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P84083"	"ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"802.94574"	"1604.88420"	"1604.88957"	"-3.35"	"-0.00268"	"9/96"	"9"	"96"	"252087.403442383"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"52.6834"	"16432"	"16432"	"16408"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.2"	""	"28.0"	""	"36.7"	""	"33.0"	""	"38.3"	"27.8"	""	"1090"	"45"	"37.000"	"30.000"	"0.00187670712266019"	"21"	"0"	"0.0003992"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQESADELQK"	"[R].vQESADELQk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P84083"	"ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P84083"	"ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"3"	"3"	"0.6889"	"0.0000"	"1"	"1"	"1"	"535.63422"	"1604.88810"	"1604.88957"	"-0.92"	"-0.00049"	"8/96"	"8"	"96"	"1336842.26104736"	"HCD"	"MS2"	"12.27632"	"40.5"	"100.000"	"53.0917"	"16587"	"16587"	"16563"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"71.0"	""	"54.4"	""	"57.5"	""	"63.6"	""	"73.7"	"63.2"	""	"1081"	"45"	"37.000"	"30.000"	"0.00154097537358586"	"29"	"0"	"0.000287"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQESADELQK"	"[R].vQESADELQk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P84083"	"ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P84083"	"ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"802.94775"	"1604.88823"	"1604.88957"	"-0.84"	"-0.00067"	"8/96"	"8"	"96"	"266903.010986328"	"HCD"	"MS2"	"0"	"21.9"	"100.000"	"52.9903"	"16546"	"16546"	"16517"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.8"	""	"28.4"	""	"30.3"	""	"38.6"	""	"35.5"	"35.9"	""	"1081"	"46"	"37.000"	"30.000"	"0.0015163368813129"	"26"	"0.0003538"	"0.006158"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEMVESmk.[K]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"803.39587"	"1605.78447"	"1605.79045"	"-3.72"	"-0.00299"	"4/74"	"4"	"74"	"229302.986450195"	"HCD"	"MS2"	"33.96868"	"21.3"	"100.000"	"59.4029"	"19156"	"19156"	"19126"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.7"	""	"26.1"	""	"24.1"	""	"35.6"	""	"41.8"	"47.3"	""	"621"	"16"	"34.000"	"27.000"	"0.776357234806742"	"14"	"0.004942"	"0.05431"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEmVESMk.[K]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"803.39667"	"1605.78606"	"1605.79045"	"-2.74"	"-0.00220"	"5/74"	"5"	"74"	"415106.010742188"	"HCD"	"MS2"	"0"	"36.5"	"100.000"	"60.6219"	"19619"	"19619"	"19605"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.1"	""	"35.0"	""	"46.1"	""	"64.8"	""	"77.8"	"83.0"	""	"665"	"19"	"35.000"	"28.000"	"0.426374918733127"	"14"	"0.00912"	"0.1184"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEMVESmk.[K]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"803.39716"	"1605.78703"	"1605.79045"	"-2.13"	"-0.00171"	"7/74"	"7"	"74"	"356793.601013184"	"HCD"	"MS2"	"0"	"30.8"	"100.000"	"59.2422"	"19105"	"19105"	"19085"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.3"	""	"36.0"	""	"39.5"	""	"47.8"	""	"55.9"	"70.1"	""	"666"	"20"	"35.000"	"28.000"	"0.350303303983133"	"18"	"0.00599"	"0.06935"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEmVESMk.[K]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"803.39771"	"1605.78813"	"1605.79045"	"-1.44"	"-0.00116"	"12/74"	"12"	"74"	"561877.538146973"	"HCD"	"MS2"	"47.87739"	"45.0"	"100.000"	"60.4587"	"19568"	"19568"	"19551"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.8"	""	"50.7"	""	"50.0"	""	"72.1"	""	"100.7"	"106.4"	""	"671"	"15"	"35.000"	"28.000"	"1.01319380219488"	"19"	"0.00736"	"0.08607"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEmVESMk.[K]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"803.39813"	"1605.78899"	"1605.79045"	"-0.91"	"-0.00073"	"13/74"	"13"	"74"	"339673.110351563"	"HCD"	"MS2"	"0"	"29.5"	"100.000"	"59.0184"	"18999"	"18999"	"18968"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.3"	""	"40.8"	""	"43.0"	""	"46.3"	"2.3"	"52.2"	"62.1"	""	"669"	"27"	"35.000"	"28.000"	"0.0708591799740624"	"21"	"0.003507"	"0.0368"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEmVESMk.[K]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"803.39862"	"1605.78996"	"1605.79045"	"-0.30"	"-0.00024"	"8/74"	"8"	"74"	"485273.109802246"	"HCD"	"MS2"	"0"	"46.2"	"100.000"	"58.8324"	"18938"	"18938"	"18911"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.6"	""	"54.1"	""	"66.0"	""	"76.8"	"3.1"	"86.0"	"95.8"	""	"676"	"39"	"35.000"	"28.000"	"0.00453854556864598"	"25"	"0.002973"	"0.02877"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATSWGSILQDEK"	"[M].aTSWGSILQDEk.[Q]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"803.41919"	"1605.83110"	"1605.83217"	"-0.66"	"-0.00053"	"4/112"	"4"	"112"	"80098.251953125"	"HCD"	"MS2"	"44.34354"	"4.4"	"100.000"	"108.8684"	"37988"	"37988"	"37981"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.3"	""	"5.0"	""	"4.9"	""	"9.0"	""	"6.1"	"7.2"	""	"950"	"14"	"36.000"	"29.000"	"1.83947381337768"	"23"	"0.007752"	"0.09523"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLRR"	"[R].mSVEADINGLRR.[V]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"535.95691"	"1605.85617"	"1605.85801"	"-1.14"	"-0.00061"	"14/104"	"14"	"104"	"3570171.51763916"	"HCD"	"MS2"	"36.05434"	"66.4"	"100.000"	"51.4649"	"15923"	"15923"	"15899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"108.8"	""	"91.6"	""	"111.3"	""	"98.6"	""	"106.4"	"111.2"	""	"1058"	"30"	"37.000"	"30.000"	"0.0547590206173372"	"15"	"0"	"0.0008843"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLRR"	"[R].mSVEADINGLRR.[V]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"535.95740"	"1605.85764"	"1605.85801"	"-0.23"	"-0.00012"	"17/104"	"17"	"104"	"3643877.2822876"	"HCD"	"MS2"	"29.16306"	"69.5"	"100.000"	"51.1417"	"15802"	"15802"	"15783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"115.0"	""	"92.0"	""	"106.3"	""	"123.1"	"1.1"	"95.3"	"123.2"	""	"1066"	"35"	"37.000"	"30.000"	"0.0180603935222195"	"17"	"0"	"0.003562"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNPEYDYLFK"	"[-].mNPEYDYLFk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"803.88647"	"1606.76567"	"1606.76606"	"-0.24"	"-0.00020"	"6/92"	"6"	"92"	"125187.649719238"	"HCD"	"MS2"	"0"	"5.4"	"100.000"	"108.5173"	"37773"	"37773"	"37758"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.1"	""	"5.5"	""	"5.4"	""	"15.6"	""	"12.8"	"6.7"	""	"512"	"33"	"34.000"	"27.000"	"0.0137163944323415"	"15"	"0.001886"	"0.02109"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNPEYDYLFK"	"[-].mNPEYDYLFk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"803.88647"	"1606.76567"	"1606.76606"	"-0.24"	"-0.00020"	"5/92"	"5"	"92"	"430078.389587402"	"HCD"	"MS2"	"0"	"20.1"	"100.000"	"108.2391"	"37669"	"37669"	"37658"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.2"	""	"20.2"	""	"26.0"	""	"66.3"	""	"29.9"	"33.7"	""	"512"	"21"	"34.000"	"27.000"	"0.227635486171635"	"14"	"0.001374"	"0.0168"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNPEYDYLFK"	"[-].mNPEYDYLFk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"803.88672"	"1606.76616"	"1606.76606"	"0.06"	"0.00005"	"4/92"	"4"	"92"	"96125.0172119141"	"HCD"	"MS2"	"25.54527"	"2.3"	"100.000"	"109.1030"	"37983"	"37983"	"37973"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.3"	""	"4.7"	""	"4.2"	""	""	""	"4.1"	"7.6"	""	"513"	"13"	"34.000"	"27.000"	"1.21084170084111"	"14"	"0.005617"	"0.06424"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNPEYDYLFK"	"[-].mNPEYDYLFk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"803.88708"	"1606.76689"	"1606.76606"	"0.52"	"0.00042"	"5/92"	"5"	"92"	"93389.4486083984"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"108.5158"	"37862"	"37862"	"37845"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.0"	""	"6.1"	""	"6.3"	""	"10.9"	""	"6.6"	"7.1"	""	"522"	"21"	"34.000"	"27.000"	"0.191708119589007"	"16"	"0.001886"	"0.0219"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNPEYDYLFK"	"[-].mNPEYDYLFk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"803.88708"	"1606.76689"	"1606.76606"	"0.52"	"0.00042"	"4/92"	"4"	"92"	"161554.899047852"	"HCD"	"MS2"	"41.75864"	"3.2"	"100.000"	"108.9617"	"38023"	"38023"	"38015"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.4"	""	"2.5"	""	"6.1"	""	"4.9"	""	"6.8"	"5.0"	""	"522"	"10"	"34.000"	"27.000"	"2.57418945749746"	"14"	"0.008777"	"0.1139"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNPEYDYLFK"	"[-].mNPEYDYLFk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.9701"	"0.0000"	"1"	"1"	"1"	"803.88721"	"1606.76714"	"1606.76606"	"0.67"	"0.00054"	"8/92"	"8"	"92"	"692562.988525391"	"HCD"	"MS2"	"0"	"30.9"	"100.000"	"108.2042"	"37741"	"37741"	"37722"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.1"	""	"37.0"	""	"41.9"	""	"81.0"	"1.1"	"57.3"	"49.3"	""	"534"	"67"	"34.000"	"27.000"	"5.80111214756621E-06"	"18"	"0"	"0.002108"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGQLGLNDENDR"	"[K].fGQLGLNDENDR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQN1"	"Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus OX=10116 GN=Herc4 PE=2 SV=1"	"Q5PQN1"	"Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus OX=10116 GN=Herc4 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"803.90588"	"1606.80449"	"1606.80226"	"1.39"	"0.00111"	"4/112"	"4"	"112"	"128134.469909668"	"HCD"	"MS2"	"17.36775"	"10.5"	"100.000"	"72.5126"	"24453"	"24453"	"24425"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.6"	""	"13.0"	""	"11.1"	""	"20.4"	""	"17.2"	"23.4"	""	"753"	"7"	"35.000"	"28.000"	"8.01244350812491"	"13"	"0.007018"	"0.08152"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"803.92023"	"1606.83318"	"1606.83481"	"-1.02"	"-0.00082"	"5/102"	"5"	"102"	"78690.362121582"	"HCD"	"MS2"	"8.765504"	"3.2"	"100.000"	"103.4748"	"36025"	"36025"	"36020"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.7"	""	"4.1"	""	"3.4"	""	"2.7"	""	"4.9"	"10.2"	""	"972"	"23"	"36.000"	"29.000"	"0.226274841452158"	"15"	"0.00736"	"0.08731"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.9778"	"0.0000"	"1"	"1"	"1"	"803.92084"	"1606.83440"	"1606.83481"	"-0.26"	"-0.00021"	"8/102"	"8"	"102"	"236548.889770508"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"103.7337"	"36088"	"36088"	"36083"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.4"	""	"7.7"	""	"9.5"	""	"3.7"	""	"16.5"	"14.2"	""	"978"	"45"	"36.000"	"29.000"	"0.00164933493934187"	"17"	"0"	"0.0009754"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"803.92145"	"1606.83562"	"1606.83481"	"0.50"	"0.00040"	"5/102"	"5"	"102"	"83661.9071655273"	"HCD"	"MS2"	"9.561296"	"3.4"	"100.000"	"103.4382"	"36081"	"36081"	"36073"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.8"	""	"8.3"	""	"4.4"	""	"2.7"	""	"6.3"	"5.9"	""	"1018"	"18"	"37.000"	"30.000"	"0.854511245224383"	"16"	"0.002973"	"0.02851"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"803.92157"	"1606.83586"	"1606.83481"	"0.65"	"0.00053"	"6/102"	"6"	"102"	"147772.154541016"	"HCD"	"MS2"	"6.586379"	"5.4"	"100.000"	"103.6995"	"36148"	"36148"	"36144"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.9"	""	"9.5"	""	"5.7"	""	"5.2"	""	"10.7"	"12.5"	""	"1023"	"34"	"37.000"	"30.000"	"0.0202230026164847"	"15"	"0.0002479"	"0.005638"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDSETGENIR"	"[R].kDSETGENIR.[Q]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"1"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"536.29791"	"1606.87918"	"1606.88007"	"-0.55"	"-0.00030"	"9/100"	"9"	"100"	"4140914.42010498"	"HCD"	"MS2"	"8.458081"	"162.2"	"100.000"	"26.1263"	"5646"	"5646"	"5631"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"354.3"	""	"195.8"	""	"230.2"	""	"220.5"	""	"266.3"	"267.8"	""	"1091"	"19"	"37.000"	"30.000"	"0.686743812133717"	"15"	"0.001211"	"0.01415"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDSETGENIR"	"[R].kDSETGENIR.[Q]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"1"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"536.29822"	"1606.88010"	"1606.88007"	"0.02"	"0.00001"	"9/100"	"9"	"100"	"4473978.42388916"	"HCD"	"MS2"	"16.0828"	"178.0"	"100.000"	"26.2026"	"5661"	"5661"	"5647"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"397.4"	""	"234.7"	""	"242.3"	""	"237.6"	""	"286.9"	"282.3"	""	"1122"	"22"	"37.000"	"30.000"	"0.320599515172918"	"17"	"0.0003538"	"0.007289"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGnFGPGPGSNFR.[G]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"3"	"804.38892"	"1607.77056"	"1607.77638"	"-3.63"	"-0.00291"	"5/132"	"5"	"132"	"301034.681335449"	"HCD"	"MS2"	"15.52308"	"25.9"	"100.000"	"53.4966"	"16753"	"16753"	"16722"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.1"	""	"31.1"	""	"29.7"	""	"43.7"	"1.3"	"56.5"	"53.0"	""	"523"	"7"	"34.000"	"27.000"	"5.51406261207555"	"16"	"0.004069"	"0.04428"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGnFGPGPGSNFR.[G]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"804.38971"	"1607.77214"	"1607.77638"	"-2.64"	"-0.00212"	"4/132"	"4"	"132"	"333136.386108398"	"HCD"	"MS2"	"32.31419"	"26.0"	"100.000"	"53.2221"	"16652"	"16652"	"16622"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.1"	""	"34.1"	""	"33.4"	""	"50.7"	""	"47.7"	"46.5"	""	"525"	"5"	"34.000"	"27.000"	"9.20723669125491"	"15"	"0.004205"	"0.04605"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSnFR.[G]"	"N-Term(TMT6plex); N13(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.39026"	"1607.77324"	"1607.77638"	"-1.96"	"-0.00157"	"7/132"	"7"	"132"	"257702.784912109"	"HCD"	"MS2"	"0"	"22.8"	"100.000"	"53.9085"	"16921"	"16921"	"16896"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.9"	""	"23.9"	""	"21.4"	""	"48.5"	""	"41.5"	"46.8"	""	"534"	"33"	"34.000"	"27.000"	"0.012036806011257"	"15"	"0"	"0.001997"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSnFR.[G]"	"N-Term(TMT6plex); N13(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.1923"	"0.0000"	"1"	"1"	"1"	"804.39038"	"1607.77349"	"1607.77638"	"-1.80"	"-0.00145"	"9/132"	"9"	"132"	"344885.843688965"	"HCD"	"MS2"	"20.26907"	"23.7"	"100.000"	"53.6895"	"16843"	"16843"	"16812"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.8"	""	"26.9"	""	"22.5"	""	"49.8"	""	"47.3"	"50.8"	""	"533"	"26"	"34.000"	"27.000"	"0.0636351706896362"	"14"	"0"	"5.55E-05"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGnFGPGPGSNFR.[G]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"804.39044"	"1607.77361"	"1607.77638"	"-1.73"	"-0.00139"	"8/132"	"8"	"132"	"206384.456848145"	"HCD"	"MS2"	"0"	"17.9"	"100.000"	"57.7426"	"18478"	"18478"	"18454"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.7"	""	"18.6"	""	"16.6"	""	"34.0"	"2.6"	"40.3"	"37.4"	""	"537"	"15"	"34.000"	"27.000"	"0.87890976574968"	"19"	"0.0001301"	"0.004871"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSnFR.[G]"	"N-Term(TMT6plex); N13(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"804.39087"	"1607.77446"	"1607.77638"	"-1.20"	"-0.00096"	"7/132"	"7"	"132"	"196395.687011719"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"54.2077"	"17043"	"17043"	"17024"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.7"	""	"17.0"	""	"15.5"	""	"37.4"	""	"31.7"	"35.6"	""	"545"	"13"	"34.000"	"27.000"	"1.30126727071721"	"18"	"0.0006732"	"0.008372"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGnFGPGPGSNFR.[G]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.2143"	"0.0000"	"1"	"1"	"1"	"804.39099"	"1607.77471"	"1607.77638"	"-1.04"	"-0.00084"	"8/132"	"8"	"132"	"464587.570861816"	"HCD"	"MS2"	"40.05615"	"26.5"	"100.000"	"56.8471"	"18128"	"18128"	"18099"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.6"	""	"29.9"	""	"22.6"	""	"54.1"	"1.3"	"48.8"	"52.8"	""	"544"	"14"	"34.000"	"27.000"	"1.02699635931713"	"13"	"0.001211"	"0.01534"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSnFR.[G]"	"N-Term(TMT6plex); N13(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"804.39148"	"1607.77568"	"1607.77638"	"-0.44"	"-0.00035"	"5/132"	"5"	"132"	"240124.945861816"	"HCD"	"MS2"	"0"	"17.7"	"100.000"	"54.0208"	"16978"	"16978"	"16955"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.2"	""	"20.2"	""	"20.3"	""	"31.7"	"1.2"	"32.1"	"35.8"	""	"552"	"9"	"34.000"	"27.000"	"3.51486850360599"	"18"	"0.003449"	"0.03364"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSnFR.[G]"	"N-Term(TMT6plex); N13(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"804.39154"	"1607.77580"	"1607.77638"	"-0.36"	"-0.00029"	"6/132"	"6"	"132"	"521638.695068359"	"HCD"	"MS2"	"41.47521"	"28.3"	"100.000"	"57.0356"	"18191"	"18191"	"18163"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.3"	""	"32.9"	""	"33.3"	""	"50.4"	""	"58.6"	"54.1"	""	"552"	"15"	"34.000"	"27.000"	"0.913921895291951"	"13"	"0"	"0.002726"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGnFGPGPGSNFR.[G]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"804.39288"	"1607.77849"	"1607.77638"	"1.31"	"0.00105"	"5/132"	"5"	"132"	"183282.375854492"	"HCD"	"MS2"	"0"	"14.6"	"100.000"	"57.5540"	"18416"	"18416"	"18392"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.4"	""	"17.3"	""	"13.0"	""	"27.4"	""	"33.9"	"29.7"	""	"571"	"16"	"34.000"	"27.000"	"0.646555949817819"	"15"	"0.0003538"	"0.006759"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALVGQAEDFSGR"	"[K].eALVGQAEDFSGR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"536.61194"	"1607.82126"	"1607.82267"	"-0.87"	"-0.00047"	"14/130"	"14"	"130"	"1290008.33966064"	"HCD"	"MS2"	"13.53102"	"11.9"	"100.000"	"70.2621"	"23549"	"23549"	"23528"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.3"	""	"15.8"	""	"17.3"	""	"21.1"	""	"23.1"	"20.3"	""	"897"	"56"	"36.000"	"29.000"	"0.000107340211674782"	"17"	"0"	"1.233E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALVGQAEDFSGR"	"[K].eALVGQAEDFSGR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"804.41455"	"1607.82182"	"1607.82267"	"-0.52"	"-0.00042"	"9/130"	"9"	"130"	"875406.766357422"	"HCD"	"MS2"	"0"	"42.6"	"100.000"	"70.4075"	"23609"	"23609"	"23592"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.1"	""	"60.4"	""	"59.1"	""	"63.5"	""	"78.2"	"75.7"	""	"893"	"64"	"36.000"	"29.000"	"1.98071259515385E-05"	"22"	"0"	"7.119E-06"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALVGQAEDFSGR"	"[K].eALVGQAEDFSGR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8971"	"0.0000"	"1"	"1"	"1"	"804.41467"	"1607.82207"	"1607.82267"	"-0.37"	"-0.00030"	"9/130"	"9"	"130"	"610835.103942871"	"HCD"	"MS2"	"0"	"30.7"	"100.000"	"70.5523"	"23654"	"23654"	"23637"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.7"	""	"41.0"	""	"45.0"	""	"43.1"	"0.5"	"56.1"	"62.1"	""	"901"	"68"	"36.000"	"29.000"	"7.02578402523543E-06"	"23"	"0"	"2.725E-07"	"1.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALVGQAEDFSGR"	"[K].eALVGQAEDFSGR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.9254"	"0.0000"	"1"	"1"	"1"	"804.41473"	"1607.82219"	"1607.82267"	"-0.30"	"-0.00024"	"12/130"	"12"	"130"	"713319.153686523"	"HCD"	"MS2"	"0"	"35.1"	"100.000"	"70.1143"	"23489"	"23489"	"23469"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.2"	""	"46.1"	""	"42.5"	""	"64.1"	"0.1"	"60.6"	"62.0"	""	"901"	"67"	"36.000"	"29.000"	"8.1600871172513E-06"	"22"	"0"	"7.167E-07"	"1.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALVGQAEDFSGR"	"[K].eALVGQAEDFSGR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"536.61230"	"1607.82236"	"1607.82267"	"-0.19"	"-0.00010"	"16/130"	"16"	"130"	"1246009.54779053"	"HCD"	"MS2"	"15.06316"	"11.8"	"100.000"	"70.3675"	"23578"	"23578"	"23557"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.0"	""	"13.0"	""	"16.3"	""	"25.4"	"1.6"	"22.6"	"16.6"	""	"901"	"58"	"36.000"	"29.000"	"6.77165455723555E-05"	"16"	"0"	"9.847E-06"	"0.904"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALVGQAEDFSGR"	"[K].eALVGQAEDFSGR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.41534"	"1607.82341"	"1607.82267"	"0.46"	"0.00037"	"9/130"	"9"	"130"	"602641.069091797"	"HCD"	"MS2"	"0"	"31.4"	"100.000"	"70.2498"	"23530"	"23530"	"23509"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.9"	""	"40.7"	""	"35.5"	""	"54.7"	"0.2"	"60.3"	"59.1"	""	"884"	"63"	"36.000"	"29.000"	"2.02965521673896E-05"	"17"	"0"	"2.244E-06"	"1.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQESEERPK"	"[R].fQESEERPk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"536.63086"	"1607.87802"	"1607.87934"	"-0.82"	"-0.00044"	"9/84"	"9"	"84"	"6265094.95861816"	"HCD"	"MS2"	"33.371"	"247.6"	"100.000"	"34.2595"	"8939"	"8939"	"8919"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"404.7"	""	"287.9"	""	"322.4"	""	"394.3"	""	"471.7"	"467.3"	""	"1081"	"12"	"37.000"	"30.000"	"3.79136588795994"	"17"	"0.0001301"	"0.004601"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQESEERPK"	"[R].fQESEERPk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"536.63098"	"1607.87839"	"1607.87934"	"-0.59"	"-0.00032"	"10/84"	"10"	"84"	"5521585.86004639"	"HCD"	"MS2"	"31.42771"	"213.0"	"100.000"	"34.3097"	"8953"	"8953"	"8935"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"362.9"	""	"248.7"	""	"266.2"	""	"342.7"	""	"411.1"	"388.5"	""	"1071"	"11"	"37.000"	"30.000"	"4.22434592984736"	"15"	"0.0001301"	"0.00401"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEYPESAK"	"[R].tPEEYPESAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"804.92914"	"1608.85100"	"1608.85212"	"-0.70"	"-0.00056"	"9/86"	"9"	"86"	"1188042.26965332"	"HCD"	"MS2"	"0"	"87.7"	"100.000"	"44.9966"	"13299"	"13299"	"13273"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"101.6"	""	"104.1"	""	"100.4"	""	"139.1"	"0.6"	"199.8"	"188.7"	""	"1041"	"48"	"37.000"	"30.000"	"0.000892114778558137"	"19"	"0"	"0.0007773"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEYPESAK"	"[R].tPEEYPESAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"804.92932"	"1608.85137"	"1608.85212"	"-0.47"	"-0.00038"	"9/86"	"9"	"86"	"1782700.40429688"	"HCD"	"MS2"	"0"	"123.9"	"100.000"	"45.2887"	"13418"	"13418"	"13399"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"133.6"	""	"142.2"	""	"146.5"	""	"181.8"	"2.3"	"291.2"	"282.0"	""	"1042"	"45"	"37.000"	"30.000"	"0.00164754666094773"	"22"	"0"	"0.001171"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEYPESAK"	"[R].tPEEYPESAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"804.92938"	"1608.85149"	"1608.85212"	"-0.40"	"-0.00032"	"7/86"	"7"	"86"	"1480505.60101318"	"HCD"	"MS2"	"5.078775"	"103.5"	"100.000"	"45.1809"	"13363"	"13363"	"13339"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"118.2"	""	"123.3"	""	"126.3"	""	"152.6"	""	"243.8"	"220.9"	""	"1042"	"54"	"37.000"	"30.000"	"0.00022173677324268"	"20"	"0.0002479"	"0.005278"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEYPESAK"	"[R].tPEEYPESAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"804.92963"	"1608.85198"	"1608.85212"	"-0.09"	"-0.00007"	"9/86"	"9"	"86"	"1403385.56872559"	"HCD"	"MS2"	"0"	"102.6"	"100.000"	"45.4733"	"13482"	"13482"	"13463"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"121.3"	""	"105.8"	""	"120.7"	""	"145.7"	""	"245.6"	"237.2"	""	"1048"	"45"	"37.000"	"30.000"	"0.00166085335063479"	"18"	"0"	"0.0006638"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIEPNEIHAK"	"[K].vIEPnEIHAk.[C]"	"N-Term(TMT6plex); N5(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.4706"	"0.0000"	"1"	"1"	"1"	"536.98340"	"1608.93564"	"1608.93613"	"-0.30"	"-0.00016"	"6/88"	"6"	"88"	"1295632.95812988"	"HCD"	"MS2"	"29.84496"	"40.5"	"100.000"	"58.8827"	"18943"	"18943"	"18920"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.4"	""	"58.3"	""	"58.5"	""	"57.5"	"0.0"	"73.1"	"76.2"	""	"787"	"17"	"35.000"	"28.000"	"0.7062276821586"	"23"	"0.0001301"	"0.003939"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIEPNEIHAK"	"[K].vIEPnEIHAk.[C]"	"N-Term(TMT6plex); N5(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"536.98352"	"1608.93601"	"1608.93613"	"-0.07"	"-0.00004"	"11/88"	"11"	"88"	"1567954.09161377"	"HCD"	"MS2"	"32.92039"	"47.0"	"100.000"	"58.7058"	"18886"	"18886"	"18863"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.8"	""	"69.7"	""	"64.1"	""	"73.9"	"0.7"	"87.3"	"83.8"	""	"784"	"27"	"35.000"	"28.000"	"0.0716615284727955"	"22"	"0"	"0.001529"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIDQEELNK"	"[K].yIDQEELNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6600"	"0.0000"	"1"	"1"	"1"	"805.44336"	"1609.87944"	"1609.88376"	"-2.68"	"-0.00216"	"8/80"	"8"	"80"	"524932.990661621"	"HCD"	"MS2"	"0"	"48.7"	"100.000"	"65.7020"	"21691"	"21691"	"21670"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.7"	""	"52.8"	""	"59.9"	""	"69.6"	""	"96.0"	"87.6"	""	"953"	"50"	"36.000"	"29.000"	"0.000455053967239214"	""	"0"	"0.0001649"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVAAGDDK"	"[R].yLAEVAAGDDk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"805.44403"	"1609.88078"	"1609.88376"	"-1.85"	"-0.00149"	"10/92"	"10"	"92"	"152159.511901855"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"74.0483"	"25077"	"25077"	"25054"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.7"	""	"14.2"	""	"19.3"	""	"18.5"	""	"28.7"	"26.2"	""	"958"	"35"	"36.000"	"29.000"	"0.0139102685148847"	"27"	"0"	"0.003562"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIDQEELNK"	"[K].yIDQEELNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.4688"	"0.0000"	"1"	"1"	"1"	"537.29895"	"1609.88230"	"1609.88376"	"-0.91"	"-0.00049"	"10/80"	"10"	"80"	"3596124.27825928"	"HCD"	"MS2"	"14.24387"	"92.3"	"100.000"	"65.7803"	"21723"	"21723"	"21702"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"178.1"	""	"92.9"	""	"106.5"	""	"160.3"	""	"177.2"	"165.2"	""	"945"	"32"	"36.000"	"29.000"	"0.0280803044945858"	""	"0.0006732"	"0.008855"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIDQEELNK"	"[K].yIDQEELNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6863"	"0.0000"	"1"	"1"	"1"	"805.44495"	"1609.88262"	"1609.88376"	"-0.71"	"-0.00057"	"8/80"	"8"	"80"	"5289354.50964355"	"HCD"	"MS2"	"0"	"441.7"	"100.000"	"65.9993"	"21813"	"21813"	"21796"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"852.3"	""	"411.6"	""	"497.6"	""	"678.8"	"2.4"	"896.5"	"848.3"	""	"943"	"51"	"36.000"	"29.000"	"0.000385906147605554"	""	"0"	"0.001171"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIDQEELNK"	"[K].yIDQEELNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.3077"	"0.0000"	"1"	"1"	"1"	"537.29913"	"1609.88285"	"1609.88376"	"-0.57"	"-0.00030"	"7/80"	"7"	"80"	"6756024.9743042"	"HCD"	"MS2"	"8.246135"	"153.2"	"100.000"	"66.0777"	"21845"	"21845"	"21828"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"277.4"	""	"152.3"	""	"179.8"	""	"247.3"	""	"292.7"	"305.6"	""	"941"	"39"	"36.000"	"29.000"	"0.0060612141407162"	""	"0.0003538"	"0.006137"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVAAGDDK"	"[R].yLAEVAAGDDk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.8806"	"0.0000"	"1"	"1"	"1"	"805.44513"	"1609.88298"	"1609.88376"	"-0.48"	"-0.00039"	"9/92"	"9"	"92"	"372601.672851563"	"HCD"	"MS2"	"0"	"32.0"	"100.000"	"74.2478"	"25171"	"25171"	"25153"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.8"	""	"37.9"	""	"45.1"	""	"55.3"	""	"59.3"	"71.7"	""	"948"	"67"	"36.000"	"29.000"	"1.02749174568454E-05"	"25"	"0"	"4.317E-06"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVAAGDDK"	"[R].yLAEVAAGDDk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"3"	"3"	"0.9808"	"0.0000"	"1"	"1"	"1"	"537.29919"	"1609.88303"	"1609.88376"	"-0.45"	"-0.00024"	"12/92"	"12"	"92"	"1901102.77252197"	"HCD"	"MS2"	"15.10237"	"43.1"	"100.000"	"74.1743"	"25141"	"25141"	"25121"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.1"	""	"48.8"	""	"59.0"	""	"64.2"	""	"91.2"	"106.2"	""	"948"	"52"	"36.000"	"29.000"	"0.000327927880215576"	"17"	"0"	"0.0002011"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIDQEELNK"	"[K].yIDQEELNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.4375"	"0.0000"	"1"	"1"	"1"	"537.29919"	"1609.88303"	"1609.88376"	"-0.45"	"-0.00024"	"10/80"	"10"	"80"	"4655266.61791992"	"HCD"	"MS2"	"9.170424"	"112.6"	"100.000"	"66.2038"	"21881"	"21881"	"21864"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"187.7"	""	"108.6"	""	"132.7"	""	"170.4"	"0.2"	"223.4"	"245.2"	""	"948"	"32"	"36.000"	"29.000"	"0.0296331856375675"	""	"0.001374"	"0.01608"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVAAGDDK"	"[R].yLAEVAAGDDk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"3"	"3"	"0.9636"	"0.0000"	"1"	"1"	"1"	"537.29926"	"1609.88321"	"1609.88376"	"-0.34"	"-0.00018"	"13/92"	"13"	"92"	"2299538.77197266"	"HCD"	"MS2"	"19.65715"	"51.7"	"100.000"	"74.2469"	"25158"	"25158"	"25142"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.2"	""	"56.1"	""	"64.2"	""	"89.1"	""	"106.0"	"123.2"	""	"946"	"55"	"36.000"	"29.000"	"0.000156625020461266"	"18"	"0"	"0.0001177"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIDQEELNK"	"[K].yIDQEELNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.3095"	"0.0000"	"1"	"1"	"1"	"537.29938"	"1609.88358"	"1609.88376"	"-0.11"	"-0.00006"	"7/80"	"7"	"80"	"5402829.14648438"	"HCD"	"MS2"	"11.44522"	"133.3"	"100.000"	"65.8970"	"21755"	"21755"	"21737"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"260.9"	""	"131.3"	""	"142.4"	""	"231.7"	""	"240.4"	"256.2"	""	"948"	"42"	"36.000"	"29.000"	"0.00286271650324404"	""	"0.0006732"	"0.008987"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIDQEELNK"	"[K].yIDQEELNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.4808"	"0.0000"	"1"	"1"	"1"	"805.44550"	"1609.88371"	"1609.88376"	"-0.03"	"-0.00002"	"16/80"	"16"	"80"	"4984378.32318115"	"HCD"	"MS2"	"0"	"417.0"	"100.000"	"66.0862"	"21833"	"21833"	"21816"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"769.8"	""	"387.8"	""	"451.5"	""	"644.7"	""	"842.1"	"860.0"	""	"953"	"52"	"36.000"	"29.000"	"0.000281230814701884"	""	"0"	"0.0009292"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIDQEELNK"	"[K].yIDQEELNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7656"	"0.0000"	"1"	"1"	"1"	"805.44556"	"1609.88384"	"1609.88376"	"0.05"	"0.00004"	"8/80"	"8"	"80"	"417556.211181641"	"HCD"	"MS2"	"0"	"40.0"	"100.000"	"66.3083"	"21938"	"21938"	"21917"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.9"	""	"42.9"	""	"43.8"	""	"68.6"	"0.6"	"79.9"	"86.4"	""	"955"	"64"	"36.000"	"29.000"	"1.87056746318967E-05"	""	"0"	"3.745E-05"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVAAGDDK"	"[R].yLAEVAAGDDk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"805.44580"	"1609.88432"	"1609.88376"	"0.35"	"0.00028"	"8/92"	"8"	"92"	"350528.553894043"	"HCD"	"MS2"	"0"	"28.5"	"100.000"	"74.3990"	"25219"	"25219"	"25201"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.0"	""	"32.2"	""	"32.9"	""	"51.0"	"0.3"	"66.6"	"60.9"	""	"950"	"51"	"36.000"	"29.000"	"0.000356199749432916"	"20"	"0"	"5.395E-05"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIDQEELNK"	"[K].yIDQEELNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"805.44623"	"1609.88518"	"1609.88376"	"0.88"	"0.00071"	"13/80"	"13"	"80"	"333070.930480957"	"HCD"	"MS2"	"0"	"33.9"	"100.000"	"66.4043"	"21962"	"21962"	"21941"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.3"	""	"31.7"	""	"37.2"	""	"56.8"	"0.2"	"69.3"	"69.3"	""	"954"	"38"	"36.000"	"29.000"	"0.00842400040467301"	"25"	"0"	"0.001973"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVAAGDDK"	"[R].yLAEVAAGDDk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"805.44666"	"1609.88603"	"1609.88376"	"1.41"	"0.00114"	"8/92"	"8"	"92"	"281736.385742188"	"HCD"	"MS2"	"0"	"25.0"	"100.000"	"73.9571"	"25053"	"25053"	"25028"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.8"	""	"33.6"	""	"27.8"	""	"47.7"	""	"54.5"	"49.1"	""	"930"	"52"	"36.000"	"29.000"	"0.000289369632603659"	"25"	"0"	"0.0002975"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIDQEELNK"	"[K].yIDQEELNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"805.44666"	"1609.88603"	"1609.88376"	"1.41"	"0.00114"	"8/80"	"8"	"80"	"620396.902770996"	"HCD"	"MS2"	"0"	"57.9"	"100.000"	"65.7912"	"21712"	"21712"	"21692"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"122.1"	""	"59.8"	""	"61.1"	""	"92.7"	"1.1"	"112.2"	"98.8"	""	"930"	"50"	"36.000"	"29.000"	"0.000442031229050171"	""	"0"	"0.0001434"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWAEDGEFTSAR"	"[K].lWAEDGEFTSAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.90314"	"1610.79900"	"1610.80120"	"-1.37"	"-0.00110"	"7/100"	"7"	"100"	"124651.767700195"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"85.2687"	"29576"	"29576"	"29559"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.7"	""	"11.2"	""	"7.7"	""	"17.6"	""	"21.5"	"14.0"	""	"709"	"9"	"35.000"	"28.000"	"4.16501183226063"	"13"	"0.007213"	"0.08309"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWAEDGEFTSAR"	"[K].lWAEDGEFTSAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"805.90387"	"1610.80046"	"1610.80120"	"-0.46"	"-0.00037"	"10/100"	"10"	"100"	"462600.255859375"	"HCD"	"MS2"	"0"	"25.1"	"100.000"	"85.5439"	"29684"	"29684"	"29673"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.2"	""	"23.7"	""	"26.3"	""	"50.0"	"1.5"	"57.3"	"63.1"	""	"715"	"58"	"35.000"	"28.000"	"6.05725763659919E-05"	"22"	"0"	"2.003E-05"	"0.837"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWAEDGEFTSAR"	"[K].lWAEDGEFTSAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.8983"	"0.0000"	"1"	"1"	"1"	"805.90399"	"1610.80071"	"1610.80120"	"-0.31"	"-0.00025"	"9/100"	"9"	"100"	"412127.295349121"	"HCD"	"MS2"	"0"	"23.3"	"100.000"	"85.5999"	"29704"	"29704"	"29692"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.9"	""	"26.1"	""	"26.5"	""	"51.5"	"0.8"	"44.1"	"51.3"	""	"716"	"59"	"35.000"	"28.000"	"4.20613324668352E-05"	"22"	"0"	"2.566E-06"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWAEDGEFTSAR"	"[K].lWAEDGEFTSAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"805.90436"	"1610.80144"	"1610.80120"	"0.15"	"0.00012"	"7/100"	"7"	"100"	"176839.124145508"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"85.3108"	"29592"	"29592"	"29578"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.5"	""	"12.3"	""	"15.5"	""	"23.0"	""	"27.5"	"25.4"	""	"743"	"30"	"35.000"	"28.000"	"0.0381908054753985"	"16"	"0"	"0.0008355"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGTFVVSQPLNYR"	"[M].sTGTFVVSQPLNYR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"805.91162"	"1610.81597"	"1610.81730"	"-0.83"	"-0.00067"	"5/128"	"5"	"128"	"103350.553588867"	"HCD"	"MS2"	"0"	"1.5"	"100.000"	"96.1064"	"33713"	"33713"	"33704"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.8"	""	"3.5"	""	""	""	"3.3"	""	"2.1"	"2.9"	"NoQuanLabels"	"832"	"21"	"36.000"	"29.000"	"0.32665802399779"	"16"	"0.005617"	"0.06451"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGTFVVSQPLNYR"	"[M].sTGTFVVSQPLNYR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"805.91180"	"1610.81633"	"1610.81730"	"-0.60"	"-0.00048"	"7/128"	"7"	"128"	"238213.248596191"	"HCD"	"MS2"	"0"	"0.4"	"100.000"	"96.6668"	"33897"	"33897"	"33892"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	""	""	""	""	"2.2"	"1.9"	"NoQuanLabels"	"836"	"50"	"36.000"	"29.000"	"0.0004132151935666"	"19"	"0"	"0.001213"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGTFVVSQPLNYR"	"[M].sTGTFVVSQPLNYR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8197"	"0.0000"	"1"	"1"	"1"	"805.91211"	"1610.81694"	"1610.81730"	"-0.22"	"-0.00018"	"10/128"	"10"	"128"	"259120.267333984"	"HCD"	"MS2"	"0"	"1.0"	"100.000"	"96.6285"	"33902"	"33902"	"33899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.5"	""	"2.5"	""	"2.1"	""	"2.1"	""	""	""	"NoQuanLabels"	"839"	"61"	"36.000"	"29.000"	"3.48924901977571E-05"	"27"	"0"	"0.0001056"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGTFVVSQPLNYR"	"[M].sTGTFVVSQPLNYR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"805.91229"	"1610.81731"	"1610.81730"	"0.01"	"0.00001"	"6/128"	"6"	"128"	"115199.993041992"	"HCD"	"MS2"	"0"	"1.2"	"100.000"	"96.1484"	"33706"	"33706"	"33698"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.2"	""	""	""	""	""	""	""	"4.0"	"4.8"	"NoQuanLabels"	"837"	"30"	"36.000"	"29.000"	"0.0443297683986695"	"23"	"0.0023"	"0.02429"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGTFVVSQPLNYR"	"[M].sTGTFVVSQPLNYR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8413"	"0.0000"	"1"	"1"	"1"	"805.91229"	"1610.81731"	"1610.81730"	"0.01"	"0.00001"	"11/128"	"11"	"128"	"1081077.82855225"	"HCD"	"MS2"	"0"	"1.6"	"100.000"	"96.4122"	"33803"	"33803"	"33798"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.5"	""	"2.0"	""	"2.0"	""	"1.6"	""	"2.1"	"2.7"	"NoQuanLabels"	"837"	"63"	"36.000"	"29.000"	"1.88232869272841E-05"	"26"	"0"	"7.097E-05"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGTFVVSQPLNYR"	"[M].sTGTFVVSQPLNYR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8657"	"0.0000"	"1"	"1"	"1"	"805.91248"	"1610.81767"	"1610.81730"	"0.23"	"0.00019"	"11/128"	"11"	"128"	"1178507.61260986"	"HCD"	"MS2"	"0"	"2.4"	"100.000"	"96.3768"	"33811"	"33811"	"33802"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.0"	""	"3.5"	""	""	""	"5.0"	""	"4.2"	"5.7"	"NoQuanLabels"	"847"	"67"	"36.000"	"29.000"	"9.37245609517988E-06"	"26"	"0"	"1.113E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETVDDFWK"	"[R].dETVDDFWk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"806.91650"	"1612.82573"	"1612.82591"	"-0.11"	"-0.00009"	"11/74"	"11"	"74"	"299643.420959473"	"HCD"	"MS2"	"0"	"23.4"	"100.000"	"93.4224"	"32726"	"32726"	"32718"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.2"	""	"27.3"	""	"26.4"	""	"44.6"	""	"48.4"	"43.5"	""	"876"	"33"	"36.000"	"29.000"	"0.0199284770345721"	"17"	"0"	"0.002028"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETVDDFWK"	"[R].dETVDDFWk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"806.91675"	"1612.82622"	"1612.82591"	"0.19"	"0.00016"	"14/74"	"14"	"74"	"253744.504760742"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"93.4467"	"32751"	"32751"	"32744"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.8"	""	"25.9"	""	"28.3"	""	"42.0"	""	"47.7"	"53.0"	""	"885"	"44"	"36.000"	"29.000"	"0.00193603531532526"	"24"	"0"	"0.0005835"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENTNEIYSGK"	"[R].eNTNEIYSGk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"806.93207"	"1612.85686"	"1612.85827"	"-0.88"	"-0.00071"	"14/102"	"14"	"102"	"381683.872131348"	"HCD"	"MS2"	"0"	"37.6"	"100.000"	"46.9827"	"14096"	"14096"	"14067"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.7"	""	"34.1"	""	"44.2"	""	"65.4"	""	"86.1"	"79.3"	""	"964"	"46"	"36.000"	"29.000"	"0.00111698422128481"	""	"0"	"0.0003636"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENTNEIYSGK"	"[R].eNTNEIYSGk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"806.93237"	"1612.85747"	"1612.85827"	"-0.50"	"-0.00040"	"13/102"	"13"	"102"	"600397.358520508"	"HCD"	"MS2"	"0"	"56.7"	"100.000"	"46.7807"	"14025"	"14025"	"13998"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.4"	""	"63.6"	""	"53.2"	""	"100.1"	"0.8"	"125.7"	"129.6"	""	"992"	"27"	"36.000"	"29.000"	"0.0964898600484841"	"19"	"0.0001301"	"0.004609"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLPDEDRVDVR"	"[K].lGLPDEDRVDVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WU61"	"Chloride channel CLIC-like protein 1 OS=Rattus norvegicus OX=10116 GN=Clcc1 PE=1 SV=1"	"Q9WU61"	"Chloride channel CLIC-like protein 1 OS=Rattus norvegicus OX=10116 GN=Clcc1 PE=1 SV=1"	"1"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"538.29974"	"1612.88468"	"1612.88560"	"-0.57"	"-0.00031"	"6/106"	"6"	"106"	"1490327.09118652"	"HCD"	"MS2"	"21.90087"	"37.2"	"100.000"	"65.1345"	"21460"	"21460"	"21437"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.4"	""	"44.3"	""	"44.3"	""	"61.7"	"0.5"	"70.2"	"75.1"	""	"909"	"8"	"36.000"	"29.000"	"6.8003910569492"	"17"	"0.006443"	"0.07285"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLPDEDRVDVR"	"[K].lGLPDEDRVDVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WU61"	"Chloride channel CLIC-like protein 1 OS=Rattus norvegicus OX=10116 GN=Clcc1 PE=1 SV=1"	"Q9WU61"	"Chloride channel CLIC-like protein 1 OS=Rattus norvegicus OX=10116 GN=Clcc1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"538.30029"	"1612.88633"	"1612.88560"	"0.45"	"0.00024"	"11/106"	"11"	"106"	"1646429.42327881"	"HCD"	"MS2"	"13.82268"	"43.7"	"100.000"	"65.1824"	"21464"	"21464"	"21441"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.7"	""	"50.0"	""	"57.6"	""	"79.2"	""	"76.4"	"94.2"	""	"889"	"8"	"36.000"	"29.000"	"6.32225145876093"	"13"	"0.004022"	"0.04283"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSNDSLYGGDSR"	"[K].vDSNDSLYGGDSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"807.38428"	"1613.76128"	"1613.76046"	"0.51"	"0.00041"	"5/134"	"5"	"134"	"186855.57623291"	"HCD"	"MS2"	"29.9013"	"14.4"	"100.000"	"45.2244"	"13392"	"13392"	"13367"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.2"	""	"18.1"	""	"16.1"	""	"22.2"	""	"32.5"	"25.6"	""	"480"	"13"	"33.000"	"26.000"	"1.32193847137297"	"13"	"0.001546"	"0.01924"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSNDSLYGGDSR"	"[K].vDSNDSLYGGDSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"807.38531"	"1613.76335"	"1613.76046"	"1.79"	"0.00145"	"5/134"	"5"	"134"	"174245.069580078"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"45.3925"	"13450"	"13450"	"13419"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.7"	""	"15.3"	""	"19.8"	""	"17.4"	"0.7"	"25.3"	"30.3"	""	"487"	"17"	"33.000"	"26.000"	"0.445142402630758"	"14"	"0.0023"	"0.02349"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDPDSPAEASGLR"	"[R].aVDPDSPAEASGLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"538.61499"	"1613.83042"	"1613.83323"	"-1.74"	"-0.00094"	"12/120"	"12"	"120"	"1465783.41479492"	"HCD"	"MS2"	"63.13483"	"45.9"	"100.000"	"52.2311"	"16236"	"16236"	"16208"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.5"	""	"54.2"	""	"57.0"	""	"80.4"	""	"99.9"	"92.0"	""	"811"	"22"	"36.000"	"29.000"	"0.272892034123291"	"14"	"0"	"0.0001812"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDPDSPAEASGLR"	"[R].aVDPDSPAEASGLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"538.61597"	"1613.83335"	"1613.83323"	"0.07"	"0.00004"	"14/120"	"14"	"120"	"1463048.41540527"	"HCD"	"MS2"	"63.77246"	"39.1"	"100.000"	"51.8507"	"16092"	"16092"	"16069"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.2"	"1.7"	"45.4"	""	"49.7"	""	"70.7"	""	"79.6"	"80.3"	""	"832"	"26"	"36.000"	"29.000"	"0.10891641314191"	"14"	"0"	"0.0001488"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDPDSPAEASGLR"	"[R].aVDPDSPAEASGLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"807.42120"	"1613.83513"	"1613.83323"	"1.18"	"0.00095"	"8/120"	"8"	"120"	"499660.609619141"	"HCD"	"MS2"	"0"	"30.0"	"100.000"	"52.0379"	"16157"	"16157"	"16133"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.8"	""	"35.8"	""	"42.0"	""	"51.4"	""	"58.3"	"61.6"	""	"828"	"48"	"36.000"	"29.000"	"0.000729458083214414"	"25"	"0"	"0.0006401"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDPDSPAEASGLR"	"[R].aVDPDSPAEASGLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"807.42133"	"1613.83537"	"1613.83323"	"1.33"	"0.00107"	"6/120"	"6"	"120"	"259767.198913574"	"HCD"	"MS2"	"9.986595"	"17.2"	"100.000"	"52.0256"	"16163"	"16163"	"16142"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.3"	""	"27.1"	""	"23.8"	""	"28.5"	""	"31.8"	"33.3"	""	"820"	"21"	"36.000"	"29.000"	"0.352195543817213"	"17"	"0.0006732"	"0.008821"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDPDSPAEASGLR"	"[R].aVDPDSPAEASGLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"807.42175"	"1613.83623"	"1613.83323"	"1.86"	"0.00150"	"11/120"	"11"	"120"	"264767.247741699"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"52.3302"	"16276"	"16276"	"16256"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.6"	""	"22.6"	""	"17.8"	""	"25.7"	""	"29.3"	"32.9"	""	"824"	"21"	"36.000"	"29.000"	"0.322030655490392"	"22"	"0.0002479"	"0.005313"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDPDSPAEASGLR"	"[R].aVDPDSPAEASGLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"807.42273"	"1613.83818"	"1613.83323"	"3.07"	"0.00248"	"13/120"	"13"	"120"	"404114.073669434"	"HCD"	"MS2"	"0"	"21.9"	"100.000"	"51.7013"	"16031"	"16031"	"16005"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.5"	""	"19.4"	""	"32.1"	""	"35.5"	""	"47.2"	"46.7"	""	"818"	"24"	"36.000"	"29.000"	"0.165852990998389"	"20"	"0.0003538"	"0.006907"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPAITLENPDIK"	"[R].SSPAITLENPDIk.[Y]"	"K13(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"807.45111"	"1613.89495"	"1613.89477"	"0.11"	"0.00009"	"6/124"	"6"	"124"	"169301.758666992"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"71.9648"	"24243"	"24243"	"24214"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.8"	""	"10.1"	""	"12.6"	""	"13.8"	""	"17.9"	"18.3"	""	"840"	"23"	"36.000"	"29.000"	"0.189779496637467"	"17"	"0.0008629"	"0.01065"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPAITLENPDIK"	"[R].SSPAITLENPDIk.[Y]"	"K13(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"807.45142"	"1613.89556"	"1613.89477"	"0.49"	"0.00039"	"8/124"	"8"	"124"	"214273.925170898"	"HCD"	"MS2"	"14.28883"	"10.8"	"100.000"	"72.1556"	"24307"	"24307"	"24282"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.0"	""	"14.0"	""	"9.9"	""	"19.0"	""	"26.0"	"21.3"	""	"831"	"58"	"36.000"	"29.000"	"6.53989880185715E-05"	"18"	"0"	"0.0006947"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASLEVENQNLR"	"[R].iASLEVENQNLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.8393"	"0.0000"	"1"	"1"	"1"	"807.95325"	"1614.89922"	"1614.90125"	"-1.26"	"-0.00102"	"9/104"	"9"	"104"	"221513.862365723"	"HCD"	"MS2"	"0"	"14.0"	"100.000"	"74.2260"	"25149"	"25149"	"25126"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.8"	""	"21.9"	""	"13.9"	""	"25.5"	""	"25.5"	"24.8"	""	"969"	"56"	"36.000"	"29.000"	"0.000111761901293487"	"25"	"0"	"9.699E-06"	"0.906"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASLEVENQNLR"	"[R].iASLEVENQNLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"807.95355"	"1614.89983"	"1614.90125"	"-0.88"	"-0.00071"	"14/104"	"14"	"104"	"219680.362426758"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"74.0263"	"25081"	"25081"	"25060"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.7"	""	"14.7"	""	"12.7"	""	"19.7"	"1.3"	"20.5"	"18.3"	""	"962"	"46"	"36.000"	"29.000"	"0.00134941357985477"	"17"	"0"	"6.65E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EEGYDSVFSVVR"	"[].eEGYDSVFSVVR.[]"	"N-Term(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"808.41150"	"1615.81572"	"1615.81652"	"-0.49"	"-0.00040"	"3/104"	"3"	"104"	"111852.355285645"	"HCD"	"MS2"	"35.69837"	"6.3"	"100.000"	"90.4101"	"31573"	"31573"	"31560"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.9"	""	"7.4"	""	"11.0"	""	"12.3"	""	"14.3"	"8.1"	""	"784"	"2"	"35.000"	"28.000"	"26.4414986857585"	"14"	"0.008437"	"0.1004"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTPQTAETDAIR"	"[R].aLTPQTAETDAIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PPK9"	"EARP and GARP complex-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Eipr1 PE=1 SV=1"	"Q5PPK9"	"EARP and GARP complex-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Eipr1 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"808.44574"	"1615.88420"	"1615.88527"	"-0.66"	"-0.00053"	"8/126"	"8"	"126"	"313956.854797363"	"HCD"	"MS2"	"0"	"19.1"	"100.000"	"59.0139"	"18997"	"18997"	"18968"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.1"	""	"16.0"	""	"21.2"	""	"31.4"	"1.6"	"39.6"	"43.4"	""	"949"	"25"	"36.000"	"29.000"	"0.160411764779738"	"20"	"0.000936"	"0.01144"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTPQTAETDAIR"	"[R].aLTPQTAETDAIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PPK9"	"EARP and GARP complex-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Eipr1 PE=1 SV=1"	"Q5PPK9"	"EARP and GARP complex-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Eipr1 PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"808.44635"	"1615.88542"	"1615.88527"	"0.10"	"0.00008"	"8/126"	"8"	"126"	"298972.067321777"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"58.7473"	"18903"	"18903"	"18879"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.4"	""	"23.2"	""	"20.4"	""	"28.7"	""	"28.6"	"36.5"	""	"954"	"23"	"36.000"	"29.000"	"0.240169790391831"	"24"	"0.0008629"	"0.01041"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIDPEETVK"	"[K].iDIDPEETVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"808.96021"	"1616.91313"	"1616.91472"	"-0.98"	"-0.00080"	"7/84"	"7"	"84"	"123587.770446777"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"83.3387"	"28815"	"28815"	"28811"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.8"	""	"5.0"	""	"9.3"	""	"20.1"	"1.6"	"19.8"	"21.1"	""	"951"	"16"	"36.000"	"29.000"	"1.1432745114033"	"22"	"0.003967"	"0.04108"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIDPEETVK"	"[K].iDIDPEETVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"808.96057"	"1616.91387"	"1616.91472"	"-0.53"	"-0.00043"	"8/84"	"8"	"84"	"457341.385070801"	"HCD"	"MS2"	"0"	"35.9"	"100.000"	"83.6177"	"28926"	"28926"	"28911"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.4"	""	"28.0"	""	"40.2"	""	"75.1"	""	"76.0"	"74.0"	""	"951"	"47"	"36.000"	"29.000"	"0.000897739886495287"	"25"	"0.0001301"	"0.004325"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIDPEETVK"	"[K].iDIDPEETVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"539.64288"	"1616.91410"	"1616.91472"	"-0.39"	"-0.00021"	"8/84"	"8"	"84"	"889257.741149902"	"HCD"	"MS2"	"39.10714"	"24.6"	"100.000"	"83.5038"	"28878"	"28878"	"28867"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.4"	""	"19.6"	""	"28.7"	""	"54.5"	""	"50.8"	"43.9"	""	"953"	"35"	"36.000"	"29.000"	"0.0143900699477156"	""	"0"	"0.0007994"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIDPEETVK"	"[K].iDIDPEETVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"539.64294"	"1616.91428"	"1616.91472"	"-0.27"	"-0.00015"	"11/84"	"11"	"84"	"862240.750976563"	"HCD"	"MS2"	"41.84045"	"24.1"	"100.000"	"83.5086"	"28882"	"28882"	"28869"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.0"	""	"24.5"	""	"27.5"	""	"49.7"	""	"50.3"	"47.2"	""	"950"	"36"	"36.000"	"29.000"	"0.0128734102514815"	""	"0"	"0.0003304"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIDPEETVK"	"[K].iDIDPEETVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"808.96094"	"1616.91460"	"1616.91472"	"-0.08"	"-0.00006"	"13/84"	"13"	"84"	"462267.679321289"	"HCD"	"MS2"	"0"	"36.3"	"100.000"	"83.6241"	"28926"	"28926"	"28910"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.8"	""	"25.3"	""	"36.5"	""	"83.2"	"0.3"	"70.6"	"78.9"	""	"953"	"38"	"36.000"	"29.000"	"0.00711316536164392"	"24"	"0.0003538"	"0.006852"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIDPEETVK"	"[K].iDIDPEETVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"808.96118"	"1616.91509"	"1616.91472"	"0.22"	"0.00018"	"8/84"	"8"	"84"	"151639.626403809"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"83.3394"	"28817"	"28817"	"28806"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.3"	""	"10.7"	""	"11.7"	""	"28.4"	""	"27.4"	"26.4"	""	"960"	"21"	"36.000"	"29.000"	"0.358295404036832"	"22"	"0.004069"	"0.04415"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVQAAVLHVDQTA"	"[K].hVQAAVLHVDQTA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"809.44720"	"1617.88713"	"1617.89102"	"-2.40"	"-0.00194"	"10/116"	"10"	"116"	"135647.821350098"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"44.4136"	"13063"	"13063"	"13032"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.6"	""	"7.5"	""	"5.5"	""	"9.1"	""	"11.5"	"11.4"	""	"1058"	"29"	"37.000"	"30.000"	"0.0652312456778092"	"16"	"0.004542"	"0.04933"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDDNEALIEK"	"[K].lDDNEALIEk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6AYB5"	"Signal recognition particle 54 kDa protein OS=Rattus norvegicus OX=10116 GN=Srp54 PE=2 SV=1"	"Q6AYB5"	"Signal recognition particle 54 kDa protein OS=Rattus norvegicus OX=10116 GN=Srp54 PE=2 SV=1"	"0"	"2"	"2"	"0.2800"	"0.0000"	"1"	"1"	"1"	"809.45947"	"1617.91167"	"1617.90997"	"1.05"	"0.00085"	"9/98"	"9"	"98"	"114224.577697754"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"79.3910"	"27235"	"27235"	"27210"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.6"	""	"9.8"	""	"14.1"	""	"16.7"	""	"25.9"	"17.0"	""	"1038"	"25"	"37.000"	"30.000"	"0.161126642623862"	""	"0.002973"	"0.02966"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISDEDWDIIQR"	"[R].iSDEDWDIIQR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"540.28070"	"1618.82755"	"1618.82742"	"0.08"	"0.00004"	"9/92"	"9"	"92"	"238576.273132324"	"HCD"	"MS2"	"21.28707"	"5.3"	"100.000"	"97.4584"	"34180"	"34180"	"34175"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.5"	""	"4.0"	""	"11.5"	""	"7.5"	""	"11.7"	"7.7"	""	"854"	"21"	"36.000"	"29.000"	"0.355163130260841"	"15"	"0.00736"	"0.08677"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQNTGVADGYPVR"	"[K].lQNTGVADGYPVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"809.93854"	"1618.86980"	"1618.87504"	"-3.23"	"-0.00262"	"4/126"	"4"	"126"	"146144.296386719"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"60.7938"	"19688"	"19688"	"19670"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.4"	""	"14.0"	""	"13.3"	""	"17.1"	"2.6"	"25.6"	"19.8"	""	"1052"	"15"	"37.000"	"30.000"	"1.80711480595334"	"20"	"0.005921"	"0.0684"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADENQTLK"	"[K].eLADENQTLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"809.95581"	"1618.90434"	"1618.90522"	"-0.54"	"-0.00044"	"8/94"	"8"	"94"	"244938.136169434"	"HCD"	"MS2"	"0"	"22.6"	"100.000"	"54.7966"	"17279"	"17279"	"17248"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.2"	""	"21.0"	""	"23.9"	""	"42.5"	""	"47.9"	"46.4"	""	"1041"	"52"	"37.000"	"30.000"	"0.000319463123688276"	"25"	"0"	"0.0002986"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADENQTLK"	"[K].eLADENQTLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"809.95642"	"1618.90557"	"1618.90522"	"0.21"	"0.00017"	"8/94"	"8"	"94"	"235910.046081543"	"HCD"	"MS2"	"0"	"21.3"	"100.000"	"54.4652"	"17157"	"17157"	"17129"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.1"	""	"17.2"	""	"19.4"	""	"48.2"	"0.6"	"39.1"	"37.8"	""	"1042"	"49"	"37.000"	"30.000"	"0.000663495105209681"	"25"	"0"	"0.0004341"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGAEGAVLDEAK"	"[K].tGAEGAVLDEAk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9; Q6QLM7"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1; Kinesin heavy chain isoform 5A OS=Rattus norvegicus OX=10116 GN=Kif5a PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"809.95660"	"1618.90593"	"1618.90522"	"0.44"	"0.00035"	"13/106"	"13"	"106"	"239511.43182373"	"HCD"	"MS2"	"0"	"18.1"	"100.000"	"60.5508"	"19591"	"19591"	"19568"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.9"	""	"22.6"	""	"19.3"	""	"32.6"	"0.6"	"34.4"	"41.5"	""	"1038"	"32"	"37.000"	"30.000"	"0.0342111251631803"	"23"	"0"	"0.00164"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAMDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"810.41528"	"1619.82329"	"1619.82604"	"-1.70"	"-0.00137"	"5/118"	"5"	"118"	"102640.124938965"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"75.7155"	"25758"	"25758"	"25735"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.0"	""	"5.8"	""	"7.2"	""	"9.1"	""	"14.5"	"16.9"	""	"885"	"11"	"36.000"	"29.000"	"3.71461044034833"	"18"	"0.005067"	"0.05735"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAMDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"540.61316"	"1619.82492"	"1619.82604"	"-0.69"	"-0.00037"	"15/118"	"15"	"118"	"1344208.58135986"	"HCD"	"MS2"	"9.523481"	"14.9"	"100.000"	"75.1663"	"25536"	"25536"	"25518"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.5"	""	"19.0"	""	"20.5"	""	"26.3"	""	"24.5"	"28.7"	""	"882"	"60"	"36.000"	"29.000"	"4.92536692271227E-05"	""	"0"	"3.133E-05"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAMDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"3"	"3"	"0.8167"	"0.0000"	"1"	"1"	"1"	"540.61316"	"1619.82492"	"1619.82604"	"-0.69"	"-0.00037"	"14/118"	"14"	"118"	"1949260.92816162"	"HCD"	"MS2"	"12.34175"	"17.0"	"100.000"	"75.3473"	"25598"	"25598"	"25579"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.6"	""	"13.9"	""	"27.6"	""	"22.0"	""	"32.0"	"41.7"	""	"882"	"60"	"36.000"	"29.000"	"3.94855861607371E-05"	"27"	"0"	"0.0001062"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAMDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.8553"	"0.0000"	"1"	"1"	"1"	"810.41614"	"1619.82500"	"1619.82604"	"-0.64"	"-0.00052"	"8/118"	"8"	"118"	"1880154.41821289"	"HCD"	"MS2"	"0"	"49.9"	"100.000"	"75.3950"	"25629"	"25629"	"25614"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"80.8"	""	"63.3"	""	"77.5"	""	"53.7"	"0.1"	"101.1"	"96.7"	""	"893"	"76"	"36.000"	"29.000"	"1.02051986570713E-06"	"29"	"0"	"6.794E-07"	"1.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAMDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"810.41650"	"1619.82573"	"1619.82604"	"-0.19"	"-0.00015"	"10/118"	"10"	"118"	"782660.281677246"	"HCD"	"MS2"	"0"	"43.1"	"100.000"	"75.0925"	"25506"	"25506"	"25487"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.0"	""	"60.5"	""	"59.9"	""	"59.7"	"0.8"	"83.5"	"78.4"	""	"897"	"38"	"36.000"	"29.000"	"0.0068986235617591"	"21"	"0"	"0.0001021"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAMDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"810.41650"	"1619.82573"	"1619.82604"	"-0.19"	"-0.00015"	"9/118"	"9"	"118"	"978184.422973633"	"HCD"	"MS2"	"35.87594"	"53.1"	"100.000"	"75.2317"	"25551"	"25551"	"25534"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.3"	""	"73.1"	""	"79.0"	""	"71.3"	""	"96.1"	"95.1"	""	"897"	"56"	"36.000"	"29.000"	"0.000125245591279495"	"24"	"0"	"4.286E-06"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAMDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"810.41656"	"1619.82585"	"1619.82604"	"-0.11"	"-0.00009"	"7/118"	"7"	"118"	"108562.371032715"	"HCD"	"MS2"	"11.17381"	"6.5"	"100.000"	"75.8365"	"25797"	"25797"	"25778"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.1"	""	"8.0"	""	"9.4"	""	"9.6"	""	"14.8"	"9.2"	""	"899"	"26"	"36.000"	"29.000"	"0.116340170536131"	"16"	"0"	"0.003187"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAMDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.8553"	"0.0000"	"1"	"1"	"1"	"810.41669"	"1619.82610"	"1619.82604"	"0.04"	"0.00003"	"8/118"	"8"	"118"	"1738361.36151123"	"HCD"	"MS2"	"0"	"80.3"	"100.000"	"75.5367"	"25676"	"25676"	"25659"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"137.9"	""	"102.6"	""	"124.9"	""	"76.5"	"0.9"	"158.1"	"159.9"	""	"894"	"76"	"36.000"	"29.000"	"1.0287444923816E-06"	"28"	"0"	"5.533E-07"	"1.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVGAEGPSMADTR"	"[R].iSVGAEGPSMADTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97608"	"5-oxoprolinase OS=Rattus norvegicus OX=10116 GN=Oplah PE=1 SV=2"	"P97608"	"5-oxoprolinase OS=Rattus norvegicus OX=10116 GN=Oplah PE=1 SV=2"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"810.41766"	"1619.82805"	"1619.82604"	"1.24"	"0.00101"	"6/126"	"6"	"126"	"130075.585083008"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"62.2235"	"20267"	"20267"	"20248"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.5"	""	"13.7"	""	"12.3"	""	"9.0"	""	"16.6"	"18.7"	""	"923"	"34"	"36.000"	"29.000"	"0.019238522047156"	"28"	"0"	"0.003066"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSLEASLAETEGR"	"[K].qSLEASLAETEGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"810.42468"	"1619.84209"	"1619.84379"	"-1.05"	"-0.00085"	"9/138"	"9"	"138"	"434121.968139648"	"HCD"	"MS2"	"0"	"25.9"	"100.000"	"63.5426"	"20817"	"20817"	"20795"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.3"	""	"27.4"	""	"31.4"	""	"48.5"	"1.0"	"42.1"	"42.5"	""	"1015"	"60"	"37.000"	"30.000"	"4.80215359393139E-05"	"24"	"0"	"2.259E-06"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSLEASLAETEGR"	"[K].qSLEASLAETEGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"2"	"2"	"0.7544"	"0.0000"	"1"	"1"	"1"	"810.42480"	"1619.84233"	"1619.84379"	"-0.90"	"-0.00073"	"14/138"	"14"	"138"	"336335.494812012"	"HCD"	"MS2"	"7.860651"	"19.7"	"100.000"	"63.8398"	"20938"	"20938"	"20917"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.9"	""	"23.9"	""	"22.2"	""	"31.6"	""	"35.4"	"34.8"	""	"1003"	"57"	"37.000"	"30.000"	"0.000105019739660922"	"30"	"0"	"1.874E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSLEASLAETEGR"	"[K].qSLEASLAETEGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"3"	"3"	"0.8393"	"0.0000"	"1"	"1"	"1"	"540.61908"	"1619.84269"	"1619.84379"	"-0.68"	"-0.00037"	"15/138"	"15"	"138"	"1068773.29296875"	"HCD"	"MS2"	"61.02787"	"17.9"	"100.000"	"63.5863"	"20835"	"20835"	"20811"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.1"	""	"21.5"	""	"25.9"	""	"35.0"	""	"31.9"	"36.3"	""	"1003"	"56"	"37.000"	"30.000"	"0.000138124569472409"	"25"	"0"	"4.53E-06"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSLEASLAETEGR"	"[K].qSLEASLAETEGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"3"	"3"	"0.8448"	"0.0000"	"1"	"1"	"1"	"540.61914"	"1619.84287"	"1619.84379"	"-0.57"	"-0.00031"	"15/138"	"15"	"138"	"1121792.90808105"	"HCD"	"MS2"	"28.04683"	"16.8"	"100.000"	"63.8091"	"20911"	"20911"	"20888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.4"	""	"19.0"	""	"24.4"	""	"29.2"	""	"30.0"	"32.6"	""	"1022"	"58"	"37.000"	"30.000"	"8.98298966732892E-05"	"25"	"0"	"1.27E-05"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSLEASLAETEGR"	"[K].qSLEASLAETEGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"2"	"2"	"0.8548"	"0.0000"	"1"	"1"	"1"	"810.42542"	"1619.84355"	"1619.84379"	"-0.15"	"-0.00012"	"18/138"	"18"	"138"	"347855.479187012"	"HCD"	"MS2"	"10.78507"	"20.2"	"100.000"	"63.9590"	"20972"	"20972"	"20951"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.4"	""	"25.0"	""	"22.3"	""	"40.0"	""	"32.0"	"38.7"	""	"1041"	"62"	"37.000"	"30.000"	"3.05788207991749E-05"	"26"	"0"	"1.841E-06"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSLEASLAETEGR"	"[K].qSLEASLAETEGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"2"	"2"	"0.8873"	"0.0000"	"1"	"1"	"1"	"810.42572"	"1619.84416"	"1619.84379"	"0.23"	"0.00018"	"10/138"	"10"	"138"	"409423.081848145"	"HCD"	"MS2"	"14.12432"	"22.4"	"100.000"	"63.6639"	"20852"	"20852"	"20827"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.5"	""	"22.7"	""	"34.5"	""	"42.8"	""	"32.9"	"38.7"	""	"1042"	"71"	"37.000"	"30.000"	"3.76563067676731E-06"	"25"	"0"	"3.027E-07"	"1.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTDVHPDYGAR"	"[K].nFTDVHPDYGAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"540.93689"	"1620.79612"	"1620.79679"	"-0.41"	"-0.00022"	"9/120"	"9"	"120"	"18263494.0003662"	"HCD"	"MS2"	"3.009785"	"97.4"	"46.189"	"48.4895"	"14722"	"14722"	"14704"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"178.4"	"2.3"	"136.4"	""	"140.4"	""	"145.7"	"1.2"	"161.6"	"154.9"	""	"705"	"54"	"35.000"	"28.000"	"0.000149678396291075"	"18"	"0"	"8.667E-06"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTDVHPDYGAR"	"[K].nFTDVHPDYGAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"810.90173"	"1620.79619"	"1620.79679"	"-0.37"	"-0.00030"	"12/120"	"12"	"120"	"288609.45703125"	"HCD"	"MS2"	"0"	"17.8"	"100.000"	"48.3997"	"14686"	"14686"	"14658"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.1"	""	"21.8"	""	"21.9"	""	"25.4"	""	"36.5"	"34.9"	""	"705"	"25"	"35.000"	"28.000"	"0.114066764067694"	"15"	"0"	"0.001045"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTDVHPDYGAR"	"[K].nFTDVHPDYGAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"540.93707"	"1620.79667"	"1620.79679"	"-0.07"	"-0.00004"	"9/120"	"9"	"120"	"6130605.06121826"	"HCD"	"MS2"	"18.50186"	"79.3"	"100.000"	"48.6013"	"14755"	"14755"	"14732"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"140.2"	""	"100.5"	""	"116.4"	""	"131.2"	""	"135.9"	"125.4"	""	"713"	"56"	"35.000"	"28.000"	"8.242510976976E-05"	"16"	"0"	"6.212E-06"	"0.948"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTDVHPDYGAR"	"[K].nFTDVHPDYGAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"540.93726"	"1620.79721"	"1620.79679"	"0.26"	"0.00014"	"9/120"	"9"	"120"	"6184670.14385986"	"HCD"	"MS2"	"24.03049"	"84.6"	"100.000"	"48.1972"	"14603"	"14603"	"14578"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"163.2"	""	"110.5"	""	"109.6"	""	"133.8"	"0.6"	"144.5"	"137.8"	""	"713"	"55"	"35.000"	"28.000"	"0.00010234332774918"	"16"	"0"	"7.995E-06"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTDVHPDYGAR"	"[K].nFTDVHPDYGAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.9273"	"0.0000"	"1"	"1"	"1"	"540.93738"	"1620.79758"	"1620.79679"	"0.49"	"0.00027"	"9/120"	"9"	"120"	"18148800.6765137"	"HCD"	"MS2"	"2.468171"	"111.5"	"52.502"	"48.8891"	"14873"	"14873"	"14856"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"214.8"	""	"150.2"	""	"170.1"	""	"164.6"	""	"178.0"	"176.7"	""	"716"	"55"	"35.000"	"28.000"	"0.000102301741452823"	"20"	"0"	"9.968E-06"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTDVHPDYGAR"	"[K].nFTDVHPDYGAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"810.90344"	"1620.79961"	"1620.79679"	"1.74"	"0.00141"	"9/120"	"9"	"120"	"214452.867980957"	"HCD"	"MS2"	"0"	"15.8"	"100.000"	"48.7623"	"14821"	"14821"	"14796"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.2"	""	"22.9"	""	"21.8"	""	"20.1"	""	"26.8"	"30.4"	""	"732"	"15"	"35.000"	"28.000"	"1.24589397430566"	"13"	"0.004942"	"0.05513"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYDPVPEVK"	"[K].eSYDPVPEVk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4V8F9"	"Hydroxysteroid dehydrogenase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Hsdl2 PE=2 SV=1"	"Q4V8F9"	"Hydroxysteroid dehydrogenase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Hsdl2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"810.94696"	"1620.88664"	"1620.88851"	"-1.15"	"-0.00093"	"10/86"	"10"	"86"	"199711.788146973"	"HCD"	"MS2"	"100"	"17.3"	"100.000"	"69.3508"	"23164"	"23164"	"23139"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.0"	""	"19.5"	""	"22.6"	""	"27.1"	""	"34.0"	"32.3"	""	"1093"	"17"	"37.000"	"30.000"	"1.1657090450346"	"14"	"0.0006732"	"0.009142"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYDPVPEVK"	"[K].eSYDPVPEVk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4V8F9"	"Hydroxysteroid dehydrogenase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Hsdl2 PE=2 SV=1"	"Q4V8F9"	"Hydroxysteroid dehydrogenase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Hsdl2 PE=2 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"810.94763"	"1620.88799"	"1620.88851"	"-0.32"	"-0.00026"	"9/86"	"9"	"86"	"199515.673706055"	"HCD"	"MS2"	"26.65294"	"14.9"	"100.000"	"69.1831"	"23110"	"23110"	"23086"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.9"	""	"15.3"	""	"13.9"	""	"26.6"	""	"34.1"	"31.1"	""	"1068"	"24"	"37.000"	"30.000"	"0.195227618721408"	"15"	"0.00736"	"0.08658"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYDPVPEVK"	"[K].eSYDPVPEVk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4V8F9"	"Hydroxysteroid dehydrogenase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Hsdl2 PE=2 SV=1"	"Q4V8F9"	"Hydroxysteroid dehydrogenase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Hsdl2 PE=2 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"810.94818"	"1620.88909"	"1620.88851"	"0.36"	"0.00029"	"9/86"	"9"	"86"	"160539.784057617"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"69.4780"	"23230"	"23230"	"23208"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.4"	""	"10.6"	""	"12.7"	""	"17.8"	""	"30.8"	"25.0"	""	"1093"	"19"	"37.000"	"30.000"	"0.628912412558134"	"16"	"0.006834"	"0.07974"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYDPVPEVK"	"[K].eSYDPVPEVk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4V8F9"	"Hydroxysteroid dehydrogenase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Hsdl2 PE=2 SV=1"	"Q4V8F9"	"Hydroxysteroid dehydrogenase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Hsdl2 PE=2 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"810.95026"	"1620.89324"	"1620.88851"	"2.92"	"0.00236"	"9/86"	"9"	"86"	"104088.720214844"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"69.7055"	"23309"	"23309"	"23283"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.1"	""	"10.9"	""	"10.5"	""	"15.9"	""	"21.3"	"17.0"	""	"1044"	"27"	"37.000"	"30.000"	"0.107070665734694"	"20"	"0.004942"	"0.05384"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDKNELVQK"	"[-].mDkNELVQk.[A]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K3(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"1"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"540.97217"	"1620.90195"	"1620.90311"	"-0.72"	"-0.00039"	"7/82"	"7"	"82"	"1485876.95257568"	"HCD"	"MS2"	"7.56297"	"51.2"	"100.000"	"53.2414"	"16648"	"16648"	"16627"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.0"	""	"58.0"	""	"58.0"	""	"120.4"	"1.1"	"93.4"	"86.7"	""	"1029"	"28"	"37.000"	"30.000"	"0.0738559313460456"	"17"	"0.0008629"	"0.01037"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDKNELVQK"	"[-].mDkNELVQk.[A]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K3(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"1"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"540.97241"	"1620.90268"	"1620.90311"	"-0.27"	"-0.00014"	"7/82"	"7"	"82"	"1661335.74505615"	"HCD"	"MS2"	"19.16631"	"58.5"	"100.000"	"52.9023"	"16521"	"16521"	"16497"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"82.9"	""	"56.3"	""	"69.1"	""	"129.6"	"1.0"	"108.5"	"106.7"	""	"1040"	"28"	"37.000"	"30.000"	"0.082035786024366"	"17"	"0.001728"	"0.02016"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTGVTEEALK"	"[R].nTTGVTEEALk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"810.96381"	"1620.92034"	"1620.92087"	"-0.33"	"-0.00027"	"17/112"	"17"	"112"	"1074870.34802246"	"HCD"	"MS2"	"0"	"87.3"	"100.000"	"53.9360"	"16943"	"16943"	"16923"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"92.3"	""	"105.2"	""	"109.7"	""	"107.2"	""	"184.8"	"232.0"	""	"1010"	"64"	"37.000"	"30.000"	"2.11490750384549E-05"	"28"	"0"	"3.215E-06"	"1.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTGVTEEALK"	"[R].nTTGVTEEALk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.7317"	"0.0000"	"1"	"1"	"1"	"540.97839"	"1620.92063"	"1620.92087"	"-0.15"	"-0.00008"	"8/112"	"8"	"112"	"2703831.5368042"	"HCD"	"MS2"	"18.26642"	"70.3"	"100.000"	"53.6298"	"16818"	"16818"	"16796"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"76.4"	""	"79.9"	""	"73.9"	""	"105.3"	"2.0"	"145.6"	"185.8"	""	"1007"	"41"	"37.000"	"30.000"	"0.00377571734398891"	"26"	"0"	"4.499E-05"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTGVTEEALK"	"[R].nTTGVTEEALk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8103"	"0.0000"	"1"	"1"	"1"	"810.96399"	"1620.92070"	"1620.92087"	"-0.11"	"-0.00009"	"16/112"	"16"	"112"	"1183302.73309326"	"HCD"	"MS2"	"7.704439"	"97.8"	"100.000"	"53.6089"	"16810"	"16810"	"16780"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"113.5"	""	"132.3"	""	"119.3"	""	"135.5"	""	"186.9"	"242.1"	""	"1006"	"58"	"37.000"	"30.000"	"7.862632642484E-05"	"27"	"0"	"5.128E-06"	"0.966"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTGVTEEALK"	"[R].nTTGVTEEALk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"810.96429"	"1620.92131"	"1620.92087"	"0.27"	"0.00022"	"10/112"	"10"	"112"	"2065248.84143066"	"HCD"	"MS2"	"0"	"163.9"	"100.000"	"53.9315"	"16930"	"16930"	"16912"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"189.0"	""	"196.3"	""	"198.7"	""	"217.9"	"1.0"	"319.8"	"435.2"	""	"1008"	"60"	"37.000"	"30.000"	"5.1218934120683E-05"	"28"	"0"	"1.076E-05"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTGVTEEALK"	"[R].nTTGVTEEALk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"810.96436"	"1620.92143"	"1620.92087"	"0.35"	"0.00028"	"16/112"	"16"	"112"	"331597.613952637"	"HCD"	"MS2"	"0"	"28.2"	"100.000"	"54.2906"	"17077"	"17077"	"17056"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.4"	""	"37.5"	""	"39.0"	""	"33.1"	""	"59.2"	"69.6"	""	"1003"	"62"	"37.000"	"30.000"	"3.02880237632255E-05"	""	"0"	"8.942E-06"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTGVTEEALK"	"[R].nTTGVTEEALk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.7805"	"0.0000"	"1"	"1"	"1"	"540.97882"	"1620.92191"	"1620.92087"	"0.64"	"0.00035"	"9/112"	"9"	"112"	"3703005.730896"	"HCD"	"MS2"	"14.11699"	"95.3"	"100.000"	"53.9385"	"16933"	"16933"	"16912"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"102.5"	""	"113.3"	""	"116.7"	""	"134.4"	""	"195.8"	"245.0"	""	"999"	"41"	"36.000"	"29.000"	"0.00416423751717507"	"24"	"0"	"8.429E-05"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTDVHPDYGAR"	"[K].nFTDVHPDYGAR.[V]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"541.26471"	"1621.77958"	"1621.78080"	"-0.76"	"-0.00041"	"6/120"	"6"	"120"	"1439877.02081299"	"HCD"	"MS2"	"20.95841"	"26.3"	"100.000"	"57.6232"	"18444"	"18444"	"18421"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.5"	""	"38.3"	""	"32.6"	""	"41.7"	""	"51.0"	"53.0"	""	"570"	"10"	"34.000"	"27.000"	"2.99119592165912"	"13"	"0.0004639"	"0.007626"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSLDPENPTK"	"[R].ySLDPENPTk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"811.44513"	"1621.88298"	"1621.88376"	"-0.48"	"-0.00039"	"11/92"	"11"	"92"	"327345.022766113"	"HCD"	"MS2"	"13.24528"	"25.4"	"100.000"	"64.9716"	"21394"	"21394"	"21374"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.6"	""	"47.1"	""	"37.7"	""	"41.7"	""	"41.5"	"24.7"	""	"966"	"30"	"36.000"	"29.000"	"0.045388635900272"	"14"	"0.0008629"	"0.00958"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSLDPENPTK"	"[R].ySLDPENPTk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"0.9057"	"0.0000"	"1"	"1"	"1"	"811.44519"	"1621.88310"	"1621.88376"	"-0.40"	"-0.00033"	"14/92"	"14"	"92"	"430944.202575684"	"HCD"	"MS2"	"5.783803"	"33.3"	"100.000"	"65.1055"	"21433"	"21433"	"21415"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.7"	""	"58.4"	""	"55.4"	""	"57.6"	""	"52.5"	"27.8"	""	"966"	"53"	"36.000"	"29.000"	"0.000250004099832124"	"21"	"0"	"0.0006313"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSLDPENPTK"	"[R].ySLDPENPTk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"811.44550"	"1621.88371"	"1621.88376"	"-0.03"	"-0.00002"	"11/92"	"11"	"92"	"303254.739562988"	"HCD"	"MS2"	"8.478572"	"23.7"	"100.000"	"65.2893"	"21523"	"21523"	"21501"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.2"	""	"46.5"	""	"35.0"	""	"43.9"	""	"41.0"	"26.3"	""	"977"	"32"	"36.000"	"29.000"	"0.0307513770325741"	"15"	"0.0023"	"0.0237"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYSSPGSPGTPGSR"	"[R].sGYSSPGSPGTPGSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"811.90186"	"1622.79643"	"1622.79718"	"-0.46"	"-0.00037"	"7/138"	"7"	"138"	"222744.313110352"	"HCD"	"MS2"	"100"	"12.5"	"100.000"	"30.8359"	"7555"	"7555"	"7539"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.8"	""	"15.7"	""	"15.2"	""	"29.8"	""	"27.8"	"19.4"	""	"676"	"18"	"35.000"	"28.000"	"0.562233475825117"	"14"	"0"	"0.0004488"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYSSPGSPGTPGSR"	"[R].sGYSSPGSPGTPGSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"811.90259"	"1622.79790"	"1622.79718"	"0.44"	"0.00036"	"7/138"	"7"	"138"	"277981.749633789"	"HCD"	"MS2"	"0"	"14.7"	"100.000"	"30.8867"	"7564"	"7564"	"7544"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.3"	""	"18.9"	""	"23.5"	""	"30.0"	""	"28.0"	"22.2"	""	"680"	"37"	"35.000"	"28.000"	"0.00740421322600074"	"15"	"0"	"0.0002807"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"811.91724"	"1622.82720"	"1622.82973"	"-1.56"	"-0.00126"	"5/102"	"5"	"102"	"51724.1587524414"	"HCD"	"MS2"	"0"	"1.9"	"100.000"	"93.1255"	"32615"	"32615"	"32597"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.5"	""	"1.7"	""	"2.2"	""	""	""	"4.8"	"6.5"	""	"862"	"30"	"36.000"	"29.000"	"0.0475857885177793"	"22"	"0.0004639"	"0.00746"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"811.91724"	"1622.82720"	"1622.82973"	"-1.56"	"-0.00126"	"5/102"	"5"	"102"	"68972.3325805664"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"91.0668"	"31837"	"31837"	"31822"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.8"	""	"2.6"	""	"4.9"	""	"2.4"	""	"6.3"	"7.0"	""	"862"	"29"	"36.000"	"29.000"	"0.054010384639975"	"22"	"0.001211"	"0.01456"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"811.91754"	"1622.82781"	"1622.82973"	"-1.18"	"-0.00096"	"5/102"	"5"	"102"	"111910.487976074"	"HCD"	"MS2"	"44.07515"	"2.6"	"100.000"	"91.5195"	"32010"	"32010"	"31992"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.0"	""	"3.0"	""	"2.0"	""	"3.2"	""	"5.2"	"5.0"	""	"868"	"14"	"36.000"	"29.000"	"1.71984666866861"	"13"	"0.004606"	"0.04942"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"811.91772"	"1622.82817"	"1622.82973"	"-0.96"	"-0.00078"	"4/102"	"4"	"102"	"59814.9976196289"	"HCD"	"MS2"	"32.71496"	"2.7"	"100.000"	"89.5547"	"31244"	"31244"	"31226"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.3"	""	"2.5"	""	"4.2"	""	""	""	"7.7"	"7.3"	""	"865"	"13"	"36.000"	"29.000"	"1.97235966148936"	"15"	"0.001812"	"0.02081"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"811.91785"	"1622.82842"	"1622.82973"	"-0.81"	"-0.00065"	"3/102"	"3"	"102"	"50810.2222900391"	"HCD"	"MS2"	"0"	"2.0"	"100.000"	"93.1253"	"32629"	"32629"	"32612"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	"4.4"	""	"2.0"	""	"3.0"	""	"3.5"	"6.1"	""	"869"	"2"	"36.000"	"29.000"	"28.7733070858416"	"13"	"0.005874"	"0.06651"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"811.91803"	"1622.82878"	"1622.82973"	"-0.58"	"-0.00047"	"5/102"	"5"	"102"	"57268.2959594727"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"90.7843"	"31725"	"31725"	"31707"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.0"	""	"2.1"	""	"2.4"	""	"3.8"	""	"5.7"	"4.1"	""	"878"	"23"	"36.000"	"29.000"	"0.197908533293701"	"15"	"0.001374"	"0.01621"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"811.91803"	"1622.82878"	"1622.82973"	"-0.58"	"-0.00047"	"9/102"	"9"	"102"	"1121695.75689697"	"HCD"	"MS2"	"33.74794"	"46.4"	"100.000"	"85.8002"	"29781"	"29781"	"29768"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.3"	""	"46.2"	""	"63.2"	""	"99.6"	""	"87.0"	"80.0"	""	"878"	"33"	"36.000"	"29.000"	"0.0244041968941707"	"28"	"0"	"0.0009441"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"4"	"811.91809"	"1622.82891"	"1622.82973"	"-0.51"	"-0.00041"	"3/102"	"3"	"102"	"94486.698425293"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"92.7617"	"32477"	"32477"	"32464"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.7"	""	"2.2"	""	"4.2"	""	"3.0"	""	"5.1"	"2.3"	""	"880"	"0"	"36.000"	"29.000"	"40.4066342452776"	"13"	"0.007339"	"0.08432"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.9296"	"0.0000"	"1"	"1"	"1"	"811.91809"	"1622.82891"	"1622.82973"	"-0.51"	"-0.00041"	"10/102"	"10"	"102"	"579886.93572998"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"86.0731"	"29889"	"29889"	"29879"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.9"	""	"23.8"	""	"25.3"	""	"54.8"	""	"42.1"	"34.9"	""	"880"	"71"	"36.000"	"29.000"	"3.73639409015978E-06"	"22"	"0"	"2.979E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"811.91815"	"1622.82903"	"1622.82973"	"-0.43"	"-0.00035"	"5/102"	"5"	"102"	"48528.1629638672"	"HCD"	"MS2"	"0"	"1.7"	"100.000"	"90.2183"	"31503"	"31503"	"31489"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.6"	""	"3.4"	""	"2.1"	""	""	""	"2.7"	"5.2"	""	"880"	"26"	"36.000"	"29.000"	"0.110015195914643"	"23"	"0.001374"	"0.01603"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.3276"	"0.0000"	"1"	"1"	"1"	"811.91815"	"1622.82903"	"1622.82973"	"-0.43"	"-0.00035"	"8/102"	"8"	"102"	"1117382.3928833"	"HCD"	"MS2"	"47.25769"	"43.8"	"100.000"	"85.8005"	"29782"	"29782"	"29770"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.1"	""	"49.8"	""	"57.9"	""	"82.5"	"0.0"	"83.5"	"78.9"	""	"880"	"58"	"36.000"	"29.000"	"7.03805532590454E-05"	""	"0"	"5.267E-05"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"811.91821"	"1622.82915"	"1622.82973"	"-0.36"	"-0.00029"	"4/102"	"4"	"102"	"62369.8220214844"	"HCD"	"MS2"	"0"	"2.0"	"100.000"	"92.7786"	"32498"	"32498"	"32483"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.4"	""	""	""	"3.1"	""	"2.7"	""	"4.3"	"5.8"	""	"874"	"16"	"36.000"	"29.000"	"1.07024063668615"	"16"	"0.003111"	"0.03089"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"811.91821"	"1622.82915"	"1622.82973"	"-0.36"	"-0.00029"	"5/102"	"5"	"102"	"79497.4693603516"	"HCD"	"MS2"	"0"	"1.7"	"100.000"	"89.8143"	"31348"	"31348"	"31330"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.4"	""	"2.5"	""	"3.7"	""	"1.9"	""	"5.2"	""	""	"874"	"22"	"36.000"	"29.000"	"0.257917872035096"	"15"	"0.001374"	"0.01688"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"811.91827"	"1622.82927"	"1622.82973"	"-0.28"	"-0.00023"	"4/102"	"4"	"102"	"54664.4092407227"	"HCD"	"MS2"	"0"	"2.4"	"100.000"	"90.4941"	"31609"	"31609"	"31598"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.9"	""	"2.4"	""	"3.3"	""	""	""	"4.9"	"5.4"	""	"875"	"18"	"36.000"	"29.000"	"0.693390771701737"	"16"	"0.002379"	"0.02453"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"811.91840"	"1622.82952"	"1622.82973"	"-0.13"	"-0.00011"	"4/102"	"4"	"102"	"89238.1653442383"	"HCD"	"MS2"	"33.33701"	"2.6"	"100.000"	"91.4323"	"31971"	"31971"	"31954"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.5"	""	"1.3"	""	"4.2"	""	"1.9"	""	"5.0"	"5.4"	""	"876"	"1"	"36.000"	"29.000"	"32.6192604570823"	"13"	"0.004942"	"0.0546"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"811.91846"	"1622.82964"	"1622.82973"	"-0.05"	"-0.00004"	"5/102"	"5"	"102"	"66235.7462158203"	"HCD"	"MS2"	"0"	"1.9"	"100.000"	"89.9360"	"31392"	"31392"	"31374"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	"2.7"	""	"3.4"	""	"2.4"	""	"4.4"	"5.5"	""	"900"	"23"	"36.000"	"29.000"	"0.242779780131807"	"15"	"0.0008629"	"0.009547"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"811.91852"	"1622.82976"	"1622.82973"	"0.02"	"0.00002"	"4/102"	"4"	"102"	"56763.0628662109"	"HCD"	"MS2"	"0"	"1.9"	"100.000"	"90.2917"	"31528"	"31528"	"31515"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.1"	""	"1.7"	""	""	""	"4.4"	""	"4.2"	"3.8"	""	"900"	"19"	"36.000"	"29.000"	"0.553620946865571"	"17"	"0.001886"	"0.02199"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.9639"	"0.0000"	"1"	"1"	"1"	"811.91852"	"1622.82976"	"1622.82973"	"0.02"	"0.00002"	"11/102"	"11"	"102"	"617432.266235352"	"HCD"	"MS2"	"0"	"20.9"	"100.000"	"86.1011"	"29902"	"29902"	"29888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.8"	""	"25.1"	""	"30.2"	""	"52.0"	""	"34.4"	"31.3"	""	"900"	"83"	"36.000"	"29.000"	"2.52471589214611E-07"	"21"	"0"	"6.223E-06"	"0.948"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"811.91858"	"1622.82988"	"1622.82973"	"0.10"	"0.00008"	"5/102"	"5"	"102"	"68667.9470214844"	"HCD"	"MS2"	"12.91121"	"3.0"	"100.000"	"92.4836"	"32371"	"32371"	"32353"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.3"	""	"4.5"	""	"5.2"	""	"3.0"	""	"4.0"	"6.8"	""	"900"	"29"	"36.000"	"29.000"	"0.0604244232512038"	"22"	"0.000936"	"0.01235"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"811.91858"	"1622.82988"	"1622.82973"	"0.10"	"0.00008"	"4/102"	"4"	"102"	"85741.8522949219"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"87.9565"	"30629"	"30629"	"30609"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.3"	""	"3.7"	""	"4.0"	""	"4.4"	""	"4.5"	"5.8"	""	"900"	"21"	"36.000"	"29.000"	"0.383895051307915"	"23"	"0.002937"	"0.02796"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"811.91858"	"1622.82988"	"1622.82973"	"0.10"	"0.00008"	"4/102"	"4"	"102"	"88434.3421630859"	"HCD"	"MS2"	"11.59299"	"2.6"	"100.000"	"91.9008"	"32154"	"32154"	"32138"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.9"	""	"2.6"	""	"4.6"	""	"2.9"	""	"5.1"	"6.6"	""	"900"	"17"	"36.000"	"29.000"	"0.908264863656702"	"15"	"0.001134"	"0.01385"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"811.91876"	"1622.83025"	"1622.82973"	"0.32"	"0.00026"	"4/102"	"4"	"102"	"81013.3489379883"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"88.4740"	"30827"	"30827"	"30814"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.2"	""	"4.3"	""	"2.4"	""	"5.1"	""	"3.1"	"4.3"	""	"898"	"12"	"36.000"	"29.000"	"2.87240941131709"	"13"	"0.004942"	"0.05329"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"811.91907"	"1622.83086"	"1622.82973"	"0.70"	"0.00057"	"5/102"	"5"	"102"	"73386.3744506836"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"92.4667"	"32374"	"32374"	"32360"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.4"	""	"3.2"	""	"3.1"	""	"4.4"	""	"6.4"	"4.7"	""	"893"	"23"	"36.000"	"29.000"	"0.231644217381781"	"16"	"0.001886"	"0.02142"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"811.91919"	"1622.83110"	"1622.82973"	"0.85"	"0.00069"	"5/102"	"5"	"102"	"90726.5576171875"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"94.0895"	"32986"	"32986"	"32976"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.0"	""	"5.6"	""	"2.4"	""	"5.5"	""	"6.8"	"4.2"	""	"897"	"29"	"36.000"	"29.000"	"0.0549240365370374"	"17"	"0.001134"	"0.01392"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"811.91968"	"1622.83208"	"1622.82973"	"1.45"	"0.00118"	"5/102"	"5"	"102"	"60263.399230957"	"HCD"	"MS2"	"0"	"2.3"	"100.000"	"91.7641"	"32096"	"32096"	"32084"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.6"	""	"3.2"	""	"2.4"	""	"2.7"	""	"3.8"	"5.5"	""	"899"	"26"	"36.000"	"29.000"	"0.118503095792851"	"17"	"0.001465"	"0.01822"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALTYDGALLGDR"	"[K].eALTYDGALLGDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"541.62390"	"1622.85715"	"1622.85872"	"-0.96"	"-0.00052"	"16/118"	"16"	"118"	"661681.473876953"	"HCD"	"MS2"	"17.53665"	"10.1"	"100.000"	"85.6649"	"29729"	"29729"	"29718"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.3"	""	"9.7"	""	"17.2"	""	"22.4"	""	"14.7"	"16.6"	""	"958"	"64"	"36.000"	"29.000"	"1.92015157743478E-05"	""	"0"	"3.742E-06"	"0.996"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALTYDGALLGDR"	"[K].eALTYDGALLGDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"541.62427"	"1622.85825"	"1622.85872"	"-0.29"	"-0.00016"	"14/118"	"14"	"118"	"800286.831481934"	"HCD"	"MS2"	"36.34761"	"18.3"	"100.000"	"85.6791"	"29735"	"29735"	"29722"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.4"	""	"26.7"	""	"28.9"	""	"30.9"	""	"25.7"	"27.2"	""	"956"	"31"	"36.000"	"29.000"	"0.0376207887474257"	"15"	"0"	"0.001847"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGETLEELMK"	"[R].dGETLEELMk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"0.7576"	"0.0000"	"1"	"1"	"1"	"541.62854"	"1622.87107"	"1622.87114"	"-0.05"	"-0.00003"	"5/84"	"5"	"84"	"353215.065917969"	"HCD"	"MS2"	"22.35023"	"11.9"	"100.000"	"95.0999"	"33357"	"33357"	"33343"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.4"	""	"10.2"	""	"13.6"	""	"16.9"	""	"25.1"	"27.3"	""	"989"	"33"	"36.000"	"29.000"	"0.0230232323247103"	"23"	"0.0001301"	"0.004177"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGETLEELMK"	"[R].dGETLEELMk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"0.8485"	"0.0000"	"1"	"1"	"1"	"541.62854"	"1622.87107"	"1622.87114"	"-0.05"	"-0.00003"	"5/84"	"5"	"84"	"367538.396118164"	"HCD"	"MS2"	"19.96054"	"10.6"	"100.000"	"95.1423"	"33349"	"33349"	"33331"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.9"	""	"9.1"	""	"15.6"	""	"16.0"	""	"20.1"	"22.1"	""	"989"	"33"	"36.000"	"29.000"	"0.0241638591695031"	"20"	"0"	"0.003184"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGETLEELMK"	"[R].dGETLEELMk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"811.93933"	"1622.87139"	"1622.87114"	"0.15"	"0.00012"	"5/84"	"5"	"84"	"153488.044006348"	"HCD"	"MS2"	"100"	"15.3"	"100.000"	"95.1332"	"33345"	"33345"	"33331"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.1"	""	"19.5"	""	"17.9"	""	"24.5"	""	"32.4"	"28.9"	""	"991"	"20"	"36.000"	"29.000"	"0.452943111148508"	"16"	"0.002056"	"0.02263"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGETLEELMK"	"[R].dGETLEELMk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"811.93939"	"1622.87151"	"1622.87114"	"0.22"	"0.00018"	"9/84"	"9"	"84"	"291123.996032715"	"HCD"	"MS2"	"5.188718"	"25.8"	"100.000"	"95.4030"	"33446"	"33446"	"33435"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.2"	""	"23.2"	""	"29.6"	""	"38.5"	"1.5"	"48.2"	"56.2"	""	"991"	"47"	"36.000"	"29.000"	"0.00096614799918011"	"22"	"0"	"0.0001394"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGETLEELMK"	"[R].dGETLEELMk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"811.93994"	"1622.87261"	"1622.87114"	"0.90"	"0.00073"	"9/84"	"9"	"84"	"113710.344055176"	"HCD"	"MS2"	"21.38406"	"8.9"	"100.000"	"95.0349"	"33332"	"33332"	"33319"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.4"	""	"15.2"	""	"10.0"	""	"10.6"	""	"17.8"	"17.1"	""	"997"	"20"	"36.000"	"29.000"	"0.541583173373107"	"20"	"0.00387"	"0.03916"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGETLEELMK"	"[R].dGETLEELMk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.8600"	"0.0000"	"1"	"1"	"1"	"811.93994"	"1622.87261"	"1622.87114"	"0.90"	"0.00073"	"8/84"	"8"	"84"	"337765.417114258"	"HCD"	"MS2"	"0"	"31.9"	"100.000"	"95.3419"	"33443"	"33443"	"33432"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.0"	""	"28.8"	""	"38.7"	""	"45.0"	"0.6"	"69.9"	"68.3"	""	"997"	"50"	"36.000"	"29.000"	"0.000496209600549736"	"22"	"0"	"5.321E-05"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFSDGHSEFLK"	"[R].DLFSDGHSEFLk.[A]"	"K12(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"541.94513"	"1623.82083"	"1623.82160"	"-0.47"	"-0.00026"	"5/104"	"5"	"104"	"534657.935852051"	"HCD"	"MS2"	"36.72202"	"13.8"	"100.000"	"85.3292"	"29600"	"29600"	"29580"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.3"	""	"22.7"	""	"17.8"	""	"20.9"	""	"23.4"	"19.0"	""	"850"	"23"	"36.000"	"29.000"	"0.23035037842069"	"16"	"0.005119"	"0.05855"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGDVAYDEAK"	"[K].vVGDVAYDEAk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"541.97052"	"1623.89701"	"1623.89941"	"-1.48"	"-0.00080"	"12/90"	"12"	"90"	"1211843.26678467"	"HCD"	"MS2"	"31.19272"	"34.9"	"100.000"	"67.4532"	"22390"	"22390"	"22369"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.6"	""	"53.2"	""	"47.3"	""	"60.2"	""	"64.6"	"56.4"	""	"970"	"44"	"36.000"	"29.000"	"0.00199407614735693"	"21"	"0"	"0.000799"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGDVAYDEAK"	"[K].vVGDVAYDEAk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"812.45270"	"1623.89812"	"1623.89941"	"-0.79"	"-0.00064"	"13/90"	"13"	"90"	"426428.849853516"	"HCD"	"MS2"	"100"	"39.2"	"100.000"	"67.4555"	"22391"	"22391"	"22369"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.1"	""	"49.5"	""	"53.4"	""	"67.6"	"1.1"	"69.0"	"72.9"	""	"952"	"41"	"36.000"	"29.000"	"0.00364423984889758"	"20"	"0"	"0.0002672"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGDVAYDEAK"	"[K].vVGDVAYDEAk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"3"	"3"	"0.8478"	"0.0000"	"1"	"1"	"1"	"541.97095"	"1623.89829"	"1623.89941"	"-0.69"	"-0.00037"	"12/90"	"12"	"90"	"1341054.37438965"	"HCD"	"MS2"	"16.43322"	"37.3"	"100.000"	"67.3989"	"22383"	"22383"	"22363"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.3"	""	"47.7"	""	"52.0"	""	"57.0"	"1.3"	"70.1"	"64.7"	""	"954"	"46"	"36.000"	"29.000"	"0.00124887329492046"	"22"	"0"	"0.0004467"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGDVAYDEAK"	"[K].vVGDVAYDEAk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"812.45294"	"1623.89861"	"1623.89941"	"-0.49"	"-0.00040"	"6/90"	"6"	"90"	"132232.292602539"	"HCD"	"MS2"	"0"	"11.2"	"100.000"	"67.5924"	"22462"	"22462"	"22440"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.1"	""	"16.4"	""	"16.8"	""	"18.2"	""	"23.5"	"21.2"	""	"952"	"22"	"36.000"	"29.000"	"0.330831575172267"	"20"	"0.004942"	"0.05476"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGDVAYDEAK"	"[K].vVGDVAYDEAk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"812.45331"	"1623.89934"	"1623.89941"	"-0.04"	"-0.00003"	"8/90"	"8"	"90"	"399664.272827148"	"HCD"	"MS2"	"100"	"36.6"	"100.000"	"67.2836"	"22336"	"22336"	"22316"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.5"	""	"46.9"	""	"43.7"	""	"62.8"	"0.6"	"75.9"	"64.1"	""	"936"	"41"	"36.000"	"29.000"	"0.00383041520847082"	"19"	"0"	"0.0002462"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEQDEFEK"	"[K].lEEQDEFEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"542.28687"	"1624.84604"	"1624.84704"	"-0.61"	"-0.00033"	"9/86"	"9"	"86"	"814502.68560791"	"HCD"	"MS2"	"9.234796"	"26.4"	"100.000"	"67.0355"	"22220"	"22220"	"22195"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.7"	""	"26.6"	""	"31.8"	""	"55.1"	""	"51.8"	"53.1"	""	"941"	"18"	"36.000"	"29.000"	"0.764820689580603"	"26"	"0.005001"	"0.05655"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEQDEFEK"	"[K].lEEQDEFEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"2"	"2"	"0.6304"	"0.0000"	"1"	"1"	"1"	"812.92694"	"1624.84661"	"1624.84704"	"-0.27"	"-0.00022"	"8/86"	"8"	"86"	"447600.196838379"	"HCD"	"MS2"	"0"	"45.2"	"100.000"	"66.8590"	"22163"	"22163"	"22140"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.7"	""	"37.2"	""	"49.0"	""	"93.0"	"2.2"	"93.4"	"87.0"	""	"941"	"46"	"36.000"	"29.000"	"0.00119552765796095"	""	"0"	"0.0002099"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEQDEFEK"	"[K].lEEQDEFEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"2"	"2"	"0.5588"	"0.0000"	"1"	"1"	"1"	"812.92700"	"1624.84673"	"1624.84704"	"-0.19"	"-0.00016"	"6/86"	"6"	"86"	"366394.985168457"	"HCD"	"MS2"	"0"	"37.5"	"100.000"	"67.0286"	"22217"	"22217"	"22195"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.6"	""	"37.5"	""	"41.4"	""	"68.5"	""	"79.9"	"77.7"	""	"941"	"34"	"36.000"	"29.000"	"0.0203966868281332"	""	"0"	"0.00278"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLGPAPEDDDER"	"[R].aLLGPAPEDDDER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G074"	"KIF1-binding protein OS=Rattus norvegicus OX=10116 GN=Kbp PE=2 SV=1"	"Q4G074"	"KIF1-binding protein OS=Rattus norvegicus OX=10116 GN=Kbp PE=2 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"813.91174"	"1626.81621"	"1626.81725"	"-0.64"	"-0.00052"	"13/104"	"13"	"104"	"218703.94354248"	"HCD"	"MS2"	"26.55874"	"15.4"	"100.000"	"59.0281"	"19018"	"19018"	"18989"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.2"	""	"13.7"	""	"17.2"	""	"25.2"	""	"23.5"	"52.8"	""	"824"	"35"	"36.000"	"29.000"	"0.0121870113621924"	"25"	"0"	"0.0004879"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLGPAPEDDDER"	"[R].aLLGPAPEDDDER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G074"	"KIF1-binding protein OS=Rattus norvegicus OX=10116 GN=Kbp PE=2 SV=1"	"Q4G074"	"KIF1-binding protein OS=Rattus norvegicus OX=10116 GN=Kbp PE=2 SV=1"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"813.91211"	"1626.81694"	"1626.81725"	"-0.19"	"-0.00015"	"8/104"	"8"	"104"	"222375.546508789"	"HCD"	"MS2"	"21.14037"	"13.5"	"100.000"	"59.2787"	"19105"	"19105"	"19080"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.5"	""	"12.7"	""	"9.3"	""	"17.3"	""	"19.0"	"53.6"	""	"822"	"37"	"36.000"	"29.000"	"0.00816285011033879"	"21"	"0"	"0.0004652"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASHQEVLEAGK"	"[K].aSHQEVLEAGk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"542.97791"	"1626.91916"	"1626.92154"	"-1.46"	"-0.00079"	"7/106"	"7"	"106"	"13868394.664978"	"HCD"	"MS2"	"8.479082"	"287.7"	"100.000"	"34.4295"	"9002"	"9002"	"8983"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"428.7"	""	"299.1"	""	"425.1"	""	"486.4"	""	"610.2"	"479.4"	""	"868"	"44"	"36.000"	"29.000"	"0.00163113433461185"	"29"	"0"	"9.068E-06"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASHQEVLEAGK"	"[K].aSHQEVLEAGk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.6739"	"0.0000"	"1"	"1"	"1"	"542.97797"	"1626.91935"	"1626.92154"	"-1.35"	"-0.00073"	"7/106"	"7"	"106"	"14237623.6958008"	"HCD"	"MS2"	"8.586424"	"294.7"	"100.000"	"34.3801"	"8988"	"8988"	"8967"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"459.5"	""	"301.9"	""	"419.3"	""	"508.0"	""	"623.7"	"484.5"	""	"868"	"46"	"36.000"	"29.000"	"0.0012008526741086"	""	"0"	"5.524E-05"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEPVKPEEGR"	"[K].qEPVkPEEGR.[D]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"3"	"3"	"0.1250"	"0.0000"	"1"	"1"	"1"	"542.97888"	"1626.92209"	"1626.92154"	"0.34"	"0.00018"	"7/102"	"7"	"102"	"4525462.96899414"	"HCD"	"MS2"	"10.88823"	"219.9"	"100.000"	"29.0637"	"6837"	"6837"	"6816"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"295.6"	""	"212.8"	""	"239.9"	""	"340.4"	""	"514.5"	"489.1"	""	"873"	"8"	"36.000"	"29.000"	"7.24409685096495"	"20"	"0.002973"	"0.02859"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDYDEDASAMLR"	"[K].lDYDEDASAMLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"0"	"2"	"2"	"0.2941"	"0.0000"	"1"	"1"	"1"	"814.39514"	"1627.78301"	"1627.78350"	"-0.30"	"-0.00025"	"4/100"	"4"	"100"	"91004.4546508789"	"HCD"	"MS2"	"12.54074"	"6.2"	"100.000"	"87.6184"	"30496"	"30496"	"30481"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.6"	""	"6.2"	""	"8.6"	""	"7.7"	""	"13.7"	"11.5"	""	"573"	"17"	"34.000"	"27.000"	"0.537185926561316"	"25"	"0.00918"	"0.12"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPQMGDPASLEPR"	"[K].tPQMGDPASLEPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"0"	"2"	"2"	"0.2143"	"0.0000"	"1"	"1"	"1"	"814.41888"	"1627.83049"	"1627.83112"	"-0.39"	"-0.00031"	"7/136"	"7"	"136"	"211282.209594727"	"HCD"	"MS2"	"31.33102"	"17.2"	"100.000"	"64.9433"	"21383"	"21383"	"21358"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.1"	""	"19.1"	""	"17.5"	""	"30.9"	"1.8"	"30.1"	"36.3"	""	"839"	"14"	"36.000"	"29.000"	"1.85665822206122"	"24"	"0.006739"	"0.07615"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPQMGDPASLEPR"	"[K].tPQMGDPASLEPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"814.41895"	"1627.83061"	"1627.83112"	"-0.31"	"-0.00025"	"6/136"	"6"	"136"	"265483.423217773"	"HCD"	"MS2"	"0"	"14.6"	"100.000"	"64.6303"	"21260"	"21260"	"21231"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.7"	""	"21.0"	""	"19.9"	""	"18.8"	""	"32.5"	"25.5"	""	"831"	"13"	"36.000"	"29.000"	"2.09686769137646"	"16"	"0.005874"	"0.06688"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPQMGDPASLEPR"	"[K].tPQMGDPASLEPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"814.41937"	"1627.83147"	"1627.83112"	"0.21"	"0.00017"	"6/136"	"6"	"136"	"287158.044372559"	"HCD"	"MS2"	"11.3334"	"17.3"	"100.000"	"64.7564"	"21292"	"21292"	"21271"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.4"	""	"27.5"	""	"27.3"	""	"17.3"	""	"30.8"	"36.6"	""	"828"	"17"	"36.000"	"29.000"	"0.812831154610123"	"19"	"0.003111"	"0.03167"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPEK"	"[K].dFYELEPEk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"543.29181"	"1627.86087"	"1627.86196"	"-0.67"	"-0.00036"	"9/78"	"9"	"78"	"1013755.75415039"	"HCD"	"MS2"	"5.578568"	"31.8"	"100.000"	"85.8975"	"29820"	"29820"	"29800"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.8"	""	"37.7"	""	"45.4"	""	"56.8"	""	"56.7"	"58.2"	""	"960"	"32"	"36.000"	"29.000"	"0.0331315105843316"	"27"	"0.001635"	"0.01979"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPEK"	"[K].dFYELEPEk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"814.43427"	"1627.86125"	"1627.86196"	"-0.43"	"-0.00035"	"6/78"	"6"	"78"	"495876.251281738"	"HCD"	"MS2"	"0"	"42.7"	"100.000"	"85.9622"	"29846"	"29846"	"29828"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.4"	""	"39.7"	""	"61.3"	""	"72.8"	""	"87.6"	"82.8"	""	"953"	"40"	"36.000"	"29.000"	"0.00494382290137283"	"17"	"0"	"0.0009672"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPEK"	"[K].dFYELEPEk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"814.43433"	"1627.86138"	"1627.86196"	"-0.36"	"-0.00029"	"6/78"	"6"	"78"	"418056.481018066"	"HCD"	"MS2"	"0"	"33.1"	"100.000"	"86.1335"	"29915"	"29915"	"29900"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.3"	""	"33.4"	""	"37.4"	""	"52.8"	""	"68.8"	"67.4"	""	"953"	"38"	"36.000"	"29.000"	"0.00835724059127599"	"17"	"0"	"0.0009755"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPEK"	"[K].dFYELEPEk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"543.29211"	"1627.86179"	"1627.86196"	"-0.10"	"-0.00006"	"9/78"	"9"	"78"	"734943.270385742"	"HCD"	"MS2"	"4.5448"	"23.1"	"100.000"	"86.1891"	"29935"	"29935"	"29922"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.2"	""	"24.8"	""	"28.0"	""	"34.4"	""	"52.0"	"46.9"	""	"967"	"35"	"36.000"	"29.000"	"0.0163831149493304"	"29"	"0.001211"	"0.01455"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPEK"	"[K].dFYELEPEk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"543.29211"	"1627.86179"	"1627.86196"	"-0.10"	"-0.00006"	"9/78"	"9"	"78"	"1016663.47918701"	"HCD"	"MS2"	"10.73513"	"30.8"	"100.000"	"85.9116"	"29826"	"29826"	"29807"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.4"	""	"29.9"	""	"38.3"	""	"54.5"	""	"61.8"	"62.6"	""	"967"	"28"	"36.000"	"29.000"	"0.0817328190449519"	"24"	"0.0023"	"0.02399"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPEK"	"[K].dFYELEPEk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.5938"	"0.0000"	"1"	"1"	"1"	"543.29224"	"1627.86216"	"1627.86196"	"0.12"	"0.00007"	"9/78"	"9"	"78"	"789318.994262695"	"HCD"	"MS2"	"4.719155"	"23.0"	"100.000"	"86.2121"	"29947"	"29947"	"29927"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.9"	""	"26.5"	""	"27.9"	""	"42.0"	"0.7"	"45.7"	"45.9"	""	"964"	"32"	"36.000"	"29.000"	"0.0332695585450997"	"27"	"0.001374"	"0.01682"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPEK"	"[K].dFYELEPEk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"814.43488"	"1627.86247"	"1627.86196"	"0.32"	"0.00026"	"6/78"	"6"	"78"	"160521.492126465"	"HCD"	"MS2"	"0"	"13.9"	"100.000"	"86.2445"	"29957"	"29957"	"29944"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.3"	""	"15.0"	""	"13.7"	""	"25.7"	""	"29.9"	"24.8"	""	"961"	"39"	"36.000"	"29.000"	"0.00627615111747349"	"21"	"0.0006732"	"0.009298"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPEK"	"[K].dFYELEPEk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"814.43561"	"1627.86394"	"1627.86196"	"1.22"	"0.00099"	"6/78"	"6"	"78"	"190533.690979004"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"85.8515"	"29802"	"29802"	"29788"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.0"	""	"16.7"	""	"18.8"	""	"26.4"	""	"35.4"	"24.9"	""	"951"	"39"	"36.000"	"29.000"	"0.00654863102459071"	"18"	"0.0003538"	"0.006793"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQELMNVK"	"[R].eYQELmNVk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"2"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG05; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"543.29700"	"1627.87644"	"1627.87656"	"-0.08"	"-0.00004"	"10/82"	"10"	"82"	"1387086.90826416"	"HCD"	"MS2"	"11.5952"	"34.5"	"100.000"	"62.6781"	"20450"	"20450"	"20427"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.8"	""	"33.8"	""	"43.4"	""	"82.2"	"1.6"	"50.8"	"69.0"	""	"946"	"33"	"36.000"	"29.000"	"0.0220729886888658"	"16"	"0.0002479"	"0.005279"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQELMNVK"	"[R].eYQELmNVk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"2"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG05; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"814.44208"	"1627.87688"	"1627.87656"	"0.19"	"0.00016"	"8/82"	"8"	"82"	"376332.316040039"	"HCD"	"MS2"	"48.18455"	"28.2"	"100.000"	"62.5198"	"20402"	"20402"	"20375"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.2"	""	"29.0"	""	"35.4"	""	"64.1"	""	"45.4"	"50.2"	""	"947"	"42"	"36.000"	"29.000"	"0.00278817470810871"	"17"	"0.002973"	"0.02891"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQELMNVK"	"[R].eYQELmNVk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"2"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG05; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.9714"	"0.0000"	"1"	"1"	"1"	"814.44257"	"1627.87786"	"1627.87656"	"0.79"	"0.00065"	"12/82"	"12"	"82"	"211053.819030762"	"HCD"	"MS2"	"0"	"17.5"	"100.000"	"62.8355"	"20530"	"20530"	"20510"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.9"	""	"19.3"	""	"19.2"	""	"38.0"	""	"34.0"	"33.7"	""	"945"	"35"	"36.000"	"29.000"	"0.0143681817463204"	"16"	"0.001211"	"0.01515"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQELMNVK"	"[R].eYQELmNVk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"2"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG05; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"814.44324"	"1627.87920"	"1627.87656"	"1.62"	"0.00132"	"8/82"	"8"	"82"	"387207.137756348"	"HCD"	"MS2"	"43.27896"	"31.2"	"100.000"	"62.6435"	"20436"	"20436"	"20411"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.5"	""	"35.3"	""	"37.2"	""	"71.3"	"0.6"	"50.0"	"59.8"	""	"955"	"42"	"36.000"	"29.000"	"0.00324319734574706"	"15"	"0.0008629"	"0.009686"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMTGYGMPR"	"[RK].gASQAGMTGYGmPR.[Q]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"814.88885"	"1628.77043"	"1628.77223"	"-1.10"	"-0.00090"	"6/134"	"6"	"134"	"226021.17364502"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"36.3301"	"9780"	"9780"	"9759"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.3"	""	"12.5"	""	"13.6"	""	"25.3"	""	"36.0"	"20.0"	""	"502"	"19"	"33.000"	"27.000"	"0.343299935224558"	"14"	"0"	"0.0004497"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMTGYGMPR"	"[RK].gASQAGMTGYGmPR.[Q]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"814.88995"	"1628.77263"	"1628.77223"	"0.25"	"0.00020"	"11/134"	"11"	"134"	"257172.056335449"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"36.6748"	"9920"	"9920"	"9891"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.9"	""	"10.9"	""	"13.1"	""	"22.9"	"1.6"	"39.3"	"30.0"	""	"521"	"55"	"34.000"	"27.000"	"8.35233159033675E-05"	"16"	"0"	"2.231E-06"	"1.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMTGYGMPR"	"[RK].gASQAGmTGYGMPR.[Q]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"814.89014"	"1628.77300"	"1628.77223"	"0.47"	"0.00038"	"9/134"	"9"	"134"	"125549.121032715"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"38.8670"	"10799"	"10799"	"10773"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.7"	""	"5.4"	""	"6.5"	""	"9.2"	""	"22.3"	"13.9"	""	"526"	"37"	"34.000"	"27.000"	"0.00510452985806901"	"17"	"0"	"0.0003272"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMTGYGMPR"	"[RK].gASQAGmTGYGMPR.[Q]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"814.89026"	"1628.77324"	"1628.77223"	"0.62"	"0.00051"	"18/134"	"18"	"134"	"253353.338684082"	"HCD"	"MS2"	"0"	"13.8"	"100.000"	"38.3463"	"10596"	"10596"	"10568"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.6"	""	"14.6"	""	"12.7"	""	"27.7"	""	"34.4"	"28.6"	""	"524"	"64"	"34.000"	"27.000"	"9.84693999235723E-06"	"17"	"0"	"3.531E-05"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMTGYGMPR"	"[RK].gASQAGMTGYGmPR.[Q]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"814.89075"	"1628.77422"	"1628.77223"	"1.22"	"0.00100"	"11/134"	"11"	"134"	"371731.801696777"	"HCD"	"MS2"	"0"	"18.8"	"100.000"	"36.6206"	"9892"	"9892"	"9864"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.0"	""	"16.4"	""	"17.0"	""	"35.7"	""	"54.7"	"38.2"	""	"539"	"66"	"34.000"	"27.000"	"7.02358381724702E-06"	"17"	"0"	"5.868E-06"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMTGYGMPR"	"[RK].gASQAGmTGYGMPR.[Q]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"814.89099"	"1628.77471"	"1628.77223"	"1.52"	"0.00124"	"13/134"	"13"	"134"	"277901.593322754"	"HCD"	"MS2"	"100"	"15.2"	"100.000"	"38.5587"	"10674"	"10674"	"10647"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.1"	""	"14.0"	""	"12.1"	""	"30.1"	""	"40.3"	"34.6"	""	"545"	"23"	"34.000"	"27.000"	"0.13438986157772"	"14"	"0"	"0.0002891"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTAPTSSPSITAPR"	"[K].nTAPTSSPSITAPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.9778"	"0.0000"	"1"	"1"	"1"	"814.94342"	"1628.87956"	"1628.88051"	"-0.58"	"-0.00048"	"10/148"	"10"	"148"	"625670.611938477"	"HCD"	"MS2"	"11.92242"	"31.9"	"100.000"	"41.2319"	"11761"	"11761"	"11743"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.4"	""	"41.0"	""	"43.4"	""	"44.2"	""	"54.9"	"79.7"	""	"975"	"45"	"36.000"	"29.000"	"0.00171780799633213"	"16"	"0"	"0.001099"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTAPTSSPSITAPR"	"[K].nTAPTSSPSITAPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"814.94373"	"1628.88017"	"1628.88051"	"-0.21"	"-0.00017"	"10/148"	"10"	"148"	"590674.109924316"	"HCD"	"MS2"	"0"	"25.6"	"100.000"	"40.9948"	"11674"	"11674"	"11660"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.0"	""	"34.8"	""	"42.0"	""	"34.0"	""	"45.0"	"57.9"	""	"977"	"53"	"36.000"	"29.000"	"0.000239256953261486"	"24"	"0"	"0.0004617"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RIQLVEEELDR"	"[R].rIQLVEEELDR.[A]"	"N-Term(TMT6plex)"	"4"	"4"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2;Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"1"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"543.64325"	"1628.91520"	"1628.91690"	"-1.05"	"-0.00057"	"8/108"	"8"	"108"	"1519268.74700928"	"HCD"	"MS2"	"8.463631"	"26.8"	"100.000"	"68.2335"	"22722"	"22722"	"22703"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.3"	""	"27.9"	""	"35.3"	""	"47.3"	""	"57.5"	"56.1"	""	"859"	"29"	"36.000"	"29.000"	"0.0524762954040812"	"17"	"0"	"0.0011"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RIQLVEEELDR"	"[R].rIQLVEEELDR.[A]"	"N-Term(TMT6plex)"	"4"	"4"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2;Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"1"	"3"	"3"	"0.8909"	"0.0000"	"1"	"1"	"1"	"543.64325"	"1628.91520"	"1628.91690"	"-1.05"	"-0.00057"	"9/108"	"9"	"108"	"3206978.29162598"	"HCD"	"MS2"	"15.3333"	"44.3"	"100.000"	"68.2834"	"22728"	"22728"	"22710"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.3"	""	"47.4"	""	"47.2"	""	"87.8"	"0.5"	"80.8"	"94.6"	""	"859"	"55"	"36.000"	"29.000"	"0.000142220816676773"	"22"	"0"	"1.049E-05"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RIQLVEEELDR"	"[R].rIQLVEEELDR.[A]"	"N-Term(TMT6plex)"	"4"	"4"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2;Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"1"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"543.64331"	"1628.91538"	"1628.91690"	"-0.93"	"-0.00051"	"8/108"	"8"	"108"	"4513621.43719482"	"HCD"	"MS2"	"41.32047"	"68.3"	"100.000"	"67.9337"	"22600"	"22600"	"22578"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"83.7"	""	"74.3"	""	"66.8"	""	"133.8"	"1.3"	"144.1"	"144.8"	""	"857"	"43"	"36.000"	"29.000"	"0.00194513982734612"	"19"	"0"	"3.17E-05"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAAVEELNPK"	"[K].eAAAVEELNPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"2"	"2"	"0.9434"	"0.0000"	"1"	"1"	"1"	"814.96545"	"1628.92363"	"1628.92596"	"-1.43"	"-0.00116"	"9/96"	"9"	"96"	"220268.886474609"	"HCD"	"MS2"	"27.54931"	"19.8"	"100.000"	"66.4073"	"21979"	"21979"	"21949"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.1"	""	"18.2"	""	"25.2"	""	"36.0"	""	"35.1"	"46.7"	""	"851"	"53"	"36.000"	"29.000"	"0.000198106882794019"	"19"	"0"	"5.041E-05"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAAVEELNPK"	"[K].eAAAVEELNPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"3"	"3"	"0.9250"	"0.0000"	"1"	"1"	"1"	"543.64630"	"1628.92435"	"1628.92596"	"-0.99"	"-0.00054"	"7/96"	"7"	"96"	"1562333.20098877"	"HCD"	"MS2"	"45.78223"	"44.3"	"100.000"	"66.3867"	"21970"	"21970"	"21949"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.4"	""	"51.9"	""	"48.8"	""	"86.5"	"0.4"	"83.4"	"91.4"	""	"834"	"40"	"36.000"	"29.000"	"0.00383827471421072"	"18"	"0"	"0.0003555"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAAVEELNPK"	"[K].eAAAVEELNPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"543.64673"	"1628.92563"	"1628.92596"	"-0.20"	"-0.00011"	"7/96"	"7"	"96"	"1730538.96356201"	"HCD"	"MS2"	"56.24108"	"54.2"	"100.000"	"66.4111"	"21965"	"21965"	"21941"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.4"	""	"58.1"	""	"57.5"	""	"131.1"	"1.7"	"88.2"	"101.7"	""	"845"	"24"	"36.000"	"29.000"	"0.183580569712489"	"14"	"0"	"0.0006166"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAAVEELNPK"	"[K].eAAAVEELNPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"814.96655"	"1628.92583"	"1628.92596"	"-0.08"	"-0.00006"	"7/96"	"7"	"96"	"164717.843811035"	"HCD"	"MS2"	"23.74209"	"15.3"	"100.000"	"66.4987"	"22001"	"22001"	"21973"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.1"	""	"18.4"	""	"14.7"	""	"28.3"	""	"33.4"	"31.4"	""	"846"	"36"	"36.000"	"29.000"	"0.0104073549655445"	"24"	"0"	"0.00357"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RIQLVEEELDR"	"[R].rIQLVEEELDR.[A]"	"N-Term(TMT6plex)"	"4"	"4"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2;Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"1"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"543.65320"	"1628.94504"	"1628.91690"	"17.28"	"0.00938"	"9/108"	"9"	"108"	"1913784.33111572"	"HCD"	"MS2"	"27.98996"	"34.8"	"100.000"	"67.9929"	"22610"	"22610"	"22585"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.7"	""	"41.7"	""	"37.7"	""	"69.3"	""	"71.4"	"75.9"	""	"804"	"27"	"36.000"	"29.000"	"0.0783837529102734"	"16"	"0"	"0.001879"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGGDEIPYSPFR"	"[K].yGGDEIPYSPFR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"815.40881"	"1629.81035"	"1629.81104"	"-0.42"	"-0.00034"	"6/98"	"6"	"98"	"109454.456787109"	"HCD"	"MS2"	"13.5743"	"4.5"	"100.000"	"89.2400"	"31122"	"31122"	"31108"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.0"	""	"6.1"	""	"2.9"	""	"10.1"	""	"8.5"	"8.2"	""	"681"	"7"	"35.000"	"28.000"	"6.73158162458089"	"18"	"0.007018"	"0.08158"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGGDEIPYSPFR"	"[K].yGGDEIPYSPFR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"815.40906"	"1629.81084"	"1629.81104"	"-0.12"	"-0.00010"	"4/98"	"4"	"98"	"113935.138244629"	"HCD"	"MS2"	"27.37045"	"6.5"	"100.000"	"88.9899"	"31027"	"31027"	"31013"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.6"	""	"8.3"	""	"8.0"	""	"13.6"	""	"12.0"	"12.6"	""	"694"	"10"	"35.000"	"28.000"	"3.72674326082412"	"17"	"0.004069"	"0.04382"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGGDEIPYSPFR"	"[K].yGGDEIPYSPFR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"815.40912"	"1629.81096"	"1629.81104"	"-0.05"	"-0.00004"	"7/98"	"7"	"98"	"102368.254211426"	"HCD"	"MS2"	"25.46267"	"4.0"	"100.000"	"89.2663"	"31134"	"31134"	"31123"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.0"	""	"4.8"	""	"3.3"	""	"9.3"	""	"6.3"	"8.9"	""	"694"	"9"	"35.000"	"28.000"	"3.91137517292902"	"20"	"0.005183"	"0.05895"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTPDEPWAFPAR"	"[K].dTPDEPWAFPAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"544.27283"	"1630.80393"	"1630.80629"	"-1.45"	"-0.00079"	"10/96"	"10"	"96"	"275369.869567871"	"HCD"	"MS2"	"5.720817"	"7.1"	"100.000"	"85.4668"	"29654"	"29654"	"29633"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.5"	""	"10.2"	""	"9.5"	""	"15.2"	""	"11.0"	"10.4"	""	"647"	"27"	"35.000"	"28.000"	"0.064844670085263"	"17"	"0.005874"	"0.06648"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTPDEPWAFPAR"	"[K].dTPDEPWAFPAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"815.90582"	"1630.80437"	"1630.80629"	"-1.18"	"-0.00096"	"12/96"	"12"	"96"	"197880.14074707"	"HCD"	"MS2"	"17.2639"	"10.2"	"100.000"	"85.1161"	"29520"	"29520"	"29495"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.9"	""	"8.2"	""	"12.0"	""	"22.3"	""	"22.3"	"19.9"	""	"650"	"29"	"35.000"	"28.000"	"0.0427448070462478"	"14"	"0.001812"	"0.02065"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTPDEPWAFPAR"	"[K].dTPDEPWAFPAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"815.90656"	"1630.80583"	"1630.80629"	"-0.28"	"-0.00023"	"10/96"	"10"	"96"	"492517.895568848"	"HCD"	"MS2"	"0"	"24.0"	"100.000"	"85.3152"	"29594"	"29594"	"29580"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.6"	""	"21.0"	""	"23.5"	""	"39.2"	"1.3"	"67.5"	"51.6"	""	"665"	"39"	"35.000"	"28.000"	"0.0046215924987844"	""	"0"	"0.0002355"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHLYGTLDPNTR"	"[K].dHLYGTLDPNTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.9773"	"0.0000"	"1"	"1"	"1"	"544.28400"	"1630.83744"	"1630.83865"	"-0.74"	"-0.00040"	"8/112"	"8"	"112"	"3875209.52612305"	"HCD"	"MS2"	"0"	"42.8"	"100.000"	"48.2452"	"14610"	"14610"	"14590"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.0"	""	"53.4"	""	"58.5"	""	"68.4"	"1.1"	"87.5"	"79.6"	""	"899"	"44"	"36.000"	"29.000"	"0.00188681663303958"	"16"	"0"	"1.993E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHLYGTLDPNTR"	"[K].dHLYGTLDPNTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"544.28424"	"1630.83817"	"1630.83865"	"-0.29"	"-0.00016"	"16/112"	"16"	"112"	"3232013.99578857"	"HCD"	"MS2"	"13.42686"	"36.4"	"100.000"	"47.7357"	"14415"	"14415"	"14397"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.5"	""	"46.5"	""	"49.0"	""	"59.2"	"2.9"	"71.0"	"66.7"	""	"895"	"33"	"36.000"	"29.000"	"0.023866736573071"	"15"	"0"	"1.906E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGSPEVMLTPER"	"[K].vSGSPEVMLTPER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P84850"	"D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=3 SV=1"	"P84850"	"D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"815.93579"	"1630.86431"	"1630.86717"	"-1.76"	"-0.00143"	"7/116"	"7"	"116"	"78109.3295898438"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"70.1650"	"23510"	"23510"	"23484"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.4"	""	"6.2"	""	"5.3"	""	"6.2"	""	"10.9"	"14.9"	""	"1046"	"9"	"37.000"	"30.000"	"6.34602368793183"	"13"	"0.009981"	"0.1281"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9792"	"0.0000"	"1"	"1"	"1"	"815.93634"	"1630.86540"	"1630.86717"	"-1.08"	"-0.00088"	"15/114"	"15"	"114"	"320044.363220215"	"HCD"	"MS2"	"0"	"13.3"	"100.000"	"77.5822"	"26515"	"26515"	"26499"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.9"	""	"18.0"	""	"13.8"	""	"30.7"	"1.7"	"25.0"	"23.0"	""	"1040"	"48"	"37.000"	"30.000"	"0.000907827519518662"	"17"	"0.001546"	"0.01856"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"815.93646"	"1630.86565"	"1630.86717"	"-0.94"	"-0.00076"	"12/114"	"12"	"114"	"226255.45513916"	"HCD"	"MS2"	"16.27794"	"9.0"	"100.000"	"76.6168"	"26115"	"26115"	"26088"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.2"	""	"8.5"	""	"12.2"	""	"23.3"	""	"15.0"	"16.2"	""	"1037"	"38"	"37.000"	"30.000"	"0.00870459883396547"	"21"	"0"	"0.001911"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"815.93646"	"1630.86565"	"1630.86717"	"-0.94"	"-0.00076"	"16/114"	"16"	"114"	"351652.043762207"	"HCD"	"MS2"	"0"	"14.1"	"100.000"	"76.5579"	"26099"	"26099"	"26082"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.1"	""	"13.8"	""	"21.5"	""	"37.0"	""	"26.4"	"20.7"	""	"1037"	"43"	"37.000"	"30.000"	"0.00286252152267073"	"22"	"0.0003538"	"0.006273"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"815.93652"	"1630.86577"	"1630.86717"	"-0.86"	"-0.00070"	"15/114"	"15"	"114"	"292141.482116699"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"76.9265"	"26239"	"26239"	"26219"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.6"	""	"12.8"	""	"11.6"	""	"32.0"	""	"21.9"	"20.2"	""	"1036"	"46"	"37.000"	"30.000"	"0.00130115717152196"	"23"	"0.001036"	"0.01347"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"815.93665"	"1630.86601"	"1630.86717"	"-0.71"	"-0.00058"	"15/114"	"15"	"114"	"277830.833068848"	"HCD"	"MS2"	"0"	"10.0"	"100.000"	"77.2986"	"26400"	"26400"	"26380"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.7"	""	"8.5"	""	"14.8"	""	"23.9"	""	"17.0"	"20.9"	""	"1031"	"57"	"37.000"	"30.000"	"0.000108950360003579"	"29"	"0.0006732"	"0.00924"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"815.93671"	"1630.86614"	"1630.86717"	"-0.64"	"-0.00052"	"15/114"	"15"	"114"	"246850.937194824"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"77.3690"	"26418"	"26418"	"26400"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.8"	""	"9.4"	""	"9.7"	""	"24.7"	""	"22.3"	"16.4"	""	"1039"	"43"	"37.000"	"30.000"	"0.00277067478205819"	"18"	"0.0003538"	"0.006197"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"815.93707"	"1630.86687"	"1630.86717"	"-0.19"	"-0.00015"	"14/114"	"14"	"114"	"240001.180603027"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"76.8743"	"26227"	"26227"	"26211"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.1"	""	"9.0"	""	"10.7"	""	"21.1"	""	"17.5"	"16.7"	""	"1041"	"60"	"37.000"	"30.000"	"5.42526221999215E-05"	"25"	"0.0002479"	"0.005028"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.7209"	"0.0000"	"1"	"1"	"1"	"544.29401"	"1630.86747"	"1630.86717"	"0.18"	"0.00010"	"8/114"	"8"	"114"	"728375.169799805"	"HCD"	"MS2"	"14.91107"	"11.4"	"100.000"	"77.4483"	"26461"	"26461"	"26439"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.9"	""	"12.7"	""	"13.8"	""	"24.1"	""	"19.7"	"24.8"	""	"1039"	"43"	"37.000"	"30.000"	"0.00250949047659662"	"27"	"0"	"0.0004004"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9153"	"0.0000"	"1"	"1"	"1"	"815.93762"	"1630.86797"	"1630.86717"	"0.49"	"0.00040"	"16/114"	"16"	"114"	"320587.632019043"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"77.6714"	"26542"	"26542"	"26525"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.4"	""	"15.4"	""	"16.7"	""	"31.3"	""	"25.3"	"30.1"	""	"1066"	"59"	"37.000"	"30.000"	"7.27322811801897E-05"	"21"	"0.0006732"	"0.008206"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGSPEVMLTPER"	"[K].vSGSPEVMLTPER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P84850"	"D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=3 SV=1"	"P84850"	"D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"815.93787"	"1630.86846"	"1630.86717"	"0.79"	"0.00064"	"4/116"	"4"	"116"	"100824.397766113"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"70.3073"	"23554"	"23554"	"23525"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.1"	""	"9.0"	""	"8.5"	""	"12.5"	""	"8.8"	"11.5"	""	"1066"	"11"	"37.000"	"30.000"	"4.58909669914392"	"13"	"0.005874"	"0.06707"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGFSDTGAYWR"	"[R].qDGFSDTGAYWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"816.38409"	"1631.76091"	"1631.76515"	"-2.60"	"-0.00212"	"9/120"	"9"	"120"	"358378.640136719"	"HCD"	"MS2"	"15.36554"	"24.8"	"100.000"	"73.8787"	"25021"	"25021"	"25000"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.5"	""	"27.1"	""	"27.1"	""	"44.5"	""	"56.8"	"55.6"	""	"390"	"36"	"32.000"	"25.000"	"0.00471014862716763"	"15"	"0"	"0.0008743"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGFSDTGAYWR"	"[R].qDGFSDTGAYWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"816.38470"	"1631.76213"	"1631.76515"	"-1.85"	"-0.00151"	"7/120"	"7"	"120"	"273072.370544434"	"HCD"	"MS2"	"0"	"20.7"	"100.000"	"74.0275"	"25069"	"25069"	"25040"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.8"	""	"22.1"	""	"21.2"	""	"42.5"	"0.6"	"42.1"	"44.7"	""	"400"	"22"	"33.000"	"26.000"	"0.121627000255744"	"14"	"0.0005778"	"0.008095"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGFSDTGAYWR"	"[R].qDGFSDTGAYWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"544.59290"	"1631.76413"	"1631.76515"	"-0.62"	"-0.00034"	"12/120"	"12"	"120"	"1136507.45343018"	"HCD"	"MS2"	"24.5959"	"33.8"	"100.000"	"74.0309"	"25083"	"25083"	"25060"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.9"	""	"38.3"	""	"46.0"	""	"52.9"	""	"70.8"	"77.3"	""	"418"	"24"	"33.000"	"26.000"	"0.0920759664728696"	"14"	"0"	"0.001352"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGFSDTGAYWR"	"[R].qDGFSDTGAYWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"816.38586"	"1631.76445"	"1631.76515"	"-0.43"	"-0.00035"	"10/120"	"10"	"120"	"1985847.86706543"	"HCD"	"MS2"	"9.788714"	"105.8"	"100.000"	"74.3161"	"25186"	"25186"	"25173"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"115.5"	""	"123.4"	""	"112.3"	""	"176.0"	"0.6"	"215.3"	"262.5"	""	"420"	"58"	"33.000"	"26.000"	"3.477116923286E-05"	"18"	"0"	"3.783E-07"	"1.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGFSDTGAYWR"	"[R].qDGFSDTGAYWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.9592"	"0.0000"	"1"	"1"	"1"	"816.38593"	"1631.76457"	"1631.76515"	"-0.35"	"-0.00029"	"11/120"	"11"	"120"	"2182565.42468262"	"HCD"	"MS2"	"7.493277"	"119.3"	"100.000"	"74.1649"	"25138"	"25138"	"25121"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"132.8"	""	"131.0"	""	"124.8"	""	"181.0"	"1.9"	"276.2"	"288.1"	""	"420"	"49"	"33.000"	"26.000"	"0.00027619721476037"	"18"	"0"	"1.863E-06"	"1.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGFSDTGAYWR"	"[R].qDGFSDTGAYWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"544.59314"	"1631.76487"	"1631.76515"	"-0.17"	"-0.00010"	"12/120"	"12"	"120"	"350261.145385742"	"HCD"	"MS2"	"53.17813"	"13.6"	"100.000"	"74.3492"	"25213"	"25213"	"25185"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.9"	""	"16.7"	""	"19.0"	""	"19.4"	"1.1"	"27.5"	"32.3"	""	"423"	"21"	"33.000"	"26.000"	"0.150075697924257"	"14"	"0.0023"	"0.02342"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGFSDTGAYWR"	"[R].qDGFSDTGAYWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"544.59332"	"1631.76542"	"1631.76515"	"0.16"	"0.00009"	"12/120"	"12"	"120"	"397014.818237305"	"HCD"	"MS2"	"41.77143"	"16.0"	"100.000"	"74.4543"	"25242"	"25242"	"25217"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.3"	""	"19.1"	""	"21.0"	""	"26.1"	""	"34.7"	"39.2"	""	"424"	"23"	"33.000"	"26.000"	"0.0996175510243057"	"14"	"0"	"0.002783"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGFSDTGAYWR"	"[R].qDGFSDTGAYWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"544.59338"	"1631.76560"	"1631.76515"	"0.27"	"0.00015"	"12/120"	"12"	"120"	"753433.223999023"	"HCD"	"MS2"	"56.79879"	"24.0"	"100.000"	"74.1222"	"25107"	"25107"	"25082"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.0"	""	"34.9"	""	"23.8"	""	"37.6"	""	"49.7"	"59.0"	""	"422"	"23"	"33.000"	"26.000"	"0.106729003682657"	"15"	"0"	"0.0007014"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVEEYVYEMR"	"[K].nAVEEYVYEMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"544.60248"	"1631.79288"	"1631.79367"	"-0.49"	"-0.00026"	"13/110"	"13"	"110"	"488340.707946777"	"HCD"	"MS2"	"13.97137"	"7.2"	"100.000"	"88.5424"	"30856"	"30856"	"30845"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.1"	""	"9.1"	""	"11.0"	""	"10.2"	""	"15.8"	"14.0"	""	"576"	"49"	"34.000"	"27.000"	"0.000329148960419454"	"16"	"0"	"0.0002023"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVEEYVYEMR"	"[K].nAVEEYVYEMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"816.40100"	"1631.79473"	"1631.79367"	"0.64"	"0.00053"	"7/110"	"7"	"110"	"174027.157958984"	"HCD"	"MS2"	"4.398428"	"10.9"	"100.000"	"88.6463"	"30891"	"30891"	"30884"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.3"	""	"14.7"	""	"17.2"	""	"9.7"	""	"23.5"	"20.2"	""	"584"	"51"	"34.000"	"27.000"	"0.000229288805306141"	"16"	"0"	"0.0002811"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVEEYVYEMR"	"[K].nAVEEYVYEMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.9821"	"0.0000"	"1"	"1"	"1"	"816.40106"	"1631.79485"	"1631.79367"	"0.72"	"0.00059"	"7/110"	"7"	"110"	"133940.821594238"	"HCD"	"MS2"	"18.83641"	"9.5"	"100.000"	"88.3674"	"30786"	"30786"	"30773"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.3"	""	"11.0"	""	"13.4"	""	"10.6"	""	"21.2"	"19.8"	""	"581"	"56"	"34.000"	"27.000"	"6.920638058487E-05"	"17"	"0"	"0.0001102"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVEEYVYEMR"	"[K].nAVEEYVYEMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"816.40118"	"1631.79509"	"1631.79367"	"0.87"	"0.00071"	"6/110"	"6"	"110"	"121037.08380127"	"HCD"	"MS2"	"28.72227"	"8.3"	"100.000"	"88.3526"	"30784"	"30784"	"30769"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.0"	""	"9.5"	""	"10.2"	""	"15.9"	""	"16.2"	"15.2"	""	"590"	"26"	"34.000"	"27.000"	"0.0729158622779758"	"14"	"0"	"0.001308"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVEEYVYEMR"	"[K].nAVEEYVYEMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"816.40137"	"1631.79546"	"1631.79367"	"1.09"	"0.00089"	"14/110"	"14"	"110"	"221126.207702637"	"HCD"	"MS2"	"5.970009"	"12.8"	"100.000"	"88.6236"	"30888"	"30888"	"30877"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.6"	""	"17.4"	""	"17.9"	""	"15.0"	""	"31.9"	"21.7"	""	"588"	"51"	"34.000"	"27.000"	"0.000219961833150279"	"16"	"0"	"7.402E-05"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILHECDLQTER"	"[R].iLHEcDLQTER.[L]"	"N-Term(TMT6plex); C5(Methylthio)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.9574"	"0.0000"	"1"	"1"	"1"	"544.60724"	"1631.80716"	"1631.80828"	"-0.68"	"-0.00037"	"9/98"	"9"	"98"	"1829967.03387451"	"HCD"	"MS2"	"15.12534"	"21.9"	"100.000"	"70.4460"	"23610"	"23610"	"23589"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.7"	""	"28.2"	""	"31.4"	""	"37.6"	""	"43.7"	"41.6"	""	"672"	"47"	"35.000"	"28.000"	"0.000643189990807085"	"18"	"0"	"6.487E-05"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILHECDLQTER"	"[R].iLHEcDLQTER.[L]"	"N-Term(TMT6plex); C5(Methylthio)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.9400"	"0.0000"	"1"	"1"	"1"	"544.60736"	"1631.80753"	"1631.80828"	"-0.46"	"-0.00025"	"9/98"	"9"	"98"	"1772077.19030762"	"HCD"	"MS2"	"16.07774"	"22.3"	"100.000"	"70.3059"	"23567"	"23567"	"23544"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.9"	""	"26.8"	""	"30.9"	""	"40.5"	""	"47.0"	"40.3"	""	"674"	"50"	"35.000"	"28.000"	"0.000344056606009489"	"18"	"0"	"0.0001401"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imnVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation); N3(Deamidated)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.6765"	"0.0000"	"1"	"1"	"1"	"544.62836"	"1631.87052"	"1631.85119"	"11.84"	"0.00644"	"5/114"	"5"	"114"	"403035.664245605"	"HCD"	"MS2"	"44.00784"	"8.1"	"100.000"	"77.5767"	"26503"	"26503"	"26477"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.7"	""	"8.9"	""	"9.3"	""	"13.5"	""	"19.4"	"16.5"	""	"1024"	"34"	"37.000"	"30.000"	"0.0182502980314237"	"25"	"0.001374"	"0.01663"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADIVENQVMDNR"	"[R].aDIVENQVMDNR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"816.91345"	"1632.81963"	"1632.82129"	"-1.02"	"-0.00083"	"6/116"	"6"	"116"	"352456.012023926"	"HCD"	"MS2"	"0"	"20.1"	"100.000"	"67.1312"	"22274"	"22274"	"22252"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.3"	""	"19.6"	""	"22.7"	""	"21.6"	""	"43.7"	"38.9"	""	"770"	"35"	"35.000"	"28.000"	"0.0117885592197091"	"22"	"0"	"0.000497"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADIVENQVMDNR"	"[R].aDIVENQVMDNR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"544.94495"	"1632.82029"	"1632.82129"	"-0.61"	"-0.00033"	"12/116"	"12"	"116"	"1342014.37213135"	"HCD"	"MS2"	"6.94701"	"18.1"	"100.000"	"67.2233"	"22312"	"22312"	"22284"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.2"	""	"25.8"	""	"24.4"	""	"21.7"	"0.7"	"35.4"	"33.8"	""	"790"	"44"	"35.000"	"28.000"	"0.00157614836433046"	"28"	"0"	"4.521E-05"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADIVENQVMDNR"	"[R].aDIVENQVMDNR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"816.91455"	"1632.82182"	"1632.82129"	"0.33"	"0.00027"	"8/116"	"8"	"116"	"393545.838928223"	"HCD"	"MS2"	"0"	"14.7"	"100.000"	"67.3102"	"22332"	"22332"	"22306"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.7"	""	"15.6"	""	"18.1"	""	"21.5"	"0.5"	"27.8"	"27.7"	""	"806"	"46"	"36.000"	"29.000"	"0.00107227219909892"	"24"	"0"	"4.109E-05"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLVVDEGEDDLGR"	"[R].sLVVDEGEDDLGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK72"	"Copper chaperone for superoxide dismutase OS=Rattus norvegicus OX=10116 GN=Ccs PE=1 SV=1"	"Q9JK72"	"Copper chaperone for superoxide dismutase OS=Rattus norvegicus OX=10116 GN=Ccs PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"816.91711"	"1632.82695"	"1632.82781"	"-0.53"	"-0.00043"	"11/114"	"11"	"114"	"131393.841125488"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"69.4457"	"23217"	"23217"	"23192"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.6"	""	"8.3"	""	"13.3"	""	"13.2"	""	"14.5"	"13.6"	""	"830"	"41"	"36.000"	"29.000"	"0.00337324664208101"	"15"	"0"	"0.002588"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLVVDEGEDDLGR"	"[R].sLVVDEGEDDLGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK72"	"Copper chaperone for superoxide dismutase OS=Rattus norvegicus OX=10116 GN=Ccs PE=1 SV=1"	"Q9JK72"	"Copper chaperone for superoxide dismutase OS=Rattus norvegicus OX=10116 GN=Ccs PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"816.91711"	"1632.82695"	"1632.82781"	"-0.53"	"-0.00043"	"8/114"	"8"	"114"	"95912.5545043945"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"69.7100"	"23311"	"23311"	"23283"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.7"	""	"6.3"	""	"5.7"	""	"6.1"	""	"9.9"	"11.4"	""	"830"	"22"	"36.000"	"29.000"	"0.263055930171625"	"14"	"0"	"0.002713"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTEDLTEEWLR"	"[R].nTEDLTEEWLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63228"	"Glia maturation factor beta OS=Rattus norvegicus OX=10116 GN=Gmfb PE=1 SV=2"	"Q63228"	"Glia maturation factor beta OS=Rattus norvegicus OX=10116 GN=Gmfb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"545.61151"	"1634.81998"	"1634.82233"	"-1.44"	"-0.00078"	"10/112"	"10"	"112"	"304435.246948242"	"HCD"	"MS2"	"18.18366"	"8.2"	"100.000"	"92.6607"	"32452"	"32452"	"32428"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.3"	""	"8.1"	""	"10.8"	""	"18.6"	""	"14.0"	"13.4"	""	"765"	"10"	"35.000"	"28.000"	"3.55329642943326"	"13"	"0.007686"	"0.09452"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTEDLTEEWLR"	"[R].nTEDLTEEWLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63228"	"Glia maturation factor beta OS=Rattus norvegicus OX=10116 GN=Gmfb PE=1 SV=2"	"Q63228"	"Glia maturation factor beta OS=Rattus norvegicus OX=10116 GN=Gmfb PE=1 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"817.91455"	"1634.82182"	"1634.82233"	"-0.31"	"-0.00025"	"9/112"	"9"	"112"	"515941.609985352"	"HCD"	"MS2"	"0"	"29.4"	"100.000"	"92.6274"	"32427"	"32427"	"32420"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.3"	""	"30.3"	""	"36.8"	""	"54.7"	"1.3"	"59.0"	"62.2"	""	"761"	"62"	"35.000"	"28.000"	"2.31395367986552E-05"	"28"	"0"	"2.237E-06"	"1.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTEDLTEEWLR"	"[R].nTEDLTEEWLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63228"	"Glia maturation factor beta OS=Rattus norvegicus OX=10116 GN=Gmfb PE=1 SV=2"	"Q63228"	"Glia maturation factor beta OS=Rattus norvegicus OX=10116 GN=Gmfb PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"817.91473"	"1634.82219"	"1634.82233"	"-0.09"	"-0.00007"	"9/112"	"9"	"112"	"465979.82220459"	"HCD"	"MS2"	"0"	"25.9"	"100.000"	"92.7002"	"32468"	"32468"	"32455"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.6"	""	"22.3"	""	"33.5"	""	"47.7"	""	"54.4"	"55.8"	""	"762"	"63"	"35.000"	"28.000"	"2.13267646169637E-05"	"28"	"0"	"1.402E-05"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTEDLTEEWLR"	"[R].nTEDLTEEWLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63228"	"Glia maturation factor beta OS=Rattus norvegicus OX=10116 GN=Gmfb PE=1 SV=2"	"Q63228"	"Glia maturation factor beta OS=Rattus norvegicus OX=10116 GN=Gmfb PE=1 SV=2"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"817.91498"	"1634.82268"	"1634.82233"	"0.21"	"0.00017"	"6/112"	"6"	"112"	"110730.064147949"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"92.3653"	"32325"	"32325"	"32310"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.2"	""	"8.0"	""	"7.0"	""	"14.8"	""	"16.1"	"16.4"	""	"759"	"25"	"35.000"	"28.000"	"0.110716355181344"	"16"	"0.0003538"	"0.006375"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTEDLTEEWLR"	"[R].nTEDLTEEWLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63228"	"Glia maturation factor beta OS=Rattus norvegicus OX=10116 GN=Gmfb PE=1 SV=2"	"Q63228"	"Glia maturation factor beta OS=Rattus norvegicus OX=10116 GN=Gmfb PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"817.91498"	"1634.82268"	"1634.82233"	"0.21"	"0.00017"	"7/112"	"7"	"112"	"173809.958984375"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"92.4206"	"32356"	"32356"	"32345"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.4"	""	"11.5"	""	"9.9"	""	"20.8"	"1.5"	"24.4"	"22.7"	""	"759"	"40"	"35.000"	"28.000"	"0.00359097002738318"	"20"	"0"	"0.001826"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFDNDGKPR"	"[K].eVFDNDGkPR.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"545.63440"	"1634.88864"	"1634.89024"	"-0.98"	"-0.00053"	"5/92"	"5"	"92"	"3596359.74395752"	"HCD"	"MS2"	"39.03129"	"160.6"	"100.000"	"43.1877"	"12569"	"12569"	"12546"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"241.2"	""	"188.6"	""	"207.7"	""	"275.7"	"4.6"	"301.0"	"303.9"	""	"1058"	"18"	"37.000"	"30.000"	"0.787872010109074"	"17"	"0"	"0.001577"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFDNDGKPR"	"[K].eVFDNDGkPR.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"545.63507"	"1634.89066"	"1634.89024"	"0.26"	"0.00014"	"6/92"	"6"	"92"	"3921714.07940674"	"HCD"	"MS2"	"52.74789"	"175.8"	"100.000"	"43.2733"	"12593"	"12593"	"12572"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"282.9"	""	"192.0"	""	"220.1"	""	"296.5"	""	"339.1"	"336.6"	""	"1069"	"17"	"37.000"	"30.000"	"1.01612634061901"	"15"	"0"	"0.003508"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAmDTR.[L]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.7869"	"0.0000"	"1"	"1"	"1"	"818.41144"	"1635.81560"	"1635.82095"	"-3.27"	"-0.00268"	"9/118"	"9"	"118"	"797090.063354492"	"HCD"	"MS2"	"0"	"39.1"	"100.000"	"62.2972"	"20311"	"20311"	"20295"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.8"	""	"32.2"	""	"47.6"	""	"83.5"	"0.9"	"87.7"	"65.0"	""	"765"	"61"	"35.000"	"28.000"	"2.81599214791737E-05"	""	"0"	"8.689E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAmDTR.[L]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"545.94397"	"1635.81736"	"1635.82095"	"-2.20"	"-0.00120"	"10/118"	"10"	"118"	"1212218.3324585"	"HCD"	"MS2"	"38.83256"	"24.2"	"100.000"	"62.2993"	"20312"	"20312"	"20295"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.1"	""	"33.0"	""	"33.9"	""	"32.9"	""	"47.2"	"49.1"	""	"775"	"37"	"35.000"	"28.000"	"0.00766075735543346"	"15"	"0"	"0.0008273"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VDVLENQAMDTR"	"[R].vDVLENQAmDTR.[L]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"818.41266"	"1635.81804"	"1635.82095"	"-1.78"	"-0.00146"	"5/118"	"5"	"118"	"99327.5879516602"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"69.9176"	"23395"	"23395"	"23369"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.7"	""	"9.6"	""	"9.0"	""	"8.8"	""	"14.2"	"12.2"	""	"771"	"15"	"35.000"	"28.000"	"1.23601682459686"	"20"	"0.0003538"	"0.007033"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAmDTR.[L]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.7843"	"0.0000"	"1"	"1"	"1"	"818.41272"	"1635.81816"	"1635.82095"	"-1.70"	"-0.00139"	"7/118"	"7"	"118"	"702013.211486816"	"HCD"	"MS2"	"0"	"34.8"	"100.000"	"62.4229"	"20346"	"20346"	"20329"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.3"	""	"36.1"	""	"43.2"	""	"75.8"	""	"60.4"	"66.7"	""	"785"	"51"	"35.000"	"28.000"	"0.000314658639879664"	"27"	"0"	"0.0002146"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAmDTR.[L]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"818.41302"	"1635.81877"	"1635.82095"	"-1.33"	"-0.00109"	"9/118"	"9"	"118"	"102832.619506836"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"70.3050"	"23553"	"23553"	"23525"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.2"	""	"7.0"	""	"6.2"	""	"10.4"	""	"11.6"	"14.2"	""	"783"	"35"	"35.000"	"28.000"	"0.0133577024899985"	"22"	"0"	"0.00134"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAmDTR.[L]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"3"	"818.41315"	"1635.81902"	"1635.82095"	"-1.18"	"-0.00097"	"4/118"	"4"	"118"	"104521.972961426"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"70.6651"	"23700"	"23700"	"23669"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.8"	""	"6.1"	""	"8.3"	""	"11.6"	""	"10.5"	"11.2"	""	"783"	"10"	"35.000"	"28.000"	"3.50535305712666"	"15"	"0.003717"	"0.03811"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAmDTR.[L]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"818.41327"	"1635.81926"	"1635.82095"	"-1.03"	"-0.00084"	"8/118"	"8"	"118"	"140052.140991211"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"62.6188"	"20442"	"20442"	"20417"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.8"	""	"10.5"	""	"14.4"	""	"14.9"	""	"15.6"	"15.2"	""	"783"	"49"	"35.000"	"28.000"	"0.000462095528857652"	"26"	"0"	"0.0006068"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAmDTR.[L]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"818.41333"	"1635.81938"	"1635.82095"	"-0.96"	"-0.00078"	"4/118"	"4"	"118"	"95301.6011352539"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"71.4230"	"24023"	"24023"	"23994"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.9"	""	"7.8"	""	"8.1"	""	"7.5"	""	"10.7"	"8.6"	""	"783"	"8"	"35.000"	"28.000"	"5.9392521886033"	"15"	"0.006769"	"0.07871"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAmDTR.[L]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.41364"	"1635.81999"	"1635.82095"	"-0.59"	"-0.00048"	"4/118"	"4"	"118"	"90889.0093383789"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"71.9279"	"24228"	"24228"	"24198"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.2"	""	"8.1"	""	"9.9"	""	"10.2"	""	"9.3"	"11.3"	""	"800"	"15"	"36.000"	"29.000"	"1.14567118796263"	"13"	"0.001211"	"0.0151"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAmDTR.[L]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"1"	"818.41400"	"1635.82073"	"1635.82095"	"-0.14"	"-0.00011"	"5/118"	"5"	"118"	"108330.399963379"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"69.8651"	"23388"	"23388"	"23358"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.2"	""	"9.4"	""	"9.3"	""	"11.9"	""	"12.0"	"18.3"	""	"799"	"8"	"36.000"	"29.000"	"5.9637136662681"	"20"	"0.000936"	"0.01145"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAmDTR.[L]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"818.41418"	"1635.82109"	"1635.82095"	"0.09"	"0.00007"	"3/118"	"3"	"118"	"69090.1581420898"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"71.2448"	"23937"	"23937"	"23907"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.5"	""	"6.9"	""	"5.1"	""	"5.8"	""	"6.1"	"10.3"	""	"803"	"11"	"36.000"	"29.000"	"3.31654236755237"	"14"	"0.008003"	"0.09754"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAmDTR.[L]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.41425"	"1635.82121"	"1635.82095"	"0.16"	"0.00013"	"6/118"	"6"	"118"	"154586.426696777"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"67.0341"	"22235"	"22235"	"22204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.2"	""	"15.0"	""	"11.9"	""	"16.7"	""	"12.6"	"22.8"	""	"808"	"23"	"36.000"	"29.000"	"0.22562195867368"	"14"	"0"	"0.003049"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAmDTR.[L]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.7551"	"0.0000"	"1"	"1"	"1"	"818.41443"	"1635.82158"	"1635.82095"	"0.38"	"0.00031"	"8/118"	"8"	"118"	"534430.843017578"	"HCD"	"MS2"	"0"	"32.6"	"100.000"	"61.9944"	"20191"	"20191"	"20171"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.7"	""	"37.7"	""	"34.6"	""	"65.9"	"0.9"	"67.4"	"57.7"	""	"823"	"49"	"36.000"	"29.000"	"0.000564117846776837"	"27"	"0"	"0.0001937"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAmDTR.[L]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"818.41498"	"1635.82268"	"1635.82095"	"1.06"	"0.00086"	"3/118"	"3"	"118"	"100881.240661621"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"66.4488"	"21996"	"21996"	"21965"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.8"	""	"10.1"	""	"9.4"	""	"11.6"	""	"13.1"	"13.4"	""	"825"	"1"	"36.000"	"29.000"	"31.0759170040159"	"13"	"0.00912"	"0.1191"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAmDTR.[L]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.41632"	"1635.82536"	"1635.82095"	"2.70"	"0.00221"	"5/118"	"5"	"118"	"96223.5897827148"	"HCD"	"MS2"	"30.70812"	"9.2"	"100.000"	"66.7751"	"22114"	"22114"	"22084"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.3"	""	"12.2"	""	"10.7"	""	"14.4"	""	"17.2"	"21.0"	""	"840"	"14"	"36.000"	"29.000"	"1.72682882863899"	"13"	"0.0004639"	"0.007678"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAmDTR.[L]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"818.41754"	"1635.82781"	"1635.82095"	"4.19"	"0.00343"	"9/118"	"9"	"118"	"469253.212280273"	"HCD"	"MS2"	"0"	"28.0"	"100.000"	"62.1204"	"20226"	"20226"	"20215"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.3"	""	"28.6"	""	"27.9"	""	"59.5"	""	"59.9"	"50.4"	""	"860"	"52"	"36.000"	"29.000"	"0.000298173096587125"	"27"	"0"	"0.000141"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIQVDSPYDISR"	"[K].nIQVDSPYDISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"818.43115"	"1635.85503"	"1635.85397"	"0.65"	"0.00053"	"6/122"	"6"	"122"	"234154.656188965"	"HCD"	"MS2"	"9.101601"	"17.0"	"100.000"	"73.0486"	"24684"	"24684"	"24668"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.9"	""	"21.0"	""	"25.5"	""	"27.9"	""	"32.9"	"33.7"	""	"975"	"27"	"36.000"	"29.000"	"0.0941834554545751"	"16"	"0.0006732"	"0.009182"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIQVDSPYDISR"	"[K].nIQVDSPYDISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"818.43134"	"1635.85539"	"1635.85397"	"0.87"	"0.00071"	"6/122"	"6"	"122"	"270246.219970703"	"HCD"	"MS2"	"10.3611"	"15.8"	"100.000"	"73.1743"	"24722"	"24722"	"24700"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.5"	""	"21.8"	""	"21.1"	""	"28.6"	""	"26.9"	"31.7"	""	"970"	"39"	"36.000"	"29.000"	"0.00630582245346145"	"21"	"0"	"0.00209"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAQDVSQDDLIR"	"[K].fAQDVSQDDLIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RK19"	"Vacuolar-sorting protein SNF8 OS=Rattus norvegicus OX=10116 GN=Snf8 PE=1 SV=1"	"Q5RK19"	"Vacuolar-sorting protein SNF8 OS=Rattus norvegicus OX=10116 GN=Snf8 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"818.43146"	"1635.85564"	"1635.85397"	"1.02"	"0.00084"	"9/116"	"9"	"116"	"109324.011474609"	"HCD"	"MS2"	"0"	"6.9"	"100.000"	"81.6047"	"28128"	"28128"	"28102"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.5"	""	"6.4"	""	"8.5"	""	"15.7"	""	"12.2"	"12.7"	""	"970"	"17"	"36.000"	"29.000"	"1.01564454108768"	"18"	"0.004676"	"0.0504"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIQVDSPYDISR"	"[K].nIQVDSPYDISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"818.43243"	"1635.85759"	"1635.85397"	"2.22"	"0.00181"	"7/122"	"7"	"122"	"404868.836975098"	"HCD"	"MS2"	"22.65975"	"21.8"	"100.000"	"72.7348"	"24557"	"24557"	"24529"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.1"	""	"30.7"	""	"25.8"	""	"37.7"	"1.0"	"44.3"	"41.3"	""	"971"	"37"	"36.000"	"29.000"	"0.00948831805778953"	"20"	"0"	"0.001713"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENqAmDTR.[L]"	"N-Term(TMT6plex); Q7(Deamidated); M9(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.0698"	"0.0000"	"1"	"1"	"1"	"818.91492"	"1636.82256"	"1636.80497"	"10.75"	"0.00879"	"7/118"	"7"	"118"	"660361.098999023"	"HCD"	"MS2"	"0"	"40.3"	"100.000"	"62.0334"	"20206"	"20206"	"20193"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.1"	""	"30.7"	""	"44.0"	""	"90.3"	""	"82.8"	"78.1"	""	"841"	"43"	"36.000"	"29.000"	"0.00196682626911267"	"22"	"0"	"0.002554"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KELEEDFIR"	"[R].kELEEDFIR.[S]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"1"	"3"	"3"	"0.3077"	"0.0000"	"1"	"1"	"1"	"546.31482"	"1636.92990"	"1636.93104"	"-0.70"	"-0.00038"	"11/88"	"11"	"88"	"2462272.46313477"	"HCD"	"MS2"	"28.41276"	"96.4"	"100.000"	"69.2954"	"23141"	"23141"	"23123"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"184.0"	""	"115.2"	""	"135.7"	""	"154.2"	"0.3"	"165.2"	"156.5"	""	"960"	"13"	"36.000"	"29.000"	"2.38913800789889"	"22"	"0.0023"	"0.02381"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KELEEDFIR"	"[R].kELEEDFIR.[S]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"1"	"3"	"3"	"0.3571"	"0.0000"	"1"	"1"	"1"	"546.31488"	"1636.93009"	"1636.93104"	"-0.58"	"-0.00032"	"8/88"	"8"	"88"	"2919349.20812988"	"HCD"	"MS2"	"18.75292"	"112.4"	"100.000"	"69.1742"	"23106"	"23106"	"23086"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"210.3"	""	"134.8"	""	"139.3"	""	"171.6"	"2.3"	"209.4"	"196.7"	""	"958"	"14"	"36.000"	"29.000"	"1.86782211618064"	"22"	"0.003717"	"0.03853"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFDETYPDPVR"	"[R].aVFDETYPDPVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.9464"	"0.0000"	"1"	"1"	"1"	"819.41858"	"1637.82988"	"1637.83725"	"-4.50"	"-0.00369"	"7/98"	"7"	"98"	"384793.342407227"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"81.7480"	"28188"	"28188"	"28164"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.9"	""	"24.1"	""	"27.4"	""	"28.7"	""	"32.7"	"30.1"	""	"907"	"56"	"36.000"	"29.000"	"0.000126933802845418"	"19"	"0"	"0.0005804"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFDETYPDPVR"	"[R].aVFDETYPDPVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"819.42029"	"1637.83330"	"1637.83725"	"-2.41"	"-0.00198"	"8/98"	"8"	"98"	"245721.574584961"	"HCD"	"MS2"	"0"	"12.7"	"100.000"	"81.6552"	"28148"	"28148"	"28129"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.8"	""	"16.5"	""	"18.3"	""	"22.9"	""	"20.3"	"23.5"	""	"927"	"33"	"36.000"	"29.000"	"0.025825559462995"	"22"	"0"	"0.003399"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFDETYPDPVR"	"[R].aVFDETYPDPVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"546.61688"	"1637.83609"	"1637.83725"	"-0.71"	"-0.00039"	"8/98"	"8"	"98"	"355972.160461426"	"HCD"	"MS2"	"31.39486"	"9.3"	"100.000"	"82.0776"	"28321"	"28321"	"28297"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.4"	""	"9.5"	""	"12.8"	""	"17.6"	""	"19.2"	"20.4"	""	"921"	"24"	"36.000"	"29.000"	"0.189334446568633"	"15"	"0"	"0.001971"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFDETYPDPVR"	"[R].aVFDETYPDPVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"819.42169"	"1637.83611"	"1637.83725"	"-0.70"	"-0.00057"	"5/98"	"5"	"98"	"84045.657409668"	"HCD"	"MS2"	"11.94683"	"5.0"	"100.000"	"82.3480"	"28428"	"28428"	"28409"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.7"	""	"6.1"	""	"8.1"	""	"5.9"	""	"12.2"	"9.3"	""	"921"	"4"	"36.000"	"29.000"	"18.1647587605666"	"13"	"0.007808"	"0.09557"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFDETYPDPVR"	"[R].aVFDETYPDPVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"819.42200"	"1637.83672"	"1637.83725"	"-0.33"	"-0.00027"	"6/98"	"6"	"98"	"63254.1879882813"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"82.3080"	"28409"	"28409"	"28385"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.6"	""	"3.4"	""	"5.6"	""	"7.7"	""	"5.7"	"6.9"	""	"919"	"19"	"36.000"	"29.000"	"0.631372287518251"	"24"	"0.004938"	"0.05255"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFDETYPDPVR"	"[R].aVFDETYPDPVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"546.61725"	"1637.83719"	"1637.83725"	"-0.04"	"-0.00002"	"9/98"	"9"	"98"	"545158.951293945"	"HCD"	"MS2"	"27.24292"	"16.2"	"100.000"	"81.8186"	"28213"	"28213"	"28199"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.3"	""	"11.3"	""	"21.8"	""	"24.3"	"0.7"	"27.8"	"53.9"	""	"942"	"11"	"36.000"	"29.000"	"3.66455215539748"	"15"	"0.002973"	"0.02838"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFDETYPDPVR"	"[R].aVFDETYPDPVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"819.42224"	"1637.83721"	"1637.83725"	"-0.03"	"-0.00002"	"7/98"	"7"	"98"	"820555.879516602"	"HCD"	"MS2"	"0"	"31.8"	"100.000"	"82.0548"	"28312"	"28312"	"28297"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.7"	""	"40.2"	""	"51.3"	""	"37.3"	""	"64.6"	"63.7"	""	"942"	"60"	"36.000"	"29.000"	"4.96616228200283E-05"	"19"	"0"	"1.263E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFDETYPDPVR"	"[R].aVFDETYPDPVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"819.42242"	"1637.83757"	"1637.83725"	"0.19"	"0.00016"	"7/98"	"7"	"98"	"950034.904724121"	"HCD"	"MS2"	"0"	"40.2"	"100.000"	"81.9685"	"28273"	"28273"	"28258"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"64.2"	""	"54.7"	""	"61.0"	""	"47.8"	"0.9"	"76.0"	"76.2"	""	"942"	"60"	"36.000"	"29.000"	"5.17631750372717E-05"	"19"	"0"	"5.921E-05"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGETLEELMK"	"[R].dGETLEELmk.[L]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"819.93506"	"1638.86284"	"1638.86606"	"-1.96"	"-0.00161"	"8/84"	"8"	"84"	"101902.131530762"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"70.9693"	"23838"	"23838"	"23809"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.3"	""	"7.2"	""	"11.6"	""	"17.8"	""	"19.2"	"19.5"	""	"956"	"16"	"36.000"	"29.000"	"1.22864918416352"	"22"	"0.007808"	"0.09549"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPQAPQDIDVSPR"	"[K].sPQAPQDIDVSPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P20812"	"Cytochrome P450 2A3 OS=Rattus norvegicus OX=10116 GN=Cyp2a3 PE=2 SV=1"	"P20812"	"Cytochrome P450 2A3 OS=Rattus norvegicus OX=10116 GN=Cyp2a3 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"819.93597"	"1638.86467"	"1638.86486"	"-0.12"	"-0.00010"	"11/136"	"11"	"136"	"166728.889587402"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"51.9460"	"16120"	"16120"	"16091"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.6"	""	"18.1"	""	"13.3"	""	"7.2"	""	"14.8"	"9.6"	""	"989"	"23"	"36.000"	"29.000"	"0.25360995438373"	"14"	"0.0023"	"0.02307"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPQAPQDIDVSPR"	"[K].sPQAPQDIDVSPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P20812"	"Cytochrome P450 2A3 OS=Rattus norvegicus OX=10116 GN=Cyp2a3 PE=2 SV=1"	"P20812"	"Cytochrome P450 2A3 OS=Rattus norvegicus OX=10116 GN=Cyp2a3 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"819.93646"	"1638.86565"	"1638.86486"	"0.48"	"0.00039"	"8/136"	"8"	"136"	"145795.159240723"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"51.6255"	"16000"	"16000"	"15973"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.7"	""	"15.1"	""	"11.7"	""	"6.4"	""	"12.5"	"10.1"	""	"978"	"38"	"36.000"	"29.000"	"0.00853707032778126"	"15"	"0.0002479"	"0.005627"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGETLEELMK"	"[R].dGETLEELmk.[L]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"819.93689"	"1638.86650"	"1638.86606"	"0.27"	"0.00022"	"13/84"	"13"	"84"	"149425.753662109"	"HCD"	"MS2"	"0"	"14.1"	"100.000"	"70.6997"	"23714"	"23714"	"23685"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.6"	""	"10.4"	""	"18.3"	""	"30.3"	""	"32.0"	"25.6"	""	"972"	"38"	"36.000"	"29.000"	"0.00844571202772197"	"24"	"0"	"0.002701"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFHNEAQVNPER"	"[R].aFHNEAQVNPER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"547.61584"	"1640.83298"	"1640.83423"	"-0.76"	"-0.00042"	"15/116"	"15"	"116"	"2040771.97857666"	"HCD"	"MS2"	"24.16654"	"52.3"	"100.000"	"30.2696"	"7315"	"7315"	"7290"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.2"	""	"58.1"	""	"56.0"	""	"79.6"	"3.8"	"122.4"	"111.9"	""	"847"	"44"	"36.000"	"29.000"	"0.00168598386729406"	"19"	"0"	"1.529E-05"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFHNEAQVNPER"	"[R].aFHNEAQVNPER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"547.61591"	"1640.83316"	"1640.83423"	"-0.65"	"-0.00036"	"14/116"	"14"	"116"	"2323110.77856445"	"HCD"	"MS2"	"34.3455"	"63.6"	"100.000"	"30.1546"	"7280"	"7280"	"7257"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.5"	""	"59.1"	""	"58.3"	""	"112.1"	""	"152.2"	"149.7"	""	"845"	"35"	"36.000"	"29.000"	"0.0146834028209754"	"15"	"0"	"8.697E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGRPLEMIEPR"	"[K].vnGRPLEMIEPR.[T]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"547.63733"	"1640.89743"	"1640.89914"	"-1.04"	"-0.00057"	"9/114"	"9"	"114"	"1098263.48779297"	"HCD"	"MS2"	"12.46161"	"28.2"	"100.000"	"71.4877"	"24049"	"24049"	"24026"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.5"	""	"40.3"	""	"45.0"	""	"39.9"	""	"51.3"	"49.5"	""	"896"	"24"	"36.000"	"29.000"	"0.171111033336341"	"23"	"0"	"0.0001701"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGRPLEMIEPR"	"[K].vnGRPLEMIEPR.[T]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"3"	"3"	"0.5600"	"0.0000"	"1"	"1"	"1"	"547.63770"	"1640.89853"	"1640.89914"	"-0.37"	"-0.00020"	"9/114"	"9"	"114"	"889765.290039063"	"HCD"	"MS2"	"12.28907"	"24.5"	"100.000"	"71.5468"	"24059"	"24059"	"24040"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.9"	""	"33.1"	""	"43.0"	""	"35.8"	""	"45.3"	"40.3"	""	"890"	"25"	"36.000"	"29.000"	"0.150785649481945"	"25"	"0"	"0.0003335"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEEPSHWK"	"[K].eAAEEPSHWk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"821.43475"	"1641.86223"	"1641.86369"	"-0.89"	"-0.00073"	"7/84"	"7"	"84"	"311529.702453613"	"HCD"	"MS2"	"0"	"24.5"	"100.000"	"42.6565"	"12352"	"12352"	"12330"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.6"	""	"21.5"	""	"32.6"	""	"46.9"	"0.9"	"48.5"	"48.3"	""	"838"	"40"	"36.000"	"29.000"	"0.00402915544642756"	"22"	"0"	"0.002206"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEEPSHWK"	"[K].eAAEEPSHWk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"547.95905"	"1641.86258"	"1641.86369"	"-0.68"	"-0.00037"	"10/84"	"10"	"84"	"29842037.9187012"	"HCD"	"MS2"	"6.763886"	"262.9"	"33.318"	"42.7832"	"12404"	"12404"	"12389"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"364.9"	""	"270.7"	""	"332.1"	""	"501.0"	""	"502.6"	"525.1"	""	"838"	"44"	"36.000"	"29.000"	"0.00179148849297515"	"25"	"0"	"8.26E-05"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEEPSHWK"	"[K].eAAEEPSHWk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"547.95911"	"1641.86277"	"1641.86369"	"-0.56"	"-0.00031"	"13/84"	"13"	"84"	"11993799.6270142"	"HCD"	"MS2"	"24.20656"	"317.8"	"100.000"	"42.4954"	"12286"	"12286"	"12268"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"469.9"	""	"352.6"	""	"403.9"	""	"605.1"	""	"571.3"	"609.2"	""	"848"	"44"	"36.000"	"29.000"	"0.00152182900289482"	"25"	"0"	"2.473E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEEPSHWK"	"[K].eAAEEPSHWk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"547.95917"	"1641.86295"	"1641.86369"	"-0.45"	"-0.00025"	"13/84"	"13"	"84"	"13348406.1382446"	"HCD"	"MS2"	"18.40371"	"368.4"	"100.000"	"42.6176"	"12325"	"12325"	"12308"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"544.5"	""	"414.7"	""	"438.7"	""	"713.8"	""	"653.1"	"727.6"	""	"848"	"44"	"36.000"	"29.000"	"0.00154299975317936"	"25"	"0"	"4.432E-05"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEEPSHWK"	"[K].eAAEEPSHWk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.8298"	"0.0000"	"1"	"1"	"1"	"547.95966"	"1641.86441"	"1641.86369"	"0.44"	"0.00024"	"13/84"	"13"	"84"	"23355583.8083496"	"HCD"	"MS2"	"8.328039"	"276.6"	"44.323"	"42.9100"	"12445"	"12445"	"12431"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"407.2"	""	"293.3"	""	"341.0"	""	"520.7"	""	"520.8"	"540.5"	""	"859"	"47"	"36.000"	"29.000"	"0.000911933496429094"	"23"	"0"	"1.512E-05"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEEPSHWK"	"[K].eAAEEPSHWk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"821.43616"	"1641.86504"	"1641.86369"	"0.82"	"0.00067"	"7/84"	"7"	"84"	"283292.327636719"	"HCD"	"MS2"	"0"	"21.0"	"100.000"	"42.8017"	"12401"	"12401"	"12370"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.2"	""	"21.7"	""	"29.0"	""	"39.0"	""	"36.1"	"46.8"	""	"857"	"32"	"36.000"	"29.000"	"0.0249431228814818"	"21"	"0"	"0.003198"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLYSDDIPHALR"	"[K].nLYSDDIPHALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"3"	"3"	"0.8913"	"0.0000"	"1"	"1"	"1"	"548.29614"	"1642.87387"	"1642.87504"	"-0.71"	"-0.00039"	"16/114"	"16"	"114"	"809401.688476563"	"HCD"	"MS2"	"11.5195"	"17.8"	"100.000"	"67.2511"	"22323"	"22323"	"22300"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.2"	""	"23.8"	""	"24.6"	""	"36.2"	""	"29.1"	"33.8"	""	"890"	"46"	"36.000"	"29.000"	"0.00114119539625039"	"20"	"0"	"6.644E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLYSDDIPHALR"	"[K].nLYSDDIPHALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"548.29626"	"1642.87424"	"1642.87504"	"-0.48"	"-0.00026"	"10/114"	"10"	"114"	"596687.385314941"	"HCD"	"MS2"	"14.44804"	"13.3"	"100.000"	"67.4209"	"22377"	"22377"	"22354"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.3"	""	"15.6"	""	"16.8"	""	"25.0"	""	"25.0"	"28.8"	""	"889"	"39"	"36.000"	"29.000"	"0.00558305318862372"	"24"	"0"	"0.0004807"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSFPEPLREER"	"[K].gPSFPEPLREER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P32362"	"Uroporphyrinogen decarboxylase (Fragment) OS=Rattus norvegicus OX=10116 GN=Urod PE=1 SV=1"	"P32362"	"Uroporphyrinogen decarboxylase (Fragment) OS=Rattus norvegicus OX=10116 GN=Urod PE=1 SV=1"	"1"	"3"	"3"	"0.3636"	"0.0000"	"1"	"1"	"1"	"548.29626"	"1642.87424"	"1642.87504"	"-0.48"	"-0.00026"	"9/110"	"9"	"110"	"2470407.56628418"	"HCD"	"MS2"	"26.82043"	"76.0"	"100.000"	"56.0247"	"17778"	"17778"	"17757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"109.4"	""	"96.1"	""	"105.9"	""	"129.6"	""	"150.7"	"133.4"	""	"889"	"11"	"36.000"	"29.000"	"3.27244054836411"	"21"	"0.001211"	"0.01508"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSFPEPLREER"	"[K].gPSFPEPLREER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P32362"	"Uroporphyrinogen decarboxylase (Fragment) OS=Rattus norvegicus OX=10116 GN=Urod PE=1 SV=1"	"P32362"	"Uroporphyrinogen decarboxylase (Fragment) OS=Rattus norvegicus OX=10116 GN=Urod PE=1 SV=1"	"1"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"548.29633"	"1642.87442"	"1642.87504"	"-0.37"	"-0.00020"	"6/110"	"6"	"110"	"2232257.92736816"	"HCD"	"MS2"	"23.06197"	"70.8"	"100.000"	"55.8017"	"17701"	"17701"	"17681"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"99.1"	""	"89.2"	""	"101.4"	""	"110.2"	""	"138.9"	"131.9"	""	"885"	"18"	"36.000"	"29.000"	"0.632285576641163"	"20"	"0.002973"	"0.02824"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSFPEPLREER"	"[K].gPSFPEPLREER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P32362"	"Uroporphyrinogen decarboxylase (Fragment) OS=Rattus norvegicus OX=10116 GN=Urod PE=1 SV=1"	"P32362"	"Uroporphyrinogen decarboxylase (Fragment) OS=Rattus norvegicus OX=10116 GN=Urod PE=1 SV=1"	"1"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"548.29651"	"1642.87497"	"1642.87504"	"-0.04"	"-0.00002"	"9/110"	"9"	"110"	"1139910.23303223"	"HCD"	"MS2"	"11.71621"	"38.2"	"100.000"	"56.1100"	"17827"	"17827"	"17805"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.6"	""	"53.8"	""	"54.6"	""	"60.1"	""	"71.6"	"70.2"	""	"895"	"14"	"36.000"	"29.000"	"1.65498110451669"	"20"	"0.004942"	"0.05437"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEDYALPSYVDR"	"[K].sEDYALPSYVDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"2"	"2"	"0.9556"	"0.0000"	"1"	"1"	"1"	"822.40698"	"1643.80669"	"1643.81143"	"-2.89"	"-0.00237"	"15/108"	"15"	"108"	"296446.406921387"	"HCD"	"MS2"	"37.11386"	"17.9"	"100.000"	"73.6273"	"24919"	"24919"	"24893"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.9"	""	"16.5"	""	"20.5"	""	"30.1"	""	"32.0"	"40.7"	""	"650"	"45"	"35.000"	"28.000"	"0.000990565871629096"	"17"	"0"	"0.0001929"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEDYALPSYVDR"	"[K].sEDYALPSYVDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.40814"	"1643.80901"	"1643.81143"	"-1.47"	"-0.00121"	"4/108"	"4"	"108"	"78662.0951538086"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"74.4151"	"25226"	"25226"	"25201"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.3"	""	"6.3"	""	"9.2"	""	"9.8"	""	"7.0"	"10.8"	""	"655"	"10"	"35.000"	"28.000"	"3.5011547294542"	"13"	"0.004606"	"0.04943"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEDYALPSYVDR"	"[K].sEDYALPSYVDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"822.40924"	"1643.81120"	"1643.81143"	"-0.14"	"-0.00011"	"10/108"	"10"	"108"	"362639.282714844"	"HCD"	"MS2"	"9.708057"	"21.3"	"100.000"	"73.7924"	"24973"	"24973"	"24953"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.6"	""	"26.8"	""	"24.0"	""	"34.0"	""	"39.7"	"43.0"	""	"664"	"40"	"35.000"	"28.000"	"0.00317788431669889"	"20"	"0"	"0.0004329"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEDYALPSYVDR"	"[K].sEDYALPSYVDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"822.40924"	"1643.81120"	"1643.81143"	"-0.14"	"-0.00011"	"11/108"	"11"	"108"	"696814.682067871"	"HCD"	"MS2"	"0"	"37.8"	"100.000"	"74.1060"	"25100"	"25100"	"25082"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.1"	""	"46.9"	""	"53.1"	""	"55.0"	""	"67.3"	"78.9"	""	"664"	"62"	"35.000"	"28.000"	"1.90606665452833E-05"	"22"	"0"	"1.163E-05"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEDYALPSYVDR"	"[K].sEDYALPSYVDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"822.41046"	"1643.81365"	"1643.81143"	"1.35"	"0.00111"	"10/108"	"10"	"108"	"775420.224182129"	"HCD"	"MS2"	"0"	"39.3"	"100.000"	"73.9433"	"25047"	"25047"	"25028"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.1"	""	"45.4"	""	"49.2"	""	"53.0"	""	"75.0"	"84.4"	""	"659"	"58"	"35.000"	"28.000"	"5.60861228516136E-05"	"22"	"0"	"4.333E-06"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVGPEEALSSGEAR"	"[K].lVGPEEALSSGEAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U367"	"Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Rattus norvegicus OX=10116 GN=Plod3 PE=1 SV=1"	"Q5U367"	"Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Rattus norvegicus OX=10116 GN=Plod3 PE=1 SV=1"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"822.44318"	"1643.87908"	"1643.88018"	"-0.67"	"-0.00055"	"10/118"	"10"	"118"	"124071.54699707"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"70.9758"	"23827"	"23827"	"23797"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.4"	""	"6.7"	""	"6.5"	""	"11.3"	""	"16.2"	"13.9"	""	"932"	"23"	"36.000"	"29.000"	"0.226665757852221"	"15"	"0.0001301"	"0.004814"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEGSDEAPLLQR"	"[R].sLEGSDEAPLLQR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"822.44397"	"1643.88066"	"1643.88018"	"0.29"	"0.00024"	"5/110"	"5"	"110"	"112361.423278809"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"68.8861"	"22989"	"22989"	"22959"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.3"	""	"9.1"	""	"10.6"	""	"15.6"	""	"12.7"	"20.9"	""	"928"	"26"	"36.000"	"29.000"	"0.123173698075665"	"28"	"0.0008629"	"0.009522"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMTGYGMPR"	"[RK].gASQAGmTGYGmPR.[Q]"	"N-Term(TMT6plex); M7(Oxidation); M12(Oxidation)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.88708"	"1644.76689"	"1644.76714"	"-0.15"	"-0.00012"	"5/134"	"5"	"134"	"157860.770812988"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"26.7000"	"5879"	"5879"	"5854"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.5"	""	"6.8"	""	"2.8"	""	"20.6"	""	"17.3"	"15.2"	""	"415"	"24"	"33.000"	"26.000"	"0.0861029638466303"	"14"	"0"	"0.002399"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMTGYGMPR"	"[RK].gASQAGmTGYGmPR.[Q]"	"N-Term(TMT6plex); M7(Oxidation); M12(Oxidation)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.88818"	"1644.76909"	"1644.76714"	"1.18"	"0.00097"	"6/134"	"6"	"134"	"230676.578552246"	"HCD"	"MS2"	"100"	"9.8"	"100.000"	"26.3902"	"5753"	"5753"	"5729"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.0"	""	"5.4"	""	"10.8"	""	"30.1"	""	"25.4"	"17.3"	""	"422"	"8"	"33.000"	"26.000"	"3.32875977906562"	"13"	"0.0008629"	"0.01038"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMTGYGMPR"	"[RK].gASQAGmTGYGmPR.[Q]"	"N-Term(TMT6plex); M7(Oxidation); M12(Oxidation)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"822.88818"	"1644.76909"	"1644.76714"	"1.18"	"0.00097"	"18/134"	"18"	"134"	"298445.209838867"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"26.4893"	"5777"	"5777"	"5747"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.1"	""	"6.4"	""	"12.6"	""	"39.0"	""	"26.0"	"17.8"	""	"422"	"46"	"33.000"	"26.000"	"0.000589226750501078"	"21"	"0.001374"	"0.01744"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTDEEVDELYR"	"[R].fTDEEVDELYR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.90094"	"1644.79460"	"1644.79545"	"-0.51"	"-0.00042"	"7/92"	"7"	"92"	"195930.259521484"	"HCD"	"MS2"	"5.009076"	"13.7"	"100.000"	"88.9785"	"31022"	"31022"	"31013"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.0"	""	"12.5"	""	"13.0"	""	"32.4"	""	"32.3"	"26.5"	""	"579"	"37"	"34.000"	"27.000"	"0.00542810910085517"	"15"	"0"	"0.000487"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTDEEVDELYR"	"[R].fTDEEVDELYR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.90112"	"1644.79497"	"1644.79545"	"-0.29"	"-0.00024"	"6/92"	"6"	"92"	"189336.046691895"	"HCD"	"MS2"	"5.385371"	"12.2"	"100.000"	"88.9597"	"31012"	"31012"	"31003"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.4"	""	"11.6"	""	"16.7"	""	"23.7"	""	"20.8"	"24.7"	""	"587"	"27"	"34.000"	"27.000"	"0.056833984641833"	"14"	"0.001728"	"0.02002"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITDIGLQGAQDR"	"[R].eITDIGLQGAQDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02759"	"Arachidonate 15-lipoxygenase OS=Rattus norvegicus OX=10116 GN=Alox15 PE=1 SV=3"	"Q02759"	"Arachidonate 15-lipoxygenase OS=Rattus norvegicus OX=10116 GN=Alox15 PE=1 SV=3"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"822.94098"	"1644.87468"	"1644.87543"	"-0.45"	"-0.00037"	"5/128"	"5"	"128"	"99978.8426513672"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"70.1581"	"23507"	"23507"	"23484"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.6"	""	"6.8"	""	"11.9"	""	"11.9"	""	"23.3"	"9.7"	""	"969"	"29"	"36.000"	"29.000"	"0.0628483356791726"	"26"	"0.0003538"	"0.006392"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPVHNHGELSAI"	"[K].lEPVHNHGELSAI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"548.96820"	"1644.89005"	"1644.89069"	"-0.39"	"-0.00021"	"14/114"	"14"	"114"	"1813421.37139893"	"HCD"	"MS2"	"20.87003"	"22.1"	"100.000"	"57.9525"	"18578"	"18578"	"18559"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.6"	""	"25.2"	""	"25.0"	""	"45.2"	""	"45.5"	"46.4"	""	"1019"	"27"	"37.000"	"30.000"	"0.0973070235239499"	"14"	"0"	"0.0002403"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPVHNHGELSAI"	"[K].lEPVHNHGELSAI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"548.96838"	"1644.89060"	"1644.89069"	"-0.05"	"-0.00003"	"9/114"	"9"	"114"	"2667289.81665039"	"HCD"	"MS2"	"21.60345"	"30.1"	"100.000"	"58.1043"	"18625"	"18625"	"18607"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.7"	""	"33.3"	""	"38.8"	""	"55.0"	"0.8"	"59.3"	"57.7"	""	"1057"	"25"	"37.000"	"30.000"	"0.15383139968982"	"14"	"0"	"0.0002962"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWDYETGDFER"	"[K].vWDYETGDFER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"823.38647"	"1645.76567"	"1645.76957"	"-2.37"	"-0.00195"	"12/94"	"12"	"94"	"261310.756408691"	"HCD"	"MS2"	"0"	"15.3"	"100.000"	"88.5586"	"30863"	"30863"	"30852"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.0"	""	"18.9"	""	"18.8"	""	"26.7"	""	"27.7"	"20.7"	""	"378"	"34"	"32.000"	"25.000"	"0.00777072972887547"	"15"	"0"	"0.001167"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWDYETGDFER"	"[K].vWDYETGDFER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"823.38666"	"1645.76604"	"1645.76957"	"-2.14"	"-0.00176"	"12/94"	"12"	"94"	"559671.35760498"	"HCD"	"MS2"	"2.302039"	"34.2"	"100.000"	"88.8254"	"30964"	"30964"	"30954"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.8"	""	"41.2"	""	"38.7"	""	"58.2"	"0.7"	"67.2"	"65.3"	""	"384"	"31"	"32.000"	"25.000"	"0.01604357795004"	"14"	"0"	"0.0014"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWDYETGDFER"	"[K].vWDYETGDFER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"823.38782"	"1645.76836"	"1645.76957"	"-0.73"	"-0.00060"	"10/94"	"10"	"94"	"567780.013183594"	"HCD"	"MS2"	"0"	"34.6"	"100.000"	"88.7742"	"30940"	"30940"	"30934"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.0"	""	"38.4"	""	"45.6"	""	"64.9"	""	"61.2"	"62.8"	""	"386"	"36"	"32.000"	"25.000"	"0.00442137456984181"	"15"	"0"	"0.000352"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWDYETGDFER"	"[K].vWDYETGDFER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"823.38849"	"1645.76970"	"1645.76957"	"0.08"	"0.00007"	"12/94"	"12"	"94"	"184149.777038574"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"88.5044"	"30838"	"30838"	"30828"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.8"	""	"17.9"	""	"12.8"	""	"15.8"	""	"18.0"	"18.7"	""	"392"	"32"	"32.000"	"25.000"	"0.0115946080298393"	"15"	"0"	"0.002467"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPVHNHGELSAI"	"[K].lEPVHnHGELSAI.[-]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"549.29651"	"1645.87497"	"1645.87470"	"0.16"	"0.00009"	"10/114"	"10"	"114"	"1098857.03533936"	"HCD"	"MS2"	"14.80745"	"25.4"	"100.000"	"64.6295"	"21245"	"21245"	"21223"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.5"	""	"26.7"	""	"31.6"	""	"52.0"	"0.3"	"41.6"	"55.6"	""	"1110"	"16"	"37.000"	"30.000"	"1.48010655880942"	"13"	"0"	"0.001542"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEELEEGQK"	"[R].lLEELEEGQk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"549.31818"	"1645.93998"	"1645.94127"	"-0.79"	"-0.00043"	"10/82"	"10"	"82"	"286533.921264648"	"HCD"	"MS2"	"2.877939"	"7.6"	"100.000"	"99.7399"	"34929"	"34929"	"34924"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.8"	""	"9.2"	""	"8.4"	""	"10.6"	""	"17.2"	"15.8"	""	"1029"	"35"	"37.000"	"30.000"	"0.0145340074709413"	"21"	"0.0001301"	"0.004961"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEELEEGQK"	"[R].lLEELEEGQk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"823.47437"	"1645.94145"	"1645.94127"	"0.11"	"0.00009"	"9/82"	"9"	"82"	"110144.178344727"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"99.5318"	"34825"	"34825"	"34819"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.0"	""	"4.7"	""	"8.7"	""	"10.9"	""	"11.9"	"9.6"	""	"1021"	"26"	"37.000"	"30.000"	"0.135830014302729"	"17"	"0.0007829"	"0.009434"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGDLTHFNQK"	"[K].eGDLTHFNQk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"549.63513"	"1646.89084"	"1646.89024"	"0.37"	"0.00020"	"9/84"	"9"	"84"	"591080.327026367"	"HCD"	"MS2"	"35.06825"	"28.5"	"100.000"	"49.1146"	"14965"	"14965"	"14934"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.5"	""	"34.3"	""	"40.0"	""	"47.9"	""	"50.8"	"54.7"	""	"1199"	"23"	"37.000"	"30.000"	"0.310305295754365"	"20"	"0.003111"	"0.0317"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGPAESDEFLAR"	"[R].iLGPAESDEFLAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"823.95111"	"1646.89495"	"1646.89510"	"-0.10"	"-0.00008"	"5/102"	"5"	"102"	"102466.762207031"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"97.3974"	"34163"	"34163"	"34156"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.4"	""	"6.2"	""	"6.7"	""	"5.2"	""	"11.6"	"6.8"	""	"1215"	"17"	"37.000"	"30.000"	"1.27510597930129"	"21"	"0.001546"	"0.01945"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGPAESDEFLAR"	"[R].iLGPAESDEFLAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"823.95123"	"1646.89519"	"1646.89510"	"0.05"	"0.00004"	"9/102"	"9"	"102"	"97765.7838745117"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"97.1386"	"34077"	"34077"	"34074"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.3"	""	"5.9"	""	"4.2"	""	"7.0"	""	"4.9"	"10.9"	""	"1204"	"12"	"37.000"	"30.000"	"3.72045872883326"	"21"	"0.001546"	"0.01893"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGPAESDEFLAR"	"[R].iLGPAESDEFLAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"823.95129"	"1646.89531"	"1646.89510"	"0.13"	"0.00010"	"11/102"	"11"	"102"	"116559.508728027"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"97.4491"	"34157"	"34157"	"34153"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.1"	""	"6.8"	""	"8.3"	""	"6.0"	""	"8.3"	"8.9"	""	"1204"	"25"	"37.000"	"30.000"	"0.182640249288495"	"14"	"0.0003538"	"0.006442"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLELQADSAVK"	"[K].dLELQADSAVk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"823.97205"	"1646.93682"	"1646.93652"	"0.18"	"0.00015"	"5/106"	"5"	"106"	"92745.4918823242"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"73.6955"	"24934"	"24934"	"24905"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.6"	""	"6.8"	""	"6.4"	""	"21.7"	""	"24.1"	"19.7"	""	"1103"	"3"	"37.000"	"30.000"	"25.150435914714"	"13"	"0.009417"	"0.1229"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLELQADSAVK"	"[K].dLELQADSAVk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"3"	"3"	"0.7714"	"0.0000"	"1"	"1"	"1"	"549.65051"	"1646.93698"	"1646.93652"	"0.28"	"0.00015"	"12/106"	"12"	"106"	"523878.773864746"	"HCD"	"MS2"	"31.30623"	"14.2"	"100.000"	"73.6149"	"24901"	"24901"	"24875"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.4"	""	"9.7"	""	"13.6"	""	"34.1"	""	"39.8"	"24.9"	""	"1102"	"35"	"37.000"	"30.000"	"0.0181197248612667"	"23"	"0"	"0.001501"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKDSEAELQR"	"[K].lkDSEAELQR.[R]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"549.65363"	"1646.94632"	"1646.94776"	"-0.87"	"-0.00048"	"7/96"	"7"	"96"	"2358962.7623291"	"HCD"	"MS2"	"23.08278"	"101.3"	"100.000"	"44.4788"	"13089"	"13089"	"13064"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"190.2"	""	"104.1"	""	"130.8"	""	"160.5"	"1.1"	"201.7"	"170.8"	""	"1075"	"17"	"37.000"	"30.000"	"1.13078091137448"	"14"	"0.003189"	"0.03226"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVEEYVYEMR"	"[K].nAVEEYVYEmR.[D]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"824.39746"	"1647.78765"	"1647.78859"	"-0.57"	"-0.00047"	"6/110"	"6"	"110"	"153923.174560547"	"HCD"	"MS2"	"44.98519"	"9.0"	"100.000"	"68.6416"	"22889"	"22889"	"22863"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.5"	""	"9.3"	""	"12.4"	""	"14.3"	""	"16.5"	"18.2"	""	"513"	"20"	"34.000"	"27.000"	"0.244392216072066"	"14"	"0.00379"	"0.03907"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVEEYVYEMR"	"[K].nAVEEYVYEmR.[D]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"824.39771"	"1647.78813"	"1647.78859"	"-0.28"	"-0.00023"	"6/110"	"6"	"110"	"140504.827453613"	"HCD"	"MS2"	"29.0429"	"10.7"	"100.000"	"68.3373"	"22765"	"22765"	"22735"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.2"	""	"12.4"	""	"11.2"	""	"17.6"	""	"24.4"	"21.9"	""	"525"	"19"	"34.000"	"27.000"	"0.300005562882315"	"17"	"0.0001301"	"0.004732"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGAVVENTTTGLSR"	"[K].gGGAVVENTTTGLSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63530"	"Phosphotriesterase-related protein OS=Rattus norvegicus OX=10116 GN=Pter PE=2 SV=2"	"Q63530"	"Phosphotriesterase-related protein OS=Rattus norvegicus OX=10116 GN=Pter PE=2 SV=2"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"824.44580"	"1647.88432"	"1647.88633"	"-1.22"	"-0.00100"	"5/140"	"5"	"140"	"165926.184448242"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"44.6535"	"13148"	"13148"	"13123"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.5"	""	"18.1"	""	"10.8"	""	"24.5"	""	"25.5"	"24.8"	""	"1139"	"22"	"37.000"	"30.000"	"0.338449384331569"	"20"	"0.0001301"	"0.004123"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGAVVENTTTGLSR"	"[K].gGGAVVENTTTGLSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63530"	"Phosphotriesterase-related protein OS=Rattus norvegicus OX=10116 GN=Pter PE=2 SV=2"	"Q63530"	"Phosphotriesterase-related protein OS=Rattus norvegicus OX=10116 GN=Pter PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"824.44684"	"1647.88640"	"1647.88633"	"0.04"	"0.00004"	"5/140"	"5"	"140"	"169906.610961914"	"HCD"	"MS2"	"12.16906"	"11.9"	"100.000"	"44.5622"	"13123"	"13123"	"13096"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.4"	""	"11.7"	""	"15.0"	""	"20.7"	""	"25.7"	"27.4"	""	"1165"	"27"	"37.000"	"30.000"	"0.118112518412115"	"14"	"0"	"0.0008151"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSVVADTPELQR"	"[K].gFSVVADTPELQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9268"	"0.0000"	"1"	"1"	"1"	"549.96802"	"1647.88950"	"1647.89035"	"-0.52"	"-0.00028"	"15/112"	"15"	"112"	"946902.012634277"	"HCD"	"MS2"	"15.1792"	"12.2"	"100.000"	"82.3383"	"28421"	"28421"	"28401"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.9"	""	"14.0"	""	"18.6"	""	"18.1"	""	"23.2"	"22.7"	""	"1159"	"41"	"37.000"	"30.000"	"0.00507053097744299"	"18"	"0"	"1.121E-05"	"0.892"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSVVADTPELQR"	"[K].gFSVVADTPELQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8298"	"0.0000"	"1"	"1"	"1"	"549.96820"	"1647.89005"	"1647.89035"	"-0.18"	"-0.00010"	"7/112"	"7"	"112"	"1030199.84393311"	"HCD"	"MS2"	"16.78148"	"11.2"	"100.000"	"82.3737"	"28438"	"28438"	"28418"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.8"	""	"15.3"	""	"14.1"	""	"22.2"	""	"20.0"	"21.6"	""	"1175"	"47"	"37.000"	"30.000"	"0.00114289904795331"	"23"	"0"	"1.216E-05"	"0.884"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSVVADTPELQR"	"[K].gFSVVADTPELQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"824.44867"	"1647.89006"	"1647.89035"	"-0.18"	"-0.00014"	"7/112"	"7"	"112"	"232623.479614258"	"HCD"	"MS2"	"34.91594"	"15.8"	"100.000"	"82.5306"	"28501"	"28501"	"28483"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.3"	""	"21.3"	""	"15.6"	""	"36.0"	""	"26.9"	"29.8"	""	"1175"	"21"	"37.000"	"30.000"	"0.437530034669768"	"19"	"0.0001301"	"0.004668"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSVVADTPELQR"	"[K].gFSVVADTPELQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"824.44867"	"1647.89006"	"1647.89035"	"-0.18"	"-0.00014"	"8/112"	"8"	"112"	"219166.737854004"	"HCD"	"MS2"	"17.37941"	"13.5"	"100.000"	"82.4537"	"28467"	"28467"	"28454"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.8"	""	"17.1"	""	"21.4"	""	"25.3"	""	"23.6"	"23.6"	""	"1175"	"32"	"37.000"	"30.000"	"0.0378449443490166"	"15"	"0"	"0.0001624"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSVVADTPELQR"	"[K].gFSVVADTPELQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"824.44934"	"1647.89141"	"1647.89035"	"0.64"	"0.00053"	"5/112"	"5"	"112"	"117543.184753418"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"82.1506"	"28347"	"28347"	"28323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.8"	""	"7.5"	""	"11.4"	""	"11.6"	""	"13.1"	"10.7"	""	"1170"	"23"	"37.000"	"30.000"	"0.32148141120671"	"14"	"0.000936"	"0.01166"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSVVADTPELQR"	"[K].gFSVVADTPELQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"824.44946"	"1647.89165"	"1647.89035"	"0.79"	"0.00065"	"7/112"	"7"	"112"	"136142.340942383"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"82.2255"	"28379"	"28379"	"28363"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.2"	""	"9.7"	""	"10.6"	""	"13.8"	""	"16.6"	"12.6"	""	"1167"	"30"	"37.000"	"30.000"	"0.0538320427744804"	"15"	"0"	"0.002077"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVVETPLLHPER"	"[R].eVVETPLLHPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"549.97974"	"1647.92466"	"1647.92674"	"-1.26"	"-0.00069"	"11/108"	"11"	"108"	"1573807.98577881"	"HCD"	"MS2"	"53.15269"	"14.7"	"100.000"	"60.2232"	"19465"	"19465"	"19456"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.1"	""	"18.2"	""	"23.3"	""	"27.4"	""	"24.6"	"27.3"	""	"1181"	"38"	"37.000"	"30.000"	"0.00908280315098942"	"17"	"0"	"0.0004083"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVVETPLLHPER"	"[R].eVVETPLLHPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"549.97992"	"1647.92521"	"1647.92674"	"-0.93"	"-0.00051"	"11/108"	"11"	"108"	"1613386.94354248"	"HCD"	"MS2"	"69.14529"	"14.9"	"100.000"	"60.0005"	"19389"	"19389"	"19377"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.3"	""	"15.8"	""	"17.5"	""	"28.4"	""	"34.1"	"25.2"	""	"1173"	"39"	"37.000"	"30.000"	"0.00710015805327358"	"20"	"0"	"0.0001302"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVVETPLLHPER"	"[R].eVVETPLLHPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"549.97998"	"1647.92539"	"1647.92674"	"-0.82"	"-0.00045"	"9/108"	"9"	"108"	"1159494.39031982"	"HCD"	"MS2"	"6.286618"	"16.3"	"100.000"	"60.8053"	"19692"	"19692"	"19674"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.1"	""	"22.8"	""	"24.3"	""	"25.3"	"2.7"	"28.1"	"27.8"	""	"1204"	"63"	"37.000"	"30.000"	"3.21807744356977E-05"	"26"	"0"	"9.788E-07"	"1.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVVETPLLHPER"	"[R].eVVETPLLHPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"3"	"3"	"0.8846"	"0.0000"	"1"	"1"	"1"	"549.98004"	"1647.92557"	"1647.92674"	"-0.71"	"-0.00039"	"14/108"	"14"	"108"	"1141685.36468506"	"HCD"	"MS2"	"5.58169"	"15.4"	"100.000"	"60.6216"	"19633"	"19633"	"19614"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.2"	""	"20.9"	""	"18.6"	""	"26.7"	"1.5"	"31.4"	"28.3"	""	"1195"	"52"	"37.000"	"30.000"	"0.000367568181444146"	"22"	"0"	"3.564E-05"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVVETPLLHPER"	"[R].eVVETPLLHPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"549.98029"	"1647.92630"	"1647.92674"	"-0.26"	"-0.00014"	"10/108"	"10"	"108"	"2234402.24157715"	"HCD"	"MS2"	"0"	"20.0"	"100.000"	"60.2822"	"19497"	"19497"	"19485"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.8"	""	"23.1"	""	"28.1"	""	"36.3"	"2.1"	"35.4"	"35.7"	""	"1198"	"52"	"37.000"	"30.000"	"0.000398498620564843"	"24"	"0"	"2.504E-06"	"1.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVVETPLLHPER"	"[R].eVVETPLLHPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"549.98041"	"1647.92667"	"1647.92674"	"-0.04"	"-0.00002"	"10/108"	"10"	"108"	"2410243.73260498"	"HCD"	"MS2"	"7.247954"	"20.5"	"100.000"	"60.5027"	"19571"	"19571"	"19560"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.0"	""	"24.1"	""	"32.7"	""	"30.9"	""	"40.8"	"41.6"	""	"1179"	"52"	"37.000"	"30.000"	"0.000390376628932189"	"24"	"0"	"6.743E-06"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADIVENQVMDNR"	"[R].aDIVENQVmDNR.[M]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"824.91034"	"1648.81340"	"1648.81620"	"-1.70"	"-0.00140"	"11/116"	"11"	"116"	"143557.638366699"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"52.8791"	"16512"	"16512"	"16481"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.5"	""	"10.1"	""	"7.2"	""	"17.2"	""	"16.6"	"16.6"	""	"726"	"38"	"35.000"	"28.000"	"0.0052711651718435"	"18"	"0"	"0.000357"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQMVQEDLEk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"824.95178"	"1648.89629"	"1648.89803"	"-1.06"	"-0.00087"	"8/94"	"8"	"94"	"132940.706420898"	"HCD"	"MS2"	"8.108586"	"12.6"	"100.000"	"67.9060"	"22589"	"22589"	"22562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.9"	""	"12.8"	""	"14.6"	""	"15.3"	""	"32.9"	"27.5"	""	"1171"	"21"	"37.000"	"30.000"	"0.483645219477439"	"22"	"0.003507"	"0.03605"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQMVQEDLEk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.4750"	"0.0000"	"1"	"1"	"1"	"550.30389"	"1648.89713"	"1648.89803"	"-0.55"	"-0.00030"	"13/94"	"13"	"94"	"2973200.81616211"	"HCD"	"MS2"	"14.08858"	"80.6"	"100.000"	"67.6223"	"22474"	"22474"	"22456"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"128.8"	""	"80.7"	""	"99.9"	""	"103.7"	""	"171.2"	"182.2"	""	"1166"	"40"	"37.000"	"30.000"	"0.00534156545741126"	""	"0"	"0.0007487"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQMVQEDLEk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"824.95233"	"1648.89739"	"1648.89803"	"-0.39"	"-0.00032"	"18/94"	"18"	"94"	"1091617.49346924"	"HCD"	"MS2"	"0"	"96.5"	"100.000"	"67.5854"	"22459"	"22459"	"22440"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"170.6"	""	"95.4"	""	"106.7"	""	"118.6"	""	"202.9"	"223.1"	""	"1168"	"66"	"37.000"	"30.000"	"1.58275191302425E-05"	""	"0"	"8.426E-06"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQMVQEDLEk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.4651"	"0.0000"	"1"	"1"	"1"	"550.30414"	"1648.89786"	"1648.89803"	"-0.10"	"-0.00006"	"11/94"	"11"	"94"	"3071547.85925293"	"HCD"	"MS2"	"16.91194"	"78.6"	"100.000"	"67.7139"	"22496"	"22496"	"22478"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"121.8"	""	"90.8"	""	"82.1"	""	"99.9"	"0.4"	"178.6"	"173.1"	""	"1151"	"43"	"37.000"	"30.000"	"0.00291773152612093"	""	"0"	"0.00259"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQMVQEDLEk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"824.95276"	"1648.89824"	"1648.89803"	"0.13"	"0.00011"	"13/94"	"13"	"94"	"277188.364929199"	"HCD"	"MS2"	"0"	"26.3"	"100.000"	"67.9792"	"22604"	"22604"	"22585"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.4"	""	"31.3"	""	"30.0"	""	"34.1"	""	"53.4"	"57.6"	""	"1154"	"47"	"37.000"	"30.000"	"0.00109945083426479"	"27"	"0"	"0.001744"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQMVQEDLEk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"824.95300"	"1648.89873"	"1648.89803"	"0.43"	"0.00035"	"9/94"	"9"	"94"	"1023601.02062988"	"HCD"	"MS2"	"0"	"95.5"	"100.000"	"67.6769"	"22481"	"22481"	"22462"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"163.5"	""	"106.0"	""	"104.8"	""	"123.3"	""	"207.6"	"201.9"	""	"1141"	"63"	"37.000"	"30.000"	"3.17874469765666E-05"	"30"	"0"	"2.853E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDATEQTDLAK"	"[K].vDATEQTDLAk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"824.96124"	"1648.91521"	"1648.91579"	"-0.35"	"-0.00029"	"14/102"	"14"	"102"	"201930.174438477"	"HCD"	"MS2"	"0"	"18.2"	"100.000"	"56.7870"	"18089"	"18089"	"18068"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.6"	""	"21.3"	""	"18.6"	""	"26.9"	""	"39.7"	"38.3"	""	"1144"	"51"	"37.000"	"30.000"	"0.000433906372916693"	""	"0"	"0.0003433"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDATEQTDLAK"	"[K].vDATEQTDLAk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.5968"	"0.0000"	"1"	"1"	"1"	"824.96124"	"1648.91521"	"1648.91579"	"-0.35"	"-0.00029"	"9/102"	"9"	"102"	"374446.633056641"	"HCD"	"MS2"	"0"	"34.0"	"100.000"	"56.5569"	"18009"	"18009"	"17990"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.1"	""	"30.2"	""	"36.0"	""	"59.2"	"0.4"	"63.4"	"74.6"	""	"1144"	"62"	"37.000"	"30.000"	"3.57598780267692E-05"	""	"0"	"0.0001195"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASDEEIQGTK"	"[R].iASDEEIQGTk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"824.96179"	"1648.91631"	"1648.91579"	"0.32"	"0.00026"	"9/100"	"9"	"100"	"142687.399230957"	"HCD"	"MS2"	"100"	"13.9"	"100.000"	"54.4629"	"17156"	"17156"	"17129"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.7"	""	"13.2"	""	"15.1"	""	"29.4"	""	"30.5"	"30.2"	""	"1150"	"21"	"37.000"	"30.000"	"0.498503078560975"	"17"	"0.002937"	"0.02741"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASDEEIQGTK"	"[R].iASDEEIQGTk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"824.96191"	"1648.91655"	"1648.91579"	"0.46"	"0.00038"	"8/100"	"8"	"100"	"153345.974914551"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"54.6778"	"17231"	"17231"	"17200"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.4"	""	"9.5"	""	"14.2"	""	"21.6"	""	"33.8"	"27.7"	""	"1157"	"54"	"37.000"	"30.000"	"0.000222999229909649"	"28"	"0"	"0.001999"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDATEQTDLAK"	"[K].vDATEQTDLAk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.7544"	"0.0000"	"1"	"1"	"1"	"824.96210"	"1648.91692"	"1648.91579"	"0.69"	"0.00057"	"15/102"	"15"	"102"	"276376.443908691"	"HCD"	"MS2"	"0"	"24.0"	"100.000"	"56.4207"	"17940"	"17940"	"17914"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.6"	""	"24.6"	""	"24.3"	""	"39.1"	""	"44.3"	"45.5"	""	"1154"	"57"	"37.000"	"30.000"	"0.000115924655287524"	"30"	"0"	"8.909E-05"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDATEQTDLAK"	"[K].vDATEQTDLAk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"824.96277"	"1648.91826"	"1648.91579"	"1.50"	"0.00124"	"17/102"	"17"	"102"	"277323.16027832"	"HCD"	"MS2"	"0"	"22.4"	"100.000"	"56.2435"	"17882"	"17882"	"17853"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.1"	""	"24.5"	""	"24.8"	""	"40.2"	""	"45.3"	"36.8"	""	"1143"	"66"	"37.000"	"30.000"	"1.3335712825936E-05"	""	"0"	"0.0001078"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLDPAEQYK"	"[R].eVLDPAEQYk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35397"	"Caspase-6 OS=Rattus norvegicus OX=10116 GN=Casp6 PE=2 SV=2"	"O35397"	"Caspase-6 OS=Rattus norvegicus OX=10116 GN=Casp6 PE=2 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"825.46118"	"1649.91509"	"1649.91506"	"0.02"	"0.00001"	"10/88"	"10"	"88"	"215502.355529785"	"HCD"	"MS2"	"32.53775"	"18.1"	"100.000"	"71.5407"	"24071"	"24071"	"24042"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.3"	""	"26.7"	""	"22.2"	""	"30.3"	""	"31.1"	"33.3"	""	"1038"	"24"	"37.000"	"30.000"	"0.231295592918304"	"17"	"0.0006732"	"0.009254"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLDPAEQYK"	"[R].eVLDPAEQYk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35397"	"Caspase-6 OS=Rattus norvegicus OX=10116 GN=Casp6 PE=2 SV=2"	"O35397"	"Caspase-6 OS=Rattus norvegicus OX=10116 GN=Casp6 PE=2 SV=2"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"825.46167"	"1649.91606"	"1649.91506"	"0.61"	"0.00050"	"10/88"	"10"	"88"	"194213.317199707"	"HCD"	"MS2"	"47.05104"	"16.9"	"100.000"	"71.6090"	"24085"	"24085"	"24056"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.0"	""	"17.4"	""	"17.8"	""	"28.5"	""	"30.9"	"39.3"	""	"1046"	"28"	"37.000"	"30.000"	"0.0880038533939855"	"25"	"0.0008629"	"0.01056"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEDFVDPWTVR"	"[K].aSEDFVDPWTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"3"	"3"	"0.4643"	"0.0000"	"1"	"1"	"1"	"550.94855"	"1650.83109"	"1650.83250"	"-0.86"	"-0.00047"	"14/104"	"14"	"104"	"551262.975097656"	"HCD"	"MS2"	"44.33221"	"10.6"	"100.000"	"96.6409"	"33888"	"33888"	"33884"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.1"	""	"12.2"	""	"15.0"	""	"19.9"	""	"19.5"	"22.0"	""	"833"	"28"	"36.000"	"29.000"	"0.072046851361309"	"29"	"0"	"0.000348"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEDFVDPWTVR"	"[K].aSEDFVDPWTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"550.94873"	"1650.83164"	"1650.83250"	"-0.52"	"-0.00029"	"11/104"	"11"	"104"	"501310.652099609"	"HCD"	"MS2"	"7.237733"	"7.3"	"100.000"	"96.9155"	"33985"	"33985"	"33976"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.9"	""	"10.1"	""	"11.5"	""	"12.6"	""	"13.5"	"10.5"	""	"830"	"48"	"36.000"	"29.000"	"0.000714575458619193"	"23"	"0"	"0.0002087"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEDFVDPWTVR"	"[K].aSEDFVDPWTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"825.91956"	"1650.83183"	"1650.83250"	"-0.40"	"-0.00033"	"5/104"	"5"	"104"	"126805.787231445"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"96.4907"	"33853"	"33853"	"33846"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.4"	""	"11.3"	""	"10.1"	""	"9.6"	""	"12.1"	"14.0"	""	"844"	"11"	"36.000"	"29.000"	"3.34435561462759"	"13"	"0.004069"	"0.04401"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEDFVDPWTVR"	"[K].aSEDFVDPWTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"550.94885"	"1650.83200"	"1650.83250"	"-0.30"	"-0.00017"	"12/104"	"12"	"104"	"469811.573120117"	"HCD"	"MS2"	"27.41493"	"9.3"	"100.000"	"96.6079"	"33896"	"33896"	"33891"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.6"	""	"13.0"	""	"13.0"	""	"16.3"	""	"13.3"	"16.3"	""	"852"	"17"	"36.000"	"29.000"	"0.861806170116944"	"15"	"0"	"0.003135"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEDFVDPWTVR"	"[K].aSEDFVDPWTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"825.91992"	"1650.83257"	"1650.83250"	"0.04"	"0.00003"	"8/104"	"8"	"104"	"1018567.17614746"	"HCD"	"MS2"	"0"	"40.2"	"100.000"	"96.7593"	"33951"	"33951"	"33940"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.8"	""	"58.2"	""	"61.5"	""	"55.5"	"0.0"	"65.4"	"74.0"	""	"852"	"38"	"36.000"	"29.000"	"0.00706984022568402"	"17"	"0"	"8.628E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEDFVDPWTVR"	"[K].aSEDFVDPWTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"825.92004"	"1650.83281"	"1650.83250"	"0.19"	"0.00015"	"7/104"	"7"	"104"	"241980.121643066"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"97.0516"	"34029"	"34029"	"34025"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.4"	""	"12.8"	""	"17.6"	""	"13.2"	""	"15.2"	"15.1"	""	"857"	"33"	"36.000"	"29.000"	"0.0221284414233082"	"15"	"0"	"0.0009083"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEDFVDPWTVR"	"[K].aSEDFVDPWTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"825.92010"	"1650.83293"	"1650.83250"	"0.26"	"0.00022"	"16/104"	"16"	"104"	"1036214.52539063"	"HCD"	"MS2"	"0"	"42.1"	"100.000"	"96.7959"	"33943"	"33943"	"33936"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.5"	""	"65.4"	""	"71.0"	""	"62.3"	"0.5"	"64.1"	"63.5"	""	"857"	"37"	"36.000"	"29.000"	"0.00924593479321918"	"15"	"0"	"4.924E-05"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEDFVDPWTVR"	"[K].aSEDFVDPWTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"3"	"3"	"0.8485"	"0.0000"	"1"	"1"	"1"	"550.94922"	"1650.83310"	"1650.83250"	"0.36"	"0.00020"	"13/104"	"13"	"104"	"565251.078125"	"HCD"	"MS2"	"12.63601"	"7.3"	"100.000"	"96.8665"	"33989"	"33989"	"33983"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.8"	""	"9.6"	""	"11.5"	""	"11.5"	""	"12.8"	"12.7"	""	"858"	"33"	"36.000"	"29.000"	"0.0197905239486403"	"19"	"0"	"0.0001811"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEDFVDPWTVR"	"[K].aSEDFVDPWTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.9714"	"0.0000"	"1"	"1"	"1"	"825.92023"	"1650.83318"	"1650.83250"	"0.41"	"0.00034"	"7/104"	"7"	"104"	"199289.694641113"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"97.0252"	"34040"	"34040"	"34034"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.5"	""	"11.6"	""	"13.3"	""	"17.5"	""	"12.2"	"17.6"	""	"858"	"35"	"36.000"	"29.000"	"0.0147726120297472"	"15"	"0"	"0.0005567"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEDFVDPWTVR"	"[K].aSEDFVDPWTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"825.92035"	"1650.83342"	"1650.83250"	"0.56"	"0.00046"	"6/104"	"6"	"104"	"137665.22833252"	"HCD"	"MS2"	"10.00276"	"6.0"	"100.000"	"96.5375"	"33850"	"33850"	"33840"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.9"	""	"9.5"	""	"10.0"	""	"7.6"	""	"9.9"	"9.9"	""	"846"	"27"	"36.000"	"29.000"	"0.0811596877303532"	"21"	"0.0003538"	"0.006886"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGQAVDDFIEK"	"[K].aGQAVDDFIEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"825.95898"	"1650.91069"	"1650.91031"	"0.23"	"0.00019"	"10/104"	"10"	"104"	"128561.201049805"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"83.9293"	"29047"	"29047"	"29025"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.9"	""	"13.0"	""	"11.8"	""	"15.7"	""	"14.8"	"18.3"	""	"1028"	"37"	"37.000"	"30.000"	"0.0108383486906571"	"23"	"0"	"0.002423"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGQAVDDFIEK"	"[K].aGQAVDDFIEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"550.97510"	"1650.91074"	"1650.91031"	"0.26"	"0.00014"	"9/104"	"9"	"104"	"537626.374694824"	"HCD"	"MS2"	"35.1565"	"20.3"	"100.000"	"84.1259"	"29126"	"29126"	"29113"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.8"	""	"29.4"	""	"26.9"	""	"33.0"	""	"32.2"	"38.8"	""	"1028"	"27"	"37.000"	"30.000"	"0.0918254613473954"	"22"	"0"	"0.0004316"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAEDGYSGVEVR"	"[R].eLAEDGYSGVEVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"826.91895"	"1652.83061"	"1652.83290"	"-1.38"	"-0.00114"	"7/116"	"7"	"116"	"253095.534362793"	"HCD"	"MS2"	"0"	"15.7"	"100.000"	"63.2891"	"20714"	"20714"	"20694"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.6"	""	"18.3"	""	"21.0"	""	"25.8"	""	"33.4"	"22.3"	""	"872"	"54"	"36.000"	"29.000"	"0.000159766782546455"	"22"	"0"	"9.94E-05"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAEDGYSGVEVR"	"[R].eLAEDGYSGVEVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"826.91943"	"1652.83159"	"1652.83290"	"-0.79"	"-0.00065"	"9/116"	"9"	"116"	"353814.153564453"	"HCD"	"MS2"	"0"	"21.6"	"100.000"	"63.4749"	"20775"	"20775"	"20747"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.7"	""	"32.3"	""	"29.8"	""	"35.8"	""	"39.1"	"31.8"	""	"881"	"46"	"36.000"	"29.000"	"0.00110648597307997"	"27"	"0"	"2.06E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAEDGYSGVEVR"	"[R].eLAEDGYSGVEVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.8448"	"0.0000"	"1"	"1"	"1"	"826.91998"	"1652.83269"	"1652.83290"	"-0.13"	"-0.00010"	"9/116"	"9"	"116"	"203072.644836426"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"63.7653"	"20893"	"20893"	"20875"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.6"	""	"14.2"	""	"17.9"	""	"17.5"	""	"22.3"	"17.9"	""	"878"	"58"	"36.000"	"29.000"	"7.78869182110783E-05"	"25"	"0"	"8.164E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTAEMSSILEER"	"[K].tGTAEMSSILEER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.8772"	"0.0000"	"1"	"1"	"1"	"551.61609"	"1652.83371"	"1652.83627"	"-1.54"	"-0.00085"	"16/118"	"16"	"118"	"1699261.0581665"	"HCD"	"MS2"	"19.88693"	"15.9"	"100.000"	"76.7958"	"26196"	"26196"	"26179"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.4"	""	"20.2"	""	"20.4"	"2.1"	"25.4"	"1.7"	"32.1"	"29.8"	""	"886"	"57"	"36.000"	"29.000"	"9.78146096727372E-05"	"23"	"0"	"2.863E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTAEMSSILEER"	"[K].tGTAEMSSILEER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"826.92102"	"1652.83476"	"1652.83627"	"-0.91"	"-0.00075"	"7/118"	"7"	"118"	"286315.866638184"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"76.4678"	"26063"	"26063"	"26034"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.5"	""	"25.7"	""	"24.5"	""	"23.7"	""	"46.6"	"43.1"	""	"885"	"37"	"36.000"	"29.000"	"0.00920265784043385"	"24"	"0.0006732"	"0.008949"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTAEMSSILEER"	"[K].tGTAEMSSILEER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"551.61664"	"1652.83536"	"1652.83627"	"-0.55"	"-0.00030"	"14/118"	"14"	"118"	"700903.641723633"	"HCD"	"MS2"	"19.63045"	"11.1"	"100.000"	"76.4888"	"26071"	"26071"	"26050"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.2"	""	"11.9"	""	"12.9"	""	"17.1"	"1.9"	"20.8"	"22.9"	""	"883"	"62"	"36.000"	"29.000"	"2.55229404929624E-05"	""	"0"	"5.697E-05"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTAEMSSILEER"	"[K].tGTAEMSSILEER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"551.61676"	"1652.83573"	"1652.83627"	"-0.33"	"-0.00018"	"14/118"	"14"	"118"	"1236400.46343994"	"HCD"	"MS2"	"11.40042"	"12.2"	"100.000"	"76.6376"	"26123"	"26123"	"26104"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.6"	""	"17.2"	""	"15.6"	""	"18.9"	""	"22.2"	"26.4"	""	"881"	"70"	"36.000"	"29.000"	"4.72004253957165E-06"	"29"	"0"	"4.661E-06"	"0.975"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTAEMSSILEER"	"[K].tGTAEMSSILEER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"826.92175"	"1652.83623"	"1652.83627"	"-0.02"	"-0.00002"	"11/118"	"11"	"118"	"1015298.59228516"	"HCD"	"MS2"	"0"	"57.2"	"100.000"	"76.7610"	"26181"	"26181"	"26163"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.0"	""	"68.9"	""	"75.7"	""	"78.7"	""	"125.4"	"123.9"	""	"899"	"88"	"36.000"	"29.000"	"6.89810333768283E-08"	""	"0"	"4.027E-08"	"1.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTAEMSSILEER"	"[K].tGTAEMSSILEER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"826.92181"	"1652.83635"	"1652.83627"	"0.05"	"0.00004"	"11/118"	"11"	"118"	"808294.390869141"	"HCD"	"MS2"	"0"	"45.9"	"100.000"	"76.8824"	"26221"	"26221"	"26208"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.0"	""	"60.0"	""	"54.6"	""	"58.8"	""	"106.0"	"101.4"	""	"902"	"88"	"36.000"	"29.000"	"6.60962076271116E-08"	"28"	"0"	"1.86E-08"	"1.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTAEMSSILEER"	"[K].tGTAEMSSILEER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8533"	"0.0000"	"1"	"1"	"1"	"826.92200"	"1652.83672"	"1652.83627"	"0.27"	"0.00023"	"10/118"	"10"	"118"	"349675.067687988"	"HCD"	"MS2"	"0"	"21.7"	"100.000"	"76.5707"	"26096"	"26096"	"26072"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.0"	""	"20.9"	""	"27.8"	""	"26.7"	"1.8"	"51.2"	"45.4"	""	"901"	"75"	"36.000"	"29.000"	"1.29925619215853E-06"	"29"	"0"	"6.919E-07"	"1.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAENSLVAYK"	"[K].eAAENSLVAYk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"826.96600"	"1652.92473"	"1652.92596"	"-0.74"	"-0.00061"	"9/102"	"9"	"102"	"580565.867797852"	"HCD"	"MS2"	"0"	"47.8"	"100.000"	"67.3709"	"22372"	"22372"	"22347"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.5"	""	"47.0"	""	"60.4"	""	"84.9"	"1.7"	"100.2"	"91.9"	""	"928"	"60"	"36.000"	"29.000"	"5.17032663586562E-05"	"23"	"0"	"2.479E-06"	"1.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RVEPGSPAEAAALR"	"[R].rVEPGSPAEAAALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"1"	"3"	"3"	"0.9254"	"0.0000"	"1"	"1"	"1"	"551.64691"	"1652.92618"	"1652.92813"	"-1.18"	"-0.00065"	"12/142"	"12"	"142"	"4254947.94177246"	"HCD"	"MS2"	"38.07764"	"102.0"	"100.000"	"40.7701"	"11584"	"11584"	"11562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"131.3"	""	"98.1"	""	"97.9"	""	"195.4"	"1.9"	"233.6"	"211.7"	""	"902"	"67"	"36.000"	"29.000"	"8.301881726625E-06"	"22"	"0"	"1.471E-08"	"1.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAENSLVAYK"	"[K].eAAENSLVAYk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"826.96680"	"1652.92632"	"1652.92596"	"0.22"	"0.00018"	"9/102"	"9"	"102"	"658675.744873047"	"HCD"	"MS2"	"0"	"56.0"	"100.000"	"67.5227"	"22418"	"22418"	"22401"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"85.8"	""	"58.1"	""	"61.1"	""	"96.5"	"1.0"	"112.7"	"116.7"	""	"902"	"62"	"36.000"	"29.000"	"2.8719477992947E-05"	"26"	"0"	"8.418E-07"	"1.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDALQEGDSGTYR"	"[R].lDALQEGDSGTYR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"827.41669"	"1653.82610"	"1653.82814"	"-1.24"	"-0.00102"	"12/130"	"12"	"130"	"190130.88470459"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"66.8306"	"22136"	"22136"	"22116"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.3"	""	"12.0"	""	"15.0"	""	"18.9"	""	"22.1"	"25.9"	""	"834"	"35"	"36.000"	"29.000"	"0.0146938653224717"	"18"	"0"	"0.0006"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDALQEGDSGTYR"	"[R].lDALQEGDSGTYR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"551.94702"	"1653.82651"	"1653.82814"	"-0.99"	"-0.00054"	"9/130"	"9"	"130"	"402923.127502441"	"HCD"	"MS2"	"35.24736"	"14.4"	"100.000"	"66.8119"	"22129"	"22129"	"22100"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.1"	""	"20.5"	""	"18.5"	""	"24.4"	""	"27.8"	"27.7"	""	"853"	"20"	"36.000"	"29.000"	"0.436434461207742"	"20"	"0.0003538"	"0.006502"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDALQEGDSGTYR"	"[R].lDALQEGDSGTYR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"551.94727"	"1653.82724"	"1653.82814"	"-0.54"	"-0.00030"	"11/130"	"11"	"130"	"497557.026977539"	"HCD"	"MS2"	"27.98851"	"15.8"	"100.000"	"66.6356"	"22072"	"22072"	"22045"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.4"	""	"16.7"	""	"22.2"	""	"27.4"	""	"36.3"	"28.8"	""	"844"	"30"	"36.000"	"29.000"	"0.0450103563159169"	"21"	"0"	"0.002346"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDALQEGDSGTYR"	"[R].lDALQEGDSGTYR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"827.41803"	"1653.82878"	"1653.82814"	"0.39"	"0.00032"	"8/130"	"8"	"130"	"351073.22845459"	"HCD"	"MS2"	"35.31296"	"25.0"	"100.000"	"66.4766"	"22007"	"22007"	"21981"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.5"	""	"24.8"	""	"35.3"	""	"42.0"	""	"46.2"	"52.6"	""	"857"	"45"	"36.000"	"29.000"	"0.00140265487755582"	"21"	"0"	"7.298E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDALQEGDSGTYR"	"[R].lDALQEGDSGTYR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.41821"	"1653.82915"	"1653.82814"	"0.61"	"0.00050"	"6/130"	"6"	"130"	"306877.285766602"	"HCD"	"MS2"	"41.3218"	"23.2"	"100.000"	"66.5401"	"22018"	"22018"	"21989"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.9"	""	"26.1"	""	"28.7"	""	"42.0"	""	"45.8"	"46.1"	""	"860"	"15"	"36.000"	"29.000"	"1.3660558503794"	"13"	"0.0002479"	"0.005864"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAENSLVAYK"	"[K].eAAEnSLVAYk.[A]"	"N-Term(TMT6plex); N5(Deamidated); K11(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"827.45813"	"1653.90898"	"1653.90997"	"-0.60"	"-0.00050"	"9/102"	"9"	"102"	"200171.552062988"	"HCD"	"MS2"	"100"	"17.3"	"100.000"	"66.5032"	"22003"	"22003"	"21973"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.6"	""	"21.9"	""	"19.1"	""	"35.9"	""	"36.0"	"30.8"	""	"988"	"5"	"36.000"	"29.000"	"14.181656075202"	"16"	"0.005921"	"0.06782"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDGSWEVIEGYR"	"[R].dDGSWEVIEGYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.9107"	"0.0000"	"1"	"1"	"1"	"827.89874"	"1654.79021"	"1654.79103"	"-0.50"	"-0.00041"	"9/104"	"9"	"104"	"703255.485961914"	"HCD"	"MS2"	"0"	"38.4"	"100.000"	"89.4348"	"31198"	"31198"	"31185"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"62.9"	""	"49.1"	""	"35.0"	""	"67.5"	""	"72.0"	"78.0"	""	"546"	"56"	"34.000"	"27.000"	"7.46728362281731E-05"	"21"	"0"	"1.918E-06"	"1.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDGSWEVIEGYR"	"[R].dDGSWEVIEGYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"827.89929"	"1654.79131"	"1654.79103"	"0.17"	"0.00014"	"6/104"	"6"	"104"	"267691.702453613"	"HCD"	"MS2"	"0"	"15.2"	"100.000"	"89.3474"	"31164"	"31164"	"31154"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.3"	""	"18.0"	""	"13.0"	""	"31.6"	""	"30.2"	"29.4"	""	"563"	"27"	"34.000"	"27.000"	"0.0576074165237995"	"18"	"0"	"0.000368"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THEDILENLDAR"	"[K].tHEDILENLDAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"552.29083"	"1654.85794"	"1654.85978"	"-1.11"	"-0.00061"	"7/114"	"7"	"114"	"2817327.2166748"	"HCD"	"MS2"	"2.717049"	"27.3"	"100.000"	"61.1092"	"19816"	"19816"	"19798"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.8"	""	"28.6"	""	"43.2"	""	"40.0"	"1.0"	"52.7"	"47.2"	""	"916"	"60"	"36.000"	"29.000"	"4.87377502346737E-05"	"25"	"0"	"8.102E-06"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THEDILENLDAR"	"[K].tHEDILENLDAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"552.29114"	"1654.85886"	"1654.85978"	"-0.56"	"-0.00031"	"7/114"	"7"	"114"	"2693702.60430908"	"HCD"	"MS2"	"3.459054"	"24.5"	"100.000"	"60.9234"	"19756"	"19756"	"19737"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.6"	""	"30.2"	""	"36.6"	""	"36.1"	"1.4"	"42.5"	"43.9"	""	"920"	"70"	"36.000"	"29.000"	"4.86136054238282E-06"	"27"	"0"	"2.796E-06"	"1.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"THEDILENLDAR"	"[K].tHEDILENLDAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"3"	"3"	"0.0435"	"0.0000"	"1"	"1"	"1"	"552.29138"	"1654.85959"	"1654.85978"	"-0.11"	"-0.00006"	"12/114"	"12"	"114"	"1400861.95446777"	"HCD"	"MS2"	"15.58367"	"22.1"	"100.000"	"61.2252"	"19879"	"19879"	"19857"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.2"	""	"27.1"	""	"30.9"	""	"31.1"	""	"47.0"	"42.4"	""	"935"	"23"	"36.000"	"29.000"	"0.211242653995276"	""	"0"	"0.001502"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"EIVQDGDHMIIR"	"[K].eIVQDGDHMIIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P02696"	"Retinol-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Rbp1 PE=1 SV=2"	"P02696"	"Retinol-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Rbp1 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0435"	"2"	"2"	"2"	"552.29138"	"1654.85959"	"1654.87841"	"-11.37"	"-0.00627"	"15/116"	"15"	"116"	"1400861.95446777"	"HCD"	"MS2"	"15.58367"	"22.1"	"100.000"	"61.2252"	"19879"	"19879"	"19857"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.2"	""	"27.1"	""	"30.9"	""	"31.1"	""	"47.0"	"42.4"	""	"935"	"22"	"36.000"	"29.000"	"0.327176133131063"	""	"0.0008629"	"0.01102"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"EIVQDGDHMIIR"	"[K].eIVQDGDHMIIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P02696"	"Retinol-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Rbp1 PE=1 SV=2"	"P02696"	"Retinol-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Rbp1 PE=1 SV=2"	"0"	"3"	"3"	"0.0303"	"0.0000"	"1"	"1"	"1"	"552.29187"	"1654.86106"	"1654.87841"	"-10.48"	"-0.00578"	"15/116"	"15"	"116"	"1461180.98376465"	"HCD"	"MS2"	"17.42033"	"26.6"	"100.000"	"61.4203"	"19943"	"19943"	"19921"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.3"	""	"33.0"	""	"35.1"	""	"42.5"	"0.8"	"47.4"	"52.0"	""	"935"	"33"	"36.000"	"29.000"	"0.0250484937387487"	"18"	"0"	"0.002607"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"THEDILENLDAR"	"[K].tHEDILENLDAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"3"	"3"	""	"0.0303"	"2"	"2"	"2"	"552.29187"	"1654.86106"	"1654.85978"	"0.77"	"0.00043"	"7/114"	"7"	"114"	"1461180.98376465"	"HCD"	"MS2"	"17.42033"	"26.6"	"100.000"	"61.4203"	"19943"	"19943"	"19921"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.3"	""	"33.0"	""	"35.1"	""	"42.5"	"0.8"	"47.4"	"52.0"	""	"935"	"32"	"36.000"	"29.000"	"0.0323430978904603"	"18"	"0"	"0.0001136"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAELSEEDLK"	"[R].yAELSEEDLk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q1HCL7"	"NAD kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nadk2 PE=1 SV=1"	"Q1HCL7"	"NAD kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nadk2 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"827.95001"	"1654.89275"	"1654.89399"	"-0.75"	"-0.00062"	"8/82"	"8"	"82"	"127962.578918457"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"77.2352"	"26364"	"26364"	"26339"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.8"	""	"16.7"	""	"14.6"	""	"12.2"	""	"20.5"	"16.1"	""	"1020"	"14"	"37.000"	"30.000"	"1.87745776557691"	"16"	"0.008478"	"0.1039"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGLYYVDDNGTR"	"[K].gPGLYYVDDNGTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"0"	"2"	"2"	"0.4722"	"0.0000"	"1"	"1"	"1"	"828.41382"	"1655.82036"	"1655.82267"	"-1.39"	"-0.00115"	"7/110"	"7"	"110"	"803002.368164063"	"HCD"	"MS2"	"49.38369"	"54.5"	"100.000"	"63.6508"	"20861"	"20861"	"20843"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"96.8"	""	"75.4"	""	"82.4"	""	"85.2"	""	"90.2"	"87.9"	""	"734"	"36"	"35.000"	"28.000"	"0.00996933211663944"	""	"0"	"0.0003311"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GPGLYYVDDNGTR"	"[K].gPGLYYVDDNGTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"828.41425"	"1655.82121"	"1655.82267"	"-0.88"	"-0.00073"	"7/110"	"7"	"110"	"261218.329467773"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"62.9452"	"20559"	"20559"	"20537"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.1"	""	"17.4"	""	"16.0"	""	"25.7"	""	"27.9"	"32.0"	""	"732"	"34"	"35.000"	"28.000"	"0.0132276009726098"	"15"	"0"	"0.002517"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"GPGLYYVDSEGNR"	"[].gPGLYYVDSEGNR.[]"	"N-Term(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"828.41425"	"1655.82121"	"1655.82267"	"-0.88"	"-0.00073"	"7/102"	"7"	"102"	"261218.329467773"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"62.9452"	"20559"	"20559"	"20537"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.1"	""	"17.4"	""	"16.0"	""	"25.7"	""	"27.9"	"32.0"	""	"732"	"34"	"35.000"	"28.000"	"0.0151523880984021"	"15"	"0"	"0.002111"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGLYYVDDNGTR"	"[K].gPGLYYVDDNGTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"828.41528"	"1655.82329"	"1655.82267"	"0.38"	"0.00031"	"11/110"	"11"	"110"	"513834.030395508"	"HCD"	"MS2"	"0"	"37.3"	"100.000"	"63.8068"	"20910"	"20910"	"20888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.5"	""	"48.7"	""	"66.1"	""	"55.6"	""	"59.6"	"58.1"	""	"752"	"25"	"35.000"	"28.000"	"0.109948129406909"	"23"	"0.0002479"	"0.006084"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGLYYVDDNGTR"	"[K].gPGLYYVDDnGTR.[L]"	"N-Term(TMT6plex); N10(Deamidated)"	"1"	"1"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"828.90533"	"1656.80339"	"1656.80668"	"-1.99"	"-0.00164"	"8/110"	"8"	"110"	"185582.161376953"	"HCD"	"MS2"	"0"	"14.4"	"100.000"	"67.1841"	"22296"	"22296"	"22268"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.5"	""	"15.8"	""	"22.2"	""	"25.0"	"1.4"	"22.9"	"28.4"	""	"603"	"14"	"34.000"	"27.000"	"1.20306008062186"	"14"	"0.001886"	"0.02151"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAPLVEFEEEEV"	"[R].hAPLVEFEEEEV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"828.91913"	"1656.83098"	"1656.83183"	"-0.51"	"-0.00043"	"5/100"	"5"	"100"	"147343.829589844"	"HCD"	"MS2"	"0"	"2.3"	"100.000"	"86.7682"	"30162"	"30162"	"30145"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.1"	""	"2.2"	""	""	""	"3.9"	""	"4.5"	"7.1"	""	"711"	"20"	"35.000"	"28.000"	"0.361276410315532"	"19"	"0.004867"	"0.05203"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAPLVEFEEEEV"	"[R].hAPLVEFEEEEV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"828.91925"	"1656.83122"	"1656.83183"	"-0.37"	"-0.00030"	"4/100"	"4"	"100"	"103625.495605469"	"HCD"	"MS2"	"0"	"1.4"	"100.000"	"86.4667"	"30045"	"30045"	"30033"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	"3.0"	""	"2.4"	""	"4.9"	"2.9"	""	"722"	"16"	"35.000"	"28.000"	"0.815656313049772"	"17"	"0.006958"	"0.08076"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAPLVEFEEEEV"	"[R].hAPLVEFEEEEV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"828.91943"	"1656.83159"	"1656.83183"	"-0.15"	"-0.00012"	"5/100"	"5"	"100"	"115961.56854248"	"HCD"	"MS2"	"0"	"1.9"	"100.000"	"86.8167"	"30185"	"30185"	"30167"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.4"	""	"2.4"	""	""	""	"5.0"	""	"3.2"	"4.2"	""	"720"	"25"	"35.000"	"28.000"	"0.102165085023896"	"14"	"0.00736"	"0.08797"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSYVGDEAQSK"	"[K].dSYVGDEAQSk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7455"	"0.0000"	"1"	"1"	"1"	"552.95398"	"1656.84739"	"1656.84810"	"-0.43"	"-0.00024"	"8/102"	"8"	"102"	"12694849.7596436"	"HCD"	"MS2"	"12.26338"	"343.0"	"100.000"	"43.1490"	"12542"	"12542"	"12524"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"595.3"	""	"354.4"	""	"370.5"	""	"601.6"	""	"680.6"	"650.9"	""	"822"	"55"	"36.000"	"29.000"	"0.000118806943165221"	""	"0"	"7.343E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSYVGDEAQSK"	"[K].dSYVGDEAQSk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7885"	"0.0000"	"1"	"1"	"1"	"552.95404"	"1656.84757"	"1656.84810"	"-0.32"	"-0.00018"	"8/102"	"8"	"102"	"12356916.3841553"	"HCD"	"MS2"	"15.77295"	"310.4"	"100.000"	"43.0179"	"12500"	"12500"	"12483"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"535.3"	""	"323.8"	""	"308.2"	""	"566.1"	""	"601.1"	"611.1"	""	"816"	"52"	"36.000"	"29.000"	"0.000286193761755348"	"27"	"0"	"0.0001264"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSYVGDEAQSK"	"[K].dSYVGDEAQSk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9077"	"0.0000"	"1"	"1"	"1"	"828.92743"	"1656.84758"	"1656.84810"	"-0.31"	"-0.00026"	"9/102"	"9"	"102"	"4118330.5657959"	"HCD"	"MS2"	"0"	"324.4"	"100.000"	"43.0246"	"12502"	"12502"	"12483"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"602.3"	""	"313.7"	""	"314.3"	""	"592.4"	""	"630.1"	"623.7"	""	"816"	"65"	"36.000"	"29.000"	"1.43767315385335E-05"	"22"	"0"	"3.271E-06"	"1.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSYVGDEAQSK"	"[K].dSYVGDEAQSk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"828.92749"	"1656.84770"	"1656.84810"	"-0.24"	"-0.00020"	"10/102"	"10"	"102"	"208960.154418945"	"HCD"	"MS2"	"100"	"21.3"	"100.000"	"43.6396"	"12752"	"12752"	"12734"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.8"	""	"23.5"	""	"24.3"	""	"41.0"	""	"33.2"	"49.7"	""	"819"	"15"	"36.000"	"29.000"	"1.23382596690422"	"19"	"0"	"0.00334"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSYVGDEAQSK"	"[K].dSYVGDEAQSk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9194"	"0.0000"	"1"	"1"	"1"	"828.92755"	"1656.84783"	"1656.84810"	"-0.17"	"-0.00014"	"9/102"	"9"	"102"	"4315433.37579346"	"HCD"	"MS2"	"0"	"346.7"	"100.000"	"43.4180"	"12652"	"12652"	"12634"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"621.6"	""	"314.4"	""	"371.7"	""	"511.7"	""	"715.9"	"759.1"	""	"819"	"62"	"36.000"	"29.000"	"2.40023578368495E-05"	"22"	"0"	"7.334E-06"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSYVGDEAQSK"	"[K].dSYVGDEAQSk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9221"	"0.0000"	"1"	"1"	"1"	"828.92780"	"1656.84831"	"1656.84810"	"0.13"	"0.00011"	"10/102"	"10"	"102"	"2648593.75396729"	"HCD"	"MS2"	"0"	"213.5"	"100.000"	"43.3278"	"12626"	"12626"	"12607"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"360.9"	""	"209.2"	""	"236.3"	""	"342.2"	"0.9"	"426.6"	"449.8"	""	"811"	"77"	"36.000"	"29.000"	"9.01552160659145E-07"	"23"	"0"	"2.327E-06"	"1.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSYVGDEAQSK"	"[K].dSYVGDEAQSk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"552.95435"	"1656.84848"	"1656.84810"	"0.23"	"0.00013"	"8/102"	"8"	"102"	"10850576.5874023"	"HCD"	"MS2"	"6.489748"	"203.2"	"69.610"	"43.3211"	"12624"	"12624"	"12607"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"330.4"	""	"207.8"	""	"228.1"	""	"306.9"	"2.1"	"421.2"	"432.0"	""	"813"	"52"	"36.000"	"29.000"	"0.000281877590145735"	"28"	"0"	"0.0001402"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSYVGDEAQSK"	"[K].dSYVGDEAQSk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9104"	"0.0000"	"1"	"1"	"1"	"828.92798"	"1656.84868"	"1656.84810"	"0.35"	"0.00029"	"9/102"	"9"	"102"	"2949661.31744385"	"HCD"	"MS2"	"0"	"247.0"	"100.000"	"43.1192"	"12530"	"12530"	"12508"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"440.1"	""	"254.0"	""	"226.3"	""	"485.9"	""	"453.5"	"484.0"	""	"812"	"67"	"36.000"	"29.000"	"8.74029384298095E-06"	"23"	"0"	"7.526E-06"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSYVGDEAQSK"	"[K].dSYVGDEAQSk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7708"	"0.0000"	"1"	"1"	"1"	"552.95453"	"1656.84903"	"1656.84810"	"0.56"	"0.00031"	"8/102"	"8"	"102"	"9395748.67425537"	"HCD"	"MS2"	"8.467064"	"202.3"	"78.374"	"43.4570"	"12668"	"12668"	"12650"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"326.1"	""	"207.7"	""	"233.6"	""	"321.9"	""	"408.9"	"423.9"	""	"812"	"48"	"36.000"	"29.000"	"0.000628819547278467"	"27"	"0"	"0.0002276"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSYVGDEAQSK"	"[K].dSYVGDEAQSk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"828.92834"	"1656.84941"	"1656.84810"	"0.79"	"0.00066"	"6/102"	"6"	"102"	"142844.146850586"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"43.9107"	"12851"	"12851"	"12824"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.1"	""	"15.5"	""	"7.5"	""	"14.4"	""	"25.6"	"23.8"	""	"803"	"29"	"36.000"	"29.000"	"0.0513671593619246"	"21"	"0.000936"	"0.01167"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSYVGDEAQSK"	"[K].dSYVGDEAQSk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"552.95477"	"1656.84977"	"1656.84810"	"1.00"	"0.00055"	"8/102"	"8"	"102"	"1100834.14123535"	"HCD"	"MS2"	"57.45232"	"51.2"	"100.000"	"43.7564"	"12799"	"12799"	"12776"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.4"	""	"59.4"	""	"58.1"	""	"85.1"	""	"118.4"	"102.4"	""	"809"	"40"	"36.000"	"29.000"	"0.00394383308456683"	"27"	"0"	"0.0008541"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGRPLEMIEPR"	"[K].vnGRPLEmIEPR.[T]"	"N-Term(TMT6plex); N2(Deamidated); M8(Oxidation)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"552.96924"	"1656.89316"	"1656.89406"	"-0.54"	"-0.00030"	"7/114"	"7"	"114"	"1016471.67614746"	"HCD"	"MS2"	"8.552581"	"33.3"	"100.000"	"54.5047"	"17173"	"17173"	"17145"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.9"	""	"32.5"	""	"48.2"	""	"67.5"	"2.9"	"62.8"	"58.4"	""	"981"	"9"	"36.000"	"29.000"	"6.18926405716724"	"13"	"0.006129"	"0.06974"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGRPLEMIEPR"	"[K].vnGRPLEmIEPR.[T]"	"N-Term(TMT6plex); N2(Deamidated); M8(Oxidation)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"552.96979"	"1656.89481"	"1656.89406"	"0.45"	"0.00025"	"11/114"	"11"	"114"	"2293718.57427979"	"HCD"	"MS2"	"27.08434"	"54.1"	"100.000"	"55.6860"	"17640"	"17640"	"17618"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.8"	""	"59.5"	""	"64.5"	""	"134.5"	"0.6"	"100.6"	"84.9"	""	"1000"	"18"	"36.000"	"30.000"	"0.851079254197475"	"14"	"0.0003538"	"0.00736"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEYQMSLEPIR"	"[R].fEYQmSLEPIR.[Q]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"829.42645"	"1657.84563"	"1657.84571"	"-0.05"	"-0.00004"	"6/106"	"6"	"106"	"97946.6010131836"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"83.6589"	"28939"	"28939"	"28925"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.6"	""	"6.9"	""	"3.6"	""	"15.4"	""	"11.1"	"13.2"	""	"784"	"12"	"35.000"	"28.000"	"2.24019625575372"	"19"	"0.006739"	"0.0763"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYIIGELHPDDR"	"[K].tYIIGELHPDDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"553.29620"	"1657.87406"	"1657.87470"	"-0.39"	"-0.00021"	"10/108"	"10"	"108"	"2693772.6640625"	"HCD"	"MS2"	"10.32639"	"33.5"	"100.000"	"68.3904"	"22786"	"22786"	"22767"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.5"	""	"40.4"	""	"42.7"	""	"58.8"	""	"60.9"	"64.2"	""	"933"	"56"	"36.000"	"29.000"	"0.000125849544523556"	"18"	"0"	"5.981E-06"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYIIGELHPDDR"	"[K].tYIIGELHPDDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"553.29626"	"1657.87424"	"1657.87470"	"-0.28"	"-0.00015"	"14/108"	"14"	"108"	"3323154.45709229"	"HCD"	"MS2"	"7.401239"	"38.0"	"100.000"	"68.6972"	"22912"	"22912"	"22895"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.9"	""	"44.7"	""	"44.8"	""	"66.5"	""	"69.2"	"77.8"	""	"934"	"60"	"36.000"	"29.000"	"4.84525770187012E-05"	"16"	"0"	"1.17E-05"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYIIGELHPDDR"	"[K].tYIIGELHPDDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"3"	"3"	"0.9787"	"0.0000"	"1"	"1"	"1"	"553.29633"	"1657.87442"	"1657.87470"	"-0.17"	"-0.00009"	"12/108"	"12"	"108"	"2480675.78515625"	"HCD"	"MS2"	"11.02133"	"32.6"	"100.000"	"68.5647"	"22843"	"22843"	"22821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.3"	""	"39.8"	""	"42.1"	""	"52.9"	""	"64.0"	"69.7"	""	"934"	"47"	"36.000"	"29.000"	"0.00102403990480866"	"17"	"0"	"1.917E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYIIGELHPDDR"	"[K].tYIIGELHPDDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"553.29651"	"1657.87497"	"1657.87470"	"0.16"	"0.00009"	"14/108"	"14"	"108"	"3035080.03033447"	"HCD"	"MS2"	"8.296429"	"35.5"	"100.000"	"68.8691"	"22967"	"22967"	"22949"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.1"	"2.0"	"47.3"	""	"48.4"	""	"51.5"	"1.4"	"67.3"	"69.5"	""	"918"	"55"	"36.000"	"29.000"	"0.0001367139041108"	"16"	"0"	"5.862E-06"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAETMYQIK"	"[R].aEAETmYQIk.[Y]"	"N-Term(TMT6plex); M6(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"829.44586"	"1657.88445"	"1657.88713"	"-1.62"	"-0.00134"	"7/82"	"7"	"82"	"127067.749267578"	"HCD"	"MS2"	"26.3963"	"8.5"	"100.000"	"54.6315"	"17212"	"17212"	"17184"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.8"	""	"7.1"	""	"11.8"	""	"16.5"	""	"15.3"	"20.0"	""	"947"	"26"	"36.000"	"29.000"	"0.120592412459902"	"15"	"0.001374"	"0.01669"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETQTPVTAQPK"	"[K].eTQTPVTAQPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"829.47974"	"1657.95220"	"1657.95251"	"-0.19"	"-0.00016"	"8/108"	"8"	"108"	"196681.092590332"	"HCD"	"MS2"	"0"	"13.9"	"100.000"	"39.8272"	"11200"	"11200"	"11172"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.3"	""	"12.6"	""	"17.2"	""	"22.2"	"1.7"	"29.6"	"29.1"	""	"875"	"43"	"36.000"	"29.000"	"0.00212313718820928"	"29"	"0.0001301"	"0.004952"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIADFRDDPDPR"	"[K].lIADFRDDPDPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"1"	"3"	"3"	"0.0625"	"0.0000"	"1"	"1"	"1"	"553.62756"	"1658.86814"	"1658.86995"	"-1.09"	"-0.00060"	"5/112"	"5"	"112"	"1007689.33605957"	"HCD"	"MS2"	"10.59822"	"26.4"	"100.000"	"69.2411"	"23133"	"23133"	"23116"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.0"	""	"48.7"	""	"39.1"	""	"35.2"	""	"31.5"	"48.5"	""	"890"	"16"	"36.000"	"29.000"	"1.18402265161047"	"23"	"0.003449"	"0.03527"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LIADFRDDPDPR"	"[K].lIADFRDDPDPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"553.62793"	"1658.86924"	"1658.86995"	"-0.43"	"-0.00024"	"5/112"	"5"	"112"	"716505.985534668"	"HCD"	"MS2"	"19.03417"	"23.1"	"100.000"	"69.4291"	"23196"	"23196"	"23171"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.5"	""	"38.4"	""	"38.4"	""	"24.0"	""	"31.1"	"41.2"	""	"907"	"15"	"36.000"	"29.000"	"1.29293678431302"	"26"	"0.005921"	"0.06825"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIEDTEDWRPR"	"[R].lIEDTEDWRPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"0"	"3"	"3"	"0.7674"	"0.0000"	"1"	"1"	"1"	"553.62799"	"1658.86942"	"1658.86995"	"-0.32"	"-0.00018"	"7/92"	"7"	"92"	"1002726.19165039"	"HCD"	"MS2"	"21.69607"	"32.5"	"100.000"	"73.9679"	"25044"	"25044"	"25024"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.1"	""	"30.7"	""	"36.0"	""	"66.0"	""	"69.5"	"71.6"	""	"911"	"43"	"36.000"	"29.000"	"0.0023468664760699"	"26"	"0"	"7.849E-05"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIADFRDDPDPR"	"[K].lIADFRDDPDPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"1"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"553.62799"	"1658.86942"	"1658.86995"	"-0.32"	"-0.00018"	"5/112"	"5"	"112"	"3055295.38793945"	"HCD"	"MS2"	"16.15305"	"63.0"	"100.000"	"68.9417"	"23011"	"23011"	"22991"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"142.8"	""	"104.8"	""	"106.5"	""	"71.7"	""	"69.3"	"98.6"	""	"911"	"12"	"36.000"	"29.000"	"2.64538192180958"	"18"	"0.000936"	"0.01221"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIEDTEDWRPR"	"[R].lIEDTEDWRPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"553.62805"	"1658.86960"	"1658.86995"	"-0.21"	"-0.00012"	"7/92"	"7"	"92"	"1003825.95300293"	"HCD"	"MS2"	"22.12371"	"30.1"	"100.000"	"73.8348"	"25003"	"25003"	"24984"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.2"	""	"27.7"	""	"36.8"	""	"59.2"	""	"61.0"	"62.0"	""	"909"	"36"	"36.000"	"29.000"	"0.0125468263565215"	"26"	"0"	"0.0004285"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LIADFRDDPDPR"	"[K].lIADFRDDPDPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"553.62860"	"1658.87125"	"1658.86995"	"0.78"	"0.00043"	"5/112"	"5"	"112"	"3179398.6105957"	"HCD"	"MS2"	"16.92261"	"68.2"	"100.000"	"69.1134"	"23067"	"23067"	"23044"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"161.7"	""	"109.9"	""	"106.3"	""	"81.3"	"0.1"	"73.3"	"109.8"	""	"894"	"13"	"36.000"	"29.000"	"2.07160773122121"	"18"	"0.002937"	"0.02753"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"829.94214"	"1658.87700"	"1658.87985"	"-1.72"	"-0.00142"	"6/116"	"6"	"116"	"143576.021972656"	"HCD"	"MS2"	"16.6514"	"7.7"	"100.000"	"70.1920"	"23507"	"23507"	"23477"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.3"	""	"9.6"	""	"11.2"	""	"10.9"	""	"13.7"	"9.9"	""	"916"	"37"	"36.000"	"29.000"	"0.00850874440431997"	"16"	"0"	"0.003787"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"3"	"3"	"0.9107"	"0.0000"	"1"	"1"	"1"	"553.63098"	"1658.87839"	"1658.87985"	"-0.88"	"-0.00048"	"14/116"	"14"	"116"	"1321110.56665039"	"HCD"	"MS2"	"6.805027"	"15.1"	"100.000"	"73.2448"	"24763"	"24763"	"24743"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.4"	""	"21.9"	""	"25.7"	""	"22.1"	"1.6"	"25.6"	"23.4"	""	"946"	"56"	"36.000"	"29.000"	"0.00012908064912682"	"21"	"0"	"1.104E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"3"	"3"	"0.9535"	"0.0000"	"1"	"1"	"1"	"553.63098"	"1658.87839"	"1658.87985"	"-0.88"	"-0.00048"	"14/116"	"14"	"116"	"1352625.69299316"	"HCD"	"MS2"	"48.80676"	"19.8"	"100.000"	"72.9169"	"24631"	"24631"	"24609"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.1"	""	"23.8"	""	"25.8"	""	"37.7"	""	"35.9"	"37.4"	""	"946"	"43"	"36.000"	"29.000"	"0.00236516335044111"	"18"	"0"	"2.087E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"2"	"2"	"0.9787"	"0.0000"	"1"	"1"	"1"	"829.94293"	"1658.87859"	"1658.87985"	"-0.76"	"-0.00063"	"10/116"	"10"	"116"	"114875.053100586"	"HCD"	"MS2"	"14.07751"	"6.9"	"100.000"	"69.9781"	"23434"	"23434"	"23406"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.6"	""	"9.8"	""	"12.6"	""	"9.2"	""	"10.4"	"7.6"	""	"946"	"47"	"36.000"	"29.000"	"0.00100198481697254"	"16"	"0"	"0.0006262"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"829.94299"	"1658.87871"	"1658.87985"	"-0.68"	"-0.00057"	"8/116"	"8"	"116"	"91521.6320800781"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"73.6471"	"24914"	"24914"	"24891"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.9"	""	"9.8"	""	"8.6"	""	"9.1"	""	"7.0"	"4.0"	""	"947"	"15"	"36.000"	"29.000"	"1.53221596556179"	"22"	"0.001465"	"0.01846"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"829.94305"	"1658.87883"	"1658.87985"	"-0.61"	"-0.00051"	"12/116"	"12"	"116"	"184083.088562012"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"73.4358"	"24841"	"24841"	"24823"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.7"	""	"12.4"	""	"18.1"	""	"14.9"	""	"13.5"	"10.6"	""	"942"	"29"	"36.000"	"29.000"	"0.0606765538847466"	"15"	"0"	"0.0006901"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"2"	"2"	"0.9123"	"0.0000"	"1"	"1"	"1"	"829.94312"	"1658.87895"	"1658.87985"	"-0.54"	"-0.00045"	"10/116"	"10"	"116"	"540192.790649414"	"HCD"	"MS2"	"0"	"21.7"	"100.000"	"73.0360"	"24666"	"24666"	"24638"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.1"	""	"39.9"	""	"32.4"	""	"42.4"	""	"28.5"	"20.0"	""	"940"	"57"	"36.000"	"29.000"	"0.000102588305856621"	"21"	"0"	"1.581E-05"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"553.63129"	"1658.87931"	"1658.87985"	"-0.33"	"-0.00018"	"13/116"	"13"	"116"	"555987.343261719"	"HCD"	"MS2"	"3.318885"	"11.1"	"100.000"	"73.4972"	"24853"	"24853"	"24827"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.3"	""	"17.8"	""	"17.3"	""	"17.0"	"1.3"	"14.5"	"23.1"	""	"942"	"43"	"36.000"	"29.000"	"0.00261228710803176"	"19"	"0"	"0.0001183"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"829.94348"	"1658.87969"	"1658.87985"	"-0.10"	"-0.00008"	"12/116"	"12"	"116"	"345745.81640625"	"HCD"	"MS2"	"0"	"14.5"	"100.000"	"72.8478"	"24603"	"24603"	"24577"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.1"	""	"24.7"	""	"25.4"	""	"25.7"	""	"19.0"	"14.2"	""	"941"	"37"	"36.000"	"29.000"	"0.00989827755910127"	"17"	"0"	"0.0004481"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"553.63147"	"1658.87986"	"1658.87985"	"0.01"	"0.00000"	"13/116"	"13"	"116"	"1793538.58758545"	"HCD"	"MS2"	"22.80761"	"20.2"	"100.000"	"73.1308"	"24704"	"24704"	"24686"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.5"	""	"24.4"	""	"33.3"	""	"34.5"	""	"36.9"	"33.2"	""	"940"	"50"	"36.000"	"29.000"	"0.000527348673521923"	"20"	"0"	"6.377E-06"	"0.945"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"829.94360"	"1658.87993"	"1658.87985"	"0.05"	"0.00004"	"17/116"	"17"	"116"	"2253290.20654297"	"HCD"	"MS2"	"0"	"79.1"	"100.000"	"73.1269"	"24716"	"24716"	"24702"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"154.5"	""	"134.9"	""	"149.3"	""	"127.4"	"1.1"	"102.6"	"74.8"	""	"940"	"54"	"36.000"	"29.000"	"0.0001726226812341"	"22"	"0"	"3.63E-06"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"829.94366"	"1658.88005"	"1658.87985"	"0.12"	"0.00010"	"11/116"	"11"	"116"	"1642117.35638428"	"HCD"	"MS2"	"0"	"57.2"	"100.000"	"73.3242"	"24782"	"24782"	"24768"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"106.6"	""	"104.1"	""	"113.7"	""	"92.2"	""	"72.0"	"51.2"	""	"937"	"52"	"36.000"	"29.000"	"0.000307404057262911"	"22"	"0"	"6.219E-05"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADTPSLGEGPEK"	"[K].aDTPSLGEGPEk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"2"	"2"	"0.4857"	"0.0000"	"1"	"1"	"1"	"829.95148"	"1658.89568"	"1658.90014"	"-2.69"	"-0.00223"	"12/106"	"12"	"106"	"281493.046203613"	"HCD"	"MS2"	"0"	"23.8"	"100.000"	"54.5440"	"17189"	"17189"	"17161"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.1"	""	"31.0"	""	"32.1"	""	"37.0"	"1.3"	"45.2"	"48.3"	""	"1003"	"35"	"37.000"	"30.000"	"0.0161908980203889"	""	"0.0006732"	"0.00831"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADTPSLGEGPEK"	"[K].aDTPSLGEGPEk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"3"	"3"	"0.6585"	"0.0000"	"1"	"1"	"1"	"553.63690"	"1658.89615"	"1658.90014"	"-2.40"	"-0.00133"	"11/106"	"11"	"106"	"1288106.55633545"	"HCD"	"MS2"	"25.66489"	"43.6"	"100.000"	"55.0097"	"17364"	"17364"	"17346"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.3"	""	"51.4"	""	"51.4"	""	"79.4"	""	"77.5"	"86.9"	""	"997"	"41"	"36.000"	"29.000"	"0.00353724517329749"	"29"	"0.000936"	"0.01164"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADTPSLGEGPEK"	"[K].aDTPSLGEGPEk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"2"	"2"	"0.8361"	"0.0000"	"1"	"1"	"1"	"829.95251"	"1658.89775"	"1658.90014"	"-1.44"	"-0.00119"	"9/106"	"9"	"106"	"339611.118530273"	"HCD"	"MS2"	"0"	"30.9"	"100.000"	"54.8906"	"17317"	"17317"	"17296"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.2"	""	"43.7"	""	"35.8"	""	"55.8"	""	"64.0"	"58.4"	""	"992"	"61"	"36.000"	"29.000"	"3.71947527828898E-05"	"27"	"0"	"0.0001427"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADTPSLGEGPEK"	"[K].aDTPSLGEGPEk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"3"	"3"	"0.4348"	"0.0000"	"1"	"1"	"1"	"553.63770"	"1658.89853"	"1658.90014"	"-0.97"	"-0.00053"	"9/106"	"9"	"106"	"899998.368103027"	"HCD"	"MS2"	"18.56844"	"41.1"	"100.000"	"54.8739"	"17323"	"17323"	"17300"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.7"	""	"45.1"	""	"50.4"	""	"65.6"	""	"90.8"	"89.1"	""	"991"	"23"	"36.000"	"29.000"	"0.264267440714116"	"27"	"0.002937"	"0.02743"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQITEPGPDEK"	"[K].sQITEPGPDEk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5GFD9"	"Protein IMPACT OS=Rattus norvegicus OX=10116 GN=Impact PE=1 SV=1"	"Q5GFD9"	"Protein IMPACT OS=Rattus norvegicus OX=10116 GN=Impact PE=1 SV=1"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"829.95343"	"1658.89958"	"1658.90014"	"-0.33"	"-0.00028"	"10/116"	"10"	"116"	"122109.849853516"	"HCD"	"MS2"	"15.80414"	"9.5"	"100.000"	"45.3902"	"13449"	"13449"	"13419"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.7"	""	"8.3"	""	"11.7"	""	"18.1"	""	"19.9"	"20.8"	""	"982"	"27"	"36.000"	"29.000"	"0.0961792734691442"	"29"	"0.0001301"	"0.003994"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TINEVENQILTR"	"[R].tINEVENQILTR.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"829.96674"	"1658.92620"	"1658.92746"	"-0.77"	"-0.00063"	"4/126"	"4"	"126"	"83854.4630737305"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"87.4814"	"30448"	"30448"	"30426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.1"	""	"6.3"	""	"5.1"	""	"9.9"	""	"16.9"	"11.9"	""	"945"	"14"	"36.000"	"29.000"	"1.73940940046096"	"19"	"0.006769"	"0.07758"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TINEVENQILTR"	"[R].tINEVENQILTR.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"553.64697"	"1658.92636"	"1658.92746"	"-0.66"	"-0.00037"	"14/126"	"14"	"126"	"493199.874694824"	"HCD"	"MS2"	"14.59838"	"7.3"	"100.000"	"87.5975"	"30488"	"30488"	"30472"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.1"	""	"7.6"	""	"6.9"	""	"11.6"	""	"17.5"	"11.4"	""	"945"	"51"	"36.000"	"29.000"	"0.000415338139202592"	""	"0"	"0.0002126"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TINEVENQILTR"	"[R].tINEVENQILTR.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"829.96692"	"1658.92656"	"1658.92746"	"-0.54"	"-0.00045"	"6/126"	"6"	"126"	"124152.412963867"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"87.8339"	"30580"	"30580"	"30565"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.8"	""	"7.8"	""	"9.1"	""	"11.7"	""	"17.8"	"16.7"	""	"943"	"39"	"36.000"	"29.000"	"0.00573431699304763"	"22"	"0.0002479"	"0.005781"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TINEVENQILTR"	"[R].tINEVENQILTR.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"553.64709"	"1658.92673"	"1658.92746"	"-0.44"	"-0.00024"	"14/126"	"14"	"126"	"577689.541137695"	"HCD"	"MS2"	"12.03491"	"8.7"	"100.000"	"87.7808"	"30564"	"30564"	"30552"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.8"	""	"9.1"	""	"12.1"	""	"14.7"	""	"14.3"	"20.9"	""	"944"	"50"	"36.000"	"29.000"	"0.00043847213456013"	"28"	"0"	"0.0001269"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TINEVENQILTR"	"[R].tINEVENQILTR.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"829.96771"	"1658.92815"	"1658.92746"	"0.41"	"0.00034"	"8/126"	"8"	"126"	"318808.167480469"	"HCD"	"MS2"	"2.843951"	"16.8"	"100.000"	"87.7550"	"30554"	"30554"	"30543"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.4"	""	"16.7"	""	"15.4"	""	"25.8"	""	"40.4"	"39.6"	""	"941"	"70"	"36.000"	"29.000"	"4.31081740602402E-06"	""	"0"	"5.951E-06"	"0.952"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TINEVENQILTR"	"[R].tINEVENQILTR.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"553.64764"	"1658.92838"	"1658.92746"	"0.55"	"0.00030"	"11/126"	"11"	"126"	"325356.559814453"	"HCD"	"MS2"	"27.76383"	"8.6"	"100.000"	"87.5093"	"30459"	"30459"	"30434"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.6"	""	"10.7"	""	"11.3"	""	"18.3"	""	"17.3"	"18.5"	""	"937"	"30"	"36.000"	"29.000"	"0.0455732074339508"	"26"	"0"	"0.001221"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TINEVENQILTR"	"[R].tINEVENQILTR.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.7551"	"0.0000"	"1"	"1"	"1"	"829.96790"	"1658.92851"	"1658.92746"	"0.63"	"0.00052"	"13/126"	"13"	"126"	"162719.917480469"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"87.5442"	"30467"	"30467"	"30445"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.3"	""	"14.1"	""	"9.6"	""	"17.0"	""	"21.0"	"25.6"	""	"937"	"49"	"36.000"	"29.000"	"0.0005993901409978"	"28"	"0"	"0.0006705"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDPAALTDDEINR"	"[K].tDPAALTDDEINR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"830.42236"	"1659.83745"	"1659.83871"	"-0.76"	"-0.00063"	"7/116"	"7"	"116"	"132410.623474121"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"60.9763"	"19778"	"19778"	"19753"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.2"	""	"10.9"	""	"10.3"	""	"10.8"	""	"10.8"	"16.8"	""	"758"	"11"	"35.000"	"28.000"	"3.01050400960503"	"13"	"0.004069"	"0.04442"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDPAALTDDEINR"	"[K].tDPAALTDDEINR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"830.42419"	"1659.84111"	"1659.83871"	"1.45"	"0.00120"	"7/116"	"7"	"116"	"124469.352905273"	"HCD"	"MS2"	"0"	"7.2"	"100.000"	"61.1367"	"19828"	"19828"	"19798"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.6"	""	"11.1"	""	"9.0"	""	"12.5"	""	"15.0"	"9.7"	""	"769"	"7"	"35.000"	"28.000"	"8.52896523413183"	"13"	"0.006639"	"0.07411"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLDDGIDDERLR"	"[K].nLDDGIDDERLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"1"	"3"	"3"	"0.8537"	"0.0000"	"1"	"1"	"1"	"553.95471"	"1659.84958"	"1659.84994"	"-0.22"	"-0.00012"	"8/122"	"8"	"122"	"1482274.40637207"	"HCD"	"MS2"	"12.84112"	"50.3"	"100.000"	"52.9329"	"16522"	"16522"	"16501"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"111.3"	""	"66.6"	""	"65.3"	""	"70.5"	"1.5"	"79.3"	"80.2"	""	"825"	"41"	"36.000"	"29.000"	"0.00307910112844152"	"21"	"0"	"0.0006323"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDAPDTLLLEK"	"[K].sDAPDTLLLEk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q08603"	"Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus OX=10116 GN=Rabggtb PE=1 SV=1"	"Q08603"	"Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus OX=10116 GN=Rabggtb PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"3"	"553.98956"	"1659.95414"	"1659.95692"	"-1.68"	"-0.00093"	"8/98"	"8"	"98"	"345627.735107422"	"HCD"	"MS2"	"55.62424"	"8.8"	"100.000"	"89.1031"	"31069"	"31069"	"31046"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.4"	""	"9.0"	""	"11.7"	""	"16.8"	""	"18.1"	"16.4"	""	"965"	"12"	"36.000"	"29.000"	"3.06547174618467"	"17"	"0.005427"	"0.0617"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEDHGILDQFSR"	"[K].dEDHGILDQFSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"554.27533"	"1660.81144"	"1660.81283"	"-0.84"	"-0.00046"	"12/114"	"12"	"114"	"814495.818603516"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"66.0030"	"21799"	"21799"	"21769"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.0"	""	"20.5"	""	"25.8"	""	"30.2"	""	"37.9"	"42.0"	""	"608"	"20"	"34.000"	"27.000"	"0.31979640964226"	"14"	"0"	"0.0002928"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDSVGIEADDER"	"[K].iLDSVGIEADDER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02401"	"60S acidic ribosomal protein P2 OS=Rattus norvegicus OX=10116 GN=Rplp2 PE=1 SV=2"	"P02401"	"60S acidic ribosomal protein P2 OS=Rattus norvegicus OX=10116 GN=Rplp2 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"830.93298"	"1660.85869"	"1660.85911"	"-0.25"	"-0.00021"	"10/114"	"10"	"114"	"111460.914733887"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"86.8815"	"30211"	"30211"	"30190"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.5"	""	"5.7"	""	"7.5"	""	"11.6"	""	"7.6"	"9.7"	""	"944"	"28"	"36.000"	"29.000"	"0.0754991389506123"	"28"	"0"	"0.0004914"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDSVGIEADDER"	"[K].iLDSVGIEADDER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02401"	"60S acidic ribosomal protein P2 OS=Rattus norvegicus OX=10116 GN=Rplp2 PE=1 SV=2"	"P02401"	"60S acidic ribosomal protein P2 OS=Rattus norvegicus OX=10116 GN=Rplp2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"830.93402"	"1660.86077"	"1660.85911"	"1.00"	"0.00083"	"5/114"	"5"	"114"	"81679.4151000977"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"86.9534"	"30236"	"30236"	"30219"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.9"	""	"2.9"	""	"4.3"	""	"6.4"	""	"9.2"	"5.6"	""	"950"	"9"	"36.000"	"29.000"	"6.30512367421626"	"13"	"0.005119"	"0.05849"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATEAATVAAAAEAR"	"[R].eATEAATVAAAAEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"0.8983"	"0.0000"	"1"	"1"	"1"	"554.29395"	"1660.86728"	"1660.87034"	"-1.84"	"-0.00102"	"15/136"	"15"	"136"	"1717687.01037598"	"HCD"	"MS2"	"38.2747"	"18.1"	"100.000"	"60.1096"	"19423"	"19423"	"19413"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.1"	"3.3"	"19.3"	""	"28.6"	""	"30.5"	"1.7"	"28.6"	"36.2"	""	"984"	"59"	"36.000"	"29.000"	"6.16545458071176E-05"	"22"	"0"	"9.825E-07"	"1.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATEAATVAAAAEAR"	"[R].eATEAATVAAAAEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"554.29431"	"1660.86838"	"1660.87034"	"-1.18"	"-0.00065"	"17/136"	"17"	"136"	"3179571.20532227"	"HCD"	"MS2"	"0"	"18.7"	"100.000"	"60.3790"	"19523"	"19523"	"19514"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.0"	"4.7"	"16.5"	""	"21.2"	""	"36.1"	""	"44.5"	"33.9"	""	"989"	"62"	"36.000"	"29.000"	"2.78718820805934E-05"	""	"0"	"2.072E-07"	"1.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATEAATVAAAAEAR"	"[R].eATEAATVAAAAEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"0.8961"	"0.0000"	"1"	"1"	"1"	"554.29431"	"1660.86838"	"1660.87034"	"-1.18"	"-0.00065"	"18/136"	"18"	"136"	"3591979.99371338"	"HCD"	"MS2"	"37.75496"	"20.9"	"100.000"	"60.0944"	"19423"	"19423"	"19417"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.8"	"9.8"	"20.8"	""	"24.5"	""	"40.3"	""	"40.4"	"40.9"	""	"989"	"77"	"36.000"	"29.000"	"9.88931694533392E-07"	"26"	"0"	"1.729E-07"	"1.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATEAATVAAAAEAR"	"[R].eATEAATVAAAAEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"0.8986"	"0.0000"	"1"	"1"	"1"	"554.29437"	"1660.86856"	"1660.87034"	"-1.07"	"-0.00059"	"17/136"	"17"	"136"	"1431589.29833984"	"HCD"	"MS2"	"33.82028"	"17.1"	"100.000"	"59.8227"	"19324"	"19324"	"19315"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.1"	""	"21.1"	""	"24.2"	""	"26.0"	""	"36.9"	"33.3"	""	"996"	"69"	"36.000"	"29.000"	"6.68696950646657E-06"	"24"	"0"	"2.927E-07"	"1.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATEAATVAAAAEAR"	"[R].eATEAATVAAAAEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"0.8841"	"0.0000"	"1"	"1"	"1"	"554.29449"	"1660.86893"	"1660.87034"	"-0.85"	"-0.00047"	"18/136"	"18"	"136"	"2725154.36236572"	"HCD"	"MS2"	"5.606003"	"23.1"	"100.000"	"60.3853"	"19538"	"19538"	"19528"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.3"	"5.2"	"24.0"	""	"27.0"	""	"45.5"	""	"50.0"	"46.0"	""	"998"	"69"	"36.000"	"29.000"	"6.95185244669705E-06"	"25"	"0"	"6.677E-07"	"1.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATEAATVAAAAEAR"	"[R].eATEAATVAAAAEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"830.93848"	"1660.86968"	"1660.87034"	"-0.40"	"-0.00033"	"13/136"	"13"	"136"	"1564656.70922852"	"HCD"	"MS2"	"0"	"62.4"	"100.000"	"60.4617"	"19556"	"19556"	"19544"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.3"	""	"55.6"	""	"71.8"	""	"124.4"	"0.5"	"137.4"	"135.0"	""	"994"	"94"	"36.000"	"29.000"	"2.08140401863605E-08"	""	"0"	"1.229E-10"	"1.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATEAATVAAAAEAR"	"[R].eATEAATVAAAAEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.7473"	"0.0000"	"1"	"1"	"1"	"830.93970"	"1660.87212"	"1660.87034"	"1.07"	"0.00089"	"12/136"	"12"	"136"	"1465107.94580078"	"HCD"	"MS2"	"0"	"61.6"	"100.000"	"60.2526"	"19486"	"19486"	"19473"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.4"	""	"53.1"	""	"67.9"	""	"126.7"	"0.9"	"131.5"	"144.3"	""	"993"	"91"	"36.000"	"29.000"	"4.10127841965069E-08"	""	"0"	"1.153E-09"	"1.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATEAATVAAAAEAR"	"[R].eATEAATVAAAAEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"830.94012"	"1660.87297"	"1660.87034"	"1.58"	"0.00131"	"8/136"	"8"	"136"	"171515.45880127"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"60.5595"	"19608"	"19608"	"19591"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.1"	""	"10.5"	""	"14.0"	""	"21.7"	""	"26.7"	"25.5"	""	"990"	"42"	"36.000"	"29.000"	"0.00284187648792627"	"21"	"0"	"7.721E-05"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATEAATVAAAAEAR"	"[R].eATEAATVAAAAEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"830.94019"	"1660.87309"	"1660.87034"	"1.66"	"0.00138"	"13/136"	"13"	"136"	"274256.391479492"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"59.7046"	"19284"	"19284"	"19280"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.7"	""	"10.6"	""	"20.9"	""	"34.6"	"0.8"	"35.4"	"37.0"	""	"990"	"51"	"36.000"	"29.000"	"0.000405140070126721"	""	"0"	"3.693E-06"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATEAATVAAAAEAR"	"[R].eATEAATVAAAAEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.8315"	"0.0000"	"1"	"1"	"1"	"830.94055"	"1660.87383"	"1660.87034"	"2.10"	"0.00174"	"13/136"	"13"	"136"	"801038.951782227"	"HCD"	"MS2"	"0"	"37.6"	"100.000"	"60.1851"	"19452"	"19452"	"19438"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.1"	""	"29.7"	""	"39.8"	""	"82.1"	"0.6"	"83.5"	"83.1"	""	"1032"	"89"	"37.000"	"30.000"	"6.58642425346653E-08"	""	"0"	"5.202E-09"	"1.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATEAATVAAAAEAR"	"[R].eATEAATVAAAAEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.8364"	"0.0000"	"1"	"1"	"1"	"830.94135"	"1660.87541"	"1660.87034"	"3.05"	"0.00253"	"12/136"	"12"	"136"	"853056.247070313"	"HCD"	"MS2"	"100"	"41.7"	"100.000"	"59.9800"	"19381"	"19381"	"19373"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.0"	""	"37.7"	""	"51.8"	""	"82.3"	""	"100.6"	"86.8"	""	"1038"	"55"	"37.000"	"30.000"	"0.000159649424685043"	"25"	"0"	"3.412E-07"	"1.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATEAATVAAAAEAR"	"[R].eATEAATVAAAAEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"830.94153"	"1660.87578"	"1660.87034"	"3.27"	"0.00272"	"7/136"	"7"	"136"	"143800.809875488"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"60.7824"	"19683"	"19683"	"19670"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.4"	""	"6.8"	""	"9.9"	""	"18.4"	""	"18.1"	"17.1"	""	"1038"	"40"	"37.000"	"30.000"	"0.00511879053042598"	"28"	"0"	"0.003154"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTNDMIHAENMR"	"[K].tTNDMIHAENMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.8675"	"0.0000"	"1"	"1"	"1"	"554.60242"	"1661.79270"	"1661.79369"	"-0.60"	"-0.00033"	"10/122"	"10"	"122"	"6028738.09796143"	"HCD"	"MS2"	"30.58327"	"87.5"	"100.000"	"40.3474"	"11403"	"11403"	"11382"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"131.9"	""	"89.6"	""	"80.4"	""	"132.7"	""	"193.3"	"203.8"	""	"498"	"83"	"33.000"	"26.000"	"1.19178892988337E-07"	""	"0"	"5.972E-07"	"1.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTNDMIHAENMR"	"[K].tTNDMIHAENMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"554.60248"	"1661.79288"	"1661.79369"	"-0.49"	"-0.00027"	"12/122"	"12"	"122"	"1816309.31665039"	"HCD"	"MS2"	"18.77501"	"66.7"	"100.000"	"40.4871"	"11469"	"11469"	"11445"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.0"	""	"83.8"	"1.8"	"79.8"	""	"102.3"	""	"134.4"	"145.0"	""	"499"	"13"	"33.000"	"26.000"	"1.36480482742046"	"14"	"0"	"0.001684"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTNDMIHAENMR"	"[K].tTNDMIHAENMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"554.60254"	"1661.79306"	"1661.79369"	"-0.38"	"-0.00021"	"10/122"	"10"	"122"	"6456527.29718018"	"HCD"	"MS2"	"34.06529"	"86.4"	"100.000"	"40.1399"	"11327"	"11327"	"11310"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"134.9"	""	"89.2"	""	"98.7"	""	"117.6"	""	"192.5"	"194.7"	""	"499"	"81"	"33.000"	"26.000"	"1.93673655598859E-07"	""	"0"	"5.564E-07"	"1.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTNDMIHAENMR"	"[K].tTNDMIHAENMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"554.60272"	"1661.79361"	"1661.79369"	"-0.05"	"-0.00003"	"14/122"	"14"	"122"	"2316059.4074707"	"HCD"	"MS2"	"19.76241"	"63.3"	"100.000"	"40.6348"	"11519"	"11519"	"11503"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.6"	""	"77.5"	""	"77.2"	""	"87.0"	""	"132.8"	"139.9"	""	"506"	"39"	"34.000"	"27.000"	"0.00355730023604868"	"20"	"0"	"5.198E-05"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVEEVDEEGK"	"[R].vAVEEVDEEGk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"831.45410"	"1661.90093"	"1661.89980"	"0.68"	"0.00056"	"9/90"	"9"	"90"	"221257.324279785"	"HCD"	"MS2"	"100"	"17.8"	"100.000"	"59.4443"	"19173"	"19173"	"19142"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.5"	""	"11.6"	""	"10.6"	""	"31.6"	""	"55.2"	"55.2"	""	"1099"	"9"	"37.000"	"30.000"	"6.62167249234303"	"13"	"0.001374"	"0.018"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVEEVDEEGK"	"[R].vAVEEVDEEGk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.9298"	"0.0000"	"1"	"1"	"1"	"831.45679"	"1661.90630"	"1661.89980"	"3.91"	"0.00325"	"16/90"	"16"	"90"	"295297.839904785"	"HCD"	"MS2"	"0"	"26.0"	"100.000"	"59.2468"	"19107"	"19107"	"19085"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.4"	""	"19.8"	""	"13.0"	""	"47.8"	""	"80.0"	"76.6"	""	"1110"	"57"	"37.000"	"30.000"	"0.000102162846081527"	"20"	"0"	"2.088E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTNDMIHAENMR"	"[K].tTnDMIHAENMR.[L]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"554.93024"	"1662.77616"	"1662.77771"	"-0.93"	"-0.00052"	"9/122"	"9"	"122"	"1054379.73883057"	"HCD"	"MS2"	"7.940912"	"44.3"	"100.000"	"44.3673"	"13044"	"13044"	"13016"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.1"	""	"50.9"	""	"52.2"	""	"69.7"	""	"96.2"	"93.9"	""	"410"	"19"	"33.000"	"26.000"	"0.264699951090775"	"16"	"0"	"0.0009978"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTNDMIHAENMR"	"[K].tTnDMIHAENMR.[L]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"554.93085"	"1662.77799"	"1662.77771"	"0.17"	"0.00009"	"10/122"	"10"	"122"	"1070534.90356445"	"HCD"	"MS2"	"16.84457"	"41.7"	"100.000"	"44.4721"	"13075"	"13075"	"13049"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.7"	""	"44.6"	""	"51.3"	""	"69.8"	"0.1"	"92.4"	"88.1"	""	"418"	"25"	"33.000"	"26.000"	"0.0714737034853651"	"18"	"0"	"0.0007706"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNSTMGYMAAK"	"[R].dNSTMGYmAAk.[K]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"831.91504"	"1662.82280"	"1662.82315"	"-0.21"	"-0.00017"	"11/104"	"11"	"104"	"202502.667724609"	"HCD"	"MS2"	"0"	"16.8"	"100.000"	"44.9277"	"13260"	"13260"	"13232"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.0"	""	"23.6"	""	"33.0"	""	"10.2"	""	"26.7"	"25.4"	""	"740"	"22"	"35.000"	"28.000"	"0.261939940222131"	"14"	"0.002711"	"0.02603"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNSTMGYMAAK"	"[R].dNSTMGYmAAk.[K]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"831.91528"	"1662.82329"	"1662.82315"	"0.08"	"0.00007"	"10/104"	"10"	"104"	"172405.213806152"	"HCD"	"MS2"	"100"	"15.0"	"100.000"	"44.7801"	"13211"	"13211"	"13185"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.9"	""	"20.4"	""	"27.0"	""	"14.7"	""	"27.1"	"23.2"	""	"735"	"21"	"35.000"	"28.000"	"0.263789402042226"	"14"	"0.0001301"	"0.004126"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VITNVNDNYEPR"	"[K].vITNVNDNYEPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P31721"	"Complement C1q subcomponent subunit B OS=Rattus norvegicus OX=10116 GN=C1qb PE=1 SV=2"	"P31721"	"Complement C1q subcomponent subunit B OS=Rattus norvegicus OX=10116 GN=C1qb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"831.93524"	"1662.86321"	"1662.86486"	"-1.00"	"-0.00083"	"8/118"	"8"	"118"	"279079.692321777"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"58.1692"	"18667"	"18667"	"18639"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.8"	""	"26.5"	""	"20.0"	""	"38.9"	""	"44.9"	"51.8"	""	"953"	"6"	"36.000"	"29.000"	"11.7236516337635"	"13"	"0.003507"	"0.03626"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VITNVNDNYEPR"	"[K].vITNVNDNYEPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P31721"	"Complement C1q subcomponent subunit B OS=Rattus norvegicus OX=10116 GN=C1qb PE=1 SV=2"	"P31721"	"Complement C1q subcomponent subunit B OS=Rattus norvegicus OX=10116 GN=C1qb PE=1 SV=2"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"831.93567"	"1662.86406"	"1662.86486"	"-0.48"	"-0.00040"	"10/118"	"10"	"118"	"182303.338500977"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"58.3624"	"18731"	"18731"	"18703"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.5"	""	"18.0"	""	"11.9"	""	"21.7"	""	"26.3"	"19.8"	""	"949"	"25"	"36.000"	"29.000"	"0.161896036564605"	"23"	"0.0001301"	"0.004655"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQQVEEMK"	"[R].aLEQQVEEMk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"831.95868"	"1662.91008"	"1662.91368"	"-2.16"	"-0.00180"	"8/94"	"8"	"94"	"163732.114685059"	"HCD"	"MS2"	"0"	"16.3"	"100.000"	"75.4755"	"25661"	"25661"	"25641"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.4"	""	"17.5"	""	"27.6"	""	"27.9"	""	"34.8"	"28.9"	""	"1158"	"20"	"37.000"	"30.000"	"0.523213045285212"	"21"	"0.00263"	"0.02566"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQQVEEMK"	"[R].aLEQQVEEMk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"554.97540"	"1662.91166"	"1662.91368"	"-1.22"	"-0.00067"	"10/94"	"10"	"94"	"614559.273071289"	"HCD"	"MS2"	"50.43796"	"18.1"	"100.000"	"75.5679"	"25698"	"25698"	"25675"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.8"	""	"21.4"	""	"26.7"	""	"32.8"	""	"34.3"	"37.4"	""	"1148"	"32"	"37.000"	"30.000"	"0.0400785399940297"	"23"	"0"	"0.002384"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQQVEEMK"	"[R].aLEQQVEEMk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"831.95984"	"1662.91240"	"1662.91368"	"-0.77"	"-0.00064"	"7/94"	"7"	"94"	"152298.085876465"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"75.5896"	"25697"	"25697"	"25675"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.8"	""	"22.4"	""	"20.7"	""	"24.9"	""	"27.2"	"26.9"	""	"1147"	"34"	"37.000"	"30.000"	"0.0224147253736943"	"21"	"0"	"0.00292"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQQVEEMK"	"[R].aLEQQVEEMk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"831.96002"	"1662.91277"	"1662.91368"	"-0.55"	"-0.00046"	"6/94"	"6"	"94"	"126578.774108887"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"75.9287"	"25835"	"25835"	"25807"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.1"	""	"12.7"	""	"16.3"	""	"16.0"	""	"19.0"	"17.6"	""	"1141"	"18"	"37.000"	"30.000"	"0.953357195464258"	"15"	"0.003653"	"0.03751"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQQVEEMK"	"[R].aLEQQVEEMk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"554.97638"	"1662.91458"	"1662.91368"	"0.55"	"0.00030"	"11/94"	"11"	"94"	"685435.798034668"	"HCD"	"MS2"	"49.62131"	"20.3"	"100.000"	"75.7440"	"25760"	"25760"	"25730"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.3"	""	"20.4"	""	"32.0"	""	"40.7"	""	"39.4"	"36.9"	""	"1114"	"34"	"37.000"	"30.000"	"0.0224830483882956"	"22"	"0"	"0.003148"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNPGVVTCLDEAR"	"[K].dNPGVVTcLDEAR.[H]"	"N-Term(TMT6plex); C8(Methylthio)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"832.40295"	"1663.79863"	"1663.79811"	"0.32"	"0.00026"	"4/138"	"4"	"138"	"82729.2241210938"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"86.2282"	"29951"	"29951"	"29931"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.0"	""	"3.3"	""	"6.8"	""	"6.8"	""	"6.0"	"7.8"	""	"564"	"14"	"34.000"	"27.000"	"1.1488123834076"	"13"	"0.001211"	"0.01486"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDQQNPEEDFS"	"[R].lLDQQNPEEDFS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63768"	"Adapter molecule crk OS=Rattus norvegicus OX=10116 GN=Crk PE=1 SV=1"	"Q63768"	"Adapter molecule crk OS=Rattus norvegicus OX=10116 GN=Crk PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"832.40320"	"1663.79912"	"1663.80126"	"-1.29"	"-0.00107"	"4/110"	"4"	"110"	"114065.805603027"	"HCD"	"MS2"	"0"	"0.7"	"100.000"	"97.1265"	"34057"	"34057"	"34044"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.0"	""	""	""	""	""	""	""	"4.6"	""	""	"579"	"13"	"34.000"	"27.000"	"1.36347935991918"	"13"	"0.006189"	"0.07044"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDQQNPEEDFS"	"[R].lLDQQNPEEDFS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63768"	"Adapter molecule crk OS=Rattus norvegicus OX=10116 GN=Crk PE=1 SV=1"	"Q63768"	"Adapter molecule crk OS=Rattus norvegicus OX=10116 GN=Crk PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"832.40411"	"1663.80095"	"1663.80126"	"-0.19"	"-0.00016"	"5/110"	"5"	"110"	"67380.2171630859"	"HCD"	"MS2"	"0"	"1.0"	"100.000"	"97.1035"	"34067"	"34067"	"34062"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	""	""	"1.8"	""	"2.3"	""	"2.4"	"3.2"	""	"602"	"29"	"34.000"	"27.000"	"0.0416453480070506"	"14"	"0.001374"	"0.01623"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGTGTSEGPGGAFSR"	"[K].gPGTGTSEGPGGAFSR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"B2RYF7"	"WASH complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Washc1 PE=2 SV=1"	"B2RYF7"	"WASH complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Washc1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"5"	"832.41461"	"1663.82195"	"1663.82373"	"-1.07"	"-0.00089"	"5/142"	"5"	"142"	"177225.631164551"	"HCD"	"MS2"	"100"	"14.3"	"100.000"	"41.8956"	"12031"	"12031"	"12001"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.2"	""	"19.0"	""	"20.3"	""	"23.8"	""	"31.8"	"20.9"	""	"726"	"2"	"35.000"	"28.000"	"21.8729129744992"	"13"	"0.003449"	"0.03367"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGTGTSEGPGGAFSR"	"[K].gPGTGTSEGPGGAFSR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"B2RYF7"	"WASH complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Washc1 PE=2 SV=1"	"B2RYF7"	"WASH complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Washc1 PE=2 SV=1"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"832.41528"	"1663.82329"	"1663.82373"	"-0.26"	"-0.00022"	"14/142"	"14"	"142"	"340648.571228027"	"HCD"	"MS2"	"18.63938"	"22.1"	"100.000"	"41.8239"	"12012"	"12012"	"11985"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.6"	""	"26.3"	""	"26.7"	""	"51.7"	""	"42.1"	"35.3"	""	"723"	"49"	"35.000"	"28.000"	"0.000500159245998299"	"21"	"0"	"8.107E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENLEQAFEVAER"	"[R].eNLEQAFEVAER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"832.42804"	"1663.84880"	"1663.84888"	"-0.05"	"-0.00004"	"4/128"	"4"	"128"	"83446.6364746094"	"HCD"	"MS2"	"10.10608"	"4.7"	"100.000"	"88.8717"	"30981"	"30981"	"30967"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.8"	""	"1.1"	""	"8.2"	""	"9.3"	""	"12.2"	"7.7"	""	"923"	"7"	"36.000"	"29.000"	"8.69304054799543"	"13"	"0.008437"	"0.1021"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPDIYQIAK"	"[R].eEPDIYQIAk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"832.46796"	"1663.92864"	"1663.93071"	"-1.25"	"-0.00104"	"7/84"	"7"	"84"	"298860.028442383"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"81.7391"	"28184"	"28184"	"28164"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.3"	""	"29.1"	""	"26.8"	""	"34.8"	""	"47.3"	"59.0"	""	"1013"	"47"	"37.000"	"30.000"	"0.00104370905107125"	"27"	"0"	"0.002893"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPDIYQIAK"	"[R].eEPDIYQIAk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.5172"	"0.0000"	"1"	"1"	"1"	"555.31445"	"1663.92881"	"1663.93071"	"-1.14"	"-0.00063"	"9/84"	"9"	"84"	"641302.389526367"	"HCD"	"MS2"	"32.08129"	"17.6"	"100.000"	"81.4737"	"28075"	"28075"	"28059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.9"	""	"18.5"	""	"25.7"	""	"25.2"	""	"31.9"	"39.5"	""	"1018"	"29"	"37.000"	"30.000"	"0.0697778818977911"	"28"	"0.006769"	"0.077"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPDIYQIAK"	"[R].eEPDIYQIAk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"832.46838"	"1663.92949"	"1663.93071"	"-0.73"	"-0.00061"	"11/84"	"11"	"84"	"271575.912597656"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"81.6831"	"28159"	"28159"	"28139"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.6"	""	"28.8"	""	"19.7"	""	"39.5"	""	"47.7"	"44.7"	""	"1024"	"19"	"37.000"	"30.000"	"0.629897610655939"	"18"	"0.00447"	"0.04752"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEIPEEALYK"	"[R].nEIPEEALYk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"555.31470"	"1663.92954"	"1663.93071"	"-0.70"	"-0.00039"	"5/98"	"5"	"98"	"481595.766479492"	"HCD"	"MS2"	"12.77728"	"16.6"	"100.000"	"77.5591"	"26506"	"26506"	"26483"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.4"	""	"20.6"	""	"21.3"	""	"31.5"	""	"32.4"	"32.0"	""	"1025"	"29"	"37.000"	"30.000"	"0.0645199273544511"	"20"	"0.007627"	"0.09197"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEIPEEALYK"	"[R].nEIPEEALYk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"832.46893"	"1663.93059"	"1663.93071"	"-0.07"	"-0.00006"	"12/98"	"12"	"98"	"275299.405700684"	"HCD"	"MS2"	"0"	"20.0"	"100.000"	"77.4106"	"26435"	"26435"	"26416"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.3"	""	"20.1"	""	"18.3"	""	"43.9"	""	"38.6"	"47.3"	""	"1019"	"36"	"37.000"	"30.000"	"0.0132173438499954"	"22"	"0.0023"	"0.02292"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEIPEEALYK"	"[R].nEIPEEALYk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"832.46942"	"1663.93157"	"1663.93071"	"0.52"	"0.00043"	"10/98"	"10"	"98"	"210523.638793945"	"HCD"	"MS2"	"0"	"15.8"	"100.000"	"77.2821"	"26394"	"26394"	"26364"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.2"	""	"14.6"	""	"18.4"	""	"33.3"	""	"34.0"	"35.3"	""	"1024"	"29"	"37.000"	"30.000"	"0.0670301144575696"	"17"	"0.001546"	"0.01876"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPDIYQIAK"	"[R].eEPDIYQIAk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"832.46967"	"1663.93205"	"1663.93071"	"0.81"	"0.00067"	"10/84"	"10"	"84"	"171362.218994141"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"81.3813"	"28039"	"28039"	"28017"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.6"	""	"13.6"	""	"14.9"	""	"17.5"	""	"20.6"	"21.7"	""	"1025"	"24"	"37.000"	"30.000"	"0.187367330701727"	"20"	"0.007627"	"0.09104"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQmVQEDLEk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"832.94867"	"1664.89006"	"1664.89294"	"-1.73"	"-0.00144"	"12/94"	"12"	"94"	"359865.597412109"	"HCD"	"MS2"	"67.24702"	"26.8"	"100.000"	"56.0363"	"17797"	"17797"	"17773"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.7"	""	"25.1"	""	"24.3"	""	"57.5"	""	"59.5"	"59.3"	""	"1073"	"12"	"37.000"	"30.000"	"3.24765379305475"	"18"	"0.005921"	"0.06811"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQmVQEDLEk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.5227"	"0.0000"	"1"	"1"	"1"	"555.63556"	"1664.89212"	"1664.89294"	"-0.49"	"-0.00027"	"10/94"	"10"	"94"	"1159639.02679443"	"HCD"	"MS2"	"55.7168"	"37.0"	"100.000"	"56.4855"	"17980"	"17980"	"17958"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.0"	""	"34.8"	""	"38.0"	""	"85.4"	"2.8"	"73.1"	"72.6"	""	"1070"	"44"	"37.000"	"30.000"	"0.00215950285237669"	""	"0.0002479"	"0.006009"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQmVQEDLEk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.4878"	"0.0000"	"1"	"1"	"1"	"555.63556"	"1664.89212"	"1664.89294"	"-0.49"	"-0.00027"	"9/94"	"9"	"94"	"1771487.30407715"	"HCD"	"MS2"	"15.01495"	"50.1"	"100.000"	"56.1840"	"17857"	"17857"	"17837"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"51.8"	""	"37.8"	""	"42.8"	""	"131.3"	"1.2"	"112.0"	"99.2"	""	"1070"	"41"	"37.000"	"30.000"	"0.00405839002640613"	""	"0"	"0.002647"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQmVQEDLEk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"832.94983"	"1664.89238"	"1664.89294"	"-0.34"	"-0.00028"	"15/94"	"15"	"94"	"554116.038024902"	"HCD"	"MS2"	"0"	"41.1"	"100.000"	"56.3681"	"17932"	"17932"	"17910"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.2"	""	"30.3"	""	"30.5"	""	"118.8"	""	"87.9"	"80.2"	""	"1071"	"50"	"37.000"	"30.000"	"0.000572478887823733"	"28"	"0"	"0.001318"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQmVQEDLEk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.5476"	"0.0000"	"1"	"1"	"1"	"555.63593"	"1664.89322"	"1664.89294"	"0.17"	"0.00009"	"10/94"	"10"	"94"	"1903959.67755127"	"HCD"	"MS2"	"53.6444"	"56.1"	"100.000"	"56.5222"	"17981"	"17981"	"17957"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.7"	""	"49.6"	""	"44.5"	""	"145.1"	""	"117.7"	"114.9"	""	"1076"	"42"	"37.000"	"30.000"	"0.00332492823274468"	""	"0"	"0.001137"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQmVQEDLEk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"832.95026"	"1664.89324"	"1664.89294"	"0.18"	"0.00015"	"8/94"	"8"	"94"	"499029.555053711"	"HCD"	"MS2"	"0"	"40.4"	"100.000"	"56.5590"	"17996"	"17996"	"17972"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.1"	""	"27.8"	""	"29.9"	""	"108.6"	""	"88.4"	"90.8"	""	"1076"	"46"	"37.000"	"30.000"	"0.00149204621630269"	"26"	"0.0001301"	"0.003954"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQmVQEDLEk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"832.95074"	"1664.89421"	"1664.89294"	"0.76"	"0.00063"	"9/94"	"9"	"94"	"415717.530090332"	"HCD"	"MS2"	"0"	"33.6"	"100.000"	"56.2573"	"17873"	"17873"	"17851"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.7"	""	"25.4"	""	"26.2"	""	"92.9"	""	"73.7"	"66.3"	""	"1062"	"34"	"37.000"	"30.000"	"0.019865272237246"	"25"	"0.000936"	"0.01125"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDEYDYLFK"	"[R].dDEYDYLFk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"833.42419"	"1665.84111"	"1665.84122"	"-0.07"	"-0.00006"	"7/72"	"7"	"72"	"179612.109069824"	"HCD"	"MS2"	"5.243858"	"15.8"	"100.000"	"101.4664"	"35450"	"35450"	"35447"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.3"	""	"9.1"	""	"9.6"	""	"35.2"	"1.7"	"47.0"	"34.2"	""	"881"	"24"	"36.000"	"29.000"	"0.17335880823827"	"17"	"0.0008629"	"0.00958"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDEYDYLFK"	"[R].dDEYDYLFk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"833.42419"	"1665.84111"	"1665.84122"	"-0.07"	"-0.00006"	"7/72"	"7"	"72"	"184459.608703613"	"HCD"	"MS2"	"11.59202"	"16.6"	"100.000"	"101.4121"	"35479"	"35479"	"35473"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.3"	""	"11.2"	""	"12.4"	""	"30.3"	""	"46.0"	"40.2"	""	"881"	"32"	"36.000"	"29.000"	"0.0271610098319983"	"23"	"0.0003538"	"0.006296"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGSGEVYQGPAK"	"[K].nGSGEVYQGPAk.[G]"	"N-Term(TMT6plex); N1(Deamidated); K12(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"833.44525"	"1665.88323"	"1665.88482"	"-0.96"	"-0.00080"	"9/114"	"9"	"114"	"123916.970947266"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"48.5413"	"14731"	"14731"	"14702"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.5"	""	"14.8"	""	"10.6"	""	"15.1"	""	"12.4"	"11.0"	""	"1067"	"21"	"37.000"	"30.000"	"0.406569151848557"	"15"	"0.003111"	"0.03064"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mNGQPQENYk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"833.93384"	"1666.86040"	"1666.86231"	"-1.15"	"-0.00096"	"10/88"	"10"	"88"	"199768.16204834"	"HCD"	"MS2"	"0"	"15.9"	"100.000"	"42.6452"	"12337"	"12337"	"12308"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.8"	""	"23.2"	""	"23.6"	""	"17.1"	""	"22.9"	"26.8"	""	"1010"	"21"	"37.000"	"30.000"	"0.440850541035996"	"18"	"0.002937"	"0.02723"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSPDATVSTEVR"	"[R].yLSPDATVSTEVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"0"	"3"	"3"	"0.8537"	"0.0000"	"1"	"1"	"1"	"556.29907"	"1666.88266"	"1666.88493"	"-1.36"	"-0.00076"	"14/112"	"14"	"112"	"454167.010559082"	"HCD"	"MS2"	"10.5811"	"12.3"	"100.000"	"68.2151"	"22715"	"22715"	"22687"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.9"	""	"14.2"	""	"15.8"	""	"22.8"	""	"28.9"	"22.4"	""	"1079"	"41"	"37.000"	"30.000"	"0.00396270231870763"	"21"	"0"	"0.0001942"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSPDATVSTEVR"	"[R].yLSPDATVSTEVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"833.94501"	"1666.88274"	"1666.88493"	"-1.32"	"-0.00110"	"11/112"	"11"	"112"	"207769.123352051"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"68.0651"	"22654"	"22654"	"22626"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.0"	""	"15.8"	""	"17.6"	""	"21.3"	""	"24.6"	"25.8"	""	"1063"	"15"	"37.000"	"30.000"	"1.66534136247373"	"17"	"0.003189"	"0.03221"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSPDATVSTEVR"	"[R].yLSPDATVSTEVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"556.29962"	"1666.88431"	"1666.88493"	"-0.37"	"-0.00021"	"14/112"	"14"	"112"	"459886.805419922"	"HCD"	"MS2"	"25.30493"	"12.1"	"100.000"	"68.3756"	"22766"	"22766"	"22742"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.3"	""	"12.8"	""	"17.0"	""	"20.5"	""	"22.5"	"28.0"	""	"1075"	"42"	"37.000"	"30.000"	"0.00304353617858061"	"24"	"0"	"0.0008795"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSPDATVSTEVR"	"[R].yLSPDATVSTEVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"833.94647"	"1666.88567"	"1666.88493"	"0.44"	"0.00037"	"12/112"	"12"	"112"	"222857.067077637"	"HCD"	"MS2"	"6.220019"	"14.0"	"100.000"	"68.3387"	"22751"	"22751"	"22726"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.9"	""	"14.1"	""	"16.5"	""	"28.6"	""	"25.2"	"30.3"	""	"1079"	"25"	"37.000"	"30.000"	"0.172580391167851"	"23"	"0.0003538"	"0.00616"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEEDLTGIDDR"	"[K].eFEEDLTGIDDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P02696"	"Retinol-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Rbp1 PE=1 SV=2"	"P02696"	"Retinol-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Rbp1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.40125"	"1667.79521"	"1667.79618"	"-0.58"	"-0.00048"	"7/108"	"7"	"108"	"131353.047485352"	"HCD"	"MS2"	"17.5258"	"8.2"	"100.000"	"82.8333"	"28621"	"28621"	"28606"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.9"	""	"8.0"	""	"10.6"	""	"14.0"	""	"19.4"	"18.7"	""	"518"	"5"	"34.000"	"27.000"	"8.79629456009157"	"13"	"0.005874"	"0.06632"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEEDLTGIDDR"	"[K].eFEEDLTGIDDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P02696"	"Retinol-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Rbp1 PE=1 SV=2"	"P02696"	"Retinol-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Rbp1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.40228"	"1667.79729"	"1667.79618"	"0.67"	"0.00056"	"5/108"	"5"	"108"	"107069.142089844"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"82.8348"	"28620"	"28620"	"28605"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.0"	""	"6.3"	""	"5.9"	""	"11.3"	""	"16.4"	"16.5"	""	"530"	"10"	"34.000"	"27.000"	"2.89231689158921"	"13"	"0.007413"	"0.089"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mnGQPQENYk.[N]"	"N-Term(TMT6plex); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"834.42578"	"1667.84429"	"1667.84633"	"-1.22"	"-0.00102"	"13/88"	"13"	"88"	"628087.030761719"	"HCD"	"MS2"	"0"	"55.8"	"100.000"	"46.7440"	"14010"	"14010"	"13983"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"147.1"	""	"82.0"	""	"80.4"	""	"55.8"	""	"83.4"	"79.8"	""	"878"	"40"	"36.000"	"29.000"	"0.00447161619355757"	"15"	"0.0008629"	"0.0104"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mnGQPQENYk.[N]"	"N-Term(TMT6plex); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.2941"	"0.0000"	"1"	"1"	"1"	"556.61969"	"1667.84452"	"1667.84633"	"-1.09"	"-0.00060"	"11/88"	"11"	"88"	"4162187.8604126"	"HCD"	"MS2"	"53.96075"	"125.1"	"100.000"	"46.9187"	"14081"	"14081"	"14062"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"241.2"	""	"152.7"	""	"164.4"	""	"180.5"	""	"213.9"	"232.8"	""	"882"	"17"	"36.000"	"29.000"	"0.879910680901276"	"14"	"0.0006732"	"0.008718"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mnGQPQENYk.[N]"	"N-Term(TMT6plex); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"834.42590"	"1667.84453"	"1667.84633"	"-1.08"	"-0.00090"	"7/88"	"7"	"88"	"632097.976745605"	"HCD"	"MS2"	"0"	"57.5"	"100.000"	"47.0358"	"14117"	"14117"	"14097"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"138.9"	""	"85.0"	""	"85.6"	""	"66.4"	""	"87.3"	"82.2"	""	"882"	"57"	"36.000"	"29.000"	"8.24970823901318E-05"	"16"	"0"	"0.001536"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mnGQPQENYk.[N]"	"N-Term(TMT6plex); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.3684"	"0.0000"	"1"	"1"	"1"	"556.61981"	"1667.84488"	"1667.84633"	"-0.87"	"-0.00048"	"5/88"	"5"	"88"	"4358727.84637451"	"HCD"	"MS2"	"53.48707"	"132.5"	"100.000"	"47.1532"	"14165"	"14165"	"14145"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"262.9"	""	"160.1"	""	"180.5"	""	"189.9"	""	"223.6"	"235.5"	""	"878"	"19"	"36.000"	"29.000"	"0.537606511477356"	"16"	"0.0003538"	"0.007099"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mnGQPQENYk.[N]"	"N-Term(TMT6plex); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"834.42639"	"1667.84551"	"1667.84633"	"-0.49"	"-0.00041"	"10/88"	"10"	"88"	"187263.605163574"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"46.2579"	"13814"	"13814"	"13785"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.3"	""	"29.8"	""	"26.3"	""	"19.8"	""	"32.7"	"33.4"	""	"882"	"20"	"36.000"	"29.000"	"0.40312393948838"	"14"	"0.001635"	"0.02"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mnGQPQENYk.[N]"	"N-Term(TMT6plex); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"834.42719"	"1667.84709"	"1667.84633"	"0.46"	"0.00038"	"8/88"	"8"	"88"	"223067.116821289"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"46.4096"	"13864"	"13864"	"13836"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.7"	""	"30.8"	""	"37.0"	""	"25.1"	""	"34.0"	"33.1"	""	"894"	"32"	"36.000"	"29.000"	"0.0283339760931846"	"17"	"0.0008629"	"0.01023"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mnGQPQENYk.[N]"	"N-Term(TMT6plex); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"834.42731"	"1667.84734"	"1667.84633"	"0.61"	"0.00051"	"10/88"	"10"	"88"	"238758.591064453"	"HCD"	"MS2"	"9.151481"	"19.7"	"100.000"	"47.3600"	"14250"	"14250"	"14225"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.4"	""	"26.2"	""	"26.7"	""	"22.0"	""	"34.0"	"36.8"	""	"894"	"23"	"36.000"	"29.000"	"0.241717182356675"	"23"	"0.000936"	"0.01267"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mnGQPQENYk.[N]"	"N-Term(TMT6plex); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"834.42761"	"1667.84795"	"1667.84633"	"0.97"	"0.00081"	"9/88"	"9"	"88"	"327119.11315918"	"HCD"	"MS2"	"0"	"32.7"	"100.000"	"45.9424"	"13685"	"13685"	"13658"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.1"	""	"46.4"	""	"57.4"	""	"35.4"	"0.9"	"44.1"	"55.7"	""	"899"	"20"	"36.000"	"29.000"	"0.405256226353878"	"14"	"0.0023"	"0.02333"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTAEMSSILEER"	"[K].tGTAEmSSILEER.[I]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.9464"	"0.0000"	"1"	"1"	"1"	"834.91840"	"1668.82952"	"1668.83118"	"-1.00"	"-0.00083"	"19/118"	"19"	"118"	"552674.500732422"	"HCD"	"MS2"	"0"	"25.4"	"100.000"	"48.9476"	"14909"	"14909"	"14895"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.3"	""	"19.6"	""	"28.8"	""	"69.9"	"0.4"	"53.8"	"49.9"	""	"777"	"56"	"35.000"	"28.000"	"0.000108991096834424"	"19"	"0"	"0.0007917"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTAEMSSILEER"	"[K].tGTAEmSSILEER.[I]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"834.91925"	"1668.83122"	"1668.83118"	"0.03"	"0.00002"	"5/118"	"5"	"118"	"120548.317749023"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"49.5655"	"15149"	"15149"	"15121"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.0"	""	"5.1"	""	"8.3"	""	"14.5"	""	"15.0"	"16.3"	""	"782"	"14"	"35.000"	"28.000"	"1.48654053961339"	"14"	"0.003507"	"0.03652"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTAEMSSILEER"	"[K].tGTAEmSSILEER.[I]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.92004"	"1668.83281"	"1668.83118"	"0.98"	"0.00081"	"12/118"	"12"	"118"	"263988.334960938"	"HCD"	"MS2"	"0"	"14.7"	"100.000"	"49.2504"	"15020"	"15020"	"14998"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.4"	""	"13.6"	""	"18.0"	""	"33.4"	""	"34.7"	"27.9"	""	"789"	"21"	"35.000"	"28.000"	"0.34438720482911"	"14"	"0.001211"	"0.01409"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAPQTQHVSPMR"	"[R].aTAPQTQHVSPmR.[Q]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"3"	"3"	"0.7949"	"0.0000"	"1"	"1"	"1"	"556.96008"	"1668.86570"	"1668.86890"	"-1.92"	"-0.00107"	"9/128"	"9"	"128"	"1881715.15423584"	"HCD"	"MS2"	"5.019367"	"52.8"	"100.000"	"22.4999"	"4184"	"4184"	"4154"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.3"	""	"60.4"	""	"62.0"	""	"112.4"	""	"108.5"	"90.5"	""	"918"	"39"	"36.000"	"29.000"	"0.00555664543299671"	"23"	"0"	"0.0002441"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAPQTQHVSPMR"	"[R].aTAPQTQHVSPmR.[Q]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.96063"	"1668.86734"	"1668.86890"	"-0.94"	"-0.00052"	"8/128"	"8"	"128"	"1818049.34069824"	"HCD"	"MS2"	"4.117915"	"48.1"	"100.000"	"22.5024"	"4168"	"4168"	"4142"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.8"	""	"49.2"	""	"56.4"	""	"99.6"	""	"108.7"	"96.2"	""	"926"	"46"	"36.000"	"29.000"	"0.0010704859978513"	"16"	"0"	"0.001281"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAQTLYDAGEK"	"[K].dAQTLYDAGEk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8608"	"0.0000"	"1"	"1"	"1"	"834.94348"	"1668.87969"	"1668.88449"	"-2.88"	"-0.00240"	"10/114"	"10"	"114"	"367749.389404297"	"HCD"	"MS2"	"0"	"35.0"	"100.000"	"60.3630"	"19517"	"19517"	"19508"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.8"	""	"44.2"	""	"43.6"	""	"60.5"	""	"69.9"	"67.0"	""	"988"	"79"	"36.000"	"29.000"	"5.68495392138551E-07"	"28"	"0"	"3.39E-06"	"1.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAQTLYDAGEK"	"[K].dAQTLYDAGEk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8103"	"0.0000"	"1"	"1"	"1"	"834.94360"	"1668.87993"	"1668.88449"	"-2.73"	"-0.00228"	"15/114"	"15"	"114"	"394616.658630371"	"HCD"	"MS2"	"0"	"33.9"	"100.000"	"60.0967"	"19424"	"19424"	"19417"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.0"	""	"38.5"	""	"50.3"	""	"49.5"	"1.3"	"71.0"	"60.7"	""	"983"	"58"	"36.000"	"29.000"	"8.08208701960139E-05"	"27"	"0"	"7.739E-05"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYDEELEER"	"[K].kYDEELEER.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"1"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"1"	"556.96490"	"1668.88016"	"1668.88449"	"-2.59"	"-0.00144"	"8/90"	"8"	"90"	"3180088.81939697"	"HCD"	"MS2"	"0"	"152.2"	"100.000"	"40.8847"	"11630"	"11630"	"11619"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"276.7"	""	"147.3"	""	"154.2"	""	"245.4"	""	"333.5"	"290.4"	""	"983"	"9"	"36.000"	"29.000"	"5.59143810982217"	"19"	"0.005183"	"0.05875"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYDEELEER"	"[K].kYDEELEER.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"1"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"556.96552"	"1668.88199"	"1668.88449"	"-1.49"	"-0.00083"	"8/90"	"8"	"90"	"5143705.04101563"	"HCD"	"MS2"	"9.24704"	"221.5"	"100.000"	"41.1804"	"11749"	"11749"	"11738"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"404.0"	""	"197.4"	""	"232.2"	""	"337.4"	""	"509.1"	"423.8"	""	"982"	"13"	"36.000"	"29.000"	"2.59466618621614"	"16"	"0.003449"	"0.03468"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAQTLYDAGEK"	"[K].dAQTLYDAGEk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"556.96558"	"1668.88218"	"1668.88449"	"-1.38"	"-0.00077"	"12/114"	"12"	"114"	"1702209.09112549"	"HCD"	"MS2"	"55.25322"	"52.6"	"100.000"	"60.2593"	"19488"	"19488"	"19473"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.9"	""	"61.6"	""	"67.7"	""	"83.0"	"0.6"	"105.3"	"109.8"	""	"980"	"30"	"36.000"	"29.000"	"0.0504889199016392"	"19"	"0"	"0.0005215"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYDEELEER"	"[K].kYDEELEER.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"1"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"556.96582"	"1668.88291"	"1668.88449"	"-0.95"	"-0.00053"	"8/90"	"8"	"90"	"3657331.70904541"	"HCD"	"MS2"	"8.914623"	"167.4"	"100.000"	"41.4153"	"11835"	"11835"	"11816"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"281.3"	""	"139.6"	""	"166.7"	""	"278.3"	"2.7"	"388.5"	"333.9"	""	"986"	"11"	"36.000"	"29.000"	"3.86230813883743"	"16"	"0.004022"	"0.0435"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYDEELEER"	"[K].kYDEELEER.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"1"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"556.96594"	"1668.88327"	"1668.88449"	"-0.73"	"-0.00040"	"8/90"	"8"	"90"	"7037570.78424072"	"HCD"	"MS2"	"0"	"303.0"	"100.000"	"41.1244"	"11717"	"11717"	"11703"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"601.9"	""	"281.0"	""	"290.9"	""	"486.4"	"0.5"	"674.8"	"538.9"	""	"973"	"16"	"36.000"	"29.000"	"1.19421588748077"	"18"	"0.003449"	"0.03452"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAQTLYDAGEK"	"[K].dAQTLYDAGEk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.8649"	"0.0000"	"1"	"1"	"1"	"556.96655"	"1668.88510"	"1668.88449"	"0.37"	"0.00021"	"10/114"	"10"	"114"	"1894104.05511475"	"HCD"	"MS2"	"37.72897"	"57.3"	"100.000"	"60.3859"	"19526"	"19526"	"19514"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"81.8"	""	"73.9"	""	"71.2"	""	"94.8"	""	"104.8"	"117.9"	""	"992"	"37"	"36.000"	"29.000"	"0.00919351685213747"	"19"	"0"	"0.0002675"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.98676"	"1668.94571"	"1668.94820"	"-1.49"	"-0.00083"	"15/138"	"15"	"138"	"1116727.51739502"	"HCD"	"MS2"	"29.95563"	"17.2"	"100.000"	"64.6120"	"21252"	"21252"	"21231"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.2"	""	"22.7"	""	"19.3"	""	"25.4"	"0.8"	"37.5"	"38.7"	""	"825"	"44"	"36.000"	"29.000"	"0.00148396600751744"	"15"	"0"	"8.428E-06"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.98688"	"1668.94608"	"1668.94820"	"-1.27"	"-0.00071"	"9/138"	"9"	"138"	"1833403.2444458"	"HCD"	"MS2"	"21.46242"	"14.3"	"100.000"	"69.2891"	"23153"	"23153"	"23129"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.9"	""	"18.9"	""	"22.4"	""	"20.4"	""	"25.4"	"25.8"	""	"818"	"67"	"36.000"	"29.000"	"7.49416598749825E-06"	"17"	"0"	"1.618E-06"	"1.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9701"	"0.0000"	"1"	"1"	"1"	"556.98700"	"1668.94645"	"1668.94820"	"-1.05"	"-0.00059"	"9/138"	"9"	"138"	"1112579.85961914"	"HCD"	"MS2"	"9.157653"	"16.0"	"100.000"	"64.6665"	"21260"	"21260"	"21239"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.4"	""	"17.2"	""	"20.0"	""	"25.7"	""	"35.0"	"38.8"	""	"847"	"67"	"36.000"	"29.000"	"9.18022688391141E-06"	"19"	"0"	"1.422E-06"	"1.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9398"	"0.0000"	"1"	"1"	"1"	"556.98712"	"1668.94681"	"1668.94820"	"-0.83"	"-0.00046"	"10/138"	"10"	"138"	"2699652.85064697"	"HCD"	"MS2"	"3.728702"	"14.7"	"100.000"	"69.9114"	"23407"	"23407"	"23390"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.2"	""	"21.2"	""	"18.1"	""	"22.7"	""	"30.1"	"28.9"	""	"837"	"83"	"36.000"	"29.000"	"2.17117816291771E-07"	"23"	"0"	"2.205E-07"	"1.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"556.98718"	"1668.94699"	"1668.94820"	"-0.72"	"-0.00040"	"10/138"	"10"	"138"	"3142697.93035889"	"HCD"	"MS2"	"2.759128"	"16.5"	"100.000"	"70.0467"	"23447"	"23447"	"23433"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.6"	""	"19.9"	""	"20.9"	""	"24.3"	""	"32.5"	"29.2"	""	"837"	"86"	"36.000"	"29.000"	"1.07819040420558E-07"	""	"0"	"7.306E-07"	"1.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.98724"	"1668.94718"	"1668.94820"	"-0.61"	"-0.00034"	"15/138"	"15"	"138"	"1814071.90393066"	"HCD"	"MS2"	"6.505714"	"13.5"	"100.000"	"69.4637"	"23210"	"23210"	"23187"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.1"	""	"17.9"	""	"18.7"	""	"18.8"	""	"30.6"	"25.6"	""	"837"	"63"	"36.000"	"29.000"	"2.28399664866697E-05"	"16"	"0"	"3.229E-06"	"1.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9773"	"0.0000"	"1"	"1"	"1"	"834.97723"	"1668.94719"	"1668.94820"	"-0.60"	"-0.00050"	"9/138"	"9"	"138"	"373269.850097656"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"69.9528"	"23423"	"23423"	"23406"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.7"	""	"19.4"	""	"23.8"	""	"22.9"	""	"29.2"	"32.9"	""	"837"	"44"	"36.000"	"29.000"	"0.00166224663452961"	"16"	"0"	"0.0004202"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9783"	"0.0000"	"1"	"1"	"1"	"834.97723"	"1668.94719"	"1668.94820"	"-0.60"	"-0.00050"	"7/138"	"7"	"138"	"389814.971557617"	"HCD"	"MS2"	"0"	"14.4"	"100.000"	"64.5774"	"21238"	"21238"	"21215"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.8"	""	"21.8"	""	"20.2"	""	"23.9"	""	"22.9"	"24.7"	""	"837"	"46"	"36.000"	"29.000"	"0.00104880672239394"	"16"	"0"	"9.403E-05"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8983"	"0.0000"	"1"	"1"	"1"	"834.97748"	"1668.94768"	"1668.94820"	"-0.31"	"-0.00026"	"12/138"	"12"	"138"	"675072.204406738"	"HCD"	"MS2"	"2.492691"	"23.3"	"100.000"	"70.0490"	"23448"	"23448"	"23433"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.8"	""	"38.5"	""	"28.3"	""	"35.9"	""	"44.8"	"42.4"	""	"830"	"59"	"36.000"	"29.000"	"5.70227419630195E-05"	"22"	"0"	"2.961E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9104"	"0.0000"	"1"	"1"	"1"	"834.97748"	"1668.94768"	"1668.94820"	"-0.31"	"-0.00026"	"13/138"	"13"	"138"	"721810.281616211"	"HCD"	"MS2"	"0"	"24.6"	"100.000"	"69.3283"	"23169"	"23169"	"23145"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.6"	""	"37.2"	""	"30.6"	""	"30.9"	"0.6"	"52.4"	"43.0"	""	"830"	"67"	"36.000"	"29.000"	"8.0918550889959E-06"	"23"	"0"	"6.59E-07"	"1.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.98743"	"1668.94773"	"1668.94820"	"-0.28"	"-0.00016"	"15/138"	"15"	"138"	"378990.459106445"	"HCD"	"MS2"	"18.49865"	"11.5"	"100.000"	"70.3744"	"23581"	"23581"	"23557"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.4"	""	"17.7"	""	"13.5"	""	"20.1"	""	"21.4"	"23.2"	""	"825"	"44"	"36.000"	"29.000"	"0.0017394980766429"	"15"	"0"	"8.728E-06"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.97766"	"1668.94805"	"1668.94820"	"-0.09"	"-0.00008"	"6/138"	"6"	"138"	"390750.525878906"	"HCD"	"MS2"	"0"	"14.7"	"100.000"	"64.6644"	"21259"	"21259"	"21239"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.2"	""	"21.6"	""	"18.3"	""	"23.3"	""	"26.0"	"24.3"	""	"825"	"39"	"36.000"	"29.000"	"0.00581331629349023"	"15"	"0"	"0.000186"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8983"	"0.0000"	"1"	"1"	"1"	"834.97784"	"1668.94841"	"1668.94820"	"0.13"	"0.00011"	"11/138"	"11"	"138"	"489522.321472168"	"HCD"	"MS2"	"0"	"17.7"	"100.000"	"69.4660"	"23211"	"23211"	"23187"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.8"	""	"19.4"	""	"19.9"	""	"25.6"	""	"36.8"	"32.3"	""	"822"	"59"	"36.000"	"29.000"	"5.36836235022187E-05"	"22"	"0"	"4.721E-06"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9206"	"0.0000"	"1"	"1"	"1"	"834.97784"	"1668.94841"	"1668.94820"	"0.13"	"0.00011"	"12/138"	"12"	"138"	"4303017.54846191"	"HCD"	"MS2"	"0"	"117.4"	"100.000"	"69.7471"	"23325"	"23325"	"23314"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"201.1"	""	"165.0"	""	"152.1"	""	"163.0"	"0.2"	"223.6"	"206.3"	""	"822"	"63"	"36.000"	"29.000"	"2.01299094760431E-05"	"22"	"0"	"4.193E-06"	"0.985"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"556.98773"	"1668.94864"	"1668.94820"	"0.26"	"0.00015"	"10/138"	"10"	"138"	"17937273.607605"	"HCD"	"MS2"	"1.89809"	"30.5"	"62.060"	"69.5980"	"23279"	"23279"	"23262"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.3"	""	"41.0"	""	"40.8"	""	"46.9"	""	"56.6"	"53.6"	""	"823"	"78"	"36.000"	"29.000"	"7.00438226204522E-07"	"27"	"0"	"9.088E-07"	"1.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"834.97827"	"1668.94927"	"1668.94820"	"0.64"	"0.00053"	"11/138"	"11"	"138"	"4426543.52661133"	"HCD"	"MS2"	"0"	"121.1"	"100.000"	"69.6372"	"23295"	"23295"	"23278"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"199.7"	""	"169.1"	""	"155.2"	""	"181.6"	"2.3"	"224.0"	"214.8"	""	"804"	"70"	"36.000"	"29.000"	"4.37749897520041E-06"	"22"	"0"	"6.176E-06"	"0.948"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9277"	"0.0000"	"1"	"1"	"1"	"556.98798"	"1668.94937"	"1668.94820"	"0.70"	"0.00039"	"10/138"	"10"	"138"	"16793989.4156494"	"HCD"	"MS2"	"1.723422"	"35.7"	"67.192"	"69.7427"	"23324"	"23324"	"23314"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.6"	""	"53.4"	""	"44.2"	""	"52.4"	""	"70.2"	"56.2"	""	"805"	"83"	"36.000"	"29.000"	"2.07379529444157E-07"	"23"	"0"	"3.339E-07"	"1.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSFDSTPASSTDGR"	"[K].lSFDSTPASSTDGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"A1A5P0"	"Cdc42 effector protein 1 OS=Rattus norvegicus OX=10116 GN=Cdc42ep1 PE=1 SV=1"	"A1A5P0"	"Cdc42 effector protein 1 OS=Rattus norvegicus OX=10116 GN=Cdc42ep1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"835.41443"	"1669.82158"	"1669.82306"	"-0.89"	"-0.00074"	"4/124"	"4"	"124"	"125962.613220215"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"61.5542"	"20014"	"20014"	"19985"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.3"	""	"7.1"	""	"12.0"	""	"18.8"	""	"19.8"	"20.6"	""	"730"	"6"	"35.000"	"28.000"	"8.7759242200253"	"13"	"0.002937"	"0.02762"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPqVSTPTLVEAAR.[N]"	"N-Term(TMT6plex); Q3(Deamidated)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8814"	"0.0000"	"1"	"1"	"1"	"557.31458"	"1669.92917"	"1669.93222"	"-1.82"	"-0.00101"	"9/138"	"9"	"138"	"1770629.98175049"	"HCD"	"MS2"	"21.51697"	"23.8"	"100.000"	"71.9787"	"24248"	"24248"	"24230"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.4"	""	"34.5"	""	"33.1"	""	"39.8"	""	"42.9"	"41.8"	""	"935"	"59"	"36.000"	"29.000"	"5.28179590109533E-05"	"23"	"0"	"1.108E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPqVSTPTLVEAAR.[N]"	"N-Term(TMT6plex); Q3(Deamidated)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8868"	"0.0000"	"1"	"1"	"1"	"557.31519"	"1669.93100"	"1669.93222"	"-0.73"	"-0.00040"	"13/138"	"13"	"138"	"1809942.03186035"	"HCD"	"MS2"	"18.90048"	"22.6"	"100.000"	"72.1003"	"24284"	"24284"	"24266"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.3"	""	"30.4"	""	"31.2"	""	"37.2"	"1.4"	"41.5"	"40.4"	""	"916"	"53"	"36.000"	"29.000"	"0.000241471276531653"	"22"	"0"	"1.77E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPqVSTPTLVEAAR.[N]"	"N-Term(TMT6plex); Q3(Deamidated)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"835.46942"	"1669.93157"	"1669.93222"	"-0.39"	"-0.00033"	"7/138"	"7"	"138"	"420723.229431152"	"HCD"	"MS2"	"0"	"20.0"	"100.000"	"72.2553"	"24361"	"24361"	"24341"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.4"	""	"33.7"	""	"34.6"	""	"23.3"	""	"31.0"	"24.2"	""	"914"	"49"	"36.000"	"29.000"	"0.000638140341002564"	"16"	"0"	"1.784E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPqVSTPTLVEAAR.[N]"	"N-Term(TMT6plex); Q3(Deamidated)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"835.46954"	"1669.93181"	"1669.93222"	"-0.24"	"-0.00020"	"6/138"	"6"	"138"	"333839.064758301"	"HCD"	"MS2"	"0"	"16.9"	"100.000"	"71.9511"	"24237"	"24237"	"24214"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.4"	""	"27.6"	""	"25.7"	""	"20.0"	""	"26.1"	"24.9"	""	"908"	"36"	"36.000"	"29.000"	"0.0125041983131553"	"15"	"0"	"0.001884"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPqVSTPTLVEAAR.[N]"	"N-Term(TMT6plex); Q3(Deamidated)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9400"	"0.0000"	"1"	"1"	"1"	"835.46979"	"1669.93230"	"1669.93222"	"0.05"	"0.00004"	"11/138"	"11"	"138"	"433312.305664063"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"72.3769"	"24397"	"24397"	"24378"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.9"	""	"32.7"	""	"34.1"	""	"15.6"	""	"27.8"	"19.2"	""	"906"	"50"	"36.000"	"29.000"	"0.00044370896339014"	"19"	"0"	"3.246E-05"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPqVSTPTLVEAAR.[N]"	"N-Term(TMT6plex); Q3(Deamidated)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9796"	"0.0000"	"1"	"1"	"1"	"835.46985"	"1669.93242"	"1669.93222"	"0.12"	"0.00010"	"7/138"	"7"	"138"	"357800.200805664"	"HCD"	"MS2"	"8.059907"	"16.9"	"100.000"	"72.0864"	"24279"	"24279"	"24250"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.5"	""	"28.9"	""	"25.2"	""	"19.9"	""	"24.2"	"24.3"	""	"905"	"49"	"36.000"	"29.000"	"0.00062750701256453"	"16"	"0"	"0.0001675"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTSSPPGQTQFK"	"[R].nFTSSPPGqTqFK.[V]"	"N-Term(TMT6plex); N1(Deamidated); Q9(Deamidated); Q11(Deamidated)"	"1"	"1"	"Q566E5"	"Protein O-glucosyltransferase 3 OS=Rattus norvegicus OX=10116 GN=Kdelc2 PE=2 SV=1"	"Q566E5"	"Protein O-glucosyltransferase 3 OS=Rattus norvegicus OX=10116 GN=Kdelc2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"835.90765"	"1670.80803"	"1670.81110"	"-1.84"	"-0.00153"	"3/134"	"3"	"134"	"53787.8373413086"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"82.3366"	"28423"	"28423"	"28409"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.9"	""	"3.0"	""	"7.0"	""	"6.3"	""	"6.3"	"7.2"	""	"608"	"10"	"34.000"	"27.000"	"3.16135730412034"	"13"	"0.005874"	"0.06685"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDTATVNLSPGDPR"	"[R].vDTATVNLSPGDPR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9024"	"0.0000"	"1"	"1"	"1"	"557.63440"	"1670.88864"	"1670.89108"	"-1.46"	"-0.00081"	"10/138"	"10"	"138"	"982693.922180176"	"HCD"	"MS2"	"18.9856"	"16.8"	"100.000"	"64.3988"	"21151"	"21151"	"21131"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.4"	""	"22.9"	""	"23.9"	""	"29.7"	""	"28.1"	"33.7"	""	"1005"	"41"	"37.000"	"30.000"	"0.0043765920395293"	"19"	"0"	"0.0001417"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDTATVNLSPGDPR"	"[R].vDTATVNLSPGDPR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8864"	"0.0000"	"1"	"1"	"1"	"557.63452"	"1670.88901"	"1670.89108"	"-1.24"	"-0.00069"	"13/138"	"13"	"138"	"927090.371826172"	"HCD"	"MS2"	"29.42264"	"13.7"	"100.000"	"64.2752"	"21115"	"21115"	"21097"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.2"	""	"16.7"	""	"15.7"	""	"26.1"	""	"24.8"	"28.6"	""	"1012"	"44"	"37.000"	"30.000"	"0.0021239804589945"	"21"	"0"	"9.818E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDTATVNLSPGDPR"	"[R].vDTATVNLSPGDPR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8557"	"0.0000"	"1"	"1"	"1"	"835.94818"	"1670.88909"	"1670.89108"	"-1.19"	"-0.00100"	"10/138"	"10"	"138"	"212104.635314941"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"64.3365"	"21126"	"21126"	"21099"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.5"	""	"9.2"	""	"8.3"	""	"11.6"	""	"15.2"	"17.2"	""	"1014"	"97"	"37.000"	"30.000"	"1.11945839964058E-08"	""	"0"	"7.857E-07"	"1.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDTATVNLSPGDPR"	"[R].vDTATVNLSPGDPR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"835.94904"	"1670.89079"	"1670.89108"	"-0.17"	"-0.00014"	"7/138"	"7"	"138"	"205517.266723633"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"64.2475"	"21104"	"21104"	"21081"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.4"	""	"10.6"	""	"10.0"	""	"14.7"	""	"21.7"	"19.3"	""	"1013"	"40"	"37.000"	"30.000"	"0.005592158209804"	"21"	"0"	"0.0003723"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIEVNGQNVEGLR"	"[R].lIEVnGQNVEGLR.[H]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"835.96716"	"1670.92705"	"1670.92747"	"-0.25"	"-0.00021"	"7/126"	"7"	"126"	"70298.8514404297"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"87.1645"	"30317"	"30317"	"30307"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.7"	""	"6.7"	""	"4.2"	""	"4.4"	""	"6.1"	"7.4"	""	"934"	"7"	"36.000"	"29.000"	"10.0534907011628"	"13"	"0.007413"	"0.08863"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIEVNGQNVEGLR"	"[R].lIEVnGQNVEGLR.[H]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"835.96777"	"1670.92827"	"1670.92747"	"0.48"	"0.00040"	"4/126"	"4"	"126"	"92364.6722412109"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"87.1806"	"30330"	"30330"	"30321"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.4"	""	"5.1"	""	"6.4"	""	"5.0"	""	"7.2"	"9.1"	""	"934"	"16"	"36.000"	"29.000"	"1.15429517572253"	"14"	"0.0002479"	"0.005828"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYTPGIGGDPAQLAQR"	"[M].sYTPGIGGDPAQLAQR.[I]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"O70257"	"Syntaxin-7 OS=Rattus norvegicus OX=10116 GN=Stx7 PE=1 SV=4"	"O70257"	"Syntaxin-7 OS=Rattus norvegicus OX=10116 GN=Stx7 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"836.91815"	"1672.82903"	"1672.82892"	"0.06"	"0.00005"	"5/144"	"5"	"144"	"78625.7517700195"	"HCD"	"MS2"	"0"	"0.9"	"100.000"	"84.4586"	"29260"	"29260"	"29241"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.2"	""	""	""	"2.6"	""	""	""	""	"3.9"	"NoQuanLabels"	"694"	"15"	"35.000"	"28.000"	"1.03592776876453"	"13"	"0.004431"	"0.04642"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGAPENSGISTLER"	"[R].lGAPENSGISTLER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LYQ8"	"FERM, ARHGEF and pleckstrin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Farp1 PE=1 SV=2"	"F1LYQ8"	"FERM, ARHGEF and pleckstrin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Farp1 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"836.95709"	"1672.90691"	"1672.90673"	"0.11"	"0.00009"	"5/136"	"5"	"136"	"187691.864379883"	"HCD"	"MS2"	"19.01683"	"12.2"	"100.000"	"68.9920"	"23032"	"23032"	"23007"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.7"	""	"11.3"	""	"15.2"	""	"26.2"	""	"22.4"	"27.8"	""	"1015"	"8"	"37.000"	"30.000"	"8.73848301805398"	"16"	"0.001635"	"0.0196"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGAPENSGISTLER"	"[R].lGAPENSGISTLER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LYQ8"	"FERM, ARHGEF and pleckstrin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Farp1 PE=1 SV=2"	"F1LYQ8"	"FERM, ARHGEF and pleckstrin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Farp1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"836.95825"	"1672.90923"	"1672.90673"	"1.49"	"0.00125"	"6/136"	"6"	"136"	"221716.606140137"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"69.1663"	"23089"	"23089"	"23059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.1"	""	"17.7"	""	"15.8"	""	"26.7"	""	"21.9"	"27.3"	""	"973"	"10"	"36.000"	"29.000"	"5.33436642423659"	"13"	"0.003111"	"0.03114"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLLGPDENSK"	"[K].nQLLGPDENSk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"2"	"2"	"0.4054"	"0.0000"	"1"	"1"	"1"	"836.96655"	"1672.92583"	"1672.92702"	"-0.71"	"-0.00060"	"13/106"	"13"	"106"	"219936.321411133"	"HCD"	"MS2"	"0"	"17.4"	"100.000"	"53.6481"	"16826"	"16826"	"16796"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.8"	""	"22.6"	""	"28.2"	""	"32.7"	""	"24.0"	"28.8"	""	"1019"	"37"	"37.000"	"30.000"	"0.0113538770855322"	""	"0"	"0.00168"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLLGPDENSK"	"[K].nQLLGPDENSk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"2"	"2"	"0.6275"	"0.0000"	"1"	"1"	"1"	"836.96710"	"1672.92693"	"1672.92702"	"-0.06"	"-0.00005"	"9/106"	"9"	"106"	"253289.989990234"	"HCD"	"MS2"	"0"	"21.5"	"100.000"	"53.9177"	"16925"	"16925"	"16896"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.0"	""	"28.2"	""	"28.8"	""	"38.5"	""	"38.1"	"32.6"	""	"1003"	"51"	"37.000"	"30.000"	"0.000425864008230712"	""	"0"	"0.000121"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPGSEETQTLVR"	"[K].lDPGSEETQTLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.6222"	"0.0000"	"1"	"1"	"1"	"837.44830"	"1673.88933"	"1673.89075"	"-0.85"	"-0.00071"	"18/120"	"18"	"120"	"507763.835144043"	"HCD"	"MS2"	"0"	"24.3"	"100.000"	"66.0199"	"21821"	"21821"	"21796"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.1"	""	"26.9"	""	"31.8"	""	"38.7"	"0.5"	"48.4"	"42.7"	""	"962"	"45"	"36.000"	"29.000"	"0.00149329316188974"	""	"0"	"0.0004607"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPGSEETQTLVR"	"[K].lDPGSEETQTLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"837.44867"	"1673.89006"	"1673.89075"	"-0.41"	"-0.00034"	"19/120"	"19"	"120"	"499032.055664063"	"HCD"	"MS2"	"5.32173"	"25.4"	"100.000"	"66.1023"	"21839"	"21839"	"21816"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.4"	""	"29.6"	""	"27.1"	""	"43.6"	""	"50.0"	"52.0"	""	"964"	"57"	"36.000"	"29.000"	"0.000104243032843642"	""	"0"	"3.553E-05"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIEDGSGEAVLSR"	"[R].vLIEDGSGEAVLSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"837.46637"	"1673.92546"	"1673.92713"	"-1.00"	"-0.00083"	"10/122"	"10"	"122"	"165460.124633789"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"81.7849"	"28203"	"28203"	"28180"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.7"	""	"14.9"	""	"13.9"	""	"15.6"	""	"13.6"	"15.4"	""	"1033"	"33"	"37.000"	"30.000"	"0.0247212442684643"	"17"	"0"	"0.0004761"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIEDGSGEAVLSR"	"[R].vLIEDGSGEAVLSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9529"	"0.0000"	"1"	"1"	"1"	"837.46637"	"1673.92546"	"1673.92713"	"-1.00"	"-0.00083"	"13/122"	"13"	"122"	"989088.209960938"	"HCD"	"MS2"	"0"	"43.4"	"100.000"	"82.0892"	"28325"	"28325"	"28311"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.5"	""	"58.9"	""	"46.7"	""	"83.7"	""	"81.4"	"79.6"	""	"1033"	"85"	"37.000"	"30.000"	"1.66751721386458E-07"	"21"	"0"	"1.779E-08"	"1.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIEDGSGEAVLSR"	"[R].vLIEDGSGEAVLSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9878"	"0.0000"	"1"	"1"	"1"	"837.46655"	"1673.92583"	"1673.92713"	"-0.78"	"-0.00065"	"12/122"	"12"	"122"	"775745.47857666"	"HCD"	"MS2"	"2.725645"	"34.5"	"100.000"	"82.0355"	"28300"	"28300"	"28287"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.6"	""	"46.0"	""	"38.5"	""	"77.7"	""	"57.8"	"64.3"	""	"1020"	"82"	"37.000"	"30.000"	"3.58566883140755E-07"	"18"	"0"	"1.546E-07"	"1.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIEDGSGEAVLSR"	"[R].vLIEDGSGEAVLSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9111"	"0.0000"	"1"	"1"	"1"	"558.64703"	"1673.92655"	"1673.92713"	"-0.35"	"-0.00019"	"17/122"	"17"	"122"	"1323181.48419189"	"HCD"	"MS2"	"13.01029"	"13.0"	"100.000"	"81.9231"	"28258"	"28258"	"28245"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.6"	""	"17.2"	""	"14.4"	""	"20.2"	""	"25.9"	"25.7"	""	"1022"	"90"	"37.000"	"30.000"	"5.21700076174625E-08"	"26"	"0"	"1.883E-07"	"1.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIEDGSGEAVLSR"	"[R].vLIEDGSGEAVLSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"837.46698"	"1673.92668"	"1673.92713"	"-0.27"	"-0.00022"	"7/122"	"7"	"122"	"155054.253540039"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"81.7265"	"28177"	"28177"	"28155"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.0"	""	"8.6"	""	"7.3"	""	"13.3"	""	"13.1"	"14.5"	""	"1019"	"40"	"37.000"	"30.000"	"0.00566427315049971"	"15"	"0"	"0.0001933"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIEDGSGEAVLSR"	"[R].vLIEDGSGEAVLSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9381"	"0.0000"	"1"	"1"	"1"	"558.64709"	"1673.92673"	"1673.92713"	"-0.24"	"-0.00013"	"17/122"	"17"	"122"	"1190692.91204834"	"HCD"	"MS2"	"18.10886"	"12.3"	"100.000"	"81.8716"	"28234"	"28234"	"28218"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.8"	""	"14.3"	""	"19.2"	""	"20.5"	""	"25.3"	"22.2"	""	"1017"	"97"	"37.000"	"30.000"	"1.08465333833504E-08"	"25"	"0"	"1.3E-07"	"1.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EKEPIAASTNR"	"[R].ekEPIAASTNR.[G]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"558.65796"	"1673.95932"	"1673.95865"	"0.40"	"0.00022"	"6/114"	"6"	"114"	"1843382.50286865"	"HCD"	"MS2"	"0"	"94.8"	"100.000"	"30.1162"	"7252"	"7252"	"7234"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"137.1"	""	"99.4"	""	"106.7"	""	"155.9"	""	"192.7"	"216.5"	""	"924"	"2"	"36.000"	"29.000"	"32.7070952385472"	"13"	"0.006061"	"0.06972"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDETMYVESK"	"[R].dDETMYVESk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"837.91772"	"1674.82817"	"1674.82967"	"-0.90"	"-0.00075"	"16/88"	"16"	"88"	"624446.023071289"	"HCD"	"MS2"	"0"	"62.7"	"100.000"	"59.3869"	"19149"	"19149"	"19126"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.5"	""	"49.9"	""	"62.0"	""	"84.0"	""	"149.9"	"146.5"	""	"678"	"57"	"35.000"	"28.000"	"6.07015384517965E-05"	"23"	"0"	"4.781E-05"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDETMYVESK"	"[R].dDETMYVESk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"837.91846"	"1674.82964"	"1674.82967"	"-0.02"	"-0.00002"	"8/88"	"8"	"88"	"436040.857910156"	"HCD"	"MS2"	"0"	"44.0"	"100.000"	"59.1064"	"19050"	"19050"	"19021"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"75.1"	""	"37.5"	""	"42.4"	""	"61.6"	"0.5"	"101.6"	"99.9"	""	"681"	"54"	"35.000"	"28.000"	"0.000126507745507587"	"23"	"0"	"4.26E-05"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQGEADDLEIK"	"[R].vQGEADDLEIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P24587"	"A-kinase anchor protein 5 OS=Rattus norvegicus OX=10116 GN=Akap5 PE=1 SV=2"	"P24587"	"A-kinase anchor protein 5 OS=Rattus norvegicus OX=10116 GN=Akap5 PE=1 SV=2"	"0"	"2"	"2"	"0.7612"	"0.0000"	"1"	"1"	"1"	"837.96942"	"1674.93157"	"1674.93144"	"0.08"	"0.00006"	"9/108"	"9"	"108"	"286241.778808594"	"HCD"	"MS2"	"9.33027"	"26.8"	"100.000"	"71.3193"	"23980"	"23980"	"23962"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.7"	""	"17.9"	""	"23.8"	""	"85.4"	"1.0"	"64.1"	"41.1"	""	"1067"	"67"	"37.000"	"30.000"	"1.18340778996342E-05"	""	"0"	"2.233E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RESSADILTEIGR"	"[K].rESSADILTEIGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"1"	"3"	"3"	"0.5588"	"0.0000"	"1"	"1"	"1"	"559.30927"	"1675.91324"	"1675.91763"	"-2.62"	"-0.00146"	"8/136"	"8"	"136"	"867068.009643555"	"HCD"	"MS2"	"6.97377"	"20.9"	"100.000"	"64.7748"	"21300"	"21300"	"21271"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.0"	""	"24.5"	""	"32.6"	""	"36.0"	""	"35.0"	"40.2"	""	"1115"	"34"	"37.000"	"30.000"	"0.0241126460802017"	"29"	"0"	"4.087E-05"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RESSADILTEIGR"	"[K].rESSADILTEIGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"1"	"3"	"3"	"0.7632"	"0.0000"	"1"	"1"	"1"	"559.30981"	"1675.91489"	"1675.91763"	"-1.63"	"-0.00091"	"10/136"	"10"	"136"	"1145856.35614014"	"HCD"	"MS2"	"19.99827"	"25.3"	"100.000"	"64.7364"	"21299"	"21299"	"21279"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.3"	""	"33.5"	""	"33.5"	""	"42.1"	""	"38.6"	"52.4"	""	"1102"	"38"	"37.000"	"30.000"	"0.00861294351095165"	"24"	"0"	"3.054E-05"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTDENVSDNWR"	"[K].lVTDENVSDNWR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"3"	"3"	"0.7949"	"0.0000"	"1"	"1"	"1"	"559.61914"	"1676.84287"	"1676.84413"	"-0.75"	"-0.00042"	"10/112"	"10"	"112"	"1546184.58129883"	"HCD"	"MS2"	"64.59022"	"23.0"	"100.000"	"75.0574"	"25492"	"25492"	"25476"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.2"	""	"37.1"	""	"31.4"	""	"41.8"	""	"33.4"	"35.8"	""	"817"	"39"	"36.000"	"29.000"	"0.00520226008595306"	"23"	"0"	"0.0006756"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTDENVSDNWR"	"[K].lVTDENVSDNWR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"2"	"2"	"0.8909"	"0.0000"	"1"	"1"	"1"	"838.92517"	"1676.84307"	"1676.84413"	"-0.63"	"-0.00053"	"10/112"	"10"	"112"	"498412.255493164"	"HCD"	"MS2"	"0"	"29.4"	"100.000"	"75.1268"	"25520"	"25520"	"25502"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.1"	""	"37.1"	""	"41.8"	""	"51.5"	""	"54.8"	"47.2"	""	"823"	"55"	"36.000"	"29.000"	"0.000122848494768474"	"22"	"0"	"3.368E-06"	"1.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTDENVSDNWR"	"[K].lVTDENVSDNWR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"559.61951"	"1676.84397"	"1676.84413"	"-0.10"	"-0.00005"	"10/112"	"10"	"112"	"1254748.75793457"	"HCD"	"MS2"	"66.848"	"22.8"	"100.000"	"75.2337"	"25552"	"25552"	"25534"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.1"	""	"35.8"	""	"29.2"	""	"34.3"	""	"43.7"	"37.2"	""	"834"	"44"	"36.000"	"29.000"	"0.00152102395867978"	"23"	"0"	"0.001126"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTDENVSDNWR"	"[K].lVTDENVSDNWR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"2"	"2"	"0.8906"	"0.0000"	"1"	"1"	"1"	"838.92566"	"1676.84404"	"1676.84413"	"-0.05"	"-0.00004"	"9/112"	"9"	"112"	"530615.729614258"	"HCD"	"MS2"	"0"	"30.2"	"100.000"	"75.2615"	"25564"	"25564"	"25547"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.7"	""	"44.1"	""	"50.9"	""	"42.2"	""	"53.4"	"53.0"	""	"834"	"64"	"36.000"	"29.000"	"1.81608451326882E-05"	"23"	"0"	"5.461E-07"	"1.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTDENVSDNWR"	"[K].lVTDENVSDNWR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"838.92627"	"1676.84526"	"1676.84413"	"0.68"	"0.00057"	"6/112"	"6"	"112"	"227377.822143555"	"HCD"	"MS2"	"0"	"14.6"	"100.000"	"74.9499"	"25438"	"25438"	"25409"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.6"	""	"24.4"	""	"22.8"	""	"23.0"	""	"26.2"	"22.5"	""	"836"	"34"	"36.000"	"29.000"	"0.0180374974114006"	"17"	"0"	"0.002912"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTDENVSDNWR"	"[K].lVTDENVSDNWR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"2"	"2"	"0.6604"	"0.0000"	"1"	"1"	"1"	"838.92651"	"1676.84575"	"1676.84413"	"0.97"	"0.00081"	"7/112"	"7"	"112"	"270377.52923584"	"HCD"	"MS2"	"0"	"16.4"	"100.000"	"74.8201"	"25402"	"25402"	"25384"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.6"	""	"25.6"	""	"22.7"	""	"26.9"	""	"27.9"	"29.3"	""	"853"	"53"	"36.000"	"29.000"	"0.000208890666460642"	""	"0"	"6.933E-05"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQLLVSEEPLHAR"	"[R].gQLLVSEEPLHAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.98755"	"1677.94809"	"1677.94853"	"-0.26"	"-0.00015"	"9/122"	"9"	"122"	"1567695.92626953"	"HCD"	"MS2"	"18.22256"	"33.2"	"100.000"	"59.1199"	"19040"	"19040"	"19016"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.1"	""	"35.7"	""	"36.1"	""	"57.1"	""	"75.7"	"82.4"	""	"1031"	"42"	"37.000"	"30.000"	"0.00314940613838822"	"15"	"0"	"7.706E-06"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEAPDYMYLR"	"[R].fEEAPDYmYLR.[Q]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P97633"	"Casein kinase I isoform alpha OS=Rattus norvegicus OX=10116 GN=Csnk1a1 PE=2 SV=1"	"P97633"	"Casein kinase I isoform alpha OS=Rattus norvegicus OX=10116 GN=Csnk1a1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"839.90192"	"1678.79656"	"1678.79843"	"-1.11"	"-0.00093"	"5/88"	"5"	"88"	"111827.762268066"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"83.8669"	"29022"	"29022"	"29002"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.8"	""	"6.5"	""	"12.8"	""	"7.5"	""	"8.5"	"9.3"	""	"495"	"17"	"33.000"	"26.000"	"0.531588042347307"	"14"	"0.002379"	"0.02454"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEAPDYMYLR"	"[R].fEEAPDYmYLR.[Q]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P97633"	"Casein kinase I isoform alpha OS=Rattus norvegicus OX=10116 GN=Csnk1a1 PE=2 SV=1"	"P97633"	"Casein kinase I isoform alpha OS=Rattus norvegicus OX=10116 GN=Csnk1a1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"839.90192"	"1678.79656"	"1678.79843"	"-1.11"	"-0.00093"	"5/88"	"5"	"88"	"103155.401000977"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"83.8209"	"29006"	"29006"	"28985"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.1"	""	"8.3"	""	"6.5"	""	"5.9"	""	"7.0"	"7.3"	""	"495"	"10"	"33.000"	"26.000"	"2.65201028046308"	"13"	"0.00379"	"0.0389"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNSTMGYMAAK"	"[R].dNSTmGYmAAk.[K]"	"N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"839.91180"	"1678.81633"	"1678.81806"	"-1.03"	"-0.00087"	"14/104"	"14"	"104"	"238968.089477539"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"35.2672"	"9349"	"9349"	"9318"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.5"	""	"14.6"	""	"22.0"	""	"34.8"	""	"22.4"	"24.3"	""	"620"	"23"	"34.000"	"27.000"	"0.141046298646515"	"14"	"0.008437"	"0.1003"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNSTMGYMAAK"	"[R].dNSTmGYmAAk.[K]"	"N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"839.91284"	"1678.81841"	"1678.81806"	"0.20"	"0.00017"	"12/104"	"12"	"104"	"185735.141113281"	"HCD"	"MS2"	"0"	"13.4"	"100.000"	"35.4895"	"9434"	"9434"	"9410"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.5"	""	"13.5"	""	"15.4"	""	"40.4"	""	"23.1"	"15.7"	""	"642"	"18"	"35.000"	"28.000"	"0.551448592277586"	"15"	"0.00379"	"0.039"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEPLNFEGSEK"	"[K].aEPLNFEGSEk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AXR4"	"Beta-hexosaminidase subunit beta OS=Rattus norvegicus OX=10116 GN=Hexb PE=2 SV=1"	"Q6AXR4"	"Beta-hexosaminidase subunit beta OS=Rattus norvegicus OX=10116 GN=Hexb PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"839.95557"	"1678.90386"	"1678.90522"	"-0.81"	"-0.00068"	"11/108"	"11"	"108"	"189008.677246094"	"HCD"	"MS2"	"21.23871"	"16.6"	"100.000"	"68.5761"	"22848"	"22848"	"22821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.6"	""	"21.5"	""	"22.8"	""	"22.1"	""	"30.6"	"28.1"	""	"1020"	"31"	"37.000"	"30.000"	"0.0423223891432356"	"14"	"0.0002479"	"0.005036"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALVDQAEEFSGR"	"[K].eALVDQAEEFSGR.[G]"	"N-Term(TMT6plex)"	"1"	"3"	"P20812"	"Cytochrome P450 2A3 OS=Rattus norvegicus OX=10116 GN=Cyp2a3 PE=2 SV=1"	"P11711; P20812; P15149"	"Cytochrome P450 2A1 OS=Rattus norvegicus OX=10116 GN=Cyp2a1 PE=1 SV=2; Cytochrome P450 2A3 OS=Rattus norvegicus OX=10116 GN=Cyp2a3 PE=2 SV=1; Cytochrome P450 2A2 OS=Rattus norvegicus OX=10116 GN=Cyp2a2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"840.42389"	"1679.84050"	"1679.84379"	"-1.96"	"-0.00165"	"5/130"	"5"	"130"	"81776.7730102539"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"81.5150"	"28092"	"28092"	"28065"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.3"	""	"3.5"	""	"4.7"	""	"3.7"	""	"11.2"	"7.3"	""	"853"	"6"	"36.000"	"29.000"	"10.8372485891678"	"13"	"0.009021"	"0.1162"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEQEYVQAVK"	"[K].qEQEYVQAVk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"840.47162"	"1679.93596"	"1679.93686"	"-0.53"	"-0.00045"	"11/94"	"11"	"94"	"345381.84954834"	"HCD"	"MS2"	"0"	"30.1"	"100.000"	"55.4812"	"17571"	"17571"	"17543"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.9"	""	"30.3"	""	"29.7"	""	"63.5"	""	"62.6"	"72.9"	""	"991"	"31"	"36.000"	"29.000"	"0.037674167022386"	"20"	"0"	"0.000806"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEQEYVQAVK"	"[K].qEQEYVQAVk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"840.47168"	"1679.93608"	"1679.93686"	"-0.46"	"-0.00039"	"8/94"	"8"	"94"	"274696.377807617"	"HCD"	"MS2"	"0"	"22.4"	"100.000"	"55.6283"	"17617"	"17617"	"17586"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.4"	""	"21.3"	""	"21.0"	""	"45.2"	"0.3"	"47.0"	"53.1"	""	"991"	"46"	"36.000"	"29.000"	"0.00122473931385549"	"21"	"0"	"0.0001877"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFLDGDAWTNR"	"[K].eQFLDGDAWTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"840.91156"	"1680.81584"	"1680.81791"	"-1.23"	"-0.00104"	"7/126"	"7"	"126"	"98005.5115966797"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"85.5788"	"29697"	"29697"	"29687"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.3"	""	"6.9"	""	"8.9"	""	"4.0"	""	"8.1"	"8.6"	""	"692"	"41"	"35.000"	"28.000"	"0.00263679337468793"	"23"	"0"	"0.001604"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFLDGDAWTNR"	"[K].eQFLDGDAWTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"560.94360"	"1680.81626"	"1680.81791"	"-0.99"	"-0.00055"	"12/126"	"12"	"126"	"607541.000671387"	"HCD"	"MS2"	"27.40664"	"13.3"	"100.000"	"85.0492"	"29493"	"29493"	"29480"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.9"	""	"18.7"	""	"15.4"	""	"21.5"	"1.2"	"23.6"	"25.2"	""	"708"	"30"	"35.000"	"28.000"	"0.0369830957604163"	"23"	"0"	"0.0004614"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFLDGDAWTNR"	"[K].eQFLDGDAWTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"3"	"3"	"0.6857"	"0.0000"	"1"	"1"	"1"	"560.94366"	"1680.81644"	"1680.81791"	"-0.88"	"-0.00049"	"12/126"	"12"	"126"	"703557.637390137"	"HCD"	"MS2"	"20.76548"	"12.2"	"100.000"	"85.1070"	"29516"	"29516"	"29495"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.8"	""	"14.6"	""	"17.0"	""	"17.7"	""	"28.2"	"19.8"	""	"708"	"35"	"35.000"	"28.000"	"0.0125315058743536"	"25"	"0"	"0.0005442"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFLDGDAWTNR"	"[K].eQFLDGDAWTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"3"	"3"	"0.4808"	"0.0000"	"1"	"1"	"1"	"560.94379"	"1680.81681"	"1680.81791"	"-0.66"	"-0.00037"	"12/126"	"12"	"126"	"1608041.97241211"	"HCD"	"MS2"	"3.479817"	"14.8"	"100.000"	"85.3763"	"29618"	"29618"	"29610"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.3"	""	"18.7"	""	"25.0"	""	"22.4"	"2.5"	"27.6"	"23.6"	""	"707"	"52"	"35.000"	"28.000"	"0.000212026145456323"	""	"0"	"5.428E-05"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFLDGDAWTNR"	"[K].eQFLDGDAWTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"3"	"3"	"0.5660"	"0.0000"	"1"	"1"	"1"	"560.94385"	"1680.81699"	"1680.81791"	"-0.55"	"-0.00031"	"13/126"	"13"	"126"	"1639813.76708984"	"HCD"	"MS2"	"3.048678"	"14.3"	"100.000"	"85.3502"	"29609"	"29609"	"29592"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.7"	""	"16.8"	""	"19.8"	""	"23.9"	""	"20.3"	"26.8"	""	"703"	"53"	"35.000"	"28.000"	"0.000160296975956881"	""	"0"	"1.495E-05"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFLDGDAWTNR"	"[K].eQFLDGDAWTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"840.91217"	"1680.81706"	"1680.81791"	"-0.51"	"-0.00043"	"7/126"	"7"	"126"	"173037.986450195"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"85.0513"	"29494"	"29494"	"29467"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.7"	""	"8.6"	""	"17.4"	""	"12.3"	""	"18.7"	"18.0"	""	"703"	"36"	"35.000"	"28.000"	"0.00988383141885228"	"22"	"0"	"0.002833"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFLDGDAWTNR"	"[K].eQFLDGDAWTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"840.91229"	"1680.81731"	"1680.81791"	"-0.36"	"-0.00030"	"6/126"	"6"	"126"	"176346.959289551"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"85.0121"	"29479"	"29479"	"29460"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.2"	""	"11.3"	""	"12.7"	""	"14.5"	""	"19.4"	"15.4"	""	"697"	"17"	"35.000"	"28.000"	"0.687389323536027"	"14"	"0.003449"	"0.03425"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFLDGDAWTNR"	"[K].eQFLDGDAWTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"840.91235"	"1680.81743"	"1680.81791"	"-0.29"	"-0.00024"	"7/126"	"7"	"126"	"95392.1869506836"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"85.6070"	"29707"	"29707"	"29692"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.8"	""	"3.2"	""	"7.6"	""	"10.8"	""	"10.9"	"10.4"	""	"697"	"12"	"35.000"	"28.000"	"2.08066797374467"	"18"	"0.008668"	"0.1117"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFLDGDAWTNR"	"[K].eQFLDGDAWTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.7067"	"0.0000"	"1"	"1"	"1"	"840.91241"	"1680.81755"	"1680.81791"	"-0.22"	"-0.00018"	"11/126"	"11"	"126"	"1066742.43261719"	"HCD"	"MS2"	"0"	"55.1"	"100.000"	"85.3295"	"29600"	"29600"	"29585"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"106.7"	""	"58.2"	""	"85.1"	""	"82.6"	""	"92.0"	"100.0"	""	"700"	"75"	"35.000"	"28.000"	"1.0643097589867E-06"	""	"0"	"2.135E-07"	"1.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFLDGDAWTNR"	"[K].eQFLDGDAWTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.7321"	"0.0000"	"1"	"1"	"1"	"840.91241"	"1680.81755"	"1680.81791"	"-0.22"	"-0.00018"	"9/126"	"9"	"126"	"1106021.89727783"	"HCD"	"MS2"	"0"	"54.9"	"100.000"	"85.3107"	"29593"	"29593"	"29580"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"108.8"	""	"64.7"	""	"77.1"	""	"82.7"	""	"95.5"	"93.2"	""	"700"	"56"	"35.000"	"28.000"	"8.12957878724987E-05"	""	"0"	"3.491E-06"	"1.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAADEGSGDMK"	"[K].lEAADEGSGDMk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"840.92804"	"1680.84880"	"1680.85147"	"-1.59"	"-0.00133"	"10/104"	"10"	"104"	"178634.304443359"	"HCD"	"MS2"	"0"	"17.8"	"100.000"	"54.7008"	"17253"	"17253"	"17224"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.7"	""	"20.7"	""	"26.6"	""	"16.3"	""	"41.4"	"39.5"	""	"888"	"23"	"36.000"	"29.000"	"0.209595990321034"	"14"	"0.0008629"	"0.009573"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAADEGSGDMK"	"[K].lEAADEGSGDMk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"840.92834"	"1680.84941"	"1680.85147"	"-1.23"	"-0.00103"	"13/104"	"13"	"104"	"225233.781433105"	"HCD"	"MS2"	"0"	"21.8"	"100.000"	"54.8998"	"17321"	"17321"	"17296"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.4"	""	"30.3"	""	"30.8"	""	"19.3"	""	"43.5"	"41.5"	""	"906"	"48"	"36.000"	"29.000"	"0.000708105882116352"	"20"	"0"	"0.0004428"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGTEAWEAAMK"	"[K].eGTEAWEAAMk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"840.93591"	"1680.86455"	"1680.86673"	"-1.30"	"-0.00109"	"6/92"	"6"	"92"	"121210.786437988"	"HCD"	"MS2"	"0"	"11.2"	"100.000"	"78.6073"	"26924"	"26924"	"26898"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.4"	""	"9.4"	""	"13.1"	""	"18.3"	""	"22.0"	"27.2"	""	"967"	"26"	"36.000"	"29.000"	"0.11950786241153"	"16"	"0.001886"	"0.02165"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGTEAWEAAMK"	"[K].eGTEAWEAAMk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"560.95996"	"1680.86533"	"1680.86673"	"-0.83"	"-0.00047"	"9/92"	"9"	"92"	"398109.578918457"	"HCD"	"MS2"	"13.62852"	"13.8"	"100.000"	"78.8748"	"27031"	"27031"	"27010"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.4"	""	"20.4"	""	"15.3"	""	"20.5"	"1.3"	"25.5"	"29.3"	""	"962"	"12"	"36.000"	"29.000"	"2.84541146038403"	"16"	"0.00379"	"0.03897"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQYDASELK"	"[K].tPAQYDASELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.7674"	"0.0000"	"1"	"1"	"1"	"560.97754"	"1680.91806"	"1680.92087"	"-1.67"	"-0.00094"	"15/110"	"15"	"110"	"2608471.5423584"	"HCD"	"MS2"	"13.19322"	"65.2"	"100.000"	"62.0654"	"20204"	"20204"	"20195"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"97.5"	""	"73.5"	""	"83.6"	""	"97.8"	""	"122.2"	"144.4"	""	"1049"	"43"	"37.000"	"30.000"	"0.00270237424083131"	"25"	"0"	"0.0001782"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQYDASELK"	"[K].tPAQYDASELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8525"	"0.0000"	"1"	"1"	"1"	"840.96271"	"1680.91814"	"1680.92087"	"-1.63"	"-0.00137"	"17/110"	"17"	"110"	"861394.485412598"	"HCD"	"MS2"	"0"	"68.9"	"100.000"	"62.0357"	"20193"	"20193"	"20173"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"94.1"	""	"76.6"	""	"93.4"	""	"107.4"	""	"137.5"	"145.7"	""	"1047"	"61"	"37.000"	"30.000"	"4.35428334172249E-05"	"25"	"0"	"2.071E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQYDASELK"	"[K].tPAQYDASELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"560.97778"	"1680.91880"	"1680.92087"	"-1.23"	"-0.00069"	"15/110"	"15"	"110"	"2979862.33978271"	"HCD"	"MS2"	"20.90059"	"71.2"	"100.000"	"61.9098"	"20157"	"20157"	"20146"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.2"	""	"84.1"	""	"92.8"	""	"119.2"	""	"131.7"	"145.3"	""	"1063"	"40"	"37.000"	"30.000"	"0.00547650223014719"	"24"	"0"	"5.289E-05"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQYDASELK"	"[K].tPAQYDASELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.7674"	"0.0000"	"1"	"1"	"1"	"560.97791"	"1680.91916"	"1680.92087"	"-1.02"	"-0.00057"	"7/110"	"7"	"110"	"1781028.1317749"	"HCD"	"MS2"	"29.82758"	"48.0"	"100.000"	"61.6141"	"20038"	"20038"	"20017"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.3"	""	"57.9"	""	"66.8"	""	"79.4"	""	"103.2"	"86.0"	""	"1057"	"43"	"37.000"	"30.000"	"0.00267328333868646"	"25"	"0"	"0.001223"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQYDASELK"	"[K].tPAQYDASELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"840.96326"	"1680.91924"	"1680.92087"	"-0.97"	"-0.00082"	"18/110"	"18"	"110"	"955607.474731445"	"HCD"	"MS2"	"0"	"78.3"	"100.000"	"61.8410"	"20130"	"20130"	"20112"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"114.8"	""	"94.0"	""	"98.0"	""	"129.8"	"3.1"	"142.0"	"160.2"	""	"1054"	"66"	"37.000"	"30.000"	"1.2996027307225E-05"	"26"	"0"	"4.1E-05"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQYDASELK"	"[K].tPAQYDASELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.6750"	"0.0000"	"1"	"1"	"1"	"560.97797"	"1680.91935"	"1680.92087"	"-0.91"	"-0.00051"	"7/110"	"7"	"110"	"2057824.05047607"	"HCD"	"MS2"	"23.58133"	"54.1"	"100.000"	"61.7722"	"20087"	"20087"	"20065"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"72.8"	""	"64.8"	""	"72.9"	""	"84.4"	"0.6"	"110.6"	"107.5"	""	"1053"	"40"	"37.000"	"30.000"	"0.00566758934976108"	"28"	"0"	"3.891E-05"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQYDASELK"	"[K].tPAQYDASELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"840.96356"	"1680.91985"	"1680.92087"	"-0.61"	"-0.00051"	"9/110"	"9"	"110"	"278630.205932617"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"61.5519"	"20013"	"20013"	"19985"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.2"	""	"36.8"	""	"32.2"	""	"50.4"	""	"48.9"	"57.7"	""	"1045"	"37"	"37.000"	"30.000"	"0.00950793698623717"	"20"	"0.0008629"	"0.01111"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQYDASELK"	"[K].tPAQYDASELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"840.96436"	"1680.92143"	"1680.92087"	"0.33"	"0.00028"	"9/110"	"9"	"110"	"413393.060302734"	"HCD"	"MS2"	"0"	"34.1"	"100.000"	"61.7401"	"20074"	"20074"	"20049"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.3"	""	"37.6"	""	"40.0"	""	"61.7"	""	"60.5"	"75.2"	""	"1035"	"54"	"37.000"	"30.000"	"0.00019629550472388"	"23"	"0"	"0.0009947"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIVDAAEDYAK"	"[R].eIVDAAEDYAk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"561.30554"	"1681.90207"	"1681.90489"	"-1.67"	"-0.00094"	"12/94"	"12"	"94"	"637751.336669922"	"HCD"	"MS2"	"0"	"18.3"	"100.000"	"81.0722"	"27914"	"27914"	"27899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.3"	"1.9"	"22.1"	""	"18.5"	""	"27.3"	""	"43.5"	"34.3"	""	"1043"	"32"	"37.000"	"30.000"	"0.0295293789233449"	"15"	"0.0002479"	"0.005574"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIVDAAEDYAK"	"[R].eIVDAAEDYAk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"561.30566"	"1681.90244"	"1681.90489"	"-1.46"	"-0.00082"	"8/94"	"8"	"94"	"416218.637084961"	"HCD"	"MS2"	"3.958087"	"13.6"	"100.000"	"81.2598"	"27991"	"27991"	"27974"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.8"	""	"14.0"	""	"18.9"	""	"21.5"	""	"29.1"	"27.1"	""	"1039"	"51"	"37.000"	"30.000"	"0.00042226545314725"	"18"	"0"	"0.0003358"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIVDAAEDYAK"	"[R].eIVDAAEDYAk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"841.45587"	"1681.90447"	"1681.90489"	"-0.25"	"-0.00021"	"10/94"	"10"	"94"	"178729.342956543"	"HCD"	"MS2"	"0"	"16.9"	"100.000"	"81.1114"	"27930"	"27930"	"27912"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.4"	""	"18.6"	""	"23.4"	""	"19.4"	""	"40.8"	"31.5"	""	"1043"	"30"	"37.000"	"30.000"	"0.0553674233079135"	"19"	"0"	"0.002212"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIVDAAEDYAK"	"[R].eIVDAAEDYAk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"561.31274"	"1681.92368"	"1681.90489"	"11.17"	"0.00626"	"11/94"	"11"	"94"	"499331.927490234"	"HCD"	"MS2"	"0"	"13.4"	"100.000"	"81.0014"	"27887"	"27887"	"27867"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.1"	""	"17.6"	""	"11.7"	""	"17.7"	""	"37.4"	"23.5"	""	"983"	"20"	"36.000"	"29.000"	"0.504107921752567"	"16"	"0.004022"	"0.04262"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSSDLTTASK"	"[R].dLSSSDLTTASk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"841.96295"	"1682.91863"	"1682.92127"	"-1.57"	"-0.00132"	"9/108"	"9"	"108"	"399390.575317383"	"HCD"	"MS2"	"100"	"35.5"	"100.000"	"62.4091"	"20341"	"20341"	"20315"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.5"	""	"56.6"	""	"52.9"	""	"54.0"	"1.7"	"57.5"	"51.1"	""	"941"	"19"	"36.000"	"29.000"	"0.55024946347485"	"21"	"0.0006732"	"0.008949"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSSDLTTASK"	"[R].dLSSSDLTTASk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"841.96497"	"1682.92266"	"1682.92127"	"0.83"	"0.00069"	"12/108"	"12"	"108"	"369931.695922852"	"HCD"	"MS2"	"100"	"31.3"	"100.000"	"62.2534"	"20294"	"20294"	"20269"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.6"	""	"51.6"	""	"41.9"	""	"51.1"	""	"54.1"	"43.4"	""	"949"	"30"	"36.000"	"29.000"	"0.0502615892596624"	"22"	"0"	"0.002336"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSSDLTTASK"	"[R].dLSSSDLTTASk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"561.64575"	"1682.92270"	"1682.92127"	"0.85"	"0.00048"	"11/108"	"11"	"108"	"1038208.22827148"	"HCD"	"MS2"	"12.81929"	"33.9"	"100.000"	"62.3083"	"20300"	"20300"	"20284"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.4"	""	"56.6"	""	"47.1"	""	"46.6"	""	"57.4"	"57.2"	""	"949"	"35"	"36.000"	"29.000"	"0.0143296709133076"	"18"	"0"	"0.001402"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSSDLTTASK"	"[R].dLSSSDLTTASk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"561.64581"	"1682.92289"	"1682.92127"	"0.96"	"0.00054"	"13/108"	"13"	"108"	"1311511.21435547"	"HCD"	"MS2"	"18.38082"	"36.8"	"100.000"	"62.2396"	"20288"	"20288"	"20269"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"64.9"	""	"65.3"	""	"41.7"	""	"63.6"	"0.7"	"59.1"	"52.0"	""	"951"	"42"	"36.000"	"29.000"	"0.00323705830058874"	"15"	"0"	"0.000325"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MHPELGSFYDSR"	"[R].mHPELGSFYDSR.[F]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"561.93768"	"1683.79850"	"1683.79982"	"-0.79"	"-0.00044"	"7/102"	"7"	"102"	"3509071.7980957"	"HCD"	"MS2"	"37.01892"	"56.4"	"100.000"	"51.2984"	"15866"	"15866"	"15847"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.6"	""	"66.2"	""	"68.2"	""	"110.9"	""	"112.9"	"111.6"	""	"480"	"50"	"33.000"	"26.000"	"0.000223981032191278"	"16"	"0"	"0.000107"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MHPELGSFYDSR"	"[R].mHPELGSFYDSR.[F]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"561.93768"	"1683.79850"	"1683.79982"	"-0.79"	"-0.00044"	"9/102"	"9"	"102"	"3878284.75561523"	"HCD"	"MS2"	"26.15934"	"61.4"	"100.000"	"51.4560"	"15919"	"15919"	"15899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.3"	""	"73.7"	""	"71.2"	""	"115.5"	""	"128.7"	"118.9"	""	"480"	"43"	"33.000"	"26.000"	"0.00130380079558184"	"15"	"0"	"0.00033"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MHPELGSFYDSR"	"[R].mHPELGSFYDSR.[F]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"561.93805"	"1683.79959"	"1683.79982"	"-0.14"	"-0.00008"	"7/102"	"7"	"102"	"2165118.9954834"	"HCD"	"MS2"	"80.25887"	"41.9"	"100.000"	"51.0036"	"15746"	"15746"	"15726"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.6"	""	"51.7"	""	"47.1"	""	"81.6"	""	"87.6"	"74.6"	""	"489"	"18"	"33.000"	"26.000"	"0.372630898303437"	"22"	"0"	"0.002315"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVETMNYADIER"	"[R].nVETMNYADIER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"842.41223"	"1683.81719"	"1683.82095"	"-2.24"	"-0.00188"	"9/126"	"9"	"126"	"581826.523681641"	"HCD"	"MS2"	"0"	"36.9"	"100.000"	"67.7601"	"22515"	"22515"	"22494"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.5"	""	"37.6"	""	"43.3"	""	"44.5"	""	"78.0"	"86.8"	""	"618"	"33"	"34.000"	"27.000"	"0.0153800759258491"	"15"	"0"	"0.0005476"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVETMNYADIER"	"[R].nVETMNYADIER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"842.41302"	"1683.81877"	"1683.82095"	"-1.29"	"-0.00109"	"7/126"	"7"	"126"	"184682.310302734"	"HCD"	"MS2"	"5.573222"	"13.4"	"100.000"	"68.0575"	"22636"	"22636"	"22615"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.8"	""	"15.1"	""	"18.7"	""	"15.2"	"1.8"	"22.8"	"29.4"	""	"626"	"32"	"34.000"	"27.000"	"0.0207751581035797"	"14"	"0"	"0.0005108"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVETMNYADIER"	"[R].nVETMNYADIER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"842.41382"	"1683.82036"	"1683.82095"	"-0.35"	"-0.00030"	"8/126"	"8"	"126"	"589313.315551758"	"HCD"	"MS2"	"0"	"38.9"	"100.000"	"67.6316"	"22478"	"22478"	"22456"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.5"	""	"39.7"	""	"52.3"	""	"43.7"	""	"94.6"	"94.2"	""	"639"	"30"	"35.000"	"28.000"	"0.0296122128569702"	"19"	"0"	"0.0009441"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVETMNYADIER"	"[R].nVETMNYADIER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"842.42218"	"1683.83708"	"1683.82095"	"9.58"	"0.00807"	"9/126"	"9"	"126"	"610201.850708008"	"HCD"	"MS2"	"6.863986"	"37.4"	"100.000"	"67.5881"	"22460"	"22460"	"22440"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.5"	""	"36.5"	""	"39.7"	""	"51.4"	""	"86.3"	"92.0"	""	"751"	"58"	"35.000"	"28.000"	"5.69652412980981E-05"	"18"	"0"	"1.352E-05"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNQIDHIDEK"	"[R].nNQIDHIDEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"0"	"3"	"3"	"0.6957"	"0.0000"	"1"	"1"	"1"	"561.97302"	"1683.90451"	"1683.90662"	"-1.25"	"-0.00070"	"13/98"	"13"	"98"	"3501085.93432617"	"HCD"	"MS2"	"22.04348"	"132.7"	"100.000"	"38.8110"	"10785"	"10785"	"10764"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"144.9"	""	"118.1"	""	"134.1"	""	"226.1"	"1.5"	"315.1"	"324.1"	""	"955"	"23"	"36.000"	"29.000"	"0.216757121950472"	"21"	"0"	"0.002812"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFEEVAFDEK"	"[K].nFEEVAFDEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.7442"	"0.0000"	"1"	"1"	"1"	"562.63049"	"1685.87693"	"1685.87867"	"-1.04"	"-0.00058"	"7/102"	"7"	"102"	"1489552.246521"	"HCD"	"MS2"	"9.622821"	"42.7"	"100.000"	"87.5767"	"30486"	"30486"	"30476"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.4"	""	"48.3"	""	"52.9"	""	"86.8"	""	"81.9"	"90.3"	""	"884"	"43"	"36.000"	"29.000"	"0.00234650924350097"	"26"	"0"	"0.0009779"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFEEVAFDEK"	"[K].nFEEVAFDEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"562.63062"	"1685.87729"	"1685.87867"	"-0.82"	"-0.00046"	"10/102"	"10"	"102"	"909633.348937988"	"HCD"	"MS2"	"41.3167"	"30.3"	"100.000"	"87.2939"	"30374"	"30374"	"30360"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.8"	""	"39.3"	""	"40.1"	""	"45.9"	"0.0"	"67.2"	"59.3"	""	"897"	"39"	"36.000"	"29.000"	"0.00540458619256751"	"27"	"0"	"0.002275"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFEEVAFDEK"	"[K].nFEEVAFDEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"562.63068"	"1685.87748"	"1685.87867"	"-0.71"	"-0.00040"	"10/102"	"10"	"102"	"898694.738708496"	"HCD"	"MS2"	"26.63197"	"31.4"	"100.000"	"87.2827"	"30363"	"30363"	"30350"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.5"	""	"37.6"	""	"43.2"	""	"49.6"	""	"58.9"	"69.5"	""	"898"	"34"	"36.000"	"29.000"	"0.0160046558908384"	"25"	"0"	"0.002048"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFEEVAFDEK"	"[K].nFEEVAFDEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"562.63092"	"1685.87821"	"1685.87867"	"-0.28"	"-0.00015"	"12/102"	"12"	"102"	"1545698.9430542"	"HCD"	"MS2"	"10.83221"	"44.3"	"100.000"	"87.5584"	"30473"	"30473"	"30461"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.1"	""	"55.2"	""	"55.2"	""	"75.2"	""	"89.3"	"92.0"	""	"904"	"48"	"36.000"	"29.000"	"0.000755332957668439"	"27"	"0"	"0.001037"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFEEVAFDEK"	"[K].nFEEVAFDEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"843.44281"	"1685.87834"	"1685.87867"	"-0.20"	"-0.00016"	"8/102"	"8"	"102"	"143559.69909668"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"87.2455"	"30349"	"30349"	"30329"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.0"	""	"13.6"	""	"17.3"	""	"27.5"	""	"24.9"	"25.5"	""	"906"	"18"	"36.000"	"29.000"	"0.798175149024469"	"14"	"0.002973"	"0.03005"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFEEVAFDEK"	"[K].nFEEVAFDEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"843.44312"	"1685.87895"	"1685.87867"	"0.17"	"0.00014"	"8/102"	"8"	"102"	"637584.425598145"	"HCD"	"MS2"	"0"	"60.8"	"100.000"	"87.5535"	"30477"	"30477"	"30463"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"80.2"	""	"67.3"	""	"90.4"	""	"104.4"	""	"116.5"	"118.5"	""	"905"	"56"	"36.000"	"29.000"	"0.000106320885143386"	""	"0"	"5.743E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFEEVAFDEK"	"[K].nFEEVAFDEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"843.44324"	"1685.87920"	"1685.87867"	"0.31"	"0.00026"	"7/102"	"7"	"102"	"162729.190551758"	"HCD"	"MS2"	"0"	"15.3"	"100.000"	"87.2730"	"30366"	"30366"	"30351"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.0"	""	"16.6"	""	"20.8"	""	"30.8"	""	"27.8"	"26.8"	""	"902"	"34"	"36.000"	"29.000"	"0.0188441495357626"	"21"	"0.0002479"	"0.005277"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFEEVAFDEK"	"[K].nFEEVAFDEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"843.44336"	"1685.87944"	"1685.87867"	"0.46"	"0.00038"	"9/102"	"9"	"102"	"517570.238647461"	"HCD"	"MS2"	"0"	"52.0"	"100.000"	"87.5350"	"30463"	"30463"	"30445"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.3"	""	"56.9"	""	"67.1"	""	"88.4"	"0.1"	"110.2"	"104.0"	""	"898"	"48"	"36.000"	"29.000"	"0.000685877160148895"	"25"	"0"	"0.000129"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEDTNLASSTLLR"	"[K].hEDTNLASSTLLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P29066"	"Beta-arrestin-1 OS=Rattus norvegicus OX=10116 GN=Arrb1 PE=1 SV=1"	"P29066"	"Beta-arrestin-1 OS=Rattus norvegicus OX=10116 GN=Arrb1 PE=1 SV=1"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"562.63879"	"1685.90183"	"1685.90198"	"-0.09"	"-0.00005"	"12/128"	"12"	"128"	"2109224.69696045"	"HCD"	"MS2"	"45.52689"	"43.5"	"100.000"	"50.9691"	"15732"	"15732"	"15712"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.3"	""	"52.4"	""	"60.0"	""	"77.9"	""	"88.1"	"81.2"	""	"920"	"22"	"36.000"	"29.000"	"0.301132640070946"	"21"	"0"	"5.546E-05"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDRPVALVTGANK"	"[M].sSDRPVALVTGANk.[G]"	"N-Term(Prot)(Acetyl); K14(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"562.65051"	"1685.93698"	"1685.93836"	"-0.82"	"-0.00046"	"13/142"	"13"	"142"	"2257923.72558594"	"HCD"	"MS2"	"26.8546"	"67.8"	"100.000"	"59.4628"	"19180"	"19180"	"19158"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.2"	""	"80.1"	""	"85.5"	""	"114.8"	"0.7"	"131.4"	"126.9"	""	"882"	"52"	"36.000"	"29.000"	"0.000293385461884968"	"19"	"0"	"0.0001856"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDRPVALVTGANK"	"[M].sSDRPVALVTGANk.[G]"	"N-Term(Prot)(Acetyl); K14(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"843.47241"	"1685.93755"	"1685.93836"	"-0.48"	"-0.00041"	"9/142"	"9"	"142"	"362432.426208496"	"HCD"	"MS2"	"0"	"24.6"	"100.000"	"59.2122"	"19093"	"19093"	"19069"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.4"	""	"26.2"	""	"31.6"	""	"41.4"	"0.4"	"44.1"	"44.8"	""	"887"	"42"	"36.000"	"29.000"	"0.0025170603249869"	"17"	"0.0008629"	"0.009941"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDRPVALVTGANK"	"[M].sSDRPVALVTGANk.[G]"	"N-Term(Prot)(Acetyl); K14(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"562.65070"	"1685.93753"	"1685.93836"	"-0.49"	"-0.00028"	"12/142"	"12"	"142"	"2227215.59051514"	"HCD"	"MS2"	"15.10542"	"63.7"	"100.000"	"59.2330"	"19101"	"19101"	"19085"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.0"	""	"75.2"	""	"87.8"	""	"100.1"	""	"135.1"	"130.2"	""	"887"	"27"	"36.000"	"29.000"	"0.0797799250859617"	"17"	"0"	"0.0009004"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDRPVALVTGANK"	"[M].sSDRPVALVTGANk.[G]"	"N-Term(Prot)(Acetyl); K14(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"843.47272"	"1685.93816"	"1685.93836"	"-0.12"	"-0.00010"	"7/142"	"7"	"142"	"357934.545166016"	"HCD"	"MS2"	"0"	"28.1"	"100.000"	"59.4720"	"19184"	"19184"	"19158"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.5"	""	"38.4"	""	"37.0"	""	"47.1"	""	"59.1"	"42.8"	""	"884"	"27"	"36.000"	"29.000"	"0.091079842166534"	"14"	"0.00263"	"0.02559"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPPENSDIGTGK"	"[K].nPPENSDIGTGk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"2"	"2"	"0.9107"	"0.0000"	"1"	"1"	"1"	"843.95740"	"1686.90752"	"1686.90628"	"0.73"	"0.00062"	"7/122"	"7"	"122"	"132070.231506348"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"41.8174"	"11999"	"11999"	"11970"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.2"	""	"9.7"	""	"15.3"	""	"18.4"	""	"17.7"	"17.6"	""	"994"	"56"	"36.000"	"29.000"	"0.000114645335279388"	"21"	"0"	"0.002003"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEQPQVELFVK"	"[M].aEEQPQVELFVk.[A]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"844.45789"	"1687.90849"	"1687.91042"	"-1.14"	"-0.00096"	"4/116"	"4"	"116"	"58835.0161132813"	"HCD"	"MS2"	"0"	"2.1"	"100.000"	"108.1643"	"37641"	"37641"	"37628"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.2"	""	"3.6"	""	"1.9"	""	"3.4"	""	"4.8"	"2.5"	""	"966"	"10"	"36.000"	"29.000"	"5.02281440095435"	"13"	"0.008777"	"0.1139"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEQPQVELFVK"	"[M].aEEQPQVELFVk.[A]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"844.45795"	"1687.90862"	"1687.91042"	"-1.07"	"-0.00090"	"6/116"	"6"	"116"	"171816.694030762"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"107.8252"	"37594"	"37594"	"37583"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.7"	""	"9.2"	""	"11.8"	""	"10.5"	""	"14.0"	"11.4"	""	"959"	"36"	"36.000"	"29.000"	"0.0118519172753523"	"28"	"0"	"0.00192"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEQPQVELFVK"	"[M].aEEQPQVELFVk.[A]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"3"	"3"	"0.6061"	"0.0000"	"1"	"1"	"1"	"563.30774"	"1687.90866"	"1687.91042"	"-1.04"	"-0.00058"	"6/116"	"6"	"116"	"507317.309997559"	"HCD"	"MS2"	"10.30437"	"14.8"	"100.000"	"107.8531"	"37605"	"37605"	"37591"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.6"	""	"16.6"	""	"23.4"	""	"25.7"	""	"29.4"	"25.7"	""	"959"	"33"	"36.000"	"29.000"	"0.0249338080337821"	"27"	"0.0008629"	"0.01069"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEQPQVELFVK"	"[M].aEEQPQVELFVk.[A]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"844.45850"	"1687.90972"	"1687.91042"	"-0.42"	"-0.00035"	"7/116"	"7"	"116"	"257937.471313477"	"HCD"	"MS2"	"14.33646"	"9.8"	"100.000"	"107.8773"	"37533"	"37533"	"37521"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.1"	""	"11.6"	""	"15.9"	""	"13.7"	""	"18.6"	"22.9"	""	"992"	"48"	"36.000"	"29.000"	"0.000786107023460713"	"28"	"0"	"0.0007749"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEQPQVELFVK"	"[M].aEEQPQVELFVk.[A]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"563.30823"	"1687.91013"	"1687.91042"	"-0.17"	"-0.00010"	"6/116"	"6"	"116"	"457502.308898926"	"HCD"	"MS2"	"10.55941"	"11.6"	"100.000"	"107.8937"	"37539"	"37539"	"37528"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.4"	""	"10.1"	""	"17.3"	""	"23.3"	""	"19.6"	"22.5"	""	"989"	"35"	"36.000"	"29.000"	"0.0144599335084353"	"29"	"0.0001301"	"0.004023"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYGENIGYSEK"	"[K].aYGENIGYSEk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07340"	"Sodium/potassium-transporting ATPase subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Atp1b1 PE=1 SV=1"	"P07340"	"Sodium/potassium-transporting ATPase subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Atp1b1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"844.94965"	"1688.89202"	"1688.88957"	"1.45"	"0.00122"	"12/104"	"12"	"104"	"204871.181335449"	"HCD"	"MS2"	"0"	"19.4"	"100.000"	"58.0886"	"18634"	"18634"	"18607"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.3"	""	"24.2"	""	"31.0"	""	"25.1"	""	"41.1"	"38.9"	""	"1040"	"46"	"37.000"	"30.000"	"0.0013708923206292"	"16"	"0"	"0.0002042"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYGENIGYSEK"	"[K].aYGENIGYSEk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07340"	"Sodium/potassium-transporting ATPase subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Atp1b1 PE=1 SV=1"	"P07340"	"Sodium/potassium-transporting ATPase subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Atp1b1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"844.94983"	"1688.89238"	"1688.88957"	"1.66"	"0.00140"	"9/104"	"9"	"104"	"181635.685852051"	"HCD"	"MS2"	"0"	"20.7"	"100.000"	"58.2080"	"18668"	"18668"	"18639"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.5"	""	"26.5"	""	"27.6"	""	"34.8"	""	"41.4"	"41.8"	""	"1047"	"27"	"37.000"	"30.000"	"0.115323200340848"	"14"	"0.001036"	"0.01356"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYTSIGEDYDER"	"[R].iYTSIGEDYDER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"845.40979"	"1689.81230"	"1689.81691"	"-2.73"	"-0.00230"	"8/104"	"8"	"104"	"155310.254211426"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"73.5468"	"24886"	"24886"	"24866"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.6"	""	"11.8"	""	"14.7"	""	"13.5"	""	"13.3"	"19.9"	""	"554"	"19"	"34.000"	"27.000"	"0.343146654468912"	"14"	"0.000936"	"0.01183"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYTSIGEDYDER"	"[R].iYTSIGEDYDER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"845.41193"	"1689.81658"	"1689.81691"	"-0.20"	"-0.00017"	"9/104"	"9"	"104"	"207944.020812988"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"73.2213"	"24754"	"24754"	"24727"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.5"	""	"17.0"	""	"19.3"	""	"22.3"	""	"17.5"	"24.4"	""	"601"	"52"	"34.000"	"27.000"	"0.000198996059362379"	"16"	"0"	"8.161E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYTSIGEDYDER"	"[R].iYTSIGEDYDER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"845.41193"	"1689.81658"	"1689.81691"	"-0.20"	"-0.00017"	"8/104"	"8"	"104"	"143285.354553223"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"73.6771"	"24926"	"24926"	"24905"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.3"	""	"9.8"	""	"11.9"	""	"11.3"	""	"18.1"	"13.8"	""	"601"	"13"	"34.000"	"27.000"	"1.44492224209143"	"13"	"0.004022"	"0.04319"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYTSIGEDYDER"	"[R].iYTSIGEDYDER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"845.41223"	"1689.81719"	"1689.81691"	"0.16"	"0.00014"	"8/104"	"8"	"104"	"194287.608581543"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"73.3519"	"24794"	"24794"	"24768"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.7"	""	"18.9"	""	"16.0"	""	"11.0"	""	"26.1"	"21.5"	""	"608"	"19"	"34.000"	"27.000"	"0.386254527983397"	"14"	"0.0002479"	"0.005762"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDIDEIVLVGGSTR"	"[K].sDIDEIVLVGGSTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.8974"	"0.0000"	"1"	"1"	"1"	"563.97797"	"1689.91935"	"1689.92205"	"-1.60"	"-0.00090"	"8/128"	"8"	"128"	"361181.656188965"	"HCD"	"MS2"	"25.04807"	"5.2"	"100.000"	"93.2720"	"32670"	"32670"	"32658"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.0"	""	"8.9"	""	"5.5"	""	"8.3"	""	"8.5"	"10.6"	""	"1086"	"39"	"37.000"	"30.000"	"0.00666499502519016"	"19"	"0"	"0.001372"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDIDEIVLVGGSTR"	"[K].sDIDEIVLVGGSTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.7761"	"0.0000"	"1"	"1"	"1"	"845.46399"	"1689.92070"	"1689.92205"	"-0.79"	"-0.00067"	"9/128"	"9"	"128"	"276862.17376709"	"HCD"	"MS2"	"0"	"13.4"	"100.000"	"93.5520"	"32773"	"32773"	"32766"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.6"	""	"15.3"	""	"16.3"	""	"32.5"	""	"17.2"	"27.9"	""	"1072"	"67"	"37.000"	"30.000"	"9.55355019352177E-06"	""	"0"	"2.148E-07"	"1.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDIDEIVLVGGSTR"	"[K].sDIDEIVLVGGSTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"563.97852"	"1689.92099"	"1689.92205"	"-0.62"	"-0.00035"	"11/128"	"11"	"128"	"908885.58605957"	"HCD"	"MS2"	"4.252854"	"5.0"	"100.000"	"93.5401"	"32768"	"32768"	"32763"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.0"	""	"4.1"	""	"5.0"	""	"10.5"	""	"9.3"	"11.4"	""	"1063"	"20"	"37.000"	"30.000"	"0.589526414311966"	"16"	"0"	"0.001634"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDIDEIVLVGGSTR"	"[K].sDIDEIVLVGGSTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"845.46436"	"1689.92143"	"1689.92205"	"-0.36"	"-0.00031"	"16/128"	"16"	"128"	"283726.985839844"	"HCD"	"MS2"	"2.579733"	"15.1"	"100.000"	"93.5674"	"32795"	"32795"	"32787"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.7"	""	"13.8"	""	"13.5"	""	"35.1"	""	"29.0"	"29.0"	""	"1066"	"60"	"37.000"	"30.000"	"5.06672355018798E-05"	"26"	"0"	"3.031E-06"	"1.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDIDEIVLVGGSTR"	"[K].sDIDEIVLVGGSTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"563.97876"	"1689.92173"	"1689.92205"	"-0.19"	"-0.00011"	"11/128"	"11"	"128"	"282570.506713867"	"HCD"	"MS2"	"5.808217"	"4.3"	"100.000"	"93.2777"	"32687"	"32687"	"32678"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.0"	""	"3.4"	""	"10.5"	""	"6.9"	""	"7.7"	"6.1"	""	"1063"	"29"	"37.000"	"30.000"	"0.0615890164796449"	"17"	"0"	"0.002174"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDIDEIVLVGGSTR"	"[K].sDIDEIVLVGGSTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"845.46454"	"1689.92180"	"1689.92205"	"-0.14"	"-0.00012"	"6/128"	"6"	"128"	"189652.427307129"	"HCD"	"MS2"	"100"	"8.5"	"100.000"	"93.2857"	"32675"	"32675"	"32666"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.7"	""	"10.7"	""	"11.7"	""	"15.7"	""	"17.4"	"16.4"	""	"1058"	"21"	"37.000"	"30.000"	"0.392153117648185"	"24"	"0"	"0.0009129"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDIDEIVLVGGSTR"	"[K].sDIDEIVLVGGSTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"845.46466"	"1689.92204"	"1689.92205"	"0.00"	"0.00000"	"13/128"	"13"	"128"	"190215.233337402"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"93.3033"	"32697"	"32697"	"32681"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.4"	""	"13.9"	""	"13.1"	""	"17.2"	""	"18.0"	"20.2"	""	"1052"	"40"	"37.000"	"30.000"	"0.00537014168430241"	"23"	"0"	"0.0002957"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDETMYVESK"	"[R].dDETmYVESk.[K]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"845.91461"	"1690.82195"	"1690.82459"	"-1.56"	"-0.00132"	"8/88"	"8"	"88"	"207113.038818359"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"50.8202"	"15661"	"15661"	"15636"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.2"	""	"5.9"	""	"16.7"	""	"33.2"	""	"30.6"	"29.9"	""	"633"	"32"	"35.000"	"28.000"	"0.0215960196695838"	"14"	"0.0003538"	"0.006536"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDETMYVESK"	"[R].dDETmYVESk.[K]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"845.91754"	"1690.82781"	"1690.82459"	"1.90"	"0.00161"	"11/88"	"11"	"88"	"184346.543579102"	"HCD"	"MS2"	"0"	"13.4"	"100.000"	"50.3937"	"15498"	"15498"	"15474"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.5"	""	"7.0"	""	"12.7"	""	"38.3"	""	"25.3"	"29.4"	""	"673"	"29"	"35.000"	"28.000"	"0.0457072474776577"	"14"	"0.003111"	"0.03107"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADDPTMGEGPDK"	"[K].aDDPTMGEGPDk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P61765"	"Syntaxin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Stxbp1 PE=1 SV=1"	"P61765"	"Syntaxin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Stxbp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"845.92120"	"1690.83513"	"1690.83582"	"-0.41"	"-0.00035"	"5/106"	"5"	"106"	"148827.042419434"	"HCD"	"MS2"	"100"	"12.0"	"100.000"	"47.2179"	"14204"	"14204"	"14174"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.1"	""	"19.7"	""	"11.1"	""	"12.9"	""	"30.0"	"23.5"	""	"754"	"5"	"35.000"	"28.000"	"11.1260587845323"	"13"	"0.00736"	"0.08569"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSHYDELLAAEAR"	"[R].sSHYDELLAAEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"3"	"3"	"0.6383"	"0.0000"	"1"	"1"	"1"	"564.29114"	"1690.85886"	"1690.85978"	"-0.54"	"-0.00031"	"8/116"	"8"	"116"	"2681042.15814209"	"HCD"	"MS2"	"13.62052"	"27.0"	"100.000"	"55.0740"	"17404"	"17404"	"17384"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.1"	""	"27.1"	""	"34.5"	""	"48.8"	""	"65.9"	"51.5"	""	"939"	"47"	"36.000"	"29.000"	"0.00103665822215237"	""	"0"	"1.418E-05"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSHYDELLAAEAR"	"[R].sSHYDELLAAEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"3"	"3"	"0.7708"	"0.0000"	"1"	"1"	"1"	"564.29181"	"1690.86087"	"1690.85978"	"0.65"	"0.00036"	"15/116"	"15"	"116"	"2080861.73718262"	"HCD"	"MS2"	"2.949764"	"22.8"	"100.000"	"55.2760"	"17473"	"17473"	"17447"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.1"	""	"21.0"	""	"28.8"	""	"40.9"	""	"57.6"	"45.4"	""	"929"	"48"	"36.000"	"29.000"	"0.000744707483975524"	"27"	"0"	"4.277E-06"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAALPGMESTQDR"	"[R].vAAALPGmESTQDR.[S]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"1"	"845.93506"	"1690.86284"	"1690.86315"	"-0.18"	"-0.00015"	"5/116"	"5"	"116"	"110478.967956543"	"HCD"	"MS2"	"100"	"6.7"	"100.000"	"51.6722"	"16008"	"16008"	"15979"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.4"	""	"6.3"	""	"7.8"	""	"15.2"	""	"14.1"	"14.6"	""	"931"	"17"	"36.000"	"29.000"	"0.891086133097316"	"24"	"0"	"0.0008047"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELVDDSITNVK"	"[K].eLVDDSITNVk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P22062"	"Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Pcmt1 PE=1 SV=2"	"P22062"	"Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Pcmt1 PE=1 SV=2"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"845.98456"	"1690.96184"	"1690.96274"	"-0.53"	"-0.00045"	"5/98"	"5"	"98"	"88758.2892456055"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"80.3885"	"27640"	"27640"	"27619"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.9"	""	"7.8"	""	"8.8"	""	"11.0"	"2.0"	"15.2"	"12.3"	""	"1053"	"23"	"37.000"	"30.000"	"0.256093393796555"	"17"	"0.006958"	"0.08115"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMNDAAMFYTNR"	"[K].eMNDAAMFYTNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"846.39014"	"1691.77300"	"1691.77189"	"0.65"	"0.00055"	"4/124"	"4"	"124"	"94299.1713256836"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"74.9059"	"25420"	"25420"	"25397"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.9"	""	"9.7"	""	"6.7"	""	"13.5"	""	"12.4"	"15.9"	""	"318"	"8"	"32.000"	"25.000"	"2.58462252164327"	"13"	"0.004942"	"0.053"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMNDAAMFYTNR"	"[K].eMNDAAMFYTNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"846.39020"	"1691.77312"	"1691.77189"	"0.72"	"0.00061"	"4/124"	"4"	"124"	"92853.0393676758"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"74.7413"	"25371"	"25371"	"25344"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.7"	""	"8.5"	""	"11.0"	""	"9.1"	""	"17.0"	"15.0"	""	"318"	"12"	"32.000"	"25.000"	"0.982646076220082"	"14"	"0.006769"	"0.07762"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGTSDVEVNEK"	"[K].vGGTSDVEVNEk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8590"	"0.0000"	"1"	"1"	"1"	"846.46368"	"1691.92009"	"1691.92160"	"-0.89"	"-0.00075"	"10/106"	"10"	"106"	"295289.103149414"	"HCD"	"MS2"	"0"	"28.0"	"100.000"	"49.3943"	"15091"	"15091"	"15063"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"58.4"	""	"37.3"	""	"41.8"	""	"43.9"	""	"43.1"	"41.4"	""	"1117"	"78"	"37.000"	"30.000"	"8.01720848528016E-07"	"28"	"0"	"1.116E-06"	"1.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGTSDVEVNEK"	"[K].vGGTSDVEVNEk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"846.46393"	"1691.92058"	"1691.92160"	"-0.60"	"-0.00051"	"8/106"	"8"	"106"	"210455.949157715"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"49.6940"	"15213"	"15213"	"15190"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.1"	""	"24.3"	""	"26.8"	""	"28.4"	""	"27.5"	"27.0"	""	"1113"	"47"	"37.000"	"30.000"	"0.00124012416056892"	"22"	"0"	"0.003257"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGTSDVEVNEK"	"[K].vGGTSDVEVNEk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"846.46423"	"1691.92119"	"1691.92160"	"-0.24"	"-0.00021"	"8/106"	"8"	"106"	"147829.95703125"	"HCD"	"MS2"	"0"	"13.8"	"100.000"	"50.1347"	"15381"	"15381"	"15358"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.1"	""	"15.9"	""	"18.0"	""	"22.3"	""	"22.7"	"27.1"	""	"1105"	"15"	"37.000"	"30.000"	"1.70346134251277"	"13"	"0.006574"	"0.07398"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGTSDVEVNEK"	"[K].vGGTSDVEVNEk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"564.64526"	"1691.92124"	"1691.92160"	"-0.21"	"-0.00012"	"15/106"	"15"	"106"	"2841305.1685791"	"HCD"	"MS2"	"15.22183"	"79.3"	"100.000"	"49.5671"	"15161"	"15161"	"15142"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"141.9"	""	"95.1"	""	"117.3"	""	"137.1"	"0.1"	"136.6"	"122.0"	""	"1104"	"54"	"37.000"	"30.000"	"0.000225392301255646"	"26"	"0"	"5.429E-05"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGTSDVEVNEK"	"[K].vGGTSDVEVNEk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"564.64545"	"1691.92179"	"1691.92160"	"0.11"	"0.00006"	"14/106"	"14"	"106"	"3110832.13928223"	"HCD"	"MS2"	"17.02092"	"86.8"	"100.000"	"49.9713"	"15314"	"15314"	"15294"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"147.5"	""	"119.8"	""	"127.1"	""	"138.8"	""	"149.2"	"138.3"	""	"1112"	"42"	"37.000"	"30.000"	"0.00322162355213346"	"21"	"0"	"2.101E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGTSDVEVNEK"	"[K].vGGTSDVEVNEk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.9194"	"0.0000"	"1"	"1"	"1"	"846.46484"	"1691.92241"	"1691.92160"	"0.48"	"0.00041"	"16/106"	"16"	"106"	"439635.514953613"	"HCD"	"MS2"	"0"	"38.9"	"100.000"	"49.8280"	"15256"	"15256"	"15232"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"82.8"	""	"47.3"	""	"63.7"	""	"62.3"	""	"62.0"	"50.8"	""	"1109"	"62"	"37.000"	"30.000"	"3.88956962973874E-05"	"21"	"0"	"2.662E-06"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAGMDVELTVEER"	"[K].vAGmDVELTVEER.[N]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"846.93707"	"1692.86687"	"1692.86757"	"-0.41"	"-0.00035"	"13/110"	"13"	"110"	"230367.264343262"	"HCD"	"MS2"	"8.078838"	"11.6"	"100.000"	"68.4457"	"22809"	"22809"	"22783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.5"	""	"9.7"	""	"7.1"	""	"39.8"	""	"19.1"	"24.6"	""	"979"	"26"	"36.000"	"29.000"	"0.124094546462872"	"22"	"0.0008629"	"0.01059"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAGMDVELTVEER"	"[K].vAGmDVELTVEER.[N]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"846.93762"	"1692.86797"	"1692.86757"	"0.24"	"0.00020"	"10/110"	"10"	"110"	"175962.245849609"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"68.6408"	"22874"	"22874"	"22853"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.5"	""	"6.3"	""	"5.4"	""	"45.7"	""	"25.9"	"24.0"	""	"973"	"15"	"36.000"	"29.000"	"1.38702038714065"	"22"	"0.004022"	"0.04305"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLNDDGVDMK"	"[K].dNLNDDGVDMk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"847.42242"	"1693.83757"	"1693.84672"	"-5.40"	"-0.00457"	"12/114"	"12"	"114"	"206481.202636719"	"HCD"	"MS2"	"0"	"23.4"	"100.000"	"59.5550"	"19218"	"19218"	"19190"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.7"	""	"18.9"	""	"26.3"	""	"35.8"	""	"53.3"	"63.5"	""	"823"	"43"	"36.000"	"29.000"	"0.00193807169812346"	"21"	"0"	"0.0009335"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLNDDGVDMK"	"[K].dNLNDDGVDMk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"847.42566"	"1693.84404"	"1693.84672"	"-1.58"	"-0.00134"	"12/114"	"12"	"114"	"236494.125488281"	"HCD"	"MS2"	"34.15242"	"25.3"	"100.000"	"59.3251"	"19139"	"19139"	"19110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.3"	""	"22.0"	""	"19.3"	""	"40.4"	""	"61.1"	"66.3"	""	"885"	"37"	"36.000"	"29.000"	"0.00864795209180611"	"20"	"0"	"0.0008841"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDAAVDTSSEITTK"	"[M].sDAAVDTSSEITTk.[D]"	"N-Term(Prot)(Acetyl); K14(TMT6plex)"	"1"	"1"	"P06302"	"Prothymosin alpha OS=Rattus norvegicus OX=10116 GN=Ptma PE=1 SV=2"	"P06302"	"Prothymosin alpha OS=Rattus norvegicus OX=10116 GN=Ptma PE=1 SV=2"	"0"	"2"	"2"	"0.9718"	"0.0000"	"1"	"1"	"1"	"848.42664"	"1695.84599"	"1695.84861"	"-1.54"	"-0.00131"	"12/128"	"12"	"128"	"192225.564697266"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"67.2602"	"22327"	"22327"	"22300"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.6"	""	"14.1"	""	"8.5"	""	"11.7"	""	"20.3"	"16.5"	""	"819"	"71"	"36.000"	"29.000"	"3.42968241030959E-06"	"19"	"0"	"2.582E-06"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDAAVDTSSEITTK"	"[M].sDAAVDTSSEITTk.[D]"	"N-Term(Prot)(Acetyl); K14(TMT6plex)"	"1"	"1"	"P06302"	"Prothymosin alpha OS=Rattus norvegicus OX=10116 GN=Ptma PE=1 SV=2"	"P06302"	"Prothymosin alpha OS=Rattus norvegicus OX=10116 GN=Ptma PE=1 SV=2"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"848.42780"	"1695.84831"	"1695.84861"	"-0.17"	"-0.00015"	"11/128"	"11"	"128"	"168449.385681152"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"67.2779"	"22319"	"22319"	"22290"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.6"	""	"11.4"	""	"9.2"	""	"12.6"	""	"20.7"	"16.0"	""	"829"	"37"	"36.000"	"29.000"	"0.00780772547593522"	"17"	"0"	"9.12E-05"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"849.42126"	"1697.83525"	"1697.83660"	"-0.79"	"-0.00067"	"6/126"	"6"	"126"	"202863.042785645"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"62.7408"	"20492"	"20492"	"20465"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.4"	""	"17.7"	""	"17.4"	""	"15.6"	""	"20.8"	"17.2"	""	"740"	"27"	"35.000"	"28.000"	"0.0696950163111226"	"14"	"0"	"0.0007715"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"849.42126"	"1697.83525"	"1697.83660"	"-0.79"	"-0.00067"	"18/126"	"18"	"126"	"1716330.10748291"	"HCD"	"MS2"	"6.61942"	"79.4"	"100.000"	"63.0220"	"20606"	"20606"	"20589"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"147.0"	""	"110.2"	""	"108.0"	""	"89.8"	""	"147.0"	"150.6"	""	"740"	"44"	"35.000"	"28.000"	"0.00150384031791129"	"15"	"0"	"1.006E-05"	"0.902"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"849.42139"	"1697.83550"	"1697.83660"	"-0.65"	"-0.00055"	"8/126"	"8"	"126"	"1652892.25946045"	"HCD"	"MS2"	"5.397915"	"83.5"	"100.000"	"63.1523"	"20643"	"20643"	"20625"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"160.2"	""	"123.0"	""	"116.3"	""	"91.3"	"2.0"	"149.8"	"147.5"	""	"740"	"47"	"35.000"	"28.000"	"0.000767718001458317"	"15"	"0"	"7.816E-05"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"566.61670"	"1697.83554"	"1697.83660"	"-0.62"	"-0.00035"	"12/126"	"12"	"126"	"1240217.75390625"	"HCD"	"MS2"	"24.9431"	"27.2"	"100.000"	"63.0625"	"20607"	"20607"	"20583"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.0"	""	"36.3"	""	"40.2"	""	"45.4"	"0.5"	"47.2"	"51.6"	""	"740"	"52"	"35.000"	"28.000"	"0.000254215322805266"	"28"	"0"	"2.898E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"3"	"3"	"0.7719"	"0.0000"	"1"	"1"	"1"	"566.61676"	"1697.83573"	"1697.83660"	"-0.51"	"-0.00029"	"14/126"	"14"	"126"	"1379729.73724365"	"HCD"	"MS2"	"35.63283"	"27.4"	"100.000"	"62.9412"	"20573"	"20573"	"20551"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.0"	""	"36.9"	""	"41.4"	""	"37.2"	""	"46.3"	"57.6"	""	"738"	"57"	"35.000"	"28.000"	"7.24479942152501E-05"	""	"0"	"2.872E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"849.42188"	"1697.83647"	"1697.83660"	"-0.08"	"-0.00006"	"10/126"	"10"	"126"	"834019.020690918"	"HCD"	"MS2"	"13.91767"	"48.4"	"100.000"	"63.4568"	"20767"	"20767"	"20747"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"78.2"	""	"56.0"	""	"61.5"	""	"55.5"	"1.7"	"102.1"	"104.0"	""	"746"	"35"	"35.000"	"28.000"	"0.0110080104154656"	"15"	"0"	"0.0002777"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"849.42206"	"1697.83684"	"1697.83660"	"0.14"	"0.00012"	"7/126"	"7"	"126"	"1045200.9105835"	"HCD"	"MS2"	"13.06691"	"57.2"	"100.000"	"63.3031"	"20720"	"20720"	"20703"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.3"	""	"73.2"	""	"66.5"	""	"69.3"	""	"108.6"	"119.7"	""	"745"	"37"	"35.000"	"28.000"	"0.0075184147047138"	"15"	"0"	"0.0003076"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"849.42279"	"1697.83830"	"1697.83660"	"1.00"	"0.00085"	"4/126"	"4"	"126"	"185846.411437988"	"HCD"	"MS2"	"100"	"11.3"	"100.000"	"62.8483"	"20520"	"20520"	"20490"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.2"	""	"16.5"	""	"11.1"	""	"13.8"	""	"20.3"	"20.1"	""	"747"	"13"	"35.000"	"28.000"	"1.89361029540602"	"13"	"0"	"0.003644"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENEFSFEDNAIR"	"[R].eNEFSFEDNAIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZD32"	"Chromodomain-helicase-DNA-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Chd5 PE=1 SV=1"	"D3ZD32"	"Chromodomain-helicase-DNA-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Chd5 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"850.40918"	"1699.81108"	"1699.81249"	"-0.83"	"-0.00071"	"5/122"	"5"	"122"	"132517.072631836"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"78.0240"	"26683"	"26683"	"26663"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.8"	""	"9.1"	""	"10.6"	""	"17.9"	""	"12.1"	"14.9"	""	"532"	"12"	"34.000"	"27.000"	"1.73732727004228"	"19"	"0.003922"	"0.04074"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVETMNYADIER"	"[R].nVETmNYADIER.[T]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"850.41101"	"1699.81474"	"1699.81587"	"-0.66"	"-0.00056"	"6/126"	"6"	"126"	"467739.052185059"	"HCD"	"MS2"	"49.02913"	"34.6"	"100.000"	"52.6742"	"16428"	"16428"	"16408"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.0"	""	"42.6"	""	"49.0"	""	"65.1"	""	"63.0"	"67.9"	""	"545"	"14"	"34.000"	"27.000"	"1.07985764334607"	"20"	"0.001374"	"0.01627"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVETMNYADIER"	"[R].nVETmNYADIER.[T]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"0.3810"	"0.0000"	"1"	"1"	"1"	"850.41107"	"1699.81487"	"1699.81587"	"-0.59"	"-0.00050"	"7/126"	"7"	"126"	"364300.130432129"	"HCD"	"MS2"	"46.77168"	"24.8"	"100.000"	"52.9789"	"16541"	"16541"	"16517"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.2"	""	"22.6"	""	"35.7"	""	"54.0"	""	"48.9"	"42.3"	""	"546"	"21"	"34.000"	"27.000"	"0.215855265443952"	"27"	"0.0006732"	"0.008562"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAQGADSVEPMFR"	"[K].yAQGADSVEPMFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"850.41870"	"1699.83013"	"1699.83112"	"-0.59"	"-0.00050"	"5/122"	"5"	"122"	"104019.294250488"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"74.0100"	"25075"	"25075"	"25044"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.2"	""	"9.5"	""	"8.4"	""	"11.2"	""	"9.9"	"12.1"	""	"601"	"22"	"34.000"	"27.000"	"0.20551545000807"	"14"	"0.0023"	"0.0241"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAQGADSVEPMFR"	"[K].yAQGADSVEPMFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"850.41913"	"1699.83098"	"1699.83112"	"-0.08"	"-0.00007"	"6/122"	"6"	"122"	"108485.285888672"	"HCD"	"MS2"	"20.56603"	"6.0"	"100.000"	"74.1614"	"25123"	"25123"	"25098"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.4"	""	"9.1"	""	"8.5"	""	"8.4"	""	"12.0"	"8.9"	""	"623"	"24"	"34.000"	"27.000"	"0.113098814060887"	"14"	"0.0003538"	"0.007199"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAQGADSVEPMFR"	"[K].yAQGADSVEPMFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"567.28198"	"1699.83139"	"1699.83112"	"0.16"	"0.00009"	"9/122"	"9"	"122"	"149107.353271484"	"HCD"	"MS2"	"8.874407"	"6.5"	"100.000"	"74.4957"	"25259"	"25259"	"25233"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.6"	""	"6.6"	""	"5.6"	""	"10.4"	""	"10.0"	"17.1"	""	"624"	"22"	"34.000"	"27.000"	"0.191493745611416"	"19"	"0.004069"	"0.0442"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSTDVSVDEVK"	"[R].ySTDVSVDEVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.7105"	"0.0000"	"1"	"1"	"1"	"567.30963"	"1699.91434"	"1699.91545"	"-0.65"	"-0.00037"	"8/94"	"8"	"94"	"1581784.76013184"	"HCD"	"MS2"	"29.69392"	"49.2"	"100.000"	"68.2581"	"22718"	"22718"	"22694"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"74.1"	""	"57.8"	""	"70.2"	""	"79.4"	""	"91.4"	"94.1"	""	"959"	"38"	"36.000"	"29.000"	"0.0079577192211631"	"25"	"0"	"0.001724"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSTDVSVDEVK"	"[R].ySTDVSVDEVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"850.46094"	"1699.91460"	"1699.91545"	"-0.50"	"-0.00043"	"10/94"	"10"	"94"	"552771.724304199"	"HCD"	"MS2"	"0"	"50.4"	"100.000"	"68.4322"	"22803"	"22803"	"22783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.1"	""	"61.9"	""	"60.7"	""	"84.2"	"1.3"	"93.2"	"97.6"	""	"958"	"73"	"36.000"	"29.000"	"2.69361494766177E-06"	"23"	"0"	"3.765E-07"	"1.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSTDVSVDEVK"	"[R].ySTDVSVDEVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.7111"	"0.0000"	"1"	"1"	"1"	"567.30975"	"1699.91471"	"1699.91545"	"-0.44"	"-0.00025"	"9/94"	"9"	"94"	"2075102.47253418"	"HCD"	"MS2"	"3.947603"	"63.3"	"100.000"	"68.5603"	"22841"	"22841"	"22821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"104.2"	""	"89.2"	""	"75.0"	""	"101.6"	"0.9"	"108.7"	"120.0"	""	"958"	"45"	"36.000"	"29.000"	"0.00152523061290681"	"28"	"0"	"0.0002012"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSTDVSVDEVK"	"[R].ySTDVSVDEVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"567.30975"	"1699.91471"	"1699.91545"	"-0.44"	"-0.00025"	"8/94"	"8"	"94"	"2745195.46466064"	"HCD"	"MS2"	"14.5695"	"74.6"	"100.000"	"68.1599"	"22692"	"22692"	"22671"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"130.1"	""	"89.8"	""	"94.7"	""	"117.1"	""	"130.7"	"145.3"	""	"958"	"50"	"36.000"	"29.000"	"0.000514440928511457"	"24"	"0"	"5.502E-05"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSTDVSVDEVK"	"[R].ySTDVSVDEVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"850.46136"	"1699.91545"	"1699.91545"	"0.00"	"0.00000"	"10/94"	"10"	"94"	"761923.472351074"	"HCD"	"MS2"	"0"	"72.7"	"100.000"	"68.5577"	"22840"	"22840"	"22821"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"110.5"	""	"97.6"	""	"95.1"	""	"105.6"	""	"135.4"	"150.6"	""	"948"	"75"	"36.000"	"29.000"	"1.55875673035216E-06"	"24"	"0"	"1.651E-06"	"1.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSTDVSVDEVK"	"[R].ySTDVSVDEVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.9206"	"0.0000"	"1"	"1"	"1"	"850.46204"	"1699.91680"	"1699.91545"	"0.79"	"0.00067"	"10/94"	"10"	"94"	"866002.90411377"	"HCD"	"MS2"	"0"	"74.1"	"100.000"	"68.1276"	"22679"	"22679"	"22658"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"123.5"	""	"87.8"	""	"97.1"	""	"119.3"	"0.6"	"143.6"	"130.0"	""	"946"	"63"	"36.000"	"29.000"	"2.61132628779798E-05"	"22"	"0"	"1.313E-06"	"1.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSTDVSVDEVK"	"[R].ySTDVSVDEVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"850.46313"	"1699.91899"	"1699.91545"	"2.08"	"0.00177"	"7/94"	"7"	"94"	"583040.011169434"	"HCD"	"MS2"	"44.14535"	"54.1"	"100.000"	"68.2558"	"22717"	"22717"	"22694"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"95.4"	""	"72.5"	""	"66.6"	""	"82.2"	""	"99.4"	"99.3"	""	"953"	"27"	"36.000"	"29.000"	"0.0903780371457112"	"14"	"0"	"0.0009092"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQTVLENTNGK"	"[K].hQTVLENTnGk.[N]"	"N-Term(TMT6plex); N9(Deamidated); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"567.31708"	"1699.93668"	"1699.93792"	"-0.73"	"-0.00041"	"12/108"	"12"	"108"	"6057877.69012451"	"HCD"	"MS2"	"12.89356"	"165.2"	"100.000"	"32.6185"	"8277"	"8277"	"8259"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"270.9"	""	"184.8"	""	"207.5"	""	"286.2"	"0.2"	"308.7"	"307.3"	""	"942"	"54"	"36.000"	"29.000"	"0.000169441936858355"	"23"	"0"	"5.924E-05"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQTVLENTNGK"	"[K].hQTVLENTnGk.[N]"	"N-Term(TMT6plex); N9(Deamidated); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"567.31714"	"1699.93686"	"1699.93792"	"-0.62"	"-0.00035"	"12/108"	"12"	"108"	"4850753.65301514"	"HCD"	"MS2"	"27.89165"	"126.4"	"100.000"	"32.3290"	"8159"	"8159"	"8141"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"239.2"	""	"145.7"	""	"169.4"	""	"207.4"	""	"206.4"	"229.1"	""	"942"	"54"	"36.000"	"29.000"	"0.000174189072676505"	"22"	"0"	"1.412E-05"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQTVLENTNGK"	"[K].hQTVLENTnGk.[N]"	"N-Term(TMT6plex); N9(Deamidated); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.2712"	"0.0000"	"1"	"1"	"1"	"567.31750"	"1699.93796"	"1699.93792"	"0.02"	"0.00001"	"13/108"	"13"	"108"	"4835164.32495117"	"HCD"	"MS2"	"28.11248"	"142.9"	"100.000"	"32.3503"	"8161"	"8161"	"8144"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"245.8"	""	"166.9"	""	"183.5"	""	"227.8"	"1.7"	"268.1"	"259.9"	""	"938"	"59"	"36.000"	"29.000"	"5.36009939016402E-05"	"20"	"0"	"1.769E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQGLTVEQAEAVAR"	"[K].vQGLTVEQAEAVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"850.48102"	"1699.95476"	"1699.95401"	"0.44"	"0.00037"	"4/138"	"4"	"138"	"120211.700561523"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"76.8547"	"26210"	"26210"	"26192"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.7"	""	"8.5"	""	"8.3"	""	"19.2"	""	"11.1"	"21.0"	""	"901"	"7"	"36.000"	"29.000"	"9.24048561560916"	"13"	"0.004942"	"0.05427"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQGLTVEQAEAVAR"	"[K].vQGLTVEQAEAVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"850.48224"	"1699.95720"	"1699.95401"	"1.87"	"0.00159"	"6/138"	"6"	"138"	"131235.417114258"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"76.7725"	"26186"	"26186"	"26163"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.8"	""	"7.6"	""	"8.2"	""	"16.0"	""	"13.0"	"18.6"	""	"905"	"23"	"36.000"	"29.000"	"0.215089189739119"	"14"	"0.000936"	"0.01328"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQGLTVEQAEAVAR"	"[K].vQGLTVEQAEAVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"850.48340"	"1699.95952"	"1699.95401"	"3.24"	"0.00275"	"7/138"	"7"	"138"	"211784.190551758"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"76.4587"	"26059"	"26059"	"26034"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.0"	""	"13.1"	""	"14.3"	""	"19.8"	""	"24.2"	"20.5"	""	"892"	"32"	"36.000"	"29.000"	"0.0288625606623868"	"14"	"0"	"0.0004359"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQGLTVEQAEAVAR"	"[K].vQGLTVEQAEAVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9825"	"0.0000"	"1"	"1"	"1"	"850.48352"	"1699.95976"	"1699.95401"	"3.38"	"0.00288"	"19/138"	"19"	"138"	"288885.693359375"	"HCD"	"MS2"	"0"	"12.7"	"100.000"	"76.5662"	"26094"	"26094"	"26072"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.3"	""	"15.3"	""	"12.3"	""	"25.6"	""	"27.9"	"25.3"	""	"882"	"57"	"36.000"	"29.000"	"8.38375521446175E-05"	"17"	"0"	"3.643E-05"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPSGGEGIEPERR"	"[R].mGPSGGEGIEPERR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"567.62415"	"1700.85788"	"1700.85873"	"-0.50"	"-0.00028"	"8/122"	"8"	"122"	"2079299.39025879"	"HCD"	"MS2"	"31.50974"	"108.6"	"100.000"	"35.0391"	"9250"	"9250"	"9227"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"141.1"	"2.9"	"144.7"	""	"142.7"	""	"180.9"	""	"222.4"	"202.7"	""	"762"	"9"	"35.000"	"28.000"	"4.32439120771152"	"13"	"0.00912"	"0.1192"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENLLEEQGSIALR"	"[R].eNLLEEQGSIALR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.4400"	"0.0000"	"1"	"1"	"1"	"567.65009"	"1700.93570"	"1700.93803"	"-1.37"	"-0.00078"	"11/134"	"11"	"134"	"208541.222045898"	"HCD"	"MS2"	"11.88097"	"6.7"	"100.000"	"86.4967"	"30060"	"30060"	"30045"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.9"	""	"6.8"	""	"6.7"	""	"9.3"	""	"18.1"	"15.4"	""	"1055"	"25"	"37.000"	"30.000"	"0.18502161350998"	"28"	"0.000936"	"0.01247"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTPEEQLADK"	"[K].vLTPEEQLADk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"567.66541"	"1700.98166"	"1700.98347"	"-1.06"	"-0.00060"	"10/102"	"10"	"102"	"341448.217346191"	"HCD"	"MS2"	"18.01044"	"13.1"	"100.000"	"77.7530"	"26584"	"26584"	"26565"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.3"	""	"13.1"	""	"17.2"	""	"21.4"	""	"32.3"	"24.8"	""	"829"	"30"	"36.000"	"29.000"	"0.0380648861242444"	"18"	"0.001374"	"0.01781"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTPEEQLADK"	"[K].vLTPEEQLADk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"850.99487"	"1700.98247"	"1700.98347"	"-0.59"	"-0.00050"	"7/102"	"7"	"102"	"158852.63659668"	"HCD"	"MS2"	"27.70049"	"11.2"	"100.000"	"77.8809"	"26626"	"26626"	"26604"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.5"	""	"13.0"	""	"12.1"	""	"23.2"	""	"23.4"	"20.5"	""	"814"	"14"	"36.000"	"29.000"	"1.50520069170568"	"23"	"0.005001"	"0.05683"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTPEEQLADK"	"[K].vLTPEEQLADk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"567.66577"	"1700.98276"	"1700.98347"	"-0.42"	"-0.00024"	"10/102"	"10"	"102"	"387584.759765625"	"HCD"	"MS2"	"24.24135"	"16.1"	"100.000"	"77.8555"	"26616"	"26616"	"26594"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.1"	""	"21.9"	""	"21.3"	""	"31.4"	""	"35.5"	"27.5"	""	"814"	"34"	"36.000"	"29.000"	"0.0181800222005442"	"23"	"0.002056"	"0.02252"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTPEEQLADK"	"[K].vLTPEEQLADk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"850.99512"	"1700.98296"	"1700.98347"	"-0.30"	"-0.00026"	"5/102"	"5"	"102"	"170502.289550781"	"HCD"	"MS2"	"30.11997"	"13.6"	"100.000"	"77.8337"	"26616"	"26616"	"26601"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.8"	""	"13.6"	""	"15.4"	""	"30.6"	""	"23.2"	"32.8"	""	"814"	"11"	"36.000"	"29.000"	"3.38527854838787"	"13"	"0.004205"	"0.04589"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHQISSGDFPSLR"	"[R].eHQISSGDFPSLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.9464"	"0.0000"	"1"	"1"	"1"	"567.96283"	"1701.87394"	"1701.87576"	"-1.07"	"-0.00061"	"9/136"	"9"	"136"	"2235792.80108643"	"HCD"	"MS2"	"21.78402"	"21.5"	"100.000"	"56.4993"	"17986"	"17986"	"17958"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.2"	""	"26.7"	""	"29.2"	""	"32.4"	""	"42.7"	"39.1"	""	"848"	"57"	"36.000"	"29.000"	"9.49217762752976E-05"	"19"	"0"	"1.682E-06"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHQISSGDFPSLR"	"[R].eHQISSGDFPSLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"567.96295"	"1701.87430"	"1701.87576"	"-0.86"	"-0.00049"	"8/136"	"8"	"136"	"4889414.31903076"	"HCD"	"MS2"	"2.555588"	"29.4"	"100.000"	"56.7781"	"18100"	"18100"	"18086"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.3"	""	"35.7"	""	"38.2"	""	"43.9"	"1.3"	"55.8"	"55.1"	""	"873"	"52"	"36.000"	"29.000"	"0.000271634074476338"	"17"	"0"	"8.792E-06"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHQISSGDFPSLR"	"[R].eHQISSGDFPSLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"567.96313"	"1701.87485"	"1701.87576"	"-0.54"	"-0.00030"	"8/136"	"8"	"136"	"3559913.41906738"	"HCD"	"MS2"	"0"	"29.6"	"100.000"	"56.9734"	"18165"	"18165"	"18147"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.7"	""	"39.1"	""	"38.2"	""	"46.4"	""	"60.2"	"55.9"	""	"871"	"36"	"36.000"	"29.000"	"0.0112457431302137"	"15"	"0"	"6.779E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHQISSGDFPSLR"	"[R].eHQISSGDFPSLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.9836"	"0.0000"	"1"	"1"	"1"	"567.96356"	"1701.87613"	"1701.87576"	"0.22"	"0.00012"	"9/136"	"9"	"136"	"2434650.14849854"	"HCD"	"MS2"	"9.13284"	"24.1"	"100.000"	"56.6719"	"18042"	"18042"	"18020"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.2"	""	"32.5"	""	"36.9"	""	"39.0"	""	"44.0"	"39.4"	""	"874"	"61"	"36.000"	"29.000"	"3.6431867767878E-05"	"17"	"0"	"6.137E-06"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHQISSGDFPSLR"	"[R].eHQISSGDFPSLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"567.96399"	"1701.87741"	"1701.87576"	"0.97"	"0.00055"	"9/136"	"9"	"136"	"395674.728088379"	"HCD"	"MS2"	"22.34369"	"17.6"	"100.000"	"57.1304"	"18243"	"18243"	"18224"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.4"	"2.2"	"20.5"	""	"24.3"	""	"28.4"	""	"34.7"	"35.6"	""	"879"	"26"	"36.000"	"29.000"	"0.107636329479076"	"14"	"0"	"0.002194"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVAVLTQESFAEHR"	"[M].sSVAVLTQESFAEHR.[S]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"851.92194"	"1702.83660"	"1702.83949"	"-1.70"	"-0.00145"	"7/150"	"7"	"150"	"122803.350097656"	"HCD"	"MS2"	"0"	"0.5"	"100.000"	"82.9643"	"28670"	"28670"	"28652"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	""	""	""	""	""	""	"2.2"	"2.4"	"NoQuanLabels"	"654"	"55"	"35.000"	"28.000"	"0.00010704040722538"	"23"	"0"	"0.0005427"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVAVLTQESFAEHR"	"[M].sSVAVLTQESFAEHR.[S]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"851.92322"	"1702.83916"	"1702.83949"	"-0.19"	"-0.00017"	"7/150"	"7"	"150"	"109712.219177246"	"HCD"	"MS2"	"0"	"0.7"	"100.000"	"82.9558"	"28668"	"28668"	"28652"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	"2.1"	""	""	""	"2.8"	""	""	"2.4"	"NoQuanLabels"	"671"	"30"	"35.000"	"28.000"	"0.0347290196920919"	"16"	"0.0004639"	"0.007575"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVAVLTQESFAEHR"	"[M].sSVAVLTQESFAEHR.[S]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.8022"	"0.0000"	"1"	"1"	"1"	"851.92328"	"1702.83928"	"1702.83949"	"-0.12"	"-0.00010"	"12/150"	"12"	"150"	"223529.933227539"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"83.2360"	"28779"	"28779"	"28762"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.3"	""	"3.3"	""	"5.0"	""	"6.3"	""	"7.9"	"7.2"	"NoQuanLabels"	"671"	"91"	"35.000"	"28.000"	"2.45862630868103E-08"	""	"0"	"7.051E-08"	"1.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVAVLTQESFAEHR"	"[M].sSVAVLTQESFAEHR.[S]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.7662"	"0.0000"	"1"	"1"	"1"	"851.92383"	"1702.84038"	"1702.83949"	"0.52"	"0.00045"	"10/150"	"10"	"150"	"209896.049316406"	"HCD"	"MS2"	"11.07602"	"3.8"	"100.000"	"83.2420"	"28779"	"28779"	"28766"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.5"	""	"4.9"	""	"5.6"	""	"6.6"	""	"5.7"	"7.1"	"NoQuanLabels"	"670"	"77"	"35.000"	"28.000"	"7.32900144023101E-07"	""	"0"	"5.453E-06"	"0.96"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFQLDSPATPEK"	"[K].QLFQLDSPATPEk.[I]"	"K13(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"851.96356"	"1702.91985"	"1702.92132"	"-0.86"	"-0.00073"	"7/132"	"7"	"132"	"248760.932617188"	"HCD"	"MS2"	"11.44462"	"6.1"	"100.000"	"108.4917"	"37763"	"37763"	"37750"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.9"	""	"7.8"	""	"10.6"	""	"12.3"	""	"6.6"	"10.9"	""	"1068"	"30"	"37.000"	"30.000"	"0.0478124784803483"	"17"	"0.001546"	"0.01941"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFQLDSPATPEK"	"[K].QLFQLDSPATPEk.[I]"	"K13(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"851.96429"	"1702.92131"	"1702.92132"	"0.00"	"0.00000"	"7/132"	"7"	"132"	"269405.643798828"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"108.4532"	"37837"	"37837"	"37823"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.1"	""	"9.2"	""	"13.0"	""	"13.0"	""	"10.6"	"15.5"	""	"1073"	"47"	"37.000"	"30.000"	"0.00120107389084191"	"17"	"0"	"0.000263"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQDLQLEELK"	"[R].eQDLQLEELk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"851.98462"	"1702.96196"	"1702.96274"	"-0.46"	"-0.00039"	"7/102"	"7"	"102"	"117349.050048828"	"HCD"	"MS2"	"40.3682"	"6.1"	"100.000"	"83.4198"	"28846"	"28846"	"28831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.9"	""	"4.5"	""	"7.6"	""	"8.1"	""	"12.8"	"11.9"	""	"955"	"14"	"36.000"	"29.000"	"2.04631918489777"	"18"	"0.00379"	"0.03901"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAFSPADHDDFVI"	"[R].aAAFSPADHDDFVI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJS5"	"SH3 domain-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Sh3bp4 PE=1 SV=2"	"Q9JJS5"	"SH3 domain-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Sh3bp4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"852.92511"	"1704.84294"	"1704.84307"	"-0.07"	"-0.00006"	"4/118"	"4"	"118"	"51315.8573608398"	"HCD"	"MS2"	"0"	"0.7"	"100.000"	"102.3765"	"35790"	"35790"	"35785"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.2"	""	"2.2"	""	""	""	""	""	"2.1"	""	""	"707"	"6"	"35.000"	"28.000"	"9.80368656994426"	"13"	"0.003717"	"0.03805"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAFSPADHDDFVI"	"[R].aAAFSPADHDDFVI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJS5"	"SH3 domain-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Sh3bp4 PE=1 SV=2"	"Q9JJS5"	"SH3 domain-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Sh3bp4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"852.92542"	"1704.84355"	"1704.84307"	"0.29"	"0.00024"	"7/118"	"7"	"118"	"140388.823059082"	"HCD"	"MS2"	"0"	"1.6"	"100.000"	"102.2414"	"35689"	"35689"	"35684"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	"3.6"	""	"2.9"	""	"2.6"	""	"1.8"	"4.4"	""	"722"	"34"	"35.000"	"28.000"	"0.0134743306964255"	"15"	"0"	"0.001164"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAFSPADHDDFVI"	"[R].aAAFSPADHDDFVI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJS5"	"SH3 domain-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Sh3bp4 PE=1 SV=2"	"Q9JJS5"	"SH3 domain-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Sh3bp4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"852.92578"	"1704.84429"	"1704.84307"	"0.72"	"0.00061"	"5/118"	"5"	"118"	"91988.0643310547"	"HCD"	"MS2"	"0"	"0.9"	"100.000"	"102.1183"	"35711"	"35711"	"35704"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	""	""	"3.1"	""	"2.3"	""	"2.8"	""	""	"722"	"21"	"35.000"	"28.000"	"0.284778502460298"	"14"	"0.001886"	"0.02187"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"853.41656"	"1705.82585"	"1705.83045"	"-2.70"	"-0.00230"	"5/106"	"5"	"106"	"132058.558166504"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"81.1852"	"27960"	"27960"	"27940"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.3"	""	"8.1"	""	"7.7"	""	"22.6"	""	"14.6"	"16.7"	""	"564"	"5"	"34.000"	"27.000"	"8.26511895160591"	"14"	"0.007752"	"0.09498"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.28088"	"1705.82810"	"1705.83045"	"-1.38"	"-0.00079"	"9/106"	"9"	"106"	"297166.311523438"	"HCD"	"MS2"	"7.137746"	"8.8"	"100.000"	"82.0316"	"28302"	"28302"	"28281"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.2"	""	"8.5"	""	"16.4"	""	"15.2"	""	"16.3"	"17.7"	""	"588"	"23"	"34.000"	"27.000"	"0.148370421483677"	"14"	"0.006769"	"0.07917"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"853.41779"	"1705.82829"	"1705.83045"	"-1.27"	"-0.00108"	"8/106"	"8"	"106"	"115143.402099609"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"81.2343"	"27981"	"27981"	"27962"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.5"	""	"4.6"	""	"9.4"	""	"14.8"	""	"10.0"	"14.2"	""	"587"	"14"	"34.000"	"27.000"	"1.25489707085491"	"15"	"0.003449"	"0.03487"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"853.41797"	"1705.82866"	"1705.83045"	"-1.05"	"-0.00090"	"13/106"	"13"	"106"	"274649.217346191"	"HCD"	"MS2"	"9.00724"	"15.7"	"100.000"	"82.0378"	"28301"	"28301"	"28287"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.1"	""	"12.5"	""	"15.1"	""	"40.8"	""	"29.9"	"33.9"	""	"592"	"27"	"34.000"	"27.000"	"0.0549910118707143"	"21"	"0.0008629"	"0.01071"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"569.28125"	"1705.82920"	"1705.83045"	"-0.74"	"-0.00042"	"9/106"	"9"	"106"	"306391.430786133"	"HCD"	"MS2"	"17.80943"	"8.0"	"100.000"	"81.9432"	"28263"	"28263"	"28243"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.2"	""	"6.1"	""	"13.8"	""	"13.5"	""	"15.8"	"15.5"	""	"596"	"27"	"34.000"	"27.000"	"0.0565218364520922"	"17"	"0.001211"	"0.01474"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"853.41833"	"1705.82939"	"1705.83045"	"-0.62"	"-0.00053"	"10/106"	"10"	"106"	"538380.253234863"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"81.5483"	"28108"	"28108"	"28091"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.7"	""	"28.1"	""	"29.5"	""	"65.5"	"0.8"	"49.1"	"50.8"	""	"597"	"42"	"34.000"	"27.000"	"0.00187044238604692"	"17"	"0"	"0.002923"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.41846"	"1705.82964"	"1705.83045"	"-0.48"	"-0.00041"	"15/106"	"15"	"106"	"507176.735717773"	"HCD"	"MS2"	"0"	"26.2"	"100.000"	"81.8263"	"28219"	"28219"	"28204"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.2"	""	"24.0"	""	"21.8"	""	"66.3"	""	"51.1"	"61.2"	""	"598"	"18"	"34.000"	"27.000"	"0.438198804445817"	"14"	"0.002973"	"0.02863"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"853.41852"	"1705.82976"	"1705.83045"	"-0.41"	"-0.00035"	"11/106"	"11"	"106"	"208460.804382324"	"HCD"	"MS2"	"14.40801"	"11.3"	"100.000"	"82.1101"	"28333"	"28333"	"28323"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.5"	""	"7.8"	""	"11.9"	""	"30.5"	""	"21.0"	"24.3"	""	"598"	"20"	"34.000"	"27.000"	"0.286860788823264"	"22"	"0.001211"	"0.01473"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"853.41870"	"1705.83013"	"1705.83045"	"-0.19"	"-0.00016"	"11/106"	"11"	"106"	"708729.693969727"	"HCD"	"MS2"	"0"	"32.7"	"100.000"	"81.4509"	"28066"	"28066"	"28059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.6"	""	"26.0"	""	"39.6"	""	"78.8"	"1.3"	"58.9"	"71.4"	""	"601"	"50"	"34.000"	"27.000"	"0.000291638245157269"	"18"	"0"	"0.002498"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"853.41882"	"1705.83037"	"1705.83045"	"-0.05"	"-0.00004"	"8/106"	"8"	"106"	"441461.775146484"	"HCD"	"MS2"	"0"	"20.5"	"100.000"	"81.7380"	"28181"	"28181"	"28162"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.2"	""	"14.3"	""	"21.1"	""	"56.6"	"2.1"	"45.0"	"34.5"	""	"601"	"39"	"34.000"	"27.000"	"0.00356323508824232"	"16"	"0.0001301"	"0.004141"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSVVAFTPDGER"	"[R].tTPSVVAFTPDGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"853.45056"	"1705.89385"	"1705.89583"	"-1.16"	"-0.00099"	"10/128"	"10"	"128"	"424210.098388672"	"HCD"	"MS2"	"0"	"22.5"	"100.000"	"72.2365"	"24354"	"24354"	"24325"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.6"	""	"28.0"	""	"25.8"	""	"39.6"	""	"39.9"	"41.4"	""	"984"	"66"	"36.000"	"29.000"	"1.33956904357433E-05"	"25"	"0"	"2.276E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSVVAFTPDGER"	"[R].tTPSVVAFTPDGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"853.45068"	"1705.89409"	"1705.89583"	"-1.02"	"-0.00087"	"12/128"	"12"	"128"	"189602.74017334"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"72.3167"	"24373"	"24373"	"24346"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.7"	""	"13.6"	""	"15.7"	""	"20.9"	""	"22.5"	"20.3"	""	"996"	"47"	"36.000"	"29.000"	"0.000991355322815621"	"25"	"0"	"0.0004913"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSVVAFTPDGER"	"[R].tTPSVVAFTPDGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"3"	"3"	"0.9400"	"0.0000"	"1"	"1"	"1"	"569.30310"	"1705.89475"	"1705.89583"	"-0.63"	"-0.00036"	"14/128"	"14"	"128"	"1293238.97998047"	"HCD"	"MS2"	"2.719603"	"18.8"	"100.000"	"72.7135"	"24534"	"24534"	"24515"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.1"	""	"23.6"	""	"27.1"	""	"32.4"	""	"34.4"	"35.7"	""	"983"	"50"	"36.000"	"29.000"	"0.000515850103682617"	"19"	"0"	"0.000869"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSVVAFTPDGER"	"[R].tTPSVVAFTPDGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"3"	"3"	"0.8971"	"0.0000"	"1"	"1"	"1"	"569.30310"	"1705.89475"	"1705.89583"	"-0.63"	"-0.00036"	"14/128"	"14"	"128"	"2225313.91113281"	"HCD"	"MS2"	"1.947756"	"18.5"	"100.000"	"72.4049"	"24422"	"24422"	"24405"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.5"	""	"21.1"	""	"30.1"	""	"30.7"	""	"33.4"	"34.3"	""	"983"	"68"	"36.000"	"29.000"	"8.64019456260699E-06"	"24"	"0"	"0.000192"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSVVAFTPDGER"	"[R].tTPSVVAFTPDGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"853.45142"	"1705.89556"	"1705.89583"	"-0.16"	"-0.00014"	"10/128"	"10"	"128"	"707665.487731934"	"HCD"	"MS2"	"0"	"29.6"	"100.000"	"72.5206"	"24469"	"24469"	"24452"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.8"	""	"32.6"	""	"38.9"	""	"43.5"	""	"49.6"	"69.5"	""	"986"	"63"	"36.000"	"29.000"	"2.40905613156017E-05"	"23"	"0"	"3.489E-05"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSVVAFTPDGER"	"[R].tTPSVVAFTPDGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.8548"	"0.0000"	"1"	"1"	"1"	"853.45154"	"1705.89580"	"1705.89583"	"-0.02"	"-0.00002"	"19/128"	"19"	"128"	"848030.296691895"	"HCD"	"MS2"	"0"	"37.1"	"100.000"	"72.5956"	"24486"	"24486"	"24471"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.4"	""	"37.0"	""	"48.7"	""	"65.4"	"2.2"	"64.4"	"67.8"	""	"984"	"62"	"36.000"	"29.000"	"3.30342995639569E-05"	"26"	"0"	"3.074E-06"	"1.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPAVVSLEYGVAR"	"[K].sEPAVVSLEYGVAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2JXT6"	"Myotubularin-related protein 6 OS=Rattus norvegicus OX=10116 GN=Mtmr6 PE=1 SV=1"	"A0A0G2JXT6"	"Myotubularin-related protein 6 OS=Rattus norvegicus OX=10116 GN=Mtmr6 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.31512"	"1705.93082"	"1705.93222"	"-0.82"	"-0.00047"	"7/120"	"7"	"120"	"221639.281311035"	"HCD"	"MS2"	"34.86893"	"8.2"	"100.000"	"82.2346"	"28383"	"28383"	"28363"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.6"	""	"8.0"	""	"19.5"	""	"12.0"	""	"13.3"	"16.4"	""	"1114"	"19"	"37.000"	"30.000"	"0.649912956702957"	"14"	"0.0003538"	"0.006794"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPAVVSLEYGVAR"	"[K].sEPAVVSLEYGVAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2JXT6"	"Myotubularin-related protein 6 OS=Rattus norvegicus OX=10116 GN=Mtmr6 PE=1 SV=1"	"A0A0G2JXT6"	"Myotubularin-related protein 6 OS=Rattus norvegicus OX=10116 GN=Mtmr6 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.31543"	"1705.93174"	"1705.93222"	"-0.28"	"-0.00016"	"8/120"	"8"	"120"	"209245.358642578"	"HCD"	"MS2"	"70.9681"	"7.8"	"100.000"	"82.1484"	"28346"	"28346"	"28323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.4"	""	"7.4"	""	"19.3"	""	"8.2"	""	"12.1"	"15.5"	""	"1107"	"24"	"37.000"	"30.000"	"0.214841227575824"	"14"	"0"	"0.001319"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIEAMDPSILK"	"[K].dIEAmDPSILk.[G]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"853.47583"	"1705.94438"	"1705.94464"	"-0.15"	"-0.00013"	"7/94"	"7"	"94"	"80178.2406616211"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"80.1085"	"27524"	"27524"	"27498"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.1"	""	"5.0"	""	"4.6"	""	"12.4"	""	"9.0"	"10.4"	""	"1177"	"11"	"37.000"	"30.000"	"4.65314372577897"	"14"	"0.005617"	"0.06367"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANDFNPDADAK"	"[R].aANDFNPDADAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"569.62689"	"1706.86612"	"1706.87498"	"-5.19"	"-0.00295"	"14/118"	"14"	"118"	"1789017.53814697"	"HCD"	"MS2"	"32.76339"	"41.6"	"100.000"	"52.5639"	"16383"	"16383"	"16360"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.1"	""	"56.4"	""	"64.6"	""	"59.0"	""	"71.3"	"73.7"	""	"880"	"36"	"36.000"	"29.000"	"0.0116265985322166"	"23"	"0"	"0.001246"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANDFNPDADAK"	"[R].aANDFNPDADAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9012"	"0.0000"	"1"	"1"	"1"	"853.93964"	"1706.87200"	"1706.87498"	"-1.75"	"-0.00149"	"20/118"	"20"	"118"	"2041206.10900879"	"HCD"	"MS2"	"0"	"163.6"	"100.000"	"52.9996"	"16549"	"16549"	"16533"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"326.7"	""	"205.7"	""	"225.7"	""	"256.5"	"3.0"	"271.4"	"256.8"	""	"916"	"81"	"36.000"	"29.000"	"3.60466971680355E-07"	"26"	"0"	"5.153E-07"	"1.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANDFNPDADAK"	"[R].aANDFNPDADAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"853.94006"	"1706.87285"	"1706.87498"	"-1.25"	"-0.00107"	"20/118"	"20"	"118"	"1699386.69372559"	"HCD"	"MS2"	"0"	"142.0"	"100.000"	"52.6905"	"16435"	"16435"	"16422"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"282.5"	""	"180.8"	""	"196.4"	""	"220.4"	""	"223.6"	"238.8"	""	"923"	"84"	"36.000"	"29.000"	"1.95061565483576E-07"	"24"	"0"	"1.164E-07"	"1.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANDFNPDADAK"	"[R].aANDFNPDADAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.62939"	"1706.87363"	"1706.87498"	"-0.79"	"-0.00045"	"12/118"	"12"	"118"	"1606683.96606445"	"HCD"	"MS2"	"35.35746"	"61.9"	"100.000"	"53.1553"	"16624"	"16624"	"16606"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.7"	""	"74.9"	""	"89.2"	""	"93.5"	""	"111.4"	"117.6"	""	"936"	"27"	"36.000"	"29.000"	"0.0873465695310626"	"14"	"0"	"0.001768"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANDFNPDADAK"	"[R].aANDFNPDADAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.62946"	"1706.87381"	"1706.87498"	"-0.69"	"-0.00039"	"12/118"	"12"	"118"	"2317516.88043213"	"HCD"	"MS2"	"25.71244"	"81.0"	"100.000"	"53.3908"	"16709"	"16709"	"16690"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"131.8"	""	"105.0"	""	"103.7"	""	"122.0"	"0.2"	"154.2"	"150.1"	""	"936"	"32"	"36.000"	"29.000"	"0.0320070650927709"	"14"	"0"	"0.0005329"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANDFNPDADAK"	"[R].aANDFNPDADAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"853.94073"	"1706.87419"	"1706.87498"	"-0.46"	"-0.00040"	"20/118"	"20"	"118"	"1186702.82208252"	"HCD"	"MS2"	"0"	"100.3"	"100.000"	"53.3126"	"16677"	"16677"	"16658"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"193.7"	""	"125.9"	""	"138.7"	""	"151.7"	"0.7"	"162.9"	"174.3"	""	"945"	"81"	"36.000"	"29.000"	"3.8317909983594E-07"	"23"	"0"	"3.167E-07"	"1.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANDFNPDADAK"	"[R].aANDFNPDADAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.8727"	"0.0000"	"1"	"1"	"1"	"569.62964"	"1706.87436"	"1706.87498"	"-0.36"	"-0.00021"	"14/118"	"14"	"118"	"10194576.0852051"	"HCD"	"MS2"	"5.702618"	"270.1"	"100.000"	"53.0734"	"16580"	"16580"	"16563"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"530.3"	""	"346.3"	""	"370.7"	""	"416.6"	"0.2"	"458.8"	"430.1"	""	"954"	"55"	"36.000"	"29.000"	"0.000142402750922387"	"23"	"0"	"8.601E-05"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANDFNPDADAK"	"[R].aANDFNPDADAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9140"	"0.0000"	"1"	"1"	"1"	"853.94092"	"1706.87456"	"1706.87498"	"-0.25"	"-0.00021"	"11/118"	"11"	"118"	"1365340.9576416"	"HCD"	"MS2"	"0"	"113.5"	"100.000"	"53.0081"	"16564"	"16564"	"16545"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"218.2"	""	"133.0"	""	"152.5"	""	"171.4"	""	"195.6"	"203.0"	""	"946"	"93"	"36.000"	"29.000"	"2.43142647198487E-08"	"26"	"0"	"1.368E-07"	"1.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANDFNPDADAK"	"[R].aANDFNPDADAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"569.62976"	"1706.87473"	"1706.87498"	"-0.15"	"-0.00009"	"14/118"	"14"	"118"	"11856758.2475586"	"HCD"	"MS2"	"4.277807"	"245.0"	"77.091"	"52.8491"	"16499"	"16499"	"16481"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"461.6"	""	"317.5"	""	"345.3"	""	"385.3"	""	"386.0"	"421.1"	""	"946"	"63"	"36.000"	"29.000"	"2.62337962229092E-05"	"24"	"0"	"4.685E-05"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYEPQEDPGVK"	"[K].sYEPQEDPGVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.95355"	"1706.89983"	"1706.90014"	"-0.18"	"-0.00015"	"7/104"	"7"	"104"	"82550.0717773438"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"50.6202"	"15580"	"15580"	"15550"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.6"	""	"8.4"	""	"5.0"	""	"6.0"	""	"12.9"	"10.0"	""	"1106"	"14"	"37.000"	"30.000"	"2.06883155314446"	"14"	"0.00599"	"0.0695"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYEPQEDPGVK"	"[K].sYEPQEDPGVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.95355"	"1706.89983"	"1706.90014"	"-0.18"	"-0.00015"	"7/104"	"7"	"104"	"1436400.27819824"	"HCD"	"MS2"	"0"	"106.0"	"100.000"	"49.9848"	"15320"	"15320"	"15294"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"197.5"	""	"148.3"	""	"144.1"	""	"165.2"	""	"184.1"	"168.9"	""	"1106"	"26"	"37.000"	"30.000"	"0.133882906284511"	"14"	"0"	"0.001498"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYEPQEDPGVK"	"[K].sYEPQEDPGVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"853.95374"	"1706.90019"	"1706.90014"	"0.03"	"0.00003"	"4/104"	"4"	"104"	"102047.343017578"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"50.1660"	"15406"	"15406"	"15378"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.7"	""	"13.3"	""	"8.7"	""	"8.9"	""	"9.8"	"16.1"	""	"1094"	"13"	"37.000"	"30.000"	"2.99217731703003"	"14"	"0.006769"	"0.07902"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYEPQEDPGVK"	"[K].sYEPQEDPGVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"853.95380"	"1706.90032"	"1706.90014"	"0.11"	"0.00009"	"6/104"	"6"	"104"	"827397.366760254"	"HCD"	"MS2"	"0"	"61.9"	"100.000"	"49.5442"	"15152"	"15152"	"15126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"119.4"	""	"88.0"	""	"92.2"	""	"90.2"	""	"106.8"	"91.3"	""	"1090"	"38"	"37.000"	"30.000"	"0.00815448432571466"	"17"	"0"	"0.0009184"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYEPQEDPGVK"	"[K].sYEPQEDPGVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"853.95386"	"1706.90044"	"1706.90014"	"0.18"	"0.00015"	"8/104"	"8"	"104"	"1534166.97619629"	"HCD"	"MS2"	"0"	"104.2"	"100.000"	"50.2798"	"15440"	"15440"	"15422"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"204.4"	""	"126.4"	""	"153.0"	""	"128.4"	"0.9"	"180.5"	"191.9"	""	"1090"	"47"	"37.000"	"30.000"	"0.00114392223657482"	"20"	"0"	"0.0002131"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYEPQEDPGVK"	"[K].sYEPQEDPGVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.8788"	"0.0000"	"1"	"1"	"1"	"569.63849"	"1706.90091"	"1706.90014"	"0.45"	"0.00026"	"13/104"	"13"	"104"	"5731819.06842041"	"HCD"	"MS2"	"7.025371"	"144.1"	"100.000"	"50.2754"	"15439"	"15439"	"15422"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"240.0"	""	"183.5"	""	"215.1"	""	"189.7"	"1.0"	"258.1"	"276.9"	""	"1102"	"33"	"37.000"	"30.000"	"0.0266778974538839"	"19"	"0"	"0.0005884"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYEPQEDPGVK"	"[K].sYEPQEDPGVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"569.63849"	"1706.90091"	"1706.90014"	"0.45"	"0.00026"	"6/104"	"6"	"104"	"4341275.98779297"	"HCD"	"MS2"	"41.24828"	"112.9"	"100.000"	"49.9734"	"15315"	"15315"	"15294"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"224.8"	""	"155.7"	""	"142.7"	""	"164.2"	"0.4"	"187.5"	"192.3"	""	"1102"	"37"	"37.000"	"30.000"	"0.0119165790657359"	"18"	"0"	"0.001352"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYEPQEDPGVK"	"[K].sYEPQEDPGVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"569.63849"	"1706.90091"	"1706.90014"	"0.45"	"0.00026"	"12/104"	"12"	"104"	"7319062.35150146"	"HCD"	"MS2"	"4.852331"	"170.4"	"100.000"	"49.8347"	"15271"	"15271"	"15254"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"312.0"	""	"220.9"	""	"231.5"	""	"242.9"	""	"297.1"	"308.9"	""	"1102"	"42"	"37.000"	"30.000"	"0.00367410529836706"	"21"	"0"	"0.0003695"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYEPQEDPGVK"	"[K].sYEPQEDPGVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"853.95416"	"1706.90105"	"1706.90014"	"0.53"	"0.00046"	"9/104"	"9"	"104"	"2265167.74536133"	"HCD"	"MS2"	"0"	"149.1"	"100.000"	"49.8391"	"15272"	"15272"	"15254"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"284.0"	""	"192.9"	""	"234.8"	""	"201.2"	""	"248.7"	"249.8"	""	"1102"	"54"	"37.000"	"30.000"	"0.000244991828375479"	"22"	"0"	"1.725E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYEPQEDPGVK"	"[K].sYEPQEDPGVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"569.63910"	"1706.90274"	"1706.90014"	"1.53"	"0.00087"	"8/104"	"8"	"104"	"3442878.59204102"	"HCD"	"MS2"	"49.95202"	"98.5"	"100.000"	"49.5464"	"15153"	"15153"	"15126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"166.7"	""	"131.3"	""	"129.2"	""	"148.0"	""	"196.4"	"167.5"	""	"1099"	"17"	"37.000"	"30.000"	"1.11421165437694"	"14"	"0.0001301"	"0.004229"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDTVDSTTDIK"	"[K].gPDTVDSTTDIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"853.96210"	"1706.91692"	"1706.92127"	"-2.55"	"-0.00217"	"15/102"	"15"	"102"	"473862.004821777"	"HCD"	"MS2"	"0"	"49.1"	"100.000"	"54.3530"	"17099"	"17099"	"17072"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"79.3"	""	"51.1"	""	"54.3"	""	"98.9"	""	"95.4"	"89.8"	""	"1075"	"54"	"37.000"	"30.000"	"0.000209593817838642"	"24"	"0"	"0.0002288"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDTVDSTTDIK"	"[K].gPDTVDSTTDIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"569.64423"	"1706.91812"	"1706.92127"	"-1.84"	"-0.00105"	"12/102"	"12"	"102"	"3501769.48968506"	"HCD"	"MS2"	"30.55456"	"96.5"	"100.000"	"54.1773"	"17042"	"17042"	"17017"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"127.5"	""	"95.0"	""	"114.3"	""	"198.1"	"2.5"	"187.3"	"190.9"	""	"1094"	"54"	"37.000"	"30.000"	"0.000200903418372452"	"26"	"0"	"0.0002828"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDTVDSTTDIK"	"[K].gPDTVDSTTDIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"853.96326"	"1706.91924"	"1706.92127"	"-1.19"	"-0.00101"	"9/102"	"9"	"102"	"735490.332336426"	"HCD"	"MS2"	"0"	"68.0"	"100.000"	"54.1313"	"17023"	"17023"	"17002"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"111.1"	""	"70.5"	""	"74.2"	""	"123.7"	""	"127.9"	"142.7"	""	"1136"	"55"	"37.000"	"30.000"	"0.000175528780566772"	"23"	"0"	"2.38E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDTVDSTTDIK"	"[K].gPDTVDSTTDIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"569.64465"	"1706.91941"	"1706.92127"	"-1.09"	"-0.00062"	"12/102"	"12"	"102"	"3634726.57751465"	"HCD"	"MS2"	"16.38914"	"95.7"	"100.000"	"54.4669"	"17145"	"17145"	"17120"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"139.4"	""	"111.1"	""	"105.9"	""	"181.0"	"0.0"	"186.5"	"184.3"	""	"1135"	"56"	"37.000"	"30.000"	"0.000128518564455906"	"28"	"0"	"0.0001876"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDTVDSTTDIK"	"[K].gPDTVDSTTDIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"853.96405"	"1706.92082"	"1706.92127"	"-0.26"	"-0.00022"	"16/102"	"16"	"102"	"614405.34375"	"HCD"	"MS2"	"0"	"56.3"	"100.000"	"54.4419"	"17147"	"17147"	"17129"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.7"	""	"50.1"	""	"69.3"	""	"105.1"	""	"108.4"	"119.9"	""	"1142"	"50"	"37.000"	"30.000"	"0.000537818959614543"	"24"	"0"	"0.0003747"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDTVDSTTDIK"	"[K].gPDTVDSTTDIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8226"	"0.0000"	"1"	"1"	"1"	"853.96429"	"1706.92131"	"1706.92127"	"0.03"	"0.00002"	"20/102"	"20"	"102"	"971927.579223633"	"HCD"	"MS2"	"0"	"89.5"	"100.000"	"54.6499"	"17219"	"17219"	"17200"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"117.4"	""	"89.5"	""	"105.5"	""	"164.5"	"0.8"	"179.2"	"192.9"	""	"1138"	"62"	"37.000"	"30.000"	"3.62336651396604E-05"	"27"	"0"	"3.9E-07"	"1.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDTVDSTTDIK"	"[K].gPDTVDSTTDIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"853.96893"	"1706.93059"	"1706.92127"	"5.46"	"0.00466"	"13/102"	"13"	"102"	"290727.564208984"	"HCD"	"MS2"	"0"	"29.3"	"100.000"	"54.0622"	"16995"	"16995"	"16971"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.4"	""	"32.7"	""	"31.7"	""	"60.2"	"0.4"	"54.9"	"55.5"	""	"1170"	"47"	"37.000"	"30.000"	"0.00128574802557912"	"24"	"0"	"0.003771"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMNDAAMFYTNR"	"[K].eMNDAAmFYTNR.[V]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"854.38745"	"1707.76763"	"1707.76681"	"0.48"	"0.00041"	"5/124"	"5"	"124"	"98843.2969360352"	"HCD"	"MS2"	"21.68816"	"7.0"	"100.000"	"63.6730"	"20856"	"20856"	"20827"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.8"	""	"9.8"	""	"10.2"	""	"13.7"	""	"11.6"	"14.7"	""	"286"	"2"	"31.000"	"24.000"	"8.2858303589044"	"13"	"0.007413"	"0.08851"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANDFNPDADAK"	"[R].aAnDFNPDADAk.[G]"	"N-Term(TMT6plex); N3(Deamidated); K12(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"854.43225"	"1707.85723"	"1707.85900"	"-1.04"	"-0.00089"	"10/118"	"10"	"118"	"110346.887573242"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"56.7365"	"18083"	"18083"	"18054"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.9"	""	"14.3"	""	"14.3"	""	"21.6"	""	"12.8"	"21.2"	""	"873"	"30"	"36.000"	"29.000"	"0.0439525673453813"	"14"	"0"	"0.00187"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANDFNPDADAK"	"[R].aAnDFNPDADAk.[G]"	"N-Term(TMT6plex); N3(Deamidated); K12(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"854.43243"	"1707.85759"	"1707.85900"	"-0.83"	"-0.00070"	"8/118"	"8"	"118"	"121976.492553711"	"HCD"	"MS2"	"0"	"11.0"	"100.000"	"55.4693"	"17552"	"17552"	"17527"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.5"	""	"15.7"	""	"11.9"	""	"18.8"	""	"22.0"	"18.1"	""	"864"	"22"	"36.000"	"29.000"	"0.253795400292864"	"18"	"0.0002479"	"0.006003"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAEDGNANFLGK"	"[K].dAEDGNANFLGk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"854.94934"	"1708.89141"	"1708.89063"	"0.45"	"0.00039"	"13/106"	"13"	"106"	"166706.456542969"	"HCD"	"MS2"	"19.75659"	"17.2"	"100.000"	"68.5046"	"22819"	"22819"	"22789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.4"	""	"19.9"	""	"23.2"	""	"31.3"	""	"30.7"	"27.0"	""	"1084"	"45"	"37.000"	"30.000"	"0.00184501238817943"	"15"	"0"	"0.0009318"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAEDGNANFLGK"	"[K].dAEDGNANFLGk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"854.94983"	"1708.89238"	"1708.89063"	"1.02"	"0.00087"	"9/106"	"9"	"106"	"165566.374633789"	"HCD"	"MS2"	"0"	"17.0"	"100.000"	"68.3327"	"22763"	"22763"	"22735"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.4"	""	"19.7"	""	"20.4"	""	"29.7"	""	"30.2"	"34.6"	""	"1077"	"23"	"37.000"	"30.000"	"0.253621290264759"	"14"	"0.005617"	"0.06324"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPEHELNVDPQR"	"[R].fPEHELNVDPQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"570.63129"	"1709.87931"	"1709.88085"	"-0.90"	"-0.00051"	"6/110"	"6"	"110"	"1024831.2331543"	"HCD"	"MS2"	"39.11293"	"19.8"	"100.000"	"58.1251"	"18634"	"18634"	"18607"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.5"	""	"25.1"	""	"23.7"	""	"34.2"	""	"35.3"	"43.0"	""	"983"	"33"	"36.000"	"29.000"	"0.0259133476889318"	"15"	"0"	"0.0002264"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPEHELNVDPQR"	"[R].fPEHELNVDPQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"570.63147"	"1709.87986"	"1709.88085"	"-0.58"	"-0.00033"	"6/110"	"6"	"110"	"1031231.11425781"	"HCD"	"MS2"	"36.09352"	"19.6"	"100.000"	"57.9227"	"18566"	"18566"	"18543"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.0"	""	"27.9"	""	"23.5"	""	"30.2"	""	"36.3"	"38.2"	""	"971"	"30"	"36.000"	"29.000"	"0.0496808747752306"	"14"	"0"	"8.71E-05"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPEHELNVDPQR"	"[R].fPEHELNVDPQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"570.63159"	"1709.88022"	"1709.88085"	"-0.37"	"-0.00021"	"6/110"	"6"	"110"	"997117.12310791"	"HCD"	"MS2"	"34.11307"	"20.0"	"100.000"	"58.1596"	"18648"	"18648"	"18623"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.7"	""	"23.8"	""	"27.2"	""	"32.1"	""	"34.9"	"38.2"	""	"1008"	"34"	"37.000"	"30.000"	"0.0209618947688987"	"15"	"0"	"2.688E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPPVSEPLDVVGR"	"[R].sEPPVSEPLDVVGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O88588"	"Phosphofurin acidic cluster sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Pacs1 PE=1 SV=1"	"O88588"	"Phosphofurin acidic cluster sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Pacs1 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"855.46552"	"1709.92375"	"1709.92713"	"-1.97"	"-0.00169"	"5/122"	"5"	"122"	"117387.112548828"	"HCD"	"MS2"	"35.1883"	"5.3"	"100.000"	"75.9748"	"25854"	"25854"	"25823"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.3"	""	"4.6"	""	"7.8"	""	"12.4"	""	"9.2"	"8.6"	""	"1076"	"19"	"37.000"	"30.000"	"0.626299803822845"	"17"	"0.0008629"	"0.009602"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPPVSEPLDVVGR"	"[R].sEPPVSEPLDVVGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O88588"	"Phosphofurin acidic cluster sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Pacs1 PE=1 SV=1"	"O88588"	"Phosphofurin acidic cluster sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Pacs1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"855.46619"	"1709.92510"	"1709.92713"	"-1.19"	"-0.00102"	"8/122"	"8"	"122"	"143651.337463379"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"75.9508"	"25854"	"25854"	"25824"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.0"	""	"7.0"	""	"9.4"	""	"10.7"	""	"10.8"	"11.7"	""	"1077"	"12"	"37.000"	"30.000"	"3.47684802335162"	"13"	"0.000936"	"0.01263"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPPVSEPLDVVGR"	"[R].sEPPVSEPLDVVGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O88588"	"Phosphofurin acidic cluster sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Pacs1 PE=1 SV=1"	"O88588"	"Phosphofurin acidic cluster sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Pacs1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"855.46631"	"1709.92534"	"1709.92713"	"-1.05"	"-0.00090"	"10/122"	"10"	"122"	"164052.453491211"	"HCD"	"MS2"	"6.701562"	"8.2"	"100.000"	"76.2762"	"25985"	"25985"	"25961"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.3"	""	"7.9"	""	"13.7"	""	"15.4"	""	"17.3"	"12.8"	""	"1080"	"16"	"37.000"	"30.000"	"1.2571692791391"	"14"	"0.003111"	"0.03103"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPPVSEPLDVVGR"	"[R].sEPPVSEPLDVVGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O88588"	"Phosphofurin acidic cluster sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Pacs1 PE=1 SV=1"	"O88588"	"Phosphofurin acidic cluster sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Pacs1 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"855.46802"	"1709.92876"	"1709.92713"	"0.95"	"0.00081"	"15/122"	"15"	"122"	"191761.251159668"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"76.2868"	"25980"	"25980"	"25961"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.9"	""	"10.5"	""	"12.3"	""	"12.5"	""	"18.1"	"15.9"	""	"1076"	"35"	"37.000"	"30.000"	"0.0155877085018331"	"20"	"0"	"0.002214"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSTVAGESGSADTVR"	"[R].fSTVAGESGSADTVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.8989"	"0.0000"	"1"	"1"	"1"	"571.62598"	"1712.86338"	"1712.86526"	"-1.10"	"-0.00063"	"18/134"	"18"	"134"	"2942644.30255127"	"HCD"	"MS2"	"21.16294"	"34.2"	"100.000"	"53.5443"	"16783"	"16783"	"16764"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.0"	"2.0"	"33.4"	""	"42.1"	""	"64.5"	""	"71.3"	"67.8"	""	"900"	"89"	"36.000"	"29.000"	"6.12650107109677E-08"	"27"	"0"	"2.905E-06"	"1.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSTVAGESGSADTVR"	"[R].fSTVAGESGSADTVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"856.93542"	"1712.86357"	"1712.86526"	"-0.98"	"-0.00084"	"10/134"	"10"	"134"	"291274.079406738"	"HCD"	"MS2"	"0"	"15.8"	"100.000"	"53.6899"	"16832"	"16832"	"16801"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.1"	""	"16.1"	""	"22.5"	""	"29.2"	""	"35.8"	"31.1"	""	"904"	"64"	"36.000"	"29.000"	"1.99130798304962E-05"	"21"	"0"	"1.708E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSTVAGESGSADTVR"	"[R].fSTVAGESGSADTVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.8608"	"0.0000"	"1"	"1"	"1"	"571.62628"	"1712.86429"	"1712.86526"	"-0.56"	"-0.00032"	"18/134"	"18"	"134"	"756681.489624023"	"HCD"	"MS2"	"26.04732"	"20.7"	"100.000"	"54.0627"	"16984"	"16984"	"16960"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.9"	""	"21.4"	""	"25.0"	""	"32.0"	"4.1"	"42.8"	"41.2"	""	"900"	"79"	"36.000"	"29.000"	"5.49809847074192E-07"	"28"	"0"	"2.815E-06"	"1.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSTVAGESGSADTVR"	"[R].fSTVAGESGSADTVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.9846"	"0.0000"	"1"	"1"	"1"	"856.93579"	"1712.86431"	"1712.86526"	"-0.56"	"-0.00048"	"9/134"	"9"	"134"	"270675.937194824"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"53.7470"	"16866"	"16866"	"16844"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.7"	""	"14.7"	""	"18.6"	""	"27.0"	""	"36.3"	"25.2"	""	"900"	"65"	"36.000"	"29.000"	"1.41648674134559E-05"	"17"	"0"	"6.699E-06"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSTVAGESGSADTVR"	"[R].fSTVAGESGSADTVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.9059"	"0.0000"	"1"	"1"	"1"	"571.62646"	"1712.86484"	"1712.86526"	"-0.24"	"-0.00014"	"18/134"	"18"	"134"	"2142938.56872559"	"HCD"	"MS2"	"35.91252"	"30.1"	"100.000"	"53.7452"	"16854"	"16854"	"16833"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.8"	""	"32.9"	""	"42.7"	""	"56.6"	""	"53.2"	"63.4"	""	"899"	"85"	"36.000"	"29.000"	"1.46801230561465E-07"	"26"	"0"	"1.74E-06"	"1.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSTVAGESGSADTVR"	"[R].fSTVAGESGSADTVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"856.93610"	"1712.86492"	"1712.86526"	"-0.20"	"-0.00017"	"10/134"	"10"	"134"	"220765.849182129"	"HCD"	"MS2"	"100"	"14.7"	"100.000"	"54.0259"	"16969"	"16969"	"16944"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.2"	""	"16.5"	""	"16.3"	""	"30.1"	""	"31.7"	"28.5"	""	"908"	"18"	"36.000"	"29.000"	"0.72619934499106"	"19"	"0"	"0.0009308"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSTVAGESGSADTVR"	"[R].fSTVAGESGSADTVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"856.93640"	"1712.86553"	"1712.86526"	"0.16"	"0.00013"	"11/134"	"11"	"134"	"410325.560302734"	"HCD"	"MS2"	"0"	"22.3"	"100.000"	"53.4453"	"16743"	"16743"	"16716"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.7"	""	"21.5"	""	"28.4"	""	"41.8"	"1.4"	"41.3"	"47.1"	""	"901"	"69"	"36.000"	"29.000"	"6.20432865736722E-06"	"17"	"0"	"3.27E-07"	"1.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGGYQPSDEHK"	"[R].hGGYQPSDEHk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"571.62982"	"1712.87491"	"1712.87565"	"-0.43"	"-0.00025"	"12/96"	"12"	"96"	"929385.881286621"	"HCD"	"MS2"	"8.793955"	"45.7"	"100.000"	"21.3302"	"3710"	"3710"	"3688"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.6"	""	"62.6"	""	"50.6"	""	"75.7"	""	"83.2"	"92.2"	""	"927"	"36"	"36.000"	"29.000"	"0.0108905481246319"	"17"	"0"	"0.0001884"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDDAVVQSDMK"	"[R].fDDAVVQSDMk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"571.63513"	"1712.89084"	"1712.89294"	"-1.23"	"-0.00070"	"12/102"	"12"	"102"	"748624.391235352"	"HCD"	"MS2"	"36.93513"	"24.7"	"100.000"	"80.1484"	"27543"	"27543"	"27526"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.2"	""	"39.5"	""	"31.3"	""	"30.4"	""	"44.6"	"47.5"	""	"953"	"41"	"36.000"	"29.000"	"0.00403703862837994"	"23"	"0"	"0.00234"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEAQLTPQVVER"	"[K].tLEAQLTPQVVER.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"856.98993"	"1712.97258"	"1712.97442"	"-1.07"	"-0.00092"	"6/134"	"6"	"134"	"81109.5139160156"	"HCD"	"MS2"	"22.27779"	"5.8"	"100.000"	"77.8845"	"26636"	"26636"	"26619"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.2"	""	"7.9"	""	"7.0"	""	"11.2"	""	"10.5"	"9.8"	""	"883"	"31"	"36.000"	"29.000"	"0.0382763668147252"	"15"	"0.0002479"	"0.005047"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEAQLTPQVVER"	"[K].tLEAQLTPQVVER.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"856.98993"	"1712.97258"	"1712.97442"	"-1.07"	"-0.00092"	"5/134"	"5"	"134"	"108090.982055664"	"HCD"	"MS2"	"14.04285"	"6.6"	"100.000"	"77.9617"	"26658"	"26658"	"26641"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.0"	""	"7.5"	""	"6.1"	""	"12.3"	""	"13.3"	"12.6"	""	"883"	"25"	"36.000"	"29.000"	"0.1308973058475"	"14"	"0.001374"	"0.01664"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEAQLTPQVVER"	"[K].tLEAQLTPQVVER.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"0"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"571.66266"	"1712.97342"	"1712.97442"	"-0.58"	"-0.00033"	"11/134"	"11"	"134"	"540401.00958252"	"HCD"	"MS2"	"36.87457"	"10.1"	"100.000"	"77.9056"	"26644"	"26644"	"26625"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.3"	""	"11.2"	""	"16.3"	""	"19.8"	""	"16.8"	"16.9"	""	"879"	"43"	"36.000"	"29.000"	"0.0020939141870098"	"21"	"0"	"3.356E-05"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEAQLTPQVVER"	"[K].tLEAQLTPQVVER.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"856.99060"	"1712.97392"	"1712.97442"	"-0.29"	"-0.00025"	"6/134"	"6"	"134"	"63480.9788818359"	"HCD"	"MS2"	"19.52159"	"3.1"	"100.000"	"78.1938"	"26759"	"26759"	"26739"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.3"	""	"1.9"	""	"4.2"	""	"3.1"	""	"7.0"	"7.4"	""	"873"	"6"	"36.000"	"29.000"	"9.99963730433133"	"13"	"0.007339"	"0.08438"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEAQLTPQVVER"	"[K].tLEAQLTPQVVER.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"571.66284"	"1712.97397"	"1712.97442"	"-0.26"	"-0.00015"	"10/134"	"10"	"134"	"559964.664855957"	"HCD"	"MS2"	"19.14248"	"9.7"	"100.000"	"77.9571"	"26656"	"26656"	"26641"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.9"	""	"11.1"	""	"15.5"	""	"15.0"	""	"18.7"	"19.3"	""	"873"	"38"	"36.000"	"29.000"	"0.00645630811435423"	"18"	"0"	"7.757E-05"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSmR.[D]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.94818"	"1713.82999"	"1713.83152"	"-0.89"	"-0.00051"	"13/126"	"13"	"126"	"1833787.06445313"	"HCD"	"MS2"	"12.85708"	"37.9"	"100.000"	"51.5735"	"15967"	"15967"	"15947"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.4"	""	"54.1"	""	"48.3"	""	"73.3"	"0.5"	"72.6"	"63.5"	""	"598"	"45"	"34.000"	"27.000"	"0.00103674318285307"	"15"	"0"	"0.0002991"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSmR.[D]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.94818"	"1713.82999"	"1713.83152"	"-0.89"	"-0.00051"	"13/126"	"13"	"126"	"1853087.40283203"	"HCD"	"MS2"	"15.33676"	"36.9"	"100.000"	"51.2270"	"15837"	"15837"	"15815"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.9"	""	"51.3"	""	"40.7"	""	"73.6"	""	"72.2"	"61.5"	""	"598"	"43"	"34.000"	"27.000"	"0.00166982588226312"	"15"	"0"	"0.0001158"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSmR.[D]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"857.41864"	"1713.83000"	"1713.83152"	"-0.88"	"-0.00076"	"9/126"	"9"	"126"	"638167.094665527"	"HCD"	"MS2"	"0"	"26.7"	"100.000"	"51.3076"	"15870"	"15870"	"15847"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.3"	""	"31.6"	""	"37.2"	""	"50.3"	""	"42.9"	"48.4"	""	"598"	"33"	"34.000"	"27.000"	"0.0145435754501747"	"18"	"0"	"0.00259"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSmR.[D]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"857.41882"	"1713.83037"	"1713.83152"	"-0.67"	"-0.00057"	"6/126"	"6"	"126"	"289427.902099609"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"51.4372"	"15912"	"15912"	"15883"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.0"	""	"19.7"	""	"14.0"	""	"20.2"	""	"19.9"	"26.3"	""	"607"	"35"	"34.000"	"27.000"	"0.0102131261305461"	"17"	"0"	"0.0003714"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSmR.[D]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"857.41937"	"1713.83147"	"1713.83152"	"-0.03"	"-0.00002"	"5/126"	"5"	"126"	"474414.723815918"	"HCD"	"MS2"	"0"	"20.0"	"100.000"	"51.7367"	"16034"	"16034"	"16011"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.0"	""	"24.3"	""	"28.6"	""	"41.2"	""	"30.4"	"31.7"	""	"619"	"30"	"34.000"	"27.000"	"0.0313805573885502"	"19"	"0"	"0.001673"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSmR.[D]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"857.41980"	"1713.83232"	"1713.83152"	"0.47"	"0.00040"	"5/126"	"5"	"126"	"123469.252868652"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"50.9828"	"15738"	"15738"	"15712"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.4"	""	"7.6"	""	"7.6"	""	"10.6"	""	"11.5"	"10.6"	""	"620"	"21"	"34.000"	"27.000"	"0.242304619422382"	"14"	"0.0004639"	"0.008012"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NDAPTPGTSTTPGLR"	"[R].nDAPTPGTSTTPGLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JIT3"	"Transducin-like enhancer protein 3 OS=Rattus norvegicus OX=10116 GN=Tle3 PE=1 SV=1"	"Q9JIT3"	"Transducin-like enhancer protein 3 OS=Rattus norvegicus OX=10116 GN=Tle3 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0476"	"3"	"3"	"3"	"857.45142"	"1713.89556"	"1713.89689"	"-0.78"	"-0.00067"	"4/158"	"4"	"158"	"124240.725524902"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"43.1992"	"12574"	"12574"	"12546"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.5"	""	"4.6"	""	"8.4"	""	"11.0"	""	"12.5"	"9.8"	""	"1013"	"20"	"37.000"	"30.000"	"0.452459227510914"	"25"	"0.0003538"	"0.006623"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYETATLSDIK"	"[R].dYETATLSDIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"571.98145"	"1713.92978"	"1713.93110"	"-0.77"	"-0.00044"	"8/96"	"8"	"96"	"2685265.60180664"	"HCD"	"MS2"	"31.77481"	"76.2"	"100.000"	"80.3418"	"27618"	"27618"	"27597"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"112.8"	""	"87.7"	""	"79.7"	""	"119.5"	"3.1"	"162.8"	"158.0"	""	"1084"	"39"	"37.000"	"30.000"	"0.006165939889163"	"24"	"0"	"0.0004553"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYETATLSDIK"	"[R].dYETATLSDIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"571.98175"	"1713.93070"	"1713.93110"	"-0.24"	"-0.00013"	"11/96"	"11"	"96"	"1769378.15234375"	"HCD"	"MS2"	"21.89822"	"53.3"	"100.000"	"80.3101"	"27608"	"27608"	"27594"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"72.9"	""	"63.8"	""	"60.8"	""	"93.4"	""	"111.7"	"106.7"	""	"1101"	"24"	"37.000"	"30.000"	"0.232143925137435"	"17"	"0"	"0.002415"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYETATLSDIK"	"[R].dYETATLSDIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"857.46924"	"1713.93120"	"1713.93110"	"0.06"	"0.00005"	"14/96"	"14"	"96"	"368261.945495605"	"HCD"	"MS2"	"0"	"39.2"	"100.000"	"80.3006"	"27601"	"27601"	"27581"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.6"	""	"42.1"	""	"48.4"	""	"62.1"	""	"81.1"	"80.0"	""	"1082"	"28"	"37.000"	"30.000"	"0.0837909790831652"	"20"	"0"	"0.002003"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYETATLSDIK"	"[R].dYETATLSDIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"857.46936"	"1713.93144"	"1713.93110"	"0.20"	"0.00017"	"15/96"	"15"	"96"	"453300.608642578"	"HCD"	"MS2"	"38.18175"	"42.3"	"100.000"	"80.3424"	"27621"	"27621"	"27603"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.5"	""	"49.5"	""	"49.7"	""	"52.9"	"0.4"	"88.6"	"91.8"	""	"1080"	"41"	"37.000"	"30.000"	"0.00446060492771677"	"20"	"0"	"0.0001229"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLQAETEPIVK"	"[K].qLQAETEPIVk.[M]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"857.50958"	"1714.01189"	"1714.01511"	"-1.88"	"-0.00161"	"9/104"	"9"	"104"	"133370.227844238"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"66.9765"	"22211"	"22211"	"22188"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.5"	""	"13.0"	""	"14.1"	""	"21.4"	""	"21.4"	"17.9"	""	"669"	"31"	"35.000"	"28.000"	"0.0246261274111989"	"23"	"0.0003538"	"0.006306"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLQAETEPIVK"	"[K].qLQAETEPIVk.[M]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"857.51038"	"1714.01348"	"1714.01511"	"-0.95"	"-0.00082"	"7/104"	"7"	"104"	"129537.337646484"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"67.1556"	"22269"	"22269"	"22242"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.2"	""	"8.4"	""	"12.1"	""	"22.0"	""	"23.3"	"20.0"	""	"670"	"11"	"35.000"	"28.000"	"2.97882374482413"	"13"	"0.008641"	"0.1073"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYTEMNDLQK"	"[R].dYTEMNDLQk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"857.94000"	"1714.87273"	"1714.87221"	"0.30"	"0.00026"	"8/92"	"8"	"92"	"322104.069213867"	"HCD"	"MS2"	"0"	"35.2"	"100.000"	"68.4125"	"22781"	"22781"	"22757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"88.8"	""	"41.3"	""	"53.9"	""	"54.1"	""	"46.0"	"48.8"	""	"863"	"43"	"36.000"	"29.000"	"0.00226454419097777"	"20"	"0"	"0.0007321"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYTEMNDLQK"	"[R].dYTEMNDLQk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"857.94000"	"1714.87273"	"1714.87221"	"0.30"	"0.00026"	"9/92"	"9"	"92"	"378948.884033203"	"HCD"	"MS2"	"0"	"41.3"	"100.000"	"68.2820"	"22742"	"22742"	"22719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"106.7"	""	"51.0"	""	"52.4"	""	"65.2"	""	"58.3"	"57.5"	""	"863"	"57"	"36.000"	"29.000"	"9.11970520689513E-05"	"24"	"0"	"0.0001254"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHGGALGPEEFK"	"[K].dHGGALGPEEFk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"572.30945"	"1714.91379"	"1714.91646"	"-1.55"	"-0.00089"	"11/106"	"11"	"106"	"698499.630859375"	"HCD"	"MS2"	"0"	"25.6"	"100.000"	"54.1036"	"17012"	"17012"	"16987"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.5"	""	"27.5"	""	"31.9"	""	"41.4"	""	"55.1"	"56.3"	""	"980"	"22"	"36.000"	"29.000"	"0.289865200745982"	"19"	"0"	"0.0003721"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHGGALGPEEFK"	"[K].dHGGALGPEEFk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"572.30957"	"1714.91416"	"1714.91646"	"-1.34"	"-0.00077"	"12/106"	"12"	"106"	"1068863.01135254"	"HCD"	"MS2"	"8.302485"	"31.7"	"100.000"	"54.2584"	"17064"	"17064"	"17040"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.1"	""	"27.9"	""	"33.7"	""	"49.7"	""	"86.3"	"74.6"	""	"980"	"44"	"36.000"	"29.000"	"0.00176683535080605"	"21"	"0"	"2.696E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSDDLPLNVSR"	"[K].gVVDSDDLPLNVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"572.31024"	"1714.91617"	"1714.91729"	"-0.65"	"-0.00037"	"16/128"	"16"	"128"	"1663766.75262451"	"HCD"	"MS2"	"14.45898"	"18.7"	"100.000"	"82.6970"	"28567"	"28567"	"28549"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.2"	""	"23.7"	""	"23.6"	""	"27.8"	"1.1"	"30.3"	"42.2"	""	"967"	"39"	"36.000"	"29.000"	"0.0064031913226662"	"24"	"0"	"2.06E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSDDLPLNVSR"	"[K].gVVDSDDLPLNVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"857.96179"	"1714.91631"	"1714.91729"	"-0.58"	"-0.00049"	"5/128"	"5"	"128"	"160924.924133301"	"HCD"	"MS2"	"20.84384"	"9.2"	"100.000"	"82.5092"	"28489"	"28489"	"28476"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.4"	""	"14.2"	""	"10.0"	""	"14.6"	""	"14.2"	"16.0"	""	"967"	"24"	"36.000"	"29.000"	"0.202953468759652"	"14"	"0"	"0.00344"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSDDLPLNVSR"	"[K].gVVDSDDLPLNVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"857.96204"	"1714.91680"	"1714.91729"	"-0.29"	"-0.00025"	"10/128"	"10"	"128"	"167177.261901855"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"82.5469"	"28507"	"28507"	"28495"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.5"	""	"9.0"	""	"8.9"	""	"12.0"	""	"17.0"	"14.7"	""	"973"	"40"	"36.000"	"29.000"	"0.00496687058823786"	"16"	"0"	"0.0007639"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSDDLPLNVSR"	"[K].gVVDSDDLPLNVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9828"	"0.0000"	"1"	"1"	"1"	"857.96204"	"1714.91680"	"1714.91729"	"-0.29"	"-0.00025"	"12/128"	"12"	"128"	"540973.552246094"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"83.0926"	"28722"	"28722"	"28713"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.3"	""	"25.4"	""	"34.4"	""	"39.3"	""	"44.7"	"45.8"	""	"973"	"58"	"36.000"	"29.000"	"8.59177399763818E-05"	"17"	"0"	"5.252E-06"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSDDLPLNVSR"	"[K].gVVDSDDLPLNVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9595"	"0.0000"	"1"	"1"	"1"	"857.96204"	"1714.91680"	"1714.91729"	"-0.29"	"-0.00025"	"12/128"	"12"	"128"	"2850223.91888428"	"HCD"	"MS2"	"0"	"119.3"	"100.000"	"82.8151"	"28614"	"28614"	"28606"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"219.1"	""	"150.0"	""	"172.0"	""	"190.3"	""	"207.7"	"189.7"	""	"973"	"74"	"36.000"	"29.000"	"1.87535221004398E-06"	"20"	"0"	"1.009E-07"	"1.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSDDLPLNVSR"	"[K].gVVDSDDLPLNVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"857.96210"	"1714.91692"	"1714.91729"	"-0.22"	"-0.00019"	"18/128"	"18"	"128"	"518682.435913086"	"HCD"	"MS2"	"0"	"26.1"	"100.000"	"83.0778"	"28714"	"28714"	"28705"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.4"	""	"29.0"	""	"34.8"	""	"42.4"	""	"51.9"	"47.2"	""	"986"	"52"	"36.000"	"29.000"	"0.000288301511483229"	"16"	"0"	"2.424E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSDDLPLNVSR"	"[K].gVVDSDDLPLNVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"572.31055"	"1714.91709"	"1714.91729"	"-0.12"	"-0.00007"	"15/128"	"15"	"128"	"878799.585449219"	"HCD"	"MS2"	"14.81367"	"12.3"	"100.000"	"82.6319"	"28539"	"28539"	"28522"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.5"	""	"15.2"	""	"13.1"	""	"21.3"	""	"19.7"	"29.8"	""	"986"	"52"	"36.000"	"29.000"	"0.000315389273892946"	"26"	"0"	"1.356E-05"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSDDLPLNVSR"	"[K].gVVDSDDLPLNVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"857.96252"	"1714.91777"	"1714.91729"	"0.28"	"0.00024"	"11/128"	"11"	"128"	"3086310.3527832"	"HCD"	"MS2"	"0"	"130.6"	"100.000"	"82.7981"	"28606"	"28606"	"28590"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"241.0"	""	"159.4"	""	"189.5"	""	"204.7"	""	"223.6"	"217.4"	""	"976"	"70"	"36.000"	"29.000"	"5.14540805438934E-06"	"22"	"0"	"4.943E-09"	"1.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEPEILELESK"	"[K].aEPEILELESk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"572.66516"	"1715.98093"	"1715.98314"	"-1.29"	"-0.00074"	"10/96"	"10"	"96"	"497997.673217773"	"HCD"	"MS2"	"51.22014"	"14.3"	"100.000"	"94.1637"	"32995"	"32995"	"32989"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.8"	""	"13.0"	""	"17.1"	""	"35.2"	""	"34.1"	"27.5"	""	"895"	"30"	"36.000"	"29.000"	"0.043032149457669"	"23"	"0"	"0.0001988"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEPEILELESK"	"[K].aEPEILELESk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"572.66571"	"1715.98258"	"1715.98314"	"-0.33"	"-0.00019"	"10/96"	"10"	"96"	"605367.200073242"	"HCD"	"MS2"	"4.37242"	"16.2"	"100.000"	"94.1501"	"33008"	"33008"	"32999"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.6"	""	"14.0"	""	"20.5"	""	"32.4"	""	"36.5"	"32.9"	""	"922"	"36"	"36.000"	"29.000"	"0.0129033038835144"	"24"	"0"	"0.0001694"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEPEILELESK"	"[K].aEPEILELESk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"858.49512"	"1715.98296"	"1715.98314"	"-0.11"	"-0.00009"	"12/96"	"12"	"96"	"108135.067382813"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"94.1153"	"32979"	"32979"	"32969"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.2"	""	"7.8"	""	"8.4"	""	"17.6"	""	"18.8"	"13.4"	""	"921"	"47"	"36.000"	"29.000"	"0.000910394519271512"	"24"	"0"	"0.003494"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEPEILELESK"	"[K].aEPEILELESk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"858.49567"	"1715.98406"	"1715.98314"	"0.54"	"0.00046"	"12/96"	"12"	"96"	"134257.899108887"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"94.1152"	"32995"	"32995"	"32987"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.1"	""	"6.0"	""	"6.2"	""	"22.9"	""	"25.8"	"19.4"	""	"878"	"45"	"36.000"	"29.000"	"0.00135040650167117"	"19"	"0"	"0.0004369"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"858.93427"	"1716.86125"	"1716.86420"	"-1.71"	"-0.00147"	"17/118"	"17"	"118"	"335835.654052734"	"HCD"	"MS2"	"21.05094"	"21.1"	"100.000"	"69.1963"	"23101"	"23101"	"23075"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.9"	""	"23.6"	""	"32.8"	""	"29.8"	""	"39.4"	"38.8"	""	"725"	"66"	"35.000"	"28.000"	"1.0169696937575E-05"	"18"	"0"	"1.163E-05"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"572.95886"	"1716.86203"	"1716.86420"	"-1.26"	"-0.00072"	"13/118"	"13"	"118"	"1367866.19213867"	"HCD"	"MS2"	"21.75402"	"25.9"	"100.000"	"69.7249"	"23330"	"23330"	"23310"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.2"	""	"24.7"	""	"32.8"	""	"42.8"	"0.0"	"47.7"	"57.7"	""	"730"	"36"	"35.000"	"28.000"	"0.00993785977448438"	"23"	"0"	"0.002051"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"858.93469"	"1716.86211"	"1716.86420"	"-1.22"	"-0.00104"	"7/118"	"7"	"118"	"144781.118225098"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"70.1090"	"23473"	"23473"	"23445"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.5"	""	"13.1"	""	"16.0"	""	"13.4"	""	"18.4"	"16.3"	""	"730"	"19"	"35.000"	"28.000"	"0.444931203607576"	"18"	"0.003111"	"0.0312"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"858.93469"	"1716.86211"	"1716.86420"	"-1.22"	"-0.00104"	"12/118"	"12"	"118"	"810645.910888672"	"HCD"	"MS2"	"0"	"40.0"	"100.000"	"69.6831"	"23313"	"23313"	"23294"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.1"	""	"44.8"	""	"43.3"	""	"68.9"	"0.9"	"76.4"	"79.6"	""	"730"	"80"	"35.000"	"28.000"	"3.56691585648871E-07"	"25"	"0"	"7.822E-06"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"858.93500"	"1716.86272"	"1716.86420"	"-0.86"	"-0.00074"	"12/118"	"12"	"118"	"581201.053283691"	"HCD"	"MS2"	"0"	"31.1"	"100.000"	"69.0589"	"23059"	"23059"	"23038"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.1"	""	"42.2"	""	"36.5"	""	"52.0"	""	"50.0"	"60.8"	""	"760"	"68"	"35.000"	"28.000"	"6.23424113815826E-06"	"23"	"0"	"2.589E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"572.95917"	"1716.86295"	"1716.86420"	"-0.73"	"-0.00042"	"15/118"	"15"	"118"	"3860070.23986816"	"HCD"	"MS2"	"11.33891"	"27.3"	"100.000"	"69.1372"	"23091"	"23091"	"23070"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.5"	""	"32.1"	""	"33.1"	""	"50.9"	""	"49.6"	"54.0"	""	"753"	"58"	"35.000"	"28.000"	"5.67237560419309E-05"	"24"	"0"	"0.0001988"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9275"	"0.0000"	"1"	"1"	"1"	"858.93549"	"1716.86370"	"1716.86420"	"-0.29"	"-0.00025"	"11/118"	"11"	"118"	"11238981.8132935"	"HCD"	"MS2"	"0"	"155.7"	"64.537"	"69.3469"	"23177"	"23177"	"23161"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"263.8"	""	"168.6"	""	"197.2"	""	"243.8"	"1.6"	"297.5"	"303.7"	""	"760"	"69"	"35.000"	"28.000"	"4.65354155720718E-06"	"21"	"0"	"1.3E-06"	"1.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.5862"	"0.0000"	"1"	"1"	"1"	"572.95947"	"1716.86386"	"1716.86420"	"-0.19"	"-0.00011"	"13/118"	"13"	"118"	"1537157.75024414"	"HCD"	"MS2"	"23.27637"	"30.0"	"100.000"	"69.8623"	"23372"	"23372"	"23355"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.6"	""	"38.3"	""	"34.0"	""	"51.4"	"1.3"	"50.8"	"60.2"	""	"760"	"29"	"35.000"	"28.000"	"0.0429322447575663"	"26"	"0"	"0.001397"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9595"	"0.0000"	"1"	"1"	"1"	"858.93567"	"1716.86406"	"1716.86420"	"-0.08"	"-0.00007"	"11/118"	"11"	"118"	"10763038.4504395"	"HCD"	"MS2"	"0"	"156.1"	"70.034"	"69.4869"	"23220"	"23220"	"23203"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"260.7"	""	"165.8"	""	"195.5"	""	"239.0"	"2.1"	"306.4"	"311.8"	""	"759"	"74"	"35.000"	"28.000"	"1.51429950446433E-06"	"20"	"0"	"9.323E-07"	"1.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"858.93579"	"1716.86431"	"1716.86420"	"0.06"	"0.00005"	"12/118"	"12"	"118"	"1395569.02410889"	"HCD"	"MS2"	"0"	"65.2"	"100.000"	"69.7818"	"23340"	"23340"	"23323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"118.1"	""	"78.9"	""	"80.1"	""	"90.9"	"1.2"	"128.6"	"119.9"	""	"756"	"62"	"35.000"	"28.000"	"2.39051679820211E-05"	"20"	"0"	"1.397E-05"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"572.95972"	"1716.86460"	"1716.86420"	"0.23"	"0.00013"	"14/118"	"14"	"118"	"15201758.6538086"	"HCD"	"MS2"	"3.649379"	"32.5"	"46.492"	"69.5652"	"23252"	"23252"	"23235"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.3"	""	"38.9"	""	"41.2"	""	"47.2"	""	"60.5"	"65.4"	""	"768"	"50"	"35.000"	"28.000"	"0.000382235680262986"	"19"	"0"	"0.0003774"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.8545"	"0.0000"	"1"	"1"	"1"	"572.95978"	"1716.86478"	"1716.86420"	"0.34"	"0.00019"	"15/118"	"15"	"118"	"2985096.88751221"	"HCD"	"MS2"	"14.93723"	"27.7"	"100.000"	"69.2724"	"23132"	"23132"	"23107"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.6"	""	"33.9"	""	"35.8"	""	"47.6"	""	"47.8"	"55.9"	""	"772"	"55"	"35.000"	"28.000"	"0.000135078834472946"	"24"	"0"	"0.0002747"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.8387"	"0.0000"	"1"	"1"	"1"	"572.95978"	"1716.86478"	"1716.86420"	"0.34"	"0.00019"	"16/118"	"16"	"118"	"14944867.0401611"	"HCD"	"MS2"	"4.107415"	"33.7"	"42.851"	"69.4252"	"23209"	"23209"	"23192"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.6"	""	"39.4"	""	"43.8"	""	"59.4"	"1.7"	"60.4"	"62.2"	""	"772"	"62"	"35.000"	"28.000"	"2.65208417845494E-05"	"26"	"0"	"6.537E-05"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGGEAPEDLLEK"	"[R].tGGEAPEDLLEk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"572.98511"	"1716.94077"	"1716.94200"	"-0.72"	"-0.00041"	"8/108"	"8"	"108"	"529969.215454102"	"HCD"	"MS2"	"17.73056"	"19.1"	"100.000"	"78.9903"	"27077"	"27077"	"27057"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.6"	""	"22.8"	""	"28.1"	""	"32.6"	""	"30.3"	"38.2"	""	"1036"	"30"	"37.000"	"30.000"	"0.0484540139208432"	"22"	"0.001886"	"0.0211"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGGEAPEDLLEK"	"[R].tGGEAPEDLLEk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"572.98523"	"1716.94114"	"1716.94200"	"-0.50"	"-0.00029"	"9/108"	"9"	"108"	"719213.681335449"	"HCD"	"MS2"	"29.09268"	"24.6"	"100.000"	"79.0318"	"27090"	"27090"	"27068"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.1"	""	"29.7"	""	"33.2"	""	"35.9"	""	"48.5"	"53.9"	""	"1028"	"24"	"37.000"	"30.000"	"0.182794497744459"	"22"	"0.004942"	"0.0531"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGGEAPEDLLEK"	"[R].tGGEAPEDLLEk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"572.98529"	"1716.94132"	"1716.94200"	"-0.40"	"-0.00023"	"8/108"	"8"	"108"	"721561.768615723"	"HCD"	"MS2"	"29.49083"	"25.3"	"100.000"	"79.2970"	"27201"	"27201"	"27182"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.2"	""	"29.0"	""	"43.0"	""	"37.8"	""	"49.6"	"49.9"	""	"1043"	"16"	"37.000"	"30.000"	"1.30994877403225"	"16"	"0.002871"	"0.02708"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGGEAPEDLLEK"	"[R].tGGEAPEDLLEk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"858.97473"	"1716.94219"	"1716.94200"	"0.11"	"0.00009"	"6/108"	"6"	"108"	"92552.6074829102"	"HCD"	"MS2"	"25.0144"	"7.6"	"100.000"	"79.4232"	"27248"	"27248"	"27225"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.1"	""	"6.9"	""	"8.7"	""	"13.9"	""	"17.7"	"13.6"	""	"1033"	"17"	"37.000"	"30.000"	"0.95734908349375"	"16"	"0.004942"	"0.05519"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFDTNSDGTIDFR"	"[R].tFDTNSDGTIDFR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P62749"	"Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"P84076; P62749"	"Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2; Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"859.41504"	"1717.82280"	"1717.82306"	"-0.15"	"-0.00013"	"6/132"	"6"	"132"	"362586.45880127"	"HCD"	"MS2"	"24.69667"	"26.6"	"100.000"	"79.0919"	"27118"	"27118"	"27097"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.8"	""	"29.5"	""	"29.8"	""	"47.4"	""	"61.2"	"53.1"	""	"528"	"8"	"34.000"	"27.000"	"4.02349927002485"	"16"	"0.001886"	"0.02165"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFDTNSDGTIDFR"	"[R].tFDTNSDGTIDFR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P62749"	"Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"P84076; P62749"	"Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2; Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"859.41541"	"1717.82353"	"1717.82306"	"0.28"	"0.00024"	"6/132"	"6"	"132"	"419698.184143066"	"HCD"	"MS2"	"34.0033"	"31.6"	"100.000"	"79.0826"	"27110"	"27110"	"27096"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.5"	""	"36.2"	""	"40.6"	""	"51.2"	""	"63.8"	"65.7"	""	"528"	"20"	"34.000"	"27.000"	"0.242439805471665"	"14"	"0"	"0.00274"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQGYIFGDYIER"	"[K].eQGYIFGDYIER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"859.93243"	"1718.85759"	"1718.85872"	"-0.65"	"-0.00056"	"7/128"	"7"	"128"	"154613.85559082"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"93.8243"	"32873"	"32873"	"32868"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.7"	""	"17.8"	""	"10.3"	""	"14.8"	""	"16.8"	"14.9"	""	"796"	"32"	"35.000"	"29.000"	"0.0233282989476583"	"18"	"0"	"0.002687"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQGYIFGDYIER"	"[K].eQGYIFGDYIER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"859.93243"	"1718.85759"	"1718.85872"	"-0.65"	"-0.00056"	"6/128"	"6"	"128"	"167955.56829834"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"93.8209"	"32890"	"32890"	"32884"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.4"	""	"14.2"	""	"12.3"	""	"19.0"	""	"18.5"	"18.5"	""	"796"	"16"	"35.000"	"29.000"	"0.941636039599331"	"17"	"0.000936"	"0.01124"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSSPTDNLELSAR"	"[K].sLSSPTDNLELSAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z272"	"ARF GTPase-activating protein GIT1 OS=Rattus norvegicus OX=10116 GN=Git1 PE=1 SV=1"	"Q9Z272"	"ARF GTPase-activating protein GIT1 OS=Rattus norvegicus OX=10116 GN=Git1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"859.95819"	"1718.90911"	"1718.91221"	"-1.81"	"-0.00155"	"7/138"	"7"	"138"	"165008.29876709"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"71.1211"	"23900"	"23900"	"23873"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.3"	""	"10.9"	""	"13.3"	""	"19.4"	""	"20.1"	"22.3"	""	"1037"	"30"	"37.000"	"30.000"	"0.05137463634269"	"15"	"0.0001301"	"0.003868"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSSPTDNLELSAR"	"[K].sLSSPTDNLELSAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z272"	"ARF GTPase-activating protein GIT1 OS=Rattus norvegicus OX=10116 GN=Git1 PE=1 SV=1"	"Q9Z272"	"ARF GTPase-activating protein GIT1 OS=Rattus norvegicus OX=10116 GN=Git1 PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"859.95923"	"1718.91118"	"1718.91221"	"-0.60"	"-0.00051"	"14/138"	"14"	"138"	"190768.200195313"	"HCD"	"MS2"	"0"	"11.7"	"100.000"	"71.2334"	"23932"	"23932"	"23907"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.5"	""	"17.8"	""	"14.2"	""	"22.7"	"1.6"	"18.3"	"21.5"	""	"1042"	"42"	"37.000"	"30.000"	"0.00302578261528604"	"24"	"0"	"0.0007042"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INPDEREEMK"	"[K].iNPDEREEMk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48508"	"Glutamate--cysteine ligase regulatory subunit OS=Rattus norvegicus OX=10116 GN=Gclm PE=1 SV=1"	"P48508"	"Glutamate--cysteine ligase regulatory subunit OS=Rattus norvegicus OX=10116 GN=Gclm PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"573.64282"	"1718.91391"	"1718.91474"	"-0.48"	"-0.00028"	"7/96"	"7"	"96"	"2241514.95928955"	"HCD"	"MS2"	"6.838559"	"107.9"	"100.000"	"42.7925"	"12397"	"12397"	"12370"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"213.9"	""	"137.2"	""	"142.9"	""	"142.4"	""	"191.1"	"200.4"	""	"1051"	"14"	"37.000"	"30.000"	"2.20076018469466"	"13"	"0.002379"	"0.02466"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INPDEREEMK"	"[K].iNPDEREEMk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48508"	"Glutamate--cysteine ligase regulatory subunit OS=Rattus norvegicus OX=10116 GN=Gclm PE=1 SV=1"	"P48508"	"Glutamate--cysteine ligase regulatory subunit OS=Rattus norvegicus OX=10116 GN=Gclm PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"573.64301"	"1718.91446"	"1718.91474"	"-0.16"	"-0.00009"	"6/96"	"6"	"96"	"2704381.09277344"	"HCD"	"MS2"	"15.58059"	"129.9"	"100.000"	"42.6542"	"12351"	"12351"	"12330"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"273.3"	""	"157.4"	""	"172.9"	""	"163.3"	""	"227.6"	"235.4"	""	"1062"	"9"	"37.000"	"30.000"	"7.09732219286161"	"13"	"0.004942"	"0.05539"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVSPSPETETAK"	"[K].dVSPSPETETAk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.9153"	"0.0000"	"1"	"1"	"1"	"859.96332"	"1718.91936"	"1718.92127"	"-1.11"	"-0.00095"	"17/106"	"17"	"106"	"556539.259521484"	"HCD"	"MS2"	"0"	"41.4"	"100.000"	"43.5456"	"12715"	"12715"	"12692"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.3"	""	"30.1"	""	"38.0"	""	"115.3"	"0.4"	"101.5"	"78.5"	""	"1072"	"59"	"37.000"	"30.000"	"6.26851673586651E-05"	"21"	"0"	"2.592E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVSPSPETETAK"	"[K].dVSPSPETETAk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"859.96448"	"1718.92168"	"1718.92127"	"0.24"	"0.00021"	"11/106"	"11"	"106"	"532339.096679688"	"HCD"	"MS2"	"0"	"39.9"	"100.000"	"43.6817"	"12760"	"12760"	"12734"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.6"	""	"31.4"	""	"29.5"	""	"101.2"	"1.4"	"106.7"	"81.9"	""	"1078"	"68"	"37.000"	"30.000"	"8.76170779349511E-06"	"21"	"0"	"2.457E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSIGTENTEENR"	"[R].lQSIGTENTEENR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"860.43799"	"1719.86870"	"1719.87107"	"-1.38"	"-0.00119"	"7/134"	"7"	"134"	"145597.767028809"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"46.2163"	"13785"	"13785"	"13757"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.5"	""	"6.5"	""	"10.1"	""	"18.8"	""	"14.7"	"21.6"	""	"816"	"35"	"36.000"	"29.000"	"0.0142449248715263"	"23"	"0"	"0.0003749"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSIGTENTEENR"	"[R].lQSIGTENTEENR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"860.43823"	"1719.86919"	"1719.87107"	"-1.10"	"-0.00094"	"15/134"	"15"	"134"	"194518.824707031"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"46.0667"	"13736"	"13736"	"13705"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.8"	""	"12.6"	""	"12.7"	""	"16.7"	""	"18.9"	"24.5"	""	"813"	"39"	"36.000"	"29.000"	"0.00539585847067138"	"26"	"0"	"0.0001715"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWQELDDAEK"	"[K].eWQELDDAEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"3"	"3"	"0.4483"	"0.0000"	"1"	"1"	"1"	"574.29761"	"1720.87827"	"1720.87940"	"-0.66"	"-0.00038"	"12/102"	"12"	"102"	"731964.122314453"	"HCD"	"MS2"	"22.09293"	"27.6"	"100.000"	"76.1933"	"25951"	"25951"	"25935"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.1"	""	"26.6"	""	"28.8"	""	"39.6"	"1.5"	"51.2"	"58.5"	""	"894"	"29"	"36.000"	"29.000"	"0.0506182962366294"	""	"0.0001301"	"0.004949"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWQELDDAEK"	"[K].eWQELDDAEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"574.29773"	"1720.87864"	"1720.87940"	"-0.45"	"-0.00026"	"9/102"	"9"	"102"	"503289.922790527"	"HCD"	"MS2"	"10.13578"	"19.0"	"100.000"	"76.3234"	"25995"	"25995"	"25976"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.3"	""	"23.4"	""	"23.0"	""	"26.7"	"0.8"	"37.4"	"37.9"	""	"900"	"16"	"36.000"	"29.000"	"1.19732627690946"	"24"	"0.0023"	"0.02388"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWQELDDAEK"	"[K].eWQELDDAEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"860.94348"	"1720.87969"	"1720.87940"	"0.17"	"0.00014"	"11/102"	"11"	"102"	"134152.213378906"	"HCD"	"MS2"	"0"	"13.3"	"100.000"	"76.1987"	"25945"	"25945"	"25919"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.6"	""	"11.4"	""	"12.6"	""	"26.3"	""	"22.4"	"24.9"	""	"900"	"26"	"36.000"	"29.000"	"0.123087092683802"	""	"0.0003538"	"0.007033"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQEEMEALVK"	"[K].gIQEEmEALVk.[D]"	"N-Term(TMT6plex); M6(Oxidation); K11(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"860.98102"	"1720.95476"	"1720.95554"	"-0.46"	"-0.00039"	"9/102"	"9"	"102"	"322902.311279297"	"HCD"	"MS2"	"10.99681"	"23.9"	"100.000"	"68.6281"	"22883"	"22883"	"22863"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.7"	""	"20.8"	""	"15.8"	""	"72.2"	"0.3"	"43.0"	"47.3"	""	"1119"	"56"	"37.000"	"30.000"	"0.000138611764124582"	"24"	"0"	"0.0005315"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQEEMEALVK"	"[K].gIQEEmEALVk.[D]"	"N-Term(TMT6plex); M6(Oxidation); K11(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"860.98108"	"1720.95488"	"1720.95554"	"-0.38"	"-0.00033"	"10/102"	"10"	"102"	"311736.910461426"	"HCD"	"MS2"	"20.33035"	"22.7"	"100.000"	"68.7607"	"22923"	"22923"	"22901"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.8"	""	"18.2"	""	"23.6"	""	"65.2"	"0.7"	"45.0"	"40.5"	""	"1121"	"54"	"37.000"	"30.000"	"0.000216060619471665"	"23"	"0"	"0.001552"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLIDEANQDFTNR"	"[K].gLIDEANQDFTNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"861.43573"	"1721.86418"	"1721.86559"	"-0.82"	"-0.00070"	"6/122"	"6"	"122"	"144155.627380371"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"74.0815"	"25104"	"25104"	"25076"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.3"	""	"12.3"	""	"8.7"	""	"21.4"	""	"18.4"	"15.1"	""	"861"	"31"	"36.000"	"29.000"	"0.0329589339275296"	"20"	"0"	"0.002327"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLIDEANQDFTNR"	"[K].gLIDEANQDFTNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.9178"	"0.0000"	"1"	"1"	"1"	"861.43585"	"1721.86443"	"1721.86559"	"-0.68"	"-0.00058"	"10/122"	"10"	"122"	"1043542.83300781"	"HCD"	"MS2"	"2.623995"	"58.5"	"100.000"	"74.5629"	"25286"	"25286"	"25277"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"97.4"	""	"60.6"	""	"45.2"	""	"124.6"	"0.6"	"132.6"	"94.7"	""	"866"	"73"	"36.000"	"29.000"	"2.00672516245813E-06"	"23"	"0"	"1.943E-07"	"1.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLIDEANQDFTNR"	"[K].gLIDEANQDFTNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.9552"	"0.0000"	"1"	"1"	"1"	"574.62634"	"1721.86448"	"1721.86559"	"-0.65"	"-0.00037"	"15/122"	"15"	"122"	"1539893.20983887"	"HCD"	"MS2"	"20.80087"	"18.1"	"100.000"	"74.3254"	"25189"	"25189"	"25173"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.3"	""	"21.4"	""	"22.5"	""	"35.3"	""	"34.9"	"37.4"	""	"865"	"67"	"36.000"	"29.000"	"9.0570363715551E-06"	"20"	"0"	"5.014E-05"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLIDEANQDFTNR"	"[K].gLIDEANQDFTNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.9385"	"0.0000"	"1"	"1"	"1"	"574.62634"	"1721.86448"	"1721.86559"	"-0.65"	"-0.00037"	"13/122"	"13"	"122"	"2275984.87426758"	"HCD"	"MS2"	"3.365161"	"21.2"	"100.000"	"74.4600"	"25257"	"25257"	"25244"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.0"	""	"25.8"	""	"18.8"	""	"46.4"	""	"42.2"	"35.9"	""	"865"	"65"	"36.000"	"29.000"	"1.37399803555602E-05"	"20"	"0"	"3.77E-05"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLIDEANQDFTNR"	"[K].gLIDEANQDFTNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.9114"	"0.0000"	"1"	"1"	"1"	"861.43591"	"1721.86455"	"1721.86559"	"-0.61"	"-0.00052"	"10/122"	"10"	"122"	"1114468.68731689"	"HCD"	"MS2"	"1.709701"	"58.8"	"100.000"	"74.3931"	"25230"	"25230"	"25217"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.5"	""	"61.3"	""	"58.9"	""	"131.8"	"1.8"	"128.2"	"83.9"	""	"859"	"79"	"36.000"	"29.000"	"5.94241759768379E-07"	"24"	"0"	"3.135E-07"	"1.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLIDEANQDFTNR"	"[K].gLIDEANQDFTNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.8358"	"0.0000"	"1"	"1"	"1"	"574.62640"	"1721.86466"	"1721.86559"	"-0.54"	"-0.00031"	"13/122"	"13"	"122"	"1675413.43688965"	"HCD"	"MS2"	"24.62886"	"20.1"	"100.000"	"74.1810"	"25144"	"25144"	"25121"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.8"	""	"21.6"	""	"26.3"	""	"38.1"	"1.0"	"32.5"	"39.5"	""	"862"	"67"	"36.000"	"29.000"	"7.80687579919048E-06"	"28"	"0"	"4.714E-05"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLIDEANQDFTNR"	"[K].gLIDEANQDFTNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"861.43683"	"1721.86638"	"1721.86559"	"0.46"	"0.00039"	"6/122"	"6"	"122"	"238433.524536133"	"HCD"	"MS2"	"0"	"17.0"	"100.000"	"74.2766"	"25170"	"25170"	"25142"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.4"	""	"19.3"	""	"20.6"	""	"36.7"	""	"32.3"	"24.1"	""	"878"	"24"	"36.000"	"29.000"	"0.173166755611047"	"18"	"0"	"0.002125"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLIDEANQDFTNR"	"[K].gLIDEANQDFTNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"574.62701"	"1721.86649"	"1721.86559"	"0.52"	"0.00030"	"15/122"	"15"	"122"	"2156533.04937744"	"HCD"	"MS2"	"2.974741"	"22.3"	"100.000"	"74.6411"	"25317"	"25317"	"25301"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.3"	"1.8"	"27.3"	""	"17.9"	""	"49.0"	"0.6"	"45.4"	"37.1"	""	"878"	"66"	"36.000"	"29.000"	"1.23442446454513E-05"	"20"	"0"	"2.083E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSQVKVIDMTGR"	"[K].eLSqVKVIDmTGR.[E]"	"N-Term(TMT6plex); Q4(Deamidated); M10(Oxidation)"	"1"	"1"	"Q5U2Y6"	"Tuftelin-interacting protein 11 OS=Rattus norvegicus OX=10116 GN=Tfip11 PE=1 SV=1"	"Q5U2Y6"	"Tuftelin-interacting protein 11 OS=Rattus norvegicus OX=10116 GN=Tfip11 PE=1 SV=1"	"1"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"3"	"861.46667"	"1721.92607"	"1721.93050"	"-2.57"	"-0.00221"	"4/134"	"4"	"134"	"121139.701660156"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"72.7731"	"24559"	"24559"	"24530"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.5"	""	"11.4"	""	"9.7"	""	"9.9"	""	"14.3"	"12.7"	""	"1105"	"19"	"37.000"	"30.000"	"0.760908231563906"	"24"	"0.00736"	"0.08479"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNSANEDNVTQVR"	"[R].fNSANEDNVTQVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.9254"	"0.0000"	"1"	"1"	"1"	"861.93304"	"1722.85881"	"1722.86084"	"-1.18"	"-0.00101"	"11/132"	"11"	"132"	"532317.368347168"	"HCD"	"MS2"	"0"	"33.4"	"100.000"	"49.5556"	"15157"	"15157"	"15126"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"76.2"	""	"42.7"	""	"39.2"	""	"56.8"	""	"54.6"	"47.1"	""	"843"	"67"	"36.000"	"29.000"	"9.32819420098776E-06"	"21"	"0"	"1.062E-06"	"1.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNSANEDNVTQVR"	"[R].fNSANEDNVTQVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.9437"	"0.0000"	"1"	"1"	"1"	"861.93408"	"1722.86089"	"1722.86084"	"0.03"	"0.00002"	"9/132"	"9"	"132"	"784652.17565918"	"HCD"	"MS2"	"0"	"49.3"	"100.000"	"50.0195"	"15334"	"15334"	"15310"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"100.3"	""	"53.8"	""	"55.4"	""	"88.8"	"0.7"	"86.4"	"81.2"	""	"861"	"71"	"36.000"	"29.000"	"3.47514680522125E-06"	"21"	"0"	"3.816E-07"	"1.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNSANEDNVTQVR"	"[R].fNSANEDNVTQVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"574.95856"	"1722.86112"	"1722.86084"	"0.16"	"0.00009"	"14/132"	"14"	"132"	"3462523.15063477"	"HCD"	"MS2"	"45.66636"	"87.6"	"100.000"	"50.0149"	"15332"	"15332"	"15310"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"139.7"	""	"106.0"	""	"103.0"	""	"142.4"	"0.9"	"169.9"	"168.5"	""	"863"	"35"	"36.000"	"29.000"	"0.0131819846035249"	"15"	"0"	"0.0001051"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGQMTDQVADLR"	"[K].mLGQmTDQVADLR.[A]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.3889"	"0.0000"	"1"	"1"	"1"	"574.96143"	"1722.86972"	"1722.87161"	"-1.09"	"-0.00063"	"11/124"	"11"	"124"	"491418.103820801"	"HCD"	"MS2"	"56.8698"	"16.0"	"100.000"	"71.2385"	"23948"	"23948"	"23921"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.9"	""	"17.2"	""	"24.1"	""	"23.5"	""	"31.8"	"36.8"	""	"919"	"18"	"36.000"	"29.000"	"0.673419232919242"	"15"	"0.001374"	"0.01605"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGQMTDQVADLR"	"[K].mLGQmTDQVADLR.[A]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.2333"	"0.0000"	"1"	"1"	"1"	"574.96191"	"1722.87119"	"1722.87161"	"-0.24"	"-0.00014"	"12/124"	"12"	"124"	"480929.262084961"	"HCD"	"MS2"	"33.45856"	"18.1"	"100.000"	"71.3577"	"23983"	"23983"	"23955"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.7"	""	"17.7"	""	"22.3"	""	"29.9"	""	"38.5"	"42.3"	""	"922"	"30"	"36.000"	"29.000"	"0.0413714674264845"	""	"0"	"0.001055"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGQMTDQVADLR"	"[K].mLGQMTDQVADLR.[A]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"574.96259"	"1722.87320"	"1722.87161"	"0.93"	"0.00053"	"12/124"	"12"	"124"	"278656.048583984"	"HCD"	"MS2"	"32.02501"	"9.7"	"100.000"	"79.3933"	"27236"	"27236"	"27210"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.3"	""	"12.3"	""	"16.7"	""	"11.5"	""	"16.9"	"21.1"	""	"917"	"20"	"36.000"	"29.000"	"0.420087094720937"	"14"	"0"	"0.003762"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNAGAATEEFIK"	"[R].dNAGAATEEFIk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P09117"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3"	"P09117"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3"	"0"	"3"	"3"	"0.2308"	"0.0000"	"1"	"1"	"1"	"575.31201"	"1723.92148"	"1723.92669"	"-3.02"	"-0.00173"	"7/124"	"7"	"124"	"359238.999755859"	"HCD"	"MS2"	"66.70865"	"15.9"	"100.000"	"70.9280"	"23821"	"23821"	"23793"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.5"	""	"17.7"	""	"20.9"	""	"22.2"	""	"33.1"	"38.4"	""	"1050"	"13"	"37.000"	"30.000"	"2.42191726644199"	"23"	"0.009788"	"0.1275"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNAGAATEEFIK"	"[R].dNAGAATEEFIk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P09117"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3"	"P09117"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"575.31396"	"1723.92734"	"1723.92669"	"0.38"	"0.00022"	"10/124"	"10"	"124"	"490295.688293457"	"HCD"	"MS2"	"59.5701"	"20.9"	"100.000"	"70.9735"	"23826"	"23826"	"23797"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.0"	""	"22.2"	""	"23.5"	""	"36.3"	"0.4"	"47.7"	"44.3"	""	"1046"	"32"	"37.000"	"30.000"	"0.0307965231750973"	"22"	"0"	"6.911E-05"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYSEYTDGTFTK"	"[K].ALYSEYTDGTFTk.[T]"	"K13(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"862.93298"	"1724.85869"	"1724.85805"	"0.37"	"0.00032"	"6/112"	"6"	"112"	"76079.3579711914"	"HCD"	"MS2"	"34.88056"	"4.6"	"100.000"	"78.1592"	"26745"	"26745"	"26724"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.4"	""	"6.3"	""	"7.3"	""	"6.4"	""	"11.4"	"9.7"	""	"876"	"37"	"36.000"	"29.000"	"0.00787905460826409"	"17"	"0.001374"	"0.01752"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGIETIANEYSDR"	"[R].aGGIETIANEYSDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.9057"	"0.0000"	"1"	"1"	"1"	"862.93579"	"1724.86431"	"1724.86526"	"-0.55"	"-0.00048"	"9/130"	"9"	"130"	"185405.214477539"	"HCD"	"MS2"	"0"	"12.2"	"100.000"	"75.5069"	"25663"	"25663"	"25643"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.7"	""	"14.8"	""	"16.4"	""	"15.6"	""	"29.2"	"23.3"	""	"884"	"53"	"36.000"	"29.000"	"0.000218485323648181"	"20"	"0"	"3.583E-05"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGIETIANEYSDR"	"[R].aGGIETIANEYSDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"575.62640"	"1724.86466"	"1724.86526"	"-0.35"	"-0.00020"	"16/130"	"16"	"130"	"786697.184020996"	"HCD"	"MS2"	"18.68494"	"10.5"	"100.000"	"75.4698"	"25648"	"25648"	"25627"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.8"	""	"16.1"	""	"10.9"	""	"18.4"	""	"18.7"	"22.4"	""	"885"	"42"	"36.000"	"29.000"	"0.00289676507024769"	"23"	"0"	"1.024E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGIETIANEYSDR"	"[R].aGGIETIANEYSDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"862.93616"	"1724.86504"	"1724.86526"	"-0.13"	"-0.00011"	"7/130"	"7"	"130"	"192103.875061035"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"75.3671"	"25617"	"25617"	"25598"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.4"	""	"13.2"	""	"11.0"	""	"21.2"	""	"25.5"	"20.2"	""	"886"	"48"	"36.000"	"29.000"	"0.000736891804113986"	"22"	"0"	"4.122E-05"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGIETIANEYSDR"	"[R].aGGIETIANEYSDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"0.8444"	"0.0000"	"1"	"1"	"1"	"575.62683"	"1724.86594"	"1724.86526"	"0.40"	"0.00023"	"13/130"	"13"	"130"	"1252906.1348877"	"HCD"	"MS2"	"27.62858"	"16.8"	"100.000"	"75.2081"	"25553"	"25553"	"25534"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.5"	""	"19.2"	""	"25.5"	""	"29.8"	""	"24.1"	"37.3"	""	"884"	"45"	"36.000"	"29.000"	"0.00149424657603044"	"23"	"0"	"1.521E-05"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGIETIANEYSDR"	"[R].aGGIETIANEYSDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"862.93695"	"1724.86662"	"1724.86526"	"0.79"	"0.00068"	"9/130"	"9"	"130"	"108765.662109375"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"75.0408"	"25486"	"25486"	"25462"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.3"	""	"8.6"	""	"7.9"	""	"15.2"	""	"22.1"	"15.5"	""	"887"	"31"	"36.000"	"29.000"	"0.0314697740091763"	"15"	"0.0002479"	"0.00585"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGIETIANEYSDR"	"[R].aGGIETIANEYSDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"862.93732"	"1724.86736"	"1724.86526"	"1.22"	"0.00105"	"7/130"	"7"	"130"	"160233.54486084"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"75.2124"	"25544"	"25544"	"25520"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.2"	""	"10.7"	""	"17.7"	""	"22.0"	""	"25.5"	"23.7"	""	"909"	"27"	"36.000"	"29.000"	"0.089853270143084"	"14"	"0"	"0.0006461"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMDDEESWIK"	"[R].dMDDEESWIk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"575.95148"	"1725.83988"	"1725.84057"	"-0.40"	"-0.00023"	"7/84"	"7"	"84"	"278686.997680664"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"86.1680"	"29927"	"29927"	"29908"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.6"	""	"8.3"	""	"12.4"	""	"13.5"	""	"19.5"	"22.6"	""	"733"	"29"	"35.000"	"28.000"	"0.0508246011281547"	"18"	"0.0003538"	"0.006359"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVVEASEAAYK"	"[K].nSVVEASEAAYk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"863.47131"	"1725.93535"	"1725.94234"	"-4.05"	"-0.00349"	"10/122"	"10"	"122"	"283884.659973145"	"HCD"	"MS2"	"0"	"23.6"	"100.000"	"62.1250"	"20228"	"20228"	"20215"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.5"	""	"25.3"	""	"29.7"	""	"44.9"	""	"47.9"	"50.2"	""	"1022"	"61"	"37.000"	"30.000"	"4.16313889134649E-05"	"16"	"0"	"1.191E-05"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVVEASEAAYK"	"[K].nSVVEASEAAYk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.98474"	"1725.93967"	"1725.94234"	"-1.54"	"-0.00089"	"11/122"	"11"	"122"	"1946851.16699219"	"HCD"	"MS2"	"23.19067"	"48.3"	"100.000"	"62.1160"	"20224"	"20224"	"20215"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.2"	""	"49.8"	""	"55.5"	""	"89.6"	""	"114.0"	"107.7"	""	"995"	"32"	"36.000"	"29.000"	"0.029498034897855"	"15"	"0"	"0.0002275"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVVEASEAAYK"	"[K].nSVVEASEAAYk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"863.47357"	"1725.93987"	"1725.94234"	"-1.43"	"-0.00123"	"17/122"	"17"	"122"	"299908.203125"	"HCD"	"MS2"	"0"	"25.5"	"100.000"	"61.7150"	"20080"	"20080"	"20049"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.8"	""	"28.5"	""	"30.2"	""	"47.6"	""	"54.0"	"55.8"	""	"997"	"72"	"36.000"	"29.000"	"2.94215238465664E-06"	"21"	"0"	"8.523E-07"	"1.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVVEASEAAYK"	"[K].nSVVEASEAAYk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.98492"	"1725.94022"	"1725.94234"	"-1.23"	"-0.00071"	"9/122"	"9"	"122"	"2266607.61669922"	"HCD"	"MS2"	"23.72874"	"52.2"	"100.000"	"61.9557"	"20175"	"20175"	"20163"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.3"	""	"62.2"	""	"68.2"	""	"95.1"	""	"104.9"	"112.8"	""	"1012"	"51"	"37.000"	"30.000"	"0.000382957444880613"	"16"	"0"	"8.028E-06"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVVEASEAAYK"	"[K].nSVVEASEAAYk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.9306"	"0.0000"	"1"	"1"	"1"	"863.47400"	"1725.94072"	"1725.94234"	"-0.94"	"-0.00081"	"10/122"	"10"	"122"	"374922.500793457"	"HCD"	"MS2"	"0"	"27.2"	"100.000"	"62.0082"	"20196"	"20196"	"20182"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.5"	""	"29.3"	""	"32.7"	""	"48.3"	""	"57.6"	"58.6"	""	"1003"	"72"	"37.000"	"30.000"	"3.23050886655862E-06"	"22"	"0"	"1.729E-07"	"1.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVVEASEAAYK"	"[K].nSVVEASEAAYk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"3"	"3"	"0.9787"	"0.0000"	"1"	"1"	"1"	"575.98547"	"1725.94187"	"1725.94234"	"-0.27"	"-0.00016"	"8/122"	"8"	"122"	"1409150.92694092"	"HCD"	"MS2"	"0"	"41.0"	"100.000"	"61.8203"	"20107"	"20107"	"20081"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.2"	""	"52.0"	""	"50.2"	""	"77.5"	""	"76.4"	"80.4"	""	"1001"	"47"	"36.000"	"30.000"	"0.00110256469475825"	"16"	"0"	"4.295E-06"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVVEASEAAYK"	"[K].nSVVEASEAAYk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.9846"	"0.0000"	"1"	"1"	"1"	"863.47491"	"1725.94255"	"1725.94234"	"0.13"	"0.00011"	"18/122"	"18"	"122"	"275204.087097168"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"61.8272"	"20110"	"20110"	"20081"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.8"	""	"18.9"	""	"31.1"	""	"41.3"	""	"50.7"	"48.3"	""	"1009"	"65"	"37.000"	"30.000"	"1.54832159314334E-05"	"17"	"0"	"7.077E-06"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVVEASEAAYK"	"[K].nSVVEASEAAYk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"575.98572"	"1725.94260"	"1725.94234"	"0.15"	"0.00009"	"14/122"	"14"	"122"	"1152419.73016357"	"HCD"	"MS2"	"34.12218"	"34.8"	"100.000"	"61.6256"	"20043"	"20043"	"20017"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.5"	""	"39.7"	""	"40.9"	""	"65.5"	""	"74.2"	"67.4"	""	"999"	"39"	"36.000"	"29.000"	"0.00652432358621854"	"16"	"0"	"2.251E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPNASPGDAGEQAIR"	"[R].dPNASPGDAGEQAIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"863.93146"	"1726.85564"	"1726.85576"	"-0.07"	"-0.00006"	"6/156"	"6"	"156"	"155540.79284668"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"40.0647"	"11288"	"11288"	"11257"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.4"	""	"8.1"	""	"7.0"	""	"11.6"	""	"13.6"	"15.3"	""	"777"	"42"	"35.000"	"28.000"	"0.00258458621184376"	"22"	"0"	"0.0003624"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPNASPGDAGEQAIR"	"[R].dPNASPGDAGEQAIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"863.93152"	"1726.85576"	"1726.85576"	"0.00"	"0.00000"	"6/156"	"6"	"156"	"126351.38293457"	"HCD"	"MS2"	"0"	"6.9"	"100.000"	"39.8340"	"11203"	"11203"	"11172"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.4"	""	"6.5"	""	"8.9"	""	"11.8"	""	"12.8"	"13.4"	""	"777"	"19"	"35.000"	"28.000"	"0.474669167974053"	"14"	"0.0008629"	"0.01071"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MMLGAEGGEGFVVK"	"[-].mmLGAEGGEGFVVk.[V]"	"N-Term(Prot)(Acetyl); M1(Oxidation); M2(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"864.43005"	"1727.85283"	"1727.85456"	"-1.00"	"-0.00086"	"7/110"	"7"	"110"	"70862.4059448242"	"HCD"	"MS2"	"0"	"1.6"	"100.000"	"94.5272"	"33122"	"33122"	"33116"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	"1.9"	""	"6.5"	""	"3.8"	"3.3"	""	"729"	"19"	"35.000"	"28.000"	"0.487189065781179"	"14"	"0.0006732"	"0.008953"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MMLGAEGGEGFVVK"	"[-].mmLGAEGGEGFVVk.[V]"	"N-Term(Prot)(Acetyl); M1(Oxidation); M2(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"864.43042"	"1727.85356"	"1727.85456"	"-0.58"	"-0.00050"	"7/110"	"7"	"110"	"204491.032958984"	"HCD"	"MS2"	"37.4621"	"4.3"	"100.000"	"94.2474"	"33024"	"33024"	"33016"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.1"	""	"7.1"	""	"3.7"	""	"8.4"	""	"9.8"	"9.5"	""	"747"	"8"	"35.000"	"28.000"	"6.40163054354398"	"13"	"0.001635"	"0.0198"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MMLGAEGGEGFVVK"	"[-].mmLGAEGGEGFVVk.[V]"	"N-Term(Prot)(Acetyl); M1(Oxidation); M2(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"864.43073"	"1727.85417"	"1727.85456"	"-0.22"	"-0.00019"	"5/110"	"5"	"110"	"66524.1247558594"	"HCD"	"MS2"	"0"	"1.3"	"100.000"	"94.5209"	"33142"	"33142"	"33129"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.9"	""	""	""	""	""	"5.1"	""	"4.8"	""	""	"743"	"6"	"35.000"	"28.000"	"9.43971360111567"	"13"	"0.001374"	"0.01696"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MMLGAEGGEGFVVK"	"[-].mmLGAEGGEGFVVk.[V]"	"N-Term(Prot)(Acetyl); M1(Oxidation); M2(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"864.43127"	"1727.85527"	"1727.85456"	"0.41"	"0.00036"	"8/110"	"8"	"110"	"174355.811767578"	"HCD"	"MS2"	"42.71581"	"3.9"	"100.000"	"94.2481"	"33044"	"33044"	"33036"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.2"	""	"3.6"	""	"4.3"	""	"8.9"	""	"7.5"	"9.1"	""	"754"	"14"	"35.000"	"28.000"	"1.60450601751421"	"13"	"0"	"0.001868"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYETATLSEIK"	"[K].dYETATLSEIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"864.47467"	"1727.94206"	"1727.94675"	"-2.71"	"-0.00234"	"6/96"	"6"	"96"	"113158.498474121"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"82.3241"	"28416"	"28416"	"28385"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.2"	""	"12.8"	""	"10.0"	""	"14.9"	""	"20.9"	"23.2"	""	"945"	"22"	"36.000"	"29.000"	"0.273780059061701"	"17"	"0.0008629"	"0.01019"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYETATLSEIK"	"[K].dYETATLSEIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"864.47626"	"1727.94524"	"1727.94675"	"-0.88"	"-0.00076"	"11/96"	"11"	"96"	"114901.296508789"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"82.4127"	"28454"	"28454"	"28434"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.0"	""	"8.6"	""	"11.6"	""	"17.7"	""	"23.4"	"19.3"	""	"953"	"41"	"36.000"	"29.000"	"0.00394514441008927"	"22"	"0"	"0.001196"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYETATLSEIK"	"[K].dYETATLSEIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"576.65338"	"1727.94559"	"1727.94675"	"-0.67"	"-0.00039"	"10/96"	"10"	"96"	"344726.270751953"	"HCD"	"MS2"	"30.3386"	"14.3"	"100.000"	"82.2802"	"28398"	"28398"	"28376"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.8"	""	"14.0"	""	"14.4"	""	"28.9"	""	"32.2"	"33.4"	""	"945"	"24"	"36.000"	"29.000"	"0.191602782999361"	"17"	"0"	"0.003725"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYETATLSEIK"	"[K].dYETATLSEIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"576.65356"	"1727.94614"	"1727.94675"	"-0.35"	"-0.00020"	"10/96"	"10"	"96"	"326297.651916504"	"HCD"	"MS2"	"6.369666"	"12.3"	"100.000"	"82.6396"	"28544"	"28544"	"28528"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.5"	""	"13.1"	""	"21.9"	""	"19.2"	""	"24.3"	"25.5"	""	"957"	"35"	"36.000"	"29.000"	"0.0168998146745451"	"16"	"0"	"0.001075"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYETATLSEIK"	"[K].dYETATLSEIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"576.65356"	"1727.94614"	"1727.94675"	"-0.35"	"-0.00020"	"11/96"	"11"	"96"	"445373.862670898"	"HCD"	"MS2"	"18.25867"	"16.8"	"100.000"	"82.5578"	"28508"	"28508"	"28494"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.0"	""	"16.2"	""	"25.2"	""	"22.1"	""	"35.7"	"40.2"	""	"957"	"37"	"36.000"	"29.000"	"0.00928713892428146"	"19"	"0"	"0.000668"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYETATLSEIK"	"[K].dYETATLSEIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"576.65399"	"1727.94742"	"1727.94675"	"0.39"	"0.00022"	"8/96"	"8"	"96"	"318646.858581543"	"HCD"	"MS2"	"17.01243"	"12.4"	"100.000"	"82.3113"	"28413"	"28413"	"28393"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.4"	""	"12.4"	""	"13.7"	""	"24.2"	""	"27.8"	"25.8"	""	"962"	"22"	"36.000"	"29.000"	"0.307004736857654"	"14"	"0.0003538"	"0.006633"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGDPQGVQQAK"	"[R].iEGDPQGVQQAk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"864.48730"	"1727.96733"	"1727.96922"	"-1.09"	"-0.00094"	"4/104"	"4"	"104"	"113074.756164551"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"49.4135"	"15087"	"15087"	"15059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.0"	""	"10.0"	""	"9.1"	""	"12.4"	"1.7"	"17.1"	"16.8"	""	"957"	"8"	"36.000"	"29.000"	"7.70693936432803"	"14"	"0.008052"	"0.09798"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIVEDWDLMER"	"[R].hGIVEDWDLMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"576.95715"	"1728.85691"	"1728.85767"	"-0.44"	"-0.00025"	"13/100"	"13"	"100"	"938593.698181152"	"HCD"	"MS2"	"14.11562"	"17.7"	"100.000"	"83.8626"	"29022"	"29022"	"29007"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.8"	""	"25.0"	""	"23.3"	""	"24.5"	""	"35.5"	"32.4"	""	"771"	"40"	"35.000"	"28.000"	"0.00429560542699612"	"15"	"0"	"3.231E-05"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIVEDWDLMER"	"[R].hGIVEDWDLMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"576.95740"	"1728.85764"	"1728.85767"	"-0.02"	"-0.00001"	"13/100"	"13"	"100"	"1194326.1651001"	"HCD"	"MS2"	"12.68872"	"19.4"	"100.000"	"83.8924"	"29032"	"29032"	"29012"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.8"	""	"28.1"	""	"21.7"	""	"30.7"	""	"37.0"	"39.7"	""	"780"	"48"	"35.000"	"28.000"	"0.000591649643309141"	"18"	"0"	"1.875E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDDAVVQSDMK"	"[R].fDDAVVQSDmk.[H]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"864.94617"	"1728.88506"	"1728.88786"	"-1.62"	"-0.00140"	"8/102"	"8"	"102"	"181959.325866699"	"HCD"	"MS2"	"0"	"14.4"	"100.000"	"66.7438"	"22116"	"22116"	"22093"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.6"	""	"16.9"	""	"17.1"	""	"28.8"	""	"27.8"	"22.9"	""	"865"	"48"	"36.000"	"29.000"	"0.000719425971285099"	"16"	"0"	"0.0008793"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDDAVVQSDMK"	"[R].fDDAVVQSDmk.[H]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"864.94659"	"1728.88591"	"1728.88786"	"-1.13"	"-0.00097"	"7/102"	"7"	"102"	"161814.865966797"	"HCD"	"MS2"	"0"	"12.1"	"100.000"	"66.8396"	"22140"	"22140"	"22116"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.6"	""	"10.2"	""	"15.1"	""	"23.1"	""	"26.3"	"19.4"	""	"866"	"37"	"36.000"	"29.000"	"0.00850134999870008"	"19"	"0.0006732"	"0.008313"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDDAVVQSDMK"	"[R].fDDAVVQSDmk.[H]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"576.96698"	"1728.88639"	"1728.88786"	"-0.85"	"-0.00049"	"10/102"	"10"	"102"	"776213.942199707"	"HCD"	"MS2"	"2.843414"	"24.7"	"100.000"	"66.7346"	"22112"	"22112"	"22093"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.0"	""	"30.8"	""	"29.5"	""	"41.3"	"0.5"	"49.5"	"50.0"	""	"872"	"33"	"36.000"	"29.000"	"0.0195652990010846"	"15"	"0.0003538"	"0.006637"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDDAVVQSDMK"	"[R].fDDAVVQSDmk.[H]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"576.96710"	"1728.88675"	"1728.88786"	"-0.64"	"-0.00037"	"11/102"	"11"	"102"	"779979.261352539"	"HCD"	"MS2"	"15.01431"	"27.3"	"100.000"	"66.9133"	"22170"	"22170"	"22148"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.7"	""	"30.8"	""	"41.1"	""	"45.5"	""	"50.6"	"56.7"	""	"869"	"35"	"36.000"	"29.000"	"0.0134893114104177"	"15"	"0.0008629"	"0.009631"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDDAVVQSDMK"	"[R].fDDAVVQSDmk.[H]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"576.96729"	"1728.88730"	"1728.88786"	"-0.32"	"-0.00019"	"10/102"	"10"	"102"	"758843.446960449"	"HCD"	"MS2"	"20.15808"	"24.6"	"100.000"	"67.0573"	"22244"	"22244"	"22220"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.0"	""	"27.2"	""	"33.9"	""	"34.2"	"1.2"	"38.6"	"65.0"	""	"880"	"24"	"36.000"	"29.000"	"0.171574474137679"	"14"	"0.001374"	"0.01808"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAVAGPEMQVK"	"[R].dLAVAGPEmQVk.[L]"	"N-Term(TMT6plex); M9(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"866.48865"	"1731.97002"	"1731.97153"	"-0.87"	"-0.00075"	"6/106"	"6"	"106"	"99026.1442260742"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"64.9107"	"21370"	"21370"	"21342"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.1"	""	"6.3"	""	"6.9"	""	"12.0"	""	"7.8"	"9.2"	""	"1033"	"22"	"37.000"	"30.000"	"0.309792090885971"	"21"	"0.0001301"	"0.003869"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAVAGPEMQVK"	"[R].dLAVAGPEmQVk.[L]"	"N-Term(TMT6plex); M9(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"866.48871"	"1731.97014"	"1731.97153"	"-0.80"	"-0.00069"	"7/106"	"7"	"106"	"69438.462890625"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"65.0121"	"21396"	"21396"	"21367"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.6"	""	"5.0"	""	"6.9"	""	"7.3"	""	"9.9"	"7.6"	""	"1033"	"12"	"37.000"	"30.000"	"3.36566065532425"	"13"	"0.005119"	"0.05831"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAVAGPEMQVK"	"[R].dLAVAGPEmQVk.[L]"	"N-Term(TMT6plex); M9(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.6786"	"0.0000"	"1"	"1"	"1"	"577.99500"	"1731.97043"	"1731.97153"	"-0.63"	"-0.00037"	"12/106"	"12"	"106"	"855609.168273926"	"HCD"	"MS2"	"71.57967"	"27.2"	"100.000"	"65.0030"	"21392"	"21392"	"21367"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.6"	""	"33.1"	""	"37.7"	""	"56.6"	""	"43.9"	"50.9"	""	"1032"	"28"	"37.000"	"30.000"	"0.0740712547610486"	"24"	"0"	"0.00168"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAVAGPEMQVK"	"[R].dLAVAGPEmQVk.[L]"	"N-Term(TMT6plex); M9(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"577.99518"	"1731.97098"	"1731.97153"	"-0.32"	"-0.00018"	"12/106"	"12"	"106"	"487183.398376465"	"HCD"	"MS2"	"37.08049"	"20.2"	"100.000"	"65.0664"	"21433"	"21433"	"21405"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.1"	""	"20.7"	""	"30.2"	""	"35.9"	""	"38.7"	"39.2"	""	"1057"	"35"	"37.000"	"30.000"	"0.0178667265934861"	"17"	"0"	"0.001303"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSSQEAASSFGDDR"	"[R].fSSQEAASSFGDDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"866.90149"	"1732.79570"	"1732.79757"	"-1.08"	"-0.00094"	"14/146"	"14"	"146"	"287244.111572266"	"HCD"	"MS2"	"16.55489"	"20.8"	"100.000"	"59.6356"	"19251"	"19251"	"19222"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.2"	""	"22.1"	""	"21.2"	""	"46.4"	""	"36.8"	"40.9"	""	"374"	"25"	"32.000"	"25.000"	"0.0642453362572766"	"14"	"0"	"9.755E-05"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSSQEAASSFGDDR"	"[R].fSSQEAASSFGDDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"866.90253"	"1732.79778"	"1732.79757"	"0.12"	"0.00010"	"13/146"	"13"	"146"	"330803.702758789"	"HCD"	"MS2"	"14.73589"	"25.3"	"100.000"	"59.4035"	"19171"	"19171"	"19142"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.9"	""	"25.8"	""	"26.6"	""	"54.0"	"2.1"	"48.4"	"43.0"	""	"387"	"21"	"32.000"	"25.000"	"0.153702513419148"	"14"	"0"	"0.0001758"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDANTDLIGGSPK"	"[K].sDANTDLIGGSPk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P53987"	"Monocarboxylate transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc16a1 PE=1 SV=1"	"P53987"	"Monocarboxylate transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc16a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"866.97650"	"1732.94573"	"1732.94815"	"-1.40"	"-0.00121"	"11/134"	"11"	"134"	"143617.090576172"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"58.9384"	"18981"	"18981"	"18959"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.4"	""	"13.4"	""	"16.4"	""	"22.2"	""	"27.5"	"23.5"	""	"1180"	"31"	"37.000"	"30.000"	"0.0432366474551953"	"21"	"0.0006732"	"0.00905"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDANTDLIGGSPK"	"[K].sDANTDLIGGSPk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P53987"	"Monocarboxylate transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc16a1 PE=1 SV=1"	"P53987"	"Monocarboxylate transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc16a1 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"866.97766"	"1732.94805"	"1732.94815"	"-0.06"	"-0.00005"	"7/134"	"7"	"134"	"132090.914794922"	"HCD"	"MS2"	"100"	"12.7"	"100.000"	"59.0945"	"19030"	"19030"	"19000"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.0"	""	"15.6"	""	"10.1"	""	"22.5"	""	"26.6"	"26.8"	""	"1168"	"10"	"37.000"	"30.000"	"6.11523072061725"	"19"	"0.001465"	"0.01821"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.94830"	"1734.83036"	"1734.83250"	"-1.24"	"-0.00072"	"4/116"	"4"	"116"	"594221.232666016"	"HCD"	"MS2"	"33.79634"	"9.8"	"100.000"	"91.8354"	"32122"	"32122"	"32112"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.7"	""	"14.0"	""	"12.8"	""	"16.7"	""	"22.8"	"17.5"	""	"540"	"8"	"34.000"	"27.000"	"4.46029685521834"	"13"	"0"	"0.002384"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"867.91931"	"1734.83135"	"1734.83250"	"-0.67"	"-0.00058"	"6/116"	"6"	"116"	"192276.158996582"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"91.7827"	"32108"	"32108"	"32095"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.1"	""	"3.8"	""	"6.0"	""	"2.3"	""	"7.5"	"6.1"	""	"554"	"14"	"34.000"	"27.000"	"0.989645761680844"	"13"	"0.0001301"	"0.004681"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.94873"	"1734.83164"	"1734.83250"	"-0.50"	"-0.00029"	"6/116"	"6"	"116"	"459168.703430176"	"HCD"	"MS2"	"50.54071"	"7.8"	"100.000"	"91.8684"	"32141"	"32141"	"32126"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.5"	""	"9.9"	""	"11.9"	""	"14.4"	""	"16.1"	"12.1"	""	"558"	"11"	"34.000"	"27.000"	"1.99344474975068"	"13"	"0"	"0.0002759"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"867.91949"	"1734.83171"	"1734.83250"	"-0.46"	"-0.00039"	"5/116"	"5"	"116"	"88537.4414672852"	"HCD"	"MS2"	"0"	"1.8"	"100.000"	"92.6126"	"32432"	"32432"	"32415"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.5"	""	""	""	"2.3"	""	"2.8"	""	"4.1"	"4.6"	""	"556"	"3"	"34.000"	"27.000"	"13.0330120236384"	"13"	"0.007627"	"0.09178"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"867.91949"	"1734.83171"	"1734.83250"	"-0.46"	"-0.00039"	"7/116"	"7"	"116"	"131462.392944336"	"HCD"	"MS2"	"0"	"1.8"	"100.000"	"92.5438"	"32394"	"32394"	"32384"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	"4.1"	""	""	""	"4.5"	""	"4.5"	"4.3"	""	"556"	"25"	"34.000"	"27.000"	"0.0885206911039862"	"14"	"0"	"0.001371"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.94885"	"1734.83200"	"1734.83250"	"-0.29"	"-0.00017"	"7/116"	"7"	"116"	"1348554.49829102"	"HCD"	"MS2"	"2.678168"	"10.9"	"100.000"	"92.1168"	"32229"	"32229"	"32218"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.3"	""	"15.2"	""	"21.1"	""	"14.2"	""	"20.8"	"18.8"	""	"558"	"13"	"34.000"	"27.000"	"1.51566842486389"	"13"	"0"	"0.0001947"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"867.91968"	"1734.83208"	"1734.83250"	"-0.24"	"-0.00021"	"7/116"	"7"	"116"	"1164338.58721924"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"92.2589"	"32284"	"32284"	"32276"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.0"	""	"22.4"	""	"27.8"	""	"15.1"	""	"28.4"	"24.4"	""	"558"	"28"	"34.000"	"27.000"	"0.0450406037354589"	"14"	"0"	"0.0003019"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"867.91968"	"1734.83208"	"1734.83250"	"-0.24"	"-0.00021"	"7/116"	"7"	"116"	"1582136.05029297"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"91.9870"	"32180"	"32180"	"32174"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.4"	""	"30.4"	""	"29.3"	""	"22.6"	""	"29.8"	"34.3"	""	"558"	"30"	"34.000"	"27.000"	"0.0262787197429872"	"15"	"0"	"0.001025"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.94897"	"1734.83237"	"1734.83250"	"-0.08"	"-0.00004"	"4/116"	"4"	"116"	"392629.484802246"	"HCD"	"MS2"	"13.96267"	"8.9"	"100.000"	"92.4025"	"32339"	"32339"	"32329"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.8"	""	"9.9"	""	"11.4"	""	"17.7"	""	"20.6"	"14.7"	""	"565"	"8"	"34.000"	"27.000"	"4.90928734121699"	"13"	"0.0006732"	"0.009335"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"867.91986"	"1734.83245"	"1734.83250"	"-0.03"	"-0.00003"	"6/116"	"6"	"116"	"128122.176574707"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"91.7245"	"32081"	"32081"	"32073"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.1"	""	"3.5"	""	"6.3"	""	"2.1"	""	"6.7"	"7.0"	""	"565"	"19"	"34.000"	"27.000"	"0.367297905794405"	"14"	"0"	"0.002415"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"867.91986"	"1734.83245"	"1734.83250"	"-0.03"	"-0.00003"	"7/116"	"7"	"116"	"1080828.24871826"	"HCD"	"MS2"	"0"	"14.2"	"100.000"	"92.3209"	"32318"	"32318"	"32306"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.2"	""	"22.9"	""	"18.0"	""	"15.2"	""	"27.2"	"26.1"	""	"565"	"30"	"34.000"	"27.000"	"0.0261227234137548"	"19"	"0"	"0.0007834"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.94910"	"1734.83274"	"1734.83250"	"0.14"	"0.00008"	"7/116"	"7"	"116"	"454745.915405273"	"HCD"	"MS2"	"8.643183"	"7.5"	"100.000"	"92.4180"	"32355"	"32355"	"32345"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.8"	""	"6.1"	""	"10.0"	""	"13.0"	""	"12.6"	"20.1"	""	"563"	"12"	"34.000"	"27.000"	"1.75986113016355"	"13"	"0"	"0.0004365"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"867.92010"	"1734.83293"	"1734.83250"	"0.25"	"0.00022"	"7/116"	"7"	"116"	"1723060.2833252"	"HCD"	"MS2"	"0"	"23.3"	"100.000"	"92.0520"	"32213"	"32213"	"32204"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.8"	""	"39.8"	""	"36.5"	""	"25.5"	""	"38.1"	"41.3"	""	"563"	"25"	"34.000"	"27.000"	"0.0834600036151101"	"14"	"0"	"0.001008"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.94922"	"1734.83310"	"1734.83250"	"0.35"	"0.00020"	"11/116"	"11"	"116"	"1319466.33428955"	"HCD"	"MS2"	"8.292271"	"14.5"	"100.000"	"92.1515"	"32251"	"32251"	"32235"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.2"	""	"19.3"	""	"19.9"	""	"19.9"	""	"31.8"	"25.5"	""	"563"	"7"	"34.000"	"27.000"	"6.17274589301151"	"13"	"0"	"0.0004495"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVEFDEITPDDR"	"[K].lGVEFDEITPDDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P70623"	"Fatty acid-binding protein, adipocyte OS=Rattus norvegicus OX=10116 GN=Fabp4 PE=1 SV=3"	"P70623"	"Fatty acid-binding protein, adipocyte OS=Rattus norvegicus OX=10116 GN=Fabp4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"867.94061"	"1734.87395"	"1734.87476"	"-0.47"	"-0.00041"	"7/112"	"7"	"112"	"136703.66583252"	"HCD"	"MS2"	"4.442922"	"4.4"	"100.000"	"97.7159"	"34247"	"34247"	"34237"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.6"	""	"2.0"	""	"3.9"	""	"6.5"	""	"6.6"	"6.8"	""	"826"	"14"	"36.000"	"29.000"	"1.5629678748816"	"13"	"0.00379"	"0.03909"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVEFDEITPDDR"	"[K].lGVEFDEITPDDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P70623"	"Fatty acid-binding protein, adipocyte OS=Rattus norvegicus OX=10116 GN=Fabp4 PE=1 SV=3"	"P70623"	"Fatty acid-binding protein, adipocyte OS=Rattus norvegicus OX=10116 GN=Fabp4 PE=1 SV=3"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"867.94104"	"1734.87480"	"1734.87476"	"0.02"	"0.00002"	"11/112"	"11"	"112"	"119507.197509766"	"HCD"	"MS2"	"3.184102"	"6.1"	"100.000"	"97.6563"	"34250"	"34250"	"34238"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.5"	""	"4.5"	""	"7.2"	""	"6.1"	""	"10.8"	"8.3"	""	"829"	"37"	"36.000"	"29.000"	"0.00904741548458924"	"26"	"0"	"0.001517"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVEFDEITPDDR"	"[K].lGVEFDEITPDDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P70623"	"Fatty acid-binding protein, adipocyte OS=Rattus norvegicus OX=10116 GN=Fabp4 PE=1 SV=3"	"P70623"	"Fatty acid-binding protein, adipocyte OS=Rattus norvegicus OX=10116 GN=Fabp4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"867.94116"	"1734.87505"	"1734.87476"	"0.17"	"0.00014"	"5/112"	"5"	"112"	"80298.4515991211"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"97.3663"	"34152"	"34152"	"34143"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.7"	""	"1.7"	""	"4.7"	""	"5.2"	""	"4.4"	"3.3"	""	"833"	"15"	"36.000"	"29.000"	"1.19293012446609"	"13"	"0.002795"	"0.0266"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVEFDEITPDDR"	"[K].lGVEFDEITPDDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P70623"	"Fatty acid-binding protein, adipocyte OS=Rattus norvegicus OX=10116 GN=Fabp4 PE=1 SV=3"	"P70623"	"Fatty acid-binding protein, adipocyte OS=Rattus norvegicus OX=10116 GN=Fabp4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"867.94165"	"1734.87602"	"1734.87476"	"0.73"	"0.00063"	"10/112"	"10"	"112"	"148488.312744141"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"97.4439"	"34155"	"34155"	"34146"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.8"	""	"1.9"	""	"6.2"	""	"5.1"	""	"4.1"	"4.4"	""	"832"	"30"	"36.000"	"29.000"	"0.0401877165659762"	"14"	"0"	"0.001797"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDLSPEEAYDLAR"	"[R].qDLSPEEAYDLAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"868.43732"	"1735.86736"	"1735.87001"	"-1.53"	"-0.00133"	"9/136"	"9"	"136"	"114495.626953125"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"80.2314"	"27577"	"27577"	"27550"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.3"	""	"7.8"	""	"5.1"	""	"9.4"	""	"18.4"	"10.5"	""	"790"	"19"	"35.000"	"28.000"	"0.525529495101346"	"21"	"0.002871"	"0.0269"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDLSPEEAYDLAR"	"[R].qDLSPEEAYDLAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"868.43787"	"1735.86846"	"1735.87001"	"-0.90"	"-0.00078"	"8/136"	"8"	"136"	"114095.973083496"	"HCD"	"MS2"	"17.01112"	"6.7"	"100.000"	"80.2055"	"27563"	"27563"	"27534"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.5"	""	"7.0"	""	"7.9"	""	"9.5"	"1.4"	"16.0"	"13.7"	""	"799"	"11"	"36.000"	"29.000"	"3.20270386323378"	"20"	"0.000936"	"0.0116"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDELLETSLK"	"[K].tEDELLETSLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"579.32794"	"1735.96927"	"1735.97297"	"-2.13"	"-0.00123"	"11/96"	"11"	"96"	"1197047.07073975"	"HCD"	"MS2"	"17.67557"	"21.8"	"100.000"	"89.6711"	"31291"	"31291"	"31278"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.1"	""	"34.5"	""	"24.4"	""	"38.0"	""	"44.5"	"42.5"	""	"1086"	"17"	"37.000"	"30.000"	"1.03705031940147"	"19"	"0.006685"	"0.07456"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDELLETSLK"	"[K].tEDELLETSLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.4857"	"0.0000"	"1"	"1"	"1"	"579.32849"	"1735.97092"	"1735.97297"	"-1.18"	"-0.00068"	"12/96"	"12"	"96"	"1997925.54486084"	"HCD"	"MS2"	"5.514312"	"50.3"	"100.000"	"89.4718"	"31212"	"31212"	"31205"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.3"	""	"51.4"	""	"61.9"	""	"98.8"	""	"106.8"	"103.0"	""	"1091"	"35"	"37.000"	"30.000"	"0.0158779618790533"	""	"0"	"0.0004151"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDELLETSLK"	"[K].tEDELLETSLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"868.48956"	"1735.97185"	"1735.97297"	"-0.64"	"-0.00056"	"10/96"	"10"	"96"	"157883.547058105"	"HCD"	"MS2"	"17.64398"	"12.9"	"100.000"	"89.0058"	"31031"	"31031"	"31009"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.7"	""	"12.3"	""	"14.1"	""	"28.3"	""	"26.7"	"25.4"	""	"1089"	"32"	"37.000"	"30.000"	"0.0338842505274607"	"22"	"0.0003538"	"0.007344"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDELLETSLK"	"[K].tEDELLETSLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"868.48962"	"1735.97197"	"1735.97297"	"-0.57"	"-0.00050"	"13/96"	"13"	"96"	"190289.465087891"	"HCD"	"MS2"	"13.49195"	"17.0"	"100.000"	"89.0432"	"31048"	"31048"	"31030"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.6"	""	"16.3"	""	"16.8"	""	"39.1"	""	"31.6"	"36.0"	""	"1091"	"49"	"37.000"	"30.000"	"0.000639432571906504"	"24"	"0"	"7.655E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDELLETSLK"	"[K].tEDELLETSLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"868.48962"	"1735.97197"	"1735.97297"	"-0.57"	"-0.00050"	"12/96"	"12"	"96"	"150600.171386719"	"HCD"	"MS2"	"0"	"13.3"	"100.000"	"89.5686"	"31249"	"31249"	"31232"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.2"	""	"12.2"	""	"16.2"	""	"20.6"	""	"24.2"	"31.6"	""	"1091"	"40"	"37.000"	"30.000"	"0.00600889693354842"	"21"	"0"	"0.001296"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDELLETSLK"	"[K].tEDELLETSLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"579.32886"	"1735.97202"	"1735.97297"	"-0.55"	"-0.00032"	"13/96"	"13"	"96"	"5082860.94604492"	"HCD"	"MS2"	"4.354873"	"124.5"	"100.000"	"89.3430"	"31163"	"31163"	"31154"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"149.6"	""	"117.6"	""	"152.0"	""	"246.0"	"3.0"	"250.5"	"263.7"	""	"1091"	"40"	"37.000"	"30.000"	"0.00528195570590511"	"27"	"0"	"0.0003111"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDELLETSLK"	"[K].tEDELLETSLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"868.48969"	"1735.97209"	"1735.97297"	"-0.50"	"-0.00044"	"10/96"	"10"	"96"	"103363.140014648"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"89.6179"	"31270"	"31270"	"31250"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.7"	""	"8.6"	""	"10.7"	""	"20.2"	""	"18.4"	"21.4"	""	"1091"	"38"	"37.000"	"30.000"	"0.00947970352082783"	"23"	"0.0002479"	"0.005474"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDELLETSLK"	"[K].tEDELLETSLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.6279"	"0.0000"	"1"	"1"	"1"	"579.32898"	"1735.97239"	"1735.97297"	"-0.34"	"-0.00019"	"13/96"	"13"	"96"	"4815254.46807861"	"HCD"	"MS2"	"4.741437"	"114.2"	"100.000"	"89.2055"	"31109"	"31109"	"31097"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"137.6"	""	"110.0"	""	"130.8"	""	"234.6"	"0.8"	"226.7"	"243.9"	""	"1091"	"43"	"37.000"	"30.000"	"0.00251648736922687"	""	"0"	"0.0002628"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDELLETSLK"	"[K].tEDELLETSLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"579.32910"	"1735.97275"	"1735.97297"	"-0.12"	"-0.00007"	"12/96"	"12"	"96"	"1536034.04852295"	"HCD"	"MS2"	"7.893829"	"43.0"	"100.000"	"89.0758"	"31060"	"31060"	"31051"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.6"	""	"41.5"	""	"54.6"	""	"79.4"	""	"86.6"	"92.6"	""	"1078"	"39"	"37.000"	"30.000"	"0.00754377566866641"	"30"	"0"	"0.0002295"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDELLETSLK"	"[K].tEDELLETSLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8133"	"0.0000"	"1"	"1"	"1"	"868.49023"	"1735.97319"	"1735.97297"	"0.13"	"0.00011"	"18/96"	"18"	"96"	"1192025.74603271"	"HCD"	"MS2"	"0"	"104.6"	"100.000"	"89.3264"	"31156"	"31156"	"31147"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"118.3"	""	"106.0"	""	"125.9"	""	"207.9"	""	"204.4"	"234.5"	""	"1084"	"75"	"37.000"	"30.000"	"1.79060291241954E-06"	""	"0"	"2.936E-06"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDELLETSLK"	"[K].tEDELLETSLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"868.49042"	"1735.97356"	"1735.97297"	"0.34"	"0.00030"	"18/96"	"18"	"96"	"1212928.70843506"	"HCD"	"MS2"	"0"	"106.5"	"100.000"	"89.2840"	"31139"	"31139"	"31128"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"120.2"	""	"102.3"	""	"125.6"	""	"225.2"	""	"211.8"	"234.5"	""	"1074"	"72"	"37.000"	"30.000"	"3.16209042925951E-06"	""	"0"	"8.099E-07"	"1.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGTQIENIDEDFR"	"[K].aGTQIENIDEDFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"868.93481"	"1736.86235"	"1736.86526"	"-1.67"	"-0.00145"	"4/130"	"4"	"130"	"104915.366760254"	"HCD"	"MS2"	"100"	"5.2"	"100.000"	"78.6789"	"26948"	"26948"	"26922"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.9"	""	"4.3"	""	"3.6"	""	"10.7"	""	"14.8"	"9.3"	""	"758"	"4"	"35.000"	"28.000"	"15.7993496335257"	"13"	"0.005427"	"0.06243"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGDDLDPNYVLSSR"	"[K].gGDDLDPNYVLSSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"868.93488"	"1736.86247"	"1736.86526"	"-1.60"	"-0.00139"	"6/136"	"6"	"136"	"257735.61517334"	"HCD"	"MS2"	"0"	"14.5"	"100.000"	"77.1576"	"26343"	"26343"	"26317"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.7"	""	"8.2"	""	"5.1"	""	"6.5"	""	"5.0"	"81.3"	""	"758"	"37"	"35.000"	"28.000"	"0.00710622918557551"	"19"	"0"	"0.001004"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGDDLDPNYVLSSR"	"[K].gGDDLDPNYVLSSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"868.93500"	"1736.86272"	"1736.86526"	"-1.46"	"-0.00127"	"5/136"	"5"	"136"	"391220.320800781"	"HCD"	"MS2"	"0"	"21.5"	"100.000"	"77.4740"	"26471"	"26471"	"26451"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.8"	""	"14.9"	""	"16.1"	""	"13.3"	""	"16.3"	"100.5"	""	"755"	"30"	"35.000"	"28.000"	"0.0349878258325704"	"20"	"0.0001301"	"0.004335"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGDDLDPNYVLSSR"	"[K].gGDDLDPNYVLSSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"868.93524"	"1736.86321"	"1736.86526"	"-1.18"	"-0.00103"	"4/136"	"4"	"136"	"139985.332885742"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"77.2006"	"26350"	"26350"	"26329"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.8"	""	"3.6"	""	"5.9"	""	"1.7"	""	"5.7"	"41.8"	""	"762"	"22"	"35.000"	"28.000"	"0.267254468698009"	"16"	"0.0008629"	"0.01094"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGDDLDPNYVLSSR"	"[K].gGDDLDPNYVLSSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"868.93549"	"1736.86370"	"1736.86526"	"-0.90"	"-0.00078"	"6/136"	"6"	"136"	"393082.237670898"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"77.5239"	"26481"	"26481"	"26461"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.4"	""	"11.5"	""	"12.9"	""	"11.8"	""	"14.1"	"125.4"	""	"761"	"40"	"35.000"	"28.000"	"0.00365051940291812"	"19"	"0"	"0.0001357"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEMEVQDAELK"	"[K].sEMEVQDAELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"868.95947"	"1736.91167"	"1736.91407"	"-1.38"	"-0.00120"	"12/106"	"12"	"106"	"209995.873718262"	"HCD"	"MS2"	"100"	"20.1"	"100.000"	"66.3982"	"21975"	"21975"	"21949"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.4"	""	"22.4"	""	"27.2"	""	"23.0"	""	"56.2"	"41.3"	""	"1123"	"32"	"37.000"	"30.000"	"0.0395685158225053"	"18"	"0"	"0.0008258"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEMEVQDAELK"	"[K].sEMEVQDAELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"579.64276"	"1736.91373"	"1736.91407"	"-0.20"	"-0.00011"	"6/106"	"6"	"106"	"859771.126586914"	"HCD"	"MS2"	"29.29105"	"31.0"	"100.000"	"66.4674"	"22003"	"22003"	"21981"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.7"	""	"38.7"	""	"38.8"	""	"38.1"	""	"62.6"	"73.0"	""	"1125"	"39"	"37.000"	"30.000"	"0.0063991534827568"	"20"	"0"	"0.0001604"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEMEVQDAELK"	"[K].sEMEVQDAELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"579.64276"	"1736.91373"	"1736.91407"	"-0.20"	"-0.00011"	"10/106"	"10"	"106"	"986929.835449219"	"HCD"	"MS2"	"36.51535"	"30.8"	"100.000"	"66.4549"	"21983"	"21983"	"21957"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.4"	""	"31.7"	""	"42.5"	""	"45.2"	""	"57.9"	"69.7"	""	"1125"	"36"	"37.000"	"30.000"	"0.0132166846172717"	"22"	"0"	"0.0006298"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEMEVQDAELK"	"[K].sEMEVQDAELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"0.8852"	"0.0000"	"1"	"1"	"1"	"868.96051"	"1736.91374"	"1736.91407"	"-0.19"	"-0.00016"	"9/106"	"9"	"106"	"224413.678039551"	"HCD"	"MS2"	"15.10486"	"21.7"	"100.000"	"66.4941"	"21999"	"21999"	"21973"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.2"	""	"22.2"	""	"23.0"	""	"29.0"	""	"53.1"	"46.5"	""	"1124"	"61"	"37.000"	"30.000"	"4.58919292703528E-05"	"23"	"0"	"7.074E-05"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQLREPVLNDELPGR"	"[R].TQLREPVLNDELPGR.[I]"	""	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"1"	"4"	"4"	"0.7143"	"0.0000"	"1"	"1"	"1"	"434.98822"	"1736.93105"	"1736.92897"	"1.20"	"0.00052"	"4/158"	"4"	"158"	"4370318.394104"	"HCD"	"MS2"	"10.13812"	"52.3"	"100.000"	"33.7213"	"8724"	"8724"	"8702"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"83.7"	""	"83.3"	""	"89.9"	""	"64.7"	"1.4"	"84.7"	"86.4"	"NoQuanLabels"	"1166"	"14"	"37.000"	"30.000"	"2.55075387307261"	"17"	"0.002795"	"0.02648"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPTDTTALAEDMTR"	"[R].sPTDTTALAEDMTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZFJ3"	"SH3 domain-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Sh3bp1 PE=1 SV=1"	"D3ZFJ3"	"SH3 domain-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Sh3bp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"869.42780"	"1737.84831"	"1737.85264"	"-2.49"	"-0.00217"	"5/128"	"5"	"128"	"63629.6782836914"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"71.9686"	"24231"	"24231"	"24206"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.0"	""	"4.2"	""	"3.7"	""	"4.2"	""	"8.4"	"5.7"	""	"663"	"6"	"35.000"	"28.000"	"7.98883649609606"	"13"	"0.006739"	"0.07632"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGASEEETNLSK"	"[K].dGASEEETNLSk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.7593"	"0.0000"	"1"	"1"	"1"	"579.96655"	"1737.88510"	"1737.89069"	"-3.22"	"-0.00186"	"8/114"	"8"	"114"	"6325723.72924805"	"HCD"	"MS2"	"8.471304"	"170.4"	"100.000"	"43.5364"	"12711"	"12711"	"12692"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"249.7"	""	"151.4"	""	"166.1"	""	"350.2"	"1.7"	"343.6"	"354.8"	""	"952"	"54"	"36.000"	"29.000"	"0.000198887254523792"	"29"	"0"	"3.826E-05"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGASEEETNLSK"	"[K].dGASEEETNLSk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"579.96716"	"1737.88694"	"1737.89069"	"-2.16"	"-0.00125"	"9/114"	"9"	"114"	"5822698.22619629"	"HCD"	"MS2"	"20.63445"	"156.9"	"100.000"	"43.6313"	"12739"	"12739"	"12721"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"229.5"	""	"153.3"	""	"166.0"	""	"313.6"	"3.6"	"305.2"	"317.3"	""	"950"	"42"	"36.000"	"29.000"	"0.00301782192629578"	"27"	"0"	"0.0001015"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGASEEETNLSK"	"[K].dGASEEETNLSk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.9571"	"0.0000"	"1"	"1"	"1"	"869.44794"	"1737.88860"	"1737.89069"	"-1.21"	"-0.00105"	"10/114"	"10"	"114"	"952948.707580566"	"HCD"	"MS2"	"0"	"93.6"	"100.000"	"43.6382"	"12742"	"12742"	"12721"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"134.8"	""	"68.9"	""	"76.5"	""	"221.5"	"0.7"	"194.9"	"192.1"	""	"969"	"70"	"36.000"	"29.000"	"4.87858393558699E-06"	"20"	"0"	"3.059E-07"	"1.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGASEEETNLSK"	"[K].dGASEEETNLSk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"869.44806"	"1737.88884"	"1737.89069"	"-1.07"	"-0.00093"	"11/114"	"11"	"114"	"166759.43737793"	"HCD"	"MS2"	"0"	"15.6"	"100.000"	"43.7496"	"12796"	"12796"	"12776"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.8"	""	"13.5"	""	"16.4"	""	"35.7"	""	"25.9"	"32.2"	""	"970"	"25"	"36.000"	"29.000"	"0.148163673990952"	"20"	"0.000936"	"0.01166"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGASEEETNLSK"	"[K].dGASEEETNLSk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.9221"	"0.0000"	"1"	"1"	"1"	"869.44861"	"1737.88994"	"1737.89069"	"-0.43"	"-0.00038"	"10/114"	"10"	"114"	"446617.158813477"	"HCD"	"MS2"	"0"	"43.6"	"100.000"	"43.4471"	"12675"	"12675"	"12649"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"72.5"	""	"35.7"	""	"40.3"	""	"88.8"	"0.9"	"90.4"	"85.4"	""	"977"	"77"	"36.000"	"29.000"	"1.04439448072184E-06"	"23"	"0"	"8.793E-07"	"1.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFSDNQLQEGK"	"[R].nFSDNQLQEGk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"579.97638"	"1737.91458"	"1737.91718"	"-1.50"	"-0.00087"	"12/112"	"12"	"112"	"1142314.60827637"	"HCD"	"MS2"	"31.48591"	"39.7"	"100.000"	"56.4901"	"17982"	"17982"	"17958"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.0"	""	"41.4"	""	"39.8"	""	"75.5"	"0.4"	"82.7"	"80.8"	""	"1129"	"38"	"37.000"	"30.000"	"0.00864298872119506"	"19"	"0"	"0.000536"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFSDNQLQEGK"	"[R].nFSDNQLQEGk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"3"	"3"	"0.9556"	"0.0000"	"1"	"1"	"1"	"579.97662"	"1737.91532"	"1737.91718"	"-1.07"	"-0.00062"	"12/112"	"12"	"112"	"4034046.65350342"	"HCD"	"MS2"	"9.631351"	"106.3"	"100.000"	"56.1791"	"17855"	"17855"	"17837"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"170.0"	""	"104.3"	""	"112.3"	""	"226.4"	"0.4"	"200.4"	"193.2"	""	"1134"	"45"	"37.000"	"30.000"	"0.00165799439823717"	"18"	"0"	"0.0003498"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFSDNQLQEGK"	"[R].nFSDNQLQEGk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"869.46143"	"1737.91557"	"1737.91718"	"-0.93"	"-0.00080"	"12/112"	"12"	"112"	"358825.346862793"	"HCD"	"MS2"	"0"	"36.8"	"100.000"	"56.2687"	"17878"	"17878"	"17851"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"70.5"	""	"37.6"	""	"41.2"	""	"65.7"	""	"67.6"	"66.3"	""	"1123"	"30"	"37.000"	"30.000"	"0.0506232193765745"	"14"	"0"	"0.002621"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFSDNQLQEGK"	"[R].nFSDNQLQEGk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"869.46161"	"1737.91594"	"1737.91718"	"-0.71"	"-0.00062"	"12/112"	"12"	"112"	"156567.868103027"	"HCD"	"MS2"	"0"	"14.4"	"100.000"	"56.4924"	"17983"	"17983"	"17958"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.2"	""	"13.1"	""	"16.6"	""	"27.1"	""	"29.0"	"31.0"	""	"1125"	"27"	"37.000"	"30.000"	"0.107429245794351"	"16"	"0.0002479"	"0.005861"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFSDNQLQEGK"	"[R].nFSDNQLQEGk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"3"	"3"	"0.9750"	"0.0000"	"1"	"1"	"1"	"579.97687"	"1737.91605"	"1737.91718"	"-0.65"	"-0.00038"	"12/112"	"12"	"112"	"982372.449462891"	"HCD"	"MS2"	"29.09139"	"36.8"	"100.000"	"56.6696"	"18041"	"18041"	"18020"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.1"	""	"37.0"	""	"40.4"	""	"67.8"	"0.8"	"71.9"	"79.6"	""	"1126"	"40"	"37.000"	"30.000"	"0.00627347822412143"	"16"	"0"	"0.0003936"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFSDNQLQEGK"	"[R].nFSDNQLQEGk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"3"	"3"	"0.9348"	"0.0000"	"1"	"1"	"1"	"579.97693"	"1737.91623"	"1737.91718"	"-0.55"	"-0.00032"	"12/112"	"12"	"112"	"4184895.04534912"	"HCD"	"MS2"	"7.450725"	"114.3"	"100.000"	"56.3631"	"17916"	"17916"	"17899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"179.8"	""	"107.3"	""	"128.2"	""	"226.0"	"1.7"	"218.5"	"222.5"	""	"1123"	"46"	"37.000"	"30.000"	"0.00127746720737852"	"18"	"0"	"0.0001636"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFSDNQLQEGK"	"[R].nFSDNQLQEGk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"869.46179"	"1737.91631"	"1737.91718"	"-0.50"	"-0.00044"	"15/112"	"15"	"112"	"366022.894042969"	"HCD"	"MS2"	"0"	"37.6"	"100.000"	"56.5913"	"18009"	"18009"	"17988"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"63.5"	""	"33.3"	""	"38.5"	""	"73.1"	"1.5"	"72.1"	"74.2"	""	"1122"	"49"	"37.000"	"30.000"	"0.000642632760150946"	"19"	"0"	"0.001287"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFSDNQLQEGK"	"[R].nFSDNQLQEGk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.9385"	"0.0000"	"1"	"1"	"1"	"869.46246"	"1737.91765"	"1737.91718"	"0.27"	"0.00023"	"17/112"	"17"	"112"	"823255.300170898"	"HCD"	"MS2"	"0"	"85.0"	"100.000"	"56.1906"	"17860"	"17860"	"17837"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"134.5"	""	"82.5"	""	"83.0"	""	"178.6"	"1.4"	"165.5"	"161.0"	""	"1129"	"65"	"37.000"	"30.000"	"1.6355504552574E-05"	"20"	"0"	"2.301E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGQMTDQVADLR"	"[K].mLGQmTDQVADLR.[A]"	"N-Term(TMT6plex); M1(Oxidation); M5(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"869.93658"	"1738.86589"	"1738.86652"	"-0.36"	"-0.00031"	"11/124"	"11"	"124"	"314518.415344238"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"58.3878"	"18741"	"18741"	"18719"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.7"	""	"11.9"	""	"14.6"	""	"35.5"	""	"21.0"	"20.1"	""	"807"	"56"	"36.000"	"29.000"	"9.11682333284165E-05"	"18"	"0.0003538"	"0.006483"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGQMTDQVADLR"	"[K].mLGQmTDQVADLR.[A]"	"N-Term(TMT6plex); M1(Oxidation); M5(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"869.93768"	"1738.86809"	"1738.86652"	"0.90"	"0.00078"	"10/124"	"10"	"124"	"314807.014587402"	"HCD"	"MS2"	"0"	"13.5"	"100.000"	"58.1947"	"18677"	"18677"	"18655"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.9"	""	"16.8"	""	"15.9"	""	"39.1"	""	"18.6"	"21.8"	""	"819"	"39"	"36.000"	"29.000"	"0.00484455517069454"	"17"	"0.005874"	"0.06662"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDGVYEGVAIGGDR"	"[R].tTDGVYEGVAIGGDR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"580.29681"	"1738.87589"	"1738.88091"	"-2.89"	"-0.00167"	"13/138"	"13"	"138"	"1064409.60015869"	"HCD"	"MS2"	"51.39946"	"24.1"	"100.000"	"64.5173"	"21214"	"21214"	"21183"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.9"	""	"22.0"	""	"27.1"	""	"37.6"	""	"48.9"	"58.3"	""	"887"	"27"	"36.000"	"29.000"	"0.0905510778460936"	"19"	"0"	"0.0009429"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDGVYEGVAIGGDR"	"[R].tTDGVYEGVAIGGDR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"580.29700"	"1738.87644"	"1738.88091"	"-2.57"	"-0.00149"	"14/138"	"14"	"138"	"1195905.059021"	"HCD"	"MS2"	"37.32429"	"23.9"	"100.000"	"64.6432"	"21251"	"21251"	"21223"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.6"	""	"29.0"	""	"28.8"	""	"38.5"	""	"45.8"	"53.4"	""	"898"	"30"	"36.000"	"29.000"	"0.042780547764662"	"19"	"0"	"0.0001028"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDGVYEGVAIGGDR"	"[R].tTDGVYEGVAIGGDR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"580.29749"	"1738.87790"	"1738.88091"	"-1.73"	"-0.00100"	"17/138"	"17"	"138"	"821055.011413574"	"HCD"	"MS2"	"10.02537"	"16.1"	"100.000"	"64.8247"	"21335"	"21335"	"21310"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.6"	""	"24.1"	""	"20.6"	""	"25.4"	""	"23.1"	"42.4"	""	"909"	"34"	"36.000"	"29.000"	"0.0171606560775602"	"17"	"0"	"1.422E-05"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLDNNLATEAYER"	"[R].tLDNNLATEAYER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O54874"	"Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus OX=10116 GN=Cdc42bpa PE=1 SV=1"	"O54874"	"Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus OX=10116 GN=Cdc42bpa PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"869.94263"	"1738.87798"	"1738.88091"	"-1.69"	"-0.00147"	"5/136"	"5"	"136"	"84953.0571899414"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"66.1397"	"21870"	"21870"	"21844"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.8"	""	"6.6"	""	"6.0"	""	"12.1"	""	"14.3"	"13.0"	""	"908"	"24"	"36.000"	"29.000"	"0.162575782444597"	"16"	"0.001036"	"0.01363"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDGVYEGVAIGGDR"	"[R].tTDGVYEGVAIGGDR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"869.94263"	"1738.87798"	"1738.88091"	"-1.69"	"-0.00147"	"11/138"	"11"	"138"	"452432.999938965"	"HCD"	"MS2"	"24.16969"	"26.7"	"100.000"	"64.5542"	"21229"	"21229"	"21199"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.7"	"2.1"	"33.5"	""	"30.5"	""	"44.3"	""	"49.3"	"54.6"	""	"908"	"42"	"36.000"	"29.000"	"0.00309069288846959"	"18"	"0"	"1.799E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLDNNLATEAYER"	"[R].tLDNNLATEAYER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O54874"	"Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus OX=10116 GN=Cdc42bpa PE=1 SV=1"	"O54874"	"Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus OX=10116 GN=Cdc42bpa PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"869.94391"	"1738.88054"	"1738.88091"	"-0.21"	"-0.00018"	"4/136"	"4"	"136"	"96967.228515625"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"66.2266"	"21890"	"21890"	"21864"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.6"	""	"12.1"	""	"7.4"	""	"13.6"	""	"12.4"	"13.2"	""	"925"	"11"	"36.000"	"29.000"	"3.28179717683067"	"13"	"0.008522"	"0.1058"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDGVYEGVAIGGDR"	"[R].tTDGVYEGVAIGGDR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.9683"	"0.0000"	"1"	"1"	"1"	"869.94391"	"1738.88054"	"1738.88091"	"-0.21"	"-0.00018"	"18/138"	"18"	"138"	"268827.903991699"	"HCD"	"MS2"	"0"	"16.4"	"100.000"	"64.9127"	"21355"	"21355"	"21335"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.8"	""	"20.9"	""	"21.9"	""	"27.1"	""	"31.6"	"32.1"	""	"925"	"63"	"36.000"	"29.000"	"2.33405850123132E-05"	"18"	"0"	"6.717E-06"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDGVYEGVAIGGDR"	"[R].tTDGVYEGVAIGGDR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"869.94427"	"1738.88127"	"1738.88091"	"0.21"	"0.00018"	"8/138"	"8"	"138"	"199727.005981445"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"64.8621"	"21350"	"21350"	"21326"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.8"	""	"19.5"	""	"17.9"	""	"19.2"	""	"23.6"	"23.2"	""	"931"	"39"	"36.000"	"29.000"	"0.00584681948099965"	"23"	"0"	"0.002516"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDGVYEGVAIGGDR"	"[R].tTDGVYEGVAIGGDR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"869.94458"	"1738.88188"	"1738.88091"	"0.56"	"0.00049"	"8/138"	"8"	"138"	"258575.367126465"	"HCD"	"MS2"	"0"	"16.3"	"100.000"	"64.6108"	"21238"	"21238"	"21207"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.2"	""	"15.5"	""	"26.6"	""	"22.9"	""	"33.5"	"33.5"	""	"935"	"60"	"36.000"	"29.000"	"4.195479614291E-05"	"21"	"0"	"4.517E-06"	"0.978"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQPGPLSLELQIAQDK"	"[K].TQPGPLSLELQIAqDK.[N]"	"Q14(Deamidated)"	"1"	"1"	"Q8CH34"	"Zona pellucida sperm-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Zp4 PE=2 SV=1"	"Q8CH34"	"Zona pellucida sperm-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Zp4 PE=2 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"580.31317"	"1738.92496"	"1738.92216"	"1.61"	"0.00093"	"4/176"	"4"	"176"	"2767749.2824707"	"HCD"	"MS2"	"7.067843"	"22.4"	"100.000"	"60.8835"	"19724"	"19724"	"19702"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.8"	""	"22.8"	""	"25.6"	""	"33.6"	""	"48.3"	"55.0"	"NoQuanLabels"	"1193"	"9"	"37.000"	"30.000"	"7.42352965921631"	"15"	"0.009363"	"0.1222"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQPGPLSLELQIAQDK"	"[K].TQPGPLSLELQIAqDK.[N]"	"Q14(Deamidated)"	"1"	"1"	"Q8CH34"	"Zona pellucida sperm-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Zp4 PE=2 SV=1"	"Q8CH34"	"Zona pellucida sperm-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Zp4 PE=2 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"580.31342"	"1738.92569"	"1738.92216"	"2.03"	"0.00118"	"4/176"	"4"	"176"	"2705909.03186035"	"HCD"	"MS2"	"11.10322"	"24.0"	"100.000"	"60.6931"	"19662"	"19662"	"19641"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.8"	""	"21.5"	""	"35.0"	""	"40.1"	"0.7"	"50.7"	"45.8"	"NoQuanLabels"	"1188"	"9"	"37.000"	"30.000"	"7.24079821761371"	"15"	"0.005874"	"0.06687"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEYYDSVYTER"	"[R].wEYYDSVYTER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"870.40869"	"1739.81011"	"1739.81143"	"-0.76"	"-0.00066"	"4/96"	"4"	"96"	"93612.8704223633"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"88.0629"	"30676"	"30676"	"30660"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.3"	""	"4.5"	""	"2.6"	""	"9.6"	""	"12.2"	"12.9"	""	"454"	"13"	"33.000"	"26.000"	"1.04478242202968"	"13"	"0.009021"	"0.1167"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEYYDSVYTER"	"[R].wEYYDSVYTER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"870.40912"	"1739.81096"	"1739.81143"	"-0.27"	"-0.00024"	"6/96"	"6"	"96"	"201628.729003906"	"HCD"	"MS2"	"0"	"14.6"	"100.000"	"88.3027"	"30762"	"30762"	"30758"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.0"	""	"14.7"	""	"11.2"	""	"27.5"	"0.9"	"36.2"	"35.7"	""	"464"	"32"	"33.000"	"26.000"	"0.0144041615941375"	"15"	"0.001728"	"0.02018"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEYYDSVYTER"	"[R].wEYYDSVYTER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"870.40936"	"1739.81145"	"1739.81143"	"0.01"	"0.00001"	"5/96"	"5"	"96"	"195221.469238281"	"HCD"	"MS2"	"0"	"13.5"	"100.000"	"88.3320"	"30775"	"30775"	"30769"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.2"	""	"15.8"	""	"12.6"	""	"22.9"	""	"35.1"	"33.7"	""	"464"	"26"	"33.000"	"26.000"	"0.0557812169601609"	"14"	"0.002937"	"0.02816"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEYYDSVYTER"	"[R].wEYYDSVYTER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"870.40948"	"1739.81169"	"1739.81143"	"0.15"	"0.00013"	"3/96"	"3"	"96"	"87326.7786865234"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"88.0445"	"30664"	"30664"	"30642"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.8"	""	"5.3"	""	"6.2"	""	"9.6"	""	"15.6"	"13.1"	""	"463"	"1"	"33.000"	"26.000"	"18.3042102381959"	"13"	"0.007627"	"0.09215"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIDSNPYDTDK"	"[K].nIDSNPYDTDk.[M]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"870.44592"	"1739.88457"	"1739.88521"	"-0.37"	"-0.00032"	"13/114"	"13"	"114"	"212737.700439453"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"54.0254"	"16980"	"16980"	"16955"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.8"	""	"21.7"	""	"22.4"	""	"36.9"	""	"40.5"	"35.3"	""	"917"	"40"	"36.000"	"29.000"	"0.00459556951658717"	"17"	"0"	"0.0001991"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIDSNPYDTDK"	"[K].nIDSNPYDTDk.[M]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.8364"	"0.0000"	"1"	"1"	"1"	"870.44696"	"1739.88664"	"1739.88521"	"0.82"	"0.00071"	"7/114"	"7"	"114"	"232443.740234375"	"HCD"	"MS2"	"0"	"21.4"	"100.000"	"54.3020"	"17082"	"17082"	"17056"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.4"	""	"21.4"	""	"22.6"	""	"42.3"	"1.4"	"43.7"	"40.4"	""	"925"	"55"	"36.000"	"29.000"	"0.000132163562631091"	"25"	"0"	"5.841E-05"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTDSQLQEGK"	"[R].eFTDSQLQEGk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.7800"	"0.0000"	"1"	"1"	"1"	"580.64502"	"1739.92051"	"1739.92160"	"-0.63"	"-0.00037"	"11/106"	"11"	"106"	"2519441.04486084"	"HCD"	"MS2"	"4.844896"	"71.7"	"100.000"	"61.3357"	"19924"	"19924"	"19905"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"104.3"	""	"61.2"	""	"72.0"	""	"142.3"	""	"170.7"	"135.9"	""	"1113"	"50"	"37.000"	"30.000"	"0.000524161560464962"	"26"	"0"	"0.0004552"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTDSQLQEGK"	"[R].eFTDSQLQEGk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.8140"	"0.0000"	"1"	"1"	"1"	"580.64502"	"1739.92051"	"1739.92160"	"-0.63"	"-0.00037"	"11/106"	"11"	"106"	"2417050.38275146"	"HCD"	"MS2"	"6.433943"	"69.7"	"100.000"	"61.4915"	"19972"	"19972"	"19953"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.8"	""	"59.8"	""	"62.6"	""	"136.4"	"0.0"	"169.1"	"131.2"	""	"1113"	"43"	"37.000"	"30.000"	"0.00274451221900922"	"23"	"0"	"0.0006669"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTDSQLQEGK"	"[R].eFTDSQLQEGk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"870.46399"	"1739.92070"	"1739.92160"	"-0.52"	"-0.00045"	"15/106"	"15"	"106"	"322496.587341309"	"HCD"	"MS2"	"0"	"31.5"	"100.000"	"61.5796"	"20024"	"20024"	"20001"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.3"	""	"23.2"	""	"28.1"	""	"66.6"	""	"79.1"	"59.2"	""	"1113"	"54"	"37.000"	"30.000"	"0.000230921924726023"	"25"	"0"	"2.884E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTDSQLQEGK"	"[R].eFTDSQLQEGk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"870.46417"	"1739.92107"	"1739.92160"	"-0.31"	"-0.00027"	"16/106"	"16"	"106"	"315250.397033691"	"HCD"	"MS2"	"0"	"31.5"	"100.000"	"61.3994"	"19935"	"19935"	"19905"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.3"	""	"31.0"	""	"24.9"	""	"65.8"	""	"79.3"	"59.1"	""	"1109"	"53"	"37.000"	"30.000"	"0.000285037204802455"	"24"	"0"	"8.186E-06"	"0.922"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTDSQLQEGK"	"[R].eFTDSQLQEGk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"870.46429"	"1739.92131"	"1739.92160"	"-0.17"	"-0.00014"	"10/106"	"10"	"106"	"331296.063842773"	"HCD"	"MS2"	"0"	"33.2"	"100.000"	"61.6964"	"20056"	"20056"	"20033"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.2"	""	"32.8"	""	"31.9"	""	"69.2"	"0.3"	"77.9"	"58.9"	""	"1107"	"60"	"37.000"	"30.000"	"5.6249365150393E-05"	"24"	"0"	"3.121E-06"	"1.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTDSQLQEGK"	"[R].eFTDSQLQEGk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.9714"	"0.0000"	"1"	"1"	"1"	"870.46533"	"1739.92339"	"1739.92160"	"1.03"	"0.00089"	"15/106"	"15"	"106"	"350303.581970215"	"HCD"	"MS2"	"0"	"34.8"	"100.000"	"61.2759"	"19900"	"19900"	"19873"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.4"	""	"27.6"	""	"37.1"	""	"72.3"	""	"86.2"	"59.0"	""	"1131"	"35"	"37.000"	"30.000"	"0.0167661215077602"	"16"	"0"	"0.0004655"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"580.96698"	"1740.88639"	"1740.88786"	"-0.84"	"-0.00049"	"12/96"	"12"	"96"	"3873223.96038818"	"HCD"	"MS2"	"24.00535"	"106.3"	"100.000"	"53.3925"	"16721"	"16721"	"16700"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"199.5"	""	"130.5"	""	"150.7"	""	"125.5"	""	"198.1"	"203.3"	""	"898"	"39"	"36.000"	"29.000"	"0.00571802883376481"	"16"	"0"	"0.0004704"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"580.96716"	"1740.88694"	"1740.88786"	"-0.53"	"-0.00031"	"11/96"	"11"	"96"	"3482337.08081055"	"HCD"	"MS2"	"18.89431"	"102.7"	"100.000"	"53.6670"	"16822"	"16822"	"16801"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"209.2"	""	"124.9"	""	"133.5"	""	"121.4"	""	"199.6"	"190.3"	""	"918"	"33"	"36.000"	"29.000"	"0.0209320944421645"	"15"	"0"	"0.0003521"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"580.96722"	"1740.88712"	"1740.88786"	"-0.42"	"-0.00025"	"12/96"	"12"	"96"	"4002921.62451172"	"HCD"	"MS2"	"7.310659"	"110.2"	"100.000"	"53.6987"	"16846"	"16846"	"16828"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"201.9"	""	"141.4"	""	"157.2"	""	"122.6"	""	"208.3"	"212.4"	""	"917"	"34"	"36.000"	"29.000"	"0.0179200550720817"	"16"	"0"	"0.0003769"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"580.96741"	"1740.88767"	"1740.88786"	"-0.11"	"-0.00006"	"12/96"	"12"	"96"	"2915003.1673584"	"HCD"	"MS2"	"8.362397"	"85.8"	"100.000"	"54.0120"	"16963"	"16963"	"16944"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"155.1"	""	"107.4"	""	"117.5"	""	"97.3"	""	"183.0"	"159.0"	""	"916"	"40"	"36.000"	"29.000"	"0.00469748582223145"	"19"	"0"	"0.000156"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.9574"	"0.0000"	"1"	"1"	"1"	"870.94751"	"1740.88774"	"1740.88786"	"-0.07"	"-0.00006"	"9/96"	"9"	"96"	"1557022.3604126"	"HCD"	"MS2"	"0"	"118.2"	"100.000"	"53.5906"	"16802"	"16802"	"16780"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"259.3"	""	"144.1"	""	"164.2"	""	"114.0"	"1.2"	"222.8"	"212.9"	""	"920"	"47"	"36.000"	"29.000"	"0.000821784284431943"	"17"	"0"	"0.0001856"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"870.94769"	"1740.88811"	"1740.88786"	"0.14"	"0.00013"	"9/96"	"9"	"96"	"287445.224853516"	"HCD"	"MS2"	"0"	"23.9"	"100.000"	"53.5725"	"16784"	"16784"	"16754"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.4"	""	"29.8"	""	"34.4"	""	"25.5"	""	"43.3"	"41.5"	""	"916"	"26"	"36.000"	"29.000"	"0.117183233620278"	"16"	"0.0002479"	"0.00503"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"870.94800"	"1740.88872"	"1740.88786"	"0.50"	"0.00043"	"7/96"	"7"	"96"	"310157.121154785"	"HCD"	"MS2"	"0"	"26.1"	"100.000"	"53.2957"	"16682"	"16682"	"16653"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.9"	""	"35.0"	""	"34.0"	""	"27.6"	""	"54.5"	"47.9"	""	"925"	"21"	"36.000"	"29.000"	"0.390042325465977"	"21"	"0.0003538"	"0.006782"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"870.94800"	"1740.88872"	"1740.88786"	"0.50"	"0.00043"	"9/96"	"9"	"96"	"1256932.38269043"	"HCD"	"MS2"	"0"	"98.9"	"100.000"	"53.9271"	"16929"	"16929"	"16912"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"209.2"	""	"126.1"	""	"131.4"	""	"97.2"	""	"188.8"	"184.0"	""	"925"	"55"	"36.000"	"29.000"	"0.000152795912729527"	"23"	"0"	"0.0001961"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEHPGGEEVLR"	"[K].fLEEHPGGEEVLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"3"	"3"	"0.6774"	"0.0000"	"1"	"1"	"1"	"580.97485"	"1740.91001"	"1740.91181"	"-1.04"	"-0.00060"	"13/110"	"13"	"110"	"1116810.7822876"	"HCD"	"MS2"	"13.29365"	"25.5"	"100.000"	"65.7411"	"21707"	"21707"	"21686"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.1"	""	"29.3"	""	"33.6"	""	"42.1"	""	"53.3"	"54.0"	""	"1038"	"31"	"37.000"	"30.000"	"0.0395519006203189"	"24"	"0"	"0.0001381"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"FLEEHPGGEEVLR"	"[K].fLEEHPGGEEVLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"870.95886"	"1740.91045"	"1740.91181"	"-0.79"	"-0.00068"	"5/110"	"5"	"110"	"118508.844360352"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"65.4176"	"21560"	"21560"	"21533"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.5"	""	"8.0"	""	"9.7"	""	"10.9"	""	"11.1"	"14.0"	""	"1037"	"13"	"37.000"	"30.000"	"2.61065065656528"	"15"	"0.0003538"	"0.00675"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEHPGGEEVLR"	"[K].fLEEHPGGEEVLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"3"	"3"	"0.4211"	"0.0000"	"1"	"1"	"1"	"580.97504"	"1740.91056"	"1740.91181"	"-0.72"	"-0.00042"	"9/110"	"9"	"110"	"600916.722595215"	"HCD"	"MS2"	"31.96366"	"20.0"	"100.000"	"65.9246"	"21767"	"21767"	"21737"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.9"	""	"19.3"	""	"31.1"	""	"29.2"	""	"39.1"	"43.3"	""	"1035"	"19"	"37.000"	"30.000"	"0.674388807849064"	"25"	"0"	"0.001087"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEHPGGEEVLR"	"[K].fLEEHPGGEEVLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"580.97504"	"1740.91056"	"1740.91181"	"-0.72"	"-0.00042"	"12/110"	"12"	"110"	"1569535.73522949"	"HCD"	"MS2"	"5.933608"	"29.5"	"100.000"	"65.2125"	"21476"	"21476"	"21454"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.1"	""	"35.5"	""	"40.6"	""	"49.8"	""	"56.3"	"65.4"	""	"1035"	"40"	"37.000"	"30.000"	"0.00486306813217199"	"25"	"0"	"5.277E-05"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEHPGGEEVLR"	"[K].fLEEHPGGEEVLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"3"	"3"	"0.5333"	"0.0000"	"1"	"1"	"1"	"580.97510"	"1740.91074"	"1740.91181"	"-0.62"	"-0.00036"	"12/110"	"12"	"110"	"1449395.28112793"	"HCD"	"MS2"	"0"	"26.1"	"100.000"	"65.1436"	"21464"	"21464"	"21437"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.3"	""	"34.5"	""	"40.0"	""	"36.2"	""	"53.3"	"51.9"	""	"1035"	"30"	"37.000"	"30.000"	"0.0566122419545808"	"29"	"0"	"0.0003031"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEHPGGEEVLR"	"[K].fLEEHPGGEEVLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"3"	"3"	"0.3836"	"0.0000"	"1"	"1"	"1"	"580.97528"	"1740.91129"	"1740.91181"	"-0.30"	"-0.00018"	"10/110"	"10"	"110"	"8879992.40936279"	"HCD"	"MS2"	"2.348325"	"97.4"	"100.000"	"65.5100"	"21598"	"21598"	"21581"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"137.7"	""	"118.1"	""	"124.2"	""	"163.3"	""	"176.5"	"203.7"	""	"1028"	"73"	"37.000"	"30.000"	"2.70996148771331E-06"	""	"0"	"1.148E-06"	"1.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEHPGGEEVLR"	"[K].fLEEHPGGEEVLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"3"	"3"	"0.4615"	"0.0000"	"1"	"1"	"1"	"580.97546"	"1740.91184"	"1740.91181"	"0.01"	"0.00001"	"10/110"	"10"	"110"	"10263897.2927856"	"HCD"	"MS2"	"2.390062"	"110.0"	"100.000"	"65.4230"	"21578"	"21578"	"21563"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"154.1"	""	"138.3"	""	"138.0"	""	"181.8"	""	"204.6"	"228.0"	""	"1035"	"78"	"37.000"	"30.000"	"7.68971694883525E-07"	""	"0"	"1.774E-06"	"1.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEHPGGEEVLR"	"[K].fLEEHPGGEEVLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"870.95996"	"1740.91265"	"1740.91181"	"0.48"	"0.00042"	"10/110"	"10"	"110"	"128356.059936523"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"65.3399"	"21544"	"21544"	"21517"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.4"	""	"10.7"	""	"5.0"	""	"10.6"	""	"15.5"	"15.3"	""	"1036"	"32"	"37.000"	"30.000"	"0.0353451443565385"	""	"0"	"0.0007681"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGIDLPADTVEGLR"	"[K].rGIDLPADTVEGLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"580.99774"	"1740.97867"	"1740.98056"	"-1.09"	"-0.00063"	"9/144"	"9"	"144"	"419243.908508301"	"HCD"	"MS2"	"53.75885"	"11.8"	"100.000"	"72.1970"	"24324"	"24324"	"24298"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.8"	""	"15.5"	""	"17.4"	""	"22.0"	""	"18.9"	"27.6"	""	"955"	"40"	"36.000"	"29.000"	"0.00506959628562391"	"15"	"0"	"0.0008749"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGAEDTDGIDMAYR"	"[K].vGAEDTDGIDMAYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"871.41626"	"1741.82524"	"1741.82643"	"-0.68"	"-0.00059"	"6/116"	"6"	"116"	"185920.265930176"	"HCD"	"MS2"	"16.00617"	"13.7"	"100.000"	"71.4660"	"24027"	"24027"	"24000"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.7"	""	"19.7"	""	"20.1"	""	"15.7"	""	"28.5"	"24.3"	""	"516"	"21"	"34.000"	"27.000"	"0.183493086522559"	"14"	"0"	"0.003592"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGAEDTDGIDMAYR"	"[K].vGAEDTDGIDMAYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"871.41675"	"1741.82622"	"1741.82643"	"-0.12"	"-0.00011"	"5/116"	"5"	"116"	"181593.669799805"	"HCD"	"MS2"	"43.84856"	"11.9"	"100.000"	"71.3054"	"23975"	"23975"	"23951"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.9"	""	"17.5"	""	"19.7"	""	"13.6"	""	"18.0"	"22.0"	""	"521"	"28"	"34.000"	"27.000"	"0.045899476009023"	"14"	"0"	"0.002254"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPPEAIWADDVDR"	"[R].ePPEAIWADDVDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P12928"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2"	"P12928"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"871.43213"	"1741.85698"	"1741.85944"	"-1.41"	"-0.00123"	"4/118"	"4"	"118"	"58395.7061767578"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"85.9665"	"29848"	"29848"	"29828"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.7"	""	"2.8"	""	"2.8"	""	"3.1"	""	"3.0"	"5.7"	""	"729"	"8"	"35.000"	"28.000"	"6.1616571958397"	"13"	"0.008777"	"0.1142"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDIPLNLSR"	"[R].gVVDSEDIPLNLSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"871.97681"	"1742.94634"	"1742.94859"	"-1.30"	"-0.00113"	"10/128"	"10"	"128"	"3114640.66564941"	"HCD"	"MS2"	"0"	"128.1"	"100.000"	"90.8924"	"31768"	"31768"	"31754"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"243.1"	""	"167.0"	""	"176.0"	""	"187.6"	"0.5"	"211.6"	"225.2"	""	"1015"	"74"	"37.000"	"30.000"	"1.94283557233287E-06"	"27"	"0"	"2.235E-08"	"1.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDLPLNISR"	"[R].gVVDSEDLPLNISR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"871.97681"	"1742.94634"	"1742.94859"	"-1.30"	"-0.00113"	"10/128"	"10"	"128"	"3114640.66564941"	"HCD"	"MS2"	"0"	"128.1"	"100.000"	"90.8924"	"31768"	"31768"	"31754"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"243.1"	""	"167.0"	""	"176.0"	""	"187.6"	"0.5"	"211.6"	"225.2"	""	"1015"	"74"	"37.000"	"30.000"	"1.94283557233287E-06"	"27"	"0"	"2.235E-08"	"1.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDIPLNLSR"	"[R].gVVDSEDIPLNLSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"871.97711"	"1742.94695"	"1742.94859"	"-0.95"	"-0.00082"	"13/128"	"13"	"128"	"2723083.79626465"	"HCD"	"MS2"	"0"	"109.6"	"100.000"	"90.8245"	"31737"	"31737"	"31724"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"198.6"	""	"130.3"	""	"158.2"	""	"165.0"	"0.2"	"195.9"	"188.2"	""	"1012"	"70"	"37.000"	"30.000"	"5.31068468898074E-06"	"27"	"0"	"2.501E-08"	"1.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDLPLNISR"	"[R].gVVDSEDLPLNISR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"871.97711"	"1742.94695"	"1742.94859"	"-0.95"	"-0.00082"	"13/128"	"13"	"128"	"2723083.79626465"	"HCD"	"MS2"	"0"	"109.6"	"100.000"	"90.8245"	"31737"	"31737"	"31724"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"198.6"	""	"130.3"	""	"158.2"	""	"165.0"	"0.2"	"195.9"	"188.2"	""	"1012"	"70"	"37.000"	"30.000"	"5.31068468898074E-06"	"27"	"0"	"2.501E-08"	"1.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDIPLNLSR"	"[R].gVVDSEDIPLNLSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"871.97729"	"1742.94731"	"1742.94859"	"-0.73"	"-0.00064"	"6/128"	"6"	"128"	"125416.243774414"	"HCD"	"MS2"	"30.81172"	"7.6"	"100.000"	"90.5530"	"31629"	"31629"	"31613"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.2"	""	"8.1"	""	"6.4"	""	"13.4"	""	"14.5"	"15.7"	""	"996"	"26"	"36.000"	"29.000"	"0.120845182735104"	"24"	"0"	"0.001401"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDLPLNISR"	"[R].gVVDSEDLPLNISR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"871.97729"	"1742.94731"	"1742.94859"	"-0.73"	"-0.00064"	"6/128"	"6"	"128"	"125416.243774414"	"HCD"	"MS2"	"30.81172"	"7.6"	"100.000"	"90.5530"	"31629"	"31629"	"31613"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.2"	""	"8.1"	""	"6.4"	""	"13.4"	""	"14.5"	"15.7"	""	"996"	"26"	"36.000"	"29.000"	"0.120845182735104"	"24"	"0"	"0.001401"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDIPLNLSR"	"[R].gVVDSEDIPLNLSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"871.97729"	"1742.94731"	"1742.94859"	"-0.73"	"-0.00064"	"7/128"	"7"	"128"	"246065.79107666"	"HCD"	"MS2"	"40.53467"	"16.9"	"100.000"	"90.6161"	"31658"	"31658"	"31633"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.8"	""	"19.6"	""	"19.9"	""	"25.8"	""	"40.0"	"27.5"	""	"996"	"28"	"36.000"	"29.000"	"0.075549108299475"	"16"	"0"	"0.0005792"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDLPLNISR"	"[R].gVVDSEDLPLNISR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"871.97729"	"1742.94731"	"1742.94859"	"-0.73"	"-0.00064"	"7/128"	"7"	"128"	"246065.79107666"	"HCD"	"MS2"	"40.53467"	"16.9"	"100.000"	"90.6161"	"31658"	"31658"	"31633"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.8"	""	"19.6"	""	"19.9"	""	"25.8"	""	"40.0"	"27.5"	""	"996"	"28"	"36.000"	"29.000"	"0.075549108299475"	"16"	"0"	"0.0005792"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDIPLNLSR"	"[R].gVVDSEDIPLNLSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"871.97748"	"1742.94768"	"1742.94859"	"-0.52"	"-0.00046"	"6/128"	"6"	"128"	"148034.571838379"	"HCD"	"MS2"	"26.16589"	"7.7"	"100.000"	"91.3835"	"31952"	"31952"	"31944"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.8"	""	"11.6"	""	"10.4"	""	"10.9"	""	"14.8"	"14.0"	""	"1008"	"22"	"37.000"	"30.000"	"0.343898701847401"	"22"	"0.0008629"	"0.01022"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDLPLNISR"	"[R].gVVDSEDLPLNISR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"871.97748"	"1742.94768"	"1742.94859"	"-0.52"	"-0.00046"	"6/128"	"6"	"128"	"148034.571838379"	"HCD"	"MS2"	"26.16589"	"7.7"	"100.000"	"91.3835"	"31952"	"31952"	"31944"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.8"	""	"11.6"	""	"10.4"	""	"10.9"	""	"14.8"	"14.0"	""	"1008"	"22"	"37.000"	"30.000"	"0.343898701847401"	"22"	"0.0008629"	"0.01022"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDIPLNLSR"	"[R].gVVDSEDIPLNLSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"871.97748"	"1742.94768"	"1742.94859"	"-0.52"	"-0.00046"	"5/128"	"5"	"128"	"131127.710510254"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"91.4406"	"31979"	"31979"	"31970"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.1"	""	"6.8"	""	"9.6"	""	"6.7"	""	"8.2"	"8.4"	""	"1008"	"31"	"37.000"	"30.000"	"0.0414410295573324"	"24"	"0"	"0.001187"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDLPLNISR"	"[R].gVVDSEDLPLNISR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"871.97748"	"1742.94768"	"1742.94859"	"-0.52"	"-0.00046"	"5/128"	"5"	"128"	"131127.710510254"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"91.4406"	"31979"	"31979"	"31970"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.1"	""	"6.8"	""	"9.6"	""	"6.7"	""	"8.2"	"8.4"	""	"1008"	"31"	"37.000"	"30.000"	"0.0414410295573324"	"24"	"0"	"0.001187"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDIPLNLSR"	"[R].gVVDSEDIPLNLSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"871.97766"	"1742.94805"	"1742.94859"	"-0.31"	"-0.00027"	"12/128"	"12"	"128"	"621760.029663086"	"HCD"	"MS2"	"0"	"27.3"	"100.000"	"91.1639"	"31875"	"31875"	"31865"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.2"	""	"35.7"	""	"39.2"	""	"39.7"	"0.4"	"46.2"	"51.2"	""	"995"	"60"	"36.000"	"29.000"	"4.53725392579566E-05"	"26"	"0"	"8.041E-07"	"1.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDLPLNISR"	"[R].gVVDSEDLPLNISR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"871.97766"	"1742.94805"	"1742.94859"	"-0.31"	"-0.00027"	"12/128"	"12"	"128"	"621760.029663086"	"HCD"	"MS2"	"0"	"27.3"	"100.000"	"91.1639"	"31875"	"31875"	"31865"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.2"	""	"35.7"	""	"39.2"	""	"39.7"	"0.4"	"46.2"	"51.2"	""	"995"	"60"	"36.000"	"29.000"	"4.53725392579566E-05"	"26"	"0"	"8.041E-07"	"1.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDIPLNLSR"	"[R].gVVDSEDIPLNLSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"871.97772"	"1742.94817"	"1742.94859"	"-0.24"	"-0.00021"	"17/128"	"17"	"128"	"594831.433776855"	"HCD"	"MS2"	"0"	"26.6"	"100.000"	"91.1077"	"31850"	"31850"	"31837"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.9"	""	"30.8"	""	"36.1"	""	"41.6"	""	"46.9"	"46.9"	""	"995"	"50"	"36.000"	"29.000"	"0.000553086534322592"	"25"	"0"	"1.985E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDLPLNISR"	"[R].gVVDSEDLPLNISR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"871.97772"	"1742.94817"	"1742.94859"	"-0.24"	"-0.00021"	"17/128"	"17"	"128"	"594831.433776855"	"HCD"	"MS2"	"0"	"26.6"	"100.000"	"91.1077"	"31850"	"31850"	"31837"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.9"	""	"30.8"	""	"36.1"	""	"41.6"	""	"46.9"	"46.9"	""	"995"	"50"	"36.000"	"29.000"	"0.000553086534322592"	"25"	"0"	"1.985E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWDDGIIDPVDTR"	"[R].lWDDGIIDPVDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"2"	"2"	"0.9592"	"0.0000"	"1"	"1"	"1"	"872.45862"	"1743.90996"	"1743.91148"	"-0.87"	"-0.00076"	"7/114"	"7"	"114"	"229820.527282715"	"HCD"	"MS2"	"13.65691"	"8.6"	"100.000"	"107.8462"	"37602"	"37602"	"37591"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.6"	""	"12.8"	""	"11.4"	""	"12.3"	""	"16.0"	"16.9"	""	"979"	"49"	"36.000"	"29.000"	"0.000669503260129167"	"17"	"0"	"8.839E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWDDGIIDPVDTR"	"[R].lWDDGIIDPVDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"872.45892"	"1743.91057"	"1743.91148"	"-0.52"	"-0.00046"	"7/114"	"7"	"114"	"207768.920043945"	"HCD"	"MS2"	"20.7"	"7.3"	"100.000"	"107.8960"	"37540"	"37540"	"37528"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.1"	""	"10.7"	""	"11.8"	""	"10.8"	""	"11.3"	"12.6"	""	"987"	"54"	"36.000"	"29.000"	"0.000177536296899359"	"18"	"0"	"5.634E-05"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIVEDWDLMER"	"[R].hGIVEDWDLmER.[F]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"0.8780"	"0.0000"	"1"	"1"	"1"	"582.28845"	"1744.85080"	"1744.85259"	"-1.02"	"-0.00059"	"14/100"	"14"	"100"	"1308329.30065918"	"HCD"	"MS2"	"6.350631"	"24.6"	"100.000"	"67.7260"	"22516"	"22516"	"22502"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.4"	""	"27.6"	""	"27.7"	""	"50.8"	"0.4"	"49.4"	"43.6"	""	"659"	"41"	"35.000"	"28.000"	"0.00238701648844709"	"20"	"0"	"4.492E-05"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIVEDWDLMER"	"[R].hGIVEDWDLmER.[F]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"0.9535"	"0.0000"	"1"	"1"	"1"	"582.28943"	"1744.85373"	"1744.85259"	"0.66"	"0.00038"	"14/100"	"14"	"100"	"1187602.24224854"	"HCD"	"MS2"	"16.5582"	"21.7"	"100.000"	"67.8408"	"22548"	"22548"	"22526"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.3"	""	"22.7"	""	"26.9"	""	"46.9"	""	"38.6"	"38.1"	""	"674"	"43"	"35.000"	"28.000"	"0.0018777159739006"	"17"	"0"	"6.056E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEYDESGPSIVHR"	"[K].qEYDESGPSIVHR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9518"	"0.0000"	"1"	"1"	"1"	"582.62616"	"1745.86393"	"1745.86559"	"-0.95"	"-0.00056"	"13/134"	"13"	"134"	"20825421.3383179"	"HCD"	"MS2"	"5.199304"	"166.1"	"98.045"	"39.3173"	"10992"	"10992"	"10975"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"309.2"	""	"187.1"	""	"182.3"	""	"242.4"	"1.7"	"335.4"	"316.8"	""	"810"	"83"	"36.000"	"29.000"	"1.97449038491871E-07"	"22"	"0"	"4.159E-07"	"1.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEYDESGPSIVHR"	"[K].qEYDESGPSIVHR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9589"	"0.0000"	"1"	"1"	"1"	"873.43573"	"1745.86418"	"1745.86559"	"-0.81"	"-0.00070"	"10/134"	"10"	"134"	"464141.262512207"	"HCD"	"MS2"	"0"	"25.9"	"100.000"	"39.3861"	"11020"	"11020"	"10991"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.7"	""	"28.1"	""	"24.4"	""	"43.5"	""	"47.4"	"50.9"	""	"813"	"73"	"36.000"	"29.000"	"2.10892215824623E-06"	"20"	"0"	"6.561E-06"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEYDESGPSIVHR"	"[K].qEYDESGPSIVHR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9692"	"0.0000"	"1"	"1"	"1"	"873.43585"	"1745.86443"	"1745.86559"	"-0.67"	"-0.00058"	"10/134"	"10"	"134"	"468761.437194824"	"HCD"	"MS2"	"0"	"26.5"	"100.000"	"39.6419"	"11115"	"11115"	"11085"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.5"	""	"28.3"	""	"29.8"	""	"40.4"	"1.0"	"46.5"	"48.0"	""	"814"	"65"	"36.000"	"29.000"	"1.40150421820679E-05"	"19"	"0"	"1.132E-05"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEYDESGPSIVHR"	"[K].qEYDESGPSIVHR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"582.62634"	"1745.86448"	"1745.86559"	"-0.64"	"-0.00037"	"15/134"	"15"	"134"	"24517889.3856201"	"HCD"	"MS2"	"18.41103"	"208.0"	"41.081"	"39.6088"	"11111"	"11111"	"11094"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"400.9"	""	"274.6"	""	"287.7"	""	"336.6"	"3.8"	"333.8"	"328.0"	""	"814"	"56"	"36.000"	"29.000"	"9.74079512856991E-05"	"23"	"0"	"8.2E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEYDESGPSIVHR"	"[K].qEYDESGPSIVHR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9506"	"0.0000"	"1"	"1"	"1"	"582.62665"	"1745.86539"	"1745.86559"	"-0.12"	"-0.00007"	"18/134"	"18"	"134"	"28282096.3162842"	"HCD"	"MS2"	"2.923628"	"131.9"	"59.656"	"39.5709"	"11086"	"11086"	"11070"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"259.1"	""	"132.7"	""	"161.5"	""	"188.6"	"0.6"	"260.6"	"246.2"	""	"808"	"81"	"36.000"	"29.000"	"3.1072869787579E-07"	"22"	"0"	"6.46E-06"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEKPLFHYDEAR"	"[M].aEkPLFHYDEAR.[G]"	"N-Term(Prot)(Acetyl); K3(TMT6plex)"	"1"	"1"	"Q6AXY0"	"Glutathione S-transferase A6 OS=Rattus norvegicus OX=10116 GN=Gsta6 PE=1 SV=1"	"Q6AXY0"	"Glutathione S-transferase A6 OS=Rattus norvegicus OX=10116 GN=Gsta6 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"582.97150"	"1746.89994"	"1746.90125"	"-0.75"	"-0.00044"	"9/122"	"9"	"122"	"686201.455078125"	"HCD"	"MS2"	"100"	"24.8"	"100.000"	"60.4105"	"19549"	"19549"	"19528"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.2"	""	"35.0"	""	"38.7"	""	"36.0"	""	"38.4"	"50.8"	""	"984"	"19"	"36.000"	"29.000"	"0.609487920572941"	"14"	"0"	"0.0002646"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEKPLFHYDEAR"	"[M].aEkPLFHYDEAR.[G]"	"N-Term(Prot)(Acetyl); K3(TMT6plex)"	"1"	"1"	"Q6AXY0"	"Glutathione S-transferase A6 OS=Rattus norvegicus OX=10116 GN=Gsta6 PE=1 SV=1"	"Q6AXY0"	"Glutathione S-transferase A6 OS=Rattus norvegicus OX=10116 GN=Gsta6 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"582.97162"	"1746.90030"	"1746.90125"	"-0.54"	"-0.00032"	"6/122"	"6"	"122"	"661883.630004883"	"HCD"	"MS2"	"32.1971"	"20.1"	"100.000"	"60.4294"	"19543"	"19543"	"19532"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.5"	""	"27.9"	""	"23.5"	""	"35.6"	""	"38.6"	"39.7"	""	"982"	"32"	"36.000"	"29.000"	"0.0293820093174617"	"15"	"0"	"0.0004189"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPPLEDGAMPSAR"	"[K].yDPPLEDGAMPSAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"3"	"3"	"0.8654"	"0.0000"	"1"	"1"	"1"	"583.28790"	"1747.84916"	"1747.85225"	"-1.77"	"-0.00103"	"11/124"	"11"	"124"	"481272.805480957"	"HCD"	"MS2"	"20.07973"	"11.6"	"100.000"	"70.1326"	"23497"	"23497"	"23469"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.7"	""	"15.3"	""	"14.7"	""	"17.5"	""	"21.1"	"23.7"	""	"617"	"52"	"34.000"	"27.000"	"0.000177114928590961"	"22"	"0"	"6.258E-05"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPPLEDGAMPSAR"	"[K].yDPPLEDGAMPSAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"874.42834"	"1747.84941"	"1747.85225"	"-1.62"	"-0.00142"	"4/124"	"4"	"124"	"183249.282470703"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"70.2335"	"23524"	"23524"	"23493"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.0"	""	"12.0"	""	"13.8"	""	"11.5"	""	"19.2"	"22.4"	""	"618"	"16"	"34.000"	"27.000"	"0.820273118650442"	"14"	"0.000936"	"0.01176"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPPLEDGAMPSAR"	"[K].yDPPLEDGAMPSAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"874.42883"	"1747.85039"	"1747.85225"	"-1.07"	"-0.00093"	"7/124"	"7"	"124"	"167124.660095215"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"70.0957"	"23482"	"23482"	"23453"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.4"	""	"10.3"	""	"13.0"	""	"14.7"	""	"17.5"	"18.1"	""	"642"	"21"	"35.000"	"28.000"	"0.264548334919174"	"15"	"0.001211"	"0.01475"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPPLEDGAMPSAR"	"[K].yDPPLEDGAMPSAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.9800"	"0.0000"	"1"	"1"	"1"	"874.42920"	"1747.85112"	"1747.85225"	"-0.65"	"-0.00056"	"11/124"	"11"	"124"	"570100.40045166"	"HCD"	"MS2"	"0"	"24.5"	"100.000"	"70.4190"	"23613"	"23613"	"23592"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"38.5"	""	"26.3"	""	"36.7"	""	"26.7"	""	"46.6"	"59.8"	""	"653"	"50"	"35.000"	"28.000"	"0.000337973917420806"	"17"	"0"	"8.071E-05"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPPLEDGAMPSAR"	"[K].yDPPLEDGAMPSAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.9778"	"0.0000"	"1"	"1"	"1"	"874.42963"	"1747.85198"	"1747.85225"	"-0.16"	"-0.00014"	"11/124"	"11"	"124"	"551942.547668457"	"HCD"	"MS2"	"0"	"24.4"	"100.000"	"70.5590"	"23656"	"23656"	"23637"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.0"	""	"30.4"	""	"34.9"	""	"27.2"	""	"50.5"	"53.0"	""	"655"	"45"	"35.000"	"28.000"	"0.00103564593370514"	"16"	"0"	"6.958E-05"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYDPMHGDVIK"	"[R].dYDPMHGDVIk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.30743"	"1747.90775"	"1747.90893"	"-0.67"	"-0.00039"	"11/94"	"11"	"94"	"3463177.57299805"	"HCD"	"MS2"	"8.9101"	"109.9"	"100.000"	"66.1713"	"21867"	"21867"	"21848"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"138.6"	""	"145.6"	""	"133.0"	""	"147.9"	""	"238.9"	"241.9"	""	"998"	"33"	"36.000"	"29.000"	"0.0273590205495506"	"15"	"0"	"0.0001789"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYDPMHGDVIK"	"[R].dYDPMHGDVIk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.30768"	"1747.90848"	"1747.90893"	"-0.26"	"-0.00015"	"12/94"	"12"	"94"	"3601881.61175537"	"HCD"	"MS2"	"9.28758"	"112.6"	"100.000"	"66.0844"	"21847"	"21847"	"21828"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"145.4"	""	"143.3"	""	"139.4"	""	"150.4"	""	"236.8"	"256.0"	""	"1007"	"36"	"37.000"	"30.000"	"0.01406045824063"	"15"	"0"	"0.0002549"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDFTNENPLETR"	"[R].sPDFTNENPLETR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.62598"	"1748.86338"	"1748.86526"	"-1.08"	"-0.00063"	"11/132"	"11"	"132"	"314567.210754395"	"HCD"	"MS2"	"7.499728"	"10.5"	"100.000"	"73.8316"	"24989"	"24989"	"24967"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.0"	""	"10.9"	""	"14.9"	""	"19.9"	""	"17.7"	"23.9"	""	"775"	"14"	"35.000"	"28.000"	"1.48344588035269"	"13"	"0.001134"	"0.01394"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDFTNENPLETR"	"[R].sPDFTNENPLETR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8594"	"0.0000"	"1"	"1"	"1"	"583.62616"	"1748.86393"	"1748.86526"	"-0.76"	"-0.00044"	"14/132"	"14"	"132"	"1526364.69830322"	"HCD"	"MS2"	"11.06681"	"16.0"	"100.000"	"73.4903"	"24850"	"24850"	"24827"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.2"	""	"16.0"	""	"30.8"	""	"24.3"	""	"27.1"	"28.1"	""	"778"	"64"	"35.000"	"28.000"	"1.64797113793272E-05"	"25"	"0"	"2.313E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDFTNENPLETR"	"[R].sPDFTNENPLETR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"874.93573"	"1748.86418"	"1748.86526"	"-0.61"	"-0.00054"	"13/132"	"13"	"132"	"253291.159118652"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"73.5745"	"24897"	"24897"	"24882"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.4"	""	"16.0"	""	"18.1"	""	"25.2"	""	"33.4"	"29.7"	""	"783"	"45"	"35.000"	"28.000"	"0.00122386007222903"	"21"	"0"	"0.0002539"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDFTNENPLETR"	"[R].sPDFTNENPLETR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"583.62640"	"1748.86466"	"1748.86526"	"-0.34"	"-0.00020"	"15/132"	"15"	"132"	"737336.749206543"	"HCD"	"MS2"	"11.00964"	"11.2"	"100.000"	"73.5719"	"24896"	"24896"	"24882"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.5"	""	"11.0"	""	"21.8"	""	"19.1"	""	"19.7"	"21.7"	""	"783"	"66"	"35.000"	"28.000"	"9.81141772562071E-06"	"25"	"0"	"2.254E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDFTNENPLETR"	"[R].sPDFTNENPLETR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9778"	"0.0000"	"1"	"1"	"1"	"874.93628"	"1748.86528"	"1748.86526"	"0.01"	"0.00001"	"13/132"	"13"	"132"	"170169.173339844"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"73.7578"	"24959"	"24959"	"24937"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.3"	""	"13.6"	""	"18.1"	""	"17.6"	""	"22.0"	"17.6"	""	"790"	"45"	"35.000"	"28.000"	"0.00137910424614041"	"16"	"0"	"0.0001985"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDFTNENPLETR"	"[R].sPDFTNENPLETR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"583.62665"	"1748.86539"	"1748.86526"	"0.08"	"0.00004"	"15/132"	"15"	"132"	"1320416.78991699"	"HCD"	"MS2"	"16.93679"	"15.8"	"100.000"	"73.2861"	"24780"	"24780"	"24759"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.3"	""	"22.9"	""	"25.2"	""	"22.6"	"0.7"	"27.1"	"33.8"	""	"790"	"72"	"35.000"	"28.000"	"2.36917475120926E-06"	"27"	"0"	"2.194E-06"	"1.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDFTNENPLETR"	"[R].sPDFTNENPLETR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"874.93634"	"1748.86540"	"1748.86526"	"0.08"	"0.00007"	"11/132"	"11"	"132"	"603381.348693848"	"HCD"	"MS2"	"0"	"33.7"	"100.000"	"73.4351"	"24828"	"24828"	"24812"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.2"	""	"47.8"	""	"39.9"	""	"61.7"	""	"56.2"	"68.2"	""	"790"	"50"	"35.000"	"28.000"	"0.000386008702277545"	"16"	"0"	"0.0001587"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDFTNENPLETR"	"[R].sPDFTNENPLETR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"874.93640"	"1748.86553"	"1748.86526"	"0.15"	"0.00013"	"14/132"	"14"	"132"	"634883.965698242"	"HCD"	"MS2"	"0"	"37.1"	"100.000"	"73.2883"	"24781"	"24781"	"24759"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.6"	""	"51.4"	""	"49.4"	""	"56.3"	""	"73.7"	"71.4"	""	"786"	"43"	"35.000"	"28.000"	"0.00202951633123924"	"15"	"0"	"0.0001881"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QADYVPSDQDLLR"	"[K].qADYVPSDQDLLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"874.95337"	"1748.89946"	"1748.90164"	"-1.25"	"-0.00109"	"9/134"	"9"	"134"	"170922.162597656"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"76.8118"	"26202"	"26202"	"26179"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.3"	""	"7.3"	""	"6.1"	""	"16.4"	""	"54.7"	"13.0"	""	"990"	"14"	"36.000"	"29.000"	"2.13601943029744"	"15"	"0.004069"	"0.0438"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QADYVPSDQDLLR"	"[K].qADYVPSDQDLLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"874.95404"	"1748.90080"	"1748.90164"	"-0.48"	"-0.00042"	"11/134"	"11"	"134"	"168736.563781738"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"76.5094"	"26080"	"26080"	"26050"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.3"	""	"7.1"	""	"8.5"	""	"18.7"	""	"18.1"	"18.9"	""	"1000"	"27"	"36.000"	"30.000"	"0.0933189845417335"	"15"	"0"	"0.0007923"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QADYVPSDQDLLR"	"[K].qADYVPSDQDLLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"874.95404"	"1748.90080"	"1748.90164"	"-0.48"	"-0.00042"	"7/134"	"7"	"134"	"158468.715026855"	"HCD"	"MS2"	"0"	"11.0"	"100.000"	"76.8986"	"26228"	"26228"	"26208"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.1"	""	"9.1"	""	"10.3"	""	"9.6"	""	"59.0"	"10.0"	""	"1000"	"7"	"36.000"	"30.000"	"8.91189383724045"	"14"	"0.006254"	"0.0709"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QADYVPSDQDLLR"	"[K].qADYVPSDQDLLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"874.95410"	"1748.90093"	"1748.90164"	"-0.41"	"-0.00036"	"9/134"	"9"	"134"	"168636.174194336"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"76.6076"	"26111"	"26111"	"26088"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.0"	""	"10.9"	""	"8.9"	""	"17.4"	""	"19.6"	"22.3"	""	"1000"	"24"	"36.000"	"30.000"	"0.195420447896201"	"14"	"0"	"0.003067"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSTTLNADEAVTR"	"[K].eLSTTLNADEAVTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"874.96368"	"1748.92009"	"1748.92277"	"-1.53"	"-0.00134"	"10/142"	"10"	"142"	"223331.570068359"	"HCD"	"MS2"	"0"	"15.3"	"100.000"	"67.1533"	"22268"	"22268"	"22242"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.9"	""	"15.2"	""	"12.1"	""	"19.7"	""	"62.7"	"21.2"	""	"1117"	"23"	"37.000"	"30.000"	"0.252943298376172"	"20"	"0.0004639"	"0.007587"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YASGPSASLGGPESAVA"	"[R].yASGPSASLGGPESAVA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"875.44641"	"1749.88555"	"1749.88566"	"-0.07"	"-0.00006"	"10/152"	"10"	"152"	"113493.839294434"	"HCD"	"MS2"	"19.84677"	"2.7"	"100.000"	"78.8103"	"27005"	"27005"	"26989"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.4"	""	"3.2"	""	"4.1"	""	"4.1"	""	"3.8"	"6.2"	""	"886"	"44"	"36.000"	"29.000"	"0.00197425718040094"	"15"	"0"	"0.000123"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YASGPSASLGGPESAVA"	"[R].yASGPSASLGGPESAVA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"875.44720"	"1749.88713"	"1749.88566"	"0.84"	"0.00074"	"7/152"	"7"	"152"	"74064.9111328125"	"HCD"	"MS2"	"0"	"1.9"	"100.000"	"78.7296"	"26968"	"26968"	"26949"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	"2.3"	""	"5.1"	""	"2.4"	""	"4.9"	"3.3"	""	"906"	"34"	"36.000"	"29.000"	"0.0166762425060067"	"15"	"0.0002479"	"0.005743"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SETAPAAPAAPAPAEK"	"[M].sETAPAAPAAPAPAEk.[T]"	"N-Term(Prot)(Acetyl); K16(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"875.46332"	"1749.91936"	"1749.92205"	"-1.54"	"-0.00134"	"5/148"	"5"	"148"	"171701.446716309"	"HCD"	"MS2"	"34.59731"	"4.2"	"100.000"	"58.5856"	"18822"	"18822"	"18795"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.6"	""	"6.8"	""	"8.9"	""	"6.7"	""	"7.0"	"4.8"	""	"1081"	"26"	"37.000"	"30.000"	"0.130555658101749"	"14"	"0.0008629"	"0.01098"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SETAPAAPAAPAPAEK"	"[M].sETAPAAPAAPAPAEk.[T]"	"N-Term(Prot)(Acetyl); K16(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"875.46417"	"1749.92107"	"1749.92205"	"-0.56"	"-0.00049"	"11/148"	"11"	"148"	"160126.812438965"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"58.8873"	"18945"	"18945"	"18920"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.8"	""	"7.8"	""	"4.3"	""	"6.5"	""	"9.6"	"5.3"	""	"1095"	"35"	"37.000"	"30.000"	"0.0182550960987871"	"15"	"0"	"0.0007036"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SETAPAAPAAPAPAEK"	"[M].sETAPAAPAAPAPAEk.[T]"	"N-Term(Prot)(Acetyl); K16(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"875.46417"	"1749.92107"	"1749.92205"	"-0.56"	"-0.00049"	"10/148"	"10"	"148"	"315218.013427734"	"HCD"	"MS2"	"0"	"6.9"	"100.000"	"58.4847"	"18796"	"18796"	"18767"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.0"	""	"8.0"	""	"11.8"	""	"8.1"	""	"13.1"	"12.4"	""	"1095"	"67"	"37.000"	"30.000"	"1.10505558411565E-05"	"17"	"0"	"1.713E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SETAPAAPAAPAPAEK"	"[M].sETAPAAPAAPAPAEk.[T]"	"N-Term(Prot)(Acetyl); K16(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"875.46539"	"1749.92351"	"1749.92205"	"0.84"	"0.00073"	"5/148"	"5"	"148"	"142713.012145996"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"57.5632"	"18420"	"18420"	"18392"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.0"	""	"6.1"	""	"7.9"	""	"6.3"	""	"13.7"	"18.5"	""	"1154"	"17"	"37.000"	"30.000"	"1.02843254881755"	"14"	"0.004942"	"0.05513"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SETAPAAPAAPAPAEK"	"[M].sETAPAAPAAPAPAEk.[T]"	"N-Term(Prot)(Acetyl); K16(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"875.46588"	"1749.92449"	"1749.92205"	"1.39"	"0.00122"	"5/148"	"5"	"148"	"167586.633789063"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"57.7058"	"18463"	"18463"	"18438"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.3"	""	"6.5"	""	"10.4"	""	"6.8"	""	"12.9"	"14.1"	""	"1137"	"21"	"37.000"	"30.000"	"0.441296485803411"	"20"	"0.004606"	"0.04952"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGASEEETNLSK"	"[K].eGASEEETNLSk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"876.45587"	"1751.90447"	"1751.90634"	"-1.07"	"-0.00094"	"6/114"	"6"	"114"	"103359.706359863"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"43.3118"	"12620"	"12620"	"12591"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.4"	""	"10.1"	""	"7.8"	""	"13.6"	""	"15.8"	"17.5"	""	"1065"	"19"	"37.000"	"30.000"	"0.650608319037794"	"21"	"0.0008629"	"0.01034"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGASEEETNLSK"	"[K].eGASEEETNLSk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"876.45770"	"1751.90813"	"1751.90634"	"1.02"	"0.00089"	"11/114"	"11"	"114"	"138424.459594727"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"43.3215"	"12613"	"12613"	"12588"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.9"	""	"15.0"	""	"13.1"	""	"16.9"	""	"30.0"	"23.2"	""	"1098"	"26"	"37.000"	"30.000"	"0.136324007480727"	"17"	"0.001374"	"0.01786"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTANEVEAVK"	"[K].mDSTANEVEAVk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"584.64600"	"1751.92344"	"1751.92497"	"-0.88"	"-0.00051"	"9/114"	"9"	"114"	"1196195.7088623"	"HCD"	"MS2"	"48.27747"	"42.2"	"100.000"	"65.7503"	"21711"	"21711"	"21686"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"73.3"	""	"55.6"	""	"54.2"	""	"57.3"	""	"74.4"	"84.9"	""	"1122"	"29"	"37.000"	"30.000"	"0.0772614512049505"	"20"	"0"	"0.0001256"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTANEVEAVK"	"[K].mDSTANEVEAVk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.9516"	"0.0000"	"1"	"1"	"1"	"876.46588"	"1751.92449"	"1751.92497"	"-0.28"	"-0.00024"	"8/114"	"8"	"114"	"436051.875793457"	"HCD"	"MS2"	"42.78641"	"35.7"	"100.000"	"65.9155"	"21763"	"21763"	"21737"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.6"	""	"43.1"	""	"35.0"	""	"41.3"	""	"70.0"	"81.7"	""	"1118"	"62"	"37.000"	"30.000"	"3.28406548064145E-05"	"19"	"0"	"8.049E-06"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTANEVEAVK"	"[K].mDSTANEVEAVk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"876.46594"	"1751.92461"	"1751.92497"	"-0.21"	"-0.00018"	"9/114"	"9"	"114"	"398903.013427734"	"HCD"	"MS2"	"44.1944"	"31.9"	"100.000"	"65.8217"	"21740"	"21740"	"21718"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.8"	""	"34.7"	""	"39.3"	""	"41.6"	""	"68.9"	"65.2"	""	"1116"	"54"	"37.000"	"30.000"	"0.000200278439531913"	"24"	"0"	"1.077E-05"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLHPSPEEEK"	"[K].dLLHPSPEEEk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q71TY3"	"40S ribosomal protein S27 OS=Rattus norvegicus OX=10116 GN=Rps27 PE=1 SV=3"	"Q71TY3"	"40S ribosomal protein S27 OS=Rattus norvegicus OX=10116 GN=Rps27 PE=1 SV=3"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"584.65698"	"1751.95639"	"1751.95799"	"-0.91"	"-0.00053"	"10/98"	"10"	"98"	"3767405.66265869"	"HCD"	"MS2"	"37.6319"	"93.6"	"100.000"	"53.6552"	"16829"	"16829"	"16812"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"141.0"	""	"120.0"	""	"116.2"	""	"160.4"	""	"188.2"	"167.6"	""	"1142"	"37"	"37.000"	"30.000"	"0.0121237258780213"	"16"	"0"	"0.0006089"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLHPSPEEEK"	"[K].dLLHPSPEEEk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q71TY3"	"40S ribosomal protein S27 OS=Rattus norvegicus OX=10116 GN=Rps27 PE=1 SV=3"	"Q71TY3"	"40S ribosomal protein S27 OS=Rattus norvegicus OX=10116 GN=Rps27 PE=1 SV=3"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"584.65723"	"1751.95713"	"1751.95799"	"-0.49"	"-0.00029"	"6/98"	"6"	"98"	"2464623.32098389"	"HCD"	"MS2"	"25.43224"	"62.0"	"100.000"	"54.0167"	"16965"	"16965"	"16944"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"88.1"	""	"77.5"	""	"76.9"	""	"103.8"	""	"130.8"	"115.6"	""	"1140"	"39"	"37.000"	"30.000"	"0.007126476472241"	"17"	"0"	"0.0001891"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDNEGVFNGSWGGR"	"[R].eDNEGVFNGSWGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"876.91010"	"1752.81291"	"1752.81389"	"-0.56"	"-0.00049"	"6/144"	"6"	"144"	"187889.889038086"	"HCD"	"MS2"	"22.94954"	"16.0"	"100.000"	"70.6145"	"23679"	"23679"	"23653"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.2"	""	"22.6"	""	"22.0"	""	"23.8"	""	"29.9"	"27.9"	""	"382"	"12"	"32.000"	"25.000"	"1.22189353577186"	"13"	"0"	"0.001337"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDNEGVFNGSWGGR"	"[R].eDNEGVFNGSWGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"876.91022"	"1752.81316"	"1752.81389"	"-0.42"	"-0.00037"	"7/144"	"7"	"144"	"294510.978515625"	"HCD"	"MS2"	"28.05427"	"23.8"	"100.000"	"70.5204"	"23655"	"23655"	"23624"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.8"	""	"28.1"	""	"35.5"	""	"39.4"	""	"39.1"	"50.3"	""	"386"	"30"	"32.000"	"25.000"	"0.0195234834672161"	"15"	"0"	"0.0002156"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTNNVHYENYR"	"[K].dVTNNVHYENYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"584.95490"	"1752.85013"	"1752.85028"	"-0.08"	"-0.00005"	"14/120"	"14"	"120"	"6134447.94793701"	"HCD"	"MS2"	"2.192123"	"121.2"	"100.000"	"40.0688"	"11298"	"11298"	"11278"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"199.8"	""	"180.2"	""	"184.8"	""	"144.2"	""	"225.2"	"221.3"	""	"643"	"33"	"35.000"	"28.000"	"0.0144604223348192"	"15"	"0"	"9.989E-05"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTNNVHYENYR"	"[K].dVTNNVHYENYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"584.95514"	"1752.85086"	"1752.85028"	"0.33"	"0.00020"	"9/120"	"9"	"120"	"5357950.39355469"	"HCD"	"MS2"	"1.448054"	"111.4"	"100.000"	"40.2674"	"11370"	"11370"	"11352"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"183.9"	""	"177.0"	""	"166.1"	""	"140.6"	""	"185.5"	"207.9"	""	"652"	"34"	"35.000"	"28.000"	"0.0117548637625055"	"15"	"0"	"8.476E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EESGVPGPNSLPANR"	"[R].eESGVPGPNSLPANR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"584.97308"	"1752.90470"	"1752.90779"	"-1.77"	"-0.00103"	"15/142"	"15"	"142"	"991032.689147949"	"HCD"	"MS2"	"0"	"24.1"	"100.000"	"50.8454"	"15671"	"15671"	"15649"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.8"	""	"26.2"	""	"30.2"	""	"44.6"	""	"50.8"	"49.1"	""	"1070"	"36"	"37.000"	"30.000"	"0.0141043729141658"	"21"	"0"	"1.772E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EESGVPGPNSLPANR"	"[R].eESGVPGPNSLPANR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"584.97473"	"1752.90964"	"1752.90779"	"1.05"	"0.00062"	"15/142"	"15"	"142"	"823777.630615234"	"HCD"	"MS2"	"0"	"21.7"	"100.000"	"50.3592"	"15484"	"15484"	"15464"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.2"	""	"29.8"	""	"29.4"	""	"37.3"	""	"41.8"	"38.3"	""	"1105"	"37"	"37.000"	"30.000"	"0.0119490198435918"	"15"	"0"	"9.059E-06"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQEIDQSNDFK"	"[K].aQEIDQSNDFk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"876.95929"	"1752.91130"	"1752.91685"	"-3.16"	"-0.00277"	"10/110"	"10"	"110"	"151508.944763184"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"57.4271"	"18350"	"18350"	"18323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.8"	""	"10.8"	""	"20.9"	""	"13.0"	""	"18.9"	"20.0"	""	"1121"	"31"	"37.000"	"30.000"	"0.0474870965625804"	"16"	"0.0002479"	"0.005273"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQEIDQSNDFK"	"[K].aQEIDQSNDFk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"876.96216"	"1752.91704"	"1752.91685"	"0.11"	"0.00010"	"5/110"	"5"	"110"	"127377.091308594"	"HCD"	"MS2"	"0"	"13.8"	"100.000"	"57.2455"	"18290"	"18290"	"18265"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.7"	""	"15.7"	""	"22.9"	""	"16.9"	""	"25.2"	"22.1"	""	"1140"	"18"	"37.000"	"30.000"	"0.858766027726443"	"20"	"0.000936"	"0.01143"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDDREDLVYQAK"	"[-].mDDREDLVYQAk.[L]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"1"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"877.43488"	"1753.86247"	"1753.86282"	"-0.19"	"-0.00017"	"11/112"	"11"	"112"	"267919.182189941"	"HCD"	"MS2"	"8.749041"	"21.9"	"100.000"	"73.3382"	"24788"	"24788"	"24768"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"39.5"	""	"21.3"	""	"21.7"	""	"27.6"	""	"47.0"	"52.4"	""	"783"	"21"	"35.000"	"28.000"	"0.290222959469309"	"15"	"0.007147"	"0.0821"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDDREDLVYQAK"	"[-].mDDREDLVYQAk.[L]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"1"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"585.29248"	"1753.86289"	"1753.86282"	"0.04"	"0.00002"	"6/112"	"6"	"112"	"1720186.13830566"	"HCD"	"MS2"	"23.1798"	"37.6"	"100.000"	"73.2840"	"24779"	"24779"	"24759"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.4"	""	"36.0"	""	"45.2"	""	"56.6"	""	"72.4"	"74.7"	""	"786"	"16"	"35.000"	"28.000"	"0.887958257696844"	"15"	"0.006769"	"0.07741"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMADNYEDDHFR"	"[K].lMADNYEDDHFR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811U3"	"ELKS/Rab6-interacting/CAST family member 1 OS=Rattus norvegicus OX=10116 GN=Erc1 PE=1 SV=1"	"Q811U3"	"ELKS/Rab6-interacting/CAST family member 1 OS=Rattus norvegicus OX=10116 GN=Erc1 PE=1 SV=1"	"0"	"3"	"3"	"0.8684"	"0.0000"	"1"	"1"	"1"	"585.60486"	"1754.80002"	"1754.80055"	"-0.30"	"-0.00018"	"10/112"	"10"	"112"	"472014.22869873"	"HCD"	"MS2"	"48.06355"	"15.6"	"100.000"	"61.0523"	"19809"	"19809"	"19779"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.8"	""	"16.0"	""	"22.7"	""	"29.2"	""	"30.2"	"29.6"	""	"351"	"38"	"32.000"	"25.000"	"0.00291928920139965"	"20"	"0"	"0.0004463"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMADNYEDDHFR"	"[K].lMADNYEDDHFR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811U3"	"ELKS/Rab6-interacting/CAST family member 1 OS=Rattus norvegicus OX=10116 GN=Erc1 PE=1 SV=1"	"Q811U3"	"ELKS/Rab6-interacting/CAST family member 1 OS=Rattus norvegicus OX=10116 GN=Erc1 PE=1 SV=1"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"585.60529"	"1754.80130"	"1754.80055"	"0.43"	"0.00025"	"11/112"	"11"	"112"	"505633.427429199"	"HCD"	"MS2"	"37.04753"	"15.8"	"100.000"	"61.2704"	"19882"	"19882"	"19857"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.4"	""	"16.7"	""	"25.7"	""	"26.5"	""	"26.4"	"34.1"	""	"370"	"37"	"32.000"	"25.000"	"0.0039099547236978"	"16"	"0.002973"	"0.02918"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVNVYSTSVTSDNLSR"	"[M].aVNVYSTSVTSDNLSR.[H]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q66HR2"	"Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3"	"Q66HR2"	"Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"877.93115"	"1754.85503"	"1754.85553"	"-0.29"	"-0.00025"	"7/164"	"7"	"164"	"54104.6999511719"	"HCD"	"MS2"	"0"	"0.2"	"100.000"	"82.4728"	"28478"	"28478"	"28459"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.0"	""	""	""	""	""	""	""	""	""	"NoQuanLabels"	"706"	"33"	"35.000"	"28.000"	"0.0189572224118699"	"16"	"0"	"0.0006645"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVNVYSTSVTSDNLSR"	"[M].aVNVYSTSVTSDNLSR.[H]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q66HR2"	"Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3"	"Q66HR2"	"Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"877.93188"	"1754.85649"	"1754.85553"	"0.55"	"0.00048"	"10/164"	"10"	"164"	"66135.8755493164"	"HCD"	"MS2"	"0"	"0.8"	"100.000"	"82.4352"	"28460"	"28460"	"28440"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.3"	""	""	""	""	""	"3.2"	""	""	"2.6"	"NoQuanLabels"	"704"	"40"	"35.000"	"28.000"	"0.0033002182643791"	"26"	"0"	"0.0001586"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"878.46399"	"1755.92070"	"1755.92271"	"-1.15"	"-0.00101"	"7/138"	"7"	"138"	"131191.223144531"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"83.5220"	"28885"	"28885"	"28867"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.3"	""	"10.6"	""	"6.5"	""	"5.8"	""	"7.4"	"10.1"	""	"1050"	"17"	"37.000"	"30.000"	"1.04269983161262"	"15"	"0.001036"	"0.01358"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"585.97852"	"1755.92099"	"1755.92271"	"-0.98"	"-0.00057"	"13/138"	"13"	"138"	"1122505.48687744"	"HCD"	"MS2"	"8.596233"	"17.1"	"100.000"	"83.6776"	"28949"	"28949"	"28933"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.8"	""	"17.4"	""	"21.3"	""	"34.4"	""	"34.4"	"37.7"	""	"1047"	"26"	"37.000"	"30.000"	"0.126158549191743"	"14"	"0"	"0.001417"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"585.97870"	"1755.92154"	"1755.92271"	"-0.67"	"-0.00039"	"11/138"	"11"	"138"	"678121.888122559"	"HCD"	"MS2"	"9.74464"	"16.1"	"100.000"	"83.9619"	"29061"	"29061"	"29049"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.3"	""	"20.5"	""	"22.7"	""	"23.2"	"1.3"	"32.3"	"39.5"	""	"1036"	"13"	"37.000"	"30.000"	"2.6505119080988"	"13"	"0.0006732"	"0.008365"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"585.97882"	"1755.92191"	"1755.92271"	"-0.46"	"-0.00027"	"12/138"	"12"	"138"	"981068.804870605"	"HCD"	"MS2"	"11.64372"	"15.3"	"100.000"	"83.6496"	"28936"	"28936"	"28925"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.3"	""	"15.3"	""	"18.5"	""	"26.0"	""	"29.7"	"34.3"	""	"1038"	"28"	"37.000"	"30.000"	"0.0743305519722969"	"14"	"0"	"0.0001062"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"878.46460"	"1755.92192"	"1755.92271"	"-0.45"	"-0.00040"	"13/138"	"13"	"138"	"439699.500976563"	"HCD"	"MS2"	"2.596063"	"15.7"	"100.000"	"83.8605"	"29021"	"29021"	"29007"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.1"	""	"24.8"	""	"20.0"	""	"24.6"	""	"33.5"	"33.8"	""	"1038"	"39"	"37.000"	"30.000"	"0.00726385820415189"	"18"	"0"	"0.003066"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"878.46472"	"1755.92217"	"1755.92271"	"-0.31"	"-0.00027"	"9/138"	"9"	"138"	"168485.816650391"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"83.5712"	"28907"	"28907"	"28888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.6"	""	"10.0"	""	"6.6"	""	"9.8"	""	"10.6"	"13.4"	""	"1043"	"24"	"37.000"	"30.000"	"0.229749361318668"	"23"	"0.0003538"	"0.006231"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"878.46490"	"1755.92253"	"1755.92271"	"-0.10"	"-0.00009"	"3/138"	"3"	"138"	"51919.3646240234"	"HCD"	"MS2"	"0"	"2.0"	"100.000"	"84.1348"	"29130"	"29130"	"29102"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.2"	""	"2.5"	""	""	""	"4.9"	""	"4.4"	"4.0"	""	"1033"	"4"	"37.000"	"30.000"	"20.2801109133893"	"15"	"0.006639"	"0.07415"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"585.97913"	"1755.92282"	"1755.92271"	"0.06"	"0.00004"	"8/138"	"8"	"138"	"812748.897949219"	"HCD"	"MS2"	"26.72605"	"19.0"	"100.000"	"83.9410"	"29051"	"29051"	"29039"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.2"	""	"24.5"	""	"26.7"	""	"37.3"	""	"42.1"	"34.4"	""	"1030"	"10"	"37.000"	"30.000"	"5.38030912898712"	"15"	"0.001211"	"0.01447"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"878.46521"	"1755.92314"	"1755.92271"	"0.24"	"0.00021"	"13/138"	"13"	"138"	"424496.641723633"	"HCD"	"MS2"	"0"	"15.0"	"100.000"	"83.8229"	"29004"	"29004"	"28989"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.8"	""	"17.0"	""	"18.1"	""	"28.0"	""	"34.5"	"27.9"	""	"1028"	"43"	"37.000"	"30.000"	"0.00243760380423766"	"22"	"0"	"0.0003094"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAGVEAAAEVAATEPK"	"[M].aAGVEAAAEVAATEPk.[M]"	"N-Term(Prot)(Acetyl); K16(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"878.47028"	"1755.93328"	"1755.93261"	"0.38"	"0.00033"	"5/138"	"5"	"138"	"85627.6961669922"	"HCD"	"MS2"	"0"	"0.9"	"100.000"	"104.3417"	"36271"	"36271"	"36261"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	""	""	""	""	"4.7"	"4.5"	""	"1034"	"21"	"37.000"	"30.000"	"0.422173085992393"	"14"	"0"	"0.001297"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAGVEAAAEVAATEPK"	"[M].aAGVEAAAEVAATEPk.[M]"	"N-Term(Prot)(Acetyl); K16(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"878.47058"	"1755.93389"	"1755.93261"	"0.73"	"0.00064"	"5/138"	"5"	"138"	"67431.232421875"	"HCD"	"MS2"	"0"	"1.0"	"100.000"	"104.3004"	"36326"	"36326"	"36319"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	"1.9"	""	""	""	"2.0"	""	"2.4"	"3.6"	""	"1032"	"21"	"37.000"	"30.000"	"0.37467067403654"	"14"	"0"	"0.002389"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"586.29834"	"1756.88047"	"1756.88277"	"-1.31"	"-0.00077"	"6/96"	"6"	"96"	"1943018.82891846"	"HCD"	"MS2"	"15.86778"	"65.1"	"100.000"	"42.1096"	"12128"	"12128"	"12108"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.8"	""	"68.0"	""	"125.5"	""	"108.9"	""	"113.3"	"112.9"	""	"805"	"22"	"36.000"	"29.000"	"0.277182549278571"	"16"	"0.001978"	"0.02209"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"878.94446"	"1756.88164"	"1756.88277"	"-0.64"	"-0.00057"	"9/96"	"9"	"96"	"529022.022033691"	"HCD"	"MS2"	"0"	"36.6"	"100.000"	"42.0381"	"12099"	"12099"	"12076"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.0"	""	"36.1"	""	"39.4"	""	"71.8"	""	"75.9"	"65.0"	""	"811"	"50"	"36.000"	"29.000"	"0.000415901856094946"	"19"	"0"	"0.002897"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"586.29895"	"1756.88230"	"1756.88277"	"-0.27"	"-0.00016"	"12/96"	"12"	"96"	"3653116.60375977"	"HCD"	"MS2"	"8.417919"	"92.5"	"100.000"	"41.9485"	"12052"	"12052"	"12033"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"142.7"	""	"91.8"	""	"110.5"	""	"195.2"	""	"178.2"	"164.2"	""	"810"	"27"	"36.000"	"29.000"	"0.0778852150208614"	"18"	"0.0001301"	"0.004995"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"0.8846"	"0.0000"	"1"	"1"	"1"	"586.29913"	"1756.88285"	"1756.88277"	"0.04"	"0.00002"	"10/96"	"10"	"96"	"3765504.82836914"	"HCD"	"MS2"	"6.359649"	"99.0"	"100.000"	"41.7988"	"12002"	"12002"	"11985"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"152.8"	""	"103.9"	""	"124.5"	""	"200.3"	""	"183.4"	"173.4"	""	"820"	"26"	"36.000"	"29.000"	"0.0928504166113155"	"18"	"0.0004639"	"0.007733"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"878.94531"	"1756.88335"	"1756.88277"	"0.33"	"0.00029"	"9/96"	"9"	"96"	"714482.325256348"	"HCD"	"MS2"	"0"	"48.8"	"100.000"	"41.9578"	"12056"	"12056"	"12033"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.3"	""	"46.3"	""	"60.4"	""	"109.6"	"0.4"	"84.5"	"77.7"	""	"819"	"53"	"36.000"	"29.000"	"0.000210500875323003"	"16"	"0.0001301"	"0.004028"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEAHLAVNDFDLAR"	"[R].gEAHLAVNDFDLAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.31134"	"1756.91947"	"1756.91796"	"0.86"	"0.00050"	"10/134"	"10"	"134"	"421191.882507324"	"HCD"	"MS2"	"5.17565"	"12.3"	"100.000"	"71.3700"	"24001"	"24001"	"23978"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.7"	""	"13.0"	""	"17.4"	""	"13.3"	""	"26.4"	"28.5"	""	"1020"	"33"	"37.000"	"30.000"	"0.0277057669061141"	"15"	"0"	"0.001479"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDPNLVPSVSNK"	"[K].eDPNLVPSVSNk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12075"	"Cytochrome c oxidase subunit 5B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox5b PE=1 SV=2"	"P12075"	"Cytochrome c oxidase subunit 5B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox5b PE=1 SV=2"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"586.33197"	"1756.98136"	"1756.98453"	"-1.81"	"-0.00106"	"11/122"	"11"	"122"	"819896.348205566"	"HCD"	"MS2"	"15.67262"	"24.6"	"100.000"	"69.0635"	"23061"	"23061"	"23038"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.8"	""	"29.7"	""	"31.0"	""	"51.3"	""	"43.0"	"55.7"	""	"995"	"33"	"36.000"	"29.000"	"0.024422666838592"	"17"	"0"	"0.000414"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDPNLVPSVSNK"	"[K].eDPNLVPSVSNk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12075"	"Cytochrome c oxidase subunit 5B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox5b PE=1 SV=2"	"P12075"	"Cytochrome c oxidase subunit 5B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox5b PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"878.99518"	"1756.98308"	"1756.98453"	"-0.83"	"-0.00073"	"7/122"	"7"	"122"	"105083.73828125"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"68.9966"	"23034"	"23034"	"23007"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.7"	""	"5.3"	""	"9.0"	""	"10.1"	""	"10.6"	"9.8"	""	"988"	"13"	"36.000"	"29.000"	"2.36988323626525"	"14"	"0.007339"	"0.08393"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDPNLVPSVSNK"	"[K].eDPNLVPSVSNk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12075"	"Cytochrome c oxidase subunit 5B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox5b PE=1 SV=2"	"P12075"	"Cytochrome c oxidase subunit 5B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox5b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"878.99530"	"1756.98332"	"1756.98453"	"-0.69"	"-0.00061"	"3/122"	"3"	"122"	"73435.0445556641"	"HCD"	"MS2"	"100"	"4.1"	"100.000"	"69.4014"	"23185"	"23185"	"23155"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.5"	""	"9.6"	""	"3.6"	""	"8.2"	""	"7.1"	"5.9"	""	"986"	"9"	"36.000"	"29.000"	"6.5742606605652"	"13"	"0.008668"	"0.1084"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDPNLVPSVSNK"	"[K].eDPNLVPSVSNk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12075"	"Cytochrome c oxidase subunit 5B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox5b PE=1 SV=2"	"P12075"	"Cytochrome c oxidase subunit 5B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox5b PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.33270"	"1756.98355"	"1756.98453"	"-0.56"	"-0.00033"	"12/122"	"12"	"122"	"681635.801574707"	"HCD"	"MS2"	"32.39395"	"23.0"	"100.000"	"69.1410"	"23078"	"23078"	"23059"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.8"	""	"25.6"	""	"34.8"	""	"41.6"	""	"40.0"	"50.3"	""	"986"	"25"	"36.000"	"29.000"	"0.146840859970859"	"14"	"0"	"0.001149"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTEELTYSVPYGR"	"[R].dTEELTYSVPYGR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"879.93915"	"1758.87102"	"1758.87476"	"-2.13"	"-0.00187"	"12/110"	"12"	"110"	"429390.541625977"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"75.4535"	"25642"	"25642"	"25611"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.9"	""	"28.2"	""	"26.6"	""	"38.3"	""	"35.9"	"30.9"	""	"727"	"56"	"35.000"	"28.000"	"9.21519257185989E-05"	"16"	"0"	"8.28E-07"	"1.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTEELTYSVPYGR"	"[R].dTEELTYSVPYGR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"879.94043"	"1758.87358"	"1758.87476"	"-0.67"	"-0.00059"	"12/110"	"12"	"110"	"599131.382202148"	"HCD"	"MS2"	"0"	"30.3"	"100.000"	"75.3395"	"25606"	"25606"	"25582"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.2"	""	"51.1"	""	"35.0"	""	"42.8"	""	"48.1"	"44.8"	""	"759"	"48"	"35.000"	"28.000"	"0.000601466966538992"	"18"	"0"	"1.69E-06"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTEELTYSVPYGR"	"[R].dTEELTYSVPYGR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.96283"	"1758.87394"	"1758.87476"	"-0.47"	"-0.00028"	"15/110"	"15"	"110"	"5271829.39233398"	"HCD"	"MS2"	"12.95619"	"53.7"	"100.000"	"75.7903"	"25779"	"25779"	"25762"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"82.9"	""	"63.9"	""	"59.5"	""	"100.5"	""	"100.8"	"101.4"	""	"753"	"39"	"35.000"	"28.000"	"0.00511405012640063"	"15"	"0"	"1.773E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTEELTYSVPYGR"	"[R].dTEELTYSVPYGR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"0.9804"	"0.0000"	"1"	"1"	"1"	"879.94067"	"1758.87407"	"1758.87476"	"-0.39"	"-0.00034"	"9/110"	"9"	"110"	"2281934.35559082"	"HCD"	"MS2"	"0"	"110.4"	"100.000"	"75.7579"	"25765"	"25765"	"25746"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"242.7"	""	"170.7"	""	"122.8"	""	"180.9"	"1.4"	"172.4"	"151.0"	""	"753"	"51"	"35.000"	"28.000"	"0.000282986019597854"	"17"	"0"	"2.654E-06"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTEELTYSVPYGR"	"[R].dTEELTYSVPYGR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.96289"	"1758.87412"	"1758.87476"	"-0.37"	"-0.00021"	"14/110"	"14"	"110"	"2432949.50512695"	"HCD"	"MS2"	"10.53411"	"22.9"	"100.000"	"75.5020"	"25661"	"25661"	"25643"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.0"	""	"31.4"	""	"29.0"	""	"38.8"	""	"41.4"	"40.9"	""	"757"	"41"	"35.000"	"28.000"	"0.00314098515504209"	"15"	"0"	"6.44E-05"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTEELTYSVPYGR"	"[R].dTEELTYSVPYGR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.96301"	"1758.87448"	"1758.87476"	"-0.16"	"-0.00009"	"14/110"	"14"	"110"	"2288181.45831299"	"HCD"	"MS2"	"4.921971"	"23.3"	"100.000"	"75.3603"	"25615"	"25615"	"25598"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.7"	""	"28.6"	""	"21.6"	""	"42.1"	""	"47.1"	"42.8"	""	"760"	"33"	"35.000"	"28.000"	"0.0171310347725755"	"15"	"0"	"0.0001346"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTEELTYSVPYGR"	"[R].dTEELTYSVPYGR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.96313"	"1758.87485"	"1758.87476"	"0.05"	"0.00003"	"14/110"	"14"	"110"	"5112637.63684082"	"HCD"	"MS2"	"12.49164"	"47.5"	"100.000"	"75.6603"	"25736"	"25736"	"25719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.4"	""	"65.0"	""	"58.2"	""	"84.6"	"0.2"	"100.5"	"80.3"	""	"761"	"37"	"35.000"	"28.000"	"0.00678195121013997"	"15"	"0"	"1.209E-05"	"0.885"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTEELTYSVPYGR"	"[R].dTEELTYSVPYGR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"879.94128"	"1758.87529"	"1758.87476"	"0.30"	"0.00027"	"12/110"	"12"	"110"	"2159710.29608154"	"HCD"	"MS2"	"0"	"100.5"	"100.000"	"75.6256"	"25721"	"25721"	"25703"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"245.7"	""	"149.5"	""	"114.3"	""	"163.0"	""	"137.3"	"142.5"	""	"763"	"56"	"35.000"	"28.000"	"0.000107027293287858"	"20"	"0"	"4.096E-06"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDELPATGGDGGK"	"[R].sPDELPATGGDGGk.[H]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.5484"	"0.0000"	"1"	"1"	"1"	"879.96759"	"1758.92790"	"1758.92741"	"0.28"	"0.00025"	"9/124"	"9"	"124"	"138880.319885254"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"51.9047"	"16103"	"16103"	"16075"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.1"	""	"13.6"	""	"16.4"	""	"13.6"	""	"21.9"	"16.5"	""	"999"	"31"	"36.000"	"29.000"	"0.0417383707606508"	"29"	"0.0002479"	"0.00585"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDELPATGGDGGK"	"[R].sPDELPATGGDGGk.[H]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"879.96771"	"1758.92815"	"1758.92741"	"0.42"	"0.00037"	"11/124"	"11"	"124"	"133704.108825684"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"51.5127"	"15954"	"15954"	"15925"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.6"	""	"11.7"	""	"12.2"	""	"14.9"	""	"14.5"	"17.6"	""	"1000"	"32"	"36.000"	"30.000"	"0.0334171958784307"	"24"	"0.0001301"	"0.003925"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQANGELEVk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8475"	"0.0000"	"1"	"1"	"1"	"880.00317"	"1758.99907"	"1759.00019"	"-0.63"	"-0.00056"	"9/118"	"9"	"118"	"211778.535400391"	"HCD"	"MS2"	"0"	"17.5"	"100.000"	"70.0952"	"23467"	"23467"	"23445"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.7"	""	"24.2"	""	"30.6"	""	"23.9"	"1.0"	"26.6"	"30.0"	""	"970"	"59"	"36.000"	"29.000"	"5.46690766245122E-05"	"25"	"0"	"9.411E-05"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQANGELEVk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.7759"	"0.0000"	"1"	"1"	"1"	"587.00458"	"1758.99918"	"1759.00019"	"-0.57"	"-0.00034"	"9/118"	"9"	"118"	"2017967.6072998"	"HCD"	"MS2"	"34.82185"	"51.3"	"100.000"	"69.7955"	"23345"	"23345"	"23323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"81.8"	""	"63.2"	""	"73.2"	""	"80.7"	"1.9"	"81.5"	"103.5"	""	"970"	"58"	"36.000"	"29.000"	"7.90208575830264E-05"	"29"	"0"	"4.881E-06"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQANGELEVk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"880.00330"	"1758.99932"	"1759.00019"	"-0.49"	"-0.00043"	"10/118"	"10"	"118"	"249148.458496094"	"HCD"	"MS2"	"0"	"19.5"	"100.000"	"69.9577"	"23425"	"23425"	"23406"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.6"	""	"22.4"	""	"32.0"	""	"30.6"	"1.5"	"31.7"	"38.5"	""	"968"	"65"	"36.000"	"29.000"	"1.61007223794298E-05"	"29"	"0"	"8.079E-06"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQANGELEVk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"880.00348"	"1758.99968"	"1759.00019"	"-0.29"	"-0.00025"	"11/118"	"11"	"118"	"567031.955871582"	"HCD"	"MS2"	"0"	"49.7"	"100.000"	"69.7978"	"23346"	"23346"	"23323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"81.4"	""	"66.2"	""	"71.1"	""	"77.2"	"0.0"	"75.9"	"98.3"	""	"966"	"90"	"36.000"	"29.000"	"4.86347996055421E-08"	""	"0"	"3.867E-07"	"1.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQANGELEVk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.6222"	"0.0000"	"1"	"1"	"1"	"587.00488"	"1759.00010"	"1759.00019"	"-0.05"	"-0.00003"	"11/118"	"11"	"118"	"1097527.421875"	"HCD"	"MS2"	"27.1982"	"31.7"	"100.000"	"70.0909"	"23465"	"23465"	"23445"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.5"	""	"41.3"	""	"40.0"	""	"51.4"	""	"55.3"	"71.1"	""	"954"	"45"	"36.000"	"29.000"	"0.00159044398888063"	""	"0"	"0.0001012"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQANGELEVk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.6964"	"0.0000"	"1"	"1"	"1"	"587.00488"	"1759.00010"	"1759.00019"	"-0.05"	"-0.00003"	"12/118"	"12"	"118"	"1994969.34185791"	"HCD"	"MS2"	"30.67391"	"51.7"	"100.000"	"69.6532"	"23301"	"23301"	"23278"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.3"	""	"61.7"	""	"78.4"	""	"82.4"	"1.1"	"92.2"	"95.0"	""	"954"	"56"	"36.000"	"29.000"	"0.000112594811722714"	""	"0"	"2.185E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQANGELEVk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"880.00397"	"1759.00066"	"1759.00019"	"0.27"	"0.00024"	"18/118"	"18"	"118"	"510864.911071777"	"HCD"	"MS2"	"0"	"39.9"	"100.000"	"69.6509"	"23300"	"23300"	"23278"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"72.7"	""	"55.1"	""	"51.6"	""	"58.0"	"1.1"	"61.0"	"77.6"	""	"955"	"63"	"36.000"	"29.000"	"2.63616977256562E-05"	"28"	"0"	"2.303E-07"	"1.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQAnGELEVk.[I]"	"N-Term(TMT6plex); N6(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.4074"	"0.0000"	"1"	"1"	"1"	"880.49493"	"1759.98259"	"1759.98420"	"-0.91"	"-0.00080"	"15/118"	"15"	"118"	"419900.539550781"	"HCD"	"MS2"	"48.4613"	"30.4"	"100.000"	"72.2204"	"24347"	"24347"	"24325"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.3"	""	"34.1"	""	"44.8"	""	"40.8"	""	"51.6"	"64.7"	""	"1078"	"54"	"37.000"	"30.000"	"0.000193904891648945"	"21"	"0"	"0.0001858"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQAnGELEVk.[I]"	"N-Term(TMT6plex); N6(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"880.49512"	"1759.98296"	"1759.98420"	"-0.71"	"-0.00062"	"7/118"	"7"	"118"	"98290.8970336914"	"HCD"	"MS2"	"30.72256"	"6.6"	"100.000"	"74.4484"	"25253"	"25253"	"25228"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.5"	""	"9.1"	""	"11.0"	""	"6.7"	""	"14.8"	"15.3"	""	"1070"	"13"	"37.000"	"30.000"	"2.95361430015205"	"13"	"0.00918"	"0.1198"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQAnGELEVk.[I]"	"N-Term(TMT6plex); N6(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.2439"	"0.0000"	"1"	"1"	"1"	"880.49615"	"1759.98503"	"1759.98420"	"0.47"	"0.00042"	"8/118"	"8"	"118"	"143789.91796875"	"HCD"	"MS2"	"0"	"11.0"	"100.000"	"74.6710"	"25330"	"25330"	"25301"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.3"	""	"12.3"	""	"18.3"	""	"14.7"	""	"20.2"	"24.5"	""	"1051"	"41"	"37.000"	"30.000"	"0.00382448287284101"	"24"	"0"	"0.001593"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQAnGELEVk.[I]"	"N-Term(TMT6plex); N6(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.5208"	"0.0000"	"1"	"1"	"1"	"880.49615"	"1759.98503"	"1759.98420"	"0.47"	"0.00042"	"8/118"	"8"	"118"	"354001.211364746"	"HCD"	"MS2"	"44.11171"	"29.6"	"100.000"	"72.3400"	"24382"	"24382"	"24362"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.7"	"2.0"	"35.4"	""	"37.1"	""	"41.8"	""	"49.9"	"61.4"	""	"1051"	"48"	"37.000"	"30.000"	"0.000870107115803237"	"21"	"0"	"0.0002154"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGPNELPAEEGK"	"[K].yGPNELPAEEGk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q64578"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1"	"Q64578"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"881.47894"	"1761.95061"	"1761.94234"	"4.70"	"0.00414"	"8/114"	"8"	"114"	"143148.418334961"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"62.5911"	"20431"	"20431"	"20404"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.8"	""	"3.3"	""	"9.3"	""	"8.2"	"1.4"	"10.1"	"77.3"	""	"1176"	"20"	"37.000"	"30.000"	"0.589355479989805"	"16"	"0.00918"	"0.1203"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDKPDMAEIEK"	"[M].sDkPDMAEIEk.[F]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"881.96777"	"1762.92827"	"1762.92972"	"-0.82"	"-0.00073"	"8/114"	"8"	"114"	"526307.140075684"	"HCD"	"MS2"	"0"	"55.5"	"100.000"	"70.4119"	"23610"	"23610"	"23592"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"93.0"	""	"46.9"	""	"56.3"	""	"55.8"	""	"148.6"	"127.9"	""	"1052"	"45"	"37.000"	"30.000"	"0.00162924255138792"	"29"	"0"	"0.002655"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDKPDMAEIEK"	"[M].sDkPDMAEIEk.[F]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"881.96802"	"1762.92876"	"1762.92972"	"-0.55"	"-0.00048"	"9/114"	"9"	"114"	"293799.672058105"	"HCD"	"MS2"	"0"	"31.3"	"100.000"	"70.2636"	"23536"	"23536"	"23509"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.5"	""	"36.2"	""	"32.0"	""	"38.5"	""	"78.9"	"71.4"	""	"1063"	"32"	"37.000"	"30.000"	"0.0305142899663195"	"21"	"0.005617"	"0.06383"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDKPDMAEIEK"	"[M].sDkPDMAEIEk.[F]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"0"	"2"	"2"	"0.6809"	"0.0000"	"1"	"1"	"1"	"881.96814"	"1762.92900"	"1762.92972"	"-0.41"	"-0.00036"	"11/114"	"11"	"114"	"481400.672912598"	"HCD"	"MS2"	"0"	"47.4"	"100.000"	"70.5567"	"23655"	"23655"	"23637"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"72.6"	""	"42.1"	""	"49.8"	""	"56.0"	"0.3"	"116.4"	"113.6"	""	"1065"	"47"	"37.000"	"30.000"	"0.00109981493296911"	"30"	"0"	"0.001038"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDKPDMAEIEK"	"[M].sDkPDMAEIEk.[F]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"0"	"3"	"3"	"0.5745"	"0.0000"	"1"	"1"	"1"	"588.31458"	"1762.92917"	"1762.92972"	"-0.31"	"-0.00018"	"10/114"	"10"	"114"	"1218165.19561768"	"HCD"	"MS2"	"5.142958"	"41.1"	"100.000"	"70.5982"	"23672"	"23672"	"23653"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.8"	""	"39.6"	""	"50.2"	""	"52.5"	"0.8"	"105.4"	"92.4"	""	"1067"	"47"	"37.000"	"30.000"	"0.00105471330299968"	""	"0"	"0.001961"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDKPDMAEIEK"	"[M].sDkPDMAEIEk.[F]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"0"	"3"	"3"	"0.4412"	"0.0000"	"1"	"1"	"1"	"588.31470"	"1762.92954"	"1762.92972"	"-0.10"	"-0.00006"	"9/114"	"9"	"114"	"1062541.36938477"	"HCD"	"MS2"	"21.85868"	"37.6"	"100.000"	"70.1212"	"23492"	"23492"	"23469"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"61.0"	""	"34.0"	""	"47.5"	""	"50.0"	"1.2"	"80.0"	"83.2"	""	"1069"	"34"	"37.000"	"30.000"	"0.022333033097262"	""	"0.0008629"	"0.01103"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDKPDMAEIEK"	"[M].sDkPDMAEIEk.[F]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"881.96863"	"1762.92998"	"1762.92972"	"0.15"	"0.00013"	"9/114"	"9"	"114"	"244143.35760498"	"HCD"	"MS2"	"0"	"23.7"	"100.000"	"70.0980"	"23483"	"23483"	"23453"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.7"	""	"18.0"	""	"24.2"	""	"35.5"	""	"56.2"	"49.7"	""	"1085"	"31"	"37.000"	"30.000"	"0.0395730699313104"	"20"	"0.002056"	"0.02238"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDKPDMAEIEK"	"[M].sDkPDMAEIEk.[F]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"0"	"3"	"3"	"0.5745"	"0.0000"	"1"	"1"	"1"	"588.31506"	"1762.93064"	"1762.92972"	"0.52"	"0.00030"	"10/114"	"10"	"114"	"1355658.19030762"	"HCD"	"MS2"	"3.74298"	"42.8"	"100.000"	"70.4512"	"23626"	"23626"	"23608"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.1"	""	"41.8"	""	"51.8"	""	"53.7"	"1.3"	"102.5"	"97.2"	""	"1090"	"47"	"37.000"	"30.000"	"0.00107744845386096"	""	"0"	"0.001307"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDKPDMAEIEK"	"[M].sDkPDMAEIEk.[F]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"0"	"3"	"3"	"0.5490"	"0.0000"	"1"	"1"	"1"	"588.31525"	"1762.93119"	"1762.92972"	"0.83"	"0.00049"	"10/114"	"10"	"114"	"1209591.45196533"	"HCD"	"MS2"	"17.54075"	"42.6"	"100.000"	"70.2843"	"23544"	"23544"	"23525"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.3"	""	"38.5"	""	"48.5"	""	"67.2"	"0.1"	"94.8"	"90.6"	""	"1089"	"51"	"37.000"	"30.000"	"0.000467732862459689"	""	"0.0002479"	"0.005715"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYYYNGDSAGLPTR"	"[K].gYYYnGDSAGLPTR.[L]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"882.42535"	"1763.84343"	"1763.84380"	"-0.21"	"-0.00018"	"5/134"	"5"	"134"	"149642.748718262"	"HCD"	"MS2"	"23.4689"	"11.0"	"100.000"	"68.0673"	"22655"	"22655"	"22626"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.2"	""	"13.4"	""	"12.5"	""	"16.6"	""	"21.3"	"25.5"	""	"573"	"23"	"34.000"	"27.000"	"0.148978853006852"	"19"	"0.001211"	"0.01459"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYYYNGDSAGLPTR"	"[K].gYYYnGDSAGLPTR.[L]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"882.42773"	"1763.84819"	"1763.84380"	"2.49"	"0.00220"	"5/134"	"5"	"134"	"102199.396911621"	"HCD"	"MS2"	"0"	"7.2"	"100.000"	"68.1474"	"22673"	"22673"	"22647"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.1"	""	"8.0"	""	"8.3"	""	"11.8"	""	"11.2"	"15.1"	""	"610"	"19"	"34.000"	"27.000"	"0.384857398050155"	"14"	"0.001812"	"0.02026"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPPLEDGAMPSAR"	"[K].yDPPLEDGAmPSAR.[L]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"882.42957"	"1763.85185"	"1763.84717"	"2.66"	"0.00234"	"5/124"	"5"	"124"	"79017.5230102539"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"55.6629"	"17631"	"17631"	"17602"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.0"	""	"4.0"	""	"3.2"	""	"6.7"	""	"11.3"	"8.3"	""	"652"	"9"	"35.000"	"28.000"	"4.16119051672498"	"13"	"0.001546"	"0.01904"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSMNPEYDYLFK"	"[M].sSMNPEYDYLFk.[L]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"882.92078"	"1764.83428"	"1764.83520"	"-0.53"	"-0.00046"	"5/118"	"5"	"118"	"82915.5391235352"	"HCD"	"MS2"	"5.469258"	"3.1"	"100.000"	"109.8479"	"38340"	"38340"	"38335"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.2"	""	"4.2"	""	"3.8"	""	"4.0"	""	"4.8"	"7.0"	""	"547"	"19"	"34.000"	"27.000"	"0.382787132723611"	"14"	"0.009594"	"0.1258"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTYSMSSTLSLTK"	"[K].DSTYSmSSTLSLTk.[VA]"	"M6(Oxidation); K14(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"883.43951"	"1765.87175"	"1765.87271"	"-0.54"	"-0.00048"	"4/128"	"4"	"128"	"68701.6278686523"	"HCD"	"MS2"	"100"	"2.4"	"100.000"	"66.2381"	"21895"	"21895"	"21864"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	""	""	"3.3"	""	"4.6"	""	"8.2"	"7.3"	""	"811"	"10"	"36.000"	"29.000"	"4.23634048894034"	"15"	"0.004942"	"0.0534"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANSEEPFEDAK"	"[R].aANSEEPFEDAk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P35248"	"Pulmonary surfactant-associated protein D OS=Rattus norvegicus OX=10116 GN=Sftpd PE=1 SV=1"	"P35248"	"Pulmonary surfactant-associated protein D OS=Rattus norvegicus OX=10116 GN=Sftpd PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"883.45288"	"1765.89849"	"1765.90086"	"-1.35"	"-0.00119"	"8/118"	"8"	"118"	"131577.622680664"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"56.0684"	"17796"	"17796"	"17773"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.9"	""	"9.7"	""	"13.0"	""	"18.4"	""	"28.5"	"21.5"	""	"1010"	"14"	"37.000"	"30.000"	"1.80007822380253"	"14"	"0.002973"	"0.02885"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANSEEPFEDAK"	"[R].aANSEEPFEDAk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P35248"	"Pulmonary surfactant-associated protein D OS=Rattus norvegicus OX=10116 GN=Sftpd PE=1 SV=1"	"P35248"	"Pulmonary surfactant-associated protein D OS=Rattus norvegicus OX=10116 GN=Sftpd PE=1 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"883.45343"	"1765.89958"	"1765.90086"	"-0.73"	"-0.00064"	"8/118"	"8"	"118"	"407364.636413574"	"HCD"	"MS2"	"0"	"36.1"	"100.000"	"55.7484"	"17680"	"17680"	"17651"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"70.3"	""	"40.9"	""	"43.9"	""	"54.0"	""	"67.5"	"67.8"	""	"1013"	"41"	"37.000"	"30.000"	"0.00407924180467327"	"19"	"0"	"0.0004477"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANSEEPFEDAK"	"[R].aANSEEPFEDAk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P35248"	"Pulmonary surfactant-associated protein D OS=Rattus norvegicus OX=10116 GN=Sftpd PE=1 SV=1"	"P35248"	"Pulmonary surfactant-associated protein D OS=Rattus norvegicus OX=10116 GN=Sftpd PE=1 SV=1"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"589.30475"	"1765.89969"	"1765.90086"	"-0.66"	"-0.00039"	"11/118"	"11"	"118"	"597821.675231934"	"HCD"	"MS2"	"40.80662"	"25.3"	"100.000"	"55.8889"	"17737"	"17737"	"17713"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.1"	""	"31.7"	""	"33.6"	""	"36.8"	""	"47.5"	"48.5"	""	"1011"	"32"	"37.000"	"30.000"	"0.0324878641103754"	"17"	"0"	"0.001278"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANSEEPFEDAK"	"[R].aANSEEPFEDAk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P35248"	"Pulmonary surfactant-associated protein D OS=Rattus norvegicus OX=10116 GN=Sftpd PE=1 SV=1"	"P35248"	"Pulmonary surfactant-associated protein D OS=Rattus norvegicus OX=10116 GN=Sftpd PE=1 SV=1"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"589.30499"	"1765.90042"	"1765.90086"	"-0.25"	"-0.00015"	"10/118"	"10"	"118"	"981384.765930176"	"HCD"	"MS2"	"28.50622"	"36.0"	"100.000"	"55.9878"	"17763"	"17763"	"17741"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.2"	""	"33.5"	""	"42.5"	""	"60.5"	"1.7"	"66.5"	"75.9"	""	"1028"	"31"	"37.000"	"30.000"	"0.0384559123262733"	"16"	"0"	"0.0008922"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEVQEEEMSTK"	"[K].vEVQEEEMSTk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"3"	"3"	"0.5769"	"0.0000"	"1"	"1"	"1"	"589.64667"	"1766.92545"	"1766.92464"	"0.46"	"0.00027"	"9/110"	"9"	"110"	"482991.667907715"	"HCD"	"MS2"	"11.89054"	"20.0"	"100.000"	"58.2913"	"18717"	"18717"	"18687"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.2"	""	"24.3"	""	"32.2"	""	"26.6"	""	"45.9"	"41.4"	""	"1147"	"26"	"37.000"	"30.000"	"0.159784049020917"	"25"	"0.0006732"	"0.008983"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTGLVDEAIDTK"	"[K].mTGLVDEAIDTk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7636"	"0.0000"	"1"	"1"	"1"	"589.65820"	"1766.96006"	"1766.96102"	"-0.55"	"-0.00032"	"14/106"	"14"	"106"	"737603.467895508"	"HCD"	"MS2"	"11.91385"	"22.8"	"100.000"	"77.3676"	"26428"	"26428"	"26412"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.3"	""	"13.4"	""	"24.1"	""	"52.4"	""	"44.2"	"55.8"	""	"1053"	"55"	"37.000"	"30.000"	"0.000156458216571007"	"29"	"0"	"0.0001293"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTGLVDEAIDTK"	"[K].mTGLVDEAIDTk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"589.65833"	"1766.96042"	"1766.96102"	"-0.34"	"-0.00020"	"11/106"	"11"	"106"	"692950.321166992"	"HCD"	"MS2"	"16.30427"	"21.8"	"100.000"	"77.4475"	"26450"	"26450"	"26429"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.8"	""	"22.7"	""	"21.8"	""	"36.8"	""	"47.1"	"52.4"	""	"1051"	"51"	"37.000"	"30.000"	"0.000459803973882018"	"25"	"0"	"0.0001096"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTANEVEAVK"	"[K].mDSTANEVEAVk.[V]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"884.46332"	"1767.91936"	"1767.91989"	"-0.30"	"-0.00026"	"12/114"	"12"	"114"	"139310.929260254"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"51.1278"	"15797"	"15797"	"15767"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.9"	""	"8.4"	""	"14.7"	""	"25.4"	""	"16.8"	"13.5"	""	"1081"	"30"	"37.000"	"30.000"	"0.0516173492744586"	"23"	"0.005874"	"0.06689"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLHPSLEEEK"	"[R].dLLHPSLEEEk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P24051"	"40S ribosomal protein S27-like OS=Rattus norvegicus OX=10116 GN=Rps27l PE=1 SV=3"	"P24051"	"40S ribosomal protein S27-like OS=Rattus norvegicus OX=10116 GN=Rps27l PE=1 SV=3"	"0"	"3"	"3"	"0.6977"	"0.0000"	"1"	"1"	"1"	"590.00079"	"1767.98783"	"1767.98929"	"-0.83"	"-0.00049"	"11/98"	"11"	"98"	"1348552.61474609"	"HCD"	"MS2"	"2.004774"	"45.3"	"100.000"	"69.4245"	"23194"	"23194"	"23171"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.4"	""	"52.6"	""	"63.2"	""	"74.3"	""	"96.2"	"78.5"	""	"993"	"43"	"36.000"	"29.000"	"0.00224863648422148"	"28"	"0"	"0.00179"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLHPSLEEEK"	"[R].dLLHPSLEEEk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P24051"	"40S ribosomal protein S27-like OS=Rattus norvegicus OX=10116 GN=Rps27l PE=1 SV=3"	"P24051"	"40S ribosomal protein S27-like OS=Rattus norvegicus OX=10116 GN=Rps27l PE=1 SV=3"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"590.00085"	"1767.98801"	"1767.98929"	"-0.72"	"-0.00043"	"11/98"	"11"	"98"	"1437432.51397705"	"HCD"	"MS2"	"6.861941"	"43.7"	"100.000"	"69.2431"	"23134"	"23134"	"23116"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"64.6"	""	"54.2"	""	"58.1"	""	"71.7"	""	"85.8"	"82.7"	""	"981"	"44"	"36.000"	"29.000"	"0.00213127264956156"	"21"	"0"	"0.0003611"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEPPLPEEDLSK"	"[R].gEPPLPEEDLSk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"590.32849"	"1768.97092"	"1768.97330"	"-1.35"	"-0.00079"	"13/106"	"13"	"106"	"407698.404541016"	"HCD"	"MS2"	"19.97029"	"15.9"	"100.000"	"74.7644"	"25380"	"25380"	"25360"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.4"	""	"15.7"	""	"20.9"	""	"30.0"	""	"32.2"	"33.0"	""	"1006"	"45"	"37.000"	"30.000"	"0.00172015659584396"	"22"	"0"	"0.0003686"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEPPLPEEDLSK"	"[R].gEPPLPEEDLSk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"0"	"3"	"3"	"0.8140"	"0.0000"	"1"	"1"	"1"	"590.32880"	"1768.97184"	"1768.97330"	"-0.83"	"-0.00049"	"13/106"	"13"	"106"	"502973.869873047"	"HCD"	"MS2"	"16.25458"	"19.1"	"100.000"	"74.9848"	"25452"	"25452"	"25425"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.4"	""	"17.5"	""	"21.3"	""	"33.0"	""	"38.2"	"41.7"	""	"1021"	"43"	"37.000"	"30.000"	"0.002322714047066"	"23"	"0"	"0.0005312"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEPPLPEEDLSK"	"[R].gEPPLPEEDLSk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"0"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"590.32880"	"1768.97184"	"1768.97330"	"-0.83"	"-0.00049"	"13/106"	"13"	"106"	"446448.542785645"	"HCD"	"MS2"	"20.95368"	"18.0"	"100.000"	"75.4512"	"25641"	"25641"	"25611"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.4"	""	"18.7"	""	"17.8"	""	"38.6"	""	"35.3"	"35.7"	""	"1021"	"43"	"37.000"	"30.000"	"0.00286414991764577"	"22"	"0"	"0.0001797"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEPPLPEEDLSK"	"[R].gEPPLPEEDLSk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"590.32898"	"1768.97239"	"1768.97330"	"-0.52"	"-0.00031"	"12/106"	"12"	"106"	"485145.490112305"	"HCD"	"MS2"	"0"	"17.6"	"100.000"	"75.1410"	"25526"	"25526"	"25502"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.1"	""	"18.3"	""	"23.7"	""	"29.1"	""	"35.4"	"39.2"	""	"1007"	"40"	"37.000"	"30.000"	"0.00487527900627539"	"24"	"0"	"0.0008141"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSSNGFLIDGYPR"	"[K].vDSSnGFLIDGYPR.[E]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"885.44769"	"1769.88811"	"1769.89075"	"-1.49"	"-0.00132"	"7/138"	"7"	"138"	"159922.012756348"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"96.5121"	"33841"	"33841"	"33831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.6"	""	"9.7"	""	"9.6"	""	"9.4"	""	"10.2"	"16.0"	""	"890"	"42"	"36.000"	"29.000"	"0.00288642322928966"	"19"	"0"	"0.001349"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSSNGFLIDGYPR"	"[K].vDSSnGFLIDGYPR.[E]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"590.63452"	"1769.88901"	"1769.89075"	"-0.98"	"-0.00058"	"10/138"	"10"	"138"	"223330.646972656"	"HCD"	"MS2"	"37.27351"	"5.8"	"100.000"	"96.5002"	"33836"	"33836"	"33823"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.6"	""	"6.7"	""	"9.1"	""	"8.9"	""	"9.1"	"13.0"	""	"900"	"29"	"36.000"	"29.000"	"0.057044333963603"	"22"	"0"	"0.001923"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQDTAELFFEDVR"	"[K].aQDTAELFFEDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"885.44824"	"1769.88921"	"1769.89075"	"-0.87"	"-0.00077"	"5/134"	"5"	"134"	"225286.476989746"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"106.7953"	"37133"	"37133"	"37124"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.7"	""	"13.1"	""	"12.4"	""	"9.9"	""	"15.2"	"15.4"	""	"901"	"28"	"36.000"	"29.000"	"0.0702578402523542"	"16"	"0.0004639"	"0.007601"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSSNGFLIDGYPR"	"[K].vDSSnGFLIDGYPR.[E]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"590.63477"	"1769.88974"	"1769.89075"	"-0.57"	"-0.00033"	"13/138"	"13"	"138"	"226020.210083008"	"HCD"	"MS2"	"40.05211"	"4.9"	"100.000"	"96.4955"	"33855"	"33855"	"33846"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.5"	""	"6.1"	""	"4.6"	""	"9.8"	""	"7.3"	"13.2"	""	"901"	"34"	"36.000"	"29.000"	"0.0199386061749363"	"23"	"0"	"0.0001757"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQDTAELFFEDVR"	"[K].aQDTAELFFEDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"3"	"3"	"0.9605"	"0.0000"	"1"	"1"	"1"	"590.63495"	"1769.89029"	"1769.89075"	"-0.26"	"-0.00015"	"14/134"	"14"	"134"	"410873.442626953"	"HCD"	"MS2"	"11.42646"	"5.0"	"100.000"	"106.8258"	"37144"	"37144"	"37134"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.7"	""	"9.7"	""	"4.1"	""	"5.8"	""	"7.1"	"11.6"	""	"912"	"76"	"36.000"	"29.000"	"1.08884194500841E-06"	"20"	"0"	"1.502E-06"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQDTAELFFEDVR"	"[K].aQDTAELFFEDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"3"	"3"	"0.9195"	"0.0000"	"1"	"1"	"1"	"590.63501"	"1769.89048"	"1769.89075"	"-0.15"	"-0.00009"	"15/134"	"15"	"134"	"481177.151062012"	"HCD"	"MS2"	"18.20395"	"5.7"	"100.000"	"106.7880"	"37199"	"37199"	"37193"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.4"	""	"6.5"	""	"8.9"	""	"10.7"	""	"7.7"	"11.0"	""	"912"	"87"	"36.000"	"29.000"	"8.24071401460981E-08"	"25"	"0"	"9.642E-07"	"1.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQDTAELFFEDVR"	"[K].aQDTAELFFEDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"885.44904"	"1769.89079"	"1769.89075"	"0.03"	"0.00002"	"9/134"	"9"	"134"	"131424.381225586"	"HCD"	"MS2"	"0"	"7.2"	"100.000"	"106.7622"	"37190"	"37190"	"37181"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.8"	""	"10.7"	""	"8.8"	""	"11.2"	""	"14.5"	"12.3"	""	"906"	"20"	"36.000"	"29.000"	"0.437621048182386"	"15"	"0.000936"	"0.01184"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSSNGFLIDGYPR"	"[K].vDSSnGFLIDGYPR.[E]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"885.44904"	"1769.89079"	"1769.89075"	"0.03"	"0.00002"	"7/138"	"7"	"138"	"182665.925537109"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"96.4534"	"33839"	"33839"	"33833"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.6"	""	"16.4"	""	"10.8"	""	"13.3"	""	"12.0"	"23.6"	""	"906"	"37"	"36.000"	"29.000"	"0.00970729442307388"	"21"	"0"	"0.0003895"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEPGENSEILPSLK"	"[K].QEPGENSEILPSLk.[Y]"	"K14(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"885.47784"	"1769.94841"	"1769.94826"	"0.09"	"0.00008"	"4/150"	"4"	"150"	"108830.591186523"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"102.0885"	"35650"	"35650"	"35643"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.9"	""	"5.4"	""	"3.5"	""	"2.7"	""	"6.8"	"6.4"	""	"1037"	"12"	"37.000"	"30.000"	"3.06724707319983"	"21"	"0.006685"	"0.07557"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEPGENSEILPSLK"	"[K].QEPGENSEILPSLk.[Y]"	"K14(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"885.47827"	"1769.94927"	"1769.94826"	"0.57"	"0.00050"	"5/150"	"5"	"150"	"105179.700744629"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"102.2810"	"35762"	"35762"	"35758"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.4"	""	"3.9"	""	"4.3"	""	"3.5"	""	"8.7"	"3.5"	""	"1042"	"15"	"37.000"	"30.000"	"1.51299580297598"	"17"	"0.002547"	"0.02518"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEPGENSEILPSLK"	"[K].QEPGENSEILPSLk.[Y]"	"K14(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"885.48016"	"1769.95305"	"1769.94826"	"2.71"	"0.00240"	"5/150"	"5"	"150"	"105005.202270508"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"102.0233"	"35683"	"35683"	"35673"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.1"	""	"5.7"	""	"4.0"	""	"5.1"	""	""	"4.2"	""	"1052"	"13"	"37.000"	"30.000"	"2.71010267050004"	"16"	"0.005874"	"0.06578"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQFEDVTLYQGER"	"[K].gQFEDVTLYQGER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"885.94507"	"1770.88286"	"1770.88599"	"-1.77"	"-0.00157"	"15/134"	"15"	"134"	"338200.47467041"	"HCD"	"MS2"	"20.49357"	"24.2"	"100.000"	"76.0419"	"25881"	"25881"	"25855"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.3"	""	"39.1"	""	"25.5"	""	"40.2"	"0.4"	"45.6"	"42.6"	""	"811"	"48"	"36.000"	"29.000"	"0.000635317558928855"	"26"	"0"	"2.119E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQFEDVTLYQGER"	"[K].gQFEDVTLYQGER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"885.94543"	"1770.88359"	"1770.88599"	"-1.36"	"-0.00120"	"7/134"	"7"	"134"	"201866.666320801"	"HCD"	"MS2"	"0"	"16.4"	"100.000"	"75.8655"	"25819"	"25819"	"25792"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.4"	""	"22.1"	""	"17.8"	""	"33.9"	""	"30.2"	"25.6"	""	"811"	"12"	"36.000"	"29.000"	"2.349583364011"	"13"	"0.005119"	"0.0585"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQFEDVTLYQGER"	"[K].gQFEDVTLYQGER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"885.94550"	"1770.88371"	"1770.88599"	"-1.29"	"-0.00114"	"16/134"	"16"	"134"	"279975.245788574"	"HCD"	"MS2"	"0"	"20.7"	"100.000"	"76.1607"	"25938"	"25938"	"25924"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.7"	""	"26.9"	""	"14.3"	""	"45.6"	""	"42.1"	"35.0"	""	"809"	"33"	"36.000"	"29.000"	"0.0222289283475409"	"21"	"0"	"0.000424"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQFEDVTLYQGER"	"[K].gQFEDVTLYQGER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"590.96637"	"1770.88456"	"1770.88599"	"-0.81"	"-0.00048"	"11/134"	"11"	"134"	"432457.285827637"	"HCD"	"MS2"	"20.1304"	"11.2"	"100.000"	"76.3675"	"26013"	"26013"	"25992"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.4"	""	"13.3"	""	"16.9"	""	"15.2"	""	"23.9"	"25.4"	""	"819"	"38"	"36.000"	"29.000"	"0.00644545982998916"	"21"	"0"	"5.569E-05"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQFEDVTLYQGER"	"[K].gQFEDVTLYQGER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8723"	"0.0000"	"1"	"1"	"1"	"590.96643"	"1770.88474"	"1770.88599"	"-0.71"	"-0.00042"	"14/134"	"14"	"134"	"928927.652893066"	"HCD"	"MS2"	"12.13888"	"16.7"	"100.000"	"76.0396"	"25880"	"25880"	"25855"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.7"	""	"25.1"	""	"19.8"	""	"31.0"	""	"30.4"	"28.8"	""	"819"	"47"	"36.000"	"29.000"	"0.000782084909382875"	"21"	"0"	"3.015E-05"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQFEDVTLYQGER"	"[K].gQFEDVTLYQGER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8393"	"0.0000"	"1"	"1"	"1"	"590.96655"	"1770.88510"	"1770.88599"	"-0.50"	"-0.00030"	"14/134"	"14"	"134"	"1102079.23413086"	"HCD"	"MS2"	"29.29635"	"18.1"	"100.000"	"75.9281"	"25844"	"25844"	"25824"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.6"	""	"26.0"	""	"23.5"	""	"30.1"	""	"32.1"	"35.9"	""	"825"	"56"	"36.000"	"29.000"	"0.000107009898687401"	"25"	"0"	"1.913E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQFEDVTLYQGER"	"[K].gQFEDVTLYQGER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8644"	"0.0000"	"1"	"1"	"1"	"590.96661"	"1770.88529"	"1770.88599"	"-0.40"	"-0.00024"	"16/134"	"16"	"134"	"642799.057189941"	"HCD"	"MS2"	"8.568564"	"13.1"	"100.000"	"76.2232"	"25963"	"25963"	"25945"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.2"	""	"19.6"	""	"17.7"	""	"23.5"	""	"24.2"	"24.3"	""	"828"	"59"	"36.000"	"29.000"	"5.48277395570591E-05"	"24"	"0"	"2.046E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQFEDVTLYQGER"	"[K].gQFEDVTLYQGER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.7045"	"0.0000"	"1"	"1"	"1"	"885.94672"	"1770.88616"	"1770.88599"	"0.09"	"0.00008"	"8/134"	"8"	"134"	"106261.54486084"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"76.3720"	"26015"	"26015"	"25992"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.7"	""	"11.9"	""	"8.6"	""	"15.5"	""	"16.9"	"15.8"	""	"830"	"44"	"36.000"	"29.000"	"0.00152422154706705"	"28"	"0"	"0.0001212"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QHVPLDEYSANLR"	"[K].qHVPLDEYSANLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q711G3"	"Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2"	"Q711G3"	"Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"590.98224"	"1770.93216"	"1770.93361"	"-0.82"	"-0.00048"	"8/126"	"8"	"126"	"1209391.1270752"	"HCD"	"MS2"	"64.3424"	"34.1"	"100.000"	"55.4029"	"17539"	"17539"	"17511"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.4"	""	"36.7"	""	"41.7"	""	"62.7"	"2.3"	"66.1"	"62.9"	""	"1091"	"29"	"37.000"	"30.000"	"0.0691504092825454"	"20"	"0"	"0.0002851"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QHVPLDEYSANLR"	"[K].qHVPLDEYSANLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q711G3"	"Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2"	"Q711G3"	"Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"590.98248"	"1770.93290"	"1770.93361"	"-0.41"	"-0.00024"	"10/126"	"10"	"126"	"933809.992553711"	"HCD"	"MS2"	"7.790611"	"20.3"	"100.000"	"55.7369"	"17675"	"17675"	"17651"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.7"	""	"23.2"	""	"28.0"	""	"37.0"	""	"36.0"	"40.1"	""	"1090"	"34"	"37.000"	"30.000"	"0.0212029604021883"	"17"	"0"	"0.0001938"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QHVPLDEYSANLR"	"[K].qHVPLDEYSANLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q711G3"	"Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2"	"Q711G3"	"Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"590.98267"	"1770.93344"	"1770.93361"	"-0.09"	"-0.00006"	"10/126"	"10"	"126"	"1612516.65740967"	"HCD"	"MS2"	"35.33797"	"35.2"	"100.000"	"55.6883"	"17641"	"17641"	"17618"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.7"	""	"34.3"	""	"44.1"	""	"69.0"	""	"65.9"	"74.2"	""	"1087"	"36"	"37.000"	"30.000"	"0.0149348047221115"	"15"	"0"	"0.0001723"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEYQANGPEDLNR"	"[K].hEYQANGPEDLNR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"591.28931"	"1771.85337"	"1771.85609"	"-1.54"	"-0.00091"	"14/130"	"14"	"130"	"1491224.21038818"	"HCD"	"MS2"	"0"	"32.2"	"100.000"	"30.1822"	"7291"	"7291"	"7269"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.5"	""	"41.4"	""	"40.5"	""	"55.1"	""	"56.8"	"52.0"	""	"621"	"41"	"34.000"	"27.000"	"0.00247777350396707"	"15"	"0"	"1.645E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEYQANGPEDLNR"	"[K].hEYQANGPEDLNR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"591.29022"	"1771.85611"	"1771.85609"	"0.01"	"0.00001"	"10/130"	"10"	"130"	"1510545.3840332"	"HCD"	"MS2"	"0"	"29.1"	"100.000"	"30.1940"	"7284"	"7284"	"7263"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.2"	""	"33.3"	""	"41.5"	""	"48.1"	""	"54.9"	"50.3"	""	"621"	"57"	"34.000"	"27.000"	"6.7152410161724E-05"	"16"	"0"	"1.253E-06"	"1.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPEEEEILNK"	"[K].lTPEEEEILNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"887.00537"	"1773.00347"	"1773.00460"	"-0.64"	"-0.00057"	"7/92"	"7"	"92"	"192870.620849609"	"HCD"	"MS2"	"4.211184"	"14.2"	"100.000"	"94.2267"	"33017"	"33017"	"33012"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.1"	""	"15.2"	""	"16.9"	""	"26.7"	""	"27.7"	"22.9"	""	"1071"	"23"	"37.000"	"30.000"	"0.25748947109483"	"15"	"0.003189"	"0.03224"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPEEEEILNK"	"[K].lTPEEEEILNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"591.67279"	"1773.00382"	"1773.00460"	"-0.44"	"-0.00026"	"11/92"	"11"	"92"	"598010.312988281"	"HCD"	"MS2"	"15.13748"	"17.4"	"100.000"	"94.0086"	"32939"	"32939"	"32930"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.8"	""	"15.9"	""	"27.8"	""	"28.1"	""	"36.9"	"33.6"	""	"1071"	"37"	"37.000"	"30.000"	"0.011239823076804"	"19"	"0.0001301"	"0.004838"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPEEEEILNK"	"[K].lTPEEEEILNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"3"	"3"	"0.8810"	"0.0000"	"1"	"1"	"1"	"591.67279"	"1773.00382"	"1773.00460"	"-0.44"	"-0.00026"	"12/92"	"12"	"92"	"1108796.26525879"	"HCD"	"MS2"	"6.070453"	"32.7"	"100.000"	"94.2612"	"33028"	"33028"	"33025"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.1"	""	"36.4"	""	"43.9"	""	"65.0"	""	"63.3"	"54.9"	""	"1071"	"42"	"37.000"	"30.000"	"0.00324160038430721"	"20"	"0"	"0.002743"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPEEEEILNK"	"[K].lTPEEEEILNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"887.00555"	"1773.00383"	"1773.00460"	"-0.43"	"-0.00038"	"6/92"	"6"	"92"	"182678.952697754"	"HCD"	"MS2"	"5.19574"	"14.6"	"100.000"	"94.2318"	"33038"	"33038"	"33031"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.5"	""	"15.1"	""	"20.1"	""	"25.3"	""	"30.0"	"26.5"	""	"1071"	"38"	"37.000"	"30.000"	"0.00823681809882275"	"26"	"0"	"0.003732"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPEEEEILNK"	"[K].lTPEEEEILNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"591.67310"	"1773.00473"	"1773.00460"	"0.07"	"0.00004"	"12/92"	"12"	"92"	"731953.143920898"	"HCD"	"MS2"	"6.989569"	"21.3"	"100.000"	"93.9900"	"32950"	"32950"	"32943"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.9"	""	"21.7"	""	"25.9"	""	"41.4"	""	"44.4"	"39.0"	""	"1059"	"42"	"37.000"	"30.000"	"0.00368863739221652"	"24"	"0.0001301"	"0.004758"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPEEEEILNK"	"[K].lTPEEEEILNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"591.67310"	"1773.00473"	"1773.00460"	"0.07"	"0.00004"	"11/92"	"11"	"92"	"1165683.67669678"	"HCD"	"MS2"	"6.665672"	"32.3"	"100.000"	"94.2530"	"33046"	"33046"	"33042"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.8"	""	"37.1"	""	"34.6"	""	"59.1"	""	"77.4"	"54.1"	""	"1059"	"34"	"37.000"	"30.000"	"0.0198091556490052"	"22"	"0.001374"	"0.0163"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPEEEEILNK"	"[K].lTPEEEEILNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"887.00684"	"1773.00640"	"1773.00460"	"1.01"	"0.00090"	"4/92"	"4"	"92"	"82503.7518920898"	"HCD"	"MS2"	"11.69459"	"5.7"	"100.000"	"93.9734"	"32926"	"32926"	"32912"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.3"	""	"2.8"	""	"11.2"	""	"11.8"	""	"8.9"	"7.8"	""	"1014"	"11"	"37.000"	"30.000"	"3.6728903175802"	"16"	"0.008052"	"0.09801"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQGTYEDYVEGLR"	"[K].dQGTYEDYVEGLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"887.42749"	"1773.84770"	"1773.84927"	"-0.89"	"-0.00079"	"4/136"	"4"	"136"	"84200.8400268555"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"81.6667"	"28153"	"28153"	"28129"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.7"	""	"6.6"	""	"2.4"	""	"6.2"	""	"9.8"	"9.3"	""	"630"	"7"	"34.000"	"27.000"	"5.71887433773538"	"13"	"0.00912"	"0.1186"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTQINNSWGPEER"	"[R].nTQINNSWGPEER.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"P47967; P97840"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2; Galectin-9 OS=Rattus norvegicus OX=10116 GN=Lgals9 PE=2 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"887.43903"	"1773.87078"	"1773.87174"	"-0.54"	"-0.00048"	"11/140"	"11"	"140"	"452551.938598633"	"HCD"	"MS2"	"0"	"26.5"	"100.000"	"50.7181"	"15630"	"15630"	"15604"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"92.6"	""	"12.1"	""	"33.4"	""	"35.4"	""	"46.6"	"30.4"	""	"786"	"54"	"35.000"	"28.000"	"0.00017474008811536"	"24"	"0"	"3.607E-06"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTQINNSWGPEER"	"[R].nTQINNSWGPEER.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"P47967; P97840"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2; Galectin-9 OS=Rattus norvegicus OX=10116 GN=Lgals9 PE=2 SV=2"	"0"	"2"	"2"	"0.9400"	"0.0000"	"1"	"1"	"1"	"887.43945"	"1773.87163"	"1773.87174"	"-0.06"	"-0.00006"	"11/140"	"11"	"140"	"596447.330383301"	"HCD"	"MS2"	"22.4214"	"38.1"	"100.000"	"51.0315"	"15757"	"15757"	"15739"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"96.3"	""	"29.2"	""	"54.9"	""	"61.5"	""	"64.1"	"55.6"	""	"800"	"50"	"36.000"	"29.000"	"0.000409317196912302"	"18"	"0"	"2.261E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTQINNSWGPEER"	"[R].nTQINNSWGPEER.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"P47967; P97840"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2; Galectin-9 OS=Rattus norvegicus OX=10116 GN=Lgals9 PE=2 SV=2"	"0"	"2"	"2"	"0.8833"	"0.0000"	"1"	"1"	"1"	"887.43976"	"1773.87224"	"1773.87174"	"0.28"	"0.00025"	"9/140"	"9"	"140"	"671170.311828613"	"HCD"	"MS2"	"14.95424"	"41.8"	"100.000"	"51.3776"	"15887"	"15887"	"15869"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"118.4"	""	"30.4"	""	"61.7"	""	"53.0"	""	"81.0"	"51.9"	""	"794"	"60"	"35.000"	"28.000"	"4.37311105887942E-05"	"23"	"0"	"4.535E-06"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTQINNSWGPEER"	"[R].nTQINNSWGPEER.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"P47967; P97840"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2; Galectin-9 OS=Rattus norvegicus OX=10116 GN=Lgals9 PE=2 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"887.44031"	"1773.87334"	"1773.87174"	"0.90"	"0.00080"	"8/140"	"8"	"140"	"401726.313171387"	"HCD"	"MS2"	"0"	"25.7"	"100.000"	"51.0595"	"15758"	"15758"	"15730"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"81.0"	""	"12.1"	""	"38.9"	""	"38.9"	""	"42.9"	"29.0"	""	"797"	"48"	"36.000"	"29.000"	"0.000585367121641081"	"24"	"0"	"9.699E-05"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQSTDVAEEVYTR"	"[R].fQSTDVAEEVYTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"887.44495"	"1773.88262"	"1773.88566"	"-1.72"	"-0.00152"	"4/136"	"4"	"136"	"74780.9005126953"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"76.9224"	"26247"	"26247"	"26223"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.6"	""	"8.9"	""	"5.5"	""	"8.5"	""	"12.7"	"11.5"	""	"840"	"19"	"36.000"	"29.000"	"0.562664208718892"	"14"	"0.003653"	"0.03774"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQSTDVAEEVYTR"	"[R].fQSTDVAEEVYTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.9420"	"0.0000"	"1"	"1"	"1"	"887.44586"	"1773.88445"	"1773.88566"	"-0.68"	"-0.00061"	"12/136"	"12"	"136"	"411826.770812988"	"HCD"	"MS2"	"0"	"24.2"	"100.000"	"76.3320"	"26007"	"26007"	"25993"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.4"	""	"26.9"	""	"32.3"	""	"40.4"	""	"47.4"	"46.4"	""	"845"	"69"	"36.000"	"29.000"	"5.16210356419658E-06"	"21"	"0"	"1.18E-07"	"1.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQSTDVAEEVYTR"	"[R].fQSTDVAEEVYTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"591.96637"	"1773.88456"	"1773.88566"	"-0.62"	"-0.00037"	"15/136"	"15"	"136"	"1122706.97869873"	"HCD"	"MS2"	"13.87531"	"13.4"	"100.000"	"76.4783"	"26058"	"26058"	"26040"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.4"	""	"15.4"	""	"16.6"	""	"23.2"	""	"25.7"	"28.7"	""	"845"	"72"	"36.000"	"29.000"	"2.56937038040258E-06"	"19"	"0"	"2.729E-06"	"1.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQSTDVAEEVYTR"	"[R].fQSTDVAEEVYTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"591.96655"	"1773.88510"	"1773.88566"	"-0.31"	"-0.00018"	"14/136"	"14"	"136"	"698243.188110352"	"HCD"	"MS2"	"10.43919"	"11.7"	"100.000"	"76.3364"	"26009"	"26009"	"25993"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.1"	""	"19.1"	""	"14.6"	""	"19.5"	""	"18.4"	"24.2"	""	"844"	"66"	"36.000"	"29.000"	"1.00997924920308E-05"	"19"	"0"	"4.42E-06"	"0.98"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQSTDVAEEVYTR"	"[R].fQSTDVAEEVYTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.9877"	"0.0000"	"1"	"1"	"1"	"887.44623"	"1773.88518"	"1773.88566"	"-0.27"	"-0.00024"	"22/136"	"22"	"136"	"1152013.78375244"	"HCD"	"MS2"	"0"	"62.3"	"100.000"	"76.6089"	"26120"	"26120"	"26110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"98.5"	""	"57.4"	""	"68.4"	""	"105.4"	"2.3"	"139.1"	"120.8"	""	"844"	"81"	"36.000"	"29.000"	"3.41438469453277E-07"	"18"	"0"	"1.516E-07"	"1.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQSTDVAEEVYTR"	"[R].fQSTDVAEEVYTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.9403"	"0.0000"	"1"	"1"	"1"	"887.44635"	"1773.88542"	"1773.88566"	"-0.13"	"-0.00012"	"9/136"	"9"	"136"	"1022236.6229248"	"HCD"	"MS2"	"0"	"54.2"	"100.000"	"76.7209"	"26157"	"26157"	"26148"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"73.6"	""	"59.0"	""	"60.2"	""	"107.0"	"1.2"	"112.0"	"101.6"	""	"844"	"67"	"36.000"	"29.000"	"8.85752630889127E-06"	"20"	"0"	"6.002E-07"	"1.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQSTDVAEEVYTR"	"[R].fQSTDVAEEVYTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.9877"	"0.0000"	"1"	"1"	"1"	"887.44659"	"1773.88591"	"1773.88566"	"0.14"	"0.00013"	"10/136"	"10"	"136"	"568084.735717773"	"HCD"	"MS2"	"0"	"35.2"	"100.000"	"76.4460"	"26045"	"26045"	"26024"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.3"	""	"45.0"	""	"37.3"	""	"63.1"	""	"74.2"	"65.1"	""	"834"	"81"	"36.000"	"29.000"	"3.19253785081994E-07"	"18"	"0"	"9.054E-08"	"1.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDFAVESYENK"	"[K].nDFAVESYENk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"591.97266"	"1773.90342"	"1773.90595"	"-1.43"	"-0.00084"	"8/114"	"8"	"114"	"546299.498352051"	"HCD"	"MS2"	"28.43723"	"21.9"	"100.000"	"70.7274"	"23725"	"23725"	"23701"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.0"	""	"22.5"	""	"30.3"	""	"32.8"	"1.3"	"46.0"	"38.4"	""	"943"	"20"	"36.000"	"29.000"	"0.52177311414547"	"14"	"0.004205"	"0.0461"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDFAVESYENK"	"[K].nDFAVESYENk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"591.97308"	"1773.90470"	"1773.90595"	"-0.71"	"-0.00042"	"10/114"	"10"	"114"	"534628.766601563"	"HCD"	"MS2"	"33.39427"	"20.0"	"100.000"	"70.6173"	"23694"	"23694"	"23672"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.7"	""	"22.2"	""	"25.9"	""	"33.7"	"0.9"	"38.2"	"40.3"	""	"950"	"31"	"36.000"	"29.000"	"0.0358668808141081"	"18"	"0"	"0.001264"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHSGTLGPEEFK"	"[R].dHSGTLGPEEFk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"3"	"3"	"0.9268"	"0.0000"	"1"	"1"	"1"	"592.31720"	"1774.93705"	"1774.93758"	"-0.30"	"-0.00018"	"14/106"	"14"	"106"	"2144629.58666992"	"HCD"	"MS2"	"19.62595"	"71.1"	"100.000"	"54.0538"	"16980"	"16980"	"16960"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"101.0"	""	"72.4"	""	"81.9"	""	"115.8"	""	"161.5"	"143.7"	""	"1071"	"41"	"37.000"	"30.000"	"0.00470716557762938"	"18"	"0"	"2.061E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHSGTLGPEEFK"	"[R].dHSGTLGPEEFk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"592.31744"	"1774.93778"	"1774.93758"	"0.11"	"0.00006"	"12/106"	"12"	"106"	"1881251.50708008"	"HCD"	"MS2"	"10.45707"	"59.6"	"100.000"	"53.8668"	"16915"	"16915"	"16892"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.9"	""	"60.5"	""	"60.8"	""	"107.3"	""	"140.8"	"123.0"	""	"1059"	"35"	"37.000"	"30.000"	"0.0168215482040906"	"20"	"0"	"4.042E-05"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETPAASEAPSSAAK"	"[K].eTPAASEAPSSAAk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q05175"	"Brain acid soluble protein 1 OS=Rattus norvegicus OX=10116 GN=Basp1 PE=1 SV=2"	"Q05175"	"Brain acid soluble protein 1 OS=Rattus norvegicus OX=10116 GN=Basp1 PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"887.98267"	"1774.95806"	"1774.95871"	"-0.37"	"-0.00033"	"4/124"	"4"	"124"	"96512.06640625"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"38.7198"	"10739"	"10739"	"10715"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.9"	""	"5.2"	""	"1.6"	""	"15.3"	""	"13.3"	"8.9"	""	"1100"	"14"	"37.000"	"30.000"	"2.12013096716174"	"14"	"0.00447"	"0.04719"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETPAASEAPSSAAK"	"[K].eTPAASEAPSSAAk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q05175"	"Brain acid soluble protein 1 OS=Rattus norvegicus OX=10116 GN=Basp1 PE=1 SV=2"	"Q05175"	"Brain acid soluble protein 1 OS=Rattus norvegicus OX=10116 GN=Basp1 PE=1 SV=2"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"887.98297"	"1774.95867"	"1774.95871"	"-0.03"	"-0.00002"	"8/124"	"8"	"124"	"84244.9769897461"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"38.4613"	"10643"	"10643"	"10613"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.6"	""	"4.4"	""	"4.1"	""	"15.3"	""	"15.0"	"10.8"	""	"1096"	"19"	"37.000"	"30.000"	"0.678860529418642"	"17"	"0.001374"	"0.01632"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEHNVSPGYNFR"	"[R].dLEHNVSPGYNFR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P51577"	"P2X purinoceptor 4 OS=Rattus norvegicus OX=10116 GN=P2rx4 PE=1 SV=1"	"P51577"	"P2X purinoceptor 4 OS=Rattus norvegicus OX=10116 GN=P2rx4 PE=1 SV=1"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"592.96680"	"1776.88584"	"1776.88666"	"-0.46"	"-0.00028"	"10/124"	"10"	"124"	"2099228.60662842"	"HCD"	"MS2"	"21.36292"	"32.6"	"100.000"	"56.3935"	"17943"	"17943"	"17926"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.9"	""	"39.8"	""	"40.1"	""	"67.9"	""	"56.5"	"63.1"	""	"847"	"34"	"36.000"	"29.000"	"0.0163250084471454"	"16"	"0"	"3.434E-05"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEHNVSPGYNFR"	"[R].dLEHNVSPGYNFR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P51577"	"P2X purinoceptor 4 OS=Rattus norvegicus OX=10116 GN=P2rx4 PE=1 SV=1"	"P51577"	"P2X purinoceptor 4 OS=Rattus norvegicus OX=10116 GN=P2rx4 PE=1 SV=1"	"0"	"3"	"3"	"0.3684"	"0.0000"	"1"	"1"	"1"	"592.96686"	"1776.88602"	"1776.88666"	"-0.36"	"-0.00021"	"4/124"	"4"	"124"	"1877651.40307617"	"HCD"	"MS2"	"17.8676"	"31.9"	"100.000"	"56.5568"	"17995"	"17995"	"17972"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.6"	""	"40.7"	""	"39.2"	""	"53.7"	"1.0"	"61.1"	"69.1"	""	"846"	"19"	"36.000"	"29.000"	"0.480109575029389"	"25"	"0"	"0.0005926"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLEQGWQADSTTR"	"[K].gVLEQGWQADSTTR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P4Z9"	"COP9 signalosome complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Cops8 PE=2 SV=1"	"Q6P4Z9"	"COP9 signalosome complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Cops8 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"888.95673"	"1776.90618"	"1776.90779"	"-0.91"	"-0.00081"	"5/140"	"5"	"140"	"92300.9927368164"	"HCD"	"MS2"	"18.49389"	"6.7"	"100.000"	"66.7599"	"22123"	"22123"	"22093"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.3"	""	"6.8"	""	"9.7"	""	"10.9"	""	"14.7"	"13.6"	""	"953"	"22"	"36.000"	"29.000"	"0.336560314606301"	"14"	"0.0001301"	"0.004334"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLEQGWQADSTTR"	"[K].gVLEQGWQADSTTR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P4Z9"	"COP9 signalosome complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Cops8 PE=2 SV=1"	"Q6P4Z9"	"COP9 signalosome complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Cops8 PE=2 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"888.95734"	"1776.90740"	"1776.90779"	"-0.22"	"-0.00020"	"6/140"	"6"	"140"	"99226.4923706055"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"66.8510"	"22145"	"22145"	"22116"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.9"	""	"6.8"	""	"5.3"	""	"12.2"	""	"12.1"	"15.3"	""	"956"	"23"	"36.000"	"29.000"	"0.261473630263318"	"24"	"0"	"0.0009206"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPEDESTPEKR"	"[K].mPEDESTPEkR.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"3"	"P62749"	"Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"Q5PQN0; P84076; P62749"	"Neurocalcin-delta OS=Rattus norvegicus OX=10116 GN=Ncald PE=1 SV=3; Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2; Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.97815"	"1776.91989"	"1776.92022"	"-0.18"	"-0.00011"	"16/94"	"16"	"94"	"2235458.34020996"	"HCD"	"MS2"	"6.175833"	"91.5"	"100.000"	"36.5333"	"9856"	"9856"	"9832"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"155.1"	""	"95.0"	""	"109.7"	""	"120.5"	""	"198.4"	"191.3"	""	"1028"	"13"	"37.000"	"30.000"	"2.50013303725411"	"13"	"0.0008629"	"0.01081"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPEDESTPEKR"	"[K].mPEDESTPEkR.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"3"	"P62749"	"Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"Q5PQN0; P84076; P62749"	"Neurocalcin-delta OS=Rattus norvegicus OX=10116 GN=Ncald PE=1 SV=3; Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2; Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.97845"	"1776.92081"	"1776.92022"	"0.33"	"0.00020"	"7/94"	"7"	"94"	"2328545.871521"	"HCD"	"MS2"	"25.59305"	"94.1"	"100.000"	"36.3234"	"9777"	"9777"	"9759"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"138.0"	""	"113.0"	""	"101.9"	""	"141.6"	""	"200.6"	"201.8"	""	"1025"	"4"	"37.000"	"30.000"	"21.1199978537382"	"13"	"0.0023"	"0.02391"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVTEQGAELSNEER"	"[K].sVTEQGAELSNEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"889.44067"	"1777.87407"	"1777.87655"	"-1.40"	"-0.00124"	"15/146"	"15"	"146"	"156026.035400391"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"42.1713"	"12154"	"12154"	"12124"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.9"	""	"10.1"	""	"9.5"	""	"15.0"	""	"17.1"	"17.0"	""	"743"	"51"	"35.000"	"28.000"	"0.000293061533695293"	"26"	"0"	"8.489E-06"	"0.918"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVTEQGAELSNEER"	"[K].sVTEQGAELSNEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"889.44104"	"1777.87480"	"1777.87655"	"-0.98"	"-0.00087"	"6/146"	"6"	"146"	"99592.4293212891"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"42.2454"	"12174"	"12174"	"12145"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.0"	""	"4.3"	""	"6.3"	""	"15.7"	""	"12.1"	"14.9"	""	"739"	"19"	"35.000"	"28.000"	"0.416499460056851"	"16"	"0"	"0.003121"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPPATDPGPVPSSPR"	"[R].sSPPATDPGPVPSSPR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q499N6"	"UBX domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ubxn1 PE=3 SV=2"	"Q499N6"	"UBX domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ubxn1 PE=3 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"889.46552"	"1777.92375"	"1777.92819"	"-2.50"	"-0.00222"	"5/146"	"5"	"146"	"124977.826965332"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"42.6843"	"12353"	"12353"	"12322"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.9"	""	"6.5"	""	"5.9"	""	"8.0"	""	"9.9"	"8.8"	""	"1061"	"6"	"37.000"	"30.000"	"12.9325863914463"	"13"	"0.0023"	"0.02411"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPPATDPGPVPSSPR"	"[R].sSPPATDPGPVPSSPR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q499N6"	"UBX domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ubxn1 PE=3 SV=2"	"Q499N6"	"UBX domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ubxn1 PE=3 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"889.46661"	"1777.92595"	"1777.92819"	"-1.26"	"-0.00112"	"5/146"	"5"	"146"	"120544.729125977"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"42.5207"	"12297"	"12297"	"12268"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.2"	""	"4.3"	""	"8.7"	""	"6.9"	""	"8.6"	"12.3"	""	"1063"	"3"	"37.000"	"30.000"	"29.6144225557321"	"13"	"0.003507"	"0.03587"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGFNATEDAQVLR"	"[K].aASGFNATEDAQVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"889.96106"	"1778.91484"	"1778.92344"	"-4.83"	"-0.00430"	"19/144"	"19"	"144"	"425867.871459961"	"HCD"	"MS2"	"0"	"24.7"	"100.000"	"67.8500"	"22552"	"22552"	"22526"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.4"	""	"36.8"	""	"37.1"	""	"36.8"	""	"42.0"	"45.9"	""	"965"	"50"	"36.000"	"29.000"	"0.000513449006293233"	"16"	"0"	"5.949E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGFNATEDAQVLR"	"[K].aASGFNATEDAQVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.9450"	"0.0000"	"1"	"1"	"1"	"889.96448"	"1778.92168"	"1778.92344"	"-0.99"	"-0.00088"	"14/144"	"14"	"144"	"1835313.99926758"	"HCD"	"MS2"	"0"	"87.0"	"100.000"	"67.9984"	"22627"	"22627"	"22610"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"140.6"	""	"116.9"	""	"130.7"	""	"137.9"	""	"146.4"	"150.2"	""	"988"	"109"	"36.000"	"29.000"	"5.87120100353888E-10"	"26"	"0"	"5.803E-10"	"1.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGFNATEDAQVLR"	"[K].aASGFNATEDAQVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.9296"	"0.0000"	"1"	"1"	"1"	"593.64551"	"1778.92197"	"1778.92344"	"-0.83"	"-0.00049"	"13/144"	"13"	"144"	"1916155.35473633"	"HCD"	"MS2"	"17.80578"	"23.3"	"100.000"	"67.8777"	"22563"	"22563"	"22542"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.7"	""	"29.5"	""	"33.3"	""	"35.2"	""	"48.7"	"44.2"	""	"987"	"71"	"36.000"	"29.000"	"4.3180449307474E-06"	"22"	"0"	"4.123E-06"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGFNATEDAQVLR"	"[K].aASGFNATEDAQVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"593.64551"	"1778.92197"	"1778.92344"	"-0.83"	"-0.00049"	"14/144"	"14"	"144"	"4105911.03662109"	"HCD"	"MS2"	"3.56399"	"34.1"	"100.000"	"68.0376"	"22643"	"22643"	"22626"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.8"	""	"38.6"	""	"49.1"	""	"54.5"	"0.2"	"67.4"	"62.5"	""	"987"	"78"	"36.000"	"29.000"	"8.65540027658908E-07"	"20"	"0"	"1.117E-07"	"1.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGFNATEDAQVLR"	"[K].aASGFNATEDAQVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"593.64563"	"1778.92234"	"1778.92344"	"-0.62"	"-0.00037"	"16/144"	"16"	"144"	"1968720.80169678"	"HCD"	"MS2"	"7.481721"	"20.3"	"100.000"	"67.7468"	"22524"	"22524"	"22513"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.2"	""	"28.7"	""	"28.8"	""	"35.0"	""	"41.3"	"34.2"	""	"988"	"74"	"36.000"	"29.000"	"1.8102016187603E-06"	"21"	"0"	"4.518E-07"	"1.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGFNATEDAQVLR"	"[K].aASGFNATEDAQVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"889.96503"	"1778.92278"	"1778.92344"	"-0.37"	"-0.00033"	"6/144"	"6"	"144"	"83788.2495117188"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"68.3119"	"22754"	"22754"	"22735"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.7"	""	"4.8"	""	"7.5"	""	"9.0"	""	"12.6"	"9.7"	""	"992"	"9"	"36.000"	"29.000"	"5.90856035981578"	"13"	"0.0023"	"0.02424"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGFNATEDAQVLR"	"[K].aASGFNATEDAQVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.9868"	"0.0000"	"1"	"1"	"1"	"593.64587"	"1778.92307"	"1778.92344"	"-0.21"	"-0.00012"	"15/144"	"15"	"144"	"4317104.67913818"	"HCD"	"MS2"	"4.859832"	"32.8"	"100.000"	"68.1658"	"22680"	"22680"	"22663"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.3"	""	"40.4"	""	"47.2"	""	"60.0"	"0.7"	"65.4"	"53.1"	""	"997"	"76"	"36.000"	"29.000"	"1.2041072259708E-06"	"18"	"0"	"3.6E-07"	"1.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGFNATEDAQVLR"	"[K].aASGFNATEDAQVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"889.96527"	"1778.92327"	"1778.92344"	"-0.10"	"-0.00009"	"16/144"	"16"	"144"	"302921.376953125"	"HCD"	"MS2"	"0"	"18.1"	"100.000"	"67.6984"	"22505"	"22505"	"22486"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.4"	""	"28.4"	""	"29.6"	""	"29.1"	""	"32.8"	"27.0"	""	"999"	"42"	"36.000"	"29.000"	"0.00344774782018201"	"17"	"0"	"1.251E-05"	"0.882"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGFNATEDAQVLR"	"[K].aASGFNATEDAQVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.9533"	"0.0000"	"1"	"1"	"1"	"889.96527"	"1778.92327"	"1778.92344"	"-0.10"	"-0.00009"	"14/144"	"14"	"144"	"1513065.20544434"	"HCD"	"MS2"	"0"	"77.1"	"100.000"	"68.1614"	"22679"	"22679"	"22663"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"113.9"	""	"111.9"	""	"118.0"	""	"126.2"	""	"130.4"	"129.5"	""	"999"	"107"	"36.000"	"29.000"	"9.36559756779674E-10"	"25"	"0"	"3.699344E-11"	"2.08318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDKPDMAEIEK"	"[M].sDkPDmAEIEk.[F]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); M6(Oxidation); K11(TMT6plex)"	"1"	"1"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"0"	"3"	"3"	"0.7105"	"0.0000"	"1"	"1"	"1"	"593.64594"	"1778.92325"	"1778.92464"	"-0.78"	"-0.00046"	"9/114"	"9"	"114"	"1459186.95343018"	"HCD"	"MS2"	"35.88761"	"54.4"	"100.000"	"52.5924"	"16383"	"16383"	"16361"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.1"	""	"53.0"	""	"57.3"	""	"103.6"	""	"128.5"	"113.5"	""	"999"	"38"	"36.000"	"29.000"	"0.00761264350521746"	"25"	"0.001886"	"0.02097"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDKPDMAEIEK"	"[M].sDkPDmAEIEk.[F]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); M6(Oxidation); K11(TMT6plex)"	"1"	"1"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"889.96588"	"1778.92449"	"1778.92464"	"-0.09"	"-0.00008"	"8/114"	"8"	"114"	"389623.951171875"	"HCD"	"MS2"	"0"	"32.6"	"100.000"	"52.4152"	"16311"	"16311"	"16284"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.6"	""	"22.5"	""	"26.2"	""	"85.8"	""	"74.7"	"62.1"	""	"1049"	"24"	"37.000"	"30.000"	"0.210739280290269"	"19"	"0.008478"	"0.1032"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEVINQPMMMAAR"	"[K].aGEVINQPMmmAAR.[Q]"	"N-Term(TMT6plex); M10(Oxidation); M11(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"1"	"890.43970"	"1779.87212"	"1779.87531"	"-1.79"	"-0.00160"	"6/120"	"6"	"120"	"178100.669128418"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"50.9460"	"15723"	"15723"	"15699"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.3"	""	"9.6"	""	"8.1"	""	"26.6"	""	"23.2"	"19.4"	""	"700"	"9"	"35.000"	"28.000"	"4.45726078355832"	"21"	"0.001374"	"0.01658"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEVINQPMMMAAR"	"[K].aGEVINQPmMmAAR.[Q]"	"N-Term(TMT6plex); M9(Oxidation); M11(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"2"	"2"	"890.43970"	"1779.87212"	"1779.87531"	"-1.79"	"-0.00160"	"6/120"	"6"	"120"	"178100.669128418"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"50.9460"	"15723"	"15723"	"15699"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.3"	""	"9.6"	""	"8.1"	""	"26.6"	""	"23.2"	"19.4"	""	"700"	"9"	"35.000"	"28.000"	"4.45726078355832"	"21"	"0.001374"	"0.01658"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGFNATEDAQVLR"	"[K].aASGFnATEDAQVLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"890.45593"	"1779.90459"	"1779.90746"	"-1.61"	"-0.00143"	"7/144"	"7"	"144"	"166055.816894531"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"71.9994"	"24257"	"24257"	"24230"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.0"	""	"17.0"	""	"14.7"	""	"22.4"	""	"17.9"	"13.1"	""	"906"	"31"	"36.000"	"29.000"	"0.0400957371253369"	"26"	"0"	"0.003502"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGFNATEDAQVLR"	"[K].aASGFnATEDAQVLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.7736"	"0.0000"	"1"	"1"	"1"	"890.45709"	"1779.90691"	"1779.90746"	"-0.31"	"-0.00028"	"8/144"	"8"	"144"	"151457.243530273"	"HCD"	"MS2"	"14.67089"	"9.4"	"100.000"	"72.1602"	"24309"	"24309"	"24282"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.1"	""	"14.6"	""	"7.7"	""	"19.5"	""	"17.2"	"18.1"	""	"926"	"53"	"36.000"	"29.000"	"0.000237454820788002"	"23"	"0"	"3.761E-05"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSMNPEYDYLFK"	"[M].sSmNPEYDYLFk.[L]"	"N-Term(Prot)(Acetyl); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"890.91815"	"1780.82903"	"1780.83012"	"-0.61"	"-0.00055"	"7/118"	"7"	"118"	"196827.606323242"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"107.5750"	"37421"	"37421"	"37409"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.0"	""	"11.2"	""	"9.4"	""	"22.0"	""	"9.5"	"14.4"	""	"449"	"48"	"33.000"	"26.000"	"0.00035173561523928"	"19"	"0"	"0.002131"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSMNPEYDYLFK"	"[M].sSmNPEYDYLFk.[L]"	"N-Term(Prot)(Acetyl); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"890.91919"	"1780.83110"	"1780.83012"	"0.55"	"0.00049"	"6/118"	"6"	"118"	"215179.870239258"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"107.5363"	"37483"	"37483"	"37469"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.9"	""	"10.0"	""	"14.0"	""	"25.1"	""	"21.5"	"15.6"	""	"457"	"29"	"33.000"	"26.000"	"0.0303309633591246"	"16"	"0.0003538"	"0.006642"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGDTGMLPANYVEAI"	"[R].tGDTGMLPANYVEAI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"890.95270"	"1780.89812"	"1780.89887"	"-0.42"	"-0.00037"	"4/136"	"4"	"136"	"76876.9602661133"	"HCD"	"MS2"	"0"	"0.3"	"100.000"	"109.6464"	"38173"	"38173"	"38170"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	"2.8"	""	""	""	""	""	""	"940"	"3"	"36.000"	"29.000"	"23.6101017075522"	"13"	"0.006769"	"0.07721"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGDTGMLPANYVEAI"	"[R].tGDTGMLPANYVEAI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"890.95270"	"1780.89812"	"1780.89887"	"-0.42"	"-0.00037"	"5/136"	"5"	"136"	"159747.587402344"	"HCD"	"MS2"	"0"	"0.3"	"100.000"	"109.6014"	"38257"	"38257"	"38252"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	""	""	"2.9"	""	""	""	""	""	""	"940"	"19"	"36.000"	"29.000"	"0.542123031175913"	"14"	"0.00413"	"0.04518"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLSEDTTEETLK"	"[K].gLSEDTTEETLk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"3"	"3"	"0.7917"	"0.0000"	"1"	"1"	"1"	"594.32391"	"1780.95719"	"1780.95805"	"-0.48"	"-0.00029"	"8/102"	"8"	"102"	"1967305.24249268"	"HCD"	"MS2"	"10.69347"	"53.8"	"100.000"	"63.0313"	"20609"	"20609"	"20589"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.9"	""	"43.5"	""	"46.8"	""	"119.2"	""	"127.8"	"129.2"	""	"1116"	"48"	"37.000"	"30.000"	"0.000819660862925278"	"25"	"0"	"0.0001027"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLSEDTTEETLK"	"[K].gLSEDTTEETLk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"890.98242"	"1780.95757"	"1780.95805"	"-0.27"	"-0.00024"	"9/102"	"9"	"102"	"191405.160766602"	"HCD"	"MS2"	"0"	"21.9"	"100.000"	"63.2475"	"20697"	"20697"	"20678"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.1"	""	"14.9"	""	"16.8"	""	"49.5"	""	"55.6"	"55.3"	""	"1116"	"15"	"37.000"	"30.000"	"1.82236010352163"	"22"	"0.00447"	"0.04884"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLSEDTTEETLK"	"[K].gLSEDTTEETLk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"3"	"3"	"0.7436"	"0.0000"	"1"	"1"	"1"	"594.32410"	"1780.95774"	"1780.95805"	"-0.17"	"-0.00010"	"11/102"	"11"	"102"	"1763225.36779785"	"HCD"	"MS2"	"10.09304"	"52.6"	"100.000"	"63.1181"	"20629"	"20629"	"20614"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.6"	""	"41.1"	""	"41.7"	""	"114.5"	"0.5"	"127.3"	"125.0"	""	"1116"	"39"	"37.000"	"30.000"	"0.00780969725995521"	"25"	"0"	"0.0002236"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLSEDTTEETLK"	"[K].gLSEDTTEETLk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"890.98260"	"1780.95793"	"1780.95805"	"-0.06"	"-0.00006"	"14/102"	"14"	"102"	"189933.408996582"	"HCD"	"MS2"	"0"	"20.3"	"100.000"	"63.3784"	"20735"	"20735"	"20715"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.0"	""	"13.7"	""	"14.4"	""	"43.1"	""	"56.4"	"51.1"	""	"1116"	"51"	"37.000"	"30.000"	"0.000491625271138472"	"22"	"0"	"0.000292"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLSEDTTEETLK"	"[K].gLSEDTTEETLk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.7719"	"0.0000"	"1"	"1"	"1"	"890.98267"	"1780.95806"	"1780.95805"	"0.01"	"0.00001"	"9/102"	"9"	"102"	"469175.154296875"	"HCD"	"MS2"	"0"	"45.1"	"100.000"	"63.0648"	"20608"	"20608"	"20583"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.3"	""	"27.0"	""	"39.4"	""	"111.6"	"0.9"	"105.8"	"103.5"	""	"1115"	"57"	"37.000"	"30.000"	"0.000123664450403862"	"29"	"0"	"5.349E-06"	"0.962"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLSEDTTEETLK"	"[K].gLSEDTTEETLk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.8254"	"0.0000"	"1"	"1"	"1"	"890.98303"	"1780.95879"	"1780.95805"	"0.42"	"0.00037"	"17/102"	"17"	"102"	"463114.759765625"	"HCD"	"MS2"	"0"	"45.3"	"100.000"	"62.9526"	"20578"	"20578"	"20551"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.6"	""	"30.5"	""	"36.9"	""	"101.0"	"0.4"	"122.0"	"106.5"	""	"1116"	"63"	"37.000"	"30.000"	"2.85518464231492E-05"	"28"	"0"	"5.668E-07"	"1.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPMTVSSDQMAK"	"[K].ePMTVSSDQMAk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"891.46143"	"1781.91557"	"1781.91778"	"-1.24"	"-0.00110"	"16/108"	"16"	"108"	"287178.724975586"	"HCD"	"MS2"	"0"	"24.0"	"100.000"	"58.7496"	"18904"	"18904"	"18879"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.6"	""	"9.8"	""	"16.7"	""	"19.7"	""	"25.6"	"107.3"	""	"1041"	"45"	"37.000"	"30.000"	"0.00153964548884008"	"15"	"0"	"0.0002009"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPMTVSSDQMAK"	"[K].ePMTVSSDQMAk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.9592"	"0.0000"	"1"	"1"	"1"	"891.46295"	"1781.91863"	"1781.91778"	"0.48"	"0.00042"	"15/108"	"15"	"108"	"241509.798339844"	"HCD"	"MS2"	"31.7006"	"21.9"	"100.000"	"58.9379"	"18966"	"18966"	"18936"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.8"	""	"13.1"	""	"10.8"	""	"14.5"	""	"18.5"	"105.3"	""	"1049"	"49"	"37.000"	"30.000"	"0.000610584102425802"	"18"	"0"	"8.854E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQAHGADELLK"	"[K].eLQAHGADELLk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.67712"	"1782.01682"	"1782.01617"	"0.36"	"0.00022"	"12/122"	"12"	"122"	"1523602.89788818"	"HCD"	"MS2"	"33.59201"	"48.4"	"100.000"	"63.7699"	"20895"	"20895"	"20875"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"68.9"	""	"61.0"	""	"54.3"	""	"83.9"	""	"101.5"	"93.0"	""	"910"	"22"	"36.000"	"29.000"	"0.281845689159936"	"14"	"0"	"0.0001754"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPIMPAPGQEETVR"	"[K].ePIMPAPGQEETVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"891.96576"	"1782.92424"	"1782.92575"	"-0.85"	"-0.00075"	"10/136"	"10"	"136"	"265447.438720703"	"HCD"	"MS2"	"0"	"10.1"	"100.000"	"62.6971"	"20474"	"20474"	"20449"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.6"	""	"14.3"	""	"13.2"	""	"12.3"	""	"21.2"	"20.7"	""	"1073"	"41"	"37.000"	"30.000"	"0.00388659892580232"	"19"	"0"	"0.0001305"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPIMPAPGQEETVR"	"[K].ePIMPAPGQEETVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.97968"	"1782.92447"	"1782.92575"	"-0.72"	"-0.00043"	"15/136"	"15"	"136"	"1067532.05194092"	"HCD"	"MS2"	"31.85147"	"29.6"	"100.000"	"62.8306"	"20528"	"20528"	"20510"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.9"	""	"41.7"	""	"33.8"	""	"52.6"	""	"49.0"	"70.0"	""	"1074"	"25"	"37.000"	"30.000"	"0.152045750174427"	"14"	"0"	"0.0004199"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPIMPAPGQEETVR"	"[K].ePIMPAPGQEETVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"891.96606"	"1782.92485"	"1782.92575"	"-0.50"	"-0.00045"	"9/136"	"9"	"136"	"193165.799682617"	"HCD"	"MS2"	"0"	"7.2"	"100.000"	"62.3772"	"20344"	"20344"	"20313"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.7"	""	"6.9"	""	"9.0"	""	"9.4"	""	"16.9"	"17.0"	""	"1074"	"21"	"37.000"	"30.000"	"0.472035091538185"	"22"	"0.0001301"	"0.004835"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPIMPAPGQEETVR"	"[K].ePIMPAPGQEETVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"891.96667"	"1782.92607"	"1782.92575"	"0.18"	"0.00016"	"10/136"	"10"	"136"	"330091.924377441"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"62.7126"	"20464"	"20464"	"20442"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.1"	""	"12.3"	""	"15.5"	""	"17.0"	"0.7"	"26.0"	"31.7"	""	"1057"	"41"	"37.000"	"30.000"	"0.00463494933974411"	"22"	"0"	"0.0003461"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPIMPAPGQEETVR"	"[K].ePIMPAPGQEETVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"891.96747"	"1782.92766"	"1782.92575"	"1.07"	"0.00095"	"4/136"	"4"	"136"	"182216.321960449"	"HCD"	"MS2"	"100"	"6.7"	"100.000"	"62.4137"	"20343"	"20343"	"20315"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.9"	""	"8.0"	""	"12.8"	""	"9.0"	""	"14.0"	"11.0"	""	"1057"	"12"	"37.000"	"30.000"	"3.44385606261156"	"20"	"0.0001301"	"0.004154"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPGTPAGEGSGSPPK"	"[R].sPGTPAGEGSGSPPk.[W]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"892.48218"	"1783.95708"	"1783.95905"	"-1.10"	"-0.00098"	"6/134"	"6"	"134"	"123882.458862305"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"35.5522"	"9464"	"9464"	"9447"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.2"	""	"12.0"	""	"8.7"	""	"9.2"	""	"9.6"	"7.8"	""	"1029"	"34"	"37.000"	"30.000"	"0.0203416126025052"	"15"	"0"	"0.003276"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPGTPAGEGSGSPPK"	"[R].sPGTPAGEGSGSPPk.[W]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.9818"	"0.0000"	"1"	"1"	"1"	"892.48285"	"1783.95842"	"1783.95905"	"-0.35"	"-0.00031"	"9/134"	"9"	"134"	"315202.590148926"	"HCD"	"MS2"	"0"	"17.6"	"100.000"	"35.8612"	"9585"	"9585"	"9564"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.1"	""	"25.4"	""	"27.9"	""	"26.8"	""	"27.7"	"27.1"	""	"1016"	"55"	"37.000"	"30.000"	"0.000160643705136554"	"17"	"0"	"3.278E-05"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPGTPAGEGSGSPPK"	"[R].sPGTPAGEGSGSPPk.[W]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"892.48328"	"1783.95928"	"1783.95905"	"0.13"	"0.00011"	"9/134"	"9"	"134"	"204636.725646973"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"35.8688"	"9593"	"9593"	"9562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.1"	""	"16.9"	""	"18.0"	""	"17.8"	""	"21.7"	"21.1"	""	"1009"	"60"	"37.000"	"30.000"	"4.50672616543447E-05"	"20"	"0"	"0.0002245"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FESDPATHNEPGVR"	"[K].fESDPATHNEPGVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"595.63000"	"1784.87546"	"1784.87649"	"-0.58"	"-0.00034"	"15/130"	"15"	"130"	"1849925.18347168"	"HCD"	"MS2"	"3.546866"	"72.7"	"100.000"	"38.4039"	"10619"	"10619"	"10599"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"89.0"	""	"85.7"	""	"87.4"	""	"135.5"	"4.0"	"139.6"	"149.2"	""	"726"	"25"	"35.000"	"28.000"	"0.103253938200359"	"14"	"0"	"0.0003819"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FESDPATHNEPGVR"	"[K].fESDPATHNEPGVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"595.63019"	"1784.87601"	"1784.87649"	"-0.27"	"-0.00016"	"15/130"	"15"	"130"	"2788464.29962158"	"HCD"	"MS2"	"6.700923"	"61.8"	"100.000"	"38.5774"	"10681"	"10681"	"10661"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"83.0"	""	"75.7"	""	"81.6"	""	"99.7"	"10.0"	"114.2"	"122.1"	""	"730"	"47"	"35.000"	"28.000"	"0.000662663216912195"	"15"	"0"	"3.452E-06"	"1.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGDLGDINAEQLPGR"	"[K].tGDLGDINAEQLPGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"892.97198"	"1784.93669"	"1784.93401"	"1.50"	"0.00134"	"4/144"	"4"	"144"	"97108.407409668"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"75.7463"	"25761"	"25761"	"25730"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.4"	""	"5.1"	""	"7.2"	""	"7.0"	""	"7.9"	"9.6"	""	"939"	"17"	"36.000"	"29.000"	"0.854349553117388"	"14"	"0.005001"	"0.05609"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWPNVEADGSEPTR"	"[K].vWPNVEADGSEPTR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"O88763"	"Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Rattus norvegicus OX=10116 GN=Pik3c3 PE=1 SV=1"	"O88763"	"Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Rattus norvegicus OX=10116 GN=Pik3c3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"893.45166"	"1785.89604"	"1785.89689"	"-0.48"	"-0.00042"	"5/138"	"5"	"138"	"114469.220092773"	"HCD"	"MS2"	"38.26452"	"5.8"	"100.000"	"72.2821"	"24359"	"24359"	"24330"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.9"	""	"12.0"	""	"9.3"	""	"7.5"	""	"10.5"	"11.1"	""	"832"	"16"	"36.000"	"29.000"	"1.01881030860741"	"14"	"0.007627"	"0.09095"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWPNVEADGSEPTR"	"[K].vWPNVEADGSEPTR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"O88763"	"Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Rattus norvegicus OX=10116 GN=Pik3c3 PE=1 SV=1"	"O88763"	"Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Rattus norvegicus OX=10116 GN=Pik3c3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"893.45227"	"1785.89726"	"1785.89689"	"0.21"	"0.00019"	"6/138"	"6"	"138"	"150920.767883301"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"72.2780"	"24371"	"24371"	"24341"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.6"	""	"8.8"	""	"11.2"	""	"10.0"	""	"8.6"	"14.5"	""	"828"	"9"	"36.000"	"29.000"	"4.85288881336926"	"13"	"0.003449"	"0.03503"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESQSHPGDFVLSVR"	"[R].eSQSHPGDFVLSVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.31439"	"1786.92862"	"1786.92853"	"0.05"	"0.00003"	"14/148"	"14"	"148"	"1126770.80279541"	"HCD"	"MS2"	"11.46105"	"28.1"	"100.000"	"57.7684"	"18503"	"18503"	"18479"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.2"	""	"34.3"	""	"34.1"	""	"48.4"	"0.3"	"47.0"	"48.0"	""	"1052"	"47"	"37.000"	"30.000"	"0.00103988603069884"	"15"	"0"	"2.918E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESQSHPGDFVLSVR"	"[R].eSQSHPGDFVLSVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.31439"	"1786.92862"	"1786.92853"	"0.05"	"0.00003"	"14/148"	"14"	"148"	"1127487.78082275"	"HCD"	"MS2"	"7.035104"	"30.1"	"100.000"	"58.0030"	"18584"	"18584"	"18559"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"49.9"	""	"46.1"	""	"45.5"	""	"36.6"	""	"58.7"	"49.7"	""	"1052"	"40"	"37.000"	"30.000"	"0.00554607507501802"	"15"	"0"	"1.773E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSNPALNDNLEK"	"[K].nSNPALNDNLEk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"3"	"3"	"0.8393"	"0.0000"	"1"	"1"	"1"	"596.32703"	"1786.96653"	"1786.96995"	"-1.91"	"-0.00114"	"15/128"	"15"	"128"	"1475090.43280029"	"HCD"	"MS2"	"0"	"52.0"	"100.000"	"54.9525"	"17342"	"17342"	"17323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.7"	""	"58.3"	""	"64.9"	""	"86.7"	""	"100.1"	"98.6"	""	"1182"	"56"	"37.000"	"30.000"	"0.000134768216455225"	"25"	"0"	"6.874E-06"	"0.938"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSNPALNDNLEK"	"[K].nSNPALNDNLEk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"596.32739"	"1786.96762"	"1786.96995"	"-1.30"	"-0.00077"	"16/128"	"16"	"128"	"1761963.70123291"	"HCD"	"MS2"	"3.309142"	"53.4"	"100.000"	"54.4235"	"17140"	"17140"	"17113"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"94.3"	""	"55.3"	""	"80.1"	""	"88.9"	""	"101.5"	"88.9"	""	"1178"	"43"	"37.000"	"30.000"	"0.00326674544932209"	"21"	"0"	"4.603E-05"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSNPALNDNLEK"	"[K].nSNPALNDNLEk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"3"	"3"	"0.8167"	"0.0000"	"1"	"1"	"1"	"596.32739"	"1786.96762"	"1786.96995"	"-1.30"	"-0.00077"	"15/128"	"15"	"128"	"1904486.22167969"	"HCD"	"MS2"	"0"	"57.7"	"100.000"	"54.6572"	"17222"	"17222"	"17200"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"101.0"	""	"66.5"	""	"79.1"	""	"85.9"	"2.0"	"112.4"	"99.8"	""	"1178"	"60"	"37.000"	"30.000"	"6.32579763868993E-05"	"27"	"0"	"1.756E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSNPALNDNLEK"	"[K].nSNPALNDNLEk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"893.98785"	"1786.96843"	"1786.96995"	"-0.85"	"-0.00076"	"5/128"	"5"	"128"	"120505.041870117"	"HCD"	"MS2"	"0"	"11.3"	"100.000"	"54.9914"	"17358"	"17358"	"17337"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.2"	""	"13.0"	""	"15.4"	""	"16.3"	""	"23.5"	"20.6"	""	"1177"	"7"	"37.000"	"30.000"	"11.3958432578258"	"14"	"0.008052"	"0.09901"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSNPALNDNLEK"	"[K].nSNPALNDNLEk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"596.32770"	"1786.96854"	"1786.96995"	"-0.79"	"-0.00047"	"15/128"	"15"	"128"	"975562.421264648"	"HCD"	"MS2"	"0"	"37.4"	"100.000"	"54.7502"	"17272"	"17272"	"17255"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.4"	""	"38.2"	""	"47.4"	""	"56.0"	"1.3"	"72.2"	"75.8"	""	"1177"	"58"	"37.000"	"30.000"	"9.63266522860265E-05"	"27"	"0"	"1.712E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSNPALNDNLEK"	"[K].nSNPALNDNLEk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"893.98804"	"1786.96880"	"1786.96995"	"-0.64"	"-0.00057"	"7/128"	"7"	"128"	"115697.12878418"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"54.7752"	"17283"	"17283"	"17255"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.9"	""	"7.3"	""	"8.7"	""	"9.2"	""	"13.9"	"14.9"	""	"1175"	"14"	"37.000"	"30.000"	"2.17274055620906"	"19"	"0.004022"	"0.04265"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSNPALNDNLEK"	"[K].nSNPALNDNLEk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"893.98828"	"1786.96929"	"1786.96995"	"-0.37"	"-0.00033"	"16/128"	"16"	"128"	"269591.781005859"	"HCD"	"MS2"	"0"	"22.3"	"100.000"	"54.4326"	"17144"	"17144"	"17113"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"46.6"	""	"29.2"	""	"28.9"	""	"39.1"	"0.9"	"33.8"	"32.0"	""	"1171"	"47"	"37.000"	"30.000"	"0.00131077122663176"	"21"	"0"	"0.0001576"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSNPALNDNLEK"	"[K].nSNPALNDNLEk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"893.98926"	"1786.97124"	"1786.96995"	"0.72"	"0.00065"	"14/128"	"14"	"128"	"225489.030212402"	"HCD"	"MS2"	"0"	"18.6"	"100.000"	"54.6664"	"17226"	"17226"	"17200"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.5"	""	"21.1"	""	"19.5"	""	"25.0"	""	"37.4"	"35.7"	""	"1197"	"49"	"37.000"	"30.000"	"0.000829973363579825"	"25"	"0"	"0.0001238"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNHSNIMDDPFIR"	"[K].tNHSNIMDDPFIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"596.96796"	"1788.88932"	"1788.89003"	"-0.40"	"-0.00024"	"6/134"	"6"	"134"	"646103.268798828"	"HCD"	"MS2"	"15.12259"	"19.3"	"100.000"	"66.1852"	"21873"	"21873"	"21848"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.4"	""	"17.5"	""	"23.5"	""	"39.9"	""	"42.5"	"39.1"	""	"817"	"37"	"36.000"	"29.000"	"0.00834049950397503"	"16"	"0"	"0.0003088"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNHSNIMDDPFIR"	"[K].tNHSNIMDDPFIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"596.96838"	"1788.89060"	"1788.89003"	"0.32"	"0.00019"	"6/134"	"6"	"134"	"856411.672424316"	"HCD"	"MS2"	"19.32767"	"22.0"	"100.000"	"66.0545"	"21835"	"21835"	"21812"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.2"	""	"25.7"	""	"28.7"	""	"36.4"	""	"50.4"	"41.9"	""	"804"	"35"	"36.000"	"29.000"	"0.0130384526174438"	"16"	"0"	"0.0008164"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QADTFPDRDHFGR"	"[R].qADTFPDRDHFGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"1"	"4"	"4"	"0.9474"	"0.0000"	"1"	"1"	"1"	"448.47452"	"1790.87624"	"1790.87716"	"-0.51"	"-0.00023"	"9/132"	"9"	"132"	"2765752.38659668"	"HCD"	"MS2"	"10.48327"	"62.3"	"100.000"	"38.0875"	"10482"	"10482"	"10462"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"87.0"	""	"80.1"	""	"85.5"	""	"106.4"	"0.8"	"121.5"	"109.0"	""	"763"	"19"	"35.000"	"28.000"	"0.440042417858747"	"15"	"0"	"0.0003208"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYELPDGQVITIGNER"	"[K].SYELPDGQVITIGNER.[F]"	""	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"895.94849"	"1790.88970"	"1790.89192"	"-1.24"	"-0.00111"	"6/164"	"6"	"164"	"72320.7510375977"	"HCD"	"MS2"	"0"	"0.2"	"100.000"	"91.9447"	"32164"	"32164"	"32150"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	""	""	"2.2"	""	""	""	"NoQuanLabels"	"841"	"26"	"36.000"	"29.000"	"0.104897708267951"	"14"	"0.0006732"	"0.008491"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYELPDGQVITIGNER"	"[K].SYELPDGQVITIGNER.[F]"	""	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"895.94971"	"1790.89214"	"1790.89192"	"0.12"	"0.00011"	"6/164"	"6"	"164"	"102252.251098633"	"HCD"	"MS2"	"0"	""	"100.000"	"91.7129"	"32081"	"32081"	"32071"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	""	""	""	""	""	""	""	""	"NoQuanLabels"	"855"	"28"	"36.000"	"29.000"	"0.0609447246264936"	"14"	"0.0001301"	"0.004638"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYELPDGQVITIGNER"	"[K].SYELPDGQVITIGNER.[F]"	""	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"895.95001"	"1790.89275"	"1790.89192"	"0.46"	"0.00041"	"5/164"	"5"	"164"	"63467.5198974609"	"HCD"	"MS2"	"0"	""	"100.000"	"91.6500"	"32053"	"32053"	"32040"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	""	""	""	""	""	""	"NoQuanLabels"	"863"	"24"	"36.000"	"29.000"	"0.162547689261557"	"14"	"0.0001301"	"0.004716"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDNQVYVATASPAR"	"[R].aVDNQVYVATASPAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"2"	"2"	"0.9194"	"0.0000"	"1"	"1"	"1"	"895.98248"	"1790.95769"	"1790.95983"	"-1.19"	"-0.00107"	"9/152"	"9"	"152"	"289072.539001465"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"55.0162"	"17381"	"17381"	"17352"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.1"	""	"19.1"	""	"17.8"	""	"21.7"	"1.1"	"28.7"	"29.4"	""	"1108"	"62"	"37.000"	"30.000"	"3.19528620719307E-05"	"22"	"0"	"3.389E-07"	"1.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDNQVYVATASPAR"	"[R].aVDNQVYVATASPAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"895.98297"	"1790.95867"	"1790.95983"	"-0.65"	"-0.00058"	"16/152"	"16"	"152"	"295330.4453125"	"HCD"	"MS2"	"100"	"17.9"	"100.000"	"55.2370"	"17457"	"17457"	"17431"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.6"	""	"20.5"	""	"25.7"	""	"31.3"	""	"38.6"	"29.7"	""	"1102"	"34"	"37.000"	"30.000"	"0.0233965379734418"	"15"	"0"	"1.608E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDNQVYVATASPAR"	"[R].aVDNQVYVATASPAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"597.65808"	"1790.95969"	"1790.95983"	"-0.08"	"-0.00005"	"13/152"	"13"	"152"	"1051473.30377197"	"HCD"	"MS2"	"35.09565"	"41.5"	"100.000"	"55.5339"	"17578"	"17578"	"17554"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.0"	""	"48.8"	""	"51.9"	""	"71.7"	""	"88.5"	"79.9"	""	"1113"	"24"	"37.000"	"30.000"	"0.198365055751705"	"14"	"0"	"0.0001207"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGPNELPTEEGK"	"[R].yGPNELPTEEGk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P18596"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2"	"P18596"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"597.98895"	"1791.95230"	"1791.95290"	"-0.33"	"-0.00020"	"11/114"	"11"	"114"	"452896.812988281"	"HCD"	"MS2"	"30.17659"	"23.9"	"100.000"	"64.5059"	"21209"	"21209"	"21183"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.8"	""	"20.1"	""	"21.3"	""	"45.3"	"0.2"	"52.9"	"55.3"	""	"1160"	"16"	"37.000"	"30.000"	"1.40419684710698"	"14"	"0.00736"	"0.08765"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGPNELPTEEGK"	"[R].yGPNELPTEEGk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P18596"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2"	"P18596"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2"	"0"	"3"	"3"	"0.4400"	"0.0000"	"1"	"1"	"1"	"597.98914"	"1791.95285"	"1791.95290"	"-0.03"	"-0.00002"	"9/114"	"9"	"114"	"496218.026000977"	"HCD"	"MS2"	"42.83554"	"22.5"	"100.000"	"64.7398"	"21286"	"21286"	"21255"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.7"	""	"21.7"	""	"21.7"	""	"30.6"	""	"54.1"	"56.7"	""	"1154"	"25"	"37.000"	"30.000"	"0.165644039582825"	"28"	"0.003449"	"0.03436"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTRDDEYDYLFK"	"[M].gTRDDEYDYLFk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"1"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"598.29047"	"1792.85685"	"1792.85911"	"-1.26"	"-0.00076"	"7/118"	"7"	"118"	"446871.482849121"	"HCD"	"MS2"	"12.54779"	"15.4"	"100.000"	"94.7504"	"33205"	"33205"	"33196"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.3"	""	"16.4"	""	"21.4"	""	"30.6"	""	"23.7"	"27.2"	""	"624"	"28"	"34.000"	"27.000"	"0.0464680656245805"	"17"	"0.000936"	"0.01236"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTRDDEYDYLFK"	"[M].gTRDDEYDYLFk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"896.93225"	"1792.85723"	"1792.85911"	"-1.05"	"-0.00094"	"12/118"	"12"	"118"	"424578.429626465"	"HCD"	"MS2"	"0"	"32.4"	"100.000"	"94.7743"	"33233"	"33233"	"33220"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.1"	""	"34.2"	""	"37.4"	""	"61.3"	"0.7"	"57.5"	"61.9"	""	"622"	"32"	"34.000"	"27.000"	"0.0193981533835032"	"15"	"0"	"0.001376"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTRDDEYDYLFK"	"[M].gTRDDEYDYLFk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"1"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"598.29071"	"1792.85758"	"1792.85911"	"-0.85"	"-0.00051"	"9/118"	"9"	"118"	"494419.317077637"	"HCD"	"MS2"	"14.30957"	"15.4"	"100.000"	"94.7237"	"33213"	"33213"	"33205"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.7"	""	"18.5"	""	"24.1"	""	"24.8"	""	"25.8"	"28.5"	""	"623"	"20"	"34.000"	"27.000"	"0.303010760206525"	"17"	"0.003507"	"0.03671"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTRDDEYDYLFK"	"[M].gTRDDEYDYLFk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"1"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"896.93256"	"1792.85784"	"1792.85911"	"-0.71"	"-0.00064"	"10/118"	"10"	"118"	"709133.084228516"	"HCD"	"MS2"	"48.89299"	"32.3"	"100.000"	"94.7666"	"33211"	"33211"	"33202"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.4"	""	"32.5"	""	"40.2"	""	"55.0"	""	"68.9"	"59.5"	""	"626"	"30"	"34.000"	"27.000"	"0.0315896153342002"	"20"	"0.008668"	"0.109"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTRDDEYDYLFK"	"[M].gTRDDEYDYLFk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"1"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"598.29102"	"1792.85849"	"1792.85911"	"-0.34"	"-0.00021"	"10/118"	"10"	"118"	"1108880.09057617"	"HCD"	"MS2"	"0"	"30.6"	"100.000"	"95.0193"	"33307"	"33307"	"33298"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.7"	""	"33.6"	""	"31.8"	""	"59.7"	"0.5"	"58.0"	"50.1"	""	"626"	"19"	"34.000"	"27.000"	"0.377176249336372"	"16"	"0.001728"	"0.02018"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTRDDEYDYLFK"	"[M].gTRDDEYDYLFk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"1"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"896.93311"	"1792.85893"	"1792.85911"	"-0.10"	"-0.00009"	"14/118"	"14"	"118"	"641015.247680664"	"HCD"	"MS2"	"0"	"46.4"	"100.000"	"95.0448"	"33317"	"33317"	"33305"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"83.4"	""	"42.5"	""	"52.7"	""	"85.3"	"0.8"	"91.1"	"84.0"	""	"629"	"34"	"34.000"	"27.000"	"0.0113401983230307"	"19"	"0"	"0.0001741"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTRDDEYDYLFK"	"[M].gTRDDEYDYLFk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"1"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"896.93317"	"1792.85906"	"1792.85911"	"-0.03"	"-0.00003"	"9/118"	"9"	"118"	"581748.089660645"	"HCD"	"MS2"	"0"	"45.0"	"100.000"	"95.0399"	"33334"	"33334"	"33327"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"82.6"	""	"50.8"	""	"52.0"	""	"66.6"	""	"84.0"	"90.8"	""	"639"	"39"	"35.000"	"28.000"	"0.00369377861380376"	"20"	"0"	"0.0003759"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTRDDEYDYLFK"	"[M].gTRDDEYDYLFk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"1"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"598.29132"	"1792.85941"	"1792.85911"	"0.17"	"0.00010"	"7/118"	"7"	"118"	"1169790.22271729"	"HCD"	"MS2"	"0"	"33.6"	"100.000"	"94.9887"	"33315"	"33315"	"33305"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.5"	""	"34.0"	""	"36.8"	""	"48.3"	""	"73.6"	"70.9"	""	"638"	"28"	"35.000"	"28.000"	"0.0563366064798887"	"17"	"0.0003538"	"0.006723"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ADQLTEEQIAEFK"	"[M].aDQLTEEQIAEFk.[E]"	"N-Term(Prot)(Acetyl); K13(TMT6plex)"	"1"	"1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"896.96130"	"1792.91533"	"1792.91663"	"-0.72"	"-0.00065"	"10/134"	"10"	"134"	"218571.711791992"	"HCD"	"MS2"	"12.70504"	"10.5"	"100.000"	"107.9065"	"37626"	"37626"	"37613"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.9"	""	"11.5"	""	"13.1"	""	"22.2"	""	"21.8"	"19.8"	""	"1020"	"36"	"37.000"	"30.000"	"0.0139820282768322"	"20"	"0"	"0.0003431"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"ANQLTEEQIAEFK"	"[].anQLTEEQIAEFk.[]"	"N-Term(Prot)(Acetyl); N2(Deamidated); K13(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"896.96130"	"1792.91533"	"1792.91663"	"-0.72"	"-0.00065"	"10/130"	"10"	"130"	"218571.711791992"	"HCD"	"MS2"	"12.70504"	"10.5"	"100.000"	"107.9065"	"37626"	"37626"	"37613"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.9"	""	"11.5"	""	"13.1"	""	"22.2"	""	"21.8"	"19.8"	""	"1020"	"36"	"37.000"	"30.000"	"0.0139820282768322"	"20"	"0"	"0.0003431"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ADQLTEEQIAEFK"	"[M].aDQLTEEQIAEFk.[E]"	"N-Term(Prot)(Acetyl); K13(TMT6plex)"	"1"	"1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"896.96191"	"1792.91655"	"1792.91663"	"-0.04"	"-0.00004"	"8/134"	"8"	"134"	"163684.277282715"	"HCD"	"MS2"	"12.70296"	"6.8"	"100.000"	"107.9518"	"37562"	"37562"	"37546"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.0"	""	"7.4"	""	"7.9"	""	"17.3"	""	"13.4"	"10.0"	""	"1012"	"28"	"37.000"	"30.000"	"0.0824423792515699"	"21"	"0"	"0.0004269"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"ANQLTEEQIAEFK"	"[].anQLTEEQIAEFk.[]"	"N-Term(Prot)(Acetyl); N2(Deamidated); K13(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"896.96191"	"1792.91655"	"1792.91663"	"-0.04"	"-0.00004"	"8/130"	"8"	"130"	"163684.277282715"	"HCD"	"MS2"	"12.70296"	"6.8"	"100.000"	"107.9518"	"37562"	"37562"	"37546"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.0"	""	"7.4"	""	"7.9"	""	"17.3"	""	"13.4"	"10.0"	""	"1012"	"28"	"37.000"	"30.000"	"0.0824423792515699"	"21"	"0"	"0.0004269"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPLPLQDGPGPEGGR"	"[R].sSPLPLQDGPGPEGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"598.31738"	"1792.93760"	"1792.93909"	"-0.83"	"-0.00050"	"10/162"	"10"	"162"	"1346069.92926025"	"HCD"	"MS2"	"4.919442"	"21.7"	"100.000"	"61.6921"	"20070"	"20070"	"20049"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.1"	""	"21.7"	""	"24.3"	""	"44.4"	""	"46.1"	"40.3"	""	"1158"	"48"	"37.000"	"30.000"	"0.000913436925155921"	"16"	"0"	"7.421E-06"	"0.931"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPLPLQDGPGPEGGR"	"[R].sSPLPLQDGPGPEGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"896.97247"	"1792.93767"	"1792.93909"	"-0.79"	"-0.00071"	"7/162"	"7"	"162"	"202171.98248291"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"61.5973"	"20016"	"20016"	"19985"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.7"	""	"8.5"	""	"12.0"	""	"15.9"	""	"15.6"	"16.0"	""	"1158"	"34"	"37.000"	"30.000"	"0.0257441503864614"	"24"	"0"	"0.001691"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPLPLQDGPGPEGGR"	"[R].sSPLPLQDGPGPEGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"896.97266"	"1792.93804"	"1792.93909"	"-0.59"	"-0.00053"	"17/162"	"17"	"162"	"385792.341308594"	"HCD"	"MS2"	"0"	"16.4"	"100.000"	"61.5842"	"20026"	"20026"	"20001"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"27.8"	""	"22.1"	""	"28.5"	""	"27.8"	""	"24.2"	"25.7"	""	"1163"	"38"	"37.000"	"30.000"	"0.00954002953115533"	"15"	"0"	"0.0002382"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPLPLQDGPGPEGGR"	"[R].sSPLPLQDGPGPEGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"598.31775"	"1792.93869"	"1792.93909"	"-0.22"	"-0.00013"	"10/162"	"10"	"162"	"1628938.87200928"	"HCD"	"MS2"	"8.101704"	"22.4"	"100.000"	"61.7700"	"20086"	"20086"	"20065"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.4"	""	"27.4"	""	"27.4"	""	"39.7"	""	"37.1"	"54.3"	""	"1159"	"45"	"37.000"	"30.000"	"0.00169845263562256"	"15"	"0"	"1.389E-06"	"1.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMSGSEASDVPVK"	"[R].eMSGSEASDVPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"897.46899"	"1793.93071"	"1793.93554"	"-2.69"	"-0.00241"	"6/112"	"6"	"112"	"179893.275939941"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"55.8267"	"17712"	"17712"	"17681"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.5"	""	"19.6"	""	"10.2"	""	"15.8"	""	"19.1"	"16.7"	""	"1182"	"23"	"37.000"	"30.000"	"0.279632394046235"	"14"	"0.001635"	"0.01976"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMSGSEASDVPVK"	"[R].eMSGSEASDVPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"598.64923"	"1793.93314"	"1793.93554"	"-1.34"	"-0.00080"	"10/112"	"10"	"112"	"1574853.16589355"	"HCD"	"MS2"	"40.47257"	"48.7"	"100.000"	"55.8061"	"17703"	"17703"	"17681"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"100.1"	""	"65.8"	""	"54.6"	""	"75.8"	"0.5"	"78.5"	"85.0"	""	"1180"	"38"	"37.000"	"30.000"	"0.0104196231420484"	"21"	"0"	"5.726E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEVINQPMMMAAR"	"[K].aGEVINQPmmmAAR.[Q]"	"N-Term(TMT6plex); M9(Oxidation); M10(Oxidation); M11(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.29437"	"1795.86856"	"1795.87023"	"-0.93"	"-0.00055"	"16/120"	"16"	"120"	"1210467.48730469"	"HCD"	"MS2"	"11.17496"	"36.5"	"100.000"	"38.4935"	"10656"	"10656"	"10629"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.5"	""	"33.4"	""	"45.0"	""	"79.1"	"1.1"	"75.5"	"68.9"	""	"613"	"24"	"34.000"	"27.000"	"0.115459714388568"	"14"	"0"	"0.0001204"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEVINQPMMMAAR"	"[K].aGEVINQPmmmAAR.[Q]"	"N-Term(TMT6plex); M9(Oxidation); M10(Oxidation); M11(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.29492"	"1795.87021"	"1795.87023"	"-0.01"	"0.00000"	"15/120"	"15"	"120"	"1194598.13916016"	"HCD"	"MS2"	"36.60274"	"38.5"	"100.000"	"38.6462"	"10709"	"10709"	"10687"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.8"	""	"35.0"	""	"42.6"	""	"84.9"	"0.5"	"83.8"	"77.9"	""	"622"	"23"	"34.000"	"27.000"	"0.139238837598849"	"14"	"0"	"0.0006214"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEVINQPMMMAAR"	"[K].aGEVINQPmmmAAR.[Q]"	"N-Term(TMT6plex); M9(Oxidation); M10(Oxidation); M11(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"898.43884"	"1795.87041"	"1795.87023"	"0.10"	"0.00009"	"6/120"	"6"	"120"	"118752.483154297"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"38.3854"	"10612"	"10612"	"10584"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	""	""	"13.2"	""	"5.4"	"7.1"	""	"614"	"21"	"34.000"	"27.000"	"0.255940123678228"	"18"	"0.0001301"	"0.004789"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEVINQPMMMAAR"	"[K].aGEVINQPmmmAAR.[Q]"	"N-Term(TMT6plex); M9(Oxidation); M10(Oxidation); M11(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"898.43909"	"1795.87090"	"1795.87023"	"0.37"	"0.00033"	"5/120"	"5"	"120"	"89976.1871337891"	"HCD"	"MS2"	"100"	"2.0"	"100.000"	"38.5633"	"10676"	"10676"	"10647"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.7"	""	"2.7"	""	""	""	"8.8"	""	"5.6"	""	""	"636"	"8"	"35.000"	"28.000"	"5.37560216262558"	"13"	"0.0002479"	"0.005145"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGDTGMLPANYVEAI"	"[R].tGDTGmLPANYVEAI.[-]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"898.95117"	"1796.89507"	"1796.89378"	"0.72"	"0.00064"	"5/136"	"5"	"136"	"110717.345947266"	"HCD"	"MS2"	"0"	"1.2"	"100.000"	"105.4802"	"36714"	"36714"	"36704"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.1"	""	"1.7"	""	"1.8"	""	"2.8"	""	""	"2.9"	""	"859"	"15"	"36.000"	"29.000"	"1.38026720134602"	"13"	"0.0023"	"0.02375"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGDTGMLPANYVEAI"	"[R].tGDTGmLPANYVEAI.[-]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"898.95160"	"1796.89592"	"1796.89378"	"1.19"	"0.00107"	"5/136"	"5"	"136"	"71510.3928833008"	"HCD"	"MS2"	"0"	"0.3"	"100.000"	"105.5094"	"36656"	"36656"	"36643"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	""	""	""	""	"3.2"	""	""	"864"	"22"	"36.000"	"29.000"	"0.276365448928504"	"14"	"0.000936"	"0.01334"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGVGGEDDDGEVHR"	"[K].iLGVGGEDDDGEVHR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"B3DMA0"	"Tumor protein p53-inducible protein 11 OS=Rattus norvegicus OX=10116 GN=Tp53i11 PE=1 SV=1"	"B3DMA0"	"Tumor protein p53-inducible protein 11 OS=Rattus norvegicus OX=10116 GN=Tp53i11 PE=1 SV=1"	"0"	"3"	"3"	"0.8395"	"0.0000"	"1"	"1"	"1"	"599.63690"	"1796.89615"	"1796.89762"	"-0.82"	"-0.00049"	"16/122"	"16"	"122"	"592519.789367676"	"HCD"	"MS2"	"0"	"14.9"	"100.000"	"55.5731"	"17594"	"17594"	"17570"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.0"	""	"15.6"	""	"18.0"	""	"25.9"	""	"27.2"	"32.1"	""	"860"	"81"	"36.000"	"29.000"	"3.47911236646704E-07"	""	"0"	"4.489E-07"	"1.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDNDENEHQLSLR"	"[K].vDNDENEHQLSLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.96832"	"1797.89042"	"1797.89287"	"-1.37"	"-0.00082"	"11/134"	"11"	"134"	"802547.355712891"	"HCD"	"MS2"	"36.73719"	"36.2"	"100.000"	"41.3580"	"11812"	"11812"	"11789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.9"	""	"33.3"	""	"40.6"	""	"70.7"	""	"69.9"	"71.9"	""	"800"	"31"	"36.000"	"29.000"	"0.0297892789562396"	"15"	"0"	"2.644E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLNQGIGEPQSPSR"	"[R].aDLNQGIGEPQSPSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZY0"	"EF-hand domain-containing protein D2 OS=Rattus norvegicus OX=10116 GN=Efhd2 PE=1 SV=1"	"Q4FZY0"	"EF-hand domain-containing protein D2 OS=Rattus norvegicus OX=10116 GN=Efhd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"899.46771"	"1797.92815"	"1797.92926"	"-0.62"	"-0.00055"	"3/158"	"3"	"158"	"86286.4138183594"	"HCD"	"MS2"	"100"	"5.1"	"100.000"	"50.9811"	"15726"	"15726"	"15698"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.4"	""	"6.4"	""	"5.6"	""	"6.9"	""	"10.6"	"10.2"	""	"1013"	"2"	"37.000"	"30.000"	"28.6800199897875"	"13"	"0.004938"	"0.05268"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNASTDYDLSDK"	"[K].nNASTDYDLSDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"900.95282"	"1800.89836"	"1800.90159"	"-1.79"	"-0.00162"	"7/124"	"7"	"124"	"122901.071228027"	"HCD"	"MS2"	"100"	"13.8"	"100.000"	"52.4626"	"16342"	"16342"	"16312"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.9"	""	"10.8"	""	"14.6"	""	"25.6"	"1.5"	"32.9"	"24.5"	""	"776"	"15"	"35.000"	"28.000"	"1.15300642031435"	"17"	"0.001211"	"0.01434"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNASTDYDLSDK"	"[K].nNASTDYDLSDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"900.95343"	"1800.89958"	"1800.90159"	"-1.12"	"-0.00100"	"5/124"	"5"	"124"	"243581.390991211"	"HCD"	"MS2"	"100"	"24.7"	"100.000"	"52.8363"	"16483"	"16483"	"16455"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.7"	""	"17.1"	""	"31.5"	""	"43.7"	""	"56.6"	"46.2"	""	"787"	"24"	"35.000"	"28.000"	"0.167087798412874"	"24"	"0"	"0.003332"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNASTDYDLSDK"	"[K].nNASTDYDLSDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"600.97162"	"1800.90030"	"1800.90159"	"-0.72"	"-0.00043"	"12/124"	"12"	"124"	"1729945.67266846"	"HCD"	"MS2"	"69.2468"	"64.0"	"100.000"	"52.5662"	"16384"	"16384"	"16360"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"85.3"	""	"61.3"	""	"72.8"	""	"113.6"	""	"138.4"	"137.0"	""	"802"	"37"	"36.000"	"29.000"	"0.00728021780772028"	"24"	"0"	"9.297E-05"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNASTDYDLSDK"	"[K].nNASTDYDLSDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"900.95386"	"1800.90044"	"1800.90159"	"-0.64"	"-0.00058"	"5/124"	"5"	"124"	"126728.436523438"	"HCD"	"MS2"	"0"	"12.1"	"100.000"	"52.7870"	"16474"	"16474"	"16449"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.7"	""	"8.5"	""	"14.5"	""	"24.0"	""	"22.0"	"22.0"	""	"800"	"24"	"36.000"	"29.000"	"0.177035348945051"	"15"	"0.000936"	"0.0123"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQYDDVPEYK"	"[K].sVQYDDVPEYk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"900.97345"	"1800.93962"	"1800.94200"	"-1.32"	"-0.00119"	"10/112"	"10"	"112"	"236238.855102539"	"HCD"	"MS2"	"0"	"17.8"	"100.000"	"69.7061"	"23323"	"23323"	"23294"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.3"	""	"19.5"	""	"18.1"	""	"27.3"	"0.7"	"45.0"	"37.4"	""	"929"	"30"	"36.000"	"29.000"	"0.0452882686719726"	"18"	"0.001465"	"0.01841"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQYDDVPEYK"	"[K].sVQYDDVPEYk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"900.97406"	"1800.94084"	"1800.94200"	"-0.64"	"-0.00058"	"10/112"	"10"	"112"	"190941.225036621"	"HCD"	"MS2"	"0"	"13.5"	"100.000"	"69.8161"	"23354"	"23354"	"23323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.6"	""	"15.2"	""	"11.3"	""	"22.7"	"1.0"	"36.2"	"27.5"	""	"933"	"31"	"36.000"	"29.000"	"0.0406304514714511"	"22"	"0.001635"	"0.01989"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEEMLPEEPLK"	"[R].gAEEMLPEEPLk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"900.99268"	"1800.97807"	"1800.98176"	"-2.04"	"-0.00184"	"7/100"	"7"	"100"	"84226.1594848633"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"84.7482"	"29374"	"29374"	"29353"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.7"	""	"6.4"	""	"5.3"	""	"4.9"	""	"4.6"	"6.8"	""	"983"	"22"	"36.000"	"29.000"	"0.326229719102538"	"14"	"0.003059"	"0.03043"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEEMLPEEPLK"	"[R].gAEEMLPEEPLk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"900.99469"	"1800.98210"	"1800.98176"	"0.19"	"0.00017"	"5/100"	"5"	"100"	"69550.4575805664"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"84.7254"	"29363"	"29363"	"29351"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.1"	""	"7.1"	""	"6.0"	""	"4.3"	""	"7.1"	"9.3"	""	"996"	"5"	"36.000"	"29.000"	"15.9672212360372"	"13"	"0.009853"	"0.1279"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEAPNWATQDSGFY"	"[R].sEAPNWATQDSGFY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"901.41486"	"1801.82244"	"1801.82306"	"-0.35"	"-0.00031"	"4/132"	"4"	"132"	"50990.5629882813"	"HCD"	"MS2"	"0"	"0.3"	"100.000"	"102.2929"	"35766"	"35766"	"35760"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	""	""	""	""	""	""	"2.6"	""	""	"341"	"21"	"32.000"	"25.000"	"0.14952864000499"	"15"	"0.0008629"	"0.01019"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEAPNWATQDSGFY"	"[R].sEAPNWATQDSGFY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"901.41486"	"1801.82244"	"1801.82306"	"-0.35"	"-0.00031"	"4/132"	"4"	"132"	"52558.153503418"	"HCD"	"MS2"	"0"	""	"100.000"	"102.0256"	"35684"	"35684"	"35673"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	""	""	""	""	""	""	""	""	""	"341"	"16"	"32.000"	"25.000"	"0.431245308394068"	"13"	"0.002937"	"0.02742"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEAPNWATQDSGFY"	"[R].sEAPNWATQDSGFY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"901.41492"	"1801.82256"	"1801.82306"	"-0.28"	"-0.00025"	"5/132"	"5"	"132"	"66476.4447631836"	"HCD"	"MS2"	"0"	""	"100.000"	"102.3238"	"35715"	"35715"	"35708"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	""	""	""	""	""	""	""	"341"	"14"	"32.000"	"25.000"	"0.642279977267565"	"13"	"0.0023"	"0.02418"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEAPNWATQDSGFY"	"[R].sEAPNWATQDSGFY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"901.41516"	"1801.82305"	"1801.82306"	"-0.01"	"-0.00001"	"4/132"	"4"	"132"	"123431.524780273"	"HCD"	"MS2"	"0"	""	"100.000"	"102.0647"	"35642"	"35642"	"35636"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	""	""	""	""	""	""	""	"347"	"13"	"32.000"	"25.000"	"0.900118067541747"	"13"	"0.00447"	"0.04698"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30493"	"1801.90024"	"1801.90304"	"-1.55"	"-0.00093"	"9/122"	"9"	"122"	"148877.337463379"	"HCD"	"MS2"	"15.37412"	"4.3"	"100.000"	"113.1436"	"38993"	"38993"	"38990"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.5"	""	"2.8"	""	"4.4"	""	"10.8"	""	"10.0"	"10.3"	""	"799"	"18"	"36.000"	"29.000"	"0.71042262431055"	"14"	"0"	"0.0006101"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"601.30505"	"1801.90061"	"1801.90304"	"-1.35"	"-0.00081"	"9/122"	"9"	"122"	"2888656.33087158"	"HCD"	"MS2"	"25.84418"	"49.9"	"100.000"	"45.2960"	"13410"	"13410"	"13387"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"54.3"	""	"44.8"	""	"54.1"	""	"100.4"	"1.4"	"113.7"	"106.1"	""	"793"	"52"	"35.000"	"28.000"	"0.000273680082222656"	"18"	"0"	"2.756E-07"	"1.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30518"	"1801.90097"	"1801.90304"	"-1.15"	"-0.00069"	"8/122"	"8"	"122"	"93222.6176757813"	"HCD"	"MS2"	"0"	"1.0"	"100.000"	"116.7477"	"39543"	"39543"	"39540"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	"1.9"	""	""	""	"2.2"	""	"3.1"	"2.9"	""	"795"	"15"	"35.000"	"29.000"	"1.340717051919"	"13"	"0.0002479"	"0.00599"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30530"	"1801.90134"	"1801.90304"	"-0.94"	"-0.00057"	"8/122"	"8"	"122"	"115865.651184082"	"HCD"	"MS2"	"0"	"1.1"	"100.000"	"113.9989"	"39135"	"39135"	"39133"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	""	""	"2.8"	""	"2.8"	"4.8"	""	"796"	"10"	"35.000"	"29.000"	"3.97084625401376"	"13"	"0.0001301"	"0.003996"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30530"	"1801.90134"	"1801.90304"	"-0.94"	"-0.00057"	"7/122"	"7"	"122"	"125052.840759277"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"112.4438"	"38874"	"38874"	"38872"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.8"	""	""	""	"4.0"	""	"2.6"	""	"7.4"	"4.3"	""	"796"	"26"	"35.000"	"29.000"	"0.108114282899795"	"14"	"0"	"0.001176"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30530"	"1801.90134"	"1801.90304"	"-0.94"	"-0.00057"	"8/122"	"8"	"122"	"151116.991088867"	"HCD"	"MS2"	"3.698155"	"1.4"	"100.000"	"118.9438"	"40023"	"40023"	"40021"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.5"	""	""	""	""	""	"2.1"	""	"5.1"	"4.2"	""	"796"	"5"	"35.000"	"29.000"	"12.6148785029131"	"13"	"0.0006732"	"0.009011"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30536"	"1801.90152"	"1801.90304"	"-0.84"	"-0.00051"	"9/122"	"9"	"122"	"135223.829162598"	"HCD"	"MS2"	"0"	"2.0"	"100.000"	"115.2721"	"39340"	"39340"	"39338"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.8"	""	""	""	"1.9"	""	"5.5"	""	"6.6"	"2.2"	""	"796"	"14"	"35.000"	"29.000"	"1.49928111995596"	"13"	"0.0001301"	"0.004784"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30536"	"1801.90152"	"1801.90304"	"-0.84"	"-0.00051"	"8/122"	"8"	"122"	"169247.450927734"	"HCD"	"MS2"	"0"	"1.5"	"100.000"	"114.5113"	"39221"	"39221"	"39218"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	"3.9"	""	"3.8"	""	"4.8"	"2.1"	""	"796"	"20"	"35.000"	"29.000"	"0.375736228761797"	"14"	"0"	"0.0006732"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"901.45441"	"1801.90154"	"1801.90304"	"-0.83"	"-0.00075"	"22/122"	"22"	"122"	"5521837.96398926"	"HCD"	"MS2"	"0"	"223.3"	"100.000"	"43.6671"	"12762"	"12762"	"12754"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"257.3"	""	"146.6"	""	"202.7"	""	"505.9"	"3.3"	"544.9"	"465.8"	""	"796"	"78"	"35.000"	"29.000"	"6.33699073366365E-07"	"25"	"0"	"3.918E-09"	"1.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"901.45447"	"1801.90166"	"1801.90304"	"-0.77"	"-0.00069"	"11/122"	"11"	"122"	"490544.574890137"	"HCD"	"MS2"	"0"	"23.3"	"100.000"	"44.0966"	"12926"	"12926"	"12907"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.6"	""	"16.3"	""	"20.1"	""	"56.5"	""	"56.5"	"46.5"	""	"796"	"41"	"35.000"	"29.000"	"0.00328006969775174"	"23"	"0"	"3.711E-05"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30542"	"1801.90171"	"1801.90304"	"-0.74"	"-0.00044"	"7/122"	"7"	"122"	"124856.630554199"	"HCD"	"MS2"	"8.596635"	"2.4"	"100.000"	"111.8928"	"38769"	"38769"	"38764"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.5"	""	"2.1"	""	"1.9"	""	"3.9"	""	"4.4"	"6.4"	""	"797"	"12"	"36.000"	"29.000"	"2.45147983774882"	"13"	"0.0001301"	"0.004706"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30542"	"1801.90171"	"1801.90304"	"-0.74"	"-0.00044"	"8/122"	"8"	"122"	"132334.510681152"	"HCD"	"MS2"	"5.941889"	"1.6"	"100.000"	"116.2233"	"39469"	"39469"	"39467"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.4"	""	""	""	"2.1"	""	"4.0"	""	"3.9"	"3.6"	""	"797"	"6"	"36.000"	"29.000"	"9.67004122890343"	"13"	"0.0003538"	"0.006936"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30542"	"1801.90171"	"1801.90304"	"-0.74"	"-0.00044"	"11/122"	"11"	"122"	"147979.963867188"	"HCD"	"MS2"	"15.57705"	"1.9"	"100.000"	"119.2240"	"40063"	"40063"	"40061"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.7"	""	""	""	""	""	"4.6"	""	"5.5"	"4.8"	""	"797"	"16"	"36.000"	"29.000"	"0.902460756575834"	"14"	"0"	"0.003075"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"601.30542"	"1801.90171"	"1801.90304"	"-0.74"	"-0.00044"	"9/122"	"9"	"122"	"202787.757141113"	"HCD"	"MS2"	"7.891319"	"1.9"	"100.000"	"116.4910"	"39509"	"39509"	"39506"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.7"	""	"2.5"	""	"2.8"	""	"3.6"	""	"3.7"	"3.2"	""	"797"	"14"	"36.000"	"29.000"	"1.47716267630356"	"14"	"0.0001301"	"0.004143"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30542"	"1801.90171"	"1801.90304"	"-0.74"	"-0.00044"	"10/122"	"10"	"122"	"178644.416137695"	"HCD"	"MS2"	"4.508918"	"1.9"	"100.000"	"118.5520"	"39816"	"39816"	"39814"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	"2.2"	""	"2.9"	""	"4.7"	""	"2.2"	"6.3"	""	"797"	"18"	"36.000"	"29.000"	"0.65528213170115"	"14"	"0"	"0.0007997"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9492"	"0.0000"	"1"	"1"	"1"	"901.45453"	"1801.90178"	"1801.90304"	"-0.70"	"-0.00063"	"14/122"	"14"	"122"	"2281431.25463867"	"HCD"	"MS2"	"0"	"100.6"	"100.000"	"43.3783"	"12647"	"12647"	"12623"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"116.8"	""	"78.3"	""	"85.7"	""	"240.9"	"1.3"	"233.6"	"200.5"	""	"804"	"59"	"36.000"	"29.000"	"5.49826987889531E-05"	"20"	"0"	"3.163E-09"	"1.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30548"	"1801.90189"	"1801.90304"	"-0.64"	"-0.00038"	"13/122"	"13"	"122"	"129478.593139648"	"HCD"	"MS2"	"0"	"2.4"	"100.000"	"113.6985"	"39088"	"39088"	"39085"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	"2.7"	""	"4.1"	""	"7.6"	""	"4.5"	"4.4"	""	"803"	"27"	"36.000"	"29.000"	"0.084466704356624"	"14"	"0"	"0.0001794"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30548"	"1801.90189"	"1801.90304"	"-0.64"	"-0.00038"	"9/122"	"9"	"122"	"197193.797058105"	"HCD"	"MS2"	"12.03245"	"5.0"	"100.000"	"110.3046"	"38484"	"38484"	"38480"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.7"	""	"5.2"	""	"7.6"	""	"9.9"	""	"8.3"	"9.5"	""	"803"	"5"	"36.000"	"29.000"	"13.2338299439249"	"13"	"0.0002479"	"0.005775"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30548"	"1801.90189"	"1801.90304"	"-0.64"	"-0.00038"	"4/122"	"4"	"122"	"169965.55255127"	"HCD"	"MS2"	"9.565988"	"2.5"	"100.000"	"113.4379"	"39042"	"39042"	"39039"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.1"	""	"3.8"	""	"2.8"	""	"5.3"	""	"3.2"	"5.7"	""	"803"	"13"	"36.000"	"29.000"	"2.05913845672533"	"13"	"0.0002479"	"0.005615"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30548"	"1801.90189"	"1801.90304"	"-0.64"	"-0.00038"	"9/122"	"9"	"122"	"210158.855712891"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"111.2402"	"38748"	"38748"	"38744"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.1"	""	"3.2"	""	"4.3"	""	"7.0"	""	"6.6"	"6.7"	""	"803"	"14"	"36.000"	"29.000"	"1.54769560602807"	"13"	"0.0002479"	"0.005805"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9036"	"0.0000"	"1"	"1"	"1"	"901.45459"	"1801.90190"	"1801.90304"	"-0.63"	"-0.00057"	"13/122"	"13"	"122"	"5313362.94659424"	"HCD"	"MS2"	"0"	"213.8"	"100.000"	"43.7758"	"12797"	"12797"	"12789"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"239.9"	""	"151.4"	""	"189.6"	""	"495.0"	"1.3"	"515.6"	"442.8"	""	"803"	"83"	"36.000"	"29.000"	"2.01690549693239E-07"	"26"	"0"	"2.761E-09"	"1.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30554"	"1801.90207"	"1801.90304"	"-0.54"	"-0.00032"	"11/122"	"11"	"122"	"174138.109069824"	"HCD"	"MS2"	"3.329039"	"1.9"	"100.000"	"116.1599"	"39610"	"39610"	"39608"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.0"	""	""	""	"1.9"	""	"5.6"	""	"5.3"	"2.3"	""	"820"	"18"	"36.000"	"29.000"	"0.649806208909057"	"14"	"0"	"0.001124"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9028"	"0.0000"	"1"	"1"	"1"	"601.30554"	"1801.90207"	"1801.90304"	"-0.54"	"-0.00032"	"13/122"	"13"	"122"	"19213016.9555054"	"HCD"	"MS2"	"13.61702"	"140.9"	"100.000"	"43.4295"	"12657"	"12657"	"12634"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"161.2"	""	"113.5"	""	"130.0"	""	"320.8"	"4.4"	"331.1"	"279.4"	""	"820"	"72"	"36.000"	"29.000"	"2.88259651152372E-06"	"24"	"0"	"3.476E-10"	"1.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30560"	"1801.90226"	"1801.90304"	"-0.44"	"-0.00026"	"10/122"	"10"	"122"	"115922.517456055"	"HCD"	"MS2"	"0"	"2.1"	"100.000"	"114.9123"	"39431"	"39431"	"39429"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.5"	""	""	""	"2.0"	""	"5.3"	""	"5.2"	"4.3"	""	"807"	"18"	"36.000"	"29.000"	"0.630730073805626"	"14"	"0"	"0.001521"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30560"	"1801.90226"	"1801.90304"	"-0.44"	"-0.00026"	"7/122"	"7"	"122"	"137896.620849609"	"HCD"	"MS2"	"7.594925"	"1.7"	"100.000"	"115.1945"	"39481"	"39481"	"39476"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.4"	""	"3.5"	""	"2.2"	""	""	""	"4.8"	"3.5"	""	"807"	"14"	"36.000"	"29.000"	"1.70154539133433"	"13"	"0.0003538"	"0.006221"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9467"	"0.0000"	"1"	"1"	"1"	"601.30560"	"1801.90226"	"1801.90304"	"-0.44"	"-0.00026"	"11/122"	"11"	"122"	"11021454.2545166"	"HCD"	"MS2"	"2.922843"	"82.1"	"92.436"	"44.2722"	"13006"	"13006"	"12989"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.2"	""	"78.2"	""	"75.2"	""	"175.5"	"2.2"	"184.6"	"174.5"	""	"807"	"75"	"36.000"	"29.000"	"1.19630946567307E-06"	"21"	"0"	"9.218E-10"	"1.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"601.30566"	"1801.90244"	"1801.90304"	"-0.33"	"-0.00020"	"10/122"	"10"	"122"	"125802.590087891"	"HCD"	"MS2"	"9.375278"	"2.3"	"100.000"	"113.4902"	"39195"	"39195"	"39193"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.7"	""	"3.3"	""	"2.3"	""	"5.3"	""	"3.2"	"5.7"	""	"809"	"28"	"36.000"	"29.000"	"0.0620752569542314"	"21"	"0"	"0.0005345"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"601.30566"	"1801.90244"	"1801.90304"	"-0.33"	"-0.00020"	"9/122"	"9"	"122"	"194878.896118164"	"HCD"	"MS2"	"13.16613"	"1.8"	"100.000"	"117.2771"	"39627"	"39627"	"39625"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.5"	""	"1.9"	""	"2.0"	""	"3.5"	""	"2.5"	"4.4"	""	"809"	"9"	"36.000"	"29.000"	"4.59111874939451"	"15"	"0.0002479"	"0.005749"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"601.30566"	"1801.90244"	"1801.90304"	"-0.33"	"-0.00020"	"11/122"	"11"	"122"	"3034505.91235352"	"HCD"	"MS2"	"21.88695"	"56.4"	"100.000"	"45.1350"	"13355"	"13355"	"13335"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.2"	""	"55.9"	""	"49.6"	""	"123.6"	"3.0"	"137.9"	"110.5"	""	"809"	"48"	"36.000"	"29.000"	"0.000707812985548673"	"20"	"0"	"5.177E-07"	"1.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"601.30566"	"1801.90244"	"1801.90304"	"-0.33"	"-0.00020"	"10/122"	"10"	"122"	"5605121.88574219"	"HCD"	"MS2"	"4.8546"	"80.8"	"100.000"	"44.5806"	"13130"	"13130"	"13112"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.6"	""	"66.0"	""	"77.3"	""	"171.0"	"0.3"	"183.5"	"179.5"	""	"809"	"64"	"36.000"	"29.000"	"1.76570654141147E-05"	"19"	"0"	"7.23E-09"	"1.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30573"	"1801.90262"	"1801.90304"	"-0.23"	"-0.00014"	"9/122"	"9"	"122"	"132805.708190918"	"HCD"	"MS2"	"0"	"1.0"	"100.000"	"119.2252"	"39915"	"39915"	"39913"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	""	""	"4.3"	""	"5.2"	""	""	"809"	"3"	"36.000"	"29.000"	"18.235535698702"	"13"	"0.0006732"	"0.008579"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30573"	"1801.90262"	"1801.90304"	"-0.23"	"-0.00014"	"4/122"	"4"	"122"	"185583.983337402"	"HCD"	"MS2"	"15.87393"	"1.4"	"100.000"	"118.6765"	"39985"	"39985"	"39981"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.8"	""	""	""	""	""	"4.6"	""	"5.2"	""	""	"809"	"8"	"36.000"	"29.000"	"5.91450667067742"	"13"	"0.0008629"	"0.01085"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"601.30573"	"1801.90262"	"1801.90304"	"-0.23"	"-0.00014"	"21/122"	"21"	"122"	"5806850.33514404"	"HCD"	"MS2"	"1.854272"	"51.1"	"100.000"	"44.6026"	"13127"	"13127"	"13107"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"60.2"	""	"47.6"	""	"49.9"	""	"105.6"	"2.4"	"108.0"	"112.4"	""	"809"	"58"	"36.000"	"29.000"	"6.50007736843709E-05"	"20"	"0"	"8.729E-09"	"1.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9556"	"0.0000"	"1"	"1"	"1"	"601.30573"	"1801.90262"	"1801.90304"	"-0.23"	"-0.00014"	"9/122"	"9"	"122"	"3996405.37445068"	"HCD"	"MS2"	"14.25474"	"61.4"	"100.000"	"45.9287"	"13679"	"13679"	"13658"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.4"	""	"44.4"	""	"61.9"	""	"79.1"	"1.9"	"234.6"	"125.2"	""	"809"	"45"	"36.000"	"29.000"	"0.00119376413218655"	"17"	"0"	"1.494E-07"	"1.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"601.30573"	"1801.90262"	"1801.90304"	"-0.23"	"-0.00014"	"12/122"	"12"	"122"	"4097555.28540039"	"HCD"	"MS2"	"16.91971"	"64.8"	"100.000"	"46.1220"	"13746"	"13746"	"13725"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"45.5"	""	"46.0"	""	"64.6"	""	"87.4"	"2.1"	"251.4"	"124.7"	""	"809"	"57"	"36.000"	"29.000"	"7.97844996758458E-05"	"19"	"0"	"1.487E-08"	"1.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"901.45496"	"1801.90264"	"1801.90304"	"-0.23"	"-0.00020"	"12/122"	"12"	"122"	"643499.818237305"	"HCD"	"MS2"	"8.002121"	"33.4"	"100.000"	"43.9675"	"12884"	"12884"	"12865"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.4"	""	"25.8"	""	"33.4"	""	"72.9"	"0.4"	"74.5"	"68.2"	""	"809"	"70"	"36.000"	"29.000"	"3.61342068170118E-06"	"26"	"0"	"5.642E-07"	"1.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"901.45496"	"1801.90264"	"1801.90304"	"-0.23"	"-0.00020"	"14/122"	"14"	"122"	"2959278.11975098"	"HCD"	"MS2"	"0"	"126.9"	"100.000"	"43.5075"	"12689"	"12689"	"12666"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"141.2"	""	"98.0"	""	"116.4"	""	"273.9"	""	"303.1"	"276.9"	""	"809"	"84"	"36.000"	"29.000"	"1.44184483470915E-07"	"27"	"0"	"3.727E-09"	"1.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30579"	"1801.90281"	"1801.90304"	"-0.13"	"-0.00008"	"12/122"	"12"	"122"	"122001.279052734"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"114.3027"	"39333"	"39333"	"39330"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.6"	""	"2.5"	""	"4.1"	""	"5.2"	""	"6.3"	"4.8"	""	"809"	"31"	"36.000"	"29.000"	"0.0358029264176573"	"15"	"0"	"0.0005037"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30579"	"1801.90281"	"1801.90304"	"-0.13"	"-0.00008"	"13/122"	"13"	"122"	"151345.797363281"	"HCD"	"MS2"	"0"	"1.9"	"100.000"	"116.9356"	"39732"	"39732"	"39730"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.9"	""	""	""	"1.8"	""	"4.4"	""	"4.0"	"4.0"	""	"809"	"21"	"36.000"	"29.000"	"0.349879523144768"	"14"	"0"	"0.0005964"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"601.30579"	"1801.90281"	"1801.90304"	"-0.13"	"-0.00008"	"7/122"	"7"	"122"	"160832.258422852"	"HCD"	"MS2"	"10.94281"	"2.0"	"100.000"	"117.2300"	"39774"	"39774"	"39771"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.3"	""	"2.1"	""	"2.5"	""	"3.7"	""	"2.2"	"3.4"	""	"809"	"14"	"36.000"	"29.000"	"1.53432911421854"	"14"	"0"	"0.002752"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30585"	"1801.90299"	"1801.90304"	"-0.03"	"-0.00002"	"8/122"	"8"	"122"	"108589.087036133"	"HCD"	"MS2"	"0"	"0.7"	"100.000"	"116.6799"	"39688"	"39688"	"39686"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.4"	""	""	""	""	""	""	""	"4.3"	""	""	"812"	"9"	"36.000"	"29.000"	"5.72171252159281"	"13"	"0.0023"	"0.02351"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30585"	"1801.90299"	"1801.90304"	"-0.03"	"-0.00002"	"7/122"	"7"	"122"	"166324.545532227"	"HCD"	"MS2"	"0"	"1.4"	"100.000"	"116.4171"	"39648"	"39648"	"39646"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	"1.8"	""	"3.7"	""	""	""	"6.1"	"2.0"	""	"812"	"15"	"36.000"	"29.000"	"1.14690126981578"	"13"	"0"	"0.002771"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30585"	"1801.90299"	"1801.90304"	"-0.03"	"-0.00002"	"11/122"	"11"	"122"	"159429.339904785"	"HCD"	"MS2"	"0"	"1.2"	"100.000"	"117.0105"	"39586"	"39586"	"39583"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	"2.3"	""	"3.1"	""	"2.5"	"4.0"	""	"812"	"18"	"36.000"	"29.000"	"0.717011355198583"	"14"	"0"	"0.0009987"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30591"	"1801.90317"	"1801.90304"	"0.07"	"0.00004"	"10/122"	"10"	"122"	"135159.936645508"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"113.7849"	"39245"	"39245"	"39242"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.9"	""	""	""	"4.4"	""	"3.0"	""	"5.2"	"5.1"	""	"812"	"23"	"36.000"	"29.000"	"0.212581777253815"	"14"	"0"	"0.0007153"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30591"	"1801.90317"	"1801.90304"	"0.07"	"0.00004"	"8/122"	"8"	"122"	"138048.380004883"	"HCD"	"MS2"	"7.515731"	"1.2"	"100.000"	"118.1445"	"39907"	"39907"	"39905"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	"2.2"	""	"3.4"	""	"2.4"	""	""	"3.9"	""	"812"	"1"	"36.000"	"29.000"	"29.4120999790446"	"13"	"0.001134"	"0.01393"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30591"	"1801.90317"	"1801.90304"	"0.07"	"0.00004"	"9/122"	"9"	"122"	"193500.668701172"	"HCD"	"MS2"	"17.27852"	"1.6"	"100.000"	"118.3999"	"39944"	"39944"	"39942"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	""	""	"2.1"	""	"2.5"	""	"4.8"	"6.1"	""	"812"	"14"	"36.000"	"29.000"	"1.68083867976811"	"13"	"0"	"0.003359"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30597"	"1801.90335"	"1801.90304"	"0.17"	"0.00010"	"9/122"	"9"	"122"	"144091.910644531"	"HCD"	"MS2"	"4.666646"	"1.9"	"100.000"	"115.0165"	"39297"	"39297"	"39295"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.5"	""	""	""	"2.4"	""	"5.0"	""	"3.7"	"3.8"	""	"814"	"16"	"36.000"	"29.000"	"0.971839192145663"	"14"	"0"	"0.002261"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30597"	"1801.90335"	"1801.90304"	"0.17"	"0.00010"	"11/122"	"11"	"122"	"160033.840209961"	"HCD"	"MS2"	"0"	"1.9"	"100.000"	"117.8181"	"39860"	"39860"	"39858"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.6"	""	"2.7"	""	"2.5"	""	"3.8"	""	"3.0"	"3.1"	""	"814"	"18"	"36.000"	"29.000"	"0.657043932628379"	"14"	"0"	"0.003249"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30597"	"1801.90335"	"1801.90304"	"0.17"	"0.00010"	"6/122"	"6"	"122"	"166389.8046875"	"HCD"	"MS2"	"20.35108"	"1.0"	"100.000"	"114.6242"	"39386"	"39386"	"39383"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.5"	""	""	""	""	""	"3.1"	""	"3.9"	""	""	"814"	"8"	"36.000"	"29.000"	"6.95976233241746"	"13"	"0.001036"	"0.0136"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"601.30597"	"1801.90335"	"1801.90304"	"0.17"	"0.00010"	"13/122"	"13"	"122"	"33424002.8555298"	"HCD"	"MS2"	"3.195214"	"249.7"	"100.000"	"43.3325"	"12628"	"12628"	"12607"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"304.7"	""	"195.8"	""	"213.6"	""	"573.0"	"2.8"	"589.4"	"496.0"	""	"814"	"70"	"36.000"	"29.000"	"3.69482955782521E-06"	"23"	"0"	"1.589E-09"	"1.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30603"	"1801.90354"	"1801.90304"	"0.28"	"0.00017"	"10/122"	"10"	"122"	"131603.335510254"	"HCD"	"MS2"	"0"	"1.2"	"100.000"	"114.7615"	"39258"	"39258"	"39256"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	"2.6"	""	"3.7"	""	"2.0"	"3.4"	""	"827"	"8"	"36.000"	"29.000"	"6.34564122387508"	"13"	"0.0001301"	"0.004918"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30603"	"1801.90354"	"1801.90304"	"0.28"	"0.00017"	"11/122"	"11"	"122"	"170667.716247559"	"HCD"	"MS2"	"3.617244"	"1.7"	"100.000"	"117.5994"	"39676"	"39676"	"39674"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	"2.7"	""	"3.4"	""	"4.5"	"5.6"	""	"827"	"20"	"36.000"	"29.000"	"0.375383789228679"	"14"	"0"	"0.002277"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30609"	"1801.90372"	"1801.90304"	"0.38"	"0.00023"	"4/122"	"4"	"122"	"161892.560852051"	"HCD"	"MS2"	"23.75182"	"2.2"	"100.000"	"110.8359"	"38637"	"38637"	"38633"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.0"	""	"1.8"	""	"4.8"	""	"4.6"	""	"4.5"	"3.1"	""	"822"	"1"	"36.000"	"29.000"	"32.5718046827474"	"13"	"0.001211"	"0.01505"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30609"	"1801.90372"	"1801.90304"	"0.38"	"0.00023"	"8/122"	"8"	"122"	"192392.81072998"	"HCD"	"MS2"	"0"	"2.0"	"100.000"	"117.4968"	"39814"	"39814"	"39810"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.7"	""	"2.1"	""	""	""	"5.7"	""	"4.6"	"4.0"	""	"822"	"19"	"36.000"	"29.000"	"0.548077308619126"	"14"	"0"	"0.0007772"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30609"	"1801.90372"	"1801.90304"	"0.38"	"0.00023"	"6/122"	"6"	"122"	"183372.964416504"	"HCD"	"MS2"	"12.231"	"2.4"	"100.000"	"111.8340"	"38883"	"38883"	"38879"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.9"	""	"3.7"	""	"2.3"	""	"4.2"	""	"6.8"	"2.4"	""	"822"	"16"	"36.000"	"29.000"	"1.076073216378"	"13"	"0"	"0.001026"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30615"	"1801.90390"	"1801.90304"	"0.48"	"0.00029"	"7/122"	"7"	"122"	"130354.853881836"	"HCD"	"MS2"	"14.26997"	"2.5"	"100.000"	"110.9718"	"38552"	"38552"	"38548"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.0"	""	"3.6"	""	"2.6"	""	"4.8"	""	"5.6"	"4.1"	""	"821"	"8"	"36.000"	"29.000"	"5.96091819019767"	"13"	"0.0001301"	"0.004132"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9254"	"0.0000"	"1"	"1"	"1"	"601.30615"	"1801.90390"	"1801.90304"	"0.48"	"0.00029"	"12/122"	"12"	"122"	"13869697.9126587"	"HCD"	"MS2"	"1.514216"	"103.3"	"94.081"	"44.3006"	"13005"	"13005"	"12987"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"121.6"	""	"78.5"	""	"94.6"	""	"225.2"	""	"250.8"	"213.2"	""	"821"	"67"	"36.000"	"29.000"	"7.55636906603007E-06"	"22"	"0"	"1.561E-08"	"1.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30621"	"1801.90409"	"1801.90304"	"0.58"	"0.00035"	"10/122"	"10"	"122"	"105584.752807617"	"HCD"	"MS2"	"0"	"1.6"	"100.000"	"112.5803"	"39029"	"39029"	"39027"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	"2.3"	""	""	""	"4.3"	""	"3.2"	"6.2"	""	"822"	"16"	"36.000"	"29.000"	"1.14509580030684"	"13"	"0"	"0.002956"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30621"	"1801.90409"	"1801.90304"	"0.58"	"0.00035"	"7/122"	"7"	"122"	"116216.304382324"	"HCD"	"MS2"	"0"	"0.9"	"100.000"	"118.8576"	"39861"	"39861"	"39859"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	""	""	"2.5"	""	"2.3"	"3.7"	""	"822"	"4"	"36.000"	"29.000"	"16.9372080349003"	"13"	"0.004867"	"0.05118"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30621"	"1801.90409"	"1801.90304"	"0.58"	"0.00035"	"9/122"	"9"	"122"	"168677.565490723"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"114.0438"	"39285"	"39285"	"39282"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.0"	""	"2.8"	""	"4.1"	""	"3.2"	""	"4.0"	"4.0"	""	"822"	"10"	"36.000"	"29.000"	"4.04428564467826"	"13"	"0.0001301"	"0.004092"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30627"	"1801.90427"	"1801.90304"	"0.68"	"0.00041"	"8/122"	"8"	"122"	"118471.773986816"	"HCD"	"MS2"	"4.157726"	"1.6"	"100.000"	"114.2517"	"39177"	"39177"	"39175"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.0"	""	""	""	""	""	"6.3"	""	"3.8"	"3.1"	""	"827"	"15"	"36.000"	"29.000"	"1.29561364700449"	"13"	"0"	"0.00237"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30627"	"1801.90427"	"1801.90304"	"0.68"	"0.00041"	"10/122"	"10"	"122"	"112191.886108398"	"HCD"	"MS2"	"12.84848"	"2.6"	"100.000"	"113.0707"	"39120"	"39120"	"39117"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.5"	""	"4.2"	""	"2.8"	""	"5.6"	""	"3.5"	"5.2"	""	"827"	"17"	"36.000"	"29.000"	"0.91511466242193"	"14"	"0"	"0.001324"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30640"	"1801.90464"	"1801.90304"	"0.89"	"0.00053"	"8/122"	"8"	"122"	"186965.498596191"	"HCD"	"MS2"	"9.07517"	"1.7"	"100.000"	"117.9350"	"39724"	"39724"	"39720"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	"2.8"	""	"5.7"	""	"4.7"	"3.7"	""	"835"	"12"	"36.000"	"29.000"	"2.50990035399269"	"13"	"0"	"0.00252"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.30652"	"1801.90500"	"1801.90304"	"1.09"	"0.00065"	"9/122"	"9"	"122"	"147692.363037109"	"HCD"	"MS2"	"8.870777"	"1.6"	"100.000"	"119.4772"	"39952"	"39952"	"39949"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	"2.1"	""	""	""	"6.8"	""	"2.7"	"3.9"	""	"832"	"14"	"36.000"	"29.000"	"1.81172939453196"	"13"	"0.0003538"	"0.007375"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8788"	"0.0000"	"1"	"1"	"1"	"601.30737"	"1801.90757"	"1801.90304"	"2.51"	"0.00151"	"10/122"	"10"	"122"	"279723785.71582"	"HCD"	"MS2"	"1.945572"	"80.0"	"4.305"	"43.9728"	"12876"	"12876"	"12865"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.9"	""	"56.6"	""	"62.0"	""	"182.8"	"1.9"	"197.3"	"169.0"	""	"852"	"66"	"36.000"	"29.000"	"1.14132570637291E-05"	"24"	"0"	"2.529E-08"	"1.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8941"	"0.0000"	"1"	"1"	"1"	"601.30737"	"1801.90757"	"1801.90304"	"2.51"	"0.00151"	"14/122"	"14"	"122"	"880315889.671875"	"HCD"	"MS2"	"1.506798"	"95.1"	"1.630"	"43.6466"	"12755"	"12755"	"12741"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"108.8"	""	"68.5"	""	"83.7"	""	"209.8"	"1.7"	"224.0"	"209.1"	""	"852"	"85"	"36.000"	"29.000"	"1.40737424481683E-07"	"27"	"0"	"4.964E-10"	"1.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8861"	"0.0000"	"1"	"1"	"1"	"601.30756"	"1801.90812"	"1801.90304"	"2.82"	"0.00169"	"11/122"	"11"	"122"	"97378601.0869141"	"HCD"	"MS2"	"1.553019"	"73.1"	"11.068"	"43.9608"	"12882"	"12882"	"12865"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"78.4"	""	"58.4"	""	"57.8"	""	"152.9"	"1.3"	"196.3"	"151.8"	""	"855"	"79"	"36.000"	"29.000"	"5.48196324085449E-07"	"26"	"0"	"4.972E-10"	"1.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALqR.[M]"	"N-Term(TMT6plex); Q14(Deamidated)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"901.95685"	"1802.90642"	"1802.88706"	"10.74"	"0.00968"	"11/122"	"11"	"122"	"1373811.51086426"	"HCD"	"MS2"	"0"	"67.2"	"100.000"	"43.4800"	"12678"	"12678"	"12650"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"77.6"	""	"51.4"	""	"55.3"	""	"160.1"	""	"164.5"	"135.9"	""	"876"	"34"	"36.000"	"29.000"	"0.0168063773525618"	"18"	"0"	"0.002316"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHDGNLLVSADDFGK"	"[R].SHDGNLLVSADDFGk.[V]"	"K15(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.97363"	"1803.90635"	"1803.90746"	"-0.62"	"-0.00037"	"10/154"	"10"	"154"	"528791.069274902"	"HCD"	"MS2"	"3.785203"	"22.7"	"100.000"	"72.4579"	"24444"	"24444"	"24420"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.6"	""	"30.1"	""	"27.1"	""	"36.4"	""	"33.2"	"57.4"	""	"822"	"23"	"36.000"	"29.000"	"0.20789393608328"	"14"	"0.0001301"	"0.005001"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHDGNLLVSADDFGK"	"[R].SHDGNLLVSADDFGk.[V]"	"K15(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"601.97394"	"1803.90726"	"1803.90746"	"-0.11"	"-0.00007"	"14/154"	"14"	"154"	"514705.879821777"	"HCD"	"MS2"	"8.060013"	"22.0"	"100.000"	"72.5313"	"24460"	"24460"	"24441"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.2"	""	"26.4"	""	"27.0"	""	"31.3"	""	"33.6"	"57.1"	""	"816"	"42"	"36.000"	"29.000"	"0.00233700780642218"	"16"	"0"	"0.0003048"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLPAEQDLTTK"	"[R].eTLPAEQDLTTk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"902.50800"	"1804.00871"	"1804.01042"	"-0.94"	"-0.00085"	"10/118"	"10"	"118"	"169446.497802734"	"HCD"	"MS2"	"0"	"13.7"	"100.000"	"71.0361"	"23865"	"23865"	"23841"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.3"	""	"14.2"	""	"15.2"	""	"19.1"	""	"30.2"	"23.9"	""	"1116"	"25"	"37.000"	"30.000"	"0.191264424892919"	"19"	"0.000936"	"0.01325"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLPAEQDLTTK"	"[R].eTLPAEQDLTTk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"902.50824"	"1804.00920"	"1804.01042"	"-0.67"	"-0.00061"	"8/118"	"8"	"118"	"155116.132385254"	"HCD"	"MS2"	"29.06952"	"11.3"	"100.000"	"71.1253"	"23888"	"23888"	"23861"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.6"	""	"12.0"	""	"10.8"	""	"19.4"	""	"17.0"	"23.3"	""	"1125"	"12"	"37.000"	"30.000"	"3.73355477101074"	"13"	"0.001374"	"0.01699"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLPAEQDLTTK"	"[R].eTLPAEQDLTTk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"602.00806"	"1804.00962"	"1804.01042"	"-0.44"	"-0.00027"	"10/118"	"10"	"118"	"2318000.52972412"	"HCD"	"MS2"	"14.22984"	"58.3"	"100.000"	"71.0960"	"23890"	"23890"	"23873"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"81.3"	""	"55.9"	""	"60.3"	""	"106.2"	"1.0"	"125.3"	"124.2"	""	"1124"	"38"	"37.000"	"30.000"	"0.00934837909508035"	"17"	"0"	"0.0004432"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDIAENEMPGLMR"	"[K].aLDIAENEMPGLmR.[M]"	"N-Term(TMT6plex); M13(Oxidation)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.0286"	"0.0000"	"1"	"1"	"1"	"602.30896"	"1804.91233"	"1804.91347"	"-0.63"	"-0.00038"	"8/128"	"8"	"128"	"203861.969482422"	"HCD"	"MS2"	"37.54351"	"5.6"	"100.000"	"94.6866"	"33199"	"33199"	"33190"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.0"	""	"6.4"	""	"9.6"	""	"9.9"	""	"9.9"	"10.2"	""	"996"	"35"	"36.000"	"29.000"	"0.016077900726129"	"16"	"0"	"0.0002576"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDIAENEMPGLMR"	"[K].aLDIAENEmPGLMR.[M]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	""	"0.0286"	"2"	"2"	"2"	"602.30896"	"1804.91233"	"1804.91347"	"-0.63"	"-0.00038"	"8/128"	"8"	"128"	"203861.969482422"	"HCD"	"MS2"	"37.54351"	"5.6"	"100.000"	"94.6866"	"33199"	"33199"	"33190"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.0"	""	"6.4"	""	"9.6"	""	"9.9"	""	"9.9"	"10.2"	""	"996"	"34"	"36.000"	"29.000"	"0.0210974197092672"	"16"	"0"	"0.0007441"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDIAENEMPGLMR"	"[K].aLDIAENEmPGLMR.[M]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"1"	"602.30927"	"1804.91324"	"1804.91347"	"-0.13"	"-0.00008"	"13/128"	"13"	"128"	"331890.637268066"	"HCD"	"MS2"	"11.76292"	"7.4"	"100.000"	"84.9474"	"29453"	"29453"	"29433"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.3"	""	"11.5"	""	"11.7"	""	"9.4"	""	"14.4"	"15.4"	""	"1016"	"36"	"37.000"	"30.000"	"0.0131784311595636"	"17"	"0"	"0.0002984"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDIAENEMPGLMR"	"[K].aLDIAENEmPGLMR.[M]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.4565"	"0.0000"	"1"	"1"	"1"	"602.30927"	"1804.91324"	"1804.91347"	"-0.13"	"-0.00008"	"16/128"	"16"	"128"	"417506.125610352"	"HCD"	"MS2"	"27.00303"	"10.3"	"100.000"	"84.9312"	"29445"	"29445"	"29426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.7"	""	"13.3"	""	"12.9"	""	"15.0"	""	"18.6"	"27.7"	""	"1016"	"46"	"37.000"	"30.000"	"0.0012186071228619"	"21"	"0"	"5.311E-05"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGADTSVDLEETGR"	"[R].iLGADTSVDLEETGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"902.97705"	"1804.94682"	"1804.94899"	"-1.20"	"-0.00108"	"10/128"	"10"	"128"	"118992.578063965"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"86.7173"	"30142"	"30142"	"30124"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.9"	""	"4.8"	""	"7.9"	""	"9.5"	""	"10.5"	"10.1"	""	"1199"	"18"	"37.000"	"30.000"	"1.03226021070411"	"17"	"0.0002479"	"0.005352"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGADTSVDLEETGR"	"[R].iLGADTSVDLEETGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"602.32062"	"1804.94730"	"1804.94899"	"-0.94"	"-0.00056"	"17/128"	"17"	"128"	"468782.414672852"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"86.8121"	"30180"	"30180"	"30160"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.0"	""	"10.4"	""	"8.7"	""	"15.7"	""	"17.5"	"20.8"	""	"1179"	"65"	"37.000"	"30.000"	"2.03931263228499E-05"	"22"	"0"	"9.987E-06"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGADTSVDLEETGR"	"[R].iLGADTSVDLEETGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"902.97748"	"1804.94768"	"1804.94899"	"-0.73"	"-0.00065"	"12/128"	"12"	"128"	"126883.288269043"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"86.7333"	"30152"	"30152"	"30130"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.4"	""	"7.7"	""	"9.2"	""	"10.6"	""	"12.6"	"10.3"	""	"1172"	"38"	"37.000"	"30.000"	"0.00933034314051987"	"22"	"0"	"0.000597"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGADTSVDLEETGR"	"[R].iLGADTSVDLEETGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"902.97784"	"1804.94841"	"1804.94899"	"-0.32"	"-0.00029"	"7/128"	"7"	"128"	"146245.428466797"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"86.9928"	"30251"	"30251"	"30238"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.1"	""	"7.2"	""	"10.2"	""	"14.7"	""	"16.3"	"14.3"	""	"1166"	"44"	"37.000"	"30.000"	"0.0023316778911072"	"18"	"0"	"0.0004361"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGADTSVDLEETGR"	"[R].iLGADTSVDLEETGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.8986"	"0.0000"	"1"	"1"	"1"	"602.32104"	"1804.94858"	"1804.94899"	"-0.23"	"-0.00014"	"15/128"	"15"	"128"	"414579.781433105"	"HCD"	"MS2"	"9.096342"	"6.8"	"100.000"	"86.8492"	"30198"	"30198"	"30182"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.0"	""	"7.3"	""	"11.3"	""	"13.1"	""	"11.0"	"12.6"	""	"1171"	"69"	"37.000"	"30.000"	"7.63004148783823E-06"	"24"	"0"	"2.27E-06"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGADTSVDLEETGR"	"[R].iLGADTSVDLEETGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"902.97809"	"1804.94890"	"1804.94899"	"-0.05"	"-0.00004"	"11/128"	"11"	"128"	"138648.454345703"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"87.0436"	"30276"	"30276"	"30257"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.4"	""	"5.8"	""	"7.9"	""	"10.6"	""	"14.1"	"11.2"	""	"1156"	"23"	"37.000"	"30.000"	"0.281791467279757"	"14"	"0"	"0.0007007"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEESLMPSQAVK"	"[R].qEESLMPSQAVk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.6538"	"0.0000"	"1"	"1"	"1"	"602.33282"	"1804.98392"	"1804.98791"	"-2.21"	"-0.00133"	"10/122"	"10"	"122"	"1256000.49029541"	"HCD"	"MS2"	"5.836292"	"30.9"	"100.000"	"65.9063"	"21759"	"21759"	"21737"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"50.4"	""	"37.3"	""	"37.2"	""	"48.1"	""	"62.8"	"59.2"	""	"1177"	"26"	"37.000"	"30.000"	"0.150572779444397"	"23"	"0"	"0.0008992"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEESLMPSQAVK"	"[R].qEESLMPSQAVk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.8788"	"0.0000"	"1"	"1"	"1"	"602.33350"	"1804.98594"	"1804.98791"	"-1.09"	"-0.00066"	"12/122"	"12"	"122"	"1241346.75952148"	"HCD"	"MS2"	"4.48935"	"33.2"	"100.000"	"65.8172"	"21738"	"21738"	"21718"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"51.4"	""	"42.8"	""	"44.6"	""	"47.2"	""	"59.6"	"71.1"	""	"1174"	"33"	"37.000"	"30.000"	"0.0301049632402931"	"18"	"0"	"0.001251"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEESLMPSQAVK"	"[R].qEESLMPSQAVk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"902.99744"	"1804.98760"	"1804.98791"	"-0.17"	"-0.00015"	"4/122"	"4"	"122"	"114190.165283203"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"65.7771"	"21707"	"21707"	"21676"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.7"	""	"8.1"	""	"8.7"	""	"12.9"	""	"18.3"	"17.1"	""	"1202"	"13"	"37.000"	"30.000"	"2.81108819913606"	"23"	"0.003111"	"0.03174"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEESLMPSQAVK"	"[R].qEESLMPSQAVk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"902.99829"	"1804.98931"	"1804.98791"	"0.78"	"0.00070"	"10/122"	"10"	"122"	"115524.672363281"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"65.7112"	"21695"	"21695"	"21670"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.4"	""	"9.1"	""	"7.7"	""	"12.3"	""	"18.2"	"19.4"	""	"1226"	"32"	"37.000"	"30.000"	"0.0429992097931442"	"24"	"0"	"0.0009339"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPILSEFQEK"	"[K].eQPILSEFQEk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"602.67273"	"1806.00364"	"1806.00494"	"-0.72"	"-0.00043"	"13/116"	"13"	"116"	"1162917.62188721"	"HCD"	"MS2"	"9.231552"	"30.0"	"100.000"	"89.3914"	"31181"	"31181"	"31175"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.2"	""	"23.3"	""	"30.3"	""	"59.3"	"0.0"	"66.3"	"65.8"	""	"1163"	"40"	"37.000"	"30.000"	"0.00546449105093337"	"22"	"0"	"0.0002321"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPILSEFQEK"	"[K].eQPILSEFQEk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"602.67279"	"1806.00382"	"1806.00494"	"-0.62"	"-0.00037"	"12/116"	"12"	"116"	"662095.801330566"	"HCD"	"MS2"	"32.88185"	"19.8"	"100.000"	"89.1267"	"31080"	"31080"	"31066"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.0"	""	"25.6"	""	"16.7"	""	"35.1"	"0.9"	"39.4"	"41.6"	""	"1159"	"40"	"37.000"	"30.000"	"0.00523664870022074"	"21"	"0"	"0.0002813"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPILSEFQEK"	"[K].eQPILSEFQEk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"3"	"3"	"0.8444"	"0.0000"	"1"	"1"	"1"	"602.67291"	"1806.00418"	"1806.00494"	"-0.42"	"-0.00025"	"14/116"	"14"	"116"	"1021971.87286377"	"HCD"	"MS2"	"9.517682"	"24.8"	"100.000"	"89.3952"	"31182"	"31182"	"31169"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"30.8"	""	"21.6"	""	"25.1"	""	"49.5"	""	"58.4"	"52.7"	""	"1158"	"45"	"37.000"	"30.000"	"0.00201687305405851"	"22"	"0"	"3.457E-05"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPILSEFQEK"	"[K].eQPILSEFQEk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"602.67316"	"1806.00492"	"1806.00494"	"-0.01"	"-0.00001"	"12/116"	"12"	"116"	"588667.223876953"	"HCD"	"MS2"	"36.70385"	"17.3"	"100.000"	"89.1148"	"31073"	"31073"	"31062"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.0"	""	"14.8"	""	"20.6"	""	"32.4"	""	"40.8"	"33.3"	""	"1151"	"42"	"37.000"	"30.000"	"0.00371574008809445"	"21"	"0"	"0.0002055"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPILSEFQEK"	"[K].eQPILSEFQEk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"903.50629"	"1806.00530"	"1806.00494"	"0.20"	"0.00018"	"12/116"	"12"	"116"	"230485.162353516"	"HCD"	"MS2"	"6.082226"	"18.4"	"100.000"	"89.1890"	"31102"	"31102"	"31085"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.5"	""	"15.6"	""	"19.3"	""	"36.6"	"1.8"	"49.5"	"31.6"	""	"1162"	"27"	"37.000"	"30.000"	"0.124788950546984"	"19"	"0.0003538"	"0.00698"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEYEEAQDAIVK"	"[K].gEYEEAQDAIVk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P54275"	"DNA mismatch repair protein Msh2 OS=Rattus norvegicus OX=10116 GN=Msh2 PE=2 SV=1"	"P54275"	"DNA mismatch repair protein Msh2 OS=Rattus norvegicus OX=10116 GN=Msh2 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"905.48462"	"1809.96196"	"1809.96347"	"-0.83"	"-0.00075"	"6/110"	"6"	"110"	"169141.996826172"	"HCD"	"MS2"	"45.81239"	"14.0"	"100.000"	"91.4475"	"31982"	"31982"	"31970"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.0"	""	"8.8"	""	"16.0"	""	"27.4"	""	"29.9"	"30.2"	""	"1190"	"12"	"37.000"	"30.000"	"3.50361974936575"	"17"	"0.007018"	"0.08156"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEYEEAQDAIVK"	"[K].gEYEEAQDAIVk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P54275"	"DNA mismatch repair protein Msh2 OS=Rattus norvegicus OX=10116 GN=Msh2 PE=2 SV=1"	"P54275"	"DNA mismatch repair protein Msh2 OS=Rattus norvegicus OX=10116 GN=Msh2 PE=2 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"905.48486"	"1809.96245"	"1809.96347"	"-0.56"	"-0.00051"	"5/110"	"5"	"110"	"156806.563720703"	"HCD"	"MS2"	"13.75021"	"14.5"	"100.000"	"91.4208"	"31966"	"31966"	"31954"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.2"	""	"13.2"	""	"17.5"	""	"23.4"	""	"32.7"	"26.9"	""	"1194"	"9"	"37.000"	"30.000"	"6.87027832199828"	"16"	"0.008668"	"0.1092"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GEYEEAQDAIVK"	"[K].gEYEEAQDAIVk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P54275"	"DNA mismatch repair protein Msh2 OS=Rattus norvegicus OX=10116 GN=Msh2 PE=2 SV=1"	"P54275"	"DNA mismatch repair protein Msh2 OS=Rattus norvegicus OX=10116 GN=Msh2 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"905.48492"	"1809.96257"	"1809.96347"	"-0.49"	"-0.00045"	"5/110"	"5"	"110"	"386170.568115234"	"HCD"	"MS2"	"7.644336"	"33.8"	"100.000"	"91.7037"	"32074"	"32074"	"32060"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.0"	""	"29.3"	""	"40.5"	""	"62.0"	"0.7"	"68.1"	"68.6"	""	"1194"	"19"	"37.000"	"30.000"	"0.763790638582042"	"20"	"0.000936"	"0.01148"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEEVSNFQK"	"[K].eLEEEVSNFQk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"603.99243"	"1809.96274"	"1809.96347"	"-0.40"	"-0.00024"	"8/98"	"8"	"98"	"313442.541564941"	"HCD"	"MS2"	"51.44014"	"13.8"	"100.000"	"83.9388"	"29052"	"29052"	"29033"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.4"	""	"12.3"	""	"21.3"	""	"21.6"	""	"30.0"	"29.4"	""	"1196"	"8"	"37.000"	"30.000"	"8.80442876454765"	"19"	"0.00736"	"0.08456"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEYEEAQDAIVK"	"[K].gEYEEAQDAIVk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P54275"	"DNA mismatch repair protein Msh2 OS=Rattus norvegicus OX=10116 GN=Msh2 PE=2 SV=1"	"P54275"	"DNA mismatch repair protein Msh2 OS=Rattus norvegicus OX=10116 GN=Msh2 PE=2 SV=1"	"0"	"2"	"2"	"0.0556"	"0.0000"	"1"	"1"	"1"	"905.48523"	"1809.96318"	"1809.96347"	"-0.16"	"-0.00014"	"5/110"	"5"	"110"	"503798.976867676"	"HCD"	"MS2"	"4.673014"	"43.3"	"100.000"	"91.7224"	"32084"	"32084"	"32074"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"73.6"	""	"43.7"	""	"46.7"	""	"71.7"	""	"96.9"	"80.9"	""	"1189"	"18"	"37.000"	"30.000"	"1.00496713386192"	"19"	"0.000936"	"0.01268"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVANYDSVEAGEK"	"[K].aVANYDSVEAGEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.2273"	"0.0000"	"1"	"1"	"1"	"905.98401"	"1810.96074"	"1810.95871"	"1.12"	"0.00101"	"8/126"	"8"	"126"	"101618.319946289"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"57.4985"	"18379"	"18379"	"18351"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.5"	""	"9.0"	""	"9.3"	""	"12.9"	""	"8.0"	"11.6"	""	"1189"	"22"	"37.000"	"30.000"	"0.359047460164258"	""	"0.0005778"	"0.008108"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVANYDSVEAGEK"	"[K].aVANYDSVEAGEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"905.98438"	"1810.96147"	"1810.95871"	"1.52"	"0.00138"	"9/126"	"9"	"126"	"130165.612121582"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"57.3767"	"18344"	"18344"	"18313"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.5"	""	"10.2"	""	"9.3"	""	"15.4"	""	"15.9"	"20.2"	""	"1195"	"31"	"37.000"	"30.000"	"0.0514443766930299"	"25"	"0.0003538"	"0.007088"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGDASPAAAEPGAK"	"[K].vNGDASPAAAEPGAk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"906.99591"	"1812.98454"	"1812.98560"	"-0.58"	"-0.00053"	"5/152"	"5"	"152"	"92388.1139526367"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"44.6412"	"13155"	"13155"	"13128"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.9"	""	"3.6"	""	"6.0"	""	"10.8"	""	"13.2"	"9.9"	""	"1124"	"11"	"37.000"	"30.000"	"4.81655269019467"	"18"	"0.004938"	"0.0526"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGDASPAAAEPGAK"	"[K].vNGDASPAAAEPGAk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"906.99597"	"1812.98467"	"1812.98560"	"-0.51"	"-0.00047"	"4/152"	"4"	"152"	"102280.295349121"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"44.7388"	"13183"	"13183"	"13153"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.3"	""	"3.7"	""	"6.1"	""	"11.1"	""	"13.0"	"10.4"	""	"1122"	"13"	"37.000"	"30.000"	"2.69750874480298"	"19"	"0.001978"	"0.0221"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGDASPAAAEPGAK"	"[K].vnGDASPAAAEPGAk.[E]"	"N-Term(TMT6plex); N2(Deamidated); K15(TMT6plex)"	"1"	"1"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"0"	"3"	"3"	"0.8596"	"0.0000"	"1"	"1"	"1"	"605.32764"	"1813.96836"	"1813.96961"	"-0.69"	"-0.00042"	"13/152"	"13"	"152"	"3306522.0927124"	"HCD"	"MS2"	"14.48372"	"90.9"	"100.000"	"48.0709"	"14539"	"14539"	"14524"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"79.7"	""	"96.1"	""	"101.9"	""	"179.7"	""	"227.8"	"187.5"	""	"1061"	"57"	"37.000"	"30.000"	"0.000102963995806297"	"25"	"0"	"2.203E-07"	"1.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGDASPAAAEPGAK"	"[K].vnGDASPAAAEPGAk.[E]"	"N-Term(TMT6plex); N2(Deamidated); K15(TMT6plex)"	"1"	"1"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"0"	"2"	"2"	"0.8833"	"0.0000"	"1"	"1"	"1"	"907.48804"	"1813.96880"	"1813.96961"	"-0.45"	"-0.00041"	"9/152"	"9"	"152"	"174826.86505127"	"HCD"	"MS2"	"0"	"11.3"	"100.000"	"47.9950"	"14509"	"14509"	"14483"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.2"	""	"11.3"	""	"12.4"	""	"22.3"	""	"26.9"	"26.8"	""	"1061"	"60"	"37.000"	"30.000"	"5.83022597818952E-05"	"23"	"0"	"1.654E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGDASPAAAEPGAK"	"[K].vnGDASPAAAEPGAk.[E]"	"N-Term(TMT6plex); N2(Deamidated); K15(TMT6plex)"	"1"	"1"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"605.32782"	"1813.96891"	"1813.96961"	"-0.39"	"-0.00024"	"13/152"	"13"	"152"	"3959907.43652344"	"HCD"	"MS2"	"11.18584"	"111.2"	"100.000"	"47.7288"	"14412"	"14412"	"14397"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"105.0"	""	"104.6"	""	"124.9"	""	"210.7"	""	"283.9"	"231.7"	""	"1061"	"57"	"37.000"	"30.000"	"0.000102490919217748"	"25"	"0"	"4.586E-07"	"1.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGDASPAAAEPGAK"	"[K].vnGDASPAAAEPGAk.[E]"	"N-Term(TMT6plex); N2(Deamidated); K15(TMT6plex)"	"1"	"1"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"907.48810"	"1813.96892"	"1813.96961"	"-0.38"	"-0.00035"	"4/152"	"4"	"152"	"96604.1775512695"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"49.2710"	"15029"	"15029"	"14998"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.9"	""	"5.0"	""	"8.4"	""	"10.1"	""	"14.3"	"12.8"	""	"1061"	"12"	"37.000"	"30.000"	"3.2785770027343"	"14"	"0.001374"	"0.01755"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGDASPAAAEPGAK"	"[K].vnGDASPAAAEPGAk.[E]"	"N-Term(TMT6plex); N2(Deamidated); K15(TMT6plex)"	"1"	"1"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"907.48871"	"1813.97014"	"1813.96961"	"0.29"	"0.00026"	"14/152"	"14"	"152"	"168746.773925781"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"49.0236"	"14940"	"14940"	"14919"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.3"	""	"8.9"	""	"13.6"	""	"28.9"	"1.6"	"23.0"	"22.4"	""	"1053"	"48"	"37.000"	"30.000"	"0.000747133785169308"	"23"	"0"	"0.000136"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGDASPAAAEPGAK"	"[K].vnGDASPAAAEPGAk.[E]"	"N-Term(TMT6plex); N2(Deamidated); K15(TMT6plex)"	"1"	"1"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"907.48877"	"1813.97026"	"1813.96961"	"0.36"	"0.00032"	"14/152"	"14"	"152"	"286707.071105957"	"HCD"	"MS2"	"0"	"19.6"	"100.000"	"47.6804"	"14393"	"14393"	"14365"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.4"	""	"16.0"	""	"22.0"	""	"42.3"	""	"52.8"	"40.5"	""	"1056"	"56"	"37.000"	"30.000"	"0.000140163173672309"	"23"	"0"	"0.000154"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGDASPAAAEPGAK"	"[K].vnGDASPAAAEPGAk.[E]"	"N-Term(TMT6plex); N2(Deamidated); K15(TMT6plex)"	"1"	"1"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"907.48901"	"1813.97075"	"1813.96961"	"0.63"	"0.00057"	"9/152"	"9"	"152"	"142371.443847656"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"49.6070"	"15166"	"15166"	"15137"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.5"	""	"11.1"	""	"14.2"	""	"18.7"	""	"23.7"	"23.0"	""	"1058"	"22"	"37.000"	"30.000"	"0.310067089027921"	"17"	"0.0003538"	"0.006199"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLEVQEADEVK"	"[K].vPLEVQEADEVk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"3"	"3"	"0.6970"	"0.0000"	"1"	"1"	"1"	"605.34991"	"1814.03519"	"1814.03115"	"2.23"	"0.00135"	"10/112"	"10"	"112"	"520922.718811035"	"HCD"	"MS2"	"10.72352"	"20.4"	"100.000"	"83.2720"	"28791"	"28791"	"28777"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.6"	""	"20.3"	""	"25.3"	""	"41.2"	""	"37.0"	"35.2"	""	"906"	"33"	"36.000"	"29.000"	"0.0243275403755724"	"24"	"0"	"0.0003934"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTELNEPLSNEDR"	"[K].aVTELNEPLSNEDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"908.46698"	"1815.92668"	"1815.92859"	"-1.05"	"-0.00095"	"15/140"	"15"	"140"	"245633.717529297"	"HCD"	"MS2"	"17.45778"	"14.7"	"100.000"	"63.1117"	"20642"	"20642"	"20618"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.0"	""	"11.9"	""	"20.6"	""	"20.1"	""	"32.3"	"30.4"	""	"928"	"38"	"36.000"	"29.000"	"0.00728648341210768"	"27"	"0"	"0.0001615"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTELNEPLSNEDR"	"[K].aVTELNEPLSNEDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"908.46771"	"1815.92815"	"1815.92859"	"-0.24"	"-0.00022"	"7/140"	"7"	"140"	"210694.130065918"	"HCD"	"MS2"	"20.77344"	"13.5"	"100.000"	"63.2422"	"20680"	"20680"	"20657"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.3"	""	"13.7"	""	"18.8"	""	"20.0"	""	"30.4"	"24.8"	""	"934"	"37"	"36.000"	"29.000"	"0.00973457242406434"	"28"	"0"	"0.0001139"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTELNEPLSNEDR"	"[K].aVTELNEPLSNEDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.5814"	"0.0000"	"1"	"1"	"1"	"908.46826"	"1815.92925"	"1815.92859"	"0.36"	"0.00033"	"6/140"	"6"	"140"	"134580.611206055"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"63.5464"	"20804"	"20804"	"20779"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.0"	""	"13.2"	""	"9.5"	""	"13.4"	""	"16.2"	"15.7"	""	"951"	"43"	"36.000"	"29.000"	"0.0021935650670346"	""	"0"	"8.646E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTELNEPLSNEDR"	"[K].aVTELNEPLSNEDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"908.46844"	"1815.92961"	"1815.92859"	"0.56"	"0.00051"	"6/140"	"6"	"140"	"164381.124938965"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"63.4320"	"20772"	"20772"	"20747"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.0"	""	"5.0"	""	"12.9"	""	"13.1"	""	"17.1"	"14.9"	""	"954"	"42"	"36.000"	"29.000"	"0.0032848714535622"	""	"0"	"9.524E-05"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQAFEAELSANQSR"	"[K].hQAFEAELSANQSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"606.30914"	"1816.91288"	"1816.91394"	"-0.59"	"-0.00035"	"14/144"	"14"	"144"	"6267579.59503174"	"HCD"	"MS2"	"27.00435"	"114.9"	"100.000"	"40.9054"	"11638"	"11638"	"11625"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"152.9"	""	"135.0"	""	"140.6"	""	"204.7"	"0.7"	"238.5"	"217.7"	""	"882"	"14"	"36.000"	"29.000"	"1.83416579227863"	"19"	"0"	"0.001206"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEEMLPEEPLK"	"[R].gAEEmLPEEPLk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"3"	"3"	"0.4091"	"0.0000"	"1"	"1"	"1"	"606.33038"	"1816.97660"	"1816.97667"	"-0.04"	"-0.00003"	"11/100"	"11"	"100"	"445734.330200195"	"HCD"	"MS2"	"45.70746"	"18.1"	"100.000"	"70.5405"	"23649"	"23649"	"23621"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.3"	""	"18.3"	""	"23.9"	""	"35.8"	""	"39.0"	"31.0"	""	"1183"	"22"	"37.000"	"30.000"	"0.409218019298551"	"27"	"0"	"0.002847"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEEMLPEEPLK"	"[R].gAEEmLPEEPLk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"606.33081"	"1816.97788"	"1816.97667"	"0.66"	"0.00040"	"9/100"	"9"	"100"	"515885.457519531"	"HCD"	"MS2"	"20.22489"	"19.0"	"100.000"	"70.4674"	"23633"	"23633"	"23608"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.5"	""	"22.3"	""	"20.6"	""	"35.9"	""	"38.9"	"38.7"	""	"1178"	"11"	"37.000"	"30.000"	"5.013203045012"	"15"	"0.0001301"	"0.004839"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQIGGPESEQSGAK"	"[R].aQIGGPESEQSGAk.[-]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"606.33130"	"1816.97934"	"1816.98051"	"-0.64"	"-0.00039"	"10/136"	"10"	"136"	"6617669.23278809"	"HCD"	"MS2"	"37.08319"	"113.4"	"100.000"	"40.8321"	"11609"	"11609"	"11590"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"134.2"	""	"114.4"	""	"139.4"	""	"214.6"	""	"250.9"	"224.2"	""	"1190"	"17"	"37.000"	"30.000"	"1.14687732334861"	"14"	"0"	"0.002807"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQIGGPESEQSGAK"	"[R].aQIGGPESEQSGAk.[-]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"908.99426"	"1816.98125"	"1816.98051"	"0.41"	"0.00037"	"12/136"	"12"	"136"	"162094.174682617"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"40.6665"	"11542"	"11542"	"11519"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.8"	""	"16.2"	""	"15.8"	""	"21.0"	""	"22.9"	"24.3"	""	"1184"	"39"	"37.000"	"30.000"	"0.00775035698415648"	"24"	"0"	"0.0006232"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQIGGPESEQSGAK"	"[R].aQIGGPESEQSGAk.[-]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"908.99438"	"1816.98149"	"1816.98051"	"0.54"	"0.00049"	"15/136"	"15"	"136"	"242495.919067383"	"HCD"	"MS2"	"0"	"20.7"	"100.000"	"40.9015"	"11628"	"11628"	"11598"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.0"	""	"23.0"	""	"24.5"	""	"44.9"	""	"35.2"	"41.7"	""	"1187"	"47"	"37.000"	"30.000"	"0.00110007101849669"	"19"	"0"	"4.317E-05"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVESIEEVSK"	"[K].eIPVESIEEVSk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"606.34747"	"1817.02787"	"1817.03082"	"-1.62"	"-0.00098"	"10/108"	"10"	"108"	"172764.433166504"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"92.2741"	"32300"	"32300"	"32279"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.1"	""	"5.3"	""	"8.0"	""	"8.3"	""	"11.5"	"9.7"	""	"1071"	"22"	"37.000"	"30.000"	"0.333241802708085"	"18"	"0.003967"	"0.04119"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVESIEEVSK"	"[K].eIPVESIEEVSk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"0"	"3"	"3"	"0.9032"	"0.0000"	"1"	"1"	"1"	"606.34894"	"1817.03226"	"1817.03082"	"0.79"	"0.00048"	"10/108"	"10"	"108"	"188646.977355957"	"HCD"	"MS2"	"27.4165"	"6.0"	"100.000"	"92.2771"	"32291"	"32291"	"32276"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.0"	""	"6.6"	""	"8.6"	""	"11.7"	""	"11.7"	"13.3"	""	"1074"	"31"	"37.000"	"30.000"	"0.0422643589066268"	"17"	"0.0003538"	"0.00687"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKMPYTDAVIHEIQR"	"[R].TKmPYTDAVIHEIQR.[F]"	"M3(Oxidation)"	"1"	"3"	"P33272"	"Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1"	"Q64583; P33272; P04167"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"1"	"3"	"3"	"0.0877"	"0.0000"	"1"	"1"	"1"	"606.65137"	"1817.93955"	"1817.92144"	"9.96"	"0.00603"	"13/160"	"13"	"160"	"1212213.87408447"	"HCD"	"MS2"	"7.01737"	"16.0"	"100.000"	"69.9384"	"23403"	"23403"	"23385"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.7"	""	"13.4"	""	"20.2"	""	"33.5"	""	"33.0"	"33.0"	"NoQuanLabels"	"1113"	"57"	"37.000"	"30.000"	"0.00010702005471385"	""	"0"	"0.0003031"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKMPYTDAVIHEIQR"	"[R].TKmPYTDAVIHEIQR.[F]"	"M3(Oxidation)"	"1"	"3"	"P33272"	"Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1"	"Q64583; P33272; P04167"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"1"	"3"	"3"	"0.2045"	"0.0000"	"1"	"1"	"1"	"606.65143"	"1817.93973"	"1817.92144"	"10.06"	"0.00610"	"11/160"	"11"	"160"	"1316882.55529785"	"HCD"	"MS2"	"6.364693"	"19.9"	"100.000"	"69.4365"	"23213"	"23213"	"23192"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.1"	""	"26.9"	""	"24.7"	""	"38.3"	""	"40.0"	"36.5"	"NoQuanLabels"	"1113"	"44"	"37.000"	"30.000"	"0.00213533082116453"	""	"0"	"0.0006517"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKMPYTDAVIHEIQR"	"[R].TKmPYTDAVIHEIQR.[F]"	"M3(Oxidation)"	"1"	"3"	"P33272"	"Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1"	"Q64583; P33272; P04167"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"1"	"3"	"3"	"0.1944"	"0.0000"	"1"	"1"	"1"	"606.65155"	"1817.94010"	"1817.92144"	"10.26"	"0.00622"	"10/160"	"10"	"160"	"1118941.72314453"	"HCD"	"MS2"	"1.936031"	"17.7"	"100.000"	"69.7662"	"23347"	"23347"	"23326"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.6"	""	"16.2"	""	"17.7"	""	"37.8"	""	"39.4"	"36.0"	"NoQuanLabels"	"1108"	"36"	"37.000"	"30.000"	"0.0149111028137551"	""	"0"	"0.002252"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKMPYTDAVIHEIQR"	"[R].TKmPYTDAVIHEIQR.[F]"	"M3(Oxidation)"	"1"	"3"	"P33272"	"Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1"	"Q64583; P33272; P04167"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"1"	"3"	"3"	"0.1837"	"0.0000"	"1"	"1"	"1"	"606.65173"	"1817.94065"	"1817.92144"	"10.56"	"0.00640"	"14/160"	"14"	"160"	"1407050.24188232"	"HCD"	"MS2"	"4.011566"	"19.1"	"100.000"	"69.6157"	"23272"	"23272"	"23251"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.8"	""	"20.0"	""	"22.4"	""	"35.1"	""	"37.3"	"43.6"	"NoQuanLabels"	"1117"	"49"	"37.000"	"30.000"	"0.000749934230795497"	""	"0"	"0.0005771"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAQQELEEQTR"	"[K].kAQQELEEQTR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"606.67511"	"1818.01078"	"1818.01215"	"-0.75"	"-0.00046"	"9/110"	"9"	"110"	"3929270.32427979"	"HCD"	"MS2"	"16.59868"	"162.8"	"100.000"	"32.5519"	"8250"	"8250"	"8227"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"197.5"	""	"161.1"	""	"168.4"	""	"310.8"	"0.5"	"360.0"	"349.9"	""	"1178"	"12"	"37.000"	"30.000"	"4.14109596411578"	"13"	"0.0008629"	"0.01095"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAQQELEEQTR"	"[K].kAQQELEEQTR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"606.67517"	"1818.01096"	"1818.01215"	"-0.65"	"-0.00040"	"10/110"	"10"	"110"	"3754156.53894043"	"HCD"	"MS2"	"56.93451"	"144.0"	"100.000"	"32.5730"	"8252"	"8252"	"8227"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"184.5"	""	"131.6"	""	"145.5"	""	"274.5"	"1.0"	"324.5"	"307.3"	""	"1177"	"25"	"37.000"	"30.000"	"0.181445610872175"	"14"	"0"	"0.000273"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVQELPLESDGALR"	"[R].yVQELPLESDGALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"606.99750"	"1818.97794"	"1818.97989"	"-1.07"	"-0.00065"	"12/138"	"12"	"138"	"440824.331481934"	"HCD"	"MS2"	"14.6234"	"5.8"	"100.000"	"93.5727"	"32780"	"32780"	"32772"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.8"	""	"5.4"	""	"6.8"	""	"12.6"	""	"13.2"	"10.5"	""	"1192"	"48"	"37.000"	"30.000"	"0.000855551702278779"	"19"	"0"	"0.0001015"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVQELPLESDGALR"	"[R].yVQELPLESDGALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"606.99786"	"1818.97904"	"1818.97989"	"-0.47"	"-0.00029"	"10/138"	"10"	"138"	"906187.518554688"	"HCD"	"MS2"	"24.48103"	"9.0"	"100.000"	"93.2953"	"32679"	"32679"	"32672"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.6"	""	"12.3"	""	"13.5"	""	"13.4"	""	"11.0"	"21.2"	""	"1193"	"37"	"37.000"	"30.000"	"0.0108295509284418"	"17"	"0"	"3.655E-05"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVQELPLESDGALR"	"[R].yVQELPLESDGALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"909.99329"	"1818.97930"	"1818.97989"	"-0.33"	"-0.00030"	"10/138"	"10"	"138"	"210225.161132813"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"93.4318"	"32729"	"32729"	"32724"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.7"	""	"12.4"	""	"12.1"	""	"13.4"	""	"15.1"	"11.7"	""	"1198"	"40"	"37.000"	"30.000"	"0.00537559847905949"	"21"	"0"	"0.0005982"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVQELPLESDGALR"	"[R].yVQELPLESDGALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"606.99799"	"1818.97940"	"1818.97989"	"-0.27"	"-0.00016"	"12/138"	"12"	"138"	"675724.389953613"	"HCD"	"MS2"	"6.19266"	"7.2"	"100.000"	"93.2685"	"32683"	"32683"	"32678"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.7"	""	"8.7"	""	"9.2"	""	"10.9"	""	"14.0"	"16.4"	""	"1198"	"39"	"37.000"	"30.000"	"0.0071027548015213"	"15"	"0"	"0.0002154"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVQELPLESDGALR"	"[R].yVQELPLESDGALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.7885"	"0.0000"	"1"	"1"	"1"	"909.99341"	"1818.97954"	"1818.97989"	"-0.19"	"-0.00018"	"9/138"	"9"	"138"	"237624.461730957"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"93.4328"	"32746"	"32746"	"32734"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.7"	""	"16.1"	""	"14.0"	""	"19.8"	""	"18.2"	"14.0"	""	"1197"	"52"	"37.000"	"30.000"	"0.000391799750179263"	"26"	"0"	"0.0001375"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVQELPLESDGALR"	"[R].yVQELPLESDGALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"606.99823"	"1818.98014"	"1818.97989"	"0.13"	"0.00008"	"11/138"	"11"	"138"	"564568.171447754"	"HCD"	"MS2"	"14.65164"	"6.1"	"100.000"	"93.5304"	"32782"	"32782"	"32776"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.3"	""	"5.4"	""	"7.8"	""	"11.6"	""	"12.1"	"12.2"	""	"1194"	"42"	"37.000"	"30.000"	"0.00413975206191891"	"18"	"0"	"3.328E-05"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVQELPLESDGALR"	"[R].yVQELPLESDGALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"909.99414"	"1818.98100"	"1818.97989"	"0.61"	"0.00056"	"5/138"	"5"	"138"	"111337.045776367"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"93.1531"	"32640"	"32640"	"32623"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.0"	""	"9.0"	""	"6.9"	""	"10.7"	""	"11.5"	"10.3"	""	"1183"	"13"	"37.000"	"30.000"	"3.15467590680928"	"17"	"0.0003538"	"0.006168"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDIAENEMPGLMR"	"[K].aLDIAENEmPGLmR.[M]"	"N-Term(TMT6plex); M9(Oxidation); M13(Oxidation)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"607.64020"	"1820.90604"	"1820.90839"	"-1.29"	"-0.00078"	"7/128"	"7"	"128"	"857880.391662598"	"HCD"	"MS2"	"13.13628"	"10.1"	"100.000"	"72.3835"	"24400"	"24400"	"24378"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.4"	""	"6.7"	""	"13.2"	""	"23.9"	""	"21.3"	"19.4"	""	"900"	"48"	"36.000"	"29.000"	"0.000723123563855794"	"21"	"0"	"3.221E-05"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDIAENEMPGLMR"	"[K].aLDIAENEmPGLmR.[M]"	"N-Term(TMT6plex); M9(Oxidation); M13(Oxidation)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.9535"	"0.0000"	"1"	"1"	"1"	"607.64038"	"1820.90659"	"1820.90839"	"-0.99"	"-0.00060"	"13/128"	"13"	"128"	"690529.76965332"	"HCD"	"MS2"	"11.52883"	"9.5"	"100.000"	"72.2250"	"24349"	"24349"	"24325"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.5"	""	"13.4"	""	"9.6"	""	"22.2"	""	"14.2"	"18.4"	""	"901"	"43"	"36.000"	"29.000"	"0.00203092925395928"	"17"	"0"	"0.001024"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDIAENEMPGLMR"	"[K].aLDIAENEmPGLmR.[M]"	"N-Term(TMT6plex); M9(Oxidation); M13(Oxidation)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"910.95715"	"1820.90703"	"1820.90839"	"-0.74"	"-0.00068"	"9/128"	"9"	"128"	"142168.854370117"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"72.3472"	"24399"	"24399"	"24373"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.3"	""	"4.0"	""	"6.3"	""	"16.5"	""	"11.2"	"9.2"	""	"904"	"38"	"36.000"	"29.000"	"0.00767606130912708"	"16"	"0"	"0.0002457"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDIAENEMPGLMR"	"[K].aLDIAENEmPGLmR.[M]"	"N-Term(TMT6plex); M9(Oxidation); M13(Oxidation)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"910.95721"	"1820.90715"	"1820.90839"	"-0.68"	"-0.00062"	"8/128"	"8"	"128"	"134363.862670898"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"72.4411"	"24424"	"24424"	"24393"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.7"	""	"4.6"	""	"2.7"	""	"15.3"	""	"8.2"	"5.5"	""	"905"	"43"	"36.000"	"29.000"	"0.00220099260575386"	"15"	"0"	"0.0001462"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDIAENEMPGLMR"	"[K].aLDIAENEmPGLmR.[M]"	"N-Term(TMT6plex); M9(Oxidation); M13(Oxidation)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.9250"	"0.0000"	"1"	"1"	"1"	"607.64075"	"1820.90769"	"1820.90839"	"-0.38"	"-0.00023"	"14/128"	"14"	"128"	"1332267.03063965"	"HCD"	"MS2"	"5.329835"	"14.6"	"100.000"	"72.5227"	"24470"	"24470"	"24452"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.1"	""	"13.9"	""	"18.3"	""	"42.8"	""	"23.0"	"24.0"	""	"924"	"40"	"36.000"	"29.000"	"0.00424269659575415"	"18"	"0"	"0.0001667"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDIAENEMPGLMR"	"[K].aLDIAENEmPGLmR.[M]"	"N-Term(TMT6plex); M9(Oxidation); M13(Oxidation)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"607.64111"	"1820.90879"	"1820.90839"	"0.22"	"0.00013"	"7/128"	"7"	"128"	"1106294.71136475"	"HCD"	"MS2"	"8.587766"	"12.4"	"100.000"	"72.6739"	"24518"	"24518"	"24499"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.8"	""	"12.3"	""	"16.0"	""	"34.1"	""	"22.2"	"18.3"	""	"922"	"45"	"36.000"	"29.000"	"0.00151251930125148"	"20"	"0"	"1.081E-05"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHGHSMSDPGVSYR"	"[R].yHGHSMSDPGVSYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"607.95551"	"1821.85196"	"1821.85398"	"-1.11"	"-0.00067"	"12/118"	"12"	"118"	"938101.04901123"	"HCD"	"MS2"	"22.55359"	"23.2"	"100.000"	"31.0013"	"7621"	"7621"	"7606"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.8"	""	"30.4"	""	"31.1"	""	"33.4"	""	"54.8"	"43.2"	""	"485"	"31"	"33.000"	"26.000"	"0.018523017751759"	"14"	"0"	"3.261E-05"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHGHSMSDPGVSYR"	"[R].yHGHSMSDPGVSYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"607.95654"	"1821.85508"	"1821.85398"	"0.60"	"0.00036"	"12/118"	"12"	"118"	"823665.321289063"	"HCD"	"MS2"	"0"	"23.6"	"100.000"	"31.0177"	"7617"	"7617"	"7590"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.9"	""	"33.2"	""	"30.2"	""	"36.1"	""	"46.1"	"47.2"	""	"528"	"24"	"34.000"	"27.000"	"0.11056150119113"	"14"	"0"	"0.0001458"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYNGAAPTEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.9792"	"0.0000"	"1"	"1"	"1"	"911.49017"	"1821.97307"	"1821.97470"	"-0.89"	"-0.00081"	"8/138"	"8"	"138"	"163673.599914551"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"57.4248"	"18349"	"18349"	"18323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.8"	""	"19.0"	""	"16.5"	""	"20.6"	""	"19.9"	"23.5"	""	"1153"	"48"	"37.000"	"30.000"	"0.00082375736708165"	"16"	"0"	"0.0003528"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYNGAAPTEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"911.49054"	"1821.97380"	"1821.97470"	"-0.49"	"-0.00045"	"9/138"	"9"	"138"	"234767.319213867"	"HCD"	"MS2"	"0"	"19.6"	"100.000"	"57.7289"	"18472"	"18472"	"18454"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.5"	""	"25.4"	""	"30.3"	""	"24.9"	""	"40.0"	"38.4"	""	"1154"	"37"	"37.000"	"30.000"	"0.0119998498845883"	"21"	"0"	"0.0001025"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYNGAAPTEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"911.49066"	"1821.97405"	"1821.97470"	"-0.36"	"-0.00033"	"8/138"	"8"	"138"	"117123.443054199"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"57.5932"	"18432"	"18432"	"18408"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.2"	""	"14.5"	""	"13.5"	""	"14.5"	""	"18.4"	"25.9"	""	"1151"	"24"	"37.000"	"30.000"	"0.25006063401074"	"15"	"0.005119"	"0.05817"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYNGAAPTEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.9831"	"0.0000"	"1"	"1"	"1"	"911.49103"	"1821.97478"	"1821.97470"	"0.04"	"0.00004"	"18/138"	"18"	"138"	"394160.44519043"	"HCD"	"MS2"	"0"	"30.1"	"100.000"	"57.2893"	"18308"	"18308"	"18281"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"52.3"	""	"32.0"	""	"47.7"	""	"48.8"	""	"48.0"	"58.1"	""	"1153"	"59"	"37.000"	"30.000"	"7.14166232134757E-05"	"17"	"0"	"5.782E-06"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYNGAAPTEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"607.99646"	"1821.97483"	"1821.97470"	"0.07"	"0.00004"	"13/138"	"13"	"138"	"4464849.03735352"	"HCD"	"MS2"	"4.056166"	"95.5"	"100.000"	"57.5077"	"18382"	"18382"	"18367"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"153.0"	"2.5"	"131.4"	""	"132.2"	""	"145.5"	"3.5"	"164.8"	"170.7"	""	"1153"	"52"	"37.000"	"30.000"	"0.000325686165979293"	"18"	"0"	"3.245E-06"	"1.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYNGAAPTEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.9123"	"0.0000"	"1"	"1"	"1"	"607.99646"	"1821.97483"	"1821.97470"	"0.07"	"0.00004"	"13/138"	"13"	"138"	"4993925.00164795"	"HCD"	"MS2"	"4.095997"	"102.1"	"100.000"	"57.3468"	"18331"	"18331"	"18313"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"172.3"	""	"136.8"	"1.5"	"134.5"	""	"157.1"	"2.9"	"182.3"	"178.8"	""	"1153"	"57"	"37.000"	"30.000"	"0.000127584910008765"	"21"	"0"	"7.137E-07"	"1.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPYEGQEVMVR"	"[R].gTLDPYEGQEVMVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"911.96356"	"1822.91985"	"1822.92066"	"-0.45"	"-0.00041"	"8/130"	"8"	"130"	"76049.0123901367"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"77.5397"	"26488"	"26488"	"26461"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.0"	""	"6.3"	""	"6.5"	""	"4.9"	""	"7.4"	"8.8"	""	"963"	"20"	"36.000"	"29.000"	"0.503032785554815"	"17"	"0"	"0.003354"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPYEGQEVMVR"	"[R].gTLDPYEGQEVMVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"911.96387"	"1822.92046"	"1822.92066"	"-0.11"	"-0.00010"	"5/130"	"5"	"130"	"79389.3706665039"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"77.4529"	"26463"	"26463"	"26439"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.0"	""	"6.7"	""	"7.9"	""	"5.1"	""	"10.9"	"8.1"	""	"962"	"16"	"36.000"	"29.000"	"1.21379425156316"	"18"	"0.0002479"	"0.005122"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPYEGQEVMVR"	"[R].gTLDPYEGQEVMVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"911.96387"	"1822.92046"	"1822.92066"	"-0.11"	"-0.00010"	"5/130"	"5"	"130"	"115980.827758789"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"77.1276"	"26331"	"26331"	"26301"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.8"	""	"11.9"	""	"10.1"	""	"9.9"	""	"15.4"	"11.2"	""	"962"	"16"	"36.000"	"29.000"	"1.21379425156316"	"17"	"0.0003538"	"0.006739"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPYEGQEVMVR"	"[R].gTLDPYEGQEVMVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"911.96423"	"1822.92119"	"1822.92066"	"0.29"	"0.00026"	"8/130"	"8"	"130"	"142126.628173828"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"77.2098"	"26354"	"26354"	"26329"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.1"	""	"9.3"	""	"14.4"	""	"10.7"	""	"14.9"	"11.9"	""	"967"	"42"	"36.000"	"29.000"	"0.003383736050671"	"19"	"0"	"0.001782"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.3654"	"0.0000"	"1"	"1"	"1"	"911.97943"	"1822.95159"	"1822.95871"	"-3.91"	"-0.00356"	"13/138"	"13"	"138"	"375974.706420898"	"HCD"	"MS2"	"100"	"30.2"	"100.000"	"61.7654"	"20100"	"20100"	"20081"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.8"	""	"37.6"	""	"39.7"	""	"56.1"	""	"58.1"	"57.5"	""	"1067"	"52"	"37.000"	"30.000"	"0.000366551012747593"	"24"	"0"	"6.964E-06"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.2656"	"0.0000"	"1"	"1"	"1"	"608.32312"	"1822.95481"	"1822.95871"	"-2.14"	"-0.00130"	"14/138"	"14"	"138"	"2383742.93438721"	"HCD"	"MS2"	"0"	"58.2"	"100.000"	"61.8478"	"20118"	"20118"	"20097"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"81.9"	""	"73.1"	""	"77.2"	""	"88.1"	"0.9"	"111.5"	"119.4"	""	"1062"	"64"	"37.000"	"30.000"	"2.24954414972307E-05"	"19"	"0"	"3.391E-06"	"1.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.3269"	"0.0000"	"1"	"1"	"1"	"608.32391"	"1822.95719"	"1822.95871"	"-0.84"	"-0.00051"	"13/138"	"13"	"138"	"1599676.18804932"	"HCD"	"MS2"	"0"	"41.9"	"100.000"	"62.1389"	"20234"	"20234"	"20220"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.4"	""	"54.5"	""	"58.0"	""	"61.5"	"1.7"	"72.7"	"82.9"	""	"1068"	"52"	"37.000"	"30.000"	"0.00035689565198164"	"20"	"0"	"5.669E-06"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.6341"	"0.0000"	"1"	"1"	"1"	"911.98236"	"1822.95745"	"1822.95871"	"-0.70"	"-0.00063"	"12/138"	"12"	"138"	"127549.949829102"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"58.4429"	"18764"	"18764"	"18735"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.8"	""	"11.6"	""	"12.4"	""	"12.2"	""	"12.1"	"16.6"	""	"1068"	"41"	"37.000"	"30.000"	"0.00381541038124324"	"16"	"0"	"0.0001785"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.3250"	"0.0000"	"1"	"1"	"1"	"911.98236"	"1822.95745"	"1822.95871"	"-0.70"	"-0.00063"	"16/138"	"16"	"138"	"350983.478637695"	"HCD"	"MS2"	"100"	"31.2"	"100.000"	"61.8914"	"20136"	"20136"	"20113"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"48.5"	""	"35.7"	""	"46.5"	""	"49.8"	""	"58.6"	"58.3"	""	"1068"	"40"	"37.000"	"30.000"	"0.00582829139663636"	"17"	"0"	"1.653E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.3559"	"0.0000"	"1"	"1"	"1"	"608.32410"	"1822.95774"	"1822.95871"	"-0.54"	"-0.00033"	"14/138"	"14"	"138"	"2287683.73046875"	"HCD"	"MS2"	"0"	"59.2"	"100.000"	"61.7104"	"20078"	"20078"	"20049"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"91.7"	""	"72.4"	""	"79.0"	""	"99.0"	"0.0"	"104.5"	"114.5"	""	"1070"	"59"	"37.000"	"30.000"	"6.40256184249376E-05"	"17"	"0"	"5.16E-07"	"1.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"911.98267"	"1822.95806"	"1822.95871"	"-0.36"	"-0.00033"	"15/138"	"15"	"138"	"393210.677001953"	"HCD"	"MS2"	"0"	"30.4"	"100.000"	"58.6253"	"18853"	"18853"	"18831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.8"	""	"39.9"	""	"39.0"	""	"51.3"	""	"53.7"	"51.9"	""	"1069"	"65"	"37.000"	"30.000"	"1.74561196296114E-05"	"29"	"0"	"7.342E-06"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"911.98303"	"1822.95879"	"1822.95871"	"0.04"	"0.00004"	"14/138"	"14"	"138"	"290931.435913086"	"HCD"	"MS2"	"0"	"23.2"	"100.000"	"58.3259"	"18731"	"18731"	"18703"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.3"	""	"37.1"	""	"30.4"	""	"35.3"	"1.8"	"38.9"	"40.0"	""	"1076"	"54"	"37.000"	"30.000"	"0.000206434498074846"	"19"	"0"	"4.388E-05"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.2264"	"0.0000"	"1"	"1"	"1"	"608.32446"	"1822.95884"	"1822.95871"	"0.07"	"0.00004"	"13/138"	"13"	"138"	"3787518.26300049"	"HCD"	"MS2"	"2.779949"	"87.3"	"100.000"	"58.7928"	"18906"	"18906"	"18888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"143.3"	""	"104.8"	""	"137.0"	""	"132.3"	"1.6"	"156.9"	"149.9"	""	"1072"	"53"	"37.000"	"30.000"	"0.000287849042854455"	"23"	"0"	"1.15E-06"	"1.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.2969"	"0.0000"	"1"	"1"	"1"	"608.32446"	"1822.95884"	"1822.95871"	"0.07"	"0.00004"	"14/138"	"14"	"138"	"4014112.36706543"	"HCD"	"MS2"	"2.622408"	"90.0"	"100.000"	"58.5400"	"18818"	"18818"	"18799"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"155.3"	""	"113.6"	""	"126.3"	""	"143.4"	"1.9"	"155.8"	"154.9"	""	"1072"	"64"	"37.000"	"30.000"	"1.99142882796085E-05"	"24"	"0"	"5.195E-07"	"1.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.0357"	"0.0000"	"1"	"1"	"1"	"608.32471"	"1822.95957"	"1822.95871"	"0.47"	"0.00028"	"13/138"	"13"	"138"	"1020014.39135742"	"HCD"	"MS2"	"29.10735"	"47.1"	"100.000"	"59.7183"	"19285"	"19285"	"19254"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"64.5"	""	"57.9"	""	"63.1"	""	"82.2"	"2.6"	"94.8"	"81.8"	""	"1082"	"28"	"37.000"	"30.000"	"0.0922990572450689"	"23"	"0"	"3.193E-05"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dInAYNGAAPTEk.[L]"	"N-Term(TMT6plex); N3(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	""	"0.0357"	"2"	"2"	"2"	"608.32471"	"1822.95957"	"1822.95871"	"0.47"	"0.00028"	"13/138"	"13"	"138"	"1020014.39135742"	"HCD"	"MS2"	"29.10735"	"47.1"	"100.000"	"59.7183"	"19285"	"19285"	"19254"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"64.5"	""	"57.9"	""	"63.1"	""	"82.2"	"2.6"	"94.8"	"81.8"	""	"1082"	"27"	"37.000"	"30.000"	"0.114076782911391"	"23"	"0"	"0.0001816"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"911.98364"	"1822.96001"	"1822.95871"	"0.71"	"0.00065"	"9/138"	"9"	"138"	"600381.140258789"	"HCD"	"MS2"	"0"	"47.8"	"100.000"	"58.8022"	"18910"	"18910"	"18888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"85.8"	""	"67.8"	""	"65.3"	""	"67.4"	""	"83.6"	"85.6"	""	"1079"	"58"	"37.000"	"30.000"	"9.1620245050311E-05"	"19"	"0"	"4.656E-06"	"0.975"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLHDDYFYHDEL"	"[R].qLHDDYFYHDEL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62703"	"Reticulocalbin-2 OS=Rattus norvegicus OX=10116 GN=Rcn2 PE=1 SV=2"	"Q62703"	"Reticulocalbin-2 OS=Rattus norvegicus OX=10116 GN=Rcn2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"608.61902"	"1823.84250"	"1823.84379"	"-0.71"	"-0.00043"	"5/102"	"5"	"102"	"1008433.08856201"	"HCD"	"MS2"	"28.77408"	"12.5"	"100.000"	"75.8263"	"25803"	"25803"	"25777"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.9"	""	"17.1"	""	"22.3"	""	"20.2"	""	"17.8"	"20.0"	""	"476"	"18"	"33.000"	"26.000"	"0.379819237042343"	"14"	"0"	"0.0004161"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLHDDYFYHDEL"	"[R].qLHDDYFYHDEL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62703"	"Reticulocalbin-2 OS=Rattus norvegicus OX=10116 GN=Rcn2 PE=1 SV=2"	"Q62703"	"Reticulocalbin-2 OS=Rattus norvegicus OX=10116 GN=Rcn2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"608.62048"	"1823.84690"	"1823.84379"	"1.70"	"0.00103"	"6/102"	"6"	"102"	"1280322.80773926"	"HCD"	"MS2"	"22.12718"	"19.8"	"100.000"	"75.9472"	"25842"	"25842"	"25823"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.2"	""	"25.7"	""	"27.9"	""	"37.7"	""	"36.0"	"34.1"	""	"509"	"6"	"34.000"	"27.000"	"7.13982860858711"	"13"	"0"	"0.002984"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dInAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"912.48169"	"1823.95610"	"1823.94273"	"7.33"	"0.00669"	"15/138"	"15"	"138"	"370304.046447754"	"HCD"	"MS2"	"0"	"31.0"	"100.000"	"61.9143"	"20159"	"20159"	"20146"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.6"	""	"33.1"	""	"40.2"	""	"41.6"	""	"69.4"	"62.8"	""	"1054"	"30"	"37.000"	"30.000"	"0.0554383907504838"	"19"	"0.008522"	"0.1057"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDAQDLYEAGEK"	"[R].qDAQDLYEAGEk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"912.97113"	"1824.93498"	"1824.93798"	"-1.64"	"-0.00150"	"10/128"	"10"	"128"	"163972.74407959"	"HCD"	"MS2"	"100"	"15.1"	"100.000"	"60.9042"	"19733"	"19733"	"19702"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.1"	""	"20.5"	""	"19.2"	""	"29.5"	""	"30.6"	"21.7"	""	"950"	"20"	"36.000"	"29.000"	"0.493962078768803"	"16"	"0"	"0.001547"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDAQDLYEAGEK"	"[R].qDAQDLYEAGEk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"608.98328"	"1824.93528"	"1824.93798"	"-1.48"	"-0.00090"	"13/128"	"13"	"128"	"1288898.43280029"	"HCD"	"MS2"	"70.59922"	"58.2"	"100.000"	"60.7870"	"19685"	"19685"	"19670"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"70.3"	""	"68.6"	""	"76.3"	""	"97.9"	"1.1"	"122.4"	"116.3"	""	"954"	"10"	"36.000"	"29.000"	"4.77"	"15"	"0.000936"	"0.01183"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDAQDLYEAGEK"	"[R].qDAQDLYEAGEk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"912.97247"	"1824.93767"	"1824.93798"	"-0.17"	"-0.00015"	"13/128"	"13"	"128"	"175323.015258789"	"HCD"	"MS2"	"0"	"14.7"	"100.000"	"60.7921"	"19703"	"19703"	"19673"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.7"	""	"14.6"	""	"18.8"	""	"21.4"	""	"29.7"	"26.8"	""	"976"	"51"	"36.000"	"29.000"	"0.00035515654461397"	""	"0"	"0.0005277"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDAQDLYEAGEK"	"[R].qDAQDLYEAGEk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"608.98419"	"1824.93802"	"1824.93798"	"0.02"	"0.00001"	"12/128"	"12"	"128"	"2114049.7890625"	"HCD"	"MS2"	"30.68201"	"69.6"	"100.000"	"61.1141"	"19818"	"19818"	"19798"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.2"	""	"81.0"	""	"93.7"	""	"114.4"	""	"126.9"	"141.7"	""	"981"	"26"	"36.000"	"29.000"	"0.11793399534034"	"22"	"0"	"0.003498"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDAQDLYEAGEK"	"[R].qDAQDLYEAGEk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.5769"	"0.0000"	"1"	"1"	"1"	"608.98438"	"1824.93857"	"1824.93798"	"0.32"	"0.00020"	"13/128"	"13"	"128"	"2215903.03631592"	"HCD"	"MS2"	"23.71361"	"73.4"	"100.000"	"60.7761"	"19696"	"19696"	"19673"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"110.1"	""	"83.2"	""	"102.0"	""	"118.6"	""	"146.5"	"140.7"	""	"978"	"26"	"36.000"	"29.000"	"0.121145938618268"	"25"	"0"	"0.000928"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTEDELGHPEK"	"[K].vLTEDELGHPEk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"609.00763"	"1825.00833"	"1825.01075"	"-1.32"	"-0.00080"	"10/104"	"10"	"104"	"730878.403991699"	"HCD"	"MS2"	"10.04901"	"29.0"	"100.000"	"61.5399"	"19992"	"19992"	"19969"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.1"	""	"30.2"	""	"36.2"	""	"50.6"	"1.5"	"58.4"	"55.4"	""	"1023"	"23"	"37.000"	"30.000"	"0.287637587834863"	"18"	"0"	"0.003388"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGHPITDELLEK"	"[K].dGHPITDELLEk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"0"	"3"	"3"	"0.1154"	"0.0000"	"1"	"1"	"1"	"609.00769"	"1825.00852"	"1825.01075"	"-1.22"	"-0.00074"	"6/108"	"6"	"108"	"410016.608947754"	"HCD"	"MS2"	"6.22607"	"14.6"	"100.000"	"75.7997"	"25782"	"25782"	"25762"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.9"	""	"14.4"	""	"19.6"	""	"28.9"	""	"25.8"	"28.6"	""	"1022"	"26"	"37.000"	"30.000"	"0.121736524884229"	""	"0.0008629"	"0.01035"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTEDELGHPEK"	"[K].vLTEDELGHPEk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"609.00781"	"1825.00888"	"1825.01075"	"-1.02"	"-0.00062"	"13/104"	"13"	"104"	"2137314.93920898"	"HCD"	"MS2"	"48.30237"	"71.2"	"100.000"	"61.0385"	"19803"	"19803"	"19779"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"108.6"	""	"87.5"	""	"90.6"	""	"130.5"	""	"124.1"	"138.5"	""	"1022"	"54"	"37.000"	"30.000"	"0.000190730830633613"	"24"	"0"	"4.648E-06"	"0.975"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTEDELGHPEK"	"[K].vLTEDELGHPEk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"0"	"3"	"3"	"0.8367"	"0.0000"	"1"	"1"	"1"	"609.00800"	"1825.00943"	"1825.01075"	"-0.72"	"-0.00044"	"8/104"	"8"	"104"	"2188105.80932617"	"HCD"	"MS2"	"48.4256"	"70.7"	"100.000"	"61.1898"	"19849"	"19849"	"19829"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"100.2"	""	"85.6"	""	"97.6"	""	"117.5"	""	"136.6"	"133.7"	""	"1013"	"49"	"37.000"	"30.000"	"0.000593716952650128"	"23"	"0"	"3.806E-06"	"0.994"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISEFQHEEFYR"	"[K].dISEFQHEEFYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"610.29462"	"1828.86930"	"1828.87034"	"-0.57"	"-0.00035"	"9/116"	"9"	"116"	"659396.820922852"	"HCD"	"MS2"	"52.81474"	"15.3"	"100.000"	"74.5257"	"25271"	"25271"	"25248"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.6"	""	"16.2"	""	"18.5"	""	"25.0"	""	"29.4"	"34.0"	""	"650"	"12"	"35.000"	"28.000"	"2.07913821531861"	"15"	"0"	"0.003247"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISEFQHEEFYR"	"[K].dISEFQHEEFYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.29474"	"1828.86966"	"1828.87034"	"-0.37"	"-0.00023"	"11/116"	"11"	"116"	"673345.839050293"	"HCD"	"MS2"	"49.92788"	"14.2"	"100.000"	"74.3469"	"25212"	"25212"	"25185"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.5"	""	"17.8"	""	"18.9"	""	"19.7"	""	"30.6"	"28.6"	""	"653"	"15"	"35.000"	"28.000"	"0.950349139048746"	"13"	"0.0006732"	"0.008749"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEQLGPVAEETR"	"[K].eLEEQLGPVAEETR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"610.31995"	"1828.94529"	"1828.94899"	"-2.02"	"-0.00123"	"13/146"	"13"	"146"	"761361.065124512"	"HCD"	"MS2"	"42.02259"	"16.7"	"100.000"	"74.2271"	"25163"	"25163"	"25137"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.3"	""	"18.1"	""	"23.9"	""	"28.1"	"1.1"	"30.1"	"33.8"	""	"1017"	"34"	"37.000"	"30.000"	"0.0188057629418265"	"22"	"0"	"6.619E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEQLGPVAEETR"	"[K].eLEEQLGPVAEETR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"610.32001"	"1828.94547"	"1828.94899"	"-1.92"	"-0.00117"	"16/146"	"16"	"146"	"579822.675048828"	"HCD"	"MS2"	"27.32345"	"13.4"	"100.000"	"74.2697"	"25167"	"25167"	"25142"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.0"	""	"16.0"	""	"17.4"	""	"23.6"	""	"24.2"	"26.5"	""	"1017"	"34"	"37.000"	"30.000"	"0.0194218661722164"	"25"	"0"	"3.755E-05"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEQLGPVAEETR"	"[K].eLEEQLGPVAEETR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"1"	"914.97717"	"1828.94707"	"1828.94899"	"-1.05"	"-0.00096"	"6/146"	"6"	"146"	"97908.9788208008"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"74.1185"	"25119"	"25119"	"25089"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.9"	""	"4.6"	""	"5.7"	""	"12.7"	""	"12.8"	"7.6"	""	"1032"	"45"	"37.000"	"30.000"	"0.00166974326975688"	""	"0"	"0.0006036"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEQLGPVAEETR"	"[K].eLEEQLGPVAEETR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.0833"	"0.0000"	"1"	"1"	"1"	"914.97760"	"1828.94792"	"1828.94899"	"-0.58"	"-0.00053"	"4/146"	"4"	"146"	"87944.4144287109"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"74.2028"	"25140"	"25140"	"25112"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.7"	""	"8.4"	""	"4.7"	""	"10.0"	""	"13.5"	"12.3"	""	"1038"	"12"	"37.000"	"30.000"	"3.66578810662477"	"14"	"0.001211"	"0.01542"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQEVEVPEDFGPVR"	"[K].vQEVEVPEDFGPVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"914.98419"	"1828.96111"	"1828.96424"	"-1.72"	"-0.00157"	"8/140"	"8"	"140"	"98665.4769287109"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"91.1267"	"31861"	"31861"	"31841"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.5"	""	"5.1"	""	"4.7"	""	"3.3"	""	"4.9"	"8.2"	""	"1055"	"24"	"37.000"	"30.000"	"0.201940052099624"	"15"	"0"	"0.002095"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQEVEVPEDFGPVR"	"[K].vQEVEVPEDFGPVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"3"	"3"	"0.9512"	"0.0000"	"1"	"1"	"1"	"610.32574"	"1828.96268"	"1828.96424"	"-0.85"	"-0.00052"	"13/140"	"13"	"140"	"960252.340820313"	"HCD"	"MS2"	"23.60192"	"6.6"	"100.000"	"91.1987"	"31890"	"31890"	"31873"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.6"	""	"10.6"	""	"9.9"	""	"6.6"	""	"10.8"	"15.1"	""	"1060"	"41"	"37.000"	"30.000"	"0.00378683052820022"	"17"	"0"	"7.45E-05"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQEVEVPEDFGPVR"	"[K].vQEVEVPEDFGPVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.32581"	"1828.96286"	"1828.96424"	"-0.75"	"-0.00046"	"11/140"	"11"	"140"	"600609.883117676"	"HCD"	"MS2"	"25.06086"	"7.3"	"100.000"	"91.4825"	"31995"	"31995"	"31985"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.3"	""	"8.2"	""	"9.5"	""	"14.2"	""	"11.8"	"13.5"	""	"1054"	"20"	"37.000"	"30.000"	"0.477321080673351"	"14"	"0"	"0.0005014"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQEVEVPEDFGPVR"	"[K].vQEVEVPEDFGPVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"3"	"3"	"0.8837"	"0.0000"	"1"	"1"	"1"	"610.32587"	"1828.96305"	"1828.96424"	"-0.65"	"-0.00040"	"13/140"	"13"	"140"	"1080759.152771"	"HCD"	"MS2"	"17.80944"	"6.7"	"100.000"	"91.1700"	"31874"	"31874"	"31860"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.6"	""	"14.1"	""	"10.0"	""	"10.5"	""	"10.2"	"11.1"	""	"1053"	"43"	"37.000"	"30.000"	"0.00269400486411972"	"20"	"0"	"2.932E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQEVEVPEDFGPVR"	"[K].vQEVEVPEDFGPVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"914.98553"	"1828.96379"	"1828.96424"	"-0.25"	"-0.00023"	"14/140"	"14"	"140"	"214231.45300293"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"91.3921"	"31961"	"31961"	"31955"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.4"	""	"13.7"	""	"17.6"	""	"9.9"	""	"13.1"	"13.9"	""	"1053"	"44"	"37.000"	"30.000"	"0.00232486840531519"	"15"	"0"	"0.0001485"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQEVEVPEDFGPVR"	"[K].vQEVEVPEDFGPVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"914.98560"	"1828.96391"	"1828.96424"	"-0.18"	"-0.00016"	"6/140"	"6"	"140"	"166757.176025391"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"91.3792"	"31950"	"31950"	"31944"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.9"	""	"12.4"	""	"9.3"	""	"7.8"	""	"8.9"	"7.3"	""	"1053"	"31"	"37.000"	"30.000"	"0.0397556057865851"	"15"	"0"	"0.0004412"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQEVEVPEDFGPVR"	"[K].vQEVEVPEDFGPVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"914.98590"	"1828.96453"	"1828.96424"	"0.15"	"0.00014"	"6/140"	"6"	"140"	"137654.621398926"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"91.0959"	"31845"	"31845"	"31826"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.5"	""	"5.9"	""	"15.6"	""	"6.1"	""	"9.4"	"10.2"	""	"1062"	"22"	"37.000"	"30.000"	"0.343632728962498"	"14"	"0"	"0.0007758"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.9219"	"0.0000"	"1"	"1"	"1"	"610.98926"	"1830.95322"	"1830.95474"	"-0.83"	"-0.00051"	"18/158"	"18"	"158"	"9703078.03417969"	"HCD"	"MS2"	"2.717751"	"39.8"	"81.581"	"69.3860"	"23193"	"23193"	"23176"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.3"	""	"61.3"	""	"58.0"	""	"56.2"	"0.6"	"63.1"	"69.6"	""	"1102"	"64"	"37.000"	"30.000"	"2.15849774286389E-05"	"21"	"0"	"3.185E-07"	"1.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"915.98041"	"1830.95354"	"1830.95474"	"-0.66"	"-0.00060"	"6/158"	"6"	"158"	"78336.4688720703"	"HCD"	"MS2"	"0"	"5.4"	"100.000"	"69.7038"	"23322"	"23322"	"23294"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.5"	""	"7.6"	""	"9.6"	""	"8.7"	""	"9.1"	"9.4"	""	"1100"	"11"	"37.000"	"30.000"	"3.94786860199249"	"13"	"0.0006732"	"0.008634"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.9740"	"0.0000"	"1"	"1"	"1"	"610.98938"	"1830.95359"	"1830.95474"	"-0.63"	"-0.00039"	"17/158"	"17"	"158"	"2850764.38146973"	"HCD"	"MS2"	"6.422215"	"20.3"	"100.000"	"69.0933"	"23073"	"23073"	"23054"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.3"	""	"31.6"	""	"27.7"	""	"31.2"	"1.7"	"31.5"	"31.2"	""	"1100"	"77"	"37.000"	"30.000"	"1.2172020902831E-06"	"19"	"0"	"3.241E-07"	"1.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"610.98938"	"1830.95359"	"1830.95474"	"-0.63"	"-0.00039"	"18/158"	"18"	"158"	"6642656.03894043"	"HCD"	"MS2"	"2.001364"	"33.7"	"97.107"	"69.5696"	"23253"	"23253"	"23235"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.0"	""	"46.8"	""	"56.2"	""	"41.5"	""	"53.4"	"56.8"	""	"1100"	"78"	"37.000"	"30.000"	"8.28633886402707E-07"	"20"	"0"	"1.899E-07"	"1.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"915.98053"	"1830.95378"	"1830.95474"	"-0.52"	"-0.00048"	"8/158"	"8"	"158"	"83866.30859375"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"69.8325"	"23360"	"23360"	"23339"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.6"	""	"5.0"	""	"5.9"	""	"6.7"	""	"7.4"	"8.2"	""	"1095"	"20"	"37.000"	"30.000"	"0.590723330420831"	"14"	"0.0001301"	"0.003985"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"915.98053"	"1830.95378"	"1830.95474"	"-0.52"	"-0.00048"	"15/158"	"15"	"158"	"240741.373596191"	"HCD"	"MS2"	"0"	"11.7"	"100.000"	"69.0426"	"23053"	"23053"	"23023"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.8"	""	"17.5"	""	"17.4"	""	"17.9"	""	"20.3"	"17.7"	""	"1095"	"42"	"37.000"	"30.000"	"0.0037015542902711"	"20"	"0"	"1.169E-05"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"915.98065"	"1830.95403"	"1830.95474"	"-0.39"	"-0.00036"	"14/158"	"14"	"158"	"2152912.59191895"	"HCD"	"MS2"	"0"	"85.8"	"100.000"	"69.3513"	"23178"	"23178"	"23161"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"171.3"	""	"130.9"	""	"132.6"	""	"110.7"	"3.1"	"132.3"	"128.3"	""	"1092"	"76"	"37.000"	"30.000"	"1.45610483082873E-06"	"23"	"0"	"1.029E-08"	"1.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"610.98956"	"1830.95414"	"1830.95474"	"-0.33"	"-0.00020"	"11/158"	"11"	"158"	"953726.161682129"	"HCD"	"MS2"	"48.31837"	"27.9"	"100.000"	"69.7293"	"23332"	"23332"	"23310"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.9"	""	"36.1"	""	"41.7"	""	"42.0"	""	"58.3"	"45.6"	""	"1092"	"29"	"37.000"	"30.000"	"0.0674827298660703"	"17"	"0"	"0.0001052"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"915.98071"	"1830.95415"	"1830.95474"	"-0.32"	"-0.00030"	"15/158"	"15"	"158"	"303019.98223877"	"HCD"	"MS2"	"100"	"16.0"	"100.000"	"69.2220"	"23111"	"23111"	"23091"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.1"	""	"22.5"	""	"24.0"	""	"22.9"	""	"27.0"	"29.5"	""	"1091"	"50"	"37.000"	"30.000"	"0.000525768732386876"	"16"	"0"	"3.478E-05"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"610.98969"	"1830.95450"	"1830.95474"	"-0.13"	"-0.00008"	"18/158"	"18"	"158"	"3380497.64428711"	"HCD"	"MS2"	"13.193"	"24.0"	"100.000"	"69.2632"	"23128"	"23128"	"23107"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.9"	""	"37.1"	""	"36.3"	""	"29.1"	""	"44.0"	"44.1"	""	"1111"	"74"	"37.000"	"30.000"	"2.18114261614477E-06"	"19"	"0"	"4.153E-07"	"1.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.8310"	"0.0000"	"1"	"1"	"1"	"915.98102"	"1830.95476"	"1830.95474"	"0.01"	"0.00001"	"12/158"	"12"	"158"	"2075091.394104"	"HCD"	"MS2"	"0"	"81.6"	"100.000"	"69.5260"	"23236"	"23236"	"23219"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"148.0"	""	"130.6"	""	"117.7"	""	"102.9"	"1.1"	"127.2"	"143.9"	""	"1112"	"71"	"37.000"	"30.000"	"4.75417092363883E-06"	"29"	"0"	"1.098E-07"	"1.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"610.99072"	"1830.95761"	"1830.95474"	"1.57"	"0.00096"	"11/158"	"11"	"158"	"869001.162780762"	"HCD"	"MS2"	"50.58927"	"25.3"	"100.000"	"69.8716"	"23376"	"23376"	"23355"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.3"	""	"30.0"	""	"37.9"	""	"42.1"	"0.7"	"50.5"	"43.4"	""	"1076"	"28"	"37.000"	"30.000"	"0.0816173097693124"	"16"	"0"	"0.0001538"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTMDSVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"610.99908"	"1830.98270"	"1830.98327"	"-0.31"	"-0.00019"	"14/128"	"14"	"128"	"436656.014465332"	"HCD"	"MS2"	"33.90487"	"3.9"	"100.000"	"102.6079"	"35792"	"35792"	"35789"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.6"	""	"8.2"	""	"7.1"	""	"2.7"	""	"5.5"	"5.7"	""	"1153"	"54"	"37.000"	"30.000"	"0.000222740562271671"	"20"	"0"	"6.39E-06"	"0.945"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTMDSVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"1"	"1"	"915.99512"	"1830.98296"	"1830.98327"	"-0.17"	"-0.00015"	"3/128"	"3"	"128"	"62349.2329711914"	"HCD"	"MS2"	"0"	"1.8"	"100.000"	"102.3099"	"35772"	"35772"	"35768"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.7"	""	"4.4"	""	"5.2"	""	""	""	"4.1"	""	""	"1152"	"0"	"37.000"	"30.000"	"54.2528407597157"	"13"	"0.003717"	"0.0384"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTMDSVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"915.99512"	"1830.98296"	"1830.98327"	"-0.17"	"-0.00015"	"4/128"	"4"	"128"	"89401.0831298828"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"102.4288"	"35745"	"35745"	"35741"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.2"	""	"4.4"	""	"4.3"	""	""	""	"4.5"	"4.9"	""	"1152"	"15"	"37.000"	"30.000"	"1.74350213458635"	"16"	"0.0008629"	"0.01059"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTMDSVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"610.99945"	"1830.98380"	"1830.98327"	"0.29"	"0.00018"	"13/128"	"13"	"128"	"638229.024963379"	"HCD"	"MS2"	"30.07947"	"4.3"	"100.000"	"102.4845"	"35824"	"35824"	"35819"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.2"	""	"8.2"	""	"4.8"	""	"8.3"	""	"7.5"	"7.1"	""	"1147"	"60"	"37.000"	"30.000"	"5.61737506631888E-05"	"24"	"0"	"1.161E-05"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTMDSVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"915.99561"	"1830.98393"	"1830.98327"	"0.37"	"0.00033"	"7/128"	"7"	"128"	"94290.8751831055"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"102.5695"	"35846"	"35846"	"35840"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.4"	""	"5.7"	""	"4.9"	""	"2.7"	""	"6.3"	"4.9"	""	"1147"	"34"	"37.000"	"30.000"	"0.0211608652779981"	"23"	"0"	"0.0001938"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTMDSVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"915.99609"	"1830.98491"	"1830.98327"	"0.90"	"0.00082"	"9/128"	"9"	"128"	"74135.9954223633"	"HCD"	"MS2"	"0"	"1.6"	"100.000"	"102.6905"	"35817"	"35817"	"35813"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.3"	""	"3.7"	""	"3.5"	""	"1.7"	""	""	"3.3"	""	"1152"	"34"	"37.000"	"30.000"	"0.0236277563320286"	"23"	"0"	"0.002931"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEENEAIASIAK"	"[R].tPEENEAIASIAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"916.01318"	"1831.01909"	"1831.02131"	"-1.21"	"-0.00111"	"8/130"	"8"	"130"	"337144.142028809"	"HCD"	"MS2"	"0"	"28.2"	"100.000"	"76.9632"	"26254"	"26254"	"26235"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.0"	""	"33.2"	""	"40.6"	""	"48.1"	""	"55.9"	"61.1"	""	"1079"	"49"	"37.000"	"30.000"	"0.000633857230889876"	"22"	"0"	"2.165E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEENEAIASIAK"	"[R].tPEENEAIASIAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"3"	"3"	"0.8909"	"0.0000"	"1"	"1"	"1"	"611.01129"	"1831.01932"	"1831.02131"	"-1.09"	"-0.00066"	"13/130"	"13"	"130"	"2907229.4105835"	"HCD"	"MS2"	"15.01636"	"64.8"	"100.000"	"76.8717"	"26226"	"26226"	"26211"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"93.4"	""	"67.8"	""	"92.1"	""	"113.9"	""	"125.5"	"126.5"	""	"1079"	"55"	"37.000"	"30.000"	"0.000174578777913534"	"22"	"0"	"2.537E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEENEAIASIAK"	"[R].tPEENEAIASIAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.9390"	"0.0000"	"1"	"1"	"1"	"916.01373"	"1831.02019"	"1831.02131"	"-0.61"	"-0.00056"	"12/130"	"12"	"130"	"1602219.8649292"	"HCD"	"MS2"	"0"	"108.5"	"100.000"	"77.2153"	"26366"	"26366"	"26348"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"137.7"	""	"107.0"	""	"160.0"	""	"174.9"	"0.6"	"209.6"	"239.5"	""	"1085"	"82"	"37.000"	"30.000"	"3.64250152712329E-07"	"22"	"0"	"2.838E-08"	"1.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEENEAIASIAK"	"[R].tPEENEAIASIAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.8873"	"0.0000"	"1"	"1"	"1"	"916.01385"	"1831.02043"	"1831.02131"	"-0.48"	"-0.00044"	"10/130"	"10"	"130"	"1777549.71972656"	"HCD"	"MS2"	"0"	"117.7"	"100.000"	"77.2469"	"26369"	"26369"	"26355"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"149.4"	""	"114.0"	""	"173.0"	""	"191.7"	"2.7"	"224.2"	"262.2"	""	"1086"	"71"	"37.000"	"30.000"	"4.13808902443799E-06"	"25"	"0"	"1.353E-07"	"1.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEENEAIASIAK"	"[R].tPEENEAIASIAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"916.01392"	"1831.02056"	"1831.02131"	"-0.41"	"-0.00038"	"8/130"	"8"	"130"	"516030.577270508"	"HCD"	"MS2"	"0"	"37.6"	"100.000"	"76.9110"	"26242"	"26242"	"26223"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.0"	""	"40.2"	""	"49.5"	""	"63.2"	""	"80.4"	"81.9"	""	"1077"	"40"	"37.000"	"30.000"	"0.00573041015313795"	"18"	"0"	"0.0001295"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEENEAIASIAK"	"[R].tPEENEAIASIAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"611.01172"	"1831.02060"	"1831.02131"	"-0.39"	"-0.00024"	"14/130"	"14"	"130"	"12042480.2862549"	"HCD"	"MS2"	"5.231234"	"201.7"	"82.664"	"77.1716"	"26349"	"26349"	"26333"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"253.8"	""	"199.8"	""	"293.5"	""	"303.8"	""	"402.4"	"464.0"	""	"1077"	"48"	"37.000"	"30.000"	"0.000820702407919841"	"21"	"0"	"1.567E-05"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEENEAIASIAK"	"[R].tPEENEAIASIAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"3"	"3"	"0.8772"	"0.0000"	"1"	"1"	"1"	"611.01215"	"1831.02188"	"1831.02131"	"0.31"	"0.00019"	"13/130"	"13"	"130"	"3859682.21942139"	"HCD"	"MS2"	"14.52519"	"88.5"	"100.000"	"76.9932"	"26266"	"26266"	"26249"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"110.3"	""	"94.0"	""	"126.6"	""	"146.7"	"1.2"	"174.8"	"186.5"	""	"1100"	"57"	"37.000"	"30.000"	"0.000106503208017063"	"23"	"0"	"3.025E-05"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEENEAIASIAK"	"[R].tPEENEAIASIAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"3"	"3"	"0.8776"	"0.0000"	"1"	"1"	"1"	"611.01306"	"1831.02463"	"1831.02131"	"1.81"	"0.00111"	"13/130"	"13"	"130"	"10933666.5296021"	"HCD"	"MS2"	"4.555819"	"229.9"	"100.000"	"77.2861"	"26385"	"26385"	"26368"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"285.1"	""	"225.9"	""	"323.3"	""	"369.4"	"0.6"	"457.3"	"521.3"	""	"1070"	"49"	"37.000"	"30.000"	"0.00062712452056825"	"22"	"0"	"6.753E-05"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"916.47058"	"1831.93389"	"1831.93876"	"-2.66"	"-0.00244"	"6/158"	"6"	"158"	"135160.45501709"	"HCD"	"MS2"	"21.74843"	"9.3"	"100.000"	"74.9364"	"25444"	"25444"	"25422"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.6"	""	"11.5"	""	"13.4"	""	"18.7"	""	"13.6"	"18.4"	""	"960"	"9"	"36.000"	"29.000"	"5.82426648223189"	"18"	"0.000936"	"0.01271"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"611.31653"	"1831.93503"	"1831.93876"	"-2.03"	"-0.00124"	"13/158"	"13"	"158"	"399365.14050293"	"HCD"	"MS2"	"26.15912"	"11.5"	"100.000"	"73.1535"	"24714"	"24714"	"24686"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.4"	""	"12.4"	""	"17.5"	""	"15.3"	""	"23.3"	"22.6"	""	"979"	"28"	"36.000"	"29.000"	"0.070917382231016"	"20"	"0"	"0.001034"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.5897"	"0.0000"	"1"	"1"	"1"	"611.31702"	"1831.93650"	"1831.93876"	"-1.23"	"-0.00075"	"12/158"	"12"	"158"	"639162.99206543"	"HCD"	"MS2"	"25.04563"	"11.7"	"100.000"	"74.9690"	"25457"	"25457"	"25438"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.9"	""	"12.1"	""	"21.6"	""	"20.4"	""	"19.3"	"21.9"	""	"980"	"39"	"36.000"	"29.000"	"0.00598681833480787"	"23"	"0"	"7.952E-05"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.5946"	"0.0000"	"1"	"1"	"1"	"611.31897"	"1831.94236"	"1831.93876"	"1.96"	"0.00120"	"13/158"	"13"	"158"	"620309.78515625"	"HCD"	"MS2"	"38.60078"	"14.2"	"100.000"	"75.0265"	"25469"	"25469"	"25441"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.5"	""	"15.1"	""	"25.2"	""	"18.7"	""	"32.1"	"27.0"	""	"989"	"37"	"36.000"	"29.000"	"0.00950968859946073"	"20"	"0"	"0.000509"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVTAEEAAGASPAK"	"[R].gDVTAEEAAGASPAk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9EPH2"	"MARCKS-related protein OS=Rattus norvegicus OX=10116 GN=Marcksl1 PE=2 SV=3"	"Q9EPH2"	"MARCKS-related protein OS=Rattus norvegicus OX=10116 GN=Marcksl1 PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.49457"	"1831.98186"	"1831.98018"	"0.92"	"0.00084"	"5/132"	"5"	"132"	"86407.600769043"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"49.7589"	"15228"	"15228"	"15201"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.7"	""	"5.5"	""	"6.2"	""	"10.5"	""	"11.0"	"11.3"	""	"1127"	"11"	"37.000"	"30.000"	"4.71947750478498"	"13"	"0.0023"	"0.02339"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLMESPANEMTPTR"	"[R].qLMESPANEMTPTR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"917.45496"	"1833.90264"	"1833.90363"	"-0.54"	"-0.00050"	"6/148"	"6"	"148"	"245522.374633789"	"HCD"	"MS2"	"0"	"15.1"	"100.000"	"64.7320"	"21297"	"21297"	"21279"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.8"	""	"22.2"	""	"19.1"	""	"14.3"	""	"27.6"	"34.3"	""	"810"	"41"	"36.000"	"29.000"	"0.00296793935921256"	"29"	"0"	"0.0003099"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLMESPANEMTPTR"	"[R].qLMESPANEMTPTR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"917.45538"	"1833.90349"	"1833.90363"	"-0.08"	"-0.00007"	"8/148"	"8"	"148"	"267845.581970215"	"HCD"	"MS2"	"0"	"15.6"	"100.000"	"64.7939"	"21307"	"21307"	"21287"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.2"	""	"26.6"	""	"24.6"	""	"14.5"	""	"23.6"	"30.3"	""	"821"	"18"	"36.000"	"29.000"	"0.597465952578897"	"14"	"0"	"0.003088"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLMESPANEMTPTR"	"[R].qLMESPANEMTPTR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.97296"	"1833.90433"	"1833.90363"	"0.38"	"0.00023"	"10/148"	"10"	"148"	"968908.330871582"	"HCD"	"MS2"	"21.5962"	"33.9"	"100.000"	"64.8731"	"21339"	"21339"	"21319"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"51.2"	""	"43.2"	""	"57.5"	""	"50.5"	"0.8"	"52.3"	"65.1"	""	"830"	"6"	"36.000"	"29.000"	"10.3050023869766"	"13"	"0.000936"	"0.01268"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEEAPAPGIDPEVR"	"[K].iIEEAPAPGIDPEVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"0"	"3"	"3"	"0.9556"	"0.0000"	"1"	"1"	"1"	"612.34131"	"1835.00937"	"1835.01119"	"-0.99"	"-0.00061"	"16/132"	"16"	"132"	"442536.035339355"	"HCD"	"MS2"	"3.618904"	"6.1"	"100.000"	"87.6786"	"30525"	"30525"	"30514"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.2"	""	"7.3"	""	"11.6"	""	"7.2"	""	"11.1"	"10.1"	""	"1200"	"45"	"37.000"	"30.000"	"0.00190612444238986"	"18"	"0"	"2.095E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEEAPAPGIDPEVR"	"[K].iIEEAPAPGIDPEVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"0"	"3"	"3"	"0.9302"	"0.0000"	"1"	"1"	"1"	"612.34155"	"1835.01010"	"1835.01119"	"-0.59"	"-0.00036"	"14/132"	"14"	"132"	"475073.808105469"	"HCD"	"MS2"	"5.709779"	"6.7"	"100.000"	"87.9428"	"30629"	"30629"	"30622"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.8"	""	"7.1"	""	"7.4"	""	"8.9"	""	"13.6"	"13.9"	""	"1197"	"43"	"37.000"	"30.000"	"0.00276735041307457"	"18"	"0"	"0.0001898"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEEAPAPGIDPEVR"	"[K].iIEEAPAPGIDPEVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"918.00879"	"1835.01030"	"1835.01119"	"-0.49"	"-0.00045"	"10/132"	"10"	"132"	"88243.1532592773"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"87.9564"	"30634"	"30634"	"30622"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.3"	""	"5.2"	""	"3.1"	""	"4.9"	""	"7.2"	"7.6"	""	"1197"	"33"	"37.000"	"30.000"	"0.0331943489205309"	"16"	"0"	"0.002461"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEEAPAPGIDPEVR"	"[K].iIEEAPAPGIDPEVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"918.00897"	"1835.01067"	"1835.01119"	"-0.29"	"-0.00026"	"9/132"	"9"	"132"	"125987.609069824"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"87.6830"	"30527"	"30527"	"30514"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.7"	""	"6.8"	""	"4.0"	""	"5.6"	""	"6.3"	"8.2"	""	"1193"	"22"	"37.000"	"30.000"	"0.395012144458101"	""	"0.009363"	"0.1212"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEEAPAPGIDPEVR"	"[K].iIEEAPAPGIDPEVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"612.34174"	"1835.01065"	"1835.01119"	"-0.29"	"-0.00018"	"16/132"	"16"	"132"	"536647.465820313"	"HCD"	"MS2"	"11.03688"	"5.9"	"100.000"	"87.6648"	"30514"	"30514"	"30503"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.4"	""	"7.8"	""	"12.0"	""	"5.4"	""	"11.5"	"13.5"	""	"1193"	"60"	"37.000"	"30.000"	"5.77577741259835E-05"	"20"	"0"	"1.277E-05"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEEAPAPGIDPEVR"	"[K].iIEEAPAPGIDPEVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"918.00928"	"1835.01128"	"1835.01119"	"0.05"	"0.00004"	"9/132"	"9"	"132"	"150344.215759277"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"87.6905"	"30524"	"30524"	"30512"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.4"	""	"5.3"	""	"6.5"	""	"4.6"	""	"7.5"	"9.7"	""	"1237"	"18"	"37.000"	"30.000"	"1.07730755119271"	"16"	"0.0006732"	"0.008397"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEEAPAPGIDPEVR"	"[K].iIEEAPAPGIDPEVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"0"	"3"	"3"	"0.9483"	"0.0000"	"1"	"1"	"1"	"612.34204"	"1835.01157"	"1835.01119"	"0.20"	"0.00013"	"16/132"	"16"	"132"	"635551.716918945"	"HCD"	"MS2"	"8.73284"	"7.6"	"100.000"	"87.9337"	"30620"	"30620"	"30609"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.5"	""	"8.8"	""	"11.1"	""	"12.6"	""	"13.6"	"13.9"	""	"1217"	"58"	"37.000"	"30.000"	"0.000106969651909387"	"19"	"0"	"1.76E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPAENVNQYLTDSK"	"[K].QPAENVNQYLTDSk.[F]"	"K14(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"918.46942"	"1835.93157"	"1835.93367"	"-1.15"	"-0.00105"	"6/148"	"6"	"148"	"82918.7409667969"	"HCD"	"MS2"	"0"	"1.9"	"100.000"	"90.9691"	"31794"	"31794"	"31777"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.2"	""	"3.7"	""	""	""	"1.9"	""	"5.6"	"2.3"	""	"1011"	"23"	"37.000"	"30.000"	"0.232659697945376"	"16"	"0.001374"	"0.01633"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPAENVNQYLTDSK"	"[K].QPAENVNQYLTDSk.[F]"	"K14(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"918.47101"	"1835.93474"	"1835.93367"	"0.58"	"0.00053"	"4/148"	"4"	"148"	"83140.8982543945"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"90.9151"	"31777"	"31777"	"31754"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.6"	""	"6.8"	""	"3.7"	""	"3.4"	""	"4.3"	"3.8"	""	"1068"	"12"	"37.000"	"30.000"	"3.137193142509"	"16"	"0.00736"	"0.08575"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVLDSVTDQDSK"	"[R].dGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.7083"	"0.0000"	"1"	"1"	"1"	"612.99048"	"1836.95688"	"1836.95911"	"-1.21"	"-0.00074"	"11/124"	"11"	"124"	"360373.671386719"	"HCD"	"MS2"	"22.95445"	"14.2"	"100.000"	"72.6933"	"24540"	"24540"	"24513"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.4"	""	"21.0"	""	"19.9"	""	"21.3"	""	"29.8"	"25.7"	""	"1062"	"48"	"37.000"	"30.000"	"0.000933457439012067"	"30"	"0"	"0.000249"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVLDSVTDQDSK"	"[R].dGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"612.99060"	"1836.95725"	"1836.95911"	"-1.01"	"-0.00062"	"13/124"	"13"	"124"	"1600793.94061279"	"HCD"	"MS2"	"9.493086"	"41.2"	"100.000"	"70.7918"	"23751"	"23751"	"23733"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"53.9"	""	"39.5"	""	"44.7"	""	"78.3"	""	"86.1"	"91.9"	""	"1067"	"52"	"37.000"	"30.000"	"0.000301393876062364"	"19"	"0"	"8.311E-06"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVLDSVTDQDSK"	"[R].dGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.9194"	"0.0000"	"1"	"1"	"1"	"612.99084"	"1836.95798"	"1836.95911"	"-0.61"	"-0.00038"	"16/124"	"16"	"124"	"7632913.57061768"	"HCD"	"MS2"	"3.62519"	"164.0"	"100.000"	"70.4345"	"23606"	"23606"	"23589"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"236.7"	""	"153.5"	""	"146.3"	""	"291.2"	""	"401.9"	"332.1"	""	"1050"	"62"	"37.000"	"30.000"	"3.47663664443425E-05"	"21"	"0"	"1.133E-06"	"1.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVLDSVTDQDSK"	"[R].dGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.9180"	"0.0000"	"1"	"1"	"1"	"612.99091"	"1836.95816"	"1836.95911"	"-0.51"	"-0.00031"	"13/124"	"13"	"124"	"2770232.98400879"	"HCD"	"MS2"	"6.747232"	"70.0"	"100.000"	"70.5968"	"23686"	"23686"	"23672"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"102.8"	""	"63.0"	""	"64.4"	""	"122.8"	""	"177.8"	"140.2"	""	"1049"	"61"	"37.000"	"30.000"	"3.96958853438501E-05"	"22"	"0"	"8.641E-06"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVLDSVTDQDSK"	"[R].dGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.9365"	"0.0000"	"1"	"1"	"1"	"612.99103"	"1836.95853"	"1836.95911"	"-0.31"	"-0.00019"	"9/124"	"9"	"124"	"6873531.33526611"	"HCD"	"MS2"	"5.315455"	"138.2"	"100.000"	"70.2898"	"23561"	"23561"	"23544"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"198.1"	""	"130.5"	""	"115.1"	""	"258.8"	"1.7"	"345.0"	"265.6"	""	"1057"	"63"	"37.000"	"30.000"	"2.73555210685875E-05"	"20"	"0"	"9.887E-07"	"1.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVLDSVTDQDSK"	"[R].dGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.9571"	"0.0000"	"1"	"1"	"1"	"918.98297"	"1836.95867"	"1836.95911"	"-0.24"	"-0.00022"	"10/124"	"10"	"124"	"308784.139831543"	"HCD"	"MS2"	"0"	"28.2"	"100.000"	"70.7135"	"23719"	"23719"	"23701"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.0"	""	"23.1"	""	"33.1"	""	"49.2"	""	"63.8"	"65.5"	""	"1059"	"70"	"37.000"	"30.000"	"4.7409564335851E-06"	"20"	"0"	"6.795E-07"	"1.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVLDSVTDQDSK"	"[R].dGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"918.98297"	"1836.95867"	"1836.95911"	"-0.24"	"-0.00022"	"12/124"	"12"	"124"	"677431.459228516"	"HCD"	"MS2"	"0"	"59.2"	"100.000"	"70.4904"	"23642"	"23642"	"23624"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"85.4"	""	"47.0"	""	"56.0"	""	"115.6"	"0.2"	"140.1"	"118.9"	""	"1059"	"76"	"37.000"	"30.000"	"1.19361966283471E-06"	"21"	"0"	"1.847E-07"	"1.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVLDSVTDQDSK"	"[R].dGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.9296"	"0.0000"	"1"	"1"	"1"	"918.98297"	"1836.95867"	"1836.95911"	"-0.24"	"-0.00022"	"11/124"	"11"	"124"	"632286.822387695"	"HCD"	"MS2"	"0"	"55.8"	"100.000"	"70.4067"	"23594"	"23594"	"23573"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"84.2"	""	"50.5"	""	"52.0"	""	"104.1"	""	"135.4"	"108.0"	""	"1059"	"71"	"37.000"	"30.000"	"4.51716510372314E-06"	"22"	"0"	"6.2E-07"	"1.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVLDSVTDQDSK"	"[R].dGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"918.98315"	"1836.95903"	"1836.95911"	"-0.04"	"-0.00004"	"17/124"	"17"	"124"	"282974.618652344"	"HCD"	"MS2"	"0"	"26.6"	"100.000"	"70.1859"	"23518"	"23518"	"23499"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.2"	""	"24.8"	""	"29.8"	""	"55.8"	""	"55.9"	"48.1"	""	"1061"	"64"	"37.000"	"30.000"	"2.28394366865853E-05"	"18"	"0"	"6.344E-06"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVLDSVTDQDSK"	"[R].dGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.8448"	"0.0000"	"1"	"1"	"1"	"612.99127"	"1836.95926"	"1836.95911"	"0.08"	"0.00005"	"12/124"	"12"	"124"	"339953.044555664"	"HCD"	"MS2"	"8.671965"	"13.8"	"100.000"	"72.8468"	"24589"	"24589"	"24562"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.7"	""	"17.7"	""	"22.6"	""	"18.6"	""	"26.3"	"26.5"	""	"1054"	"58"	"37.000"	"30.000"	"9.15821036750921E-05"	"25"	"0"	"9.018E-05"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEAGDGPGWGGPHPR"	"[R].yGEAGDGPGWGGPHPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.63000"	"1838.87546"	"1838.87716"	"-0.92"	"-0.00057"	"21/126"	"21"	"126"	"1383229.66802979"	"HCD"	"MS2"	"47.0684"	"39.8"	"100.000"	"45.9655"	"13682"	"13682"	"13661"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.2"	"2.6"	"45.7"	""	"54.7"	""	"72.1"	""	"68.0"	"75.9"	""	"643"	"57"	"35.000"	"28.000"	"6.48904785923621E-05"	"16"	"0"	"1.513E-07"	"1.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEAGDGPGWGGPHPR"	"[R].yGEAGDGPGWGGPHPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.63000"	"1838.87546"	"1838.87716"	"-0.92"	"-0.00057"	"21/126"	"21"	"126"	"3492708.36810303"	"HCD"	"MS2"	"48.15955"	"69.3"	"100.000"	"45.7030"	"13587"	"13587"	"13566"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"102.9"	""	"97.8"	""	"100.0"	""	"108.0"	""	"128.9"	"122.6"	""	"643"	"50"	"35.000"	"28.000"	"0.000287197713020254"	"16"	"0"	"5.648E-08"	"1.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTMEEILEGLK"	"[K].dSTmEEILEGLk.[F]"	"N-Term(TMT6plex); M4(Oxidation); K12(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"613.66516"	"1838.98093"	"1838.98215"	"-0.66"	"-0.00041"	"10/104"	"10"	"104"	"406768.182983398"	"HCD"	"MS2"	"5.702507"	"12.2"	"100.000"	"95.8242"	"33594"	"33594"	"33586"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.6"	""	"6.5"	""	"5.3"	""	"47.7"	""	"22.6"	"24.2"	""	"1110"	"38"	"37.000"	"30.000"	"0.00820905155433356"	"21"	"0"	"0.0002166"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTMEEILEGLK"	"[K].dSTmEEILEGLk.[F]"	"N-Term(TMT6plex); M4(Oxidation); K12(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"3"	"3"	"0.8649"	"0.0000"	"1"	"1"	"1"	"613.66547"	"1838.98185"	"1838.98215"	"-0.17"	"-0.00010"	"10/104"	"10"	"104"	"378431.860900879"	"HCD"	"MS2"	"3.141649"	"12.0"	"100.000"	"95.8075"	"33609"	"33609"	"33603"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.3"	""	"7.2"	""	"7.7"	""	"49.2"	""	"22.0"	"19.8"	""	"1103"	"37"	"37.000"	"30.000"	"0.0118180416651771"	"20"	"0"	"0.0001621"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTMEEILEGLK"	"[K].dSTmEEILEGLk.[F]"	"N-Term(TMT6plex); M4(Oxidation); K12(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"613.66553"	"1838.98203"	"1838.98215"	"-0.07"	"-0.00004"	"10/104"	"10"	"104"	"520608.713562012"	"HCD"	"MS2"	"13.07252"	"14.7"	"100.000"	"95.5514"	"33497"	"33497"	"33493"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.8"	""	"6.4"	""	"8.1"	"2.1"	"56.3"	""	"30.4"	"25.2"	""	"1106"	"35"	"37.000"	"30.000"	"0.0169716915958031"	"21"	"0"	"0.0001875"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTMEEILEGLK"	"[K].dSTmEEILEGLk.[F]"	"N-Term(TMT6plex); M4(Oxidation); K12(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"613.66614"	"1838.98386"	"1838.98215"	"0.93"	"0.00057"	"10/104"	"10"	"104"	"560585.412841797"	"HCD"	"MS2"	"15.36414"	"17.2"	"100.000"	"95.4973"	"33497"	"33497"	"33491"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.5"	""	"11.0"	""	"7.2"	""	"69.5"	""	"40.6"	"27.5"	""	"1095"	"36"	"37.000"	"30.000"	"0.0123419596865345"	"20"	"0"	"0.0001036"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGLEQEPEEPPGWR"	"[R].sGLEQEPEEPPGWR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"613.97284"	"1839.90396"	"1839.90746"	"-1.90"	"-0.00116"	"11/138"	"11"	"138"	"527866.524230957"	"HCD"	"MS2"	"9.067152"	"13.0"	"100.000"	"66.7231"	"22108"	"22108"	"22077"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.8"	""	"14.6"	""	"15.2"	""	"22.9"	""	"26.6"	"26.5"	""	"762"	"22"	"35.000"	"28.000"	"0.232768911489023"	"15"	"0"	"0.000664"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGLEQEPEEPPGWR"	"[R].sGLEQEPEEPPGWR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"920.45685"	"1839.90642"	"1839.90746"	"-0.56"	"-0.00052"	"4/138"	"4"	"138"	"102924.430847168"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"66.7922"	"22136"	"22136"	"22109"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.1"	""	"8.0"	""	"7.5"	""	"6.3"	""	"13.3"	"9.9"	""	"771"	"11"	"35.000"	"28.000"	"3.14792504158737"	"13"	"0.003449"	"0.0346"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGLEQEPEEPPGWR"	"[R].sGLEQEPEEPPGWR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"920.45703"	"1839.90679"	"1839.90746"	"-0.37"	"-0.00034"	"4/138"	"4"	"138"	"60724.3792724609"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"66.7590"	"22107"	"22107"	"22084"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.1"	""	"3.3"	""	"3.3"	""	"4.8"	""	"6.4"	"8.1"	""	"772"	"18"	"35.000"	"28.000"	"0.657033184240451"	"14"	"0.001374"	"0.01758"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGLEQEPEEPPGWR"	"[R].sGLEQEPEEPPGWR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"613.97394"	"1839.90726"	"1839.90746"	"-0.11"	"-0.00007"	"11/138"	"11"	"138"	"561812.329223633"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"66.9156"	"22171"	"22171"	"22148"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.3"	""	"10.8"	""	"17.7"	""	"20.6"	""	"23.4"	"24.8"	""	"779"	"17"	"35.000"	"28.000"	"0.787965970095186"	"16"	"0"	"0.0005987"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGLEQEPEEPPGWR"	"[R].sGLEQEPEEPPGWR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.97443"	"1839.90873"	"1839.90746"	"0.69"	"0.00042"	"10/138"	"10"	"138"	"321706.225219727"	"HCD"	"MS2"	"22.41607"	"11.7"	"100.000"	"67.2386"	"22303"	"22303"	"22274"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.5"	""	"12.9"	""	"16.1"	""	"19.5"	""	"23.8"	"21.1"	""	"781"	"3"	"35.000"	"28.000"	"17.5639033335829"	"13"	"0.002937"	"0.02734"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGTAEPDYGALYEGR"	"[K].iGTAEPDYGALYEGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"920.96777"	"1840.92827"	"1840.92786"	"0.22"	"0.00021"	"4/132"	"4"	"132"	"78388.4024658203"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"83.5479"	"28898"	"28898"	"28880"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.8"	""	"8.6"	""	"8.5"	""	"5.2"	""	"6.8"	"7.9"	""	"896"	"16"	"36.000"	"29.000"	"1.08962739606507"	"15"	"0.001546"	"0.01855"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPTFSPEEGYVK"	"[K].ePTFSPEEGYVk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.32813"	"1840.96982"	"1840.97330"	"-1.89"	"-0.00116"	"9/102"	"9"	"102"	"407517.060058594"	"HCD"	"MS2"	"8.942577"	"15.0"	"100.000"	"77.1315"	"26322"	"26322"	"26304"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.2"	""	"18.4"	""	"20.7"	""	"22.0"	""	"26.7"	"31.0"	""	"1026"	"26"	"37.000"	"30.000"	"0.144583044373866"	"14"	"0.003922"	"0.03978"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPTFSPEEGYVK"	"[K].ePTFSPEEGYVk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"614.32843"	"1840.97074"	"1840.97330"	"-1.39"	"-0.00085"	"12/102"	"12"	"102"	"739567.719726563"	"HCD"	"MS2"	"7.169718"	"25.9"	"100.000"	"77.0862"	"26314"	"26314"	"26285"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.6"	""	"36.0"	""	"41.7"	""	"38.8"	""	"36.1"	"49.6"	""	"1020"	"46"	"37.000"	"30.000"	"0.00128697519396509"	"21"	"0"	"0.001286"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPTFSPEEGYVK"	"[K].ePTFSPEEGYVk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"3"	"3"	"0.8913"	"0.0000"	"1"	"1"	"1"	"614.32849"	"1840.97092"	"1840.97330"	"-1.29"	"-0.00079"	"12/102"	"12"	"102"	"901623.428955078"	"HCD"	"MS2"	"4.982359"	"28.8"	"100.000"	"77.4820"	"26464"	"26464"	"26445"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.0"	""	"43.0"	""	"30.6"	""	"43.5"	"1.7"	"55.2"	"51.7"	""	"1016"	"46"	"37.000"	"30.000"	"0.0011718275718698"	"21"	"0"	"0.000482"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPTFSPEEGYVK"	"[K].ePTFSPEEGYVk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"920.98956"	"1840.97185"	"1840.97330"	"-0.79"	"-0.00073"	"6/102"	"6"	"102"	"118845.108825684"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"77.0492"	"26299"	"26299"	"26269"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.6"	""	"9.6"	""	"9.9"	""	"15.4"	""	"15.5"	"17.4"	""	"1020"	"13"	"37.000"	"30.000"	"2.44101347084546"	"13"	"0.009594"	"0.1271"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPTFSPEEGYVK"	"[K].ePTFSPEEGYVk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"920.98969"	"1840.97209"	"1840.97330"	"-0.66"	"-0.00060"	"13/102"	"13"	"102"	"161541.337219238"	"HCD"	"MS2"	"0"	"13.8"	"100.000"	"77.3722"	"26430"	"26430"	"26412"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.3"	""	"20.5"	""	"19.2"	""	"18.0"	""	"30.2"	"25.8"	""	"1020"	"44"	"37.000"	"30.000"	"0.0019524061909158"	"18"	"0"	"0.0004503"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPTFSPEEGYVK"	"[K].ePTFSPEEGYVk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.32910"	"1840.97275"	"1840.97330"	"-0.30"	"-0.00018"	"12/102"	"12"	"102"	"635650.623962402"	"HCD"	"MS2"	"6.341542"	"21.3"	"100.000"	"77.4369"	"26456"	"26456"	"26439"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.7"	""	"28.1"	""	"29.7"	""	"35.5"	""	"34.9"	"41.6"	""	"1017"	"34"	"37.000"	"30.000"	"0.0185050795870685"	"15"	"0.0001301"	"0.004118"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPTFSPEEGYVK"	"[K].ePTFSPEEGYVk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"920.99005"	"1840.97283"	"1840.97330"	"-0.26"	"-0.00024"	"13/102"	"13"	"102"	"193790.744934082"	"HCD"	"MS2"	"0"	"14.5"	"100.000"	"77.4405"	"26447"	"26447"	"26429"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.8"	""	"23.5"	""	"22.9"	""	"16.8"	""	"26.3"	"24.3"	""	"1016"	"36"	"37.000"	"30.000"	"0.0140884661316314"	"20"	"0"	"0.0009808"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPTFSPEEGYVK"	"[K].ePTFSPEEGYVk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"920.99054"	"1840.97380"	"1840.97330"	"0.27"	"0.00025"	"6/102"	"6"	"102"	"92234.2233276367"	"HCD"	"MS2"	"0"	"7.2"	"100.000"	"77.1337"	"26323"	"26323"	"26304"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.6"	""	"9.8"	""	"9.8"	""	"11.2"	""	"12.5"	"13.8"	""	"1025"	"23"	"37.000"	"30.000"	"0.288199929160054"	"14"	"0.005001"	"0.05606"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADGTGVVGGGAVGGPLSK"	"[M].aADGTGVVGGGAVGGPLSk.[D]"	"N-Term(Prot)(Acetyl); K19(TMT6plex)"	"1"	"1"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"921.00110"	"1840.99492"	"1840.99661"	"-0.92"	"-0.00084"	"11/174"	"11"	"174"	"94132.5856323242"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"89.4469"	"31203"	"31203"	"31189"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	"3.6"	""	"6.3"	""	"6.2"	""	"4.4"	"5.0"	""	"1095"	"34"	"37.000"	"30.000"	"0.0205297718729402"	"15"	"0"	"0.0004236"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADGTGVVGGGAVGGPLSK"	"[M].aADGTGVVGGGAVGGPLSk.[D]"	"N-Term(Prot)(Acetyl); K19(TMT6plex)"	"1"	"1"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"921.00201"	"1840.99675"	"1840.99661"	"0.08"	"0.00007"	"7/174"	"7"	"174"	"90534.7266235352"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"89.3723"	"31173"	"31173"	"31158"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.0"	""	"3.6"	""	""	""	"3.5"	""	"4.2"	"7.6"	""	"1106"	"25"	"37.000"	"30.000"	"0.189987545188631"	"14"	"0.0001301"	"0.004539"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDPIPTTETSIAPR"	"[R].lTDPIPTTETSIAPR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C1X8"	"AP2-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Aak1 PE=1 SV=1"	"P0C1X8"	"AP2-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Aak1 PE=1 SV=1"	"0"	"3"	"3"	"0.6944"	"0.0000"	"1"	"1"	"1"	"614.34418"	"1841.01798"	"1841.02176"	"-2.05"	"-0.00126"	"14/130"	"14"	"130"	"201497.739257813"	"HCD"	"MS2"	"5.818679"	"4.7"	"100.000"	"86.2837"	"29976"	"29976"	"29953"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.0"	""	"5.1"	""	"7.8"	""	"7.3"	""	"9.2"	"6.7"	""	"1048"	"36"	"37.000"	"30.000"	"0.0140388420220517"	"26"	"0"	"0.0006617"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDPIPTTETSIAPR"	"[R].lTDPIPTTETSIAPR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C1X8"	"AP2-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Aak1 PE=1 SV=1"	"P0C1X8"	"AP2-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Aak1 PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"614.34503"	"1841.02054"	"1841.02176"	"-0.66"	"-0.00041"	"12/130"	"12"	"130"	"153770.01776123"	"HCD"	"MS2"	"4.495476"	"4.6"	"100.000"	"86.3531"	"30001"	"30001"	"29977"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.1"	""	"6.1"	""	"8.3"	""	"8.6"	""	"7.6"	"7.4"	""	"1048"	"28"	"37.000"	"30.000"	"0.0767947068660897"	"22"	"0"	"0.000829"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGYELSPTAAANFTR"	"[R].nGYELSPTAAANFTR.[R]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"921.46539"	"1841.92351"	"1841.92311"	"0.22"	"0.00020"	"3/160"	"3"	"160"	"95062.6281738281"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"84.8223"	"29402"	"29402"	"29379"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.2"	""	"6.1"	""	"5.4"	""	"3.3"	""	"8.2"	"5.4"	""	"908"	"1"	"36.000"	"29.000"	"37.0728396596801"	"13"	"0.007627"	"0.09169"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYAFNHSADFETVR"	"[R].gYAFNHSADFETVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"614.96991"	"1842.89518"	"1842.89723"	"-1.11"	"-0.00068"	"14/132"	"14"	"132"	"1324378.74353027"	"HCD"	"MS2"	"6.377552"	"32.2"	"100.000"	"61.3419"	"19911"	"19911"	"19889"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"43.3"	""	"40.3"	""	"34.2"	""	"65.1"	"1.0"	"60.0"	"61.6"	""	"722"	"34"	"35.000"	"28.000"	"0.0138199732337373"	"19"	"0"	"3.616E-05"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYAFNHSADFETVR"	"[R].gYAFNHSADFETVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.97040"	"1842.89664"	"1842.89723"	"-0.32"	"-0.00020"	"13/132"	"13"	"132"	"1628681.82269287"	"HCD"	"MS2"	"35.46082"	"36.6"	"100.000"	"61.0171"	"19779"	"19779"	"19750"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.4"	""	"44.2"	""	"57.0"	""	"51.3"	"0.7"	"70.5"	"63.3"	""	"740"	"25"	"35.000"	"28.000"	"0.119454282503367"	"14"	"0"	"0.0001647"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYAFNHSADFETVR"	"[R].gYAFNHSADFETVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"3"	"3"	"0.9535"	"0.0000"	"1"	"1"	"1"	"614.97052"	"1842.89701"	"1842.89723"	"-0.12"	"-0.00007"	"13/132"	"13"	"132"	"1450469.93859863"	"HCD"	"MS2"	"3.072147"	"34.6"	"100.000"	"61.1398"	"19844"	"19844"	"19826"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.2"	""	"47.2"	""	"40.8"	""	"61.4"	""	"63.3"	"74.4"	""	"740"	"43"	"35.000"	"28.000"	"0.00198701764656993"	"17"	"0"	"5.242E-05"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYAFNHSADFETVR"	"[R].gYAFNHSADFETVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.97064"	"1842.89737"	"1842.89723"	"0.08"	"0.00005"	"14/132"	"14"	"132"	"1151653.49639893"	"HCD"	"MS2"	"18.62369"	"30.1"	"100.000"	"60.8290"	"19718"	"19718"	"19689"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.2"	""	"33.6"	""	"42.4"	""	"46.5"	""	"66.2"	"55.4"	""	"749"	"27"	"35.000"	"28.000"	"0.0676786710191093"	"14"	"0"	"0.0002535"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDAEFHTFFDER"	"[R].tTDAEFHTFFDER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"615.62585"	"1844.86301"	"1844.86526"	"-1.22"	"-0.00075"	"13/118"	"13"	"118"	"1464030.94006348"	"HCD"	"MS2"	"26.94327"	"24.8"	"100.000"	"80.5590"	"27708"	"27708"	"27696"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.8"	""	"30.5"	""	"24.3"	""	"42.3"	"1.5"	"50.7"	"46.5"	""	"491"	"42"	"33.000"	"26.000"	"0.0014422863604606"	"19"	"0"	"4.012E-05"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDAEFHTFFDER"	"[R].tTDAEFHTFFDER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"615.62634"	"1844.86448"	"1844.86526"	"-0.42"	"-0.00026"	"14/118"	"14"	"118"	"972285.447814941"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"80.8630"	"27831"	"27831"	"27813"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.8"	""	"13.0"	""	"19.3"	""	"27.8"	""	"36.5"	"35.4"	""	"499"	"37"	"33.000"	"26.000"	"0.00554715817717524"	"16"	"0"	"4.779E-05"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDAEFHTFFDER"	"[R].tTDAEFHTFFDER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"3"	"3"	"0.9149"	"0.0000"	"1"	"1"	"1"	"615.62646"	"1844.86484"	"1844.86526"	"-0.23"	"-0.00014"	"13/118"	"13"	"118"	"946838.071960449"	"HCD"	"MS2"	"6.227659"	"15.9"	"100.000"	"80.8230"	"27814"	"27814"	"27799"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.7"	""	"18.5"	""	"16.7"	""	"25.7"	""	"33.7"	"33.1"	""	"503"	"47"	"34.000"	"27.000"	"0.000496064318132886"	"20"	"0"	"2.523E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDAEFHTFFDER"	"[R].tTDAEFHTFFDER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"615.62659"	"1844.86521"	"1844.86526"	"-0.03"	"-0.00002"	"14/118"	"14"	"118"	"1581081.50769043"	"HCD"	"MS2"	"3.495333"	"27.1"	"100.000"	"80.5259"	"27693"	"27693"	"27677"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"42.8"	""	"31.7"	""	"30.0"	""	"48.2"	""	"47.9"	"57.9"	""	"505"	"35"	"34.000"	"27.000"	"0.00817073983747312"	"16"	"0"	"0.0001215"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.2632"	"0.0000"	"1"	"1"	"1"	"616.33002"	"1846.97550"	"1846.97818"	"-1.45"	"-0.00089"	"11/128"	"11"	"128"	"287681.481689453"	"HCD"	"MS2"	"27.09249"	"5.8"	"100.000"	"88.6647"	"30902"	"30902"	"30889"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.1"	""	"7.5"	""	"7.0"	""	"13.3"	""	"8.9"	"11.9"	""	"1132"	"19"	"37.000"	"30.000"	"0.693132768784017"	"27"	"0"	"0.00124"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.6562"	"0.0000"	"1"	"1"	"1"	"616.33032"	"1846.97641"	"1846.97818"	"-0.96"	"-0.00059"	"14/128"	"14"	"128"	"342360.445861816"	"HCD"	"MS2"	"19.53283"	"6.2"	"100.000"	"88.6512"	"30893"	"30893"	"30884"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.7"	""	"8.7"	""	"10.3"	""	"11.3"	""	"11.6"	"9.4"	""	"1137"	"32"	"37.000"	"30.000"	"0.0323392891184724"	"25"	"0"	"0.0002189"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"923.99194"	"1846.97661"	"1846.97818"	"-0.85"	"-0.00079"	"10/128"	"10"	"128"	"122091.266845703"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"88.6951"	"30910"	"30910"	"30895"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.5"	""	"4.1"	""	"7.2"	""	"10.7"	""	"6.4"	"2.4"	""	"1142"	"34"	"37.000"	"30.000"	"0.0219096837176092"	""	"0"	"0.001016"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.6316"	"0.0000"	"1"	"1"	"1"	"616.33057"	"1846.97715"	"1846.97818"	"-0.56"	"-0.00034"	"16/128"	"16"	"128"	"1575122.97424316"	"HCD"	"MS2"	"2.071816"	"13.3"	"100.000"	"89.2099"	"31110"	"31110"	"31097"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.8"	""	"16.5"	""	"16.1"	""	"26.8"	""	"25.2"	"23.4"	""	"1144"	"57"	"37.000"	"30.000"	"0.000107993105168308"	""	"0"	"5.538E-06"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.6316"	"0.0000"	"1"	"1"	"1"	"616.33063"	"1846.97733"	"1846.97818"	"-0.46"	"-0.00028"	"16/128"	"16"	"128"	"4088263.99969482"	"HCD"	"MS2"	"1.892545"	"27.0"	"100.000"	"88.9135"	"30995"	"30995"	"30986"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.1"	""	"39.3"	""	"40.8"	""	"58.3"	""	"39.0"	"44.7"	""	"1144"	"57"	"37.000"	"30.000"	"0.000124278507431006"	""	"0"	"7.622E-06"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.5593"	"0.0000"	"1"	"1"	"1"	"923.99243"	"1846.97759"	"1846.97818"	"-0.32"	"-0.00030"	"9/128"	"9"	"128"	"265180.137329102"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"89.2218"	"31115"	"31115"	"31108"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.0"	""	"7.2"	""	"14.5"	""	"25.1"	""	"12.4"	"13.1"	""	"1149"	"59"	"37.000"	"30.000"	"6.46085557543999E-05"	""	"0"	"5.679E-05"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.6761"	"0.0000"	"1"	"1"	"1"	"923.99243"	"1846.97759"	"1846.97818"	"-0.32"	"-0.00030"	"14/128"	"14"	"128"	"929990.24987793"	"HCD"	"MS2"	"0"	"29.0"	"100.000"	"88.9574"	"31011"	"31011"	"31003"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.1"	""	"35.8"	""	"41.7"	""	"70.1"	""	"46.0"	"37.3"	""	"1149"	"71"	"37.000"	"30.000"	"4.21007694288301E-06"	""	"0"	"2.714E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.6167"	"0.0000"	"1"	"1"	"1"	"616.33093"	"1846.97824"	"1846.97818"	"0.03"	"0.00002"	"17/128"	"17"	"128"	"4003248.45257568"	"HCD"	"MS2"	"1.424279"	"23.6"	"100.000"	"88.9300"	"31004"	"31004"	"30996"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"30.7"	""	"30.2"	""	"38.3"	""	"48.4"	""	"42.1"	"35.3"	""	"1165"	"60"	"37.000"	"30.000"	"6.2993527663105E-05"	""	"0"	"7.338E-06"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"923.99292"	"1846.97856"	"1846.97818"	"0.21"	"0.00019"	"15/128"	"15"	"128"	"337954.417358398"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"89.2245"	"31118"	"31118"	"31109"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.2"	""	"13.8"	""	"19.3"	""	"22.3"	""	"17.1"	"13.9"	""	"1171"	"54"	"37.000"	"30.000"	"0.000248042956622007"	""	"0"	"3.644E-05"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.3571"	"0.0000"	"1"	"1"	"1"	"616.33105"	"1846.97861"	"1846.97818"	"0.23"	"0.00014"	"16/128"	"16"	"128"	"2282182.49304199"	"HCD"	"MS2"	"1.773958"	"16.4"	"100.000"	"89.2036"	"31110"	"31110"	"31103"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.0"	""	"23.1"	""	"25.4"	""	"34.0"	""	"28.5"	"23.9"	""	"1171"	"56"	"37.000"	"30.000"	"0.000142405544731272"	""	"0"	"3.981E-06"	"0.99"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.6308"	"0.0000"	"1"	"1"	"1"	"923.99298"	"1846.97869"	"1846.97818"	"0.27"	"0.00025"	"13/128"	"13"	"128"	"893779.88482666"	"HCD"	"MS2"	"0"	"27.2"	"100.000"	"88.9554"	"31014"	"31014"	"31003"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.9"	""	"36.8"	""	"42.2"	""	"69.4"	"2.1"	"41.8"	"34.8"	""	"1169"	"65"	"37.000"	"30.000"	"1.7897176269922E-05"	""	"0"	"2.852E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.5926"	"0.0000"	"1"	"1"	"1"	"616.33160"	"1846.98026"	"1846.97818"	"1.13"	"0.00069"	"7/128"	"7"	"128"	"251848.386779785"	"HCD"	"MS2"	"32.38639"	"7.1"	"100.000"	"89.4785"	"31214"	"31214"	"31205"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.9"	""	"9.5"	""	"8.7"	""	"13.3"	""	"15.8"	"11.8"	""	"1168"	"27"	"37.000"	"30.000"	"0.110512867328867"	"25"	"0"	"0.0003995"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"923.99432"	"1846.98137"	"1846.97818"	"1.73"	"0.00160"	"6/128"	"6"	"128"	"97211.9064941406"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"88.6880"	"30911"	"30911"	"30899"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.9"	""	"3.6"	""	"4.1"	""	"6.9"	""	"4.5"	"2.5"	""	"1156"	"18"	"37.000"	"30.000"	"0.93095317713304"	"22"	"0"	"0.0027"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIIPVAPDYDK"	"[R].eEIIPVAPDYDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"924.01282"	"1847.01836"	"1847.02025"	"-1.03"	"-0.00095"	"9/108"	"9"	"108"	"117919.060424805"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"91.1468"	"31865"	"31865"	"31849"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.5"	""	"5.5"	""	"12.8"	""	"8.9"	""	"9.5"	"15.1"	""	"1190"	"30"	"37.000"	"30.000"	"0.0535201061010371"	"18"	"0.0001301"	"0.005017"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIIPVAPDYDK"	"[R].eEIIPVAPDYDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"616.34442"	"1847.01871"	"1847.02025"	"-0.83"	"-0.00051"	"10/108"	"10"	"108"	"539115.823364258"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"91.1153"	"31856"	"31856"	"31841"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.4"	""	"12.7"	""	"17.4"	""	"17.3"	""	"22.8"	"19.0"	""	"1189"	"24"	"37.000"	"30.000"	"0.260106891516581"	"15"	"0"	"0.0008"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIIPVAPDYDK"	"[R].eEIIPVAPDYDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"616.34448"	"1847.01889"	"1847.02025"	"-0.74"	"-0.00045"	"8/108"	"8"	"108"	"490747.162841797"	"HCD"	"MS2"	"29.65226"	"11.4"	"100.000"	"91.0613"	"31831"	"31831"	"31810"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.5"	""	"15.8"	""	"14.3"	""	"14.5"	""	"19.0"	"25.6"	""	"1189"	"15"	"37.000"	"30.000"	"1.74241603430132"	"19"	"0.0003538"	"0.006366"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIIPVAPDYDK"	"[R].eEIIPVAPDYDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"924.01355"	"1847.01982"	"1847.02025"	"-0.23"	"-0.00021"	"5/108"	"5"	"108"	"88700.4360351563"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"91.4369"	"31973"	"31973"	"31954"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.0"	""	""	""	"3.2"	""	"3.5"	""	"6.5"	"5.5"	""	"1165"	"10"	"37.000"	"30.000"	"6.14180367147909"	"13"	"0.00918"	"0.1199"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIIPVAPDYDK"	"[R].eEIIPVAPDYDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"924.01434"	"1847.02141"	"1847.02025"	"0.63"	"0.00058"	"5/108"	"5"	"108"	"77137.2059326172"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"91.4057"	"31966"	"31966"	"31955"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.8"	""	"5.1"	""	"5.5"	""	"5.8"	""	"6.6"	"8.7"	""	"1166"	"5"	"37.000"	"30.000"	"18.5638715516633"	"15"	"0.004069"	"0.04412"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIIPVAPDYDK"	"[R].eEIIPVAPDYDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"616.34534"	"1847.02146"	"1847.02025"	"0.65"	"0.00040"	"12/108"	"12"	"108"	"690929.177307129"	"HCD"	"MS2"	"14.12274"	"11.6"	"100.000"	"91.3494"	"31940"	"31940"	"31931"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.4"	""	"16.0"	""	"17.3"	""	"16.5"	""	"19.8"	"20.8"	""	"1163"	"14"	"37.000"	"30.000"	"2.48627818297148"	"18"	"0"	"0.003438"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIIPVAPDYDK"	"[R].eEIIPVAPDYDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"616.34552"	"1847.02201"	"1847.02025"	"0.95"	"0.00059"	"13/108"	"13"	"108"	"783082.047058105"	"HCD"	"MS2"	"16.1325"	"14.0"	"100.000"	"91.3825"	"31957"	"31957"	"31947"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.1"	""	"12.5"	""	"18.0"	""	"24.6"	""	"28.0"	"22.1"	""	"1185"	"20"	"37.000"	"30.000"	"0.580347816354654"	"15"	"0"	"0.001068"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIIPVAPDYDK"	"[R].eEIIPVAPDYDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"924.01544"	"1847.02361"	"1847.02025"	"1.82"	"0.00168"	"8/108"	"8"	"108"	"102632.765686035"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"91.1336"	"31864"	"31864"	"31841"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.3"	""	"7.2"	""	"4.5"	""	"5.0"	""	"8.4"	"9.0"	""	"1165"	"35"	"37.000"	"30.000"	"0.0190675954766923"	"20"	"0.002547"	"0.02506"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STAALEEDAQILK"	"[K].sTAALEEDAQILk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"2"	"2"	"Q5XXR3; O55043"	"Rho guanine nucleotide exchange factor 6 OS=Rattus norvegicus OX=10116 GN=Arhgef6 PE=1 SV=1;Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"Q5XXR3; O55043"	"Rho guanine nucleotide exchange factor 6 OS=Rattus norvegicus OX=10116 GN=Arhgef6 PE=1 SV=1; Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"0"	"3"	"3"	"0.6486"	"0.0000"	"1"	"1"	"1"	"616.35669"	"1847.05552"	"1847.05261"	"1.57"	"0.00097"	"6/116"	"6"	"116"	"195479.004211426"	"HCD"	"MS2"	"50.24868"	"7.8"	"100.000"	"91.7664"	"32097"	"32097"	"32084"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.3"	""	"6.9"	""	"11.1"	""	"15.1"	""	"15.8"	"16.9"	""	"1047"	"37"	"37.000"	"30.000"	"0.00952613399482326"	"28"	"0"	"0.002969"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STAALEEDAQILK"	"[K].sTAALEEDAQILk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"2"	"2"	"Q5XXR3; O55043"	"Rho guanine nucleotide exchange factor 6 OS=Rattus norvegicus OX=10116 GN=Arhgef6 PE=1 SV=1;Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"Q5XXR3; O55043"	"Rho guanine nucleotide exchange factor 6 OS=Rattus norvegicus OX=10116 GN=Arhgef6 PE=1 SV=1; Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"0"	"3"	"3"	"0.3913"	"0.0000"	"1"	"1"	"1"	"616.35669"	"1847.05552"	"1847.05261"	"1.57"	"0.00097"	"5/116"	"5"	"116"	"242190.279724121"	"HCD"	"MS2"	"49.19975"	"10.1"	"100.000"	"91.6477"	"32057"	"32057"	"32047"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.0"	""	"12.6"	""	"10.9"	""	"17.2"	""	"23.7"	"18.6"	""	"1047"	"23"	"37.000"	"30.000"	"0.267865440905351"	"28"	"0.002973"	"0.02847"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDNSSLTGESEPQTR"	"[K].vDNSSLTGESEPQTR.[S]"	"N-Term(TMT6plex)"	"1"	"4"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P09626; P06687; P06685; P06686"	"Potassium-transporting ATPase alpha chain 1 OS=Rattus norvegicus OX=10116 GN=Atp4a PE=1 SV=3; Sodium/potassium-transporting ATPase subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Atp1a3 PE=1 SV=2; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.9180"	"0.0000"	"1"	"1"	"1"	"924.95905"	"1848.91081"	"1848.91367"	"-1.54"	"-0.00143"	"9/160"	"9"	"160"	"174749.533203125"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"43.2526"	"12585"	"12585"	"12556"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.1"	""	"11.2"	""	"9.6"	""	"12.2"	""	"15.5"	"17.9"	""	"816"	"61"	"36.000"	"29.000"	"3.14528615378288E-05"	"22"	"0"	"6.162E-05"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDNSSLTGESEPQTR"	"[K].vDNSSLTGESEPQTR.[S]"	"N-Term(TMT6plex)"	"1"	"4"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P09626; P06687; P06685; P06686"	"Potassium-transporting ATPase alpha chain 1 OS=Rattus norvegicus OX=10116 GN=Atp4a PE=1 SV=3; Sodium/potassium-transporting ATPase subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Atp1a3 PE=1 SV=2; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"924.95996"	"1848.91265"	"1848.91367"	"-0.55"	"-0.00051"	"7/160"	"7"	"160"	"176956.651000977"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"43.1188"	"12541"	"12541"	"12515"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.2"	""	"12.6"	""	"15.1"	""	"14.2"	""	"16.5"	"15.5"	""	"824"	"33"	"36.000"	"29.000"	"0.018918958128879"	"21"	"0"	"0.002072"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVEPLDPPAGSAPGER"	"[R].qVEPLDPPAGSAPGER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"924.98553"	"1848.96379"	"1848.96531"	"-0.82"	"-0.00076"	"3/174"	"3"	"174"	"90617.9356079102"	"HCD"	"MS2"	"100"	"3.6"	"100.000"	"56.6511"	"18034"	"18034"	"18004"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.4"	""	"4.1"	""	"3.3"	""	"6.3"	""	"6.2"	"10.0"	""	"1138"	"4"	"37.000"	"30.000"	"24.8950077835046"	"13"	"0.0003538"	"0.00698"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLMESPANEMTPTR"	"[R].qLMESPANEmTPTR.[F]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"925.45056"	"1849.89385"	"1849.89855"	"-2.54"	"-0.00235"	"4/148"	"4"	"148"	"80730.3264770508"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"48.9926"	"14915"	"14915"	"14888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.4"	""	"8.0"	""	"8.0"	""	"3.5"	""	"7.8"	"5.7"	""	"694"	"11"	"35.000"	"28.000"	"2.97392132294938"	"14"	"0.0008629"	"0.01099"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLMESPANEMTPTR"	"[R].qLmESPANEMTPTR.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"925.45245"	"1849.89763"	"1849.89855"	"-0.50"	"-0.00046"	"5/148"	"5"	"148"	"102325.101623535"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"49.8276"	"15268"	"15268"	"15238"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.0"	""	"7.7"	""	"7.1"	""	"7.1"	""	"11.6"	"8.1"	""	"723"	"25"	"35.000"	"28.000"	"0.102354820648148"	"24"	"0.0008629"	"0.01031"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLMESPANEMTPTR"	"[R].qLmESPANEMTPTR.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"925.45294"	"1849.89861"	"1849.89855"	"0.03"	"0.00003"	"9/148"	"9"	"148"	"107141.501464844"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"50.2637"	"15434"	"15434"	"15406"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.7"	""	"8.0"	""	"13.2"	""	"6.7"	""	"8.0"	"11.0"	""	"738"	"8"	"35.000"	"28.000"	"5.64971273360669"	"13"	"0.003449"	"0.03562"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVQPTLDLTEAELR"	"[R].hVQPTLDLTEAELR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"3"	"3"	"0.8868"	"0.0000"	"1"	"1"	"1"	"617.67651"	"1851.01499"	"1851.01734"	"-1.27"	"-0.00078"	"10/140"	"10"	"140"	"508529.233764648"	"HCD"	"MS2"	"15.22634"	"12.4"	"100.000"	"73.6965"	"24947"	"24947"	"24923"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.4"	""	"17.4"	""	"16.2"	""	"18.9"	""	"23.4"	"21.7"	""	"1120"	"53"	"37.000"	"30.000"	"0.000305624402211111"	"21"	"0"	"3.245E-05"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVQPTLDLTEAELR"	"[R].hVQPTLDLTEAELR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"3"	"3"	"0.9623"	"0.0000"	"1"	"1"	"1"	"617.67676"	"1851.01572"	"1851.01734"	"-0.88"	"-0.00054"	"10/140"	"10"	"140"	"601067.986938477"	"HCD"	"MS2"	"36.68858"	"11.7"	"100.000"	"73.8362"	"24991"	"24991"	"24967"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.5"	""	"18.1"	""	"13.5"	""	"18.1"	""	"21.4"	"23.4"	""	"1114"	"53"	"37.000"	"30.000"	"0.000295022538247654"	"17"	"0"	"1.375E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVQPTLDLTEAELR"	"[R].hVQPTLDLTEAELR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"3"	"3"	"0.8269"	"0.0000"	"1"	"1"	"1"	"617.67694"	"1851.01627"	"1851.01734"	"-0.58"	"-0.00036"	"7/140"	"7"	"140"	"345896.526367188"	"HCD"	"MS2"	"16.09823"	"12.1"	"100.000"	"74.1522"	"25119"	"25119"	"25098"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.8"	""	"12.0"	""	"14.7"	""	"18.9"	"1.5"	"20.0"	"25.8"	""	"1125"	"52"	"37.000"	"30.000"	"0.000380296673657989"	"25"	"0"	"0.0001767"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVQPTLDLTEAELR"	"[R].hVQPTLDLTEAELR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"617.67719"	"1851.01700"	"1851.01734"	"-0.18"	"-0.00011"	"9/140"	"9"	"140"	"294256.114807129"	"HCD"	"MS2"	"39.17544"	"11.9"	"100.000"	"74.0355"	"25085"	"25085"	"25060"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.3"	""	"11.6"	""	"22.5"	""	"18.5"	""	"21.3"	"26.7"	""	"1138"	"40"	"37.000"	"30.000"	"0.00542141017329458"	"19"	"0"	"0.0006657"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GHVDPGENDLETALR"	"[K].gHVDPGENDLETALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PEC0"	"Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] OS=Rattus norvegicus OX=10116 GN=Nudt2 PE=2 SV=3"	"Q6PEC0"	"Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] OS=Rattus norvegicus OX=10116 GN=Nudt2 PE=2 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"617.98456"	"1851.93912"	"1851.93982"	"-0.38"	"-0.00023"	"17/142"	"17"	"142"	"1740349.5369873"	"HCD"	"MS2"	"20.67344"	"51.8"	"100.000"	"57.1951"	"18269"	"18269"	"18253"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.6"	""	"67.5"	""	"74.8"	""	"72.4"	"0.2"	"110.4"	"94.5"	""	"1050"	"43"	"37.000"	"30.000"	"0.00264947181220853"	"15"	"0"	"6.137E-06"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELDPDNDTYK"	"[K].aLELDPDNDTYk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O70593"	"Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus norvegicus OX=10116 GN=Sgta PE=1 SV=1"	"O70593"	"Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus norvegicus OX=10116 GN=Sgta PE=1 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"926.49097"	"1851.97466"	"1851.97403"	"0.34"	"0.00031"	"7/110"	"7"	"110"	"72364.9069824219"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"81.9046"	"28251"	"28251"	"28230"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.2"	""	"2.3"	""	"8.1"	""	"10.5"	""	"10.0"	"5.1"	""	"1107"	"16"	"37.000"	"30.000"	"1.44916429504921"	"22"	"0.002711"	"0.02618"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELDPDNDTYK"	"[K].aLELDPDNDTYk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O70593"	"Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus norvegicus OX=10116 GN=Sgta PE=1 SV=1"	"O70593"	"Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus norvegicus OX=10116 GN=Sgta PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"926.49207"	"1851.97685"	"1851.97403"	"1.53"	"0.00141"	"7/110"	"7"	"110"	"78048.0546264648"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"81.8600"	"28230"	"28230"	"28208"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.8"	""	"3.6"	""	"6.9"	""	"9.6"	""	"12.2"	"10.2"	""	"1128"	"19"	"37.000"	"30.000"	"0.738378604571666"	"20"	"0.003717"	"0.03849"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYGVYLEDSGHTLR"	"[K].dYGVYLEDSGHTLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"3"	"3"	"0.9516"	"0.0000"	"1"	"1"	"1"	"618.64539"	"1853.92160"	"1853.92311"	"-0.81"	"-0.00050"	"17/126"	"17"	"126"	"951872.896057129"	"HCD"	"MS2"	"26.21319"	"15.7"	"100.000"	"70.9532"	"23817"	"23817"	"23797"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.3"	""	"19.6"	""	"22.7"	""	"22.1"	""	"30.3"	"34.6"	""	"888"	"62"	"36.000"	"29.000"	"2.94024127643582E-05"	"19"	"0"	"1.974E-06"	"1.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYGVYLEDSGHTLR"	"[K].dYGVYLEDSGHTLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"3"	"3"	"0.9623"	"0.0000"	"1"	"1"	"1"	"618.64539"	"1853.92160"	"1853.92311"	"-0.81"	"-0.00050"	"16/126"	"16"	"126"	"1003862.22375488"	"HCD"	"MS2"	"32.1235"	"18.7"	"100.000"	"70.7694"	"23756"	"23756"	"23732"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"29.5"	""	"22.1"	""	"17.4"	""	"34.1"	""	"39.6"	"36.5"	""	"888"	"53"	"36.000"	"29.000"	"0.000235712693238559"	"17"	"0"	"2.047E-06"	"1.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVELTDDTFDK"	"[K].dVVELTDDTFDk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"618.99615"	"1854.97391"	"1854.97370"	"0.12"	"0.00007"	"6/108"	"6"	"108"	"131480.898071289"	"HCD"	"MS2"	"7.660794"	"4.9"	"100.000"	"99.3424"	"34808"	"34808"	"34800"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.8"	""	"3.7"	""	"5.2"	""	"8.0"	""	"12.2"	"11.8"	""	"1096"	"28"	"37.000"	"30.000"	"0.0793926975742529"	"17"	"0.000936"	"0.01163"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVELTDDTFDK"	"[K].dVVELTDDTFDk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"618.99622"	"1854.97409"	"1854.97370"	"0.21"	"0.00013"	"10/108"	"10"	"108"	"149633.931335449"	"HCD"	"MS2"	"9.822273"	"4.4"	"100.000"	"99.4269"	"34797"	"34797"	"34794"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.2"	""	"4.2"	""	"2.8"	""	"8.8"	""	"7.9"	"11.5"	""	"1091"	"29"	"37.000"	"30.000"	"0.062344013162782"	"18"	"0.0002479"	"0.005063"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPIPETNEGPVK"	"[K].sEPIPETNEGPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"928.01257"	"1855.01787"	"1855.02131"	"-1.86"	"-0.00172"	"8/122"	"8"	"122"	"105955.184753418"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"58.8596"	"18934"	"18934"	"18904"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.8"	""	"12.7"	""	"7.4"	""	"9.4"	""	"10.5"	"11.2"	""	"1059"	"18"	"37.000"	"30.000"	"0.818212225735591"	"14"	"0.0008629"	"0.01076"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPIPETNEGPVK"	"[K].sEPIPETNEGPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9841"	"0.0000"	"1"	"1"	"1"	"928.01337"	"1855.01946"	"1855.02131"	"-1.00"	"-0.00093"	"8/122"	"8"	"122"	"1228685.89221191"	"HCD"	"MS2"	"0"	"77.4"	"100.000"	"58.5307"	"18799"	"18799"	"18783"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"137.5"	""	"103.2"	""	"109.6"	""	"116.4"	""	"134.9"	"131.5"	""	"1050"	"63"	"37.000"	"30.000"	"2.44996174665001E-05"	"18"	"0"	"8.501E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPIPETNEGPVK"	"[K].sEPIPETNEGPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9194"	"0.0000"	"1"	"1"	"1"	"619.01141"	"1855.01969"	"1855.02131"	"-0.88"	"-0.00054"	"17/122"	"17"	"122"	"4150932.93054199"	"HCD"	"MS2"	"12.65916"	"91.0"	"100.000"	"58.1826"	"18657"	"18657"	"18639"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"156.1"	""	"120.8"	""	"123.2"	""	"143.6"	"0.5"	"157.4"	"158.9"	""	"1046"	"62"	"37.000"	"30.000"	"3.23967682265157E-05"	"21"	"0"	"3.354E-06"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPIPETNEGPVK"	"[K].sEPIPETNEGPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"619.01184"	"1855.02097"	"1855.02131"	"-0.19"	"-0.00012"	"12/122"	"12"	"122"	"1313618.527771"	"HCD"	"MS2"	"3.987892"	"42.0"	"100.000"	"58.6276"	"18854"	"18854"	"18831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.2"	""	"50.2"	""	"51.8"	""	"76.4"	""	"79.4"	"77.8"	""	"1045"	"28"	"37.000"	"30.000"	"0.090382904768989"	"15"	"0.0001301"	"0.004896"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPIPETNEGPVK"	"[K].sEPIPETNEGPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"619.01190"	"1855.02115"	"1855.02131"	"-0.09"	"-0.00005"	"13/122"	"13"	"122"	"2061502.82617188"	"HCD"	"MS2"	"15.27536"	"59.6"	"100.000"	"58.7978"	"18908"	"18908"	"18888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"97.3"	""	"72.7"	""	"82.2"	""	"80.2"	"2.0"	"111.0"	"119.4"	""	"1042"	"44"	"37.000"	"30.000"	"0.00199911474901478"	"19"	"0"	"0.002077"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPIPETNEGPVK"	"[K].sEPIPETNEGPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"619.01190"	"1855.02115"	"1855.02131"	"-0.09"	"-0.00005"	"15/122"	"15"	"122"	"4133235.52679443"	"HCD"	"MS2"	"1.328197"	"89.9"	"100.000"	"57.9965"	"18596"	"18596"	"18575"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"138.8"	""	"121.4"	""	"135.1"	""	"138.1"	""	"165.6"	"158.0"	""	"1042"	"39"	"37.000"	"30.000"	"0.00614947051174551"	"18"	"0"	"5.759E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPIPETNEGPVK"	"[K].sEPIPETNEGPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"928.01428"	"1855.02129"	"1855.02131"	"-0.01"	"-0.00001"	"15/122"	"15"	"122"	"961219.337341309"	"HCD"	"MS2"	"0"	"62.2"	"100.000"	"58.0426"	"18615"	"18615"	"18591"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"107.6"	""	"78.4"	""	"89.8"	""	"96.3"	"0.5"	"112.9"	"102.8"	""	"1042"	"52"	"37.000"	"30.000"	"0.000345810139679395"	"18"	"0"	"3.818E-05"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPIPETNEGPVK"	"[K].sEPIPETNEGPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.8644"	"0.0000"	"1"	"1"	"1"	"619.01202"	"1855.02152"	"1855.02131"	"0.11"	"0.00007"	"16/122"	"16"	"122"	"16183935.8964844"	"HCD"	"MS2"	"4.380135"	"159.4"	"51.945"	"58.2984"	"18720"	"18720"	"18703"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"273.3"	""	"202.2"	""	"230.5"	""	"246.1"	""	"274.4"	"285.7"	""	"1049"	"59"	"37.000"	"30.000"	"5.91215065764055E-05"	"24"	"0"	"3.429E-06"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPIPETNEGPVK"	"[K].sEPIPETNEGPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.8814"	"0.0000"	"1"	"1"	"1"	"619.01202"	"1855.02152"	"1855.02131"	"0.11"	"0.00007"	"17/122"	"17"	"122"	"16163496.916626"	"HCD"	"MS2"	"4.570638"	"172.0"	"55.766"	"58.4914"	"18784"	"18784"	"18767"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"281.5"	""	"223.2"	"2.0"	"224.5"	""	"275.5"	""	"300.1"	"322.6"	""	"1049"	"59"	"37.000"	"30.000"	"6.42311196514518E-05"	"23"	"0"	"3.128E-06"	"1.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPIPETNEGPVK"	"[K].sEPIPETNEGPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"928.01447"	"1855.02165"	"1855.02131"	"0.18"	"0.00017"	"18/122"	"18"	"122"	"885245.28338623"	"HCD"	"MS2"	"0"	"58.3"	"100.000"	"58.2334"	"18678"	"18678"	"18655"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.8"	""	"85.4"	""	"77.1"	""	"92.5"	""	"101.3"	"94.2"	""	"1047"	"61"	"37.000"	"30.000"	"4.64426172301872E-05"	"17"	"0"	"5.167E-05"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPIPETNEGPVK"	"[K].sEPIPETNEGPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"928.01447"	"1855.02165"	"1855.02131"	"0.18"	"0.00017"	"16/122"	"16"	"122"	"1126433.99755859"	"HCD"	"MS2"	"0"	"72.7"	"100.000"	"58.3469"	"18739"	"18739"	"18719"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"123.7"	""	"88.7"	""	"95.6"	""	"127.0"	""	"131.4"	"126.6"	""	"1047"	"62"	"37.000"	"30.000"	"3.25024939419438E-05"	"18"	"0"	"9.805E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSLNPVLDYDHGSR"	"[R].gPSLNPVLDYDHGSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"619.32043"	"1855.94675"	"1855.94999"	"-1.75"	"-0.00108"	"7/154"	"7"	"154"	"323696.590881348"	"HCD"	"MS2"	"74.22829"	"10.1"	"100.000"	"66.1206"	"21847"	"21847"	"21816"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.2"	""	"11.3"	""	"13.2"	""	"15.8"	""	"15.1"	"29.5"	""	"1008"	"12"	"37.000"	"30.000"	"3.04390109205696"	"15"	"0.002937"	"0.02768"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSLNPVLDYDHGSR"	"[R].gPSLNPVLDYDHGSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.32178"	"1855.95078"	"1855.94999"	"0.42"	"0.00026"	"9/154"	"9"	"154"	"422830.100524902"	"HCD"	"MS2"	"74.88012"	"12.0"	"100.000"	"65.9898"	"21809"	"21809"	"21780"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.9"	""	"9.4"	""	"16.6"	""	"24.3"	""	"23.5"	"28.4"	""	"1027"	"20"	"37.000"	"30.000"	"0.551493563237229"	"14"	"0.0001301"	"0.004637"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HSGPNSADSANDGFVR"	"[K].hSGPNSADSANDGFVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"620.63196"	"1859.88132"	"1859.88337"	"-1.10"	"-0.00068"	"17/162"	"17"	"162"	"5037865.8706665"	"HCD"	"MS2"	"45.54155"	"120.0"	"100.000"	"27.9575"	"6389"	"6389"	"6365"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"194.3"	""	"170.0"	""	"191.9"	""	"152.5"	""	"219.1"	"209.7"	""	"572"	"60"	"34.000"	"27.000"	"2.66296852383799E-05"	"21"	"0"	"2.651E-08"	"1.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTPTGATPPAGMASTR"	"[R].nTTPTGATPPAGMASTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"930.47803"	"1859.94878"	"1859.94828"	"0.27"	"0.00025"	"4/188"	"4"	"188"	"129823.296813965"	"HCD"	"MS2"	"0"	"6.9"	"100.000"	"42.0933"	"12122"	"12122"	"12092"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.0"	""	"5.7"	""	"6.6"	""	"14.7"	""	"15.6"	"12.4"	""	"1014"	"10"	"37.000"	"30.000"	"5.47025988170523"	"13"	"0.0002479"	"0.00567"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEGYHKPDQQK"	"[-].mEGYHkPDQQk.[L]"	"N-Term(Prot)(Acetyl); K6(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"620.99384"	"1860.96695"	"1860.96784"	"-0.48"	"-0.00030"	"5/102"	"5"	"102"	"1959641.18731689"	"HCD"	"MS2"	"5.940637"	"78.6"	"100.000"	"42.1145"	"12120"	"12120"	"12097"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"142.2"	""	"79.9"	""	"83.7"	""	"108.9"	""	"164.9"	"167.1"	""	"1122"	"12"	"37.000"	"30.000"	"3.53152968582888"	"19"	"0.0003538"	"0.007065"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEGYHKPDQQK"	"[-].mEGYHkPDQQk.[L]"	"N-Term(Prot)(Acetyl); K6(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"620.99390"	"1860.96714"	"1860.96784"	"-0.38"	"-0.00023"	"5/102"	"5"	"102"	"1994645.33856201"	"HCD"	"MS2"	"3.448147"	"78.5"	"100.000"	"41.9945"	"12081"	"12081"	"12060"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"144.0"	""	"80.8"	""	"88.1"	""	"105.1"	""	"159.8"	"168.3"	""	"1121"	"8"	"37.000"	"30.000"	"9.36646289321151"	"13"	"0.0008629"	"0.009925"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"930.99969"	"1860.99211"	"1860.99383"	"-0.92"	"-0.00086"	"10/128"	"10"	"128"	"94338.5543823242"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"96.7888"	"33940"	"33940"	"33932"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.8"	""	"3.2"	""	"3.5"	""	"8.5"	""	"4.4"	"3.7"	""	"1211"	"32"	"37.000"	"30.000"	"0.0365690895087398"	"17"	"0"	"0.0001371"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"930.99994"	"1860.99260"	"1860.99383"	"-0.66"	"-0.00061"	"4/128"	"4"	"128"	"54700.2362670898"	"HCD"	"MS2"	"0"	"1.4"	"100.000"	"97.3110"	"34112"	"34112"	"34108"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.7"	""	""	""	"1.9"	""	"5.3"	""	"3.6"	""	""	"1208"	"15"	"37.000"	"30.000"	"2.00926370189579"	"16"	"0.0023"	"0.02313"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"621.00244"	"1860.99277"	"1860.99383"	"-0.57"	"-0.00035"	"16/128"	"16"	"128"	"524024.983032227"	"HCD"	"MS2"	"4.411434"	"4.8"	"100.000"	"97.2470"	"34094"	"34094"	"34090"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.1"	""	"4.8"	""	"6.6"	""	"10.8"	""	"11.5"	"6.9"	""	"1208"	"60"	"37.000"	"30.000"	"5.43296539244141E-05"	"22"	"0"	"1.035E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"621.00256"	"1860.99314"	"1860.99383"	"-0.37"	"-0.00023"	"12/128"	"12"	"128"	"231720.105651855"	"HCD"	"MS2"	"9.001766"	"4.8"	"100.000"	"96.6913"	"33925"	"33925"	"33912"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.8"	""	"5.5"	""	"7.7"	""	"7.4"	""	"8.3"	"11.0"	""	"1227"	"32"	"37.000"	"30.000"	"0.0366281148319184"	"18"	"0"	"0.0003104"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.00262"	"1860.99332"	"1860.99383"	"-0.27"	"-0.00017"	"5/128"	"5"	"128"	"202517.464477539"	"HCD"	"MS2"	"2.635924"	"4.8"	"100.000"	"96.7393"	"33922"	"33922"	"33915"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.9"	""	"5.7"	""	"7.1"	""	"12.0"	""	"9.0"	"6.8"	""	"1227"	"27"	"37.000"	"30.000"	"0.111638647675723"	"14"	"0"	"0.001162"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"621.00269"	"1860.99350"	"1860.99383"	"-0.18"	"-0.00011"	"15/128"	"15"	"128"	"539022.485900879"	"HCD"	"MS2"	"2.594435"	"5.3"	"100.000"	"97.2127"	"34100"	"34100"	"34093"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.8"	""	"5.9"	""	"7.2"	""	"12.9"	""	"10.8"	"7.1"	""	"1225"	"54"	"37.000"	"30.000"	"0.000238290151308997"	"18"	"0"	"1.303E-05"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"621.00269"	"1860.99350"	"1860.99383"	"-0.18"	"-0.00011"	"14/128"	"14"	"128"	"1519021.89398193"	"HCD"	"MS2"	"4.594378"	"11.2"	"100.000"	"96.9915"	"34011"	"34011"	"34007"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.1"	""	"14.5"	""	"14.6"	""	"32.2"	""	"19.0"	"15.6"	""	"1225"	"62"	"37.000"	"30.000"	"3.98204435335143E-05"	"21"	"0"	"8.964E-06"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"931.00043"	"1860.99358"	"1860.99383"	"-0.14"	"-0.00013"	"5/128"	"5"	"128"	"61093.5545043945"	"HCD"	"MS2"	"0"	"1.8"	"100.000"	"97.2697"	"34119"	"34119"	"34114"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	"3.7"	""	"3.4"	""	"3.3"	""	"3.8"	"2.7"	""	"1225"	"32"	"37.000"	"30.000"	"0.0409360649510776"	"16"	"0.0001301"	"0.004175"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.9423"	"0.0000"	"1"	"1"	"1"	"931.00049"	"1860.99370"	"1860.99383"	"-0.07"	"-0.00007"	"14/128"	"14"	"128"	"239435.137329102"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"97.0472"	"34028"	"34028"	"34025"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.4"	""	"12.9"	""	"9.3"	""	"23.3"	""	"17.8"	"13.4"	""	"1227"	"52"	"37.000"	"30.000"	"0.000364598239310654"	"18"	"0"	"2.642E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.9559"	"0.0000"	"1"	"1"	"1"	"931.00061"	"1860.99394"	"1860.99383"	"0.06"	"0.00006"	"10/128"	"10"	"128"	"301466.503051758"	"HCD"	"MS2"	"0"	"10.6"	"100.000"	"97.0090"	"34035"	"34035"	"34029"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.2"	""	"10.0"	""	"16.4"	""	"28.8"	""	"21.4"	"13.9"	""	"1227"	"68"	"37.000"	"30.000"	"9.35006364454638E-06"	"20"	"0"	"1.041E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9483"	"0.0000"	"1"	"1"	"1"	"621.00287"	"1860.99405"	"1860.99383"	"0.12"	"0.00007"	"15/128"	"15"	"128"	"1503909.60083008"	"HCD"	"MS2"	"4.963611"	"11.2"	"100.000"	"96.9481"	"34015"	"34015"	"34012"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.6"	""	"15.3"	""	"19.3"	""	"27.3"	""	"17.6"	"15.1"	""	"1227"	"58"	"37.000"	"30.000"	"9.05345958164761E-05"	"19"	"0"	"3.888E-06"	"0.992"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"931.00067"	"1860.99407"	"1860.99383"	"0.13"	"0.00012"	"9/128"	"9"	"128"	"105460.279724121"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"96.7520"	"33948"	"33948"	"33933"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.6"	""	"6.8"	""	"4.2"	""	"10.3"	""	"7.5"	"5.9"	""	"1227"	"39"	"37.000"	"30.000"	"0.00691535639363676"	"16"	"0"	"0.001058"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDDKPETVIK"	"[R].eDDkPETVIk.[R]"	"N-Term(TMT6plex); K4(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.03418"	"1861.08799"	"1861.08856"	"-0.31"	"-0.00019"	"9/96"	"9"	"96"	"2223180.23358154"	"HCD"	"MS2"	"26.38614"	"134.6"	"100.000"	"51.3860"	"15902"	"15902"	"15877"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"223.5"	""	"141.4"	""	"150.6"	""	"237.6"	""	"265.1"	"258.9"	""	"829"	"8"	"36.000"	"29.000"	"5.96382010687047"	"13"	"0.0003538"	"0.006304"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDDKPETVIK"	"[R].eDDkPETVIk.[R]"	"N-Term(TMT6plex); K4(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.03418"	"1861.08799"	"1861.08856"	"-0.31"	"-0.00019"	"10/96"	"10"	"96"	"1977537.22344971"	"HCD"	"MS2"	"24.02558"	"119.2"	"100.000"	"51.7482"	"16039"	"16039"	"16011"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"191.3"	""	"133.9"	""	"141.3"	""	"210.2"	""	"245.3"	"208.6"	""	"829"	"4"	"36.000"	"29.000"	"16.0888326703124"	"13"	"0.005119"	"0.05848"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDDHPNHPFTDE"	"[K].yFDDHPNHPFTDE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.60999"	"1862.81540"	"1862.81831"	"-1.56"	"-0.00097"	"11/116"	"11"	"116"	"1467557.74407959"	"HCD"	"MS2"	"29.41659"	"29.7"	"100.000"	"59.8410"	"19331"	"19331"	"19319"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"51.7"	""	"28.6"	""	"36.2"	""	"42.7"	"0.1"	"60.7"	"61.7"	""	"207"	"16"	"30.000"	"23.000"	"0.247138467781514"	"14"	"0"	"0.001016"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDDHPNHPFTDE"	"[K].yFDDHPNHPFTDE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.61029"	"1862.81632"	"1862.81831"	"-1.07"	"-0.00066"	"12/116"	"12"	"116"	"3066568.8815918"	"HCD"	"MS2"	"0"	"39.1"	"100.000"	"60.4065"	"19534"	"19534"	"19521"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.9"	""	"45.3"	""	"54.9"	""	"54.1"	"0.3"	"70.6"	"79.1"	""	"212"	"22"	"30.000"	"23.000"	"0.072327901579017"	"14"	"0"	"0.0005894"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDDHPNHPFTDE"	"[K].yFDDHPNHPFTDE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.61047"	"1862.81687"	"1862.81831"	"-0.77"	"-0.00048"	"10/116"	"10"	"116"	"599583.912841797"	"HCD"	"MS2"	"0"	"14.0"	"100.000"	"60.6884"	"19645"	"19645"	"19630"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.3"	""	"17.9"	""	"20.2"	""	"17.9"	""	"24.1"	"28.7"	""	"212"	"16"	"30.000"	"23.000"	"0.285302689216253"	"13"	"0"	"0.002348"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDDHPNHPFTDE"	"[K].yFDDHPNHPFTDE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"621.61047"	"1862.81687"	"1862.81831"	"-0.77"	"-0.00048"	"12/116"	"12"	"116"	"1417894.08392334"	"HCD"	"MS2"	"0"	"22.2"	"100.000"	"60.3899"	"19540"	"19540"	"19528"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.7"	""	"27.3"	""	"27.5"	""	"30.5"	""	"37.7"	"46.0"	""	"212"	"19"	"30.000"	"23.000"	"0.141679124753923"	"15"	"0"	"0.0005411"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDDHPNHPFTDE"	"[K].yFDDHPNHPFTDE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"621.61047"	"1862.81687"	"1862.81831"	"-0.77"	"-0.00048"	"11/116"	"11"	"116"	"1544603.02947998"	"HCD"	"MS2"	"24.59008"	"26.6"	"100.000"	"60.1255"	"19429"	"19429"	"19419"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.3"	""	"31.7"	""	"32.8"	""	"42.5"	"1.0"	"41.5"	"57.8"	""	"212"	"18"	"30.000"	"23.000"	"0.165693650119941"	"15"	"0"	"0.000243"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDDHPNHPFTDE"	"[K].yFDDHPNHPFTDE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.61047"	"1862.81687"	"1862.81831"	"-0.77"	"-0.00048"	"5/116"	"5"	"116"	"2441364.69567871"	"HCD"	"MS2"	"0"	"40.7"	"100.000"	"60.1014"	"19426"	"19426"	"19421"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"60.1"	""	"45.2"	""	"56.7"	""	"65.4"	""	"82.8"	"78.8"	""	"212"	"14"	"30.000"	"23.000"	"0.412387853693937"	"13"	"0"	"0.002523"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETVQTTEDQILK"	"[K].eTVQTTEDQILk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9153"	"0.0000"	"1"	"1"	"1"	"932.02643"	"1863.04558"	"1863.04753"	"-1.05"	"-0.00097"	"15/118"	"15"	"118"	"210725.933288574"	"HCD"	"MS2"	"0"	"18.3"	"100.000"	"72.4716"	"24450"	"24450"	"24420"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.1"	""	"17.4"	""	"19.9"	""	"37.1"	""	"37.2"	"32.2"	""	"1091"	"59"	"37.000"	"30.000"	"7.25762885007049E-05"	"22"	"0"	"2.304E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETVQTTEDQILK"	"[K].eTVQTTEDQILk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7959"	"0.0000"	"1"	"1"	"1"	"621.68683"	"1863.04593"	"1863.04753"	"-0.86"	"-0.00053"	"9/118"	"9"	"118"	"2961119.79101563"	"HCD"	"MS2"	"3.941118"	"64.0"	"100.000"	"72.6281"	"24500"	"24500"	"24483"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"82.6"	""	"65.9"	""	"68.8"	""	"135.2"	"2.0"	"125.1"	"127.6"	""	"1090"	"49"	"37.000"	"30.000"	"0.00072844455651781"	"25"	"0"	"3.861E-05"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETVQTTEDQILK"	"[K].eTVQTTEDQILk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"621.68689"	"1863.04612"	"1863.04753"	"-0.76"	"-0.00047"	"9/118"	"9"	"118"	"1518250.75610352"	"HCD"	"MS2"	"21.7847"	"38.7"	"100.000"	"72.8293"	"24595"	"24595"	"24577"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.6"	""	"34.3"	""	"42.8"	""	"70.3"	""	"82.2"	"87.8"	""	"1090"	"62"	"37.000"	"30.000"	"3.21659588693655E-05"	"24"	"0"	"9.491E-06"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETVQTTEDQILK"	"[K].eTVQTTEDQILk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"932.02673"	"1863.04619"	"1863.04753"	"-0.72"	"-0.00067"	"6/118"	"6"	"118"	"139325.595275879"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"72.7924"	"24580"	"24580"	"24561"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.5"	""	"14.7"	""	"13.9"	""	"23.2"	""	"27.4"	"30.2"	""	"1090"	"32"	"37.000"	"30.000"	"0.0365928724844644"	"21"	"0.0002479"	"0.006004"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETVQTTEDQILK"	"[K].eTVQTTEDQILk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"621.68695"	"1863.04630"	"1863.04753"	"-0.66"	"-0.00041"	"9/118"	"9"	"118"	"2062895.65252686"	"HCD"	"MS2"	"15.2346"	"45.2"	"100.000"	"72.9324"	"24624"	"24624"	"24607"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.5"	""	"46.9"	""	"42.7"	""	"88.3"	"0.1"	"93.0"	"99.0"	""	"1092"	"60"	"37.000"	"30.000"	"5.01409597680035E-05"	"25"	"0"	"8.775E-06"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETVQTTEDQILK"	"[K].eTVQTTEDQILk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8043"	"0.0000"	"1"	"1"	"1"	"621.68713"	"1863.04685"	"1863.04753"	"-0.37"	"-0.00023"	"9/118"	"9"	"118"	"2856431.97753906"	"HCD"	"MS2"	"2.184914"	"71.1"	"100.000"	"72.5179"	"24468"	"24468"	"24452"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"99.0"	""	"66.1"	""	"75.4"	""	"152.3"	""	"142.9"	"144.1"	""	"1076"	"46"	"37.000"	"30.000"	"0.00130551623115434"	"25"	"0"	"0.000104"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETVQTTEDQILK"	"[K].eTVQTTEDQILk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"932.02722"	"1863.04717"	"1863.04753"	"-0.19"	"-0.00018"	"11/118"	"11"	"118"	"433907.485778809"	"HCD"	"MS2"	"0"	"36.7"	"100.000"	"72.7179"	"24536"	"24536"	"24515"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.2"	""	"33.0"	""	"37.2"	""	"71.6"	""	"75.3"	"74.0"	""	"1073"	"80"	"37.000"	"30.000"	"4.96100570317856E-07"	"30"	"0"	"1.045E-07"	"1.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPEPSSTLSSDTVSR"	"[R].aTPEPSSTLSSDTVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.9579"	"0.0000"	"1"	"1"	"1"	"932.47784"	"1863.94841"	"1863.94972"	"-0.70"	"-0.00065"	"15/146"	"15"	"146"	"591941.405273438"	"HCD"	"MS2"	"0"	"24.0"	"100.000"	"47.6322"	"14373"	"14373"	"14349"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"48.8"	""	"25.1"	""	"25.0"	""	"37.5"	""	"51.8"	"40.7"	""	"1085"	"95"	"37.000"	"30.000"	"1.71159000818073E-08"	"23"	"0"	"2.511E-07"	"1.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPEPSSTLSSDTVSR"	"[R].aTPEPSSTLSSDTVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"932.47791"	"1863.94853"	"1863.94972"	"-0.63"	"-0.00059"	"5/146"	"5"	"146"	"79078.7313842773"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"47.9443"	"14500"	"14500"	"14474"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.2"	""	"5.3"	""	"2.2"	""	"5.0"	""	"7.1"	"3.4"	""	"1089"	"11"	"37.000"	"30.000"	"4.69891819259115"	"15"	"0.001211"	"0.01567"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPEPSSTLSSDTVSR"	"[R].aTPEPSSTLSSDTVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"932.47791"	"1863.94853"	"1863.94972"	"-0.63"	"-0.00059"	"7/146"	"7"	"146"	"275705.744140625"	"HCD"	"MS2"	"0"	"10.0"	"100.000"	"47.9052"	"14473"	"14473"	"14442"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.4"	""	"9.6"	""	"11.2"	""	"19.4"	""	"16.3"	"12.9"	""	"1089"	"27"	"37.000"	"30.000"	"0.108892478801503"	"15"	"0"	"0.002365"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPEPSSTLSSDTVSR"	"[R].aTPEPSSTLSSDTVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"621.98779"	"1863.94883"	"1863.94972"	"-0.48"	"-0.00030"	"10/146"	"10"	"146"	"1497234.87585449"	"HCD"	"MS2"	"5.366705"	"24.0"	"100.000"	"47.6000"	"14360"	"14360"	"14333"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.6"	""	"26.2"	""	"27.1"	""	"44.0"	""	"52.0"	"44.3"	""	"1091"	"45"	"37.000"	"30.000"	"0.00155165353411284"	"26"	"0"	"1.705E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPEPSSTLSSDTVSR"	"[R].aTPEPSSTLSSDTVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"932.47833"	"1863.94939"	"1863.94972"	"-0.18"	"-0.00016"	"8/146"	"8"	"146"	"239871.946228027"	"HCD"	"MS2"	"0"	"11.9"	"100.000"	"48.2085"	"14595"	"14595"	"14574"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.7"	""	"10.5"	""	"15.9"	""	"22.5"	""	"19.6"	"21.8"	""	"1083"	"24"	"37.000"	"30.000"	"0.234746140646847"	"15"	"0.0002479"	"0.005773"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPEPSSTLSSDTVSR"	"[R].aTPEPSSTLSSDTVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"621.98828"	"1863.95029"	"1863.94972"	"0.31"	"0.00019"	"16/146"	"16"	"146"	"1046070.35430908"	"HCD"	"MS2"	"18.60944"	"21.4"	"100.000"	"47.9237"	"14480"	"14480"	"14458"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.8"	""	"26.7"	""	"28.2"	""	"32.1"	""	"42.0"	"40.2"	""	"1098"	"36"	"37.000"	"30.000"	"0.0153664074447926"	"17"	"0"	"1.958E-06"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDLEATSEHFK"	"[K].tEDLEATSEHFk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"0"	"3"	"3"	"0.8936"	"0.0000"	"1"	"1"	"1"	"622.32825"	"1864.97019"	"1864.96928"	"0.49"	"0.00030"	"13/104"	"13"	"104"	"917652.743469238"	"HCD"	"MS2"	"15.32225"	"32.9"	"100.000"	"61.3187"	"19902"	"19902"	"19873"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.4"	""	"32.6"	""	"32.1"	""	"58.7"	""	"83.4"	"75.2"	""	"1108"	"47"	"37.000"	"30.000"	"0.00102685651937181"	"20"	"0"	"4.605E-06"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLEDGLPVHDGK"	"[K].eTLEDGLPVHDGk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P23711"	"Heme oxygenase 2 OS=Rattus norvegicus OX=10116 GN=Hmox2 PE=1 SV=1"	"P23711"	"Heme oxygenase 2 OS=Rattus norvegicus OX=10116 GN=Hmox2 PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"623.34283"	"1868.01395"	"1868.01656"	"-1.40"	"-0.00087"	"14/116"	"14"	"116"	"869426.436645508"	"HCD"	"MS2"	"0"	"28.8"	"100.000"	"62.4025"	"20354"	"20354"	"20329"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.8"	""	"32.1"	""	"38.8"	""	"48.9"	"0.3"	"56.6"	"62.2"	""	"1129"	"52"	"37.000"	"30.000"	"0.00037641242122109"	"24"	"0"	"9.387E-06"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLEDGLPVHDGK"	"[K].eTLEDGLPVHDGk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P23711"	"Heme oxygenase 2 OS=Rattus norvegicus OX=10116 GN=Hmox2 PE=1 SV=1"	"P23711"	"Heme oxygenase 2 OS=Rattus norvegicus OX=10116 GN=Hmox2 PE=1 SV=1"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"623.34387"	"1868.01706"	"1868.01656"	"0.27"	"0.00017"	"13/116"	"13"	"116"	"648619.171142578"	"HCD"	"MS2"	"6.483777"	"22.9"	"100.000"	"62.5583"	"20401"	"20401"	"20381"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.5"	""	"19.6"	""	"30.1"	""	"37.8"	""	"50.8"	"52.0"	""	"1150"	"36"	"37.000"	"30.000"	"0.0132028547266461"	"16"	"0"	"7.125E-05"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEQGPPSSEYIFER"	"[K].tEQGPPSSEYIFER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"934.96295"	"1868.91863"	"1868.92277"	"-2.22"	"-0.00207"	"4/150"	"4"	"150"	"85822.4615478516"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"70.7854"	"23763"	"23763"	"23732"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.1"	""	"4.6"	""	"8.8"	""	"5.8"	""	"9.0"	"6.1"	""	"850"	"11"	"36.000"	"29.000"	"3.28389248665674"	"13"	"0.004942"	"0.05572"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANGAPISQGVDTANPTK"	"[K].ANGAPISQGVDTANPTk.[Q]"	"K17(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"2"	"2"	"0.8873"	"0.0000"	"1"	"1"	"1"	"935.49634"	"1869.98540"	"1869.98677"	"-0.73"	"-0.00069"	"9/176"	"9"	"176"	"312352.848449707"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"64.7702"	"21298"	"21298"	"21271"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.7"	""	"14.7"	""	"5.2"	""	"8.4"	""	"15.4"	"14.7"	""	"1118"	"71"	"37.000"	"30.000"	"4.18226750785734E-06"	"25"	"0"	"0.0002634"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANGAPISQGVDTANPTK"	"[K].ANGAPISQGVDTANPTk.[Q]"	"K17(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"935.49640"	"1869.98552"	"1869.98677"	"-0.67"	"-0.00062"	"10/176"	"10"	"176"	"330498.288269043"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"64.6695"	"21276"	"21276"	"21247"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.4"	""	"14.0"	""	"11.8"	""	"13.1"	""	"12.9"	"12.5"	""	"1120"	"84"	"37.000"	"30.000"	"2.12906061939514E-07"	"30"	"0"	"5.912E-05"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVTELNEPLSNEER"	"[K].nVTELNEPLSNEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.9123"	"0.0000"	"1"	"1"	"1"	"624.98706"	"1872.94663"	"1872.95005"	"-1.83"	"-0.00114"	"12/150"	"12"	"150"	"1050726.15155029"	"HCD"	"MS2"	"0"	"26.0"	"100.000"	"61.9418"	"20170"	"20170"	"20153"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"41.4"	""	"31.6"	""	"34.2"	""	"43.8"	""	"46.1"	"50.9"	""	"935"	"57"	"36.000"	"29.000"	"9.83516420590827E-05"	"21"	"0"	"3.324E-05"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVTELNEPLSNEER"	"[K].nVTELNEPLSNEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"624.98724"	"1872.94718"	"1872.95005"	"-1.53"	"-0.00096"	"14/150"	"14"	"150"	"932735.256225586"	"HCD"	"MS2"	"56.67584"	"27.2"	"100.000"	"62.2442"	"20290"	"20290"	"20269"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.8"	""	"31.7"	""	"35.1"	""	"41.0"	""	"49.8"	"56.3"	""	"932"	"31"	"36.000"	"29.000"	"0.0415322937170325"	"18"	"0"	"0.0001228"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVTELNEPLSNEER"	"[K].nVTELNEPLSNEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.9273"	"0.0000"	"1"	"1"	"1"	"624.98737"	"1872.94754"	"1872.95005"	"-1.34"	"-0.00084"	"12/150"	"12"	"150"	"1147835.97692871"	"HCD"	"MS2"	"21.52816"	"27.4"	"100.000"	"62.0519"	"20199"	"20199"	"20187"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.6"	""	"26.3"	""	"38.2"	""	"40.8"	""	"54.9"	"53.8"	""	"943"	"55"	"36.000"	"29.000"	"0.00016499914625387"	"20"	"0"	"1.891E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVTELNEPLSNEER"	"[K].nVTELNEPLSNEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"936.97772"	"1872.94817"	"1872.95005"	"-1.01"	"-0.00094"	"7/150"	"7"	"150"	"175649.288696289"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"61.9624"	"20178"	"20178"	"20163"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.3"	""	"11.4"	""	"15.8"	""	"15.1"	""	"12.2"	"15.6"	""	"947"	"36"	"36.000"	"29.000"	"0.0110235121050438"	"18"	"0"	"3.584E-05"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVTELNEPLSNEER"	"[K].nVTELNEPLSNEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"624.98761"	"1872.94828"	"1872.95005"	"-0.95"	"-0.00059"	"15/150"	"15"	"150"	"912695.598144531"	"HCD"	"MS2"	"24.81767"	"24.4"	"100.000"	"62.3656"	"20323"	"20323"	"20305"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.0"	""	"32.8"	""	"27.2"	""	"33.7"	""	"45.7"	"57.6"	""	"947"	"22"	"36.000"	"29.000"	"0.311400985987791"	"15"	"0"	"0.0002304"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVTELNEPLSNEER"	"[K].nVTELNEPLSNEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"936.97900"	"1872.95073"	"1872.95005"	"0.36"	"0.00034"	"6/150"	"6"	"150"	"200495.009460449"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"62.1296"	"20230"	"20230"	"20215"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.3"	""	"8.2"	""	"16.0"	""	"18.3"	""	"19.5"	"16.2"	""	"959"	"34"	"36.000"	"29.000"	"0.0206437509730775"	"15"	"0"	"0.000214"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPLGLDHMASSIER"	"[R].mGPLGLDHmASSIER.[M]"	"N-Term(TMT6plex); M1(Oxidation); M9(Oxidation)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"625.64825"	"1874.93021"	"1874.93018"	"0.01"	"0.00001"	"14/126"	"14"	"126"	"850685.32598877"	"HCD"	"MS2"	"7.009568"	"25.3"	"100.000"	"49.5050"	"15136"	"15136"	"15110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.0"	""	"22.3"	""	"31.2"	""	"55.0"	"2.1"	"52.0"	"46.6"	""	"906"	"24"	"36.000"	"29.000"	"0.176643719964474"	"14"	"0.0004639"	"0.007826"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLELPEDEEEK"	"[K].eGLELPEDEEEk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"937.98486"	"1874.96245"	"1874.96352"	"-0.57"	"-0.00054"	"11/108"	"11"	"108"	"157153.706481934"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"73.2697"	"24774"	"24774"	"24743"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.7"	""	"7.3"	""	"10.2"	""	"21.7"	""	"33.0"	"25.5"	""	"1089"	"16"	"37.000"	"30.000"	"1.22179370749972"	"26"	"0.0003538"	"0.007056"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLELPEDEEEK"	"[K].eGLELPEDEEEk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"937.98596"	"1874.96465"	"1874.96352"	"0.60"	"0.00056"	"10/108"	"10"	"108"	"213315.575195313"	"HCD"	"MS2"	"0"	"17.7"	"100.000"	"73.4302"	"24826"	"24826"	"24796"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.6"	""	"8.6"	""	"15.6"	""	"40.1"	""	"41.8"	"34.9"	""	"1112"	"15"	"37.000"	"30.000"	"1.69462961423316"	"17"	"0.0002479"	"0.005417"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQPHLDEFQEK"	"[K].mQPHLDEFQEk.[W]"	"N-Term(TMT6plex); M1(Oxidation); K11(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"625.99384"	"1875.96695"	"1875.96751"	"-0.29"	"-0.00018"	"7/106"	"7"	"106"	"1726459.86004639"	"HCD"	"MS2"	"37.88292"	"73.5"	"100.000"	"53.2152"	"16649"	"16649"	"16622"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"99.2"	""	"75.9"	""	"72.2"	""	"133.3"	""	"171.4"	"151.9"	""	"1108"	"17"	"37.000"	"30.000"	"1.23171367942088"	"14"	"0.00912"	"0.119"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSIGTENTEENRR"	"[R].lQSIGTENTEENRR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"1"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"625.99518"	"1875.97098"	"1875.97218"	"-0.64"	"-0.00040"	"9/144"	"9"	"144"	"3213328.08233643"	"HCD"	"MS2"	"0"	"98.2"	"100.000"	"36.0362"	"9661"	"9661"	"9640"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"194.4"	""	"125.6"	""	"116.6"	""	"145.0"	"1.0"	"158.9"	"187.3"	""	"1145"	"34"	"37.000"	"30.000"	"0.0245344027927534"	"19"	"0"	"4.149E-07"	"1.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSIGTENTEENRR"	"[R].lQSIGTENTEENRR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"1"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"625.99548"	"1875.97190"	"1875.97218"	"-0.15"	"-0.00010"	"8/144"	"8"	"144"	"2431474.51324463"	"HCD"	"MS2"	"0"	"85.6"	"100.000"	"36.1802"	"9713"	"9713"	"9697"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"169.2"	""	"110.3"	""	"103.9"	""	"119.3"	""	"146.0"	"167.1"	""	"1149"	"29"	"37.000"	"30.000"	"0.0700309524582336"	"22"	"0"	"8.032E-06"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDGTETSTNLHQK"	"[K].sDGTETSTNLHQk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"625.99780"	"1875.97885"	"1875.98124"	"-1.27"	"-0.00080"	"8/118"	"8"	"118"	"416033.796447754"	"HCD"	"MS2"	"45.58747"	"28.9"	"100.000"	"27.6407"	"6260"	"6260"	"6231"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.7"	""	"32.2"	""	"30.5"	""	"52.0"	""	"65.7"	"51.7"	""	"1219"	"36"	"37.000"	"30.000"	"0.0171780439660569"	"15"	"0"	"0.0001162"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQMSHFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.31860"	"1876.94126"	"1876.94246"	"-0.64"	"-0.00040"	"11/134"	"11"	"134"	"802354.150146484"	"HCD"	"MS2"	"8.166234"	"16.7"	"100.000"	"63.2753"	"20708"	"20708"	"20694"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.9"	""	"19.3"	""	"22.9"	""	"27.8"	"0.8"	"32.0"	"30.5"	""	"953"	"73"	"36.000"	"29.000"	"2.18807853116768E-06"	"17"	"0"	"1.764E-06"	"1.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQMSHFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.31879"	"1876.94181"	"1876.94246"	"-0.35"	"-0.00022"	"10/134"	"10"	"134"	"562246.878234863"	"HCD"	"MS2"	"10.61168"	"14.8"	"100.000"	"63.4176"	"20751"	"20751"	"20731"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.4"	""	"17.7"	""	"22.1"	""	"26.5"	""	"28.0"	"29.9"	""	"976"	"59"	"36.000"	"29.000"	"6.17191337565921E-05"	"16"	"0"	"8.371E-06"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQMSHFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.9510"	"0.0000"	"1"	"1"	"1"	"626.31885"	"1876.94199"	"1876.94246"	"-0.25"	"-0.00016"	"11/134"	"11"	"134"	"10294549.0952148"	"HCD"	"MS2"	"1.5693"	"40.0"	"84.018"	"62.9828"	"20590"	"20590"	"20583"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.1"	"3.0"	"45.2"	""	"52.4"	""	"78.5"	""	"70.3"	"74.9"	""	"973"	"102"	"36.000"	"29.000"	"3.15560651921218E-09"	"24"	"0"	"1.539E-08"	"1.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQMSHFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.9596"	"0.0000"	"1"	"1"	"1"	"626.31897"	"1876.94236"	"1876.94246"	"-0.06"	"-0.00004"	"11/134"	"11"	"134"	"9173431.45727539"	"HCD"	"MS2"	"1.674942"	"42.7"	"100.000"	"63.0811"	"20615"	"20615"	"20598"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.7"	"1.9"	"38.2"	""	"62.0"	""	"73.8"	""	"83.7"	"81.8"	""	"982"	"99"	"36.000"	"29.000"	"6.70010320065162E-09"	"23"	"0"	"9.534E-09"	"1.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQMSHFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"626.31903"	"1876.94254"	"1876.94246"	"0.04"	"0.00003"	"17/134"	"17"	"134"	"3779298.67578125"	"HCD"	"MS2"	"16.74762"	"24.8"	"100.000"	"62.7201"	"20483"	"20483"	"20465"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.9"	""	"20.8"	""	"38.3"	""	"50.3"	"1.9"	"40.9"	"46.5"	""	"980"	"81"	"36.000"	"29.000"	"3.84765460958936E-07"	"21"	"0"	"3.927E-08"	"1.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQMSHFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.31940"	"1876.94364"	"1876.94246"	"0.63"	"0.00039"	"14/134"	"14"	"134"	"2916722.46124268"	"HCD"	"MS2"	"11.79"	"21.0"	"100.000"	"62.7932"	"20497"	"20497"	"20474"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.3"	""	"23.8"	""	"28.6"	""	"43.1"	""	"34.2"	"39.3"	""	"981"	"62"	"36.000"	"29.000"	"2.94875718235548E-05"	"16"	"0"	"1.082E-06"	"1.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGAAPEEESAYVAGER"	"[R].lGAAPEEESAYVAGER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.65179"	"1877.94083"	"1877.94424"	"-1.81"	"-0.00114"	"10/138"	"10"	"138"	"231165.07989502"	"HCD"	"MS2"	"26.52335"	"9.2"	"100.000"	"66.6401"	"22074"	"22074"	"22045"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.5"	""	"12.7"	""	"16.0"	""	"10.2"	""	"12.9"	"23.1"	""	"964"	"10"	"36.000"	"29.000"	"5.01241519929607"	"13"	"0.00263"	"0.02579"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGEHDFGAAFDGDGDR"	"[K].sGEHDFGAAFDGDGDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.94434"	"1881.81845"	"1881.82010"	"-0.87"	"-0.00055"	"10/148"	"10"	"148"	"968263.099487305"	"HCD"	"MS2"	"0"	"18.2"	"100.000"	"49.2055"	"15014"	"15014"	"14988"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.3"	""	"25.3"	""	"22.7"	""	"33.8"	""	"29.1"	"36.0"	""	"205"	"71"	"30.000"	"23.000"	"8.72416489157435E-07"	"17"	"0"	"2.394E-07"	"1.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGEHDFGAAFDGDGDR"	"[K].sGEHDFGAAFDGDGDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.94482"	"1881.81992"	"1881.82010"	"-0.10"	"-0.00006"	"9/148"	"9"	"148"	"1061832.28753662"	"HCD"	"MS2"	"0"	"19.7"	"100.000"	"49.6047"	"15165"	"15165"	"15137"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.8"	""	"19.8"	""	"24.5"	""	"36.2"	"1.9"	"34.5"	"39.8"	""	"217"	"64"	"30.000"	"23.000"	"4.43026534170971E-06"	"16"	"0"	"3.413E-07"	"1.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFRDGEEAGAYDGPR"	"[K].iFRDGEEAGAYDGPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.98120"	"1881.92905"	"1881.92926"	"-0.11"	"-0.00007"	"9/152"	"9"	"152"	"1331751.0357666"	"HCD"	"MS2"	"14.01081"	"36.6"	"100.000"	"56.5636"	"17998"	"17998"	"17972"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"77.7"	""	"74.4"	""	"72.2"	""	"38.9"	""	"39.5"	"42.9"	""	"885"	"21"	"36.000"	"29.000"	"0.358850268100324"	"14"	"0"	"0.001208"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFRDGEEAGAYDGPR"	"[K].iFRDGEEAGAYDGPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"1"	"3"	"3"	"0.6500"	"0.0000"	"1"	"1"	"1"	"627.98138"	"1881.92960"	"1881.92926"	"0.18"	"0.00011"	"12/152"	"12"	"152"	"1596463.11474609"	"HCD"	"MS2"	"21.798"	"42.7"	"100.000"	"56.4487"	"17965"	"17965"	"17942"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"87.0"	""	"79.0"	""	"71.1"	""	"51.8"	"0.2"	"58.7"	"54.0"	""	"880"	"20"	"36.000"	"29.000"	"0.460736561142395"	"21"	"0"	"0.001482"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEVDGGPTGPPGGAAK"	"[K].dEVDGGPTGPPGGAAk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6AY41"	"Cell cycle control protein 50A OS=Rattus norvegicus OX=10116 GN=Tmem30a PE=1 SV=1"	"Q6AY41"	"Cell cycle control protein 50A OS=Rattus norvegicus OX=10116 GN=Tmem30a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"941.99829"	"1882.98931"	"1882.99108"	"-0.94"	"-0.00089"	"9/134"	"9"	"134"	"110975.852722168"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"47.6827"	"14394"	"14394"	"14365"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.1"	""	"5.4"	""	"6.7"	""	"14.6"	""	"16.2"	"18.0"	""	"1184"	"25"	"37.000"	"30.000"	"0.192451680052177"	"14"	"0.0003538"	"0.006256"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYTEEDLDLVEK"	"[K].aYTEEDLDLVEk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"628.33948"	"1883.00388"	"1883.00500"	"-0.59"	"-0.00037"	"6/104"	"6"	"104"	"360113.25982666"	"HCD"	"MS2"	"13.80127"	"11.8"	"100.000"	"90.8611"	"31751"	"31751"	"31736"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.8"	""	"15.4"	""	"14.7"	""	"19.5"	""	"23.2"	"25.8"	""	"1176"	"16"	"37.000"	"30.000"	"1.6382392471543"	"26"	"0.001036"	"0.01367"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLLQDGEFTMDLR"	"[R].dSLLQDGEFTmDLR.[T]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"628.97827"	"1884.92026"	"1884.92106"	"-0.42"	"-0.00027"	"8/144"	"8"	"144"	"293438.824279785"	"HCD"	"MS2"	"20.86657"	"5.9"	"100.000"	"97.6811"	"34235"	"34235"	"34226"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.1"	""	"8.7"	""	"11.8"	""	"8.1"	""	"9.6"	"10.0"	""	"790"	"21"	"35.000"	"28.000"	"0.332351080949852"	"14"	"0"	"0.002713"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLLQDGEFTMDLR"	"[R].dSLLQDGEFTmDLR.[T]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.8788"	"0.0000"	"1"	"1"	"1"	"628.97852"	"1884.92099"	"1884.92106"	"-0.03"	"-0.00002"	"13/144"	"13"	"144"	"367302.520690918"	"HCD"	"MS2"	"30.52388"	"5.6"	"100.000"	"97.6608"	"34252"	"34252"	"34238"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.0"	""	"7.9"	""	"8.8"	""	"8.0"	""	"11.9"	"10.9"	""	"788"	"33"	"35.000"	"28.000"	"0.0208687396893313"	"19"	"0"	"8.852E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLLQDGEFTMDLR"	"[R].dSLLQDGEFTmDLR.[T]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.9348"	"0.0000"	"1"	"1"	"1"	"628.97864"	"1884.92136"	"1884.92106"	"0.16"	"0.00010"	"15/144"	"15"	"144"	"385199.185668945"	"HCD"	"MS2"	"20.12407"	"6.5"	"100.000"	"97.9419"	"34321"	"34321"	"34318"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.5"	""	"8.5"	""	"10.1"	""	"12.9"	""	"10.6"	"11.6"	""	"796"	"46"	"35.000"	"29.000"	"0.000939470336805869"	"19"	"0"	"2.575E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLLQDGEFTMDLR"	"[R].dSLLQDGEFTmDLR.[T]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"628.97864"	"1884.92136"	"1884.92106"	"0.16"	"0.00010"	"15/144"	"15"	"144"	"443964.619995117"	"HCD"	"MS2"	"5.823743"	"7.1"	"100.000"	"97.9360"	"34347"	"34347"	"34338"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.6"	""	"9.7"	""	"9.1"	""	"13.5"	""	"12.9"	"12.4"	""	"796"	"44"	"35.000"	"29.000"	"0.00174133797852984"	"19"	"0"	"0.0001997"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLLQDGEFTMDLR"	"[R].dSLLQDGEFTmDLR.[T]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"942.96460"	"1884.92192"	"1884.92106"	"0.46"	"0.00043"	"5/144"	"5"	"144"	"81843.3248291016"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"97.9463"	"34322"	"34322"	"34318"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.4"	""	"3.8"	""	"3.1"	""	"6.9"	""	"5.3"	"8.2"	""	"801"	"27"	"36.000"	"29.000"	"0.0780912762203096"	"15"	"0"	"0.002245"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLLQDGEFTMDLR"	"[R].dSLLQDGEFTmDLR.[T]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"942.96472"	"1884.92217"	"1884.92106"	"0.59"	"0.00055"	"7/144"	"7"	"144"	"131067.150756836"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"97.8964"	"34333"	"34333"	"34327"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.2"	""	"7.5"	""	"4.8"	""	"12.8"	""	"12.8"	"8.5"	""	"801"	"29"	"36.000"	"29.000"	"0.0478192235837941"	"15"	"0"	"0.002537"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLLQDGEFTMDLR"	"[R].dSLLQDGEFTmDLR.[T]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"942.96521"	"1884.92314"	"1884.92106"	"1.11"	"0.00104"	"6/144"	"6"	"144"	"90586.452331543"	"HCD"	"MS2"	"0"	"1.3"	"100.000"	"97.6760"	"34233"	"34233"	"34221"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.3"	""	""	""	"2.8"	""	"2.8"	""	"4.0"	""	""	"802"	"21"	"36.000"	"29.000"	"0.327449530914796"	"14"	"0.0004639"	"0.008057"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLLQDGEFTMDLR"	"[R].dSLLQDGEFTmDLR.[T]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"3"	"942.96588"	"1884.92449"	"1884.92106"	"1.82"	"0.00171"	"3/144"	"3"	"144"	"66554.2559814453"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"97.6356"	"34242"	"34242"	"34222"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.6"	""	"3.0"	""	"6.8"	""	"9.2"	""	"4.3"	"7.6"	""	"819"	"9"	"36.000"	"29.000"	"5.42317858662215"	"15"	"0.001374"	"0.0164"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDDAVVQSDMK"	"[R].rFDDAVVQSDmk.[H]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"1"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"629.00092"	"1884.98819"	"1884.98897"	"-0.41"	"-0.00026"	"12/124"	"12"	"124"	"1008892.09881592"	"HCD"	"MS2"	"5.083703"	"37.0"	"100.000"	"50.5306"	"15543"	"15543"	"15518"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"55.0"	""	"35.6"	""	"50.1"	""	"65.8"	"1.3"	"73.6"	"70.0"	""	"1137"	"28"	"37.000"	"30.000"	"0.0943475156878254"	"21"	"0"	"0.001089"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPNEGLSGNPADLER"	"[K].tSPNEGLSGNPADLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"943.47528"	"1885.94328"	"1885.94530"	"-1.07"	"-0.00101"	"7/172"	"7"	"172"	"109744.133239746"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"56.8908"	"18146"	"18146"	"18115"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.0"	""	"4.9"	""	"6.7"	""	"11.0"	""	"11.7"	"11.3"	""	"956"	"10"	"36.000"	"29.000"	"4.46095555780962"	"14"	"0.001374"	"0.01717"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPNEGLSGNPADLER"	"[K].tSPNEGLSGNPADLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"943.47644"	"1885.94560"	"1885.94530"	"0.16"	"0.00015"	"8/172"	"8"	"172"	"106062.713500977"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"57.0724"	"18206"	"18206"	"18176"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.5"	""	"6.7"	""	"6.1"	""	"12.0"	""	"9.3"	"10.0"	""	"967"	"7"	"36.000"	"29.000"	"8.61780134061151"	"13"	"0.001211"	"0.01548"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTITTTSSSSTTVGSAR"	"[R].tTITTTSSSSTTVGSAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6VBQ5"	"Myeloid-associated differentiation marker OS=Rattus norvegicus OX=10116 GN=Myadm PE=1 SV=1"	"Q6VBQ5"	"Myeloid-associated differentiation marker OS=Rattus norvegicus OX=10116 GN=Myadm PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"943.99536"	"1886.98345"	"1886.98683"	"-1.79"	"-0.00169"	"4/156"	"4"	"156"	"71603.2556762695"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"37.6252"	"10303"	"10303"	"10280"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	""	""	"9.7"	""	"10.7"	"14.1"	""	"1050"	"15"	"37.000"	"30.000"	"1.7424459021512"	"20"	"0.0001301"	"0.004055"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQmSHFR.[K]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.8592"	"0.0000"	"1"	"1"	"1"	"631.65033"	"1892.93644"	"1892.93738"	"-0.50"	"-0.00031"	"10/134"	"10"	"134"	"3778926.77508545"	"HCD"	"MS2"	"4.727731"	"34.4"	"100.000"	"45.4383"	"13479"	"13479"	"13461"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.7"	""	"37.0"	""	"38.6"	""	"64.3"	"2.0"	"58.0"	"70.6"	""	"822"	"71"	"36.000"	"29.000"	"3.5714273643667E-06"	"27"	"0"	"1.188E-07"	"1.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQmSHFR.[K]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.8269"	"0.0000"	"1"	"1"	"1"	"631.65039"	"1892.93662"	"1892.93738"	"-0.40"	"-0.00025"	"13/134"	"13"	"134"	"2950071.24749756"	"HCD"	"MS2"	"2.677685"	"41.9"	"100.000"	"45.6203"	"13542"	"13542"	"13531"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.2"	""	"59.7"	""	"50.0"	""	"67.1"	"0.0"	"82.0"	"81.6"	""	"829"	"52"	"36.000"	"29.000"	"0.000250913792585497"	"24"	"0"	"2.306E-06"	"1.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQmSHFR.[K]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"631.65063"	"1892.93735"	"1892.93738"	"-0.01"	"-0.00001"	"9/134"	"9"	"134"	"3212690.21307373"	"HCD"	"MS2"	"19.15503"	"53.0"	"100.000"	"45.1508"	"13362"	"13362"	"13335"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.5"	""	"64.4"	""	"59.4"	""	"99.3"	"0.5"	"102.7"	"109.5"	""	"828"	"60"	"36.000"	"29.000"	"4.06443648410274E-05"	"24"	"0"	"5.49E-06"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQmSHFR.[K]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.8533"	"0.0000"	"1"	"1"	"1"	"631.65076"	"1892.93772"	"1892.93738"	"0.18"	"0.00011"	"10/134"	"10"	"134"	"3558764.61651611"	"HCD"	"MS2"	"16.92606"	"34.1"	"100.000"	"45.3235"	"13421"	"13421"	"13403"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.0"	""	"39.3"	""	"44.4"	""	"75.2"	""	"61.1"	"61.9"	""	"842"	"75"	"36.000"	"29.000"	"1.3405471566467E-06"	"28"	"0"	"2.268E-07"	"1.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGPMEEPQVIEK"	"[R].yGPmEEPQVIEk.[D]"	"N-Term(TMT6plex); M4(Oxidation); K12(TMT6plex)"	"1"	"1"	"P36970"	"Phospholipid hydroperoxide glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx4 PE=1 SV=3"	"P36970"	"Phospholipid hydroperoxide glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx4 PE=1 SV=3"	"0"	"3"	"3"	"0.6562"	"0.0000"	"1"	"1"	"1"	"632.00610"	"1894.00376"	"1894.00322"	"0.28"	"0.00018"	"9/108"	"9"	"108"	"396354.911376953"	"HCD"	"MS2"	"11.10949"	"17.8"	"100.000"	"68.8137"	"22945"	"22945"	"22917"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.4"	""	"19.1"	""	"26.7"	""	"32.1"	""	"34.7"	"31.0"	""	"1235"	"32"	"37.000"	"30.000"	"0.0416521057103467"	"26"	"0"	"0.001016"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFEEAAGSAETLSVER"	"[R].aFEEAAGSAETLSVER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"3"	"3"	"0.6571"	"0.0000"	"1"	"1"	"1"	"632.65558"	"1895.95218"	"1895.95480"	"-1.38"	"-0.00087"	"13/144"	"13"	"144"	"260183.018981934"	"HCD"	"MS2"	"5.633866"	"7.2"	"100.000"	"79.1588"	"27145"	"27145"	"27125"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.4"	""	"7.9"	""	"8.6"	""	"12.5"	""	"12.3"	"13.2"	""	"993"	"35"	"36.000"	"29.000"	"0.0153786868206103"	"27"	"0"	"1.695E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFEEAAGSAETLSVER"	"[R].aFEEAAGSAETLSVER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"3"	"3"	"0.6970"	"0.0000"	"1"	"1"	"1"	"632.65680"	"1895.95584"	"1895.95480"	"0.55"	"0.00035"	"15/144"	"15"	"144"	"264023.140136719"	"HCD"	"MS2"	"6.007398"	"8.1"	"100.000"	"79.0895"	"27113"	"27113"	"27096"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.4"	""	"15.3"	""	"11.1"	""	"12.5"	""	"11.6"	"14.0"	""	"1022"	"33"	"37.000"	"30.000"	"0.0245143792253348"	"25"	"0"	"1.392E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETTEESVKETER"	"[K].eTTEESVkETER.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"1"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"632.67004"	"1895.99558"	"1895.99622"	"-0.34"	"-0.00021"	"13/116"	"13"	"116"	"1773500.75665283"	"HCD"	"MS2"	"63.08453"	"94.6"	"100.000"	"31.7070"	"7908"	"7908"	"7881"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"214.7"	""	"120.8"	""	"116.0"	""	"143.2"	"0.4"	"152.8"	"145.0"	""	"1195"	"11"	"37.000"	"30.000"	"4.90160047737066"	"15"	"0"	"0.0005713"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVHERDEAAYGALR"	"[R].aLVHERDEAAYGALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63798"	"Proteasome activator complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Psme2 PE=2 SV=3"	"Q63798"	"Proteasome activator complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Psme2 PE=2 SV=3"	"1"	"4"	"4"	"0.9259"	"0.0000"	"1"	"1"	"1"	"475.76096"	"1900.02199"	"1900.02382"	"-0.96"	"-0.00046"	"16/136"	"16"	"136"	"3187067.05023193"	"HCD"	"MS2"	"0"	"45.7"	"100.000"	"43.4288"	"12667"	"12667"	"12649"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"93.5"	""	"69.7"	""	"63.8"	""	"66.9"	"0.6"	"67.2"	"69.3"	""	"1259"	"27"	"37.000"	"31.000"	"0.116679815693962"	"16"	"0"	"1.66E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVHERDEAAYGALR"	"[R].aLVHERDEAAYGALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63798"	"Proteasome activator complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Psme2 PE=2 SV=3"	"Q63798"	"Proteasome activator complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Psme2 PE=2 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"475.76111"	"1900.02260"	"1900.02382"	"-0.64"	"-0.00031"	"11/136"	"11"	"136"	"4712860.24139404"	"HCD"	"MS2"	"15.97236"	"56.2"	"100.000"	"43.4708"	"12674"	"12674"	"12650"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"134.9"	""	"85.4"	""	"84.6"	""	"71.3"	"0.1"	"66.6"	"86.1"	""	"1257"	"18"	"37.000"	"30.000"	"1.01462435296545"	"14"	"0"	"1.478E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDGAAPSPSSETPK"	"[K].aEDGAAPSPSSETPk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"951.49573"	"1901.98418"	"1901.98566"	"-0.78"	"-0.00074"	"13/134"	"13"	"134"	"158951.97076416"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"40.5036"	"11467"	"11467"	"11442"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.1"	""	"10.2"	""	"5.4"	""	"19.6"	""	"19.8"	"22.3"	""	"1173"	"43"	"37.000"	"30.000"	"0.00307799575436492"	""	"0"	"0.0003677"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDGAAPSPSSETPK"	"[K].aEDGAAPSPSSETPk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"634.66669"	"1901.98551"	"1901.98566"	"-0.08"	"-0.00005"	"14/134"	"14"	"134"	"3362907.86206055"	"HCD"	"MS2"	"15.57009"	"110.4"	"100.000"	"40.5522"	"11486"	"11486"	"11469"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"127.6"	""	"113.8"	""	"114.6"	""	"212.7"	""	"253.9"	"228.8"	""	"1187"	"37"	"37.000"	"30.000"	"0.0113872989758782"	"19"	"0"	"1.304E-05"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDGAAPSPSSETPK"	"[K].aEDGAAPSPSSETPk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"0"	"2"	"2"	"0.7719"	"0.0000"	"1"	"1"	"1"	"951.49664"	"1901.98601"	"1901.98566"	"0.19"	"0.00018"	"15/134"	"15"	"134"	"191618.266784668"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"40.2962"	"11391"	"11391"	"11368"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.3"	""	"9.0"	""	"10.2"	""	"33.4"	""	"35.9"	"24.2"	""	"1168"	"57"	"37.000"	"30.000"	"0.000120896254769397"	"29"	"0"	"2.102E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDGAAPSPSSETPK"	"[K].aEDGAAPSPSSETPk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"0"	"3"	"3"	"0.8200"	"0.0000"	"1"	"1"	"1"	"634.66699"	"1901.98642"	"1901.98566"	"0.40"	"0.00026"	"17/134"	"17"	"134"	"3399895.00177002"	"HCD"	"MS2"	"26.79778"	"98.3"	"100.000"	"40.3653"	"11419"	"11419"	"11398"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"109.0"	""	"97.1"	""	"106.0"	""	"188.3"	""	"224.0"	"213.2"	""	"1194"	"50"	"37.000"	"30.000"	"0.000651589880859908"	"25"	"0"	"4.32E-06"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEPAPLPYDSRPR"	"[R].fEEPAPLPYDSRPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"635.00128"	"1902.98929"	"1902.99113"	"-0.96"	"-0.00061"	"8/126"	"8"	"126"	"388595.165588379"	"HCD"	"MS2"	"23.24008"	"15.1"	"100.000"	"68.2128"	"22714"	"22714"	"22687"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.2"	""	"18.2"	""	"18.8"	""	"17.8"	""	"50.2"	"22.6"	""	"1118"	"5"	"37.000"	"30.000"	"16.8815301170472"	"13"	"0.0002479"	"0.005042"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEPAPLPYDSRPR"	"[R].fEEPAPLPYDSRPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"635.00128"	"1902.98929"	"1902.99113"	"-0.96"	"-0.00061"	"12/126"	"12"	"126"	"1680930.52746582"	"HCD"	"MS2"	"1.183215"	"30.0"	"100.000"	"67.8922"	"22583"	"22583"	"22562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.1"	""	"48.6"	""	"41.7"	""	"42.7"	""	"55.0"	"58.2"	""	"1118"	"22"	"37.000"	"30.000"	"0.385844050346695"	"19"	"0"	"1.083E-05"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEPAPLPYDSRPR"	"[R].fEEPAPLPYDSRPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"635.00146"	"1902.98984"	"1902.99113"	"-0.68"	"-0.00043"	"13/126"	"13"	"126"	"1569145.16137695"	"HCD"	"MS2"	"0"	"28.7"	"100.000"	"68.0183"	"22620"	"22620"	"22599"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"38.4"	""	"36.3"	""	"31.7"	""	"45.3"	"0.8"	"65.2"	"54.6"	""	"1113"	"23"	"37.000"	"30.000"	"0.305819496301768"	"19"	"0"	"3.31E-05"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEPAPLPYDSRPR"	"[R].fEEPAPLPYDSRPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"635.00195"	"1902.99131"	"1902.99113"	"0.09"	"0.00006"	"11/126"	"11"	"126"	"388394.863586426"	"HCD"	"MS2"	"21.30438"	"13.1"	"100.000"	"68.3410"	"22752"	"22752"	"22726"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.3"	""	"13.3"	""	"18.0"	""	"20.3"	""	"35.0"	"20.6"	""	"1117"	"15"	"37.000"	"30.000"	"1.80311396697651"	"14"	"0"	"0.002393"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGVPGAAGPHVDGELLR"	"[K].eGVPGAAGPHVDGELLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHZ4"	"GRIP1-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Gripap1 PE=1 SV=1"	"Q9JHZ4"	"GRIP1-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Gripap1 PE=1 SV=1"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"635.01221"	"1903.02207"	"1903.02349"	"-0.75"	"-0.00047"	"17/154"	"17"	"154"	"1106251.57183838"	"HCD"	"MS2"	"5.604432"	"21.6"	"100.000"	"64.8379"	"21325"	"21325"	"21303"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.9"	""	"29.1"	""	"29.9"	""	"36.1"	""	"40.2"	"37.0"	""	"1197"	"57"	"37.000"	"30.000"	"0.000114568217112512"	"25"	"0"	"8.219E-08"	"1.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGVPGAAGPHVDGELLR"	"[K].eGVPGAAGPHVDGELLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHZ4"	"GRIP1-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Gripap1 PE=1 SV=1"	"Q9JHZ4"	"GRIP1-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Gripap1 PE=1 SV=1"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"635.01221"	"1903.02207"	"1903.02349"	"-0.75"	"-0.00047"	"15/154"	"15"	"154"	"1223554.284729"	"HCD"	"MS2"	"0"	"23.3"	"100.000"	"64.7805"	"21317"	"21317"	"21294"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.2"	""	"31.4"	""	"33.5"	""	"41.1"	""	"39.9"	"40.5"	""	"1197"	"58"	"37.000"	"30.000"	"9.14248285855487E-05"	"24"	"0"	"1.181E-07"	"1.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGVPGAAGPHVDGELLR"	"[K].eGVPGAAGPHVDGELLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHZ4"	"GRIP1-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Gripap1 PE=1 SV=1"	"Q9JHZ4"	"GRIP1-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Gripap1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"635.01239"	"1903.02262"	"1903.02349"	"-0.46"	"-0.00029"	"14/154"	"14"	"154"	"451352.283569336"	"HCD"	"MS2"	"29.71821"	"20.0"	"100.000"	"65.1431"	"21448"	"21448"	"21425"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.2"	""	"28.1"	""	"26.9"	""	"30.0"	""	"41.8"	"39.0"	""	"1192"	"33"	"37.000"	"30.000"	"0.0270549203523521"	"15"	"0"	"3.187E-05"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGVPGAAGPHVDGELLR"	"[K].eGVPGAAGPHVDGELLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHZ4"	"GRIP1-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Gripap1 PE=1 SV=1"	"Q9JHZ4"	"GRIP1-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Gripap1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"635.01263"	"1903.02335"	"1903.02349"	"-0.07"	"-0.00005"	"15/154"	"15"	"154"	"468727.213134766"	"HCD"	"MS2"	"19.04071"	"18.9"	"100.000"	"65.0923"	"21443"	"21443"	"21421"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.4"	""	"25.8"	""	"27.4"	""	"34.6"	"2.0"	"32.8"	"32.9"	""	"1200"	"28"	"37.000"	"30.000"	"0.0937888585584572"	"14"	"0"	"0.0004381"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAPESQEDEEER"	"[R].kAPESQEDEEER.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"1"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"635.65808"	"1904.95969"	"1904.96017"	"-0.25"	"-0.00016"	"18/124"	"18"	"124"	"908155.890075684"	"HCD"	"MS2"	"14.15186"	"53.2"	"100.000"	"23.3353"	"4509"	"4509"	"4479"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"61.6"	""	"51.7"	""	"44.3"	""	"103.1"	""	"139.8"	"110.1"	""	"1017"	"13"	"37.000"	"30.000"	"2.78798836662254"	"16"	"0.0006732"	"0.009084"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDEQMLNVQNK"	"[K].eVDEQMLNVQNk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"4"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"635.67590"	"1905.01316"	"1905.01518"	"-1.06"	"-0.00068"	"11/108"	"11"	"108"	"413931.688232422"	"HCD"	"MS2"	"13.60201"	"13.5"	"100.000"	"74.5788"	"25292"	"25292"	"25277"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.4"	""	"12.6"	""	"12.9"	""	"21.1"	""	"30.8"	"29.9"	""	"1228"	"31"	"37.000"	"30.000"	"0.0500228430388795"	"22"	"0.0008629"	"0.01013"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDEQMLNVQNK"	"[K].eVDEQMLNVQNk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"4"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"953.01068"	"1905.01409"	"1905.01518"	"-0.58"	"-0.00055"	"6/108"	"6"	"108"	"92365.8374633789"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"74.2708"	"25181"	"25181"	"25153"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.6"	""	"6.8"	""	"16.4"	""	"8.9"	""	"19.3"	"17.4"	""	"1216"	"38"	"37.000"	"30.000"	"0.009034488705105"	"19"	"0"	"0.001147"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDEQMLNVQNK"	"[K].eVDEQMLNVQNk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"4"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"635.67633"	"1905.01444"	"1905.01518"	"-0.39"	"-0.00025"	"13/108"	"13"	"108"	"815577.92956543"	"HCD"	"MS2"	"8.343001"	"24.5"	"100.000"	"74.1417"	"25128"	"25128"	"25105"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"42.0"	""	"31.0"	""	"28.9"	""	"34.8"	""	"49.5"	"47.3"	""	"1201"	"51"	"37.000"	"30.000"	"0.000449275785056948"	"24"	"0"	"0.0003085"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDEQMLNVQNK"	"[K].eVDEQMLNVQNk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"4"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"953.01105"	"1905.01482"	"1905.01518"	"-0.19"	"-0.00018"	"6/108"	"6"	"108"	"83069.0082397461"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"74.3874"	"25215"	"25215"	"25185"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.0"	""	"8.6"	""	"8.1"	""	"8.1"	""	"13.7"	"14.5"	""	"1201"	"19"	"37.000"	"30.000"	"0.768268473146593"	"18"	"0.0002479"	"0.005209"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDEQMLNVQNK"	"[K].eVDEQMLNVQNk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"4"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"635.67651"	"1905.01499"	"1905.01518"	"-0.10"	"-0.00007"	"14/108"	"14"	"108"	"670226.834228516"	"HCD"	"MS2"	"15.5505"	"22.2"	"100.000"	"74.2652"	"25165"	"25165"	"25142"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.8"	""	"26.6"	""	"24.7"	""	"31.2"	""	"49.3"	"42.7"	""	"1222"	"39"	"37.000"	"30.000"	"0.00772753908304874"	"22"	"0"	"0.0003952"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLMESPPDYSTGPR"	"[K].eVLMESPPDYSTGPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"953.97321"	"1906.93913"	"1906.94179"	"-1.39"	"-0.00133"	"9/134"	"9"	"134"	"117775.381164551"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"75.7593"	"25776"	"25776"	"25748"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.5"	""	"8.2"	""	"12.3"	""	"3.5"	""	"8.7"	"6.9"	""	"839"	"28"	"36.000"	"29.000"	"0.0680349335842072"	"25"	"0"	"0.001393"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLMESPPDYSTGPR"	"[K].eVLMESPPDYSTGPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"953.97327"	"1906.93926"	"1906.94179"	"-1.33"	"-0.00127"	"6/134"	"6"	"134"	"118453.501159668"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"75.8941"	"25821"	"25821"	"25791"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.2"	""	"9.0"	""	"10.9"	""	"7.4"	""	"6.3"	"9.7"	""	"839"	"19"	"36.000"	"29.000"	"0.518479948329973"	"24"	"0.0006732"	"0.008861"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLMESPPDYSTGPR"	"[K].eVLMESPPDYSTGPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"953.97394"	"1906.94060"	"1906.94179"	"-0.63"	"-0.00060"	"13/134"	"13"	"134"	"185905.660583496"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"76.0711"	"25902"	"25902"	"25886"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.8"	""	"10.5"	""	"11.6"	""	"5.7"	""	"11.9"	"11.9"	""	"842"	"41"	"36.000"	"29.000"	"0.0035504393301876"	"28"	"0"	"4.452E-05"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLMESPPDYSTGPR"	"[K].eVLMESPPDYSTGPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"953.97424"	"1906.94121"	"1906.94179"	"-0.31"	"-0.00029"	"11/134"	"11"	"134"	"218652.317199707"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"76.1806"	"25937"	"25937"	"25919"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.3"	""	"13.0"	""	"12.8"	""	"6.4"	""	"13.9"	"14.8"	""	"845"	"56"	"36.000"	"29.000"	"0.00010323494085132"	""	"0"	"2.215E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLHPSPEEEKR"	"[K].dLLHPSPEEEkR.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q71TY3"	"40S ribosomal protein S27 OS=Rattus norvegicus OX=10116 GN=Rps27 PE=1 SV=3"	"Q71TY3"	"40S ribosomal protein S27 OS=Rattus norvegicus OX=10116 GN=Rps27 PE=1 SV=3"	"1"	"4"	"4"	"0.4615"	"0.0000"	"1"	"1"	"1"	"477.77014"	"1908.05874"	"1908.05910"	"-0.19"	"-0.00009"	"9/108"	"9"	"108"	"1685239.52227783"	"HCD"	"MS2"	"17.99366"	"48.8"	"100.000"	"42.8934"	"12449"	"12449"	"12419"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"68.9"	""	"60.7"	""	"58.9"	""	"87.5"	""	"84.0"	"106.8"	""	"1077"	"13"	"37.000"	"30.000"	"2.60127164898418"	"20"	"0.0008629"	"0.01089"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DENATLDGGDVLFTGR"	"[K].dENATLDGGDVLFTGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"636.98810"	"1908.94974"	"1908.95005"	"-0.16"	"-0.00010"	"13/172"	"13"	"172"	"191327.085754395"	"HCD"	"MS2"	"13.58342"	"4.7"	"100.000"	"89.3287"	"31157"	"31157"	"31147"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.7"	""	"5.6"	""	"6.2"	""	"7.5"	""	"9.3"	"10.3"	""	"976"	"37"	"36.000"	"29.000"	"0.0108497522663788"	"23"	"0"	"0.0004044"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DENATLDGGDVLFTGR"	"[K].dENATLDGGDVLFTGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"954.97906"	"1908.95085"	"1908.95005"	"0.42"	"0.00040"	"5/172"	"5"	"172"	"48948.8379516602"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"89.2962"	"31145"	"31145"	"31133"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.3"	"1.8"	"2.4"	""	"1.9"	""	"4.4"	""	"8.8"	"7.7"	""	"980"	"9"	"36.000"	"29.000"	"6.04221368282166"	"17"	"0.001211"	"0.01427"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFDEMLPGTHFQR"	"[R].tSFDEmLPGTHFQR.[V]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"3"	"3"	"0.5238"	"0.0000"	"1"	"1"	"1"	"637.64685"	"1910.92600"	"1910.92681"	"-0.43"	"-0.00027"	"12/124"	"12"	"124"	"454069.606872559"	"HCD"	"MS2"	"16.93218"	"16.9"	"100.000"	"66.1091"	"21842"	"21842"	"21816"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.4"	""	"17.7"	""	"20.2"	""	"30.6"	""	"34.4"	"32.3"	""	"785"	"21"	"35.000"	"28.000"	"0.329488044708864"	"24"	"0"	"0.0007441"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFDEMLPGTHFQR"	"[R].tSFDEmLPGTHFQR.[V]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"3"	"3"	"0.9250"	"0.0000"	"1"	"1"	"1"	"637.64703"	"1910.92655"	"1910.92681"	"-0.14"	"-0.00009"	"14/124"	"14"	"124"	"488041.398620605"	"HCD"	"MS2"	"32.48886"	"11.0"	"100.000"	"65.9921"	"21810"	"21810"	"21780"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.0"	""	"13.3"	""	"10.1"	""	"20.9"	""	"22.9"	"22.3"	""	"783"	"40"	"35.000"	"28.000"	"0.00419499808000522"	"18"	"0"	"4.789E-05"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVLEDGTLHVTEGSGR"	"[K].iVLEDGTLHVTEGSGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"638.01556"	"1912.03214"	"1912.03372"	"-0.83"	"-0.00053"	"16/140"	"16"	"140"	"1786403.64324951"	"HCD"	"MS2"	"4.975449"	"22.5"	"100.000"	"75.6927"	"25749"	"25749"	"25735"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.5"	""	"24.0"	""	"22.4"	""	"51.0"	"0.4"	"48.5"	"47.8"	""	"1144"	"68"	"37.000"	"30.000"	"8.51914536450644E-06"	""	"0"	"8.168E-08"	"1.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVLEDGTLHVTEGSGR"	"[K].iVLEDGTLHVTEGSGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.5333"	"0.0000"	"1"	"1"	"1"	"638.01593"	"1912.03324"	"1912.03372"	"-0.25"	"-0.00016"	"14/140"	"14"	"140"	"1115043.78344727"	"HCD"	"MS2"	"0"	"15.9"	"100.000"	"75.4017"	"25631"	"25631"	"25614"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.6"	""	"13.8"	""	"18.0"	""	"31.6"	""	"29.9"	"35.6"	""	"1135"	"60"	"37.000"	"30.000"	"5.58426302519443E-05"	""	"0"	"2.834E-07"	"1.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVLEDGTLHVTEGSGR"	"[K].iVLEDGTLHVTEGSGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"638.01593"	"1912.03324"	"1912.03372"	"-0.25"	"-0.00016"	"14/140"	"14"	"140"	"1358485.62316895"	"HCD"	"MS2"	"6.896267"	"19.1"	"100.000"	"75.5435"	"25678"	"25678"	"25659"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.5"	""	"13.4"	""	"24.4"	""	"35.8"	""	"40.0"	"42.6"	""	"1135"	"60"	"37.000"	"30.000"	"5.16375782218803E-05"	""	"0"	"1.143E-06"	"1.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLNQLGTPQDTPELR"	"[R].tLNQLGTPQDTPELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"O70257"	"Syntaxin-7 OS=Rattus norvegicus OX=10116 GN=Stx7 PE=1 SV=4"	"O70257"	"Syntaxin-7 OS=Rattus norvegicus OX=10116 GN=Stx7 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"956.52051"	"1912.03374"	"1912.03372"	"0.01"	"0.00001"	"4/160"	"4"	"160"	"58752.9410400391"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"75.5273"	"25672"	"25672"	"25643"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.7"	""	"2.7"	""	"1.9"	""	"4.2"	""	"4.0"	"4.3"	""	"1128"	"12"	"37.000"	"30.000"	"3.29063038810392"	"13"	"0.0002479"	"0.005318"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTGPNSPDTANDGFVR"	"[K].hTGPNSPDTANDGFVR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"Q8VHV7; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2;Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q8VHV7; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.64783"	"1913.92893"	"1913.93032"	"-0.73"	"-0.00046"	"9/162"	"9"	"162"	"5625435.62072754"	"HCD"	"MS2"	"18.37369"	"68.0"	"100.000"	"33.2003"	"8507"	"8507"	"8484"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"103.4"	""	"87.4"	""	"66.7"	""	"110.5"	"0.4"	"151.7"	"125.4"	""	"776"	"68"	"35.000"	"28.000"	"6.89972411095101E-06"	"17"	"0"	"2.842E-07"	"1.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTGPNSPDTANDGFVR"	"[K].hTGPNSPDTANDGFVR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"Q8VHV7; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2;Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q8VHV7; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"3"	"3"	"0.9219"	"0.0000"	"1"	"1"	"1"	"638.64844"	"1913.93076"	"1913.93032"	"0.23"	"0.00015"	"10/162"	"10"	"162"	"4090465.84637451"	"HCD"	"MS2"	"2.104998"	"68.3"	"100.000"	"33.1703"	"8502"	"8502"	"8475"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"107.3"	""	"71.4"	""	"74.3"	""	"130.8"	"1.2"	"140.6"	"122.5"	""	"769"	"64"	"35.000"	"28.000"	"1.54133252927698E-05"	"21"	"0"	"7.412E-07"	"1.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IINDYYPEEDGKTK"	"[K].iINDYYPEEDGKTK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"1"	"3"	"3"	"0.0435"	"0.0000"	"1"	"1"	"1"	"638.66748"	"1913.98789"	"1913.96939"	"9.67"	"0.00617"	"11/144"	"11"	"144"	"374595.327636719"	"HCD"	"MS2"	"15.42499"	"13.2"	"100.000"	"82.9875"	"28679"	"28679"	"28663"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.1"	""	"15.8"	""	"14.1"	""	"23.9"	""	"25.6"	"28.1"	""	"1048"	"46"	"37.000"	"30.000"	"0.00119215105372456"	""	"0.00736"	"0.08757"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"IINDYYPEEDGK"	"[K].iINDYYPEEDGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"0"	"3"	"3"	""	"0.0435"	"2"	"2"	"2"	"638.66748"	"1913.98789"	"1913.98968"	"-0.94"	"-0.00060"	"11/118"	"11"	"118"	"374595.327636719"	"HCD"	"MS2"	"15.42499"	"13.2"	"100.000"	"82.9875"	"28679"	"28679"	"28663"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.1"	""	"15.8"	""	"14.1"	""	"23.9"	""	"25.6"	"28.1"	""	"1048"	"44"	"37.000"	"30.000"	"0.00222500651507868"	""	"0"	"0.0005631"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINDYYPEEDGKTK"	"[K].iINDYYPEEDGKTK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"1"	"3"	"3"	"0.0612"	"0.0000"	"1"	"1"	"1"	"638.66760"	"1913.98825"	"1913.96939"	"9.86"	"0.00629"	"12/144"	"12"	"144"	"429265.806274414"	"HCD"	"MS2"	"27.23777"	"13.5"	"100.000"	"83.0367"	"28700"	"28700"	"28678"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.7"	""	"15.5"	""	"14.6"	""	"28.6"	""	"26.9"	"24.2"	""	"1046"	"49"	"37.000"	"30.000"	"0.000712035568929692"	"27"	"0.002871"	"0.0269"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQPLEEGESEEK"	"[K].aLQPLEEGESEEk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"959.01294"	"1917.01860"	"1917.02171"	"-1.62"	"-0.00155"	"5/128"	"5"	"128"	"92193.7682495117"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"67.1518"	"22283"	"22283"	"22252"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.1"	""	"3.9"	""	"3.4"	""	"7.5"	""	"6.2"	"8.5"	""	"1200"	"3"	"37.000"	"30.000"	"31.3437713399471"	"13"	"0.008641"	"0.1077"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQPLEEGESEEK"	"[K].aLQPLEEGESEEk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.8864"	"0.0000"	"1"	"1"	"1"	"639.67847"	"1917.02085"	"1917.02171"	"-0.45"	"-0.00029"	"12/128"	"12"	"128"	"624535.340942383"	"HCD"	"MS2"	"4.765697"	"23.5"	"100.000"	"67.1464"	"22265"	"22265"	"22242"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.9"	""	"23.0"	""	"28.3"	""	"38.2"	""	"52.0"	"41.7"	""	"1194"	"44"	"37.000"	"30.000"	"0.00250596113442631"	"20"	"0"	"0.0005952"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQPLEEGESEEK"	"[K].aLQPLEEGESEEk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"639.67889"	"1917.02213"	"1917.02171"	"0.22"	"0.00014"	"9/128"	"9"	"128"	"483629.866455078"	"HCD"	"MS2"	"0"	"19.8"	"100.000"	"66.9857"	"22215"	"22215"	"22188"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.8"	""	"22.6"	""	"22.4"	""	"32.5"	"1.1"	"38.9"	"37.0"	""	"1220"	"28"	"37.000"	"30.000"	"0.0982493837458745"	"18"	"0"	"0.001266"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEVERDNLAEDIMR"	"[R].vEVERDNLAEDIMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"640.00043"	"1917.98673"	"1917.99014"	"-1.78"	"-0.00114"	"13/140"	"13"	"140"	"770687.936462402"	"HCD"	"MS2"	"28.15158"	"24.2"	"100.000"	"78.5060"	"26883"	"26883"	"26863"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"71.5"	""	"40.9"	""	"43.3"	""	"20.5"	"1.2"	"23.0"	"26.2"	""	"1059"	"36"	"37.000"	"30.000"	"0.0136730677094102"	"15"	"0"	"2.285E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEVERDNLAEDIMR"	"[R].vEVERDNLAEDIMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"640.00128"	"1917.98929"	"1917.99014"	"-0.44"	"-0.00028"	"14/140"	"14"	"140"	"723142.166931152"	"HCD"	"MS2"	"29.67053"	"20.0"	"100.000"	"78.5014"	"26876"	"26876"	"26855"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.8"	""	"35.1"	""	"35.0"	""	"20.1"	""	"17.3"	"23.4"	""	"1080"	"45"	"37.000"	"30.000"	"0.00180881337145227"	"15"	"0"	"8.387E-06"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEVERDNLAEDIMR"	"[R].vEVERDNLAEDIMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"640.00140"	"1917.98966"	"1917.99014"	"-0.25"	"-0.00016"	"10/140"	"10"	"140"	"277954.947875977"	"HCD"	"MS2"	"2.902992"	"12.3"	"100.000"	"78.8289"	"27008"	"27008"	"26985"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.8"	""	"26.8"	""	"16.7"	""	"13.6"	""	"18.2"	"17.9"	""	"1089"	"22"	"37.000"	"30.000"	"0.381063966823238"	"14"	"0.001211"	"0.01409"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STAGDTHLGGEDFDNR"	"[K].sTAGDTHLGGEDFDNR.[M]"	"N-Term(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"640.96747"	"1920.88785"	"1920.88851"	"-0.34"	"-0.00022"	"19/148"	"19"	"148"	"7120587.46533203"	"HCD"	"MS2"	"11.96501"	"107.9"	"100.000"	"40.2302"	"11355"	"11355"	"11336"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"222.0"	""	"122.7"	""	"140.2"	""	"160.0"	""	"188.4"	"188.9"	""	"466"	"64"	"33.000"	"26.000"	"9.69071722451071E-06"	"16"	"0"	"6.533E-08"	"1.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STAGDTHLGGEDFDNR"	"[K].sTAGDTHLGGEDFDNR.[M]"	"N-Term(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"640.96790"	"1920.88913"	"1920.88851"	"0.32"	"0.00021"	"13/148"	"13"	"148"	"6973445.20129395"	"HCD"	"MS2"	"19.11995"	"112.8"	"100.000"	"39.9997"	"11270"	"11270"	"11252"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"202.1"	""	"126.5"	""	"142.5"	""	"170.1"	""	"221.0"	"208.1"	""	"470"	"55"	"33.000"	"26.000"	"6.63846794105191E-05"	"16"	"0"	"6.032E-08"	"1.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLMESPPDYSTGPR"	"[K].eVLmESPPDYSTGPR.[S]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"961.97009"	"1922.93291"	"1922.93671"	"-1.98"	"-0.00190"	"10/134"	"10"	"134"	"99013.682800293"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"63.4366"	"20774"	"20774"	"20747"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.1"	""	"4.9"	""	"2.5"	""	"8.8"	""	"6.1"	"5.9"	""	"801"	"23"	"36.000"	"29.000"	"0.204928575133893"	"14"	"0.001546"	"0.01945"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLMESPPDYSTGPR"	"[K].eVLmESPPDYSTGPR.[S]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"961.97125"	"1922.93523"	"1922.93671"	"-0.77"	"-0.00074"	"9/134"	"9"	"134"	"106610.293579102"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"63.7292"	"20893"	"20893"	"20872"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.8"	""	"5.0"	""	"4.3"	""	"6.8"	""	"6.9"	"8.2"	""	"811"	"18"	"36.000"	"29.000"	"0.71612833628824"	"14"	"0.004022"	"0.04301"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLMESPPDYSTGPR"	"[K].eVLmESPPDYSTGPR.[S]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"961.97205"	"1922.93682"	"1922.93671"	"0.06"	"0.00005"	"5/134"	"5"	"134"	"107628.480957031"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"63.6662"	"20853"	"20853"	"20827"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.2"	""	"7.4"	""	"6.6"	""	"10.3"	""	"10.0"	"2.7"	""	"817"	"23"	"36.000"	"29.000"	"0.196875675329864"	"22"	"0.003507"	"0.03604"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLMESPPDYSTGPR"	"[K].eVLmESPPDYSTGPR.[S]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"641.65057"	"1922.93717"	"1922.93671"	"0.24"	"0.00015"	"14/134"	"14"	"134"	"431528.798706055"	"HCD"	"MS2"	"40.72673"	"14.9"	"100.000"	"63.7707"	"20910"	"20910"	"20885"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.1"	""	"17.9"	""	"23.6"	""	"22.3"	"1.6"	"28.6"	"27.0"	""	"817"	"42"	"36.000"	"29.000"	"0.00257746075220159"	"16"	"0"	"9.901E-06"	"0.904"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLMESPPDYSTGPR"	"[K].eVLmESPPDYSTGPR.[S]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"641.65070"	"1922.93753"	"1922.93671"	"0.43"	"0.00027"	"15/134"	"15"	"134"	"748539.063842773"	"HCD"	"MS2"	"7.225997"	"18.5"	"100.000"	"63.6985"	"20866"	"20866"	"20843"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.7"	""	"22.0"	""	"27.3"	""	"27.2"	"1.0"	"34.2"	"37.8"	""	"821"	"30"	"36.000"	"29.000"	"0.0389325779185018"	"15"	"0"	"4.011E-05"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQEQLASEMAELTAR"	"[K].tQEQLASEmAELTAR.[V]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.5455"	"0.0000"	"1"	"1"	"1"	"641.66010"	"1922.96573"	"1922.96907"	"-1.74"	"-0.00111"	"17/162"	"17"	"162"	"1156789.85083008"	"HCD"	"MS2"	"24.41406"	"34.8"	"100.000"	"61.5128"	"19997"	"19997"	"19969"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.4"	""	"44.7"	""	"48.9"	""	"51.8"	""	"70.4"	"66.2"	""	"1046"	"33"	"37.000"	"30.000"	"0.0275741217524136"	"29"	"0"	"5.715E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQEQLASEMAELTAR"	"[K].tQEQLASEmAELTAR.[V]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.5625"	"0.0000"	"1"	"1"	"1"	"641.66058"	"1922.96720"	"1922.96907"	"-0.97"	"-0.00062"	"14/162"	"14"	"162"	"1189637.69458008"	"HCD"	"MS2"	"26.06178"	"37.3"	"100.000"	"61.6641"	"20043"	"20043"	"20017"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"52.3"	""	"56.7"	""	"49.5"	""	"55.0"	""	"66.8"	"76.1"	""	"1060"	"32"	"37.000"	"30.000"	"0.0343776249780566"	"29"	"0"	"3.643E-05"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQEQLASEMAELTAR"	"[K].tQEQLASEmAELTAR.[V]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"641.66132"	"1922.96939"	"1922.96907"	"0.17"	"0.00011"	"15/162"	"15"	"162"	"919320.367858887"	"HCD"	"MS2"	"61.7287"	"44.6"	"100.000"	"63.1786"	"20669"	"20669"	"20649"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"95.6"	""	"54.8"	""	"60.2"	""	"56.4"	""	"85.0"	"72.2"	""	"1071"	"27"	"37.000"	"30.000"	"0.115547213110125"	"21"	"0"	"2.68E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPEIYTEPEVFK"	"[K].dPEIYTEPEVFk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"642.34985"	"1925.03501"	"1925.03082"	"2.18"	"0.00140"	"10/104"	"10"	"104"	"297091.294250488"	"HCD"	"MS2"	"12.97399"	"8.9"	"100.000"	"96.2679"	"33771"	"33771"	"33761"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.4"	""	"10.4"	""	"10.0"	""	"14.1"	""	"19.7"	"23.8"	""	"1168"	"32"	"37.000"	"30.000"	"0.0371888584210223"	"19"	"0.003581"	"0.03715"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TATPQQAQEVHEK"	"[K].tATPQQAQEVHEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"642.35327"	"1925.04526"	"1925.04926"	"-2.08"	"-0.00133"	"13/134"	"13"	"134"	"811717.274475098"	"HCD"	"MS2"	"44.19802"	"31.0"	"100.000"	"30.7487"	"7521"	"7521"	"7503"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.2"	""	"28.2"	""	"31.2"	""	"60.8"	"1.5"	"63.3"	"61.9"	""	"1122"	"35"	"37.000"	"30.000"	"0.0191409223419902"	"16"	"0"	"8.461E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TATPQQAQEVHEK"	"[K].tATPQQAQEVHEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"642.35425"	"1925.04819"	"1925.04926"	"-0.56"	"-0.00036"	"11/134"	"11"	"134"	"619628.296325684"	"HCD"	"MS2"	"34.56565"	"29.2"	"100.000"	"31.0542"	"7642"	"7642"	"7624"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.2"	""	"28.2"	""	"30.8"	""	"51.7"	"1.0"	"68.8"	"52.2"	""	"1108"	"34"	"37.000"	"30.000"	"0.0208693904637086"	"17"	"0"	"0.0002042"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TATPQQAQEVHEK"	"[K].tATPQQAQEVHEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"642.35443"	"1925.04874"	"1925.04926"	"-0.27"	"-0.00017"	"13/134"	"13"	"134"	"1439135.62780762"	"HCD"	"MS2"	"0"	"44.5"	"100.000"	"30.8340"	"7543"	"7543"	"7525"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.2"	""	"44.8"	""	"48.7"	""	"79.1"	""	"87.1"	"89.9"	""	"1107"	"43"	"37.000"	"30.000"	"0.00279973950418724"	"19"	"0"	"3.616E-05"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGYIGEFEIIDDHR"	"[K].hGYIGEFEIIDDHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"4"	"4"	"0.9474"	"0.0000"	"1"	"1"	"1"	"483.24570"	"1929.96096"	"1929.96564"	"-2.43"	"-0.00117"	"15/116"	"15"	"116"	"831449.124755859"	"HCD"	"MS2"	"8.452715"	"9.8"	"100.000"	"70.9257"	"23820"	"23820"	"23793"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.2"	""	"14.1"	""	"17.0"	""	"17.3"	""	"14.5"	"16.2"	""	"900"	"38"	"36.000"	"29.000"	"0.00741673076186478"	"17"	"0"	"1.757E-06"	"1.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGYIGEFEIIDDHR"	"[K].hGYIGEFEIIDDHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"4"	"4"	"0.9630"	"0.0000"	"1"	"1"	"1"	"483.24677"	"1929.96523"	"1929.96564"	"-0.21"	"-0.00010"	"13/116"	"13"	"116"	"929137.347229004"	"HCD"	"MS2"	"0"	"12.1"	"100.000"	"70.9967"	"23835"	"23835"	"23813"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.8"	""	"13.9"	""	"18.8"	""	"21.0"	""	"22.0"	"20.4"	""	"925"	"54"	"36.000"	"29.000"	"0.000168698700453093"	"18"	"0"	"2.096E-07"	"1.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGYIGEFEIIDDHR"	"[K].hGYIGEFEIIDDHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"483.24698"	"1929.96609"	"1929.96564"	"0.23"	"0.00011"	"12/116"	"12"	"116"	"325882.319885254"	"HCD"	"MS2"	"6.256414"	"8.0"	"100.000"	"71.3509"	"23980"	"23980"	"23955"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.6"	""	"12.8"	""	"12.2"	""	"14.1"	""	"11.2"	"11.9"	""	"927"	"26"	"36.000"	"29.000"	"0.126197205629411"	"14"	"0"	"6.022E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFQSTDVAEEVYTR"	"[K].rFQSTDVAEEVYTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"1"	"3"	"3"	"0.8387"	"0.0000"	"1"	"1"	"1"	"643.99994"	"1929.98526"	"1929.98677"	"-0.78"	"-0.00050"	"9/148"	"9"	"148"	"1712646.6729126"	"HCD"	"MS2"	"9.771687"	"37.0"	"100.000"	"56.9553"	"18172"	"18172"	"18147"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.8"	""	"49.9"	""	"52.2"	""	"60.6"	""	"57.7"	"66.1"	""	"983"	"31"	"36.000"	"29.000"	"0.0363515992691124"	"19"	"0"	"0.0002387"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFQSTDVAEEVYTR"	"[K].rFQSTDVAEEVYTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"1"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"644.00037"	"1929.98655"	"1929.98677"	"-0.12"	"-0.00008"	"11/148"	"11"	"148"	"1419238.94714355"	"HCD"	"MS2"	"3.415143"	"33.0"	"100.000"	"57.0978"	"18216"	"18216"	"18192"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.8"	""	"41.3"	""	"41.2"	""	"61.5"	"0.3"	"53.4"	"54.7"	""	"988"	"42"	"36.000"	"29.000"	"0.00327889076778543"	"18"	"0"	"5.876E-05"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEEAPSIFLDPETR"	"[K].vVEEAPSIFLDPETR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"644.33807"	"1930.99967"	"1931.03232"	"-16.91"	"-0.01089"	"12/134"	"12"	"134"	"325977.516662598"	"HCD"	"MS2"	"37.09721"	"3.8"	"100.000"	"106.7226"	"37175"	"37175"	"37162"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.8"	""	"6.3"	""	"6.5"	""	"5.3"	""	"8.4"	"5.2"	""	"1094"	"31"	"37.000"	"30.000"	"0.0487514263159159"	"18"	"0.0003538"	"0.006551"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEEAPSIFLDPETR"	"[K].vVEEAPSIFLDPETR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"644.35150"	"1931.03995"	"1931.03232"	"3.95"	"0.00254"	"8/134"	"8"	"134"	"313850.45300293"	"HCD"	"MS2"	"28.36857"	"3.1"	"100.000"	"106.7580"	"37119"	"37119"	"37110"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.9"	""	"5.3"	""	"1.5"	""	"3.6"	""	"3.7"	"10.9"	""	"1191"	"35"	"37.000"	"30.000"	"0.0199013146335551"	"17"	"0"	"0.0005053"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEEMETVIPVDIMR"	"[K].gAEEMETVIPVDImR.[R]"	"N-Term(TMT6plex); M14(Oxidation)"	"1"	"1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"645.66455"	"1934.97910"	"1934.97647"	"1.36"	"0.00088"	"5/130"	"5"	"130"	"110792.661193848"	"HCD"	"MS2"	"12.24786"	"1.5"	"100.000"	"97.7028"	"34268"	"34268"	"34258"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.7"	""	"2.2"	""	""	""	"4.3"	""	"3.7"	""	""	"1000"	"23"	"36.000"	"30.000"	"0.273507981446986"	"16"	"0.0006732"	"0.008575"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPDGEEGYPGELK"	"[R].vSPDGEEGYPGELk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"645.67450"	"1935.00895"	"1935.01114"	"-1.14"	"-0.00073"	"13/124"	"13"	"124"	"774125.794799805"	"HCD"	"MS2"	"8.538346"	"22.9"	"100.000"	"71.8557"	"24185"	"24185"	"24163"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.2"	""	"29.8"	""	"28.3"	""	"32.6"	""	"42.2"	"38.6"	""	"1148"	"38"	"37.000"	"30.000"	"0.00943869369125371"	"17"	"0"	"0.0007311"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPDGEEGYPGELK"	"[R].vSPDGEEGYPGELk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"968.00818"	"1935.00908"	"1935.01114"	"-1.07"	"-0.00103"	"7/124"	"7"	"124"	"111355.448181152"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"71.6950"	"24134"	"24134"	"24106"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.6"	""	"12.2"	""	"8.6"	""	"10.4"	""	"12.4"	"14.5"	""	"1146"	"12"	"37.000"	"30.000"	"3.22964376788271"	"13"	"0.002937"	"0.02809"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPDGEEGYPGELK"	"[R].vSPDGEEGYPGELk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"0"	"3"	"3"	"0.8974"	"0.0000"	"1"	"1"	"1"	"645.67474"	"1935.00968"	"1935.01114"	"-0.76"	"-0.00049"	"12/124"	"12"	"124"	"1070783.62103271"	"HCD"	"MS2"	"12.89362"	"33.1"	"100.000"	"71.7942"	"24173"	"24173"	"24157"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"62.7"	""	"38.9"	""	"48.4"	""	"61.2"	"1.3"	"47.6"	"52.5"	""	"1141"	"39"	"37.000"	"30.000"	"0.00750335766765671"	"19"	"0"	"7.462E-06"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPDGEEGYPGELK"	"[R].vSPDGEEGYPGELk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"968.00989"	"1935.01250"	"1935.01114"	"0.70"	"0.00068"	"9/124"	"9"	"124"	"101354.995483398"	"HCD"	"MS2"	"0"	"7.2"	"100.000"	"71.8257"	"24173"	"24173"	"24152"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.1"	""	"8.2"	""	"10.4"	""	"9.6"	""	"13.0"	"10.7"	""	"1177"	"31"	"37.000"	"30.000"	"0.0425350029419877"	"19"	"0.002056"	"0.02277"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPPPKDPVIETIR"	"[K].dPPPkDPVIETIR.[N]"	"N-Term(TMT6plex); K5(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"645.71466"	"1935.12943"	"1935.13153"	"-1.09"	"-0.00070"	"8/132"	"8"	"132"	"2554906.86279297"	"HCD"	"MS2"	"3.572604"	"90.3"	"100.000"	"63.3766"	"20749"	"20749"	"20731"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"158.7"	""	"123.1"	""	"112.1"	""	"179.5"	""	"147.9"	"131.9"	""	"837"	"7"	"36.000"	"29.000"	"8.33096792366137"	"13"	"0.005254"	"0.0594"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPPPKDPVIETIR"	"[K].dPPPkDPVIETIR.[N]"	"N-Term(TMT6plex); K5(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"645.71527"	"1935.13126"	"1935.13153"	"-0.14"	"-0.00009"	"12/132"	"12"	"132"	"773350.226318359"	"HCD"	"MS2"	"22.03477"	"36.2"	"100.000"	"63.8137"	"20913"	"20913"	"20888"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.1"	""	"38.9"	""	"47.5"	""	"69.1"	"0.8"	"62.6"	"62.0"	""	"810"	"10"	"36.000"	"29.000"	"4.37980750275665"	"15"	"0.001374"	"0.01671"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPPPKDPVIETIR"	"[K].dPPPkDPVIETIR.[N]"	"N-Term(TMT6plex); K5(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"645.71539"	"1935.13163"	"1935.13153"	"0.05"	"0.00003"	"15/132"	"15"	"132"	"2699675.76568604"	"HCD"	"MS2"	"7.646747"	"96.3"	"100.000"	"63.4981"	"20784"	"20784"	"20763"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"182.2"	""	"127.3"	""	"111.1"	""	"191.8"	"1.4"	"160.7"	"135.7"	""	"817"	"15"	"36.000"	"29.000"	"1.33411129442399"	"14"	"0"	"0.001021"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLRDDISSETSGDFR"	"[K].nLRDDISSETSGDFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"647.65515"	"1940.95090"	"1940.95111"	"-0.11"	"-0.00007"	"28/158"	"28"	"158"	"1201160.06237793"	"HCD"	"MS2"	"51.95593"	"33.9"	"100.000"	"60.8106"	"19710"	"19710"	"19689"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"56.0"	""	"39.2"	""	"39.5"	""	"53.0"	"0.4"	"66.5"	"66.6"	""	"844"	"53"	"36.000"	"29.000"	"0.000228724375749486"	"16"	"0"	"3.348E-07"	"1.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLRDDISSETSGDFR"	"[K].nLRDDISSETSGDFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"647.65540"	"1940.95163"	"1940.95111"	"0.27"	"0.00017"	"17/158"	"17"	"158"	"1117425.75891113"	"HCD"	"MS2"	"54.11833"	"34.0"	"100.000"	"60.9988"	"19771"	"19771"	"19750"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"70.8"	""	"32.3"	""	"40.1"	""	"49.7"	"0.9"	"62.6"	"65.9"	""	"856"	"56"	"36.000"	"29.000"	"0.000115463247708643"	"16"	"0"	"1.242E-07"	"1.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTPEDDEPDEPK"	"[K].lVTPEDDEPDEPk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"648.00708"	"1942.00669"	"1942.00572"	"0.50"	"0.00032"	"12/112"	"12"	"112"	"431607.76739502"	"HCD"	"MS2"	"42.15366"	"18.1"	"100.000"	"66.6093"	"22046"	"22046"	"22021"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.8"	""	"20.1"	""	"23.1"	""	"33.4"	""	"38.9"	"37.1"	""	"1143"	"42"	"37.000"	"30.000"	"0.00359762783502889"	"17"	"0"	"0.002504"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLDIERPTYTNLNR"	"[R].nLDIERPTYTNLNR.[L]"	"N-Term(TMT6plex); N1(Deamidated)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"650.34674"	"1949.02567"	"1949.02897"	"-1.69"	"-0.00110"	"12/144"	"12"	"144"	"257815.602844238"	"HCD"	"MS2"	"16.5463"	"12.4"	"100.000"	"66.8359"	"22154"	"22154"	"22125"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.5"	""	"16.6"	""	"25.6"	""	"13.6"	""	"19.0"	"18.7"	""	"1124"	"19"	"37.000"	"30.000"	"0.704265340317075"	"15"	"0.000936"	"0.01287"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEVNTMLGQSTEELR"	"[R].nEVNTMLGQSTEELR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"975.49481"	"1949.98235"	"1949.97997"	"1.22"	"0.00119"	"4/162"	"4"	"162"	"83149.5317993164"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"79.6055"	"27321"	"27321"	"27300"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.4"	""	"3.5"	""	"2.1"	""	"5.0"	""	"8.3"	"8.5"	""	"981"	"3"	"36.000"	"29.000"	"24.7536366454911"	"13"	"0.006739"	"0.07659"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEEMETVIPVDIMR"	"[K].gAEEmETVIPVDImR.[R]"	"N-Term(TMT6plex); M5(Oxidation); M14(Oxidation)"	"1"	"1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"650.99597"	"1950.97336"	"1950.97138"	"1.02"	"0.00066"	"5/130"	"5"	"130"	"304125.347167969"	"HCD"	"MS2"	"15.09834"	"7.6"	"100.000"	"78.8634"	"27022"	"27022"	"27001"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.1"	""	"11.3"	""	"11.1"	""	"10.5"	""	"14.5"	"16.0"	""	"946"	"14"	"36.000"	"29.000"	"2.05523336033153"	"13"	"0.0001301"	"0.004556"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGENVEDAFLEAAK"	"[K].tGENVEDAFLEAAk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"651.35052"	"1952.03702"	"1952.03769"	"-0.34"	"-0.00022"	"11/144"	"11"	"144"	"170816.175537109"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"102.4652"	"35818"	"35818"	"35812"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.5"	""	"7.2"	""	"4.9"	""	"5.6"	""	"13.4"	"7.8"	""	"1210"	"40"	"37.000"	"30.000"	"0.00669507389306488"	"17"	"0.0001301"	"0.003833"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGENVEDAFLEAAK"	"[K].tGENVEDAFLEAAk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"651.35071"	"1952.03757"	"1952.03769"	"-0.06"	"-0.00004"	"12/144"	"12"	"144"	"562773.843383789"	"HCD"	"MS2"	"3.118623"	"15.4"	"100.000"	"102.8188"	"35855"	"35855"	"35852"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.3"	""	"16.1"	""	"17.5"	""	"27.7"	"1.0"	"28.7"	"34.8"	""	"1249"	"48"	"37.000"	"30.000"	"0.000958368305758159"	"21"	"0"	"4.155E-05"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGENVEDAFLEAAK"	"[K].tGENVEDAFLEAAk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"651.35107"	"1952.03867"	"1952.03769"	"0.50"	"0.00033"	"10/144"	"10"	"144"	"173765.271240234"	"HCD"	"MS2"	"9.773138"	"4.9"	"100.000"	"102.5655"	"35781"	"35781"	"35776"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.9"	""	"5.2"	""	"6.7"	""	"5.4"	""	"12.4"	"9.6"	""	"1249"	"35"	"37.000"	"30.000"	"0.0193433835236075"	"20"	"0"	"0.0006628"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGENVEDAFLEAAK"	"[K].tGENVEDAFLEAAk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"651.35107"	"1952.03867"	"1952.03769"	"0.50"	"0.00033"	"13/144"	"13"	"144"	"654086.641235352"	"HCD"	"MS2"	"4.082074"	"17.2"	"100.000"	"102.7263"	"35894"	"35894"	"35890"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.7"	""	"12.2"	""	"14.5"	""	"33.1"	""	"40.9"	"35.4"	""	"1249"	"51"	"37.000"	"30.000"	"0.0005052803890369"	"21"	"0"	"2.316E-06"	"1.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGGTIPVVPTAEFQDR"	"[K].hGGTIPVVPTAEFQDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.8788"	"0.0000"	"1"	"1"	"1"	"651.68427"	"1953.03824"	"1953.03914"	"-0.46"	"-0.00030"	"18/146"	"18"	"146"	"716702.114562988"	"HCD"	"MS2"	"10.69336"	"9.4"	"100.000"	"67.3472"	"22347"	"22347"	"22322"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.4"	""	"12.3"	""	"11.3"	""	"16.8"	""	"15.8"	"15.8"	""	"1231"	"66"	"37.000"	"30.000"	"1.61892994901161E-05"	"24"	"0"	"3.845E-07"	"1.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGGTIPVVPTAEFQDR"	"[K].hGGTIPVVPTAEFQDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.9636"	"0.0000"	"1"	"1"	"1"	"651.68451"	"1953.03897"	"1953.03914"	"-0.08"	"-0.00006"	"16/146"	"16"	"146"	"757759.716918945"	"HCD"	"MS2"	"4.085557"	"11.8"	"100.000"	"67.2302"	"22315"	"22315"	"22284"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.7"	""	"17.2"	""	"10.9"	""	"19.5"	""	"19.1"	"25.7"	""	"1208"	"55"	"37.000"	"30.000"	"0.000175402968329653"	"18"	"0"	"2.391E-06"	"1.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGAVFMDAPVSGGVGAAR"	"[K].mGAVFmDAPVSGGVGAAR.[S]"	"N-Term(TMT6plex); M1(Oxidation); M6(Oxidation)"	"1"	"1"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"651.99481"	"1953.96988"	"1953.97238"	"-1.28"	"-0.00083"	"10/144"	"10"	"144"	"286662.614257813"	"HCD"	"MS2"	"27.60618"	"9.2"	"100.000"	"66.9511"	"22201"	"22201"	"22172"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.6"	""	"12.5"	""	"8.8"	""	"15.4"	""	"17.9"	"18.3"	""	"1049"	"31"	"37.000"	"30.000"	"0.0375617218656667"	"16"	"0"	"0.003338"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGAVFMDAPVSGGVGAAR"	"[K].mGAVFmDAPVSGGVGAAR.[S]"	"N-Term(TMT6plex); M1(Oxidation); M6(Oxidation)"	"1"	"1"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"651.99542"	"1953.97171"	"1953.97238"	"-0.34"	"-0.00022"	"8/144"	"8"	"144"	"305744.421386719"	"HCD"	"MS2"	"56.66649"	"10.7"	"100.000"	"66.9294"	"22177"	"22177"	"22148"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.4"	""	"15.1"	""	"13.8"	""	"19.6"	""	"18.4"	"19.3"	""	"1046"	"35"	"37.000"	"30.000"	"0.0156495440494608"	"17"	"0"	"0.0002314"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGIPPEQSLETAK"	"[R].eVGIPPEQSLETAk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"652.70569"	"1956.10251"	"1956.10538"	"-1.47"	"-0.00096"	"11/138"	"11"	"138"	"302431.936706543"	"HCD"	"MS2"	"24.65729"	"8.6"	"100.000"	"79.0295"	"27093"	"27093"	"27071"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.5"	""	"8.2"	""	"11.3"	""	"15.8"	""	"15.9"	"20.2"	""	"987"	"16"	"36.000"	"29.000"	"1.24533776121916"	"13"	"0.0002479"	"0.005205"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGIPPEQSLETAK"	"[R].eVGIPPEQSLETAk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"652.70618"	"1956.10398"	"1956.10538"	"-0.72"	"-0.00047"	"11/138"	"11"	"138"	"309795.800231934"	"HCD"	"MS2"	"27.84661"	"9.6"	"100.000"	"79.0340"	"27091"	"27091"	"27068"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.5"	""	"11.0"	""	"11.6"	""	"18.6"	""	"19.7"	"18.7"	""	"972"	"22"	"36.000"	"29.000"	"0.305940004868598"	"14"	"0.0001301"	"0.003892"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGIPPEQSLETAK"	"[R].eVGIPPEQSLETAk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"652.70654"	"1956.10508"	"1956.10538"	"-0.15"	"-0.00010"	"10/138"	"10"	"138"	"311101.638366699"	"HCD"	"MS2"	"44.73353"	"10.4"	"100.000"	"78.9626"	"27066"	"27066"	"27050"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.5"	""	"9.1"	""	"14.0"	""	"15.9"	""	"27.9"	"19.3"	""	"991"	"23"	"36.000"	"29.000"	"0.267327513456246"	"19"	"0"	"0.0006661"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAEVNQEYGLDPK"	"[R].aAAEVNQEYGLDPk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"982.02832"	"1963.04936"	"1963.05368"	"-2.20"	"-0.00216"	"6/136"	"6"	"136"	"120553.950561523"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"68.9621"	"23020"	"23020"	"22991"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.9"	""	"9.9"	""	"12.7"	""	"11.0"	""	"9.9"	"15.6"	""	"1211"	"23"	"37.000"	"30.000"	"0.272341702137886"	"15"	"0.0001301"	"0.004055"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAEVNQEYGLDPK"	"[R].aAAEVNQEYGLDPk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"3"	"3"	"0.9434"	"0.0000"	"1"	"1"	"1"	"655.02203"	"1963.05155"	"1963.05368"	"-1.08"	"-0.00071"	"12/136"	"12"	"136"	"1051400.28295898"	"HCD"	"MS2"	"5.367635"	"27.5"	"100.000"	"68.8285"	"22965"	"22965"	"22943"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"53.7"	""	"38.6"	""	"44.0"	""	"36.8"	""	"40.3"	"47.9"	""	"1210"	"53"	"37.000"	"30.000"	"0.000330183505960219"	"19"	"0"	"7.236E-06"	"0.933"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAEVNQEYGLDPK"	"[R].aAAEVNQEYGLDPk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"655.02264"	"1963.05338"	"1963.05368"	"-0.15"	"-0.00010"	"12/136"	"12"	"136"	"567179.375854492"	"HCD"	"MS2"	"3.965186"	"17.5"	"100.000"	"69.1763"	"23107"	"23107"	"23086"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"28.9"	""	"19.3"	""	"22.5"	""	"28.0"	""	"36.6"	"32.3"	""	"1221"	"52"	"37.000"	"30.000"	"0.000346485981601918"	"26"	"0"	"1.828E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAEVNQEYGLDPK"	"[R].aAAEVNQEYGLDPk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"3"	"3"	"0.9250"	"0.0000"	"1"	"1"	"1"	"655.02277"	"1963.05375"	"1963.05368"	"0.03"	"0.00002"	"11/136"	"11"	"136"	"1036889.7878418"	"HCD"	"MS2"	"2.224923"	"26.9"	"100.000"	"69.2655"	"23129"	"23129"	"23107"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"47.2"	""	"37.3"	""	"37.6"	""	"32.0"	""	"46.3"	"56.5"	""	"1211"	"40"	"37.000"	"30.000"	"0.00644338597534824"	"18"	"0"	"1.885E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAEVNQEYGLDPK"	"[R].aAAEVNQEYGLDPk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"3"	"3"	"0.9149"	"0.0000"	"1"	"1"	"1"	"655.02332"	"1963.05539"	"1963.05368"	"0.87"	"0.00057"	"12/136"	"12"	"136"	"815342.172607422"	"HCD"	"MS2"	"23.06446"	"23.1"	"100.000"	"68.9635"	"23006"	"23006"	"22981"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.4"	""	"34.0"	""	"37.0"	""	"35.3"	""	"36.8"	"41.7"	""	"1230"	"47"	"37.000"	"30.000"	"0.00137364691704078"	"19"	"0"	"9.16E-06"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAEVNQEYGLDPK"	"[R].aAAEVNQEYGLDPk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"982.03143"	"1963.05559"	"1963.05368"	"0.97"	"0.00096"	"6/136"	"6"	"136"	"107126.299621582"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"69.0510"	"23042"	"23042"	"23012"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.5"	""	"7.7"	""	"8.8"	""	"4.5"	""	"7.4"	"6.1"	""	"1233"	"24"	"37.000"	"30.000"	"0.248275051661646"	"14"	"0"	"0.002816"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPPLLGDHPAEYGEGR"	"[R].qPPLLGDHPAEYGEGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"655.67230"	"1965.00235"	"1965.00276"	"-0.20"	"-0.00013"	"8/164"	"8"	"164"	"1159566.78948975"	"HCD"	"MS2"	"27.56509"	"38.9"	"100.000"	"55.9509"	"17748"	"17748"	"17725"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.5"	""	"43.1"	""	"41.8"	""	"63.4"	""	"83.8"	"79.6"	""	"1063"	"36"	"37.000"	"30.000"	"0.0123738050344895"	"15"	"0"	"8.072E-05"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEQGPQVDETQFK"	"[R].tEQGPQVDETQFk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"983.01752"	"1965.02776"	"1965.03294"	"-2.64"	"-0.00259"	"9/134"	"9"	"134"	"113066.936828613"	"HCD"	"MS2"	"0"	"11.0"	"100.000"	"61.5904"	"20013"	"20013"	"19985"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"26.3"	""	"12.5"	""	"13.2"	""	"15.3"	""	"17.3"	"19.9"	""	"1184"	"23"	"37.000"	"30.000"	"0.307837629947841"	"14"	"0.000936"	"0.01332"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"3"	"655.68121"	"1965.02909"	"1965.02791"	"0.60"	"0.00039"	"5/146"	"5"	"146"	"302983.586608887"	"HCD"	"MS2"	"29.24969"	"18.0"	"100.000"	"66.1160"	"21845"	"21845"	"21816"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.7"	""	"21.0"	""	"23.8"	""	"32.0"	""	"38.5"	"33.2"	""	"1193"	"4"	"37.000"	"30.000"	"22.1111050543306"	"16"	"0.008728"	"0.1123"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEQGPQVDETQFK"	"[R].tEQGPQVDETQFk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"655.68140"	"1965.02964"	"1965.03294"	"-1.68"	"-0.00110"	"9/134"	"9"	"134"	"2747668.29711914"	"HCD"	"MS2"	"32.172"	"78.4"	"100.000"	"61.4529"	"19972"	"19972"	"19953"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"152.4"	""	"87.7"	""	"96.0"	""	"131.2"	"0.8"	"126.5"	"147.0"	""	"1189"	"54"	"37.000"	"30.000"	"0.000242745875174786"	"16"	"0"	"3.245E-06"	"1.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEQGPQVDETQFK"	"[R].tEQGPQVDETQFk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"983.01874"	"1965.03020"	"1965.03294"	"-1.40"	"-0.00137"	"4/134"	"4"	"134"	"95819.7287597656"	"HCD"	"MS2"	"100"	"10.6"	"100.000"	"61.4345"	"19965"	"19965"	"19937"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.7"	""	"13.1"	""	"13.9"	""	"18.1"	""	"17.4"	"18.0"	""	"1194"	"13"	"37.000"	"30.000"	"2.85742165116615"	"16"	"0.003449"	"0.03457"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEQGPQVDETQFK"	"[R].tEQGPQVDETQFk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"655.68237"	"1965.03257"	"1965.03294"	"-0.19"	"-0.00013"	"17/134"	"17"	"134"	"2270029.3427124"	"HCD"	"MS2"	"4.277343"	"69.3"	"100.000"	"61.5289"	"20003"	"20003"	"19985"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"128.8"	""	"94.2"	""	"89.1"	""	"105.5"	""	"127.3"	"114.6"	""	"1212"	"35"	"37.000"	"30.000"	"0.0174772309089472"	"15"	"0"	"1.184E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEQGPQVDETQFK"	"[R].tEQGPQVDETQFk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"655.68243"	"1965.03275"	"1965.03294"	"-0.10"	"-0.00006"	"13/134"	"13"	"134"	"2737382.14788818"	"HCD"	"MS2"	"16.42049"	"80.8"	"100.000"	"61.6506"	"20037"	"20037"	"20017"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"165.7"	""	"92.6"	""	"117.4"	""	"116.5"	""	"139.2"	"137.7"	""	"1214"	"48"	"37.000"	"30.000"	"0.000937969444799817"	"22"	"0"	"6.601E-06"	"0.942"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAGELQEDSGLHVLAR"	"[K].aAAGELQEDSGLHVLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZY0"	"EF-hand domain-containing protein D2 OS=Rattus norvegicus OX=10116 GN=Efhd2 PE=1 SV=1"	"Q4FZY0"	"EF-hand domain-containing protein D2 OS=Rattus norvegicus OX=10116 GN=Efhd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"656.02197"	"1966.05136"	"1966.05552"	"-2.11"	"-0.00138"	"17/158"	"17"	"158"	"668744.780273438"	"HCD"	"MS2"	"20.46393"	"21.1"	"100.000"	"67.2488"	"22322"	"22322"	"22300"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.1"	""	"24.8"	""	"34.3"	""	"37.3"	""	"37.7"	"35.7"	""	"1219"	"58"	"37.000"	"30.000"	"0.000104465697892639"	"22"	"0"	"9.734E-06"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAGELQEDSGLHVLAR"	"[K].aAAGELQEDSGLHVLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZY0"	"EF-hand domain-containing protein D2 OS=Rattus norvegicus OX=10116 GN=Efhd2 PE=1 SV=1"	"Q4FZY0"	"EF-hand domain-containing protein D2 OS=Rattus norvegicus OX=10116 GN=Efhd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"656.02338"	"1966.05558"	"1966.05552"	"0.03"	"0.00002"	"16/158"	"16"	"158"	"932386.242370605"	"HCD"	"MS2"	"25.95793"	"30.2"	"100.000"	"67.3057"	"22330"	"22330"	"22306"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.4"	""	"36.3"	""	"38.6"	""	"43.8"	""	"64.3"	"65.0"	""	"1230"	"56"	"37.000"	"30.000"	"0.00013799873831264"	"22"	"0"	"6.789E-07"	"1.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQLREPVLNDELPGR"	"[R].tQLREPVLNDELPGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.03479"	"1966.08982"	"1966.09190"	"-1.06"	"-0.00070"	"16/158"	"16"	"158"	"3511967.46948242"	"HCD"	"MS2"	"7.417752"	"72.4"	"100.000"	"66.8213"	"22133"	"22133"	"22116"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"162.8"	""	"128.3"	""	"122.9"	""	"96.3"	""	"87.2"	"86.5"	""	"1133"	"45"	"37.000"	"30.000"	"0.00187154344997356"	"15"	"0"	"1.833E-06"	"1.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQLREPVLNDELPGR"	"[R].tQLREPVLNDELPGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.03534"	"1966.09146"	"1966.09190"	"-0.22"	"-0.00015"	"10/158"	"10"	"158"	"1749539.75762939"	"HCD"	"MS2"	"6.496664"	"42.6"	"100.000"	"66.5022"	"22017"	"22017"	"21997"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"83.3"	""	"73.4"	""	"74.5"	""	"59.4"	"0.4"	"50.3"	"60.1"	""	"1134"	"31"	"37.000"	"30.000"	"0.0422263029204696"	"14"	"0"	"1.389E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQLREPVLNDELPGR"	"[R].tQLREPVLNDELPGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"1"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"656.03552"	"1966.09201"	"1966.09190"	"0.06"	"0.00004"	"12/158"	"12"	"158"	"2397924.48620605"	"HCD"	"MS2"	"10.84967"	"61.3"	"100.000"	"66.8083"	"22142"	"22142"	"22125"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"135.7"	""	"102.7"	""	"96.1"	""	"86.0"	""	"72.3"	"85.1"	""	"1135"	"51"	"37.000"	"30.000"	"0.000480801557524789"	"18"	"0"	"2.714E-06"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQLREPVLNDELPGR"	"[R].tQLREPVLNDELPGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.03619"	"1966.09403"	"1966.09190"	"1.08"	"0.00071"	"11/158"	"11"	"158"	"1211290.70812988"	"HCD"	"MS2"	"54.05582"	"31.8"	"100.000"	"66.5332"	"22015"	"22015"	"21989"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"67.0"	""	"52.1"	""	"54.1"	""	"43.0"	""	"42.5"	"42.3"	""	"1124"	"41"	"37.000"	"30.000"	"0.00465303496006331"	"15"	"0"	"7.138E-06"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYGFVHFETQEAAER"	"[K].gYGFVHFETQEAAER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"657.32471"	"1969.95957"	"1969.96056"	"-0.50"	"-0.00033"	"11/134"	"11"	"134"	"293518.08605957"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"68.5587"	"22855"	"22855"	"22831"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.5"	""	"11.5"	""	"12.9"	""	"12.3"	"1.9"	"18.5"	"13.2"	""	"801"	"21"	"36.000"	"29.000"	"0.340096780252043"	"14"	"0"	"0.0008077"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYGFVHFETQEAAER"	"[K].gYGFVHFETQEAAER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"657.32599"	"1969.96341"	"1969.96056"	"1.45"	"0.00095"	"9/134"	"9"	"134"	"187914.743835449"	"HCD"	"MS2"	"11.69472"	"7.7"	"100.000"	"68.7722"	"22928"	"22928"	"22901"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.8"	""	"8.6"	""	"15.4"	""	"13.8"	""	"12.4"	"9.3"	""	"833"	"13"	"36.000"	"29.000"	"1.90377230974595"	"13"	"0.003507"	"0.03644"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVPVEGESELVTAAK"	"[K].sVPVEGESELVTAAk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"987.55994"	"1974.11260"	"1974.11594"	"-1.70"	"-0.00167"	"7/134"	"7"	"134"	"77802.7678222656"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"81.6331"	"28142"	"28142"	"28116"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.3"	""	"3.5"	""	""	""	"3.7"	""	"6.9"	"8.1"	""	"1011"	"9"	"37.000"	"30.000"	"6.26211674491102"	"13"	"0.000936"	"0.01143"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVPVEGESELVTAAK"	"[K].sVPVEGESELVTAAk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"987.56140"	"1974.11553"	"1974.11594"	"-0.21"	"-0.00021"	"5/134"	"5"	"134"	"81803.8325195313"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"81.5634"	"28111"	"28111"	"28093"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.1"	""	"2.5"	""	"2.3"	""	"10.3"	""	"8.6"	"9.0"	""	"1024"	"10"	"37.000"	"30.000"	"5.14363284622538"	"17"	"0.001635"	"0.01992"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIQEEITGNTEALSGR"	"[R].qIQEEITGNTEALSGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"659.01563"	"1975.03232"	"1975.02936"	"1.50"	"0.00099"	"16/170"	"16"	"170"	"424104.97265625"	"HCD"	"MS2"	"6.21562"	"15.2"	"100.000"	"73.9525"	"25051"	"25051"	"25028"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.6"	""	"21.3"	""	"26.2"	""	"23.3"	""	"25.5"	"28.3"	""	"1243"	"35"	"37.000"	"30.000"	"0.0217490921308124"	"18"	"0"	"1.996E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTAIPEGTNGVEER"	"[K].dNFTAIPEGTNGVEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"989.48859"	"1977.96990"	"1977.97151"	"-0.82"	"-0.00081"	"7/176"	"7"	"176"	"58499.181640625"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"70.0720"	"23458"	"23458"	"23433"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.6"	""	"2.6"	""	"3.9"	""	"4.8"	""	"2.8"	"4.1"	""	"868"	"17"	"36.000"	"29.000"	"0.840407132352828"	"14"	"0.0006732"	"0.008911"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTAIPEGTNGVEER"	"[K].dNFTAIPEGTNGVEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"989.49097"	"1977.97466"	"1977.97151"	"1.59"	"0.00157"	"9/176"	"9"	"176"	"85854.3091430664"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"69.8628"	"23387"	"23387"	"23358"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.5"	""	"3.9"	""	"6.3"	""	"6.0"	""	"6.9"	"6.2"	""	"901"	"13"	"36.000"	"29.000"	"2.33719417537497"	"13"	"0"	"0.001541"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTAIPEGTNGVEER"	"[K].dNFTAIPEGTnGVEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"989.97968"	"1978.95207"	"1978.95553"	"-1.75"	"-0.00173"	"4/176"	"4"	"176"	"58715.7592163086"	"HCD"	"MS2"	"20.32758"	"1.7"	"100.000"	"73.5558"	"24890"	"24890"	"24866"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.5"	""	""	""	"3.2"	"2.0"	"1.5"	""	""	"4.4"	""	"701"	"4"	"35.000"	"28.000"	"12.4936122265899"	"13"	"0.005067"	"0.05731"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEASDYLELDTIK"	"[K].eEASDYLELDTIk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"662.02264"	"1984.05338"	"1984.05267"	"0.36"	"0.00023"	"11/116"	"11"	"116"	"311176.950012207"	"HCD"	"MS2"	"65.01447"	"7.1"	"100.000"	"101.5847"	"35539"	"35539"	"35531"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.5"	""	"6.5"	""	"8.5"	""	"10.0"	""	"11.5"	"14.9"	""	"1220"	"26"	"37.000"	"30.000"	"0.156433526227581"	"21"	"0"	"0.002496"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGQEVVFVAEPDNK"	"[K].tGQEVVFVAEPDNk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"664.36133"	"1991.06943"	"1991.08498"	"-7.81"	"-0.00518"	"8/148"	"8"	"148"	"494593.960266113"	"HCD"	"MS2"	"30.39665"	"13.6"	"100.000"	"76.9986"	"26278"	"26278"	"26253"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.3"	""	"12.6"	""	"13.0"	""	"25.9"	""	"32.9"	"29.6"	""	"1352"	"18"	"38.000"	"31.000"	"1.11159528489329"	"22"	"0"	"0.00175"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGQEVVFVAEPDNK"	"[K].tGQEVVFVAEPDNk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"664.36517"	"1991.08097"	"1991.08498"	"-2.01"	"-0.00134"	"11/148"	"11"	"148"	"581576.108398438"	"HCD"	"MS2"	"9.361079"	"16.2"	"100.000"	"77.1038"	"26311"	"26311"	"26291"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.8"	""	"19.7"	""	"23.1"	""	"28.2"	""	"34.0"	"31.2"	""	"1284"	"25"	"38.000"	"31.000"	"0.182194401625948"	"16"	"0"	"0.00027"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEEPSGTGSDELIK"	"[R].aTEEPSGTGSDELIk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"664.68732"	"1992.04740"	"1992.05374"	"-3.18"	"-0.00211"	"12/132"	"12"	"132"	"820055.831359863"	"HCD"	"MS2"	"0"	"27.9"	"100.000"	"61.9647"	"20179"	"20179"	"20163"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"44.7"	""	"31.9"	""	"31.1"	""	"46.5"	""	"54.6"	"58.4"	""	"1269"	"96"	"38.000"	"31.000"	"1.68047333794596E-08"	""	"0"	"6.436E-08"	"1.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVYETSVLDPDEGIR"	"[K].gLVYETSVLDPDEGIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"3"	"3"	"0.9194"	"0.0000"	"1"	"1"	"1"	"664.68738"	"1992.04758"	"1992.04870"	"-0.56"	"-0.00037"	"15/136"	"15"	"136"	"585836.716674805"	"HCD"	"MS2"	"13.31951"	"2.9"	"100.000"	"102.3117"	"35710"	"35710"	"35705"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.9"	""	"3.8"	""	""	""	"5.4"	""	"7.8"	"4.7"	""	"1269"	"62"	"38.000"	"31.000"	"3.57628092621568E-05"	"21"	"0"	"3.748E-06"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVYETSVLDPDEGIR"	"[K].gLVYETSVLDPDEGIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"664.68756"	"1992.04813"	"1992.04870"	"-0.29"	"-0.00019"	"11/136"	"11"	"136"	"320993.151550293"	"HCD"	"MS2"	"34.51136"	"3.3"	"100.000"	"102.1723"	"35728"	"35728"	"35721"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.2"	""	"6.6"	""	"4.3"	""	"5.3"	""	"6.5"	"5.4"	""	"1272"	"38"	"38.000"	"31.000"	"0.0103623227675886"	"15"	"0"	"0.0002141"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVYETSVLDPDEGIR"	"[K].gLVYETSVLDPDEGIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"664.68774"	"1992.04868"	"1992.04870"	"-0.01"	"-0.00001"	"17/136"	"17"	"136"	"772121.442260742"	"HCD"	"MS2"	"10.06847"	"4.2"	"100.000"	"102.5707"	"35783"	"35783"	"35778"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.3"	""	"6.5"	""	"4.3"	""	"10.2"	""	"6.3"	"8.1"	""	"1290"	"67"	"38.000"	"31.000"	"1.38535065581419E-05"	"17"	"0"	"2.151E-06"	"1.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVYETSVLDPDEGIR"	"[K].gLVYETSVLDPDEGIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"996.52814"	"1992.04900"	"1992.04870"	"0.15"	"0.00015"	"4/136"	"4"	"136"	"69516.1943359375"	"HCD"	"MS2"	"0"	"1.4"	"100.000"	"102.2074"	"35739"	"35739"	"35735"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	"2.7"	""	"4.1"	""	"2.5"	""	""	"3.7"	""	"1280"	"4"	"38.000"	"31.000"	"23.0770331533851"	"13"	"0.003507"	"0.03662"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVYETSVLDPDEGIR"	"[K].gLVYETSVLDPDEGIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"996.52820"	"1992.04912"	"1992.04870"	"0.21"	"0.00021"	"10/136"	"10"	"136"	"150699.716003418"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"102.4704"	"35820"	"35820"	"35813"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.0"	""	"11.8"	""	"9.3"	""	"8.9"	""	"8.6"	"7.5"	""	"1284"	"20"	"38.000"	"31.000"	"0.585510958866494"	"18"	"0"	"0.0006825"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVYETSVLDPDEGIR"	"[K].gLVYETSVLDPDEGIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"664.68793"	"1992.04923"	"1992.04870"	"0.26"	"0.00018"	"13/136"	"13"	"136"	"212437.152038574"	"HCD"	"MS2"	"15.26503"	"1.7"	"100.000"	"102.6911"	"35883"	"35883"	"35880"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.6"	""	"2.1"	""	"4.3"	""	"3.6"	""	"2.6"	""	""	"1286"	"42"	"38.000"	"31.000"	"0.00370860835961217"	"16"	"0"	"8.488E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVYETSVLDPDEGIR"	"[K].gLVYETSVLDPDEGIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"996.52832"	"1992.04936"	"1992.04870"	"0.33"	"0.00033"	"10/136"	"10"	"136"	"125027.126281738"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"102.5497"	"35777"	"35777"	"35774"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.5"	""	"6.3"	""	"6.1"	""	"5.4"	""	"5.5"	"10.0"	""	"1296"	"30"	"38.000"	"31.000"	"0.0675421694246861"	"17"	"0"	"0.0003712"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVYETSVLDPDEGIR"	"[K].gLVYETSVLDPDEGIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"3"	"3"	"0.9508"	"0.0000"	"1"	"1"	"1"	"664.68799"	"1992.04941"	"1992.04870"	"0.36"	"0.00024"	"14/136"	"14"	"136"	"1142714.99047852"	"HCD"	"MS2"	"5.667765"	"6.2"	"100.000"	"102.4309"	"35808"	"35808"	"35803"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.1"	""	"9.3"	""	"8.4"	""	"10.7"	""	"7.4"	"10.4"	""	"1296"	"61"	"38.000"	"31.000"	"5.49003364363107E-05"	"19"	"0"	"3.359E-07"	"1.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEEPSGTGSDELIK"	"[R].aTEEPSGTGSDELIk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.8475"	"0.0000"	"1"	"1"	"1"	"996.52838"	"1992.04949"	"1992.05374"	"-2.13"	"-0.00213"	"17/132"	"17"	"132"	"504442.838378906"	"HCD"	"MS2"	"0"	"41.8"	"100.000"	"61.8570"	"20122"	"20122"	"20097"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"75.8"	""	"44.7"	""	"41.8"	""	"77.4"	"1.7"	"79.7"	"75.0"	""	"1296"	"59"	"38.000"	"31.000"	"8.02740188071679E-05"	"25"	"0"	"1.526E-06"	"1.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEEPSGTGSDELIK"	"[R].aTEEPSGTGSDELIk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.7903"	"0.0000"	"1"	"1"	"1"	"664.68805"	"1992.04959"	"1992.05374"	"-2.08"	"-0.00138"	"11/132"	"11"	"132"	"612894.613220215"	"HCD"	"MS2"	"0"	"21.4"	"100.000"	"62.1227"	"20227"	"20227"	"20215"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"35.4"	""	"26.3"	""	"25.4"	""	"35.8"	""	"42.6"	"38.3"	""	"1295"	"62"	"38.000"	"31.000"	"4.08544880550925E-05"	"29"	"0"	"6.695E-06"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVYETSVLDPDEGIR"	"[K].gLVYETSVLDPDEGIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"996.52881"	"1992.05034"	"1992.04870"	"0.82"	"0.00082"	"10/136"	"10"	"136"	"79314.5853271484"	"HCD"	"MS2"	"9.779532"	"1.8"	"100.000"	"102.2977"	"35706"	"35706"	"35703"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.5"	""	"3.4"	""	""	""	"1.9"	""	"4.0"	"4.3"	""	"1319"	"27"	"38.000"	"31.000"	"0.130081279446775"	"14"	"0"	"0.0003075"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEEPSGTGSDELIK"	"[R].aTEEPSGTGSDELIk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"996.52924"	"1992.05120"	"1992.05374"	"-1.28"	"-0.00127"	"12/132"	"12"	"132"	"205509.601745605"	"HCD"	"MS2"	"0"	"16.8"	"100.000"	"61.5444"	"19994"	"19994"	"19969"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.5"	""	"16.9"	""	"15.4"	""	"33.2"	""	"31.1"	"31.6"	""	"1311"	"48"	"38.000"	"31.000"	"0.00111833700599155"	"27"	"0"	"0.0004131"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEEPSGTGSDELIK"	"[R].aTEEPSGTGSDELIk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"664.68872"	"1992.05161"	"1992.05374"	"-1.07"	"-0.00071"	"11/132"	"11"	"132"	"1550169.01019287"	"HCD"	"MS2"	"20.64073"	"40.0"	"100.000"	"61.5030"	"19977"	"19977"	"19953"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"71.5"	""	"48.0"	""	"44.4"	""	"71.1"	""	"79.2"	"67.3"	""	"1318"	"78"	"38.000"	"31.000"	"9.99736192155702E-07"	"30"	"0"	"1.037E-06"	"1.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEEPSGTGSDELIK"	"[R].aTEEPSGTGSDELIk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.8659"	"0.0000"	"1"	"1"	"1"	"664.68915"	"1992.05289"	"1992.05374"	"-0.42"	"-0.00028"	"12/132"	"12"	"132"	"6105661.07104492"	"HCD"	"MS2"	"3.281312"	"140.8"	"100.000"	"61.8020"	"20099"	"20099"	"20081"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"255.6"	""	"147.6"	""	"142.2"	""	"224.6"	"1.1"	"288.0"	"276.4"	""	"1309"	"82"	"38.000"	"31.000"	"3.91660388966979E-07"	"29"	"0"	"2.185E-07"	"1.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEEPSGTGSDELIK"	"[R].aTEEPSGTGSDELIk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.8587"	"0.0000"	"1"	"1"	"1"	"664.68951"	"1992.05399"	"1992.05374"	"0.13"	"0.00008"	"12/132"	"12"	"132"	"6004357.83459473"	"HCD"	"MS2"	"1.801382"	"130.4"	"100.000"	"61.6462"	"20051"	"20051"	"20033"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"232.4"	""	"139.3"	""	"127.2"	""	"217.2"	"0.9"	"261.9"	"257.5"	""	"1315"	"92"	"38.000"	"31.000"	"4.48637691398148E-08"	"31"	"0"	"3.901E-08"	"1.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEEPSGTGSDELIK"	"[R].aTEEPSGTGSDELIk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.9432"	"0.0000"	"1"	"1"	"1"	"996.53076"	"1992.05425"	"1992.05374"	"0.26"	"0.00026"	"20/132"	"20"	"132"	"571543.344055176"	"HCD"	"MS2"	"0"	"49.8"	"100.000"	"61.6646"	"20059"	"20059"	"20033"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"94.1"	""	"51.6"	""	"51.7"	""	"79.0"	"1.6"	"86.9"	"106.8"	""	"1313"	"88"	"38.000"	"31.000"	"1.13562443982471E-07"	"23"	"0"	"5.554E-07"	"1.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEEPSGTGSDELIK"	"[R].aTEEPSGTGSDELIk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"996.53101"	"1992.05474"	"1992.05374"	"0.50"	"0.00050"	"9/132"	"9"	"132"	"123224.327209473"	"HCD"	"MS2"	"100"	"11.2"	"100.000"	"61.3564"	"19933"	"19933"	"19905"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.7"	""	"13.7"	""	"8.8"	""	"20.8"	""	"25.1"	"22.4"	""	"1306"	"14"	"38.000"	"31.000"	"2.74734488335042"	"16"	"0"	"0.0009782"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDGVLDSVTDQDSK"	"[R].rDGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"1"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"665.02417"	"1993.05796"	"1993.06022"	"-1.14"	"-0.00075"	"6/152"	"6"	"152"	"358775.314819336"	"HCD"	"MS2"	"9.121066"	"19.0"	"100.000"	"56.8862"	"18144"	"18144"	"18115"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.7"	""	"19.7"	""	"22.1"	""	"30.2"	""	"40.1"	"43.7"	""	"1228"	"25"	"37.000"	"30.000"	"0.210459420939521"	"17"	"0.0002479"	"0.00545"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDGVLDSVTDQDSK"	"[R].rDGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"1"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"665.02448"	"1993.05887"	"1993.06022"	"-0.68"	"-0.00045"	"14/152"	"14"	"152"	"1383448.19073486"	"HCD"	"MS2"	"0"	"52.0"	"100.000"	"54.2465"	"17070"	"17070"	"17049"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"77.0"	""	"42.3"	""	"60.3"	""	"95.8"	""	"123.6"	"98.9"	""	"1212"	"27"	"37.000"	"30.000"	"0.134113539402102"	"21"	"0"	"1.97E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDGVLDSVTDQDSK"	"[R].rDGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"1"	"4"	"4"	"0.9130"	"0.0000"	"1"	"1"	"1"	"499.02020"	"1993.05898"	"1993.06022"	"-0.62"	"-0.00031"	"11/152"	"11"	"152"	"2849505.13861084"	"HCD"	"MS2"	"4.983005"	"56.1"	"100.000"	"54.1548"	"17022"	"17022"	"16992"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"74.8"	""	"52.8"	""	"60.9"	""	"95.7"	"1.8"	"138.2"	"109.8"	""	"1212"	"23"	"37.000"	"30.000"	"0.293408454755964"	"16"	"0"	"3.648E-05"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDGVLDSVTDQDSK"	"[R].rDGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"665.02454"	"1993.05906"	"1993.06022"	"-0.58"	"-0.00039"	"11/152"	"11"	"152"	"3862017.8359375"	"HCD"	"MS2"	"5.341569"	"105.3"	"100.000"	"54.4064"	"17121"	"17121"	"17104"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"162.8"	""	"87.4"	""	"95.5"	""	"175.6"	""	"255.4"	"225.5"	""	"1214"	"56"	"37.000"	"30.000"	"0.000143942383933662"	"16"	"0"	"1.991E-07"	"1.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDGVLDSVTDQDSK"	"[R].rDGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"1"	"4"	"4"	"0.8571"	"0.0000"	"1"	"1"	"1"	"499.02023"	"1993.05910"	"1993.06022"	"-0.56"	"-0.00028"	"9/152"	"9"	"152"	"3023463.48126221"	"HCD"	"MS2"	"11.84158"	"56.3"	"100.000"	"53.9082"	"16932"	"16932"	"16907"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"85.1"	""	"50.0"	""	"56.7"	""	"96.8"	"0.8"	"135.8"	"110.2"	""	"1226"	"28"	"37.000"	"30.000"	"0.105793862779"	"18"	"0"	"1.223E-06"	"1.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDGVLDSVTDQDSK"	"[R].rDGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"499.02026"	"1993.05922"	"1993.06022"	"-0.50"	"-0.00025"	"7/152"	"7"	"152"	"791058.658752441"	"HCD"	"MS2"	"18.29704"	"25.8"	"100.000"	"54.4783"	"17150"	"17150"	"17120"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.2"	""	"26.0"	""	"34.6"	""	"43.0"	""	"56.6"	"50.3"	""	"1234"	"8"	"37.000"	"30.000"	"10.8463886981251"	"13"	"0.0001301"	"0.004751"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDGVLDSVTDQDSK"	"[R].rDGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"665.02460"	"1993.05924"	"1993.06022"	"-0.49"	"-0.00033"	"9/152"	"9"	"152"	"393774.474914551"	"HCD"	"MS2"	"0"	"18.8"	"100.000"	"57.0656"	"18203"	"18203"	"18176"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.6"	""	"19.1"	""	"24.6"	""	"28.1"	""	"44.4"	"38.8"	""	"1234"	"22"	"37.000"	"30.000"	"0.417143195816853"	"14"	"0.001546"	"0.01857"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDGVLDSVTDQDSK"	"[R].rDGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"665.02460"	"1993.05924"	"1993.06022"	"-0.49"	"-0.00033"	"10/152"	"10"	"152"	"9676214.19604492"	"HCD"	"MS2"	"2.673445"	"232.3"	"100.000"	"53.8528"	"16909"	"16909"	"16892"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"346.1"	""	"173.8"	""	"240.5"	""	"431.5"	"0.7"	"554.3"	"461.5"	""	"1234"	"57"	"37.000"	"30.000"	"0.000125396427574765"	"16"	"0"	"1.675E-07"	"1.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDGVLDSVTDQDSK"	"[R].rDGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"665.02478"	"1993.05979"	"1993.06022"	"-0.22"	"-0.00014"	"11/152"	"11"	"152"	"10383872.6062012"	"HCD"	"MS2"	"3.424181"	"245.2"	"100.000"	"54.1226"	"17009"	"17009"	"16992"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"355.3"	""	"179.6"	""	"248.9"	""	"462.6"	"0.2"	"587.5"	"497.6"	""	"1222"	"51"	"37.000"	"30.000"	"0.000489825296729872"	"16"	"0"	"1.988E-07"	"1.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDDEAESQGLSPFGK"	"[K].gDDEAESQGLSPFGk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"665.67340"	"1995.00565"	"1995.00712"	"-0.74"	"-0.00049"	"14/144"	"14"	"144"	"346985.206848145"	"HCD"	"MS2"	"3.815544"	"14.7"	"100.000"	"76.7379"	"26172"	"26172"	"26148"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.2"	""	"13.3"	""	"10.5"	""	"24.8"	"1.6"	"38.7"	"40.9"	""	"1082"	"48"	"37.000"	"30.000"	"0.000951036675151653"	"19"	"0"	"5.233E-06"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDDEAESQGLSPFGK"	"[K].gDDEAESQGLSPFGk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"3"	"3"	"0.9831"	"0.0000"	"1"	"1"	"1"	"665.67407"	"1995.00766"	"1995.00712"	"0.27"	"0.00018"	"14/144"	"14"	"144"	"437327.073547363"	"HCD"	"MS2"	"10.74356"	"16.0"	"100.000"	"76.8016"	"26189"	"26189"	"26172"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.2"	""	"9.2"	""	"8.4"	""	"35.6"	""	"46.0"	"40.3"	""	"1094"	"59"	"37.000"	"30.000"	"6.90219661421097E-05"	"17"	"0"	"1.748E-06"	"1.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAYEFSETESMLK"	"[K].sAYEFSETESmLk.[I]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"666.00348"	"1995.99588"	"1995.99853"	"-1.33"	"-0.00088"	"9/114"	"9"	"114"	"286582.660217285"	"HCD"	"MS2"	"33.47419"	"11.0"	"100.000"	"78.8402"	"27017"	"27017"	"26994"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.5"	""	"13.5"	""	"10.0"	""	"22.8"	""	"20.8"	"23.6"	""	"1023"	"25"	"37.000"	"30.000"	"0.161378486485612"	"16"	"0"	"0.003025"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVDEFSGAEHIDQLR"	"[K].gTVDEFSGAEHIDQLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"0.9348"	"0.0000"	"1"	"1"	"1"	"668.33826"	"2003.00022"	"2003.00315"	"-1.46"	"-0.00098"	"21/146"	"21"	"146"	"2167871.41394043"	"HCD"	"MS2"	"17.18849"	"34.2"	"100.000"	"70.9510"	"23830"	"23830"	"23809"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.7"	""	"17.4"	""	"11.2"	""	"97.8"	""	"99.6"	"82.6"	""	"939"	"46"	"36.000"	"29.000"	"0.00112625205547965"	"18"	"0"	"4.284E-08"	"1.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVDEFSGAEHIDQLR"	"[K].gTVDEFSGAEHIDQLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"668.33923"	"2003.00315"	"2003.00315"	"0.00"	"0.00000"	"20/146"	"20"	"146"	"1930028.95690918"	"HCD"	"MS2"	"18.14827"	"34.0"	"100.000"	"71.0358"	"23851"	"23851"	"23829"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.3"	""	"13.9"	""	"23.3"	""	"96.9"	""	"93.6"	"78.8"	""	"974"	"38"	"36.000"	"29.000"	"0.00707178357765231"	"18"	"0"	"5.961E-07"	"1.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQNNHYAMEDVATR"	"[K].lIQNNHYAMEDVATR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.67615"	"2004.01389"	"2004.01702"	"-1.56"	"-0.00105"	"14/144"	"14"	"144"	"561814.061584473"	"HCD"	"MS2"	"16.98401"	"15.8"	"100.000"	"61.1099"	"19832"	"19832"	"19810"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.7"	""	"27.2"	""	"14.3"	""	"22.9"	""	"28.3"	"31.3"	""	"1079"	"30"	"37.000"	"30.000"	"0.0550796851460293"	"14"	"0"	"7.008E-05"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQNNHYAMEDVATR"	"[K].lIQNNHYAMEDVATR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.67700"	"2004.01645"	"2004.01702"	"-0.29"	"-0.00019"	"14/144"	"14"	"144"	"584349.903015137"	"HCD"	"MS2"	"4.312199"	"15.7"	"100.000"	"61.2313"	"19866"	"19866"	"19841"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.2"	""	"19.7"	""	"18.9"	""	"17.6"	""	"33.7"	"32.8"	""	"1081"	"38"	"37.000"	"30.000"	"0.00864561114466228"	"15"	"0"	"5.89E-05"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFVQEDVYDEFVER"	"[R].tFVQEDVYDEFVER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.99634"	"2004.97446"	"2004.97520"	"-0.37"	"-0.00025"	"13/148"	"13"	"148"	"235984.68762207"	"HCD"	"MS2"	"16.33612"	"3.5"	"100.000"	"107.0045"	"37283"	"37283"	"37269"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.7"	""	"4.0"	""	"4.3"	""	"4.5"	""	"9.1"	"7.0"	""	"771"	"20"	"35.000"	"28.000"	"0.407403149801865"	"14"	"0"	"0.0004753"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAGTDGPFQEVDGVASTR"	"[R].aAGTDGPFQEVDGVASTR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64604"	"Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1"	"Q64604"	"Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"669.67120"	"2006.99906"	"2006.99806"	"0.50"	"0.00033"	"10/180"	"10"	"180"	"204914.954162598"	"HCD"	"MS2"	"7.712478"	"7.3"	"100.000"	"73.5512"	"24888"	"24888"	"24866"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.6"	""	"6.4"	""	"10.6"	""	"12.3"	""	"11.1"	"19.1"	""	"1002"	"21"	"36.000"	"30.000"	"0.425439417993193"	"17"	"0.0008629"	"0.01071"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAGTDGPFQEVDGVASTR"	"[R].aAGTDGPFQEVDGVASTR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64604"	"Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1"	"Q64604"	"Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"669.67194"	"2007.00125"	"2006.99806"	"1.59"	"0.00106"	"11/180"	"11"	"180"	"191587.841308594"	"HCD"	"MS2"	"74.89771"	"8.1"	"100.000"	"73.6563"	"24918"	"24918"	"24891"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.7"	""	"8.1"	""	"10.8"	""	"14.4"	""	"10.5"	"18.5"	""	"1004"	"20"	"37.000"	"30.000"	"0.550432054463879"	"14"	"0"	"0.0009165"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQYDNDVTVWSPQGR"	"[R].nQYDNDVTVWSPQGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1004.48920"	"2007.97112"	"2007.97218"	"-0.53"	"-0.00053"	"5/154"	"5"	"154"	"169333.057678223"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"72.6633"	"24528"	"24528"	"24497"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"19.6"	""	"16.6"	""	"12.9"	""	"10.6"	""	"13.4"	"12.7"	""	"862"	"26"	"36.000"	"29.000"	"0.118980905603097"	"14"	"0"	"0.003348"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQYDNDVTVWSPQGR"	"[R].nQYDNDVTVWSPQGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1004.48987"	"2007.97246"	"2007.97218"	"0.14"	"0.00014"	"6/154"	"6"	"154"	"92807.9723510742"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"73.0291"	"24663"	"24663"	"24638"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.5"	""	"9.0"	""	"10.5"	""	"4.4"	""	"7.4"	"9.3"	""	"881"	"33"	"36.000"	"29.000"	"0.0198128026080493"	"15"	"0"	"0.001504"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"AAGTDGPFQEVDGVASTR"	"[R].aAGTDGPFqEVDGVASTR.[Y]"	"N-Term(TMT6plex); Q9(Deamidated)"	"1"	"1"	"Q64604"	"Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1"	"Q64604"	"Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"670.00470"	"2007.99955"	"2007.98208"	"8.70"	"0.00582"	"7/180"	"7"	"180"	"203114.892822266"	"HCD"	"MS2"	"6.239863"	"5.9"	"100.000"	"73.7993"	"24976"	"24976"	"24953"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.8"	""	"7.8"	""	"9.6"	""	"8.7"	""	"14.3"	"11.0"	""	"1020"	"3"	"37.000"	"30.000"	"25.7970577621588"	"15"	"0.0023"	"0.02293"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDYNASVSVPDSSGPER"	"[R].tDYNASVSVPDSSGPER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"1005.48346"	"2009.95964"	"2009.96134"	"-0.85"	"-0.00085"	"8/184"	"8"	"184"	"96302.3244628906"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"55.7461"	"17679"	"17679"	"17651"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.5"	""	"7.7"	""	"6.9"	""	"5.9"	""	"8.6"	"7.2"	""	"730"	"22"	"35.000"	"28.000"	"0.225575986050522"	"15"	"0"	"0.0005542"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDYNASVSVPDSSGPER"	"[R].tDYNASVSVPDSSGPER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"1005.48615"	"2009.96501"	"2009.96134"	"1.83"	"0.00183"	"10/184"	"10"	"184"	"148703.588745117"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"55.9692"	"17756"	"17756"	"17725"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.7"	""	"6.1"	""	"11.3"	""	"11.9"	""	"8.0"	"7.8"	""	"771"	"31"	"35.000"	"28.000"	"0.0331913091467164"	"16"	"0"	"0.0006609"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDATEESDLAQQYGVR"	"[K].vDATEESDLAQQYGVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"670.66962"	"2009.99430"	"2009.99773"	"-1.71"	"-0.00114"	"13/142"	"13"	"142"	"226032.35357666"	"HCD"	"MS2"	"4.922959"	"7.0"	"100.000"	"81.0469"	"27904"	"27904"	"27889"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.9"	""	"10.3"	""	"7.2"	""	"7.8"	""	"9.6"	"13.7"	""	"958"	"38"	"36.000"	"29.000"	"0.00757417810810514"	"15"	"0"	"7.347E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDATEESDLAQQYGVR"	"[K].vDATEESDLAQQYGVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"670.67017"	"2009.99594"	"2009.99773"	"-0.89"	"-0.00059"	"9/142"	"9"	"142"	"108514.607788086"	"HCD"	"MS2"	"40.13213"	"6.4"	"100.000"	"81.2366"	"27982"	"27982"	"27962"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.2"	""	"5.5"	""	"5.9"	""	"4.0"	""	"11.1"	"14.1"	""	"962"	"14"	"36.000"	"29.000"	"1.76256473405608"	"13"	"0.0004639"	"0.007787"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDATEESDLAQQYGVR"	"[K].vDATEESDLAQQYGVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.7833"	"0.0000"	"1"	"1"	"1"	"670.67047"	"2009.99686"	"2009.99773"	"-0.43"	"-0.00029"	"15/142"	"15"	"142"	"327325.507446289"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"81.0268"	"27897"	"27897"	"27879"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.5"	""	"9.7"	""	"7.4"	""	"12.7"	""	"14.2"	"18.7"	""	"965"	"60"	"36.000"	"29.000"	"5.09914448195591E-05"	"29"	"0"	"2.856E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEAANVTGPDGVPVEGSR"	"[K].gAEAANVTGPDGVPVEGSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62764"	"Y-box-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ybx3 PE=1 SV=1"	"Q62764"	"Y-box-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ybx3 PE=1 SV=1"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"671.34589"	"2012.02311"	"2012.02461"	"-0.75"	"-0.00050"	"20/200"	"20"	"200"	"938532.179382324"	"HCD"	"MS2"	"38.07787"	"27.7"	"100.000"	"54.7334"	"17266"	"17266"	"17239"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"47.4"	""	"37.4"	""	"34.8"	""	"39.6"	"0.3"	"45.3"	"57.6"	""	"1131"	"48"	"37.000"	"30.000"	"0.000953745735857334"	"20"	"0"	"1.003E-07"	"1.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSDSSLGTPDGRPELR"	"[R].vPSDSSLGTPDGRPELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.35846"	"2012.06083"	"2012.06100"	"-0.09"	"-0.00006"	"8/160"	"8"	"160"	"646732.537841797"	"HCD"	"MS2"	"30.33041"	"22.6"	"100.000"	"57.6646"	"18461"	"18461"	"18437"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.9"	""	"24.3"	""	"29.7"	""	"34.2"	"0.5"	"46.6"	"44.1"	""	"1238"	"18"	"37.000"	"30.000"	"1.08315510025866"	"14"	"0"	"0.0005087"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSDSSLGTPDGRPELR"	"[R].vPSDSSLGTPDGRPELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.35870"	"2012.06156"	"2012.06100"	"0.28"	"0.00019"	"15/160"	"15"	"160"	"892623.425598145"	"HCD"	"MS2"	"19.15108"	"30.1"	"100.000"	"57.8900"	"18538"	"18538"	"18514"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"41.6"	""	"36.4"	""	"35.9"	""	"46.4"	""	"58.2"	"67.0"	""	"1251"	"27"	"37.000"	"30.000"	"0.114347668519729"	"14"	"0"	"2.499E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EASDPQPEDVDGGLK"	"[K].eASDPQPEDVDGGLk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"B2GUZ5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1"	"B2GUZ5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"672.34851"	"2015.03098"	"2015.03334"	"-1.17"	"-0.00079"	"14/150"	"14"	"150"	"1413629.51593018"	"HCD"	"MS2"	"27.39796"	"56.4"	"100.000"	"60.8950"	"19729"	"19729"	"19702"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"91.7"	""	"70.8"	""	"68.7"	""	"93.0"	""	"107.0"	"103.0"	""	"1108"	"34"	"37.000"	"30.000"	"0.0235781520876094"	"17"	"0"	"0.0002336"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EASDPQPEDVDGGLK"	"[K].eASDPQPEDVDGGLk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"B2GUZ5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1"	"B2GUZ5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1008.02002"	"2015.03276"	"2015.03334"	"-0.28"	"-0.00029"	"3/150"	"3"	"150"	"85347.7174072266"	"HCD"	"MS2"	"0"	"4.7"	"100.000"	"60.9341"	"19745"	"19745"	"19718"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.4"	""	"8.7"	""	"5.7"	""	"7.2"	""	"6.9"	"8.1"	""	"1129"	"2"	"37.000"	"30.000"	"31.9642078662094"	"13"	"0.008668"	"0.1082"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EASDPQPEDVDGGLK"	"[K].eASDPQPEDVDGGLk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"B2GUZ5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1"	"B2GUZ5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"672.34943"	"2015.03373"	"2015.03334"	"0.19"	"0.00013"	"12/150"	"12"	"150"	"992220.68963623"	"HCD"	"MS2"	"13.89224"	"39.5"	"100.000"	"60.6585"	"19648"	"19648"	"19625"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"63.2"	""	"60.3"	""	"37.8"	""	"65.1"	""	"72.1"	"78.6"	""	"1127"	"28"	"37.000"	"30.000"	"0.0805181745621006"	"14"	"0"	"0.0002861"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEEAIQLDGLNASQIR"	"[R].eEEAIQLDGLNASQIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1008.03162"	"2015.05596"	"2015.06066"	"-2.34"	"-0.00235"	"5/164"	"5"	"164"	"48564.6203613281"	"HCD"	"MS2"	"0"	"1.7"	"100.000"	"89.5502"	"31242"	"31242"	"31226"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	"3.3"	""	"4.1"	""	"4.9"	"3.8"	""	"1190"	"5"	"37.000"	"30.000"	"17.2789347940635"	"13"	"0.004817"	"0.05082"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEEAIQLDGLNASQIR"	"[R].eEEAIQLDGLNASQIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.6207"	"0.0000"	"1"	"1"	"1"	"672.35712"	"2015.05680"	"2015.06066"	"-1.92"	"-0.00129"	"6/164"	"6"	"164"	"159479.304199219"	"HCD"	"MS2"	"11.73966"	"3.2"	"100.000"	"89.6864"	"31296"	"31296"	"31279"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.3"	""	"3.5"	""	"3.4"	""	"5.2"	""	"7.2"	"6.7"	""	"1218"	"29"	"37.000"	"30.000"	"0.0827212888971575"	"26"	"0"	"0.003674"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEEAIQLDGLNASQIR"	"[R].eEEAIQLDGLNASQIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"672.35748"	"2015.05790"	"2015.06066"	"-1.37"	"-0.00092"	"13/164"	"13"	"164"	"272543.886352539"	"HCD"	"MS2"	"21.55203"	"4.9"	"100.000"	"89.6964"	"31301"	"31301"	"31286"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.0"	""	"5.9"	""	"6.1"	""	"6.7"	""	"10.7"	"10.6"	""	"1217"	"36"	"37.000"	"30.000"	"0.0163779892818953"	"27"	"0"	"0.001128"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEEAIQLDGLNASQIR"	"[R].eEEAIQLDGLNASQIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.6531"	"0.0000"	"1"	"1"	"1"	"672.35846"	"2015.06083"	"2015.06066"	"0.08"	"0.00005"	"13/164"	"13"	"164"	"187592.369384766"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"89.3982"	"31184"	"31184"	"31175"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.6"	""	"6.6"	""	"4.7"	""	"5.9"	""	"5.0"	"6.0"	""	"1223"	"49"	"37.000"	"30.000"	"0.00079872349809262"	""	"0"	"2.108E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEEAIQLDGLNASQIR"	"[R].eEEAIQLDGLNASQIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"672.36169"	"2015.07053"	"2015.06066"	"4.90"	"0.00329"	"5/164"	"5"	"164"	"128209.11505127"	"HCD"	"MS2"	"6.828307"	"4.1"	"100.000"	"89.3558"	"31167"	"31167"	"31155"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.8"	""	"5.5"	""	"5.6"	""	"6.1"	""	"8.5"	"7.9"	""	"1245"	"17"	"37.000"	"30.000"	"1.15382343557572"	"15"	"0.001211"	"0.01422"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGQPGGELMLGGTDSR"	"[R].dPTGQPGGELMLGGTDSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1008.99512"	"2016.98296"	"2016.98578"	"-1.40"	"-0.00141"	"10/194"	"10"	"194"	"140546.538452148"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"71.1257"	"23902"	"23902"	"23873"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.2"	""	"11.7"	""	"8.6"	""	"6.1"	""	"9.6"	"13.5"	""	"867"	"16"	"36.000"	"29.000"	"1.14548419629906"	"13"	"0"	"0.001556"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGQPGGELMLGGTDSR"	"[R].dPTGQPGGELMLGGTDSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1008.99536"	"2016.98345"	"2016.98578"	"-1.16"	"-0.00117"	"12/194"	"12"	"194"	"378071.007995605"	"HCD"	"MS2"	"0"	"15.8"	"100.000"	"71.4418"	"24030"	"24030"	"24010"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"39.0"	""	"20.8"	""	"25.1"	""	"12.6"	"2.2"	"26.9"	"22.3"	""	"878"	"53"	"36.000"	"29.000"	"0.000200200206102619"	"16"	"0"	"4.34E-06"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGQPGGELMLGGTDSR"	"[R].dPTGQPGGELMLGGTDSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"672.99994"	"2016.98526"	"2016.98578"	"-0.26"	"-0.00017"	"20/194"	"20"	"194"	"2768794.59259033"	"HCD"	"MS2"	"2.954896"	"17.1"	"100.000"	"71.4384"	"24015"	"24015"	"24000"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.4"	""	"22.3"	""	"34.2"	""	"20.4"	""	"24.8"	"24.0"	""	"885"	"77"	"36.000"	"29.000"	"8.39292370135933E-07"	"17"	"0"	"1.805E-07"	"1.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGQPGGELMLGGTDSR"	"[R].dPTGQPGGELMLGGTDSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1008.99658"	"2016.98589"	"2016.98578"	"0.05"	"0.00005"	"9/194"	"9"	"194"	"207394.010314941"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"71.5860"	"24075"	"24075"	"24056"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.8"	""	"13.7"	""	"16.2"	""	"7.2"	""	"17.9"	"15.4"	""	"892"	"18"	"36.000"	"29.000"	"0.731703038846994"	"14"	"0"	"0.002445"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGQPGGELMLGGTDSR"	"[R].dPTGQPGGELMLGGTDSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"0.9767"	"0.0000"	"1"	"1"	"1"	"1008.99664"	"2016.98601"	"2016.98578"	"0.11"	"0.00011"	"11/194"	"11"	"194"	"192895.456176758"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"71.2771"	"23950"	"23950"	"23923"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.0"	""	"12.2"	""	"13.4"	""	"7.9"	""	"14.1"	"14.8"	""	"892"	"43"	"36.000"	"29.000"	"0.0023568658229173"	"16"	"0"	"0.0001063"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGQPGGELMLGGTDSR"	"[R].dPTGQPGGELMLGGTDSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.00031"	"2016.98636"	"2016.98578"	"0.29"	"0.00019"	"18/194"	"18"	"194"	"2704482.16717529"	"HCD"	"MS2"	"0"	"18.5"	"100.000"	"71.3540"	"23995"	"23995"	"23978"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"40.9"	""	"25.7"	""	"34.0"	""	"21.6"	""	"29.3"	"24.2"	""	"890"	"61"	"36.000"	"29.000"	"3.30643516364032E-05"	"16"	"0"	"1.552E-06"	"1.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHnGIVYTPk.[Q]"	"N-Term(TMT6plex); N7(Deamidated); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"673.03857"	"2017.10117"	"2017.10063"	"0.27"	"0.00018"	"11/138"	"11"	"138"	"582369.31237793"	"HCD"	"MS2"	"8.426414"	"20.2"	"100.000"	"70.6445"	"23691"	"23691"	"23669"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"36.1"	""	"32.3"	""	"24.4"	""	"28.3"	""	"40.5"	"30.8"	""	"1283"	"15"	"38.000"	"31.000"	"2.05209121286703"	"15"	"0"	"0.0002596"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHnGIVYTPk.[Q]"	"N-Term(TMT6plex); N7(Deamidated); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.03876"	"2017.10172"	"2017.10063"	"0.54"	"0.00036"	"10/138"	"10"	"138"	"577500.843933105"	"HCD"	"MS2"	"0"	"17.5"	"100.000"	"70.5066"	"23649"	"23649"	"23624"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"31.8"	""	"30.8"	""	"23.2"	""	"23.0"	""	"29.8"	"28.4"	""	"1287"	"36"	"38.000"	"31.000"	"0.0166935441952346"	"15"	"0"	"0.0002288"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQNNHYAMEDVATR"	"[K].lIQNNHYAmEDVATR.[R]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"674.00848"	"2020.01090"	"2020.01194"	"-0.52"	"-0.00035"	"15/144"	"15"	"144"	"1394678.96026611"	"HCD"	"MS2"	"0"	"50.2"	"100.000"	"46.6247"	"13961"	"13961"	"13949"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"59.0"	""	"55.2"	""	"60.7"	""	"97.2"	"5.3"	"93.1"	"106.1"	""	"998"	"32"	"36.000"	"29.000"	"0.0304158911722844"	"15"	"0"	"5.217E-05"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGNELLESSAGDDASSLR"	"[K].aGNELLESSAGDDASSLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"1011.00165"	"2020.99602"	"2020.99846"	"-1.21"	"-0.00122"	"5/190"	"5"	"190"	"94408.4532470703"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"70.2320"	"23537"	"23537"	"23512"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.4"	""	"4.7"	""	"5.9"	""	"5.6"	""	"7.6"	"7.9"	""	"888"	"24"	"36.000"	"29.000"	"0.173134242084385"	"16"	"0"	"0.0006048"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGNELLESSAGDDASSLR"	"[K].aGNELLESSAGDDASSLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.8793"	"0.0000"	"1"	"1"	"1"	"674.33740"	"2020.99765"	"2020.99846"	"-0.40"	"-0.00027"	"17/190"	"17"	"190"	"1082162.61077881"	"HCD"	"MS2"	"16.29995"	"15.7"	"100.000"	"70.1765"	"23514"	"23514"	"23499"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.4"	""	"20.0"	""	"18.2"	""	"22.9"	"1.8"	"29.5"	"30.8"	""	"885"	"58"	"36.000"	"29.000"	"6.41081545193557E-05"	"23"	"0"	"2.603E-07"	"1.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGNELLESSAGDDASSLR"	"[K].aGNELLESSAGDDASSLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"674.33807"	"2020.99967"	"2020.99846"	"0.60"	"0.00040"	"12/190"	"12"	"190"	"1202057.12792969"	"HCD"	"MS2"	"24.81229"	"21.2"	"100.000"	"70.2820"	"23543"	"23543"	"23525"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"27.0"	""	"25.3"	""	"27.2"	""	"37.8"	""	"40.0"	"45.5"	""	"898"	"65"	"36.000"	"29.000"	"1.49020611441122E-05"	"26"	"0"	"5.386E-08"	"1.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGNELLESSAGDDASSLR"	"[K].aGNELLESSAGDDASSLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"1011.00354"	"2020.99980"	"2020.99846"	"0.67"	"0.00067"	"5/190"	"5"	"190"	"109969.532775879"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"70.3119"	"23556"	"23556"	"23525"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.1"	""	"5.5"	""	"3.8"	""	"9.1"	""	"8.8"	"10.1"	""	"901"	"18"	"36.000"	"29.000"	"0.74764390180062"	"22"	"0"	"0.002012"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTNGTEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"1011.50165"	"2021.99602"	"2021.99773"	"-0.85"	"-0.00085"	"13/176"	"13"	"176"	"581188.708435059"	"HCD"	"MS2"	"0"	"24.5"	"100.000"	"82.7362"	"28583"	"28583"	"28565"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"55.6"	""	"28.7"	""	"32.3"	""	"37.1"	""	"36.5"	"42.2"	""	"932"	"51"	"36.000"	"29.000"	"0.000375306353598765"	"22"	"0"	"1.226E-05"	"0.884"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTNGTEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"674.67023"	"2021.99613"	"2021.99773"	"-0.79"	"-0.00053"	"16/176"	"16"	"176"	"578872.857727051"	"HCD"	"MS2"	"2.533323"	"7.8"	"100.000"	"82.9213"	"28654"	"28654"	"28648"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.7"	""	"10.0"	""	"9.3"	""	"10.1"	""	"15.8"	"16.5"	""	"929"	"48"	"36.000"	"29.000"	"0.000781602101367232"	"22"	"0"	"9.831E-06"	"0.904"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTNGTEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"1011.50226"	"2021.99724"	"2021.99773"	"-0.24"	"-0.00024"	"6/176"	"6"	"176"	"98347.0668334961"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"82.9321"	"28657"	"28657"	"28646"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.4"	""	"5.7"	""	"7.6"	""	"2.1"	""	"4.3"	"9.2"	""	"958"	"14"	"36.000"	"29.000"	"1.84644133321905"	"14"	"0"	"0.001461"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTNGTEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"1011.50232"	"2021.99736"	"2021.99773"	"-0.18"	"-0.00018"	"10/176"	"10"	"176"	"144346.927734375"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"82.4405"	"28465"	"28465"	"28447"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.8"	""	"9.7"	""	"9.0"	""	"9.6"	""	"7.1"	"11.3"	""	"955"	"27"	"36.000"	"29.000"	"0.0974929868579701"	"22"	"0"	"0.0002643"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTNGTEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"674.67065"	"2021.99741"	"2021.99773"	"-0.16"	"-0.00011"	"13/176"	"13"	"176"	"222595.230102539"	"HCD"	"MS2"	"2.244514"	"6.1"	"100.000"	"83.0107"	"28688"	"28688"	"28673"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.5"	""	"6.6"	""	"8.5"	""	"12.6"	""	"13.4"	"12.5"	""	"955"	"25"	"36.000"	"29.000"	"0.162544910582228"	"14"	"0"	"0.002211"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTNGTEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.8776"	"0.0000"	"1"	"1"	"1"	"674.67065"	"2021.99741"	"2021.99773"	"-0.16"	"-0.00011"	"16/176"	"16"	"176"	"699097.251403809"	"HCD"	"MS2"	"12.93181"	"7.1"	"100.000"	"82.4075"	"28449"	"28449"	"28428"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.1"	""	"9.6"	""	"9.9"	""	"9.5"	""	"11.0"	"16.6"	""	"955"	"49"	"36.000"	"29.000"	"0.000613724380123077"	"21"	"0"	"4.857E-06"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTNGTEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"674.67072"	"2021.99759"	"2021.99773"	"-0.07"	"-0.00005"	"12/176"	"12"	"176"	"377106.399230957"	"HCD"	"MS2"	"21.66837"	"5.3"	"100.000"	"82.3895"	"28445"	"28445"	"28418"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.1"	""	"6.2"	""	"7.9"	""	"10.4"	""	"9.4"	"10.9"	""	"953"	"54"	"36.000"	"29.000"	"0.000170632952279406"	"24"	"0"	"1.809E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTNGTEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.8810"	"0.0000"	"1"	"1"	"1"	"674.67078"	"2021.99778"	"2021.99773"	"0.02"	"0.00002"	"13/176"	"13"	"176"	"2827351.23724365"	"HCD"	"MS2"	"0"	"16.5"	"100.000"	"82.6534"	"28550"	"28550"	"28540"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"32.1"	""	"20.7"	""	"22.4"	""	"25.7"	""	"28.0"	"28.0"	""	"962"	"42"	"36.000"	"29.000"	"0.00314879999726359"	"20"	"0"	"2.382E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTNGTEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"1011.50256"	"2021.99785"	"2021.99773"	"0.06"	"0.00006"	"11/176"	"11"	"176"	"628854.445373535"	"HCD"	"MS2"	"0"	"27.1"	"100.000"	"82.6596"	"28550"	"28550"	"28538"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.9"	""	"37.0"	""	"35.6"	""	"42.9"	""	"42.1"	"42.7"	""	"962"	"36"	"36.000"	"29.000"	"0.0122784932658006"	"24"	"0"	"1.578E-05"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTNGTEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.8511"	"0.0000"	"1"	"1"	"1"	"674.67090"	"2021.99814"	"2021.99773"	"0.20"	"0.00014"	"15/176"	"15"	"176"	"2505176.27679443"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"82.7033"	"28567"	"28567"	"28549"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.1"	""	"20.2"	""	"19.0"	""	"30.9"	""	"28.3"	"32.6"	""	"969"	"47"	"36.000"	"29.000"	"0.0010006766854902"	"22"	"0"	"1.015E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTNGTEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"1011.50281"	"2021.99834"	"2021.99773"	"0.30"	"0.00030"	"5/176"	"5"	"176"	"92402.5528564453"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"82.3774"	"28437"	"28437"	"28417"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.5"	""	"6.8"	""	"6.6"	""	"4.9"	""	"6.8"	"6.6"	""	"970"	"17"	"36.000"	"29.000"	"0.983426118967821"	"17"	"0"	"0.002416"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.7925"	"0.0000"	"1"	"1"	"1"	"674.99792"	"2022.97922"	"2022.98175"	"-1.25"	"-0.00084"	"11/176"	"11"	"176"	"369633.383789063"	"HCD"	"MS2"	"4.787509"	"5.0"	"100.000"	"86.3696"	"30007"	"30007"	"29991"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.4"	""	"3.7"	""	"7.6"	""	"9.1"	""	"8.5"	"11.7"	""	"833"	"53"	"36.000"	"29.000"	"0.000212136307795322"	"27"	"0"	"7.474E-05"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"674.99817"	"2022.97995"	"2022.98175"	"-0.89"	"-0.00060"	"12/176"	"12"	"176"	"583084.950927734"	"HCD"	"MS2"	"5.76785"	"6.0"	"100.000"	"86.6503"	"30116"	"30116"	"30106"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.8"	""	"4.2"	""	"9.5"	""	"12.2"	""	"11.3"	"13.3"	""	"842"	"44"	"36.000"	"29.000"	"0.00178353688706857"	"20"	"0"	"4.697E-05"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"1011.99365"	"2022.98003"	"2022.98175"	"-0.85"	"-0.00086"	"11/176"	"11"	"176"	"236560.918029785"	"HCD"	"MS2"	"41.35149"	"9.6"	"100.000"	"89.0916"	"31064"	"31064"	"31046"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.3"	""	"12.7"	""	"15.0"	""	"12.5"	""	"19.6"	"15.3"	""	"844"	"25"	"36.000"	"29.000"	"0.139737333265653"	"20"	"0"	"0.0003551"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"1011.99402"	"2022.98076"	"2022.98175"	"-0.49"	"-0.00049"	"9/176"	"9"	"176"	"163550.913024902"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"86.6339"	"30109"	"30109"	"30095"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.4"	""	"9.2"	""	"11.6"	""	"11.8"	""	"12.1"	"12.6"	""	"841"	"48"	"36.000"	"29.000"	"0.000639390236252514"	""	"0"	"3.603E-05"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.7800"	"0.0000"	"1"	"1"	"1"	"674.99847"	"2022.98087"	"2022.98175"	"-0.43"	"-0.00029"	"11/176"	"11"	"176"	"478481.622192383"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"86.4041"	"30024"	"30024"	"30009"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.8"	""	"9.6"	""	"8.4"	""	"9.9"	""	"11.1"	"12.1"	""	"840"	"50"	"36.000"	"29.000"	"0.000376053201530829"	"25"	"0"	"0.0001322"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"674.99854"	"2022.98105"	"2022.98175"	"-0.34"	"-0.00023"	"12/176"	"12"	"176"	"563189.36340332"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"89.1520"	"31087"	"31087"	"31080"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.4"	""	"8.2"	""	"8.1"	""	"11.0"	""	"11.1"	"9.7"	""	"855"	"38"	"36.000"	"29.000"	"0.00746338970373516"	"23"	"0"	"5.738E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"1011.99420"	"2022.98113"	"2022.98175"	"-0.31"	"-0.00031"	"9/176"	"9"	"176"	"89772.9862670898"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"86.3485"	"29999"	"29999"	"29977"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.4"	""	"4.8"	""	"4.5"	""	"5.2"	""	"8.1"	"4.7"	""	"855"	"36"	"36.000"	"29.000"	"0.0104216412485264"	"19"	"0"	"0.0003085"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1011.99432"	"2022.98137"	"2022.98175"	"-0.19"	"-0.00019"	"5/176"	"5"	"176"	"216942.377502441"	"HCD"	"MS2"	"44.48727"	"9.0"	"100.000"	"89.0827"	"31063"	"31063"	"31051"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.1"	""	"16.1"	""	"13.9"	""	"14.0"	""	"12.7"	"14.8"	""	"854"	"15"	"36.000"	"29.000"	"1.23432030977006"	"13"	"0"	"0.0006566"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.6562"	"0.0000"	"1"	"1"	"1"	"674.99872"	"2022.98160"	"2022.98175"	"-0.07"	"-0.00005"	"11/176"	"11"	"176"	"152237.112243652"	"HCD"	"MS2"	"16.76524"	"3.6"	"100.000"	"88.8830"	"30983"	"30983"	"30964"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.5"	""	"3.3"	""	"1.9"	""	"9.7"	""	"5.0"	"8.6"	""	"853"	"32"	"36.000"	"29.000"	"0.0281137666321703"	"26"	"0"	"0.0006411"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"674.99872"	"2022.98160"	"2022.98175"	"-0.07"	"-0.00005"	"12/176"	"12"	"176"	"573156.58013916"	"HCD"	"MS2"	"6.682009"	"6.9"	"100.000"	"86.6804"	"30131"	"30131"	"30120"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.5"	""	"9.7"	"2.2"	"8.7"	""	"8.2"	""	"12.3"	"14.5"	""	"853"	"52"	"36.000"	"29.000"	"0.000241501056774815"	"24"	"0"	"1.249E-05"	"0.882"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"1011.99445"	"2022.98161"	"2022.98175"	"-0.06"	"-0.00007"	"7/176"	"7"	"176"	"104510.211486816"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"88.9853"	"31025"	"31025"	"31013"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.3"	""	"10.1"	""	"8.1"	""	"6.1"	""	"7.8"	"7.8"	""	"853"	"7"	"36.000"	"29.000"	"9.22399450369575"	"15"	"0.003111"	"0.03056"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"1011.99451"	"2022.98174"	"2022.98175"	"0.00"	"0.00000"	"12/176"	"12"	"176"	"198800.009399414"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"86.6175"	"30106"	"30106"	"30098"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.3"	""	"7.6"	""	"8.1"	""	"15.3"	""	"15.5"	"13.8"	""	"856"	"40"	"36.000"	"29.000"	"0.00405923102292785"	"20"	"0"	"7.676E-05"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"674.99878"	"2022.98178"	"2022.98175"	"0.02"	"0.00001"	"14/176"	"14"	"176"	"527654.197387695"	"HCD"	"MS2"	"0"	"5.4"	"100.000"	"89.2103"	"31112"	"31112"	"31103"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.2"	""	"8.7"	""	"7.9"	""	"11.6"	""	"9.8"	"7.2"	""	"856"	"46"	"36.000"	"29.000"	"0.00103620043200309"	"23"	"0"	"5.564E-05"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"1011.99487"	"2022.98247"	"2022.98175"	"0.36"	"0.00036"	"8/176"	"8"	"176"	"84056.9880981445"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"86.3554"	"30005"	"30005"	"29982"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.4"	""	"4.0"	""	"2.9"	""	"5.6"	""	"7.3"	"3.6"	""	"876"	"40"	"36.000"	"29.000"	"0.00458642304046294"	"26"	"0"	"0.0001035"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"674.99902"	"2022.98252"	"2022.98175"	"0.38"	"0.00026"	"14/176"	"14"	"176"	"245407.716674805"	"HCD"	"MS2"	"11.81374"	"4.6"	"100.000"	"88.9413"	"31008"	"31008"	"30996"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.4"	""	"5.1"	""	"6.0"	""	"10.1"	""	"6.5"	"9.4"	""	"879"	"58"	"36.000"	"29.000"	"6.72912939409252E-05"	"26"	"0"	"9.015E-06"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPAVQQDNVDEDLIR"	"[R].sPPAVQQDNVDEDLIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"675.68604"	"2025.04355"	"2025.04501"	"-0.72"	"-0.00049"	"11/164"	"11"	"164"	"963712.932983398"	"HCD"	"MS2"	"30.2186"	"12.6"	"100.000"	"72.7639"	"24555"	"24555"	"24530"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.9"	""	"17.2"	""	"18.2"	""	"17.7"	""	"18.9"	"25.5"	""	"1133"	"40"	"37.000"	"30.000"	"0.00628347532846151"	"19"	"0"	"0.0001398"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPAVQQDNVDEDLIR"	"[R].sPPAVQQDNVDEDLIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"675.68658"	"2025.04520"	"2025.04501"	"0.09"	"0.00006"	"14/164"	"14"	"164"	"663335.897644043"	"HCD"	"MS2"	"8.141793"	"10.6"	"100.000"	"72.5642"	"24487"	"24487"	"24465"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.5"	""	"15.2"	""	"15.2"	""	"18.1"	""	"15.3"	"20.8"	""	"1138"	"32"	"37.000"	"30.000"	"0.0341281122389385"	"15"	"0"	"0.0002641"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEEDLTGIDDRK"	"[K].eFEEDLTGIDDRk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P02696"	"Retinol-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Rbp1 PE=1 SV=2"	"P02696"	"Retinol-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Rbp1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"675.68939"	"2025.05362"	"2025.05407"	"-0.22"	"-0.00015"	"10/118"	"10"	"118"	"535298.353942871"	"HCD"	"MS2"	"16.16482"	"31.9"	"100.000"	"77.4152"	"26437"	"26437"	"26416"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"65.5"	""	"51.9"	""	"48.1"	""	"44.5"	""	"39.0"	"53.3"	""	"1204"	"12"	"37.000"	"30.000"	"3.8423461868671"	"13"	"0.003449"	"0.03349"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEEDLTGIDDRK"	"[K].eFEEDLTGIDDRk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P02696"	"Retinol-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Rbp1 PE=1 SV=2"	"P02696"	"Retinol-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Rbp1 PE=1 SV=2"	"1"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"675.68958"	"2025.05417"	"2025.05407"	"0.05"	"0.00003"	"10/118"	"10"	"118"	"602319.171020508"	"HCD"	"MS2"	"5.387748"	"38.8"	"100.000"	"77.4438"	"26459"	"26459"	"26439"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.5"	""	"55.1"	""	"58.3"	""	"53.5"	""	"52.1"	"67.6"	""	"1203"	"14"	"37.000"	"30.000"	"2.55997445499946"	"18"	"0.003922"	"0.0398"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGQPGGELMLGGTDSR"	"[R].dPTGQPGGELmLGGTDSR.[Y]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"1016.99268"	"2032.97807"	"2032.98070"	"-1.29"	"-0.00131"	"9/194"	"9"	"194"	"111279.425415039"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"61.3602"	"19919"	"19919"	"19889"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.9"	""	"4.5"	""	"4.6"	""	"11.5"	""	"6.2"	"8.0"	""	"782"	"20"	"35.000"	"28.000"	"0.436693529882199"	"16"	"0.0002479"	"0.006081"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGQPGGELMLGGTDSR"	"[R].dPTGQPGGELmLGGTDSR.[Y]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1016.99298"	"2032.97869"	"2032.98070"	"-0.99"	"-0.00101"	"15/194"	"15"	"194"	"255858.765258789"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"61.6595"	"20041"	"20041"	"20017"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.5"	""	"11.2"	""	"16.7"	""	"27.9"	""	"13.8"	"15.0"	""	"779"	"28"	"35.000"	"28.000"	"0.0664519090516716"	"14"	"0"	"0.001039"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGQPGGELMLGGTDSR"	"[R].dPTGQPGGELmLGGTDSR.[Y]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"1016.99329"	"2032.97930"	"2032.98070"	"-0.69"	"-0.00070"	"8/194"	"8"	"194"	"143248.939697266"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"61.5933"	"20030"	"20030"	"20001"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.9"	""	"8.8"	""	"9.0"	""	"14.2"	""	"15.3"	"6.9"	""	"781"	"5"	"35.000"	"28.000"	"11.1846149724852"	"14"	"0.001036"	"0.01352"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGQPGGELMLGGTDSR"	"[R].dPTGQPGGELmLGGTDSR.[Y]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"678.33136"	"2032.97953"	"2032.98070"	"-0.58"	"-0.00039"	"19/194"	"19"	"194"	"2432977.56777954"	"HCD"	"MS2"	"21.17483"	"42.0"	"100.000"	"61.4892"	"19971"	"19971"	"19953"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"62.6"	""	"40.8"	""	"57.5"	""	"79.9"	"2.3"	"83.2"	"71.4"	""	"780"	"42"	"35.000"	"28.000"	"0.00230709037328435"	"16"	"0"	"1.05E-05"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGQPGGELMLGGTDSR"	"[R].dPTGQPGGELmLGGTDSR.[Y]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"3"	"3"	"0.9750"	"0.0000"	"1"	"1"	"1"	"678.33154"	"2032.98008"	"2032.98070"	"-0.31"	"-0.00021"	"14/194"	"14"	"194"	"2116472.88580322"	"HCD"	"MS2"	"28.59171"	"35.5"	"100.000"	"61.2943"	"19907"	"19907"	"19889"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"45.7"	""	"41.8"	""	"48.3"	""	"58.9"	"1.6"	"78.2"	"62.9"	""	"777"	"40"	"35.000"	"28.000"	"0.00410573602329507"	"16"	"0"	"2.241E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGQPGGELMLGGTDSR"	"[R].dPTGQPGGELmLGGTDSR.[Y]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"1016.99390"	"2032.98052"	"2032.98070"	"-0.09"	"-0.00009"	"5/194"	"5"	"194"	"203579.472106934"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"61.2782"	"19901"	"19901"	"19873"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.0"	""	"13.6"	""	"12.5"	""	"21.8"	""	"16.9"	"14.3"	""	"791"	"11"	"35.000"	"28.000"	"3.31242831081182"	"14"	"0"	"0.00357"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEVKPPPGRPQPDSGR"	"[-].mEVkPPPGRPQPDSGR.[R]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K4(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"1"	"1"	"679.02411"	"2035.05777"	"2035.05922"	"-0.71"	"-0.00048"	"4/168"	"4"	"168"	"566318.072875977"	"HCD"	"MS2"	"26.45975"	"18.4"	"100.000"	"31.7329"	"7909"	"7909"	"7883"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.4"	""	"19.7"	""	"13.8"	""	"40.7"	""	"39.8"	"32.5"	""	"1298"	"0"	"38.000"	"31.000"	"63.1312948231251"	"13"	"0.006129"	"0.06984"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHEGEIGDLALGPDGK"	"[K].aHEGEIGDLALGPDGk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q9WTV0"	"Prolactin regulatory element-binding protein OS=Rattus norvegicus OX=10116 GN=Preb PE=1 SV=2"	"Q9WTV0"	"Prolactin regulatory element-binding protein OS=Rattus norvegicus OX=10116 GN=Preb PE=1 SV=2"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"679.70551"	"2037.10196"	"2037.10169"	"0.13"	"0.00009"	"16/142"	"16"	"142"	"722206.888061523"	"HCD"	"MS2"	"29.49158"	"20.6"	"100.000"	"69.8398"	"23377"	"23377"	"23358"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.6"	""	"26.3"	""	"30.6"	""	"34.4"	"0.4"	"36.5"	"40.4"	""	"1234"	"42"	"37.000"	"30.000"	"0.00348566113459191"	"19"	"0"	"1.026E-06"	"1.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHEGEIGDLALGPDGK"	"[K].aHEGEIGDLALGPDGk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q9WTV0"	"Prolactin regulatory element-binding protein OS=Rattus norvegicus OX=10116 GN=Preb PE=1 SV=2"	"Q9WTV0"	"Prolactin regulatory element-binding protein OS=Rattus norvegicus OX=10116 GN=Preb PE=1 SV=2"	"0"	"3"	"3"	"0.8163"	"0.0000"	"1"	"1"	"1"	"679.70679"	"2037.10581"	"2037.10169"	"2.02"	"0.00137"	"13/142"	"13"	"142"	"593231.130126953"	"HCD"	"MS2"	"13.64232"	"19.5"	"100.000"	"69.8899"	"23384"	"23384"	"23355"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.0"	""	"21.7"	""	"29.4"	""	"31.7"	""	"38.0"	"36.5"	""	"1220"	"49"	"37.000"	"30.000"	"0.000726657624896699"	"25"	"0"	"8.093E-06"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDTNYLFMGDYVDR"	"[K].sPDTNYLFmGDYVDR.[G]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"2"	"P62716"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1"	"P62716; P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"679.98566"	"2037.94242"	"2037.94252"	"-0.05"	"-0.00004"	"10/158"	"10"	"158"	"136754.838623047"	"HCD"	"MS2"	"10.34412"	"4.4"	"100.000"	"91.2631"	"31909"	"31909"	"31900"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.7"	""	"6.1"	""	"7.4"	""	"6.8"	""	"6.4"	"8.8"	""	"489"	"12"	"33.000"	"26.000"	"1.6798823358348"	"13"	"0.001374"	"0.0171"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDTNYLFMGDYVDR"	"[K].sPDTNYLFmGDYVDR.[G]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"2"	"P62716"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1"	"P62716; P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"679.98584"	"2037.94297"	"2037.94252"	"0.22"	"0.00015"	"10/158"	"10"	"158"	"135487.617553711"	"HCD"	"MS2"	"7.470879"	"3.4"	"100.000"	"91.3194"	"31935"	"31935"	"31924"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.2"	""	"4.4"	""	"5.9"	""	"5.6"	""	"7.1"	"5.0"	""	"491"	"22"	"33.000"	"26.000"	"0.164456671611757"	"14"	"0.000936"	"0.01132"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPAEDMEEEQAFK"	"[K].rPAEDMEEEQAFk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"680.01489"	"2038.03012"	"2038.03156"	"-0.71"	"-0.00048"	"8/130"	"8"	"130"	"432969.110107422"	"HCD"	"MS2"	"0"	"21.0"	"100.000"	"53.7040"	"16837"	"16837"	"16817"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"29.0"	""	"18.0"	""	"23.0"	""	"36.0"	""	"46.9"	"48.6"	""	"1125"	"27"	"37.000"	"30.000"	"0.106935653245686"	"18"	"0"	"0.0001709"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPAEDMEEEQAFK"	"[K].rPAEDMEEEQAFk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"680.01495"	"2038.03031"	"2038.03156"	"-0.62"	"-0.00042"	"7/130"	"7"	"130"	"1001975.01824951"	"HCD"	"MS2"	"4.146646"	"41.9"	"100.000"	"53.3211"	"16692"	"16692"	"16669"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.1"	""	"32.1"	""	"40.8"	""	"71.0"	""	"110.3"	"94.0"	""	"1122"	"32"	"37.000"	"30.000"	"0.0326559905169459"	"20"	"0"	"2.968E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAEGANGPTTPEADK"	"[K].iIAEGANGPTTPEADk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"1021.55902"	"2042.11077"	"2042.11701"	"-3.06"	"-0.00312"	"7/160"	"7"	"160"	"100276.200805664"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"66.7967"	"22138"	"22138"	"22109"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.6"	""	"7.5"	""	"6.4"	""	"14.1"	""	"10.1"	"8.8"	""	"1178"	"10"	"37.000"	"30.000"	"6.23900444129423"	"16"	"0.001465"	"0.0182"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAEGANGPTTPEADK"	"[K].iIAEGANGPTTPEADk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"681.37659"	"2042.11521"	"2042.11701"	"-0.88"	"-0.00060"	"12/160"	"12"	"160"	"914707.13079834"	"HCD"	"MS2"	"17.15654"	"33.7"	"100.000"	"66.7267"	"22094"	"22094"	"22068"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"56.1"	""	"38.2"	""	"47.9"	""	"53.9"	"0.9"	"63.9"	"58.3"	""	"1193"	"52"	"37.000"	"30.000"	"0.000336209861700182"	"20"	"0"	"6.101E-06"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAEGANGPTTPEADK"	"[K].iIAEGANGPTTPEADk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.9833"	"0.0000"	"1"	"1"	"1"	"681.37683"	"2042.11594"	"2042.11701"	"-0.52"	"-0.00036"	"15/160"	"15"	"160"	"1344498.56768799"	"HCD"	"MS2"	"12.74885"	"46.8"	"100.000"	"66.6679"	"22085"	"22085"	"22061"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"73.1"	""	"59.9"	""	"51.0"	""	"73.5"	""	"96.5"	"92.8"	""	"1186"	"60"	"37.000"	"30.000"	"6.1809423563023E-05"	"18"	"0"	"1.57E-06"	"1.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAEGANGPTTPEADK"	"[K].iIAEGAnGPTTPEADk.[I]"	"N-Term(TMT6plex); N7(Deamidated); K16(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.70447"	"2043.09885"	"2043.10102"	"-1.06"	"-0.00072"	"12/160"	"12"	"160"	"302000.209533691"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"71.0495"	"23857"	"23857"	"23829"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.9"	""	"13.5"	""	"17.5"	""	"17.9"	""	"22.3"	"24.2"	""	"1195"	"36"	"37.000"	"30.000"	"0.0165324763313338"	"15"	"0"	"1.104E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAEGANGPTTPEADK"	"[K].iIAEGAnGPTTPEADk.[I]"	"N-Term(TMT6plex); N7(Deamidated); K16(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.8833"	"0.0000"	"1"	"1"	"1"	"681.70465"	"2043.09940"	"2043.10102"	"-0.79"	"-0.00054"	"15/160"	"15"	"160"	"847809.006652832"	"HCD"	"MS2"	"11.62506"	"25.5"	"100.000"	"70.1413"	"23486"	"23486"	"23461"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"32.6"	""	"25.5"	""	"30.0"	""	"44.1"	""	"56.6"	"55.4"	""	"1191"	"60"	"37.000"	"30.000"	"6.52952765803266E-05"	"24"	"0"	"3.484E-06"	"1.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAEGANGPTTPEADK"	"[K].iIAEGAnGPTTPEADk.[I]"	"N-Term(TMT6plex); N7(Deamidated); K16(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"681.70477"	"2043.09977"	"2043.10102"	"-0.61"	"-0.00042"	"14/160"	"14"	"160"	"283253.778991699"	"HCD"	"MS2"	"20.7089"	"11.0"	"100.000"	"69.8024"	"23348"	"23348"	"23323"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.9"	""	"15.1"	""	"17.0"	""	"15.2"	""	"21.3"	"22.6"	""	"1187"	"26"	"37.000"	"30.000"	"0.163840295766678"	"15"	"0"	"0.0002061"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAEGANGPTTPEADK"	"[K].iIAEGAnGPTTPEADk.[I]"	"N-Term(TMT6plex); N7(Deamidated); K16(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.9821"	"0.0000"	"1"	"1"	"1"	"681.70508"	"2043.10068"	"2043.10102"	"-0.17"	"-0.00011"	"14/160"	"14"	"160"	"647638.842285156"	"HCD"	"MS2"	"15.20163"	"20.2"	"100.000"	"69.8836"	"23395"	"23395"	"23374"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"34.3"	""	"21.2"	""	"21.4"	""	"31.8"	""	"40.7"	"43.8"	""	"1176"	"56"	"37.000"	"30.000"	"0.000148039403352221"	"17"	"0"	"6.963E-06"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAEGANGPTTPEADK"	"[K].iIAEGAnGPTTPEADk.[I]"	"N-Term(TMT6plex); N7(Deamidated); K16(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.9808"	"0.0000"	"1"	"1"	"1"	"681.70563"	"2043.10233"	"2043.10102"	"0.64"	"0.00044"	"14/160"	"14"	"160"	"310675.427856445"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"70.8820"	"23802"	"23802"	"23779"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.3"	""	"15.4"	""	"16.3"	""	"23.7"	""	"27.2"	"30.6"	""	"1163"	"52"	"37.000"	"30.000"	"0.000353630503243575"	"17"	"0"	"7.975E-06"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMDPNIVGSEHYDVAR"	"[R].iMDPNIVGSEHYDVAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.6200"	"0.0000"	"1"	"1"	"1"	"682.34821"	"2045.03006"	"2045.03234"	"-1.11"	"-0.00076"	"16/162"	"16"	"162"	"985688.212280273"	"HCD"	"MS2"	"17.2539"	"11.8"	"100.000"	"78.1179"	"26728"	"26728"	"26715"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.2"	""	"19.9"	""	"18.2"	""	"19.7"	""	"18.8"	"17.5"	""	"1033"	"50"	"37.000"	"30.000"	"0.000476508142125435"	""	"0"	"1.854E-06"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMDPNIVGSEHYDVAR"	"[R].iMDPNIVGSEHYDVAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.8082"	"0.0000"	"1"	"1"	"1"	"682.34845"	"2045.03080"	"2045.03234"	"-0.76"	"-0.00051"	"16/162"	"16"	"162"	"471832.283813477"	"HCD"	"MS2"	"2.458661"	"7.9"	"100.000"	"78.4275"	"26852"	"26852"	"26839"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.7"	""	"10.2"	""	"13.8"	""	"8.0"	""	"15.7"	"16.9"	""	"1039"	"73"	"37.000"	"30.000"	"2.49796041519634E-06"	""	"0"	"7.011E-07"	"1.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMDPNIVGSEHYDVAR"	"[R].iMDPNIVGSEHYDVAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"682.34894"	"2045.03226"	"2045.03234"	"-0.04"	"-0.00003"	"17/162"	"17"	"162"	"1141649.0647583"	"HCD"	"MS2"	"11.54849"	"14.4"	"100.000"	"78.1719"	"26742"	"26742"	"26729"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.1"	""	"20.5"	""	"23.1"	""	"21.3"	""	"26.2"	"25.3"	""	"1050"	"48"	"37.000"	"30.000"	"0.000925037424366106"	""	"0"	"1.322E-06"	"1.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAESGELHGLTTDEK"	"[K].tAESGELHGLTTDEk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"0"	"3"	"3"	"0.6744"	"0.0000"	"1"	"1"	"1"	"682.69604"	"2046.07358"	"2046.07553"	"-0.95"	"-0.00065"	"15/138"	"15"	"138"	"1080159.68383789"	"HCD"	"MS2"	"2.213523"	"43.5"	"100.000"	"51.3098"	"15871"	"15871"	"15847"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"54.7"	""	"51.3"	""	"53.9"	""	"91.1"	"0.5"	"82.4"	"78.6"	""	"1240"	"43"	"37.000"	"30.000"	"0.0030717911829897"	"29"	"0"	"3.834E-05"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAESGELHGLTTDEK"	"[K].tAESGELHGLTTDEk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"682.69733"	"2046.07743"	"2046.07553"	"0.92"	"0.00063"	"16/138"	"16"	"138"	"1092510.82836914"	"HCD"	"MS2"	"10.74016"	"41.8"	"100.000"	"51.6262"	"15989"	"15989"	"15963"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"59.7"	""	"36.4"	""	"51.6"	""	"85.7"	""	"90.8"	"75.3"	""	"1253"	"51"	"37.000"	"30.000"	"0.000457005130174487"	"30"	"0"	"6.318E-06"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"683.70398"	"2049.09739"	"2049.10003"	"-1.29"	"-0.00088"	"13/148"	"13"	"148"	"246170.720336914"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"75.1030"	"25500"	"25500"	"25473"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.6"	""	"6.5"	""	"5.0"	""	"10.1"	""	"7.1"	"10.2"	""	"1347"	"37"	"38.000"	"31.000"	"0.0136250341683982"	"23"	"0"	"3E-05"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"683.70416"	"2049.09793"	"2049.10003"	"-1.02"	"-0.00070"	"11/148"	"11"	"148"	"352759.418823242"	"HCD"	"MS2"	"14.66499"	"7.7"	"100.000"	"74.4715"	"25262"	"25262"	"25244"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.4"	""	"8.8"	""	"11.9"	""	"12.7"	""	"12.5"	"14.5"	""	"1351"	"27"	"38.000"	"31.000"	"0.136654945519717"	"17"	"0"	"0.000182"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"683.70435"	"2049.09848"	"2049.10003"	"-0.75"	"-0.00051"	"14/148"	"14"	"148"	"285407.724914551"	"HCD"	"MS2"	"21.43349"	"6.5"	"100.000"	"74.8567"	"25417"	"25417"	"25398"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.3"	""	"6.7"	""	"6.9"	""	"11.3"	""	"11.5"	"18.0"	""	"1351"	"30"	"38.000"	"31.000"	"0.0680182342309394"	"15"	"0"	"0.000207"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8542"	"0.0000"	"1"	"1"	"1"	"683.70502"	"2049.10050"	"2049.10003"	"0.23"	"0.00016"	"15/148"	"15"	"148"	"359531.95892334"	"HCD"	"MS2"	"18.01813"	"5.8"	"100.000"	"74.6504"	"25321"	"25321"	"25301"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.3"	""	"6.8"	""	"9.9"	""	"8.5"	""	"9.3"	"11.4"	""	"1350"	"48"	"38.000"	"31.000"	"0.000973427862279286"	"22"	"0"	"4.58E-06"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMGLPTPEDNLDHYR"	"[R].yMGLPTPEDNLDHYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"684.00098"	"2049.98838"	"2049.99014"	"-0.86"	"-0.00059"	"11/134"	"11"	"134"	"237983.217102051"	"HCD"	"MS2"	"10.57937"	"4.9"	"100.000"	"84.0197"	"29084"	"29084"	"29069"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.3"	""	"5.7"	""	"8.9"	""	"6.3"	""	"8.0"	"11.4"	""	"837"	"23"	"36.000"	"29.000"	"0.190851449325617"	"18"	"0.0008629"	"0.01031"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMGLPTPEDNLDHYR"	"[R].yMGLPTPEDNLDHYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.00116"	"2049.98893"	"2049.99014"	"-0.59"	"-0.00041"	"13/134"	"13"	"134"	"508465.912902832"	"HCD"	"MS2"	"14.36722"	"9.7"	"100.000"	"83.7262"	"28968"	"28968"	"28957"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.0"	""	"9.6"	""	"10.6"	""	"15.8"	""	"22.3"	"21.8"	""	"852"	"23"	"36.000"	"29.000"	"0.196974315116085"	"14"	"0"	"0.0005118"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMGLPTPEDNLDHYR"	"[R].yMGLPTPEDNLDHYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"684.00134"	"2049.98948"	"2049.99014"	"-0.33"	"-0.00022"	"13/134"	"13"	"134"	"507270.443725586"	"HCD"	"MS2"	"11.23082"	"9.6"	"100.000"	"83.7929"	"28992"	"28992"	"28979"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.4"	""	"11.7"	""	"8.4"	""	"17.3"	""	"20.3"	"25.1"	""	"851"	"29"	"36.000"	"29.000"	"0.0491925759052738"	"18"	"0"	"0.001697"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNQWVGYDDPESVK"	"[K].gNQWVGYDDPESVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9WTV1"	"Chitinase-3-like protein 1 OS=Rattus norvegicus OX=10116 GN=Chi3l1 PE=2 SV=3"	"Q9WTV1"	"Chitinase-3-like protein 1 OS=Rattus norvegicus OX=10116 GN=Chi3l1 PE=2 SV=3"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"684.68518"	"2052.04099"	"2052.04384"	"-1.39"	"-0.00095"	"8/136"	"8"	"136"	"209380.356384277"	"HCD"	"MS2"	"20.58853"	"8.1"	"100.000"	"78.3070"	"26804"	"26804"	"26779"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.8"	""	"10.6"	""	"10.4"	""	"16.5"	""	"13.9"	"12.5"	""	"1154"	"18"	"37.000"	"30.000"	"0.873324840347693"	"14"	"0"	"0.0008934"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNQWVGYDDPESVK"	"[K].gNQWVGYDDPESVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9WTV1"	"Chitinase-3-like protein 1 OS=Rattus norvegicus OX=10116 GN=Chi3l1 PE=2 SV=3"	"Q9WTV1"	"Chitinase-3-like protein 1 OS=Rattus norvegicus OX=10116 GN=Chi3l1 PE=2 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.68555"	"2052.04209"	"2052.04384"	"-0.85"	"-0.00058"	"13/136"	"13"	"136"	"236945.376342773"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"78.4367"	"26850"	"26850"	"26827"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.1"	""	"10.3"	""	"9.8"	""	"18.8"	""	"12.1"	"12.9"	""	"1158"	"39"	"37.000"	"30.000"	"0.00804782573472531"	"15"	"0"	"0.0004412"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMDPNIVGSEHYDVAR"	"[R].imDPNIVGSEHYDVAR.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"687.68036"	"2061.02652"	"2061.02726"	"-0.36"	"-0.00024"	"8/162"	"8"	"162"	"1515699.76660156"	"HCD"	"MS2"	"16.62291"	"29.4"	"100.000"	"65.8151"	"21737"	"21737"	"21718"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.9"	""	"45.8"	""	"38.4"	""	"46.8"	""	"53.1"	"61.0"	""	"1013"	"35"	"37.000"	"30.000"	"0.0144736961021941"	"15"	"0"	"4.572E-06"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQEQHPEEELIKTK"	"[K].lIQEQHPEEELIKTK.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"0.1429"	"0.0000"	"1"	"1"	"1"	"688.72845"	"2064.17081"	"2064.15384"	"8.22"	"0.00566"	"10/156"	"10"	"156"	"628798.890075684"	"HCD"	"MS2"	"17.98429"	"27.5"	"100.000"	"75.0872"	"25493"	"25493"	"25473"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"34.5"	""	"26.8"	""	"26.0"	""	"46.5"	""	"67.0"	"63.3"	""	"999"	"28"	"36.000"	"29.000"	"0.0725329752985077"	""	"0.004942"	"0.05282"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQEQHPEEELIKTK"	"[K].lIQEQHPEEELIKTK.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"0.0909"	"0.0000"	"1"	"1"	"1"	"688.72925"	"2064.17319"	"2064.15384"	"9.38"	"0.00645"	"13/156"	"13"	"156"	"1168011.30072021"	"HCD"	"MS2"	"9.406219"	"39.8"	"100.000"	"74.7863"	"25376"	"25376"	"25359"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"58.6"	""	"49.2"	""	"43.9"	""	"57.7"	"0.3"	"79.1"	"89.1"	""	"990"	"44"	"36.000"	"29.000"	"0.00206826031490078"	""	"0.000936"	"0.01258"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQEQHPEEELIKTK"	"[K].lIQEQHPEEELIKTK.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"0.1290"	"0.0000"	"1"	"1"	"1"	"688.72931"	"2064.17337"	"2064.15384"	"9.47"	"0.00651"	"10/156"	"10"	"156"	"694604.255187988"	"HCD"	"MS2"	"9.417288"	"28.0"	"100.000"	"74.9293"	"25441"	"25441"	"25422"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.0"	""	"31.2"	""	"32.9"	""	"44.9"	""	"57.5"	"69.2"	""	"989"	"31"	"36.000"	"29.000"	"0.0378587522117616"	""	"0.008522"	"0.1047"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQEQHPEEELIKTK"	"[K].lIQEQHPEEELIKTK.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"0.1333"	"0.0000"	"1"	"1"	"1"	"688.72943"	"2064.17374"	"2064.15384"	"9.64"	"0.00663"	"12/156"	"12"	"156"	"925116.77557373"	"HCD"	"MS2"	"9.043012"	"32.7"	"100.000"	"74.6283"	"25325"	"25325"	"25310"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"50.0"	""	"36.5"	""	"30.8"	""	"55.8"	""	"64.1"	"73.6"	""	"989"	"30"	"36.000"	"29.000"	"0.054096142312155"	""	"0.003922"	"0.03979"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"689.03595"	"2065.09330"	"2065.09494"	"-0.80"	"-0.00055"	"17/148"	"17"	"148"	"820334.440856934"	"HCD"	"MS2"	"11.13828"	"17.1"	"100.000"	"63.4712"	"20788"	"20788"	"20763"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"14.8"	""	"24.6"	""	"19.0"	""	"36.2"	""	"33.2"	"35.5"	""	"1334"	"44"	"38.000"	"31.000"	"0.00267378100657411"	"22"	"0"	"4.999E-07"	"1.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.6500"	"0.0000"	"1"	"1"	"1"	"689.03601"	"2065.09348"	"2065.09494"	"-0.71"	"-0.00049"	"17/148"	"17"	"148"	"722874.072753906"	"HCD"	"MS2"	"24.08146"	"21.4"	"100.000"	"63.8144"	"20928"	"20928"	"20901"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.7"	""	"23.1"	""	"26.4"	""	"37.2"	""	"47.5"	"46.6"	""	"1330"	"40"	"38.000"	"31.000"	"0.0059541756909048"	"29"	"0"	"3.829E-06"	"0.993"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"689.03607"	"2065.09366"	"2065.09494"	"-0.62"	"-0.00043"	"14/148"	"14"	"148"	"758439.988037109"	"HCD"	"MS2"	"14.39997"	"22.0"	"100.000"	"63.8921"	"20945"	"20945"	"20919"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.4"	""	"27.0"	""	"24.9"	""	"43.7"	""	"51.3"	"42.7"	""	"1326"	"34"	"38.000"	"31.000"	"0.0241275668952338"	"21"	"0"	"0.0002797"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"689.03619"	"2065.09403"	"2065.09494"	"-0.44"	"-0.00030"	"16/148"	"16"	"148"	"1167020.1204834"	"HCD"	"MS2"	"34.61974"	"23.2"	"100.000"	"63.1693"	"20665"	"20665"	"20649"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.6"	""	"28.7"	""	"22.3"	""	"48.0"	""	"52.2"	"47.8"	""	"1328"	"36"	"38.000"	"31.000"	"0.015352110206766"	"30"	"0"	"1.279E-07"	"1.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7576"	"0.0000"	"1"	"1"	"1"	"689.03632"	"2065.09439"	"2065.09494"	"-0.26"	"-0.00018"	"16/148"	"16"	"148"	"1019238.40802002"	"HCD"	"MS2"	"29.4213"	"23.9"	"100.000"	"63.2813"	"20696"	"20696"	"20673"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.8"	""	"22.1"	""	"26.3"	""	"51.6"	"0.6"	"48.3"	"46.1"	""	"1334"	"33"	"38.000"	"31.000"	"0.0322200220960528"	"23"	"0"	"4.18E-06"	"0.985"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"689.03638"	"2065.09458"	"2065.09494"	"-0.18"	"-0.00012"	"17/148"	"17"	"148"	"705704.273742676"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"63.5787"	"20817"	"20817"	"20795"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.8"	""	"15.6"	""	"20.9"	""	"34.0"	""	"28.4"	"30.6"	""	"1331"	"38"	"38.000"	"31.000"	"0.010072750108343"	"21"	"0"	"3.246E-07"	"1.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"689.03650"	"2065.09494"	"2065.09494"	"0.00"	"0.00000"	"16/148"	"16"	"148"	"912286.098632813"	"HCD"	"MS2"	"9.786606"	"27.8"	"100.000"	"62.5060"	"20396"	"20396"	"20375"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.7"	""	"31.9"	""	"37.7"	""	"50.6"	""	"53.0"	"54.9"	""	"1326"	"31"	"38.000"	"31.000"	"0.0590899371982673"	"19"	"0"	"4.62E-07"	"1.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"689.03699"	"2065.09641"	"2065.09494"	"0.71"	"0.00049"	"18/148"	"18"	"148"	"1070891.34613037"	"HCD"	"MS2"	"36.9002"	"32.5"	"100.000"	"62.5629"	"20403"	"20403"	"20381"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"46.3"	""	"40.6"	""	"50.9"	""	"50.8"	""	"64.2"	"57.6"	""	"1337"	"42"	"38.000"	"31.000"	"0.00441673569993079"	"25"	"0"	"4.473E-07"	"1.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMGLPTPEDNLDHYR"	"[R].ymGLPTPEDNLDHYR.[N]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"689.33203"	"2065.98154"	"2065.98506"	"-1.70"	"-0.00117"	"12/134"	"12"	"134"	"322091.488586426"	"HCD"	"MS2"	"19.15755"	"9.7"	"100.000"	"72.6509"	"24509"	"24509"	"24483"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.5"	""	"9.2"	""	"13.3"	""	"15.8"	""	"21.3"	"20.8"	""	"646"	"34"	"35.000"	"28.000"	"0.0121955817668909"	"15"	"0"	"0.0004849"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMGLPTPEDNLDHYR"	"[R].ymGLPTPEDNLDHYR.[N]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"689.33282"	"2065.98392"	"2065.98506"	"-0.55"	"-0.00038"	"13/134"	"13"	"134"	"599379.616577148"	"HCD"	"MS2"	"4.771327"	"8.6"	"100.000"	"73.2319"	"24745"	"24745"	"24731"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.3"	""	"6.5"	""	"10.0"	""	"16.6"	""	"18.8"	"21.4"	""	"667"	"39"	"35.000"	"28.000"	"0.00449879121344316"	"15"	"0"	"0.0001162"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMGLPTPEDNLDHYR"	"[R].ymGLPTPEDNLDHYR.[N]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"689.33289"	"2065.98410"	"2065.98506"	"-0.46"	"-0.00032"	"15/134"	"15"	"134"	"715281.804321289"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"72.9417"	"24627"	"24627"	"24607"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.1"	""	"8.2"	""	"12.1"	""	"19.4"	""	"23.6"	"19.4"	""	"667"	"37"	"35.000"	"28.000"	"0.0071465401547354"	"15"	"0"	"2.958E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMGLPTPEDNLDHYR"	"[R].ymGLPTPEDNLDHYR.[N]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"689.33295"	"2065.98429"	"2065.98506"	"-0.37"	"-0.00026"	"12/134"	"12"	"134"	"291228.895874023"	"HCD"	"MS2"	"4.947162"	"5.7"	"100.000"	"73.2099"	"24749"	"24749"	"24727"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.9"	""	"4.9"	""	"5.0"	""	"9.9"	""	"15.4"	"11.6"	""	"664"	"35"	"35.000"	"28.000"	"0.011725681237093"	"15"	"0"	"0.0001288"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMGLPTPEDNLDHYR"	"[R].ymGLPTPEDNLDHYR.[N]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"689.33295"	"2065.98429"	"2065.98506"	"-0.37"	"-0.00026"	"15/134"	"15"	"134"	"736752.042053223"	"HCD"	"MS2"	"2.254235"	"8.2"	"100.000"	"72.9147"	"24630"	"24630"	"24609"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.1"	""	"11.3"	""	"8.1"	""	"17.2"	""	"12.4"	"25.0"	""	"664"	"45"	"35.000"	"28.000"	"0.000944361087672708"	"15"	"0"	"8.264E-06"	"0.921"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMGLPTPEDNLDHYR"	"[R].ymGLPTPEDNLDHYR.[N]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"689.33307"	"2065.98465"	"2065.98506"	"-0.20"	"-0.00013"	"9/134"	"9"	"134"	"529452.928405762"	"HCD"	"MS2"	"5.199472"	"9.3"	"100.000"	"72.6126"	"24507"	"24507"	"24481"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.2"	""	"12.5"	""	"13.1"	""	"16.2"	""	"19.5"	"17.8"	""	"668"	"37"	"35.000"	"28.000"	"0.00604987590934948"	"15"	"0"	"5.571E-05"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSTVAGESGSADTVRDPR"	"[R].fSTVAGESGSADTVRDPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"1"	"3"	"3"	"0.9032"	"0.0000"	"1"	"1"	"1"	"694.35278"	"2081.04380"	"2081.04608"	"-1.10"	"-0.00076"	"11/170"	"11"	"170"	"1138452.92730713"	"HCD"	"MS2"	"12.182"	"35.6"	"100.000"	"49.7724"	"15245"	"15245"	"15222"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.2"	""	"53.3"	""	"48.4"	""	"55.4"	"0.9"	"47.0"	"51.6"	""	"1130"	"31"	"37.000"	"30.000"	"0.0421743548501688"	"17"	"0"	"0.0001514"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSTVAGESGSADTVRDPR"	"[R].fSTVAGESGSADTVRDPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"1"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"694.35394"	"2081.04728"	"2081.04608"	"0.58"	"0.00040"	"8/170"	"8"	"170"	"927100.936889648"	"HCD"	"MS2"	"8.016011"	"31.4"	"100.000"	"50.1785"	"15399"	"15399"	"15374"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"66.6"	""	"48.5"	""	"44.2"	""	"49.1"	"0.9"	"43.7"	"42.9"	""	"1150"	"28"	"37.000"	"30.000"	"0.101781265103252"	"20"	"0"	"0.0003417"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSPVLVDSFEDSEPYR"	"[K].dSPVLVDSFEDSEPYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1042.50403"	"2084.00078"	"2084.00215"	"-0.66"	"-0.00068"	"5/144"	"5"	"144"	"74688.5897216797"	"HCD"	"MS2"	"0"	"2.4"	"100.000"	"96.4136"	"33825"	"33825"	"33810"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"2.8"	""	"4.7"	""	"2.9"	""	"2.4"	""	"5.8"	"4.3"	""	"803"	"7"	"36.000"	"29.000"	"8.14114611887795"	"13"	"0.001374"	"0.01712"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSPVLVDSFEDSEPYR"	"[K].dSPVLVDSFEDSEPYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"695.33850"	"2084.00095"	"2084.00215"	"-0.57"	"-0.00040"	"13/144"	"13"	"144"	"281548.218688965"	"HCD"	"MS2"	"21.39559"	"4.4"	"100.000"	"96.4299"	"33831"	"33831"	"33819"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.5"	""	"9.2"	""	"7.9"	""	"5.4"	""	"5.2"	"6.5"	""	"803"	"34"	"36.000"	"29.000"	"0.0160947987127362"	"15"	"0"	"0.0002466"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSPVLVDSFEDSEPYR"	"[K].dSPVLVDSFEDSEPYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"1042.50452"	"2084.00176"	"2084.00215"	"-0.19"	"-0.00019"	"7/144"	"7"	"144"	"110596.109375"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"96.4840"	"33830"	"33830"	"33817"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.8"	""	"5.2"	""	"6.2"	""	"4.3"	""	"6.7"	"4.8"	""	"797"	"9"	"36.000"	"29.000"	"4.8576735517156"	"15"	"0.001374"	"0.01597"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSPVLVDSFEDSEPYR"	"[K].dSPVLVDSFEDSEPYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"695.33911"	"2084.00278"	"2084.00215"	"0.30"	"0.00021"	"14/144"	"14"	"144"	"302091.488525391"	"HCD"	"MS2"	"15.40516"	"4.8"	"100.000"	"96.4773"	"33827"	"33827"	"33817"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"10.1"	""	"7.6"	""	"8.2"	""	"6.3"	""	"6.6"	"7.0"	""	"804"	"43"	"36.000"	"29.000"	"0.00189332885211575"	"15"	"0"	"1.894E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASSEGGAATGAGLDSLHK"	"[K].aSSEGGAATGAGLDSLHk.[N]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"0.9846"	"0.0000"	"1"	"1"	"1"	"696.37592"	"2087.11319"	"2087.11332"	"-0.06"	"-0.00004"	"20/162"	"20"	"162"	"474832.594421387"	"HCD"	"MS2"	"63.10727"	"21.9"	"100.000"	"53.6458"	"16825"	"16825"	"16796"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"35.2"	""	"21.8"	""	"21.0"	""	"31.1"	""	"36.4"	"65.2"	""	"1279"	"65"	"38.000"	"31.000"	"1.86999544563081E-05"	"18"	"0"	"3.424E-10"	"1.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASSEGGAATGAGLDSLHK"	"[K].aSSEGGAATGAGLDSLHk.[N]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.37610"	"2087.11374"	"2087.11332"	"0.20"	"0.00014"	"16/162"	"16"	"162"	"483948.353759766"	"HCD"	"MS2"	"57.98558"	"23.3"	"100.000"	"53.9108"	"16922"	"16922"	"16896"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.6"	""	"24.8"	""	"23.8"	""	"30.7"	""	"33.8"	"76.8"	""	"1272"	"52"	"38.000"	"31.000"	"0.000366823470717472"	"16"	"0"	"4.049E-06"	"0.988"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVSPAGAAVGVPLSEDEAR"	"[K].hVSPAGAAVGVPLSEDEAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"697.70538"	"2091.10160"	"2091.10320"	"-0.77"	"-0.00053"	"14/172"	"14"	"172"	"2650505.20178223"	"HCD"	"MS2"	"39.7949"	"32.4"	"100.000"	"56.8310"	"18121"	"18121"	"18099"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"49.5"	""	"36.1"	""	"35.6"	""	"66.9"	""	"61.8"	"59.2"	""	"1344"	"62"	"38.000"	"31.000"	"4.00284960451495E-05"	"21"	"0"	"4.198E-08"	"1.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVSPAGAAVGVPLSEDEAR"	"[K].hVSPAGAAVGVPLSEDEAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"0.9423"	"0.0000"	"1"	"1"	"1"	"697.70575"	"2091.10270"	"2091.10320"	"-0.24"	"-0.00017"	"20/172"	"20"	"172"	"2547253.92480469"	"HCD"	"MS2"	"10.24317"	"29.7"	"100.000"	"57.0840"	"18210"	"18210"	"18192"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"44.9"	""	"35.3"	""	"36.0"	""	"56.1"	""	"50.6"	"60.1"	""	"1355"	"52"	"38.000"	"31.000"	"0.000456992738765342"	"18"	"0"	"1.247E-07"	"1.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDQYQGADAVGLEEK"	"[R].iDQYQGADAVGLEEk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"698.70795"	"2094.10929"	"2094.11192"	"-1.26"	"-0.00088"	"14/160"	"14"	"160"	"287442.498657227"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"83.7024"	"28957"	"28957"	"28935"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.9"	""	"12.8"	""	"11.4"	""	"11.2"	""	"17.3"	"17.3"	""	"1260"	"27"	"37.000"	"31.000"	"0.123976836251531"	"16"	"0"	"0.0001239"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDQYQGADAVGLEEK"	"[R].iDQYQGADAVGLEEk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"698.70813"	"2094.10984"	"2094.11192"	"-1.00"	"-0.00069"	"11/160"	"11"	"160"	"344769.748718262"	"HCD"	"MS2"	"12.87311"	"11.0"	"100.000"	"83.6937"	"28956"	"28956"	"28933"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.6"	""	"18.1"	""	"12.3"	""	"16.0"	""	"22.9"	"18.0"	""	"1268"	"36"	"38.000"	"31.000"	"0.017261926293214"	"20"	"0"	"0.0003411"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDQYQGADAVGLEEK"	"[R].iDQYQGADAVGLEEk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"698.70831"	"2094.11039"	"2094.11192"	"-0.73"	"-0.00051"	"13/160"	"13"	"160"	"306740.382629395"	"HCD"	"MS2"	"5.669657"	"11.1"	"100.000"	"84.0080"	"29078"	"29078"	"29063"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.7"	""	"13.3"	""	"15.0"	""	"17.4"	""	"18.4"	"22.5"	""	"1268"	"68"	"38.000"	"31.000"	"1.07668647566074E-05"	"30"	"0"	"1.634E-06"	"1.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDQYQGADAVGLEEK"	"[R].iDQYQGADAVGLEEk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"0"	"3"	"3"	"0.7879"	"0.0000"	"1"	"1"	"1"	"698.70874"	"2094.11167"	"2094.11192"	"-0.12"	"-0.00008"	"13/160"	"13"	"160"	"286326.086364746"	"HCD"	"MS2"	"2.116132"	"10.4"	"100.000"	"83.9829"	"29070"	"29070"	"29055"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.4"	""	"14.8"	""	"15.1"	""	"15.0"	""	"18.3"	"20.7"	""	"1268"	"33"	"38.000"	"31.000"	"0.0341263042115327"	"21"	"0"	"0.0001738"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"699.02972"	"2095.07462"	"2095.07818"	"-1.70"	"-0.00119"	"11/152"	"11"	"152"	"219839.00604248"	"HCD"	"MS2"	"15.80915"	"7.0"	"100.000"	"82.7594"	"28592"	"28592"	"28581"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.3"	""	"10.1"	""	"12.2"	""	"6.4"	""	"11.2"	"14.2"	""	"1168"	"39"	"37.000"	"30.000"	"0.00761049398616143"	"17"	"0"	"0.0003494"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"699.02991"	"2095.07517"	"2095.07818"	"-1.44"	"-0.00100"	"13/152"	"13"	"152"	"182982.133911133"	"HCD"	"MS2"	"15.02135"	"8.0"	"100.000"	"83.0509"	"28705"	"28705"	"28694"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.9"	""	"10.3"	""	"14.5"	""	"9.5"	""	"11.6"	"15.8"	""	"1188"	"36"	"37.000"	"30.000"	"0.0162474962342619"	"15"	"0"	"0.0001701"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"699.03064"	"2095.07737"	"2095.07818"	"-0.39"	"-0.00027"	"12/152"	"12"	"152"	"150617.46862793"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"83.0684"	"28711"	"28711"	"28695"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.3"	""	"8.9"	""	"9.7"	""	"8.6"	""	"10.6"	"11.2"	""	"1201"	"26"	"37.000"	"30.000"	"0.146053850744882"	"15"	"0"	"0.0008745"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"699.03119"	"2095.07901"	"2095.07818"	"0.40"	"0.00028"	"11/152"	"11"	"152"	"268906.900756836"	"HCD"	"MS2"	"21.87599"	"8.0"	"100.000"	"82.7771"	"28597"	"28597"	"28581"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"16.6"	""	"9.2"	""	"14.1"	""	"7.5"	""	"14.3"	"14.6"	""	"1202"	"39"	"37.000"	"30.000"	"0.00799603105204833"	"15"	"0"	"4.107E-05"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVYGHLDDPANQEIER"	"[K].iVYGHLDDPANQEIER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"700.03040"	"2098.07663"	"2098.07665"	"-0.01"	"0.00000"	"17/146"	"17"	"146"	"1248907.13684082"	"HCD"	"MS2"	"23.90854"	"17.0"	"100.000"	"68.5461"	"22836"	"22836"	"22805"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"37.8"	""	"24.6"	""	"18.1"	""	"29.5"	""	"24.6"	"26.4"	""	"1264"	"70"	"38.000"	"31.000"	"6.70991592149595E-06"	"21"	"0"	"5.232E-08"	"1.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANGAPISQGVDTANPTK"	"[K].anGAPISQGVDTANPTk.[Q]"	"N-Term(TMT6plex); N2(Deamidated); K17(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"3"	"3"	"0.5867"	"0.0000"	"1"	"1"	"1"	"700.71320"	"2100.12503"	"2100.13372"	"-4.14"	"-0.00289"	"18/176"	"18"	"176"	"2569174.58062744"	"HCD"	"MS2"	"42.99286"	"53.7"	"100.000"	"59.8387"	"19330"	"19330"	"19319"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"96.4"	""	"93.2"	""	"78.9"	""	"60.0"	"0.8"	"90.2"	"88.2"	""	"1284"	"75"	"38.000"	"31.000"	"1.85154822500728E-06"	"17"	"0"	"8.014E-09"	"1.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANGAPISQGVDTANPTK"	"[K].anGAPISQGVDTANPTk.[Q]"	"N-Term(TMT6plex); N2(Deamidated); K17(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"3"	"3"	"0.6914"	"0.0000"	"1"	"1"	"1"	"700.71344"	"2100.12577"	"2100.13372"	"-3.79"	"-0.00265"	"17/176"	"17"	"176"	"1034058.89581299"	"HCD"	"MS2"	"41.59566"	"29.4"	"100.000"	"60.1127"	"19430"	"19430"	"19421"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"43.8"	""	"54.2"	""	"38.6"	""	"39.1"	"2.6"	"47.9"	"52.1"	""	"1276"	"81"	"38.000"	"31.000"	"5.27012211830241E-07"	"18"	"0"	"3.439E-08"	"1.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANGAPISQGVDTANPTK"	"[K].anGAPISQGVDTANPTk.[Q]"	"N-Term(TMT6plex); N2(Deamidated); K17(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"3"	"3"	"0.6901"	"0.0000"	"1"	"1"	"1"	"700.71478"	"2100.12979"	"2100.13372"	"-1.87"	"-0.00131"	"18/176"	"18"	"176"	"1620284.94940186"	"HCD"	"MS2"	"58.74834"	"40.0"	"100.000"	"60.0373"	"19398"	"19398"	"19393"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"76.3"	""	"70.6"	""	"63.0"	""	"51.6"	""	"58.6"	"57.7"	""	"1250"	"71"	"37.000"	"30.000"	"5.29517133837874E-06"	"20"	"0"	"1.023E-07"	"1.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANGAPISQGVDTANPTK"	"[K].anGAPISQGVDTANPTk.[Q]"	"N-Term(TMT6plex); N2(Deamidated); K17(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"700.71478"	"2100.12979"	"2100.13372"	"-1.87"	"-0.00131"	"18/176"	"18"	"176"	"1882624.60986328"	"HCD"	"MS2"	"10.49401"	"51.4"	"100.000"	"60.3057"	"19496"	"19496"	"19491"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"77.1"	""	"76.1"	""	"50.8"	""	"81.5"	"0.2"	"99.0"	"103.1"	""	"1250"	"51"	"37.000"	"30.000"	"0.000557031836333592"	"17"	"0"	"5.247E-07"	"1.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANGAPISQGVDTANPTK"	"[K].anGAPISQGVDTANPTk.[Q]"	"N-Term(TMT6plex); N2(Deamidated); K17(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"700.71613"	"2100.13382"	"2100.13372"	"0.05"	"0.00003"	"14/176"	"14"	"176"	"1200341.31872559"	"HCD"	"MS2"	"5.885048"	"35.7"	"100.000"	"59.1290"	"19044"	"19044"	"19016"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"57.5"	""	"60.2"	""	"43.7"	""	"46.8"	"2.0"	"73.4"	"54.5"	""	"1242"	"52"	"37.000"	"30.000"	"0.000433602322931923"	"18"	"0"	"3.457E-07"	"1.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANGAPISQGVDTANPTK"	"[K].anGAPISQGVDTANPTk.[Q]"	"N-Term(TMT6plex); N2(Deamidated); K17(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"700.71655"	"2100.13510"	"2100.13372"	"0.66"	"0.00046"	"18/176"	"18"	"176"	"1270218.24346924"	"HCD"	"MS2"	"2.623375"	"33.0"	"100.000"	"58.9730"	"18995"	"18995"	"18975"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"51.4"	""	"56.3"	""	"41.7"	""	"38.5"	""	"65.7"	"61.0"	""	"1237"	"78"	"37.000"	"30.000"	"9.02276619980302E-07"	"17"	"0"	"7.068E-09"	"1.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANGAPISQGVDTANPTK"	"[K].anGAPISqGVDTANPTk.[Q]"	"N-Term(TMT6plex); N2(Deamidated); Q8(Deamidated); K17(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"3"	"3"	"0.1765"	"0.0000"	"1"	"1"	"1"	"701.04974"	"2101.13468"	"2101.11773"	"8.06"	"0.00565"	"19/176"	"19"	"176"	"2430157.69256592"	"HCD"	"MS2"	"35.29505"	"56.4"	"100.000"	"60.0958"	"19418"	"19418"	"19406"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"112.1"	""	"95.1"	""	"74.8"	""	"69.6"	"0.5"	"92.2"	"88.9"	""	"1235"	"68"	"37.000"	"30.000"	"1.02479491534269E-05"	"19"	"0"	"1.012E-06"	"1.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANGAPISQGVDTANPTK"	"[K].anGAPISqGVDTANPTk.[Q]"	"N-Term(TMT6plex); N2(Deamidated); Q8(Deamidated); K17(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"3"	"3"	"0.0169"	"0.0000"	"1"	"1"	"1"	"701.04980"	"2101.13486"	"2101.11773"	"8.15"	"0.00571"	"19/176"	"19"	"176"	"1717018.26757813"	"HCD"	"MS2"	"30.20364"	"42.3"	"100.000"	"59.7791"	"19308"	"19308"	"19301"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.9"	""	"75.5"	""	"54.9"	""	"58.1"	""	"73.7"	"65.5"	""	"1239"	"59"	"37.000"	"30.000"	"7.56904889472137E-05"	"18"	"0"	"6.463E-07"	"1.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANGAPISQGVDTANPTK"	"[K].anGAPISQGVDTAnPTk.[Q]"	"N-Term(TMT6plex); N2(Deamidated); N14(Deamidated); K17(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"3"	"3"	""	"0.0169"	"2"	"2"	"2"	"701.04980"	"2101.13486"	"2101.11773"	"8.15"	"0.00571"	"17/176"	"17"	"176"	"1717018.26757813"	"HCD"	"MS2"	"30.20364"	"42.3"	"100.000"	"59.7791"	"19308"	"19308"	"19301"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"74.9"	""	"75.5"	""	"54.9"	""	"58.1"	""	"73.7"	"65.5"	""	"1239"	"58"	"37.000"	"30.000"	"0.000107409157660869"	"18"	"0"	"9.33E-07"	"1.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AKDAPEEEAMESSVR"	"[R].akDAPEEEAMESSVR.[E]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"703.02924"	"2107.07315"	"2107.07415"	"-0.47"	"-0.00033"	"6/158"	"6"	"158"	"725628.862854004"	"HCD"	"MS2"	"23.57211"	"46.4"	"100.000"	"48.5932"	"14765"	"14765"	"14735"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"69.0"	""	"57.1"	""	"50.1"	""	"68.9"	""	"103.3"	"95.8"	""	"1216"	"11"	"37.000"	"30.000"	"4.91930306700457"	"13"	"0.003922"	"0.04001"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); M1(Oxidation); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1056.03821"	"2111.06914"	"2111.07309"	"-1.87"	"-0.00198"	"9/152"	"9"	"152"	"115157.174255371"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"70.4327"	"23619"	"23619"	"23592"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.7"	""	"6.7"	""	"9.8"	""	"14.8"	""	"8.9"	"9.4"	""	"1179"	"17"	"37.000"	"30.000"	"1.30461933131252"	"14"	"0.006189"	"0.07062"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); M1(Oxidation); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"704.36194"	"2111.07126"	"2111.07309"	"-0.87"	"-0.00061"	"15/152"	"15"	"152"	"633898.075622559"	"HCD"	"MS2"	"9.67897"	"19.1"	"100.000"	"70.7988"	"23754"	"23754"	"23733"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.4"	""	"29.9"	""	"32.0"	""	"31.7"	""	"34.8"	"30.2"	""	"1200"	"44"	"37.000"	"30.000"	"0.0023504512626467"	"17"	"0"	"5.075E-05"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); M1(Oxidation); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"704.36206"	"2111.07163"	"2111.07309"	"-0.69"	"-0.00049"	"15/152"	"15"	"152"	"1360133.21972656"	"HCD"	"MS2"	"10.60938"	"29.7"	"100.000"	"70.6035"	"23688"	"23688"	"23672"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"37.5"	""	"46.0"	""	"46.6"	""	"54.6"	""	"50.6"	"47.7"	""	"1201"	"40"	"37.000"	"30.000"	"0.00593626133341492"	"20"	"0"	"2.429E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); M1(Oxidation); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"704.36230"	"2111.07236"	"2111.07309"	"-0.35"	"-0.00024"	"13/152"	"13"	"152"	"2258882.63995361"	"HCD"	"MS2"	"11.32234"	"51.5"	"100.000"	"70.2992"	"23564"	"23564"	"23544"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"65.3"	""	"78.8"	""	"88.6"	""	"105.3"	""	"76.1"	"74.8"	""	"1200"	"39"	"37.000"	"30.000"	"0.00698475617646293"	"20"	"0"	"5.102E-05"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); M1(Oxidation); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"704.36304"	"2111.07456"	"2111.07309"	"0.69"	"0.00049"	"14/152"	"14"	"152"	"2051929.81109619"	"HCD"	"MS2"	"5.881692"	"47.4"	"100.000"	"70.4738"	"23622"	"23622"	"23605"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"64.2"	""	"67.8"	""	"80.5"	""	"89.8"	""	"79.0"	"68.8"	""	"1203"	"46"	"37.000"	"30.000"	"0.00156760136032433"	"20"	"0"	"4.282E-05"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEDQESALPAAMVQPR"	"[R].iLEDQESALPAAmVQPR.[T]"	"N-Term(TMT6plex); M13(Oxidation)"	"1"	"1"	"P85971"	"6-phosphogluconolactonase OS=Rattus norvegicus OX=10116 GN=Pgls PE=1 SV=1"	"P85971"	"6-phosphogluconolactonase OS=Rattus norvegicus OX=10116 GN=Pgls PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"705.04401"	"2113.11747"	"2113.11607"	"0.66"	"0.00047"	"3/160"	"3"	"160"	"84816.5916137695"	"HCD"	"MS2"	"26.17343"	"4.6"	"100.000"	"85.4365"	"29642"	"29642"	"29617"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.8"	""	"6.4"	""	"5.5"	""	"8.8"	""	"8.7"	"6.7"	""	"1223"	"4"	"37.000"	"30.000"	"26.877969784023"	"14"	"0.0008629"	"0.01045"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSYESDDLEQDLEK"	"[R].sSYESDDLEQDLEk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.8649"	"0.0000"	"1"	"1"	"1"	"706.01648"	"2116.03489"	"2116.03339"	"0.70"	"0.00050"	"10/136"	"10"	"136"	"180697.510681152"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"81.7794"	"28198"	"28198"	"28178"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.4"	""	"3.8"	""	"8.0"	""	"9.0"	""	"15.5"	"18.2"	""	"970"	"37"	"36.000"	"29.000"	"0.0105862400724385"	"19"	"0"	"0.000622"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEWETATPAVAETPDIK"	"[M].tEWETATPAVAETPDIk.[L]"	"N-Term(Prot)(Acetyl); K17(TMT6plex)"	"1"	"1"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"710.69727"	"2130.07724"	"2130.08040"	"-1.48"	"-0.00105"	"6/156"	"6"	"156"	"297454.145202637"	"HCD"	"MS2"	"4.729986"	"7.6"	"100.000"	"107.3364"	"37406"	"37406"	"37396"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.0"	""	"7.5"	""	"10.0"	""	"14.8"	""	"13.6"	"16.1"	""	"1168"	"24"	"37.000"	"30.000"	"0.238458521618292"	"14"	"0"	"0.002872"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEWETATPAVAETPDIK"	"[M].tEWETATPAVAETPDIk.[L]"	"N-Term(Prot)(Acetyl); K17(TMT6plex)"	"1"	"1"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"710.69757"	"2130.07816"	"2130.08040"	"-1.05"	"-0.00075"	"6/156"	"6"	"156"	"205637.214050293"	"HCD"	"MS2"	"2.592063"	"5.3"	"100.000"	"107.3672"	"37343"	"37343"	"37338"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.5"	""	"4.5"	""	"8.3"	""	"9.3"	""	"10.7"	"10.5"	""	"1167"	"31"	"37.000"	"30.000"	"0.0490954065149972"	"16"	"0.0008629"	"0.01031"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEWETATPAVAETPDIK"	"[M].tEWETATPAVAETPDIk.[L]"	"N-Term(Prot)(Acetyl); K17(TMT6plex)"	"1"	"1"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"1065.54407"	"2130.08086"	"2130.08040"	"0.22"	"0.00023"	"6/156"	"6"	"156"	"131884.055480957"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"107.3786"	"37347"	"37347"	"37338"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.7"	""	"3.1"	""	"4.5"	""	"7.6"	""	"6.9"	"4.7"	""	"1179"	"30"	"37.000"	"30.000"	"0.0584095431514286"	"17"	"0"	"0.003225"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEWETATPAVAETPDIK"	"[M].tEWETATPAVAETPDIk.[L]"	"N-Term(Prot)(Acetyl); K17(TMT6plex)"	"1"	"1"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"1065.54492"	"2130.08257"	"2130.08040"	"1.02"	"0.00109"	"6/156"	"6"	"156"	"128106.144226074"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"107.3245"	"37401"	"37401"	"37385"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.8"	""	"3.4"	""	"7.2"	""	"5.3"	""	"10.5"	"3.7"	""	"1200"	"42"	"37.000"	"30.000"	"0.00402857311755571"	"18"	"0"	"0.00143"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVTNEDVTQEQLGGAK"	"[K].sVTNEDVTQEQLGGAk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"712.05109"	"2134.13871"	"2134.13920"	"-0.23"	"-0.00016"	"11/162"	"11"	"162"	"214783.801269531"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"61.1621"	"19838"	"19838"	"19814"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.5"	""	"16.4"	""	"19.2"	""	"22.6"	""	"27.9"	"23.7"	""	"1346"	"20"	"38.000"	"31.000"	"0.712877757044316"	"14"	"0.0001301"	"0.003879"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVTNEDVTQEQLGGAK"	"[K].sVTNEDVTQEQLGGAk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"712.05109"	"2134.13871"	"2134.13920"	"-0.23"	"-0.00016"	"9/162"	"9"	"162"	"209984.196960449"	"HCD"	"MS2"	"13.40586"	"12.5"	"100.000"	"60.9509"	"19768"	"19768"	"19737"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.7"	""	"20.7"	""	"14.1"	""	"21.5"	""	"28.1"	"24.1"	""	"1346"	"14"	"38.000"	"31.000"	"2.65469764296662"	"14"	"0.00447"	"0.04791"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDGSVIDYELIDQDAR"	"[R].aEDGSVIDYELIDQDAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.8136"	"0.0000"	"1"	"1"	"1"	"713.35309"	"2138.04471"	"2138.04507"	"-0.17"	"-0.00012"	"14/160"	"14"	"160"	"115475.03125"	"HCD"	"MS2"	"0"	"1.8"	"100.000"	"96.8452"	"33981"	"33981"	"33972"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.1"	""	"3.2"	""	""	""	"2.7"	""	"4.0"	"5.1"	""	"932"	"59"	"36.000"	"29.000"	"6.04485540278523E-05"	"27"	"0"	"2.511E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDGSVIDYELIDQDAR"	"[R].aEDGSVIDYELIDQDAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"713.35358"	"2138.04618"	"2138.04507"	"0.52"	"0.00037"	"10/160"	"10"	"160"	"97445.0037231445"	"HCD"	"MS2"	"0"	"1.9"	"100.000"	"96.8850"	"33974"	"33974"	"33966"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	"4.6"	""	"2.2"	""	"4.9"	""	"2.5"	"4.0"	""	"939"	"39"	"36.000"	"29.000"	"0.00649584414927251"	"17"	"0"	"0.0004306"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPGFPQPSPSDDPSLSPR"	"[K].qPGFPQPSPSDDPSLSPR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MC0"	"Protein phosphatase 1 regulatory subunit 14A OS=Rattus norvegicus OX=10116 GN=Ppp1r14a PE=1 SV=1"	"Q99MC0"	"Protein phosphatase 1 regulatory subunit 14A OS=Rattus norvegicus OX=10116 GN=Ppp1r14a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.36096"	"2138.06833"	"2138.07156"	"-1.51"	"-0.00108"	"11/186"	"11"	"186"	"329096.094543457"	"HCD"	"MS2"	"13.91338"	"5.6"	"100.000"	"73.3252"	"24796"	"24796"	"24775"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.4"	""	"8.5"	""	"5.1"	""	"9.5"	""	"12.0"	"10.1"	""	"1083"	"22"	"37.000"	"30.000"	"0.31448393208779"	"14"	"0.0001301"	"0.003837"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPGFPQPSPSDDPSLSPR"	"[K].qPGFPQPSPSDDPSLSPR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MC0"	"Protein phosphatase 1 regulatory subunit 14A OS=Rattus norvegicus OX=10116 GN=Ppp1r14a PE=1 SV=1"	"Q99MC0"	"Protein phosphatase 1 regulatory subunit 14A OS=Rattus norvegicus OX=10116 GN=Ppp1r14a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.36163"	"2138.07035"	"2138.07156"	"-0.57"	"-0.00041"	"12/186"	"12"	"186"	"346329.850646973"	"HCD"	"MS2"	"17.62892"	"5.4"	"100.000"	"73.5087"	"24858"	"24858"	"24827"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"9.1"	""	"7.5"	""	"7.8"	""	"10.4"	""	"7.6"	"9.2"	""	"1091"	"28"	"37.000"	"30.000"	"0.0947970352082783"	"14"	"0"	"0.001687"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPGFPQPSPSDDPSLSPR"	"[K].qPGFPQPSPSDDPSLSPR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MC0"	"Protein phosphatase 1 regulatory subunit 14A OS=Rattus norvegicus OX=10116 GN=Ppp1r14a PE=1 SV=1"	"Q99MC0"	"Protein phosphatase 1 regulatory subunit 14A OS=Rattus norvegicus OX=10116 GN=Ppp1r14a PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"713.36224"	"2138.07218"	"2138.07156"	"0.29"	"0.00020"	"13/186"	"13"	"186"	"365696.019226074"	"HCD"	"MS2"	"3.033972"	"6.9"	"100.000"	"73.8293"	"24988"	"24988"	"24967"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.3"	""	"7.2"	""	"7.6"	"1.8"	"15.4"	""	"14.3"	"11.1"	""	"1109"	"30"	"37.000"	"30.000"	"0.0599655125994707"	"17"	"0"	"0.001092"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPGFPQPSPSDDPSLSPR"	"[K].qPGFPQPSPSDDPSLSPR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MC0"	"Protein phosphatase 1 regulatory subunit 14A OS=Rattus norvegicus OX=10116 GN=Ppp1r14a PE=1 SV=1"	"Q99MC0"	"Protein phosphatase 1 regulatory subunit 14A OS=Rattus norvegicus OX=10116 GN=Ppp1r14a PE=1 SV=1"	"0"	"3"	"3"	"0.8810"	"0.0000"	"1"	"1"	"1"	"713.36249"	"2138.07291"	"2138.07156"	"0.63"	"0.00045"	"14/186"	"14"	"186"	"444207.438781738"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"73.6527"	"24929"	"24929"	"24909"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.3"	""	"11.3"	""	"10.7"	""	"16.2"	""	"22.5"	"16.8"	""	"1110"	"42"	"37.000"	"30.000"	"0.00319369165222122"	"20"	"0"	"6.892E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHNGQVTGIDWAPESNR"	"[K].eHNGQVTGIDWAPESNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.68451"	"2139.03897"	"2139.04166"	"-1.26"	"-0.00090"	"7/184"	"7"	"184"	"699814.75390625"	"HCD"	"MS2"	"48.77501"	"10.7"	"100.000"	"55.0966"	"17414"	"17414"	"17384"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.2"	""	"11.0"	""	"10.2"	""	"18.7"	""	"22.2"	"18.9"	""	"926"	"44"	"36.000"	"29.000"	"0.00183476729860268"	"15"	"0"	"1.824E-07"	"1.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHNGQVTGIDWAPESNR"	"[K].eHNGQVTGIDWAPESNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.68451"	"2139.03897"	"2139.04166"	"-1.26"	"-0.00090"	"9/184"	"9"	"184"	"1091349.16430664"	"HCD"	"MS2"	"12.60403"	"12.0"	"100.000"	"55.3611"	"17508"	"17508"	"17479"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.5"	""	"15.4"	""	"17.7"	""	"20.8"	""	"18.9"	"21.2"	""	"926"	"55"	"36.000"	"29.000"	"0.000140469161828195"	"16"	"0"	"7.059E-08"	"1.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHNGQVTGIDWAPESNR"	"[K].eHNGQVTGIDWAPESNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.68518"	"2139.04099"	"2139.04166"	"-0.31"	"-0.00022"	"16/184"	"16"	"184"	"661866.304931641"	"HCD"	"MS2"	"8.756549"	"9.5"	"100.000"	"55.4191"	"17545"	"17545"	"17527"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.0"	""	"9.4"	""	"12.5"	""	"16.9"	""	"19.6"	"17.8"	""	"934"	"39"	"36.000"	"29.000"	"0.00564049060994867"	"15"	"0"	"1.277E-06"	"1.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHNGQVTGIDWAPESNR"	"[K].eHNGQVTGIDWAPESNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.68524"	"2139.04117"	"2139.04166"	"-0.23"	"-0.00016"	"13/184"	"13"	"184"	"351570.350830078"	"HCD"	"MS2"	"9.908708"	"9.5"	"100.000"	"55.6905"	"17642"	"17642"	"17618"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.2"	""	"15.3"	""	"9.3"	""	"14.0"	"1.2"	"17.1"	"19.4"	""	"929"	"26"	"36.000"	"29.000"	"0.121334894911843"	"14"	"0"	"5.311E-05"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSPYGGGYGSGGGSGGYGSR"	"[R].sSGSPYGGGYGSGGGSGGYGSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.98834"	"2139.95047"	"2139.95290"	"-1.14"	"-0.00081"	"19/208"	"19"	"208"	"628245.010559082"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"40.4623"	"11450"	"11450"	"11426"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"23.2"	""	"11.9"	""	"19.5"	""	"22.1"	""	"21.3"	"20.9"	""	"327"	"68"	"32.000"	"25.000"	"2.77662837177495E-06"	"17"	"0"	"4.352E-08"	"1.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSPYGGGYGSGGGSGGYGSR"	"[R].sSGSPYGGGYGSGGGSGGYGSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.98926"	"2139.95322"	"2139.95290"	"0.15"	"0.00011"	"22/208"	"22"	"208"	"629826.841003418"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"40.2662"	"11379"	"11379"	"11352"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"21.0"	""	"12.4"	""	"17.8"	""	"21.5"	""	"21.7"	"19.5"	""	"328"	"99"	"32.000"	"25.000"	"2.1520078343915E-09"	"19"	"0"	"4.062E-11"	"2.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHNGQVTGIDWAPESNR"	"[K].eHnGQVTGIDWAPESNR.[I]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"0.2955"	"0.0000"	"1"	"1"	"1"	"714.01300"	"2140.02445"	"2140.02568"	"-0.57"	"-0.00041"	"17/184"	"17"	"184"	"845302.715637207"	"HCD"	"MS2"	"5.434494"	"11.7"	"100.000"	"64.2084"	"21088"	"21088"	"21065"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"17.3"	""	"15.6"	""	"18.9"	""	"14.7"	""	"18.3"	"26.7"	""	"787"	"44"	"35.000"	"28.000"	"0.00172164948379772"	"15"	"0"	"1.152E-06"	"1.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHNGQVTGIDWAPESNR"	"[K].eHNGqVTGIDWAPESNR.[I]"	"N-Term(TMT6plex); Q5(Deamidated)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"0.8406"	"0.0000"	"1"	"1"	"1"	"714.01337"	"2140.02555"	"2140.02568"	"-0.06"	"-0.00004"	"8/184"	"8"	"184"	"787099.873657227"	"HCD"	"MS2"	"17.15089"	"10.3"	"100.000"	"64.3181"	"21118"	"21118"	"21099"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.3"	""	"13.7"	""	"13.4"	""	"18.7"	""	"16.8"	"17.2"	""	"795"	"69"	"35.000"	"29.000"	"5.05053206820396E-06"	"26"	"0"	"3.585E-07"	"1.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHNGQVTGIDWAPESNR"	"[K].eHnGQVTGIDWAPESNR.[I]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"0.8406"	"0.0000"	"1"	"2"	"2"	"714.01337"	"2140.02555"	"2140.02568"	"-0.06"	"-0.00004"	"8/184"	"8"	"184"	"787099.873657227"	"HCD"	"MS2"	"17.15089"	"10.3"	"100.000"	"64.3181"	"21118"	"21118"	"21099"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.3"	""	"13.7"	""	"13.4"	""	"18.7"	""	"16.8"	"17.2"	""	"795"	"69"	"35.000"	"29.000"	"5.05053206820396E-06"	"26"	"0"	"4.283E-08"	"1.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPNPPIDEVINTPGVVAR"	"[K].ePNPPIDEVINTPGVVAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P83953"	"Importin subunit alpha-5 OS=Rattus norvegicus OX=10116 GN=Kpna1 PE=1 SV=1"	"P83953"	"Importin subunit alpha-5 OS=Rattus norvegicus OX=10116 GN=Kpna1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"716.06183"	"2146.17093"	"2146.17055"	"0.18"	"0.00013"	"8/188"	"8"	"188"	"205317.269958496"	"HCD"	"MS2"	"25.40765"	"4.0"	"100.000"	"95.1892"	"33367"	"33367"	"33351"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.5"	""	"4.9"	""	"14.5"	""	"4.1"	""	"4.3"	"5.3"	""	"1303"	"9"	"38.000"	"31.000"	"8.45112295046048"	"13"	"0.0003538"	"0.006487"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPNPPIDEVINTPGVVAR"	"[K].ePNPPIDEVINTPGVVAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P83953"	"Importin subunit alpha-5 OS=Rattus norvegicus OX=10116 GN=Kpna1 PE=1 SV=1"	"P83953"	"Importin subunit alpha-5 OS=Rattus norvegicus OX=10116 GN=Kpna1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"716.06219"	"2146.17203"	"2146.17055"	"0.69"	"0.00049"	"8/188"	"8"	"188"	"144316.635009766"	"HCD"	"MS2"	"27.13748"	"3.8"	"100.000"	"95.2464"	"33406"	"33406"	"33399"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.4"	""	"4.2"	""	"9.2"	""	"7.3"	""	"5.0"	"6.4"	""	"1302"	"12"	"38.000"	"31.000"	"4.42161564833788"	"13"	"0.0001301"	"0.00444"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPNPPIDEVINTPGVVAR"	"[K].ePNPPIDEVINTPGVVAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P83953"	"Importin subunit alpha-5 OS=Rattus norvegicus OX=10116 GN=Kpna1 PE=1 SV=1"	"P83953"	"Importin subunit alpha-5 OS=Rattus norvegicus OX=10116 GN=Kpna1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"716.06256"	"2146.17313"	"2146.17055"	"1.20"	"0.00086"	"10/188"	"10"	"188"	"263632.216003418"	"HCD"	"MS2"	"46.73818"	"4.8"	"100.000"	"94.9838"	"33313"	"33313"	"33300"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.4"	""	"3.2"	""	"14.8"	""	"8.6"	""	"3.8"	"6.8"	""	"1297"	"16"	"38.000"	"31.000"	"1.45515742757312"	"14"	"0"	"0.001282"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQGQPIDDLMPAQK"	"[R].lEQGQPIDDLmPAQk.[-]"	"N-Term(TMT6plex); M11(Oxidation); K15(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"719.72498"	"2157.16037"	"2157.16258"	"-1.02"	"-0.00073"	"10/150"	"10"	"150"	"191885.386535645"	"HCD"	"MS2"	"8.595625"	"6.6"	"100.000"	"80.5062"	"27687"	"27687"	"27672"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.5"	""	"8.1"	""	"8.2"	""	"16.9"	""	"13.5"	"8.3"	""	"1252"	"29"	"37.000"	"30.000"	"0.0754352498672745"	"17"	"0"	"0.002933"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQGQPIDDLMPAQK"	"[R].lEQGQPIDDLmPAQk.[-]"	"N-Term(TMT6plex); M11(Oxidation); K15(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"719.72552"	"2157.16202"	"2157.16258"	"-0.26"	"-0.00018"	"9/150"	"9"	"150"	"195732.51574707"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"80.5144"	"27689"	"27689"	"27661"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.1"	""	"10.4"	""	"9.2"	""	"16.9"	""	"14.7"	"17.7"	""	"1242"	"16"	"37.000"	"30.000"	"1.47262307121589"	"16"	"0.001134"	"0.01401"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNAMVEEGHFAAEDVK"	"[K].gNAMVEEGHFAAEDVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"721.37067"	"2162.09745"	"2162.09522"	"1.03"	"0.00074"	"13/164"	"13"	"164"	"1323467.49041748"	"HCD"	"MS2"	"16.1678"	"56.6"	"100.000"	"65.0825"	"21439"	"21439"	"21421"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"84.9"	""	"70.7"	""	"60.0"	""	"71.6"	""	"121.9"	"128.9"	""	"1237"	"44"	"37.000"	"30.000"	"0.00234066738647522"	"17"	"0"	"2.088E-06"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDGLTALEATDNQAIK"	"[K].gPDGLTALEATDNQAIk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P62775"	"Myotrophin OS=Rattus norvegicus OX=10116 GN=Mtpn PE=1 SV=2"	"P62775"	"Myotrophin OS=Rattus norvegicus OX=10116 GN=Mtpn PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"724.73584"	"2172.19297"	"2172.19123"	"0.80"	"0.00058"	"8/154"	"8"	"154"	"81361.4231567383"	"HCD"	"MS2"	"12.8535"	"3.8"	"100.000"	"91.7639"	"32101"	"32101"	"32082"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.3"	""	"3.8"	""	"9.3"	""	"6.4"	""	"8.8"	"4.4"	""	"1152"	"18"	"37.000"	"30.000"	"0.904528975296126"	"16"	"0"	"0.001413"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPK.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.41321"	"2183.22507"	"2183.22734"	"-1.04"	"-0.00075"	"14/156"	"14"	"156"	"180063.811828613"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"79.2393"	"27178"	"27178"	"27153"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.5"	""	"3.8"	""	"4.7"	""	"12.1"	""	"6.9"	"5.7"	""	"1040"	"23"	"37.000"	"30.000"	"0.267918895182513"	"14"	"0"	"0.000181"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].VAPEEHPVLLTEAPLNPk.[A]"	"K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"728.41376"	"2183.22672"	"2183.22734"	"-0.28"	"-0.00021"	"10/156"	"10"	"156"	"390112.807312012"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"76.5225"	"26076"	"26076"	"26056"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.4"	""	"11.7"	""	"11.0"	""	"17.7"	""	"18.6"	"19.4"	""	"1027"	"24"	"37.000"	"30.000"	"0.186440581124447"	"16"	"0"	"0.0002266"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].VAPEEHPVLLTEAPLNPk.[A]"	"K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"728.41376"	"2183.22672"	"2183.22734"	"-0.28"	"-0.00021"	"10/156"	"10"	"156"	"507510.688903809"	"HCD"	"MS2"	"1.680859"	"11.5"	"100.000"	"76.4033"	"26036"	"26036"	"26019"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"15.0"	""	"16.6"	""	"12.0"	""	"21.7"	""	"22.8"	"22.2"	""	"1027"	"27"	"37.000"	"30.000"	"0.10978435329594"	"18"	"0"	"5.313E-05"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].VAPEEHPVLLTEAPLNPk.[A]"	"K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"728.41400"	"2183.22745"	"2183.22734"	"0.05"	"0.00004"	"4/156"	"4"	"156"	"229331.716369629"	"HCD"	"MS2"	"8.843364"	"7.1"	"100.000"	"76.1192"	"25922"	"25922"	"25898"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.3"	""	"6.3"	""	"7.6"	""	"11.7"	""	"16.3"	"14.8"	""	"1027"	"14"	"37.000"	"30.000"	"2.24667600998762"	"18"	"0.0008629"	"0.01064"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPK.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.41431"	"2183.22837"	"2183.22734"	"0.47"	"0.00034"	"13/156"	"13"	"156"	"199604.262634277"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"79.2047"	"27160"	"27160"	"27136"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.8"	""	"7.3"	""	"6.5"	""	"7.8"	""	"5.6"	"8.7"	""	"1006"	"24"	"37.000"	"30.000"	"0.205384651325344"	"14"	"0"	"3.613E-05"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].VAPEEHPVLLTEAPLNPk.[A]"	"K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"728.41479"	"2183.22983"	"2183.22734"	"1.14"	"0.00083"	"9/156"	"9"	"156"	"272424.275878906"	"HCD"	"MS2"	"6.642764"	"8.1"	"100.000"	"76.2287"	"25957"	"25957"	"25933"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.7"	""	"10.6"	""	"8.1"	""	"13.9"	""	"14.8"	"16.4"	""	"1006"	"39"	"37.000"	"30.000"	"0.00576193009547105"	"21"	"0"	"0.0001021"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSAATSTYEVGNPPDYR"	"[R].iDSAATSTYEVGNPPDYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"729.02344"	"2185.05576"	"2185.06106"	"-2.42"	"-0.00177"	"12/174"	"12"	"174"	"176347.975280762"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"75.5942"	"25699"	"25699"	"25675"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.2"	""	"1.5"	""	"4.9"	""	"9.2"	""	"12.4"	"13.8"	""	"823"	"51"	"36.000"	"29.000"	"0.000308581467140306"	"16"	"0"	"5.973E-06"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSAATSTYEVGNPPDYR"	"[R].iDSAATSTYEVGNPPDYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"729.02490"	"2185.06015"	"2185.06106"	"-0.41"	"-0.00030"	"10/174"	"10"	"174"	"173842.321899414"	"HCD"	"MS2"	"0"	"5.4"	"100.000"	"75.7501"	"25772"	"25772"	"25748"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.0"	""	"8.8"	""	"6.0"	""	"8.4"	""	"9.2"	"13.6"	""	"855"	"23"	"36.000"	"29.000"	"0.192280887966881"	"14"	"0"	"0.0002669"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSAATSTYEVGNPPDYR"	"[R].iDSAATSTYEVGNPPDYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"729.02496"	"2185.06034"	"2185.06106"	"-0.33"	"-0.00024"	"10/174"	"10"	"174"	"168911.044433594"	"HCD"	"MS2"	"6.680079"	"5.6"	"100.000"	"75.4387"	"25646"	"25646"	"25628"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.2"	""	"4.6"	""	"8.2"	""	"9.1"	""	"11.0"	"12.9"	""	"855"	"21"	"36.000"	"29.000"	"0.315454058380191"	"14"	"0"	"0.0001375"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSAATSTYEVGNPPDYR"	"[R].iDSAATSTYEVGNPPDYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"729.02515"	"2185.06089"	"2185.06106"	"-0.08"	"-0.00006"	"9/174"	"9"	"174"	"142757.220458984"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"75.9356"	"25838"	"25838"	"25807"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"5.4"	""	"5.2"	""	"8.1"	""	"10.5"	""	"9.5"	"13.9"	""	"856"	"23"	"36.000"	"29.000"	"0.214508135992473"	"14"	"0"	"0.0003877"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDDAIETDDLTIK"	"[K].nYTDDAIETDDLTIk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"729.04663"	"2185.12534"	"2185.12763"	"-1.05"	"-0.00076"	"11/160"	"11"	"160"	"253398.923217773"	"HCD"	"MS2"	"34.35643"	"7.8"	"100.000"	"93.6856"	"32840"	"32840"	"32825"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.5"	""	"6.5"	""	"7.2"	"1.9"	"17.2"	""	"15.8"	"14.8"	""	"1293"	"32"	"38.000"	"31.000"	"0.0369460938608362"	"17"	"0"	"0.000151"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDDAIETDDLTIK"	"[K].nYTDDAIETDDLTIk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"729.04724"	"2185.12717"	"2185.12763"	"-0.21"	"-0.00015"	"10/160"	"10"	"160"	"378706.143188477"	"HCD"	"MS2"	"25.32437"	"12.4"	"100.000"	"93.7987"	"32864"	"32864"	"32856"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.3"	""	"13.0"	""	"11.6"	""	"26.5"	""	"25.3"	"21.8"	""	"1292"	"31"	"38.000"	"31.000"	"0.0537319396132325"	"21"	"0"	"7.967E-05"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDFDPGQDTYQHPPK"	"[R].sDFDPGQDTYQHPPk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"730.69989"	"2190.08512"	"2190.08677"	"-0.75"	"-0.00055"	"10/144"	"10"	"144"	"914135.729858398"	"HCD"	"MS2"	"0"	"29.0"	"100.000"	"55.1889"	"17451"	"17451"	"17431"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"66.2"	""	"36.0"	""	"34.3"	""	"36.3"	"0.6"	"50.8"	"49.5"	""	"1103"	"49"	"37.000"	"30.000"	"0.000735437069838073"	"16"	"0"	"9.427E-07"	"1.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDFDPGQDTYQHPPK"	"[R].sDFDPGQDTYQHPPk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"730.70032"	"2190.08640"	"2190.08677"	"-0.17"	"-0.00012"	"10/144"	"10"	"144"	"850805.29107666"	"HCD"	"MS2"	"17.44259"	"27.7"	"100.000"	"55.5481"	"17598"	"17598"	"17574"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"79.0"	""	"27.9"	""	"29.7"	""	"35.0"	""	"49.6"	"41.9"	""	"1112"	"43"	"37.000"	"30.000"	"0.00260060738555682"	"15"	"0"	"1.653E-06"	"1.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDFDPGQDTYQHPPK"	"[R].sDFDPGQDTYQHPPk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"730.70160"	"2190.09024"	"2190.08677"	"1.59"	"0.00116"	"11/144"	"11"	"144"	"1436086.17913818"	"HCD"	"MS2"	"2.009127"	"47.7"	"100.000"	"55.6033"	"17606"	"17606"	"17586"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"97.9"	""	"55.4"	""	"57.5"	""	"62.5"	""	"87.0"	"94.3"	""	"1121"	"40"	"37.000"	"30.000"	"0.005909838554273"	"15"	"0"	"3.669E-05"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTGGVDTAAVGGVFDVSNADR"	"[R].gTGGVDTAAVGGVFDVSNADR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"732.03583"	"2194.09293"	"2194.09375"	"-0.38"	"-0.00028"	"16/202"	"16"	"202"	"312718.159729004"	"HCD"	"MS2"	"3.568561"	"4.7"	"100.000"	"90.0862"	"31451"	"31451"	"31437"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.7"	""	"6.1"	""	"4.4"	""	"6.5"	""	"10.7"	"9.4"	""	"1179"	"64"	"37.000"	"30.000"	"2.50890264542342E-05"	"22"	"0"	"9.897E-08"	"1.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTGGVDTAAVGGVFDVSNADR"	"[R].gTGGVDTAAVGGVFDVSNADR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.8113"	"0.0000"	"1"	"1"	"1"	"732.03619"	"2194.09403"	"2194.09375"	"0.12"	"0.00009"	"12/202"	"12"	"202"	"253781.332763672"	"HCD"	"MS2"	"1.968191"	"4.4"	"100.000"	"90.0963"	"31454"	"31454"	"31437"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.4"	""	"6.8"	""	"6.2"	""	"5.5"	""	"6.8"	"7.9"	""	"1185"	"53"	"37.000"	"30.000"	"0.000326353560120201"	"26"	"0"	"1.732E-06"	"1.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTGGVDTAAVGGVFDVSNADR"	"[R].gTGGVDTAAVGGVFDVSNADR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"732.03638"	"2194.09458"	"2194.09375"	"0.38"	"0.00027"	"9/202"	"9"	"202"	"113979.574584961"	"HCD"	"MS2"	"8.601523"	"3.9"	"100.000"	"90.3695"	"31561"	"31561"	"31548"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.7"	""	"6.1"	""	"3.9"	""	"6.4"	""	"7.6"	"9.1"	""	"1186"	"16"	"37.000"	"30.000"	"1.56334451179445"	"18"	"0"	"0.0003535"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDENQFVAVTSTNAAK"	"[K].mDENQFVAVTSTNAAk.[VI]"	"N-Term(TMT6plex); M1(Oxidation); K16(TMT6plex)"	"2"	"3"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62950; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"734.04816"	"2200.12992"	"2200.13200"	"-0.95"	"-0.00070"	"11/164"	"11"	"164"	"330013.437011719"	"HCD"	"MS2"	"37.12785"	"14.4"	"100.000"	"69.8882"	"23397"	"23397"	"23374"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.9"	""	"19.8"	""	"20.6"	""	"23.1"	""	"24.5"	"28.3"	""	"1232"	"36"	"37.000"	"30.000"	"0.01477681078116"	"16"	"0"	"1.947E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDENQFVAVTSTNAAK"	"[K].mDENQFVAVTSTNAAk.[VI]"	"N-Term(TMT6plex); M1(Oxidation); K16(TMT6plex)"	"2"	"3"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62950; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"734.04938"	"2200.13358"	"2200.13200"	"0.72"	"0.00053"	"7/164"	"7"	"164"	"248362.755371094"	"HCD"	"MS2"	"20.0607"	"11.9"	"100.000"	"69.9982"	"23428"	"23428"	"23401"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.1"	""	"11.2"	""	"15.5"	""	"20.6"	""	"22.1"	"30.4"	""	"1243"	"23"	"37.000"	"30.000"	"0.285391564978114"	"18"	"0"	"6.768E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADNFEYSDPVDGSISK"	"[K].aDNFEYSDPVDGSISk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"734.70270"	"2202.09354"	"2202.09666"	"-1.42"	"-0.00104"	"11/172"	"11"	"172"	"190464.925537109"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"87.0135"	"30264"	"30264"	"30241"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.7"	""	"12.6"	""	"10.3"	""	"10.2"	""	"11.4"	"14.6"	""	"1047"	"37"	"37.000"	"30.000"	"0.0116122582576541"	"18"	"0"	"0.0005316"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLNYQHSDGSYSTFGDR"	"[R].qLNYQHSDGSYSTFGDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"735.34387"	"2204.01706"	"2204.02059"	"-1.60"	"-0.00118"	"15/178"	"15"	"178"	"1810627.2210083"	"HCD"	"MS2"	"36.8487"	"69.4"	"100.000"	"52.8225"	"16477"	"16477"	"16455"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"99.7"	""	"106.8"	""	"89.9"	""	"101.9"	""	"134.1"	"130.3"	""	"532"	"29"	"34.000"	"27.000"	"0.0349045173139108"	"14"	"0"	"1.653E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPPSLRPAPPPISGGGYR"	"[K].eEPPSLRPAPPPISGGGYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"736.06506"	"2206.18064"	"2206.18178"	"-0.52"	"-0.00038"	"7/194"	"7"	"194"	"3257333.13909912"	"HCD"	"MS2"	"30.65233"	"76.1"	"100.000"	"64.5289"	"21218"	"21218"	"21199"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"103.6"	""	"97.4"	""	"82.3"	""	"140.5"	""	"167.7"	"135.5"	""	"1362"	"5"	"38.000"	"31.000"	"23.2888000351836"	"15"	"0"	"0.0001321"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPPSLRPAPPPISGGGYR"	"[K].eEPPSLRPAPPPISGGGYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.06543"	"2206.18174"	"2206.18178"	"-0.02"	"-0.00002"	"7/194"	"7"	"194"	"3213278.07501221"	"HCD"	"MS2"	"25.3602"	"73.1"	"100.000"	"64.6224"	"21242"	"21242"	"21223"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"111.2"	""	"86.3"	""	"86.6"	""	"124.4"	""	"161.9"	"127.6"	""	"1357"	"4"	"38.000"	"31.000"	"27.5771798838597"	"13"	"0"	"0.0005601"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPPSLRPAPPPISGGGYR"	"[K].eEPPSLRPAPPPISGGGYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"736.06555"	"2206.18210"	"2206.18178"	"0.15"	"0.00011"	"9/194"	"9"	"194"	"825974.598266602"	"HCD"	"MS2"	"11.71419"	"25.6"	"100.000"	"64.9492"	"21370"	"21370"	"21351"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"28.5"	""	"30.9"	""	"21.5"	""	"50.4"	"0.6"	"65.0"	"47.0"	""	"1356"	"17"	"38.000"	"31.000"	"1.3128940915558"	"15"	"0"	"0.0004148"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPPSLRPAPPPISGGGYR"	"[K].eEPPSLRPAPPPISGGGYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"736.06567"	"2206.18247"	"2206.18178"	"0.31"	"0.00023"	"16/194"	"16"	"194"	"1088841.31549072"	"HCD"	"MS2"	"6.736094"	"27.0"	"100.000"	"64.8500"	"21345"	"21345"	"21326"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"36.1"	""	"25.4"	""	"26.7"	""	"59.5"	""	"58.3"	"51.8"	""	"1360"	"20"	"38.000"	"31.000"	"0.759467008490781"	"17"	"0"	"0.0001158"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGLVDEVVPEDQVHSK"	"[K].vGLVDEVVPEDQVHSk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.74707"	"2208.22666"	"2208.22762"	"-0.44"	"-0.00032"	"12/148"	"12"	"148"	"244343.456420898"	"HCD"	"MS2"	"28.52113"	"9.9"	"100.000"	"81.5588"	"28109"	"28109"	"28093"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"17.0"	""	"11.9"	""	"16.3"	""	"15.0"	""	"15.2"	"18.9"	""	"1159"	"38"	"37.000"	"30.000"	"0.00916333238757187"	"15"	"0"	"2.72E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGLVDEVVPEDQVHSK"	"[K].vGLVDEVVPEDQVHSk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"3"	"3"	"0.7632"	"0.0000"	"1"	"1"	"1"	"736.74774"	"2208.22867"	"2208.22762"	"0.48"	"0.00035"	"14/148"	"14"	"148"	"323328.180053711"	"HCD"	"MS2"	"5.666026"	"13.6"	"100.000"	"81.6170"	"28135"	"28135"	"28116"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.5"	""	"12.7"	""	"19.7"	""	"28.6"	""	"23.1"	"29.3"	""	"1143"	"38"	"37.000"	"30.000"	"0.00843366283767174"	"24"	"0"	"1.416E-05"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"WLITTQLDQPAAIAVNPK"	"[K].WLITTqLDQPAAIAVNPk.[L]"	"Q6(Deamidated); K18(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"2"	"4"	"737.08594"	"2209.24326"	"2209.24299"	"0.12"	"0.00009"	"3/168"	"3"	"168"	"286665.295593262"	"HCD"	"MS2"	"1.172057"	"7.4"	"100.000"	"96.8524"	"33984"	"33984"	"33977"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.5"	""	"7.6"	""	"7.6"	""	"13.2"	""	"16.5"	"15.7"	""	"1069"	"2"	"37.000"	"30.000"	"34.5897728117618"	"13"	"0.009417"	"0.1233"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQYAPERPGPQPTAETTR"	"[K].vQYAPERPGPQPTAETTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P29066"	"Beta-arrestin-1 OS=Rattus norvegicus OX=10116 GN=Arrb1 PE=1 SV=1"	"P29066"	"Beta-arrestin-1 OS=Rattus norvegicus OX=10116 GN=Arrb1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.06018"	"2227.16599"	"2227.16686"	"-0.39"	"-0.00029"	"12/190"	"12"	"190"	"533069.36529541"	"HCD"	"MS2"	"12.13008"	"18.4"	"100.000"	"41.9737"	"12073"	"12073"	"12044"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"24.7"	""	"24.5"	""	"30.6"	""	"32.3"	""	"34.7"	"28.4"	""	"1347"	"24"	"38.000"	"31.000"	"0.2814087519365"	"14"	"0"	"1.236E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQYAPERPGPQPTAETTR"	"[K].vQYAPERPGPQPTAETTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P29066"	"Beta-arrestin-1 OS=Rattus norvegicus OX=10116 GN=Arrb1 PE=1 SV=1"	"P29066"	"Beta-arrestin-1 OS=Rattus norvegicus OX=10116 GN=Arrb1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.06085"	"2227.16800"	"2227.16686"	"0.51"	"0.00038"	"12/190"	"12"	"190"	"659758.320983887"	"HCD"	"MS2"	"53.05402"	"22.7"	"100.000"	"42.1282"	"12126"	"12126"	"12097"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"33.3"	""	"31.9"	""	"31.5"	""	"43.8"	""	"38.1"	"37.1"	""	"1371"	"17"	"38.000"	"31.000"	"1.32131832799239"	"14"	"0"	"0.0001418"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DREVGIPPEQSLETAK"	"[R].dREVGIPPEQSLETAk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.08301"	"2227.23447"	"2227.23343"	"0.47"	"0.00035"	"11/174"	"11"	"174"	"304188.692810059"	"HCD"	"MS2"	"15.56559"	"13.6"	"100.000"	"63.9503"	"20983"	"20983"	"20964"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"22.4"	""	"15.4"	""	"21.3"	""	"19.1"	""	"26.4"	"24.8"	""	"1132"	"7"	"37.000"	"30.000"	"10.9854140671751"	"13"	"0.0008629"	"0.01099"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DREVGIPPEQSLETAK"	"[R].dREVGIPPEQSLETAk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"1"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"743.08313"	"2227.23484"	"2227.23343"	"0.63"	"0.00047"	"9/174"	"9"	"174"	"263298.3671875"	"HCD"	"MS2"	"22.99985"	"14.7"	"100.000"	"64.0142"	"20995"	"20995"	"20967"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.6"	""	"17.7"	""	"20.7"	""	"26.3"	""	"23.0"	"27.9"	""	"1130"	"10"	"37.000"	"30.000"	"6.09604898059854"	"15"	"0.007339"	"0.08426"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAPIGPHLQSMPSEQIR"	"[R].eDAPIGPHLQSMPSEQIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"745.38617"	"2234.14396"	"2234.14368"	"0.12"	"0.00009"	"6/180"	"6"	"180"	"240761.021789551"	"HCD"	"MS2"	"22.03675"	"10.5"	"100.000"	"68.4549"	"22813"	"22813"	"22783"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"12.0"	""	"15.3"	""	"15.9"	""	"14.8"	""	"22.0"	"20.1"	""	"1256"	"35"	"37.000"	"30.000"	"0.0201817881826612"	"16"	"0"	"4.813E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSSHFNPDPDAETLYK"	"[K].gSSHFNPDPDAETLYk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.04742"	"2236.12772"	"2236.12863"	"-0.41"	"-0.00030"	"11/162"	"11"	"162"	"1084569.37231445"	"HCD"	"MS2"	"50.24379"	"35.6"	"100.000"	"66.3796"	"21967"	"21967"	"21949"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"57.2"	""	"39.0"	""	"47.7"	""	"59.7"	"1.1"	"66.8"	"65.5"	""	"1190"	"30"	"37.000"	"30.000"	"0.0552735000134062"	"14"	"0"	"2.426E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDHPEVPIPAESESVSR"	"[K].lFDHPEVPIPAESESVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.72418"	"2238.15799"	"2238.16038"	"-1.07"	"-0.00079"	"5/164"	"5"	"164"	"753608.137329102"	"HCD"	"MS2"	"3.141352"	"7.3"	"100.000"	"89.4333"	"31197"	"31197"	"31189"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.2"	""	"9.5"	""	"8.0"	""	"13.6"	""	"10.0"	"15.1"	""	"1282"	"25"	"38.000"	"31.000"	"0.204577576511959"	"14"	"0"	"2.805E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDHPEVPIPAESESVSR"	"[K].lFDHPEVPIPAESESVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.72473"	"2238.15964"	"2238.16038"	"-0.33"	"-0.00025"	"14/164"	"14"	"164"	"528049.74206543"	"HCD"	"MS2"	"7.533978"	"6.8"	"100.000"	"89.1687"	"31096"	"31096"	"31081"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.6"	""	"8.1"	""	"7.0"	""	"14.4"	""	"11.0"	"13.7"	""	"1288"	"30"	"38.000"	"31.000"	"0.0603789932460266"	"14"	"0"	"2.243E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDHPEVPIPAESESVSR"	"[K].lFDHPEVPIPAESESVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.72498"	"2238.16037"	"2238.16038"	"0.00"	"0.00000"	"15/164"	"15"	"164"	"649751.480041504"	"HCD"	"MS2"	"2.690912"	"5.6"	"100.000"	"89.4415"	"31200"	"31200"	"31185"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.1"	""	"8.1"	""	"9.3"	""	"8.0"	""	"5.3"	"13.9"	""	"1293"	"28"	"38.000"	"31.000"	"0.0932327574760827"	"14"	"0"	"3.205E-05"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDHPEVPIPAESESVSR"	"[K].lFDHPEVPIPAESESVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.72504"	"2238.16056"	"2238.16038"	"0.08"	"0.00006"	"15/164"	"15"	"164"	"456449.251586914"	"HCD"	"MS2"	"7.491648"	"4.7"	"100.000"	"89.1589"	"31090"	"31090"	"31080"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.8"	""	"9.5"	""	"5.3"	""	"8.9"	""	"6.5"	"10.0"	""	"1290"	"34"	"38.000"	"31.000"	"0.0259155072997566"	"15"	"0"	"3.315E-05"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEYEFLTPMEEAPK"	"[R].aEEYEFLTPMEEAPk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"3"	"3"	"0.7179"	"0.0000"	"1"	"1"	"1"	"748.04993"	"2242.13523"	"2242.13536"	"-0.06"	"-0.00004"	"12/132"	"12"	"132"	"476536.489013672"	"HCD"	"MS2"	"15.89847"	"12.0"	"100.000"	"106.1482"	"36893"	"36893"	"36889"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"20.2"	""	"15.1"	""	"17.3"	""	"14.0"	""	"22.2"	"26.1"	""	"1212"	"39"	"37.000"	"30.000"	"0.00764667485961945"	"26"	"0"	"0.0002474"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEYEFLTPMEEAPK"	"[R].aEEYEFLTPMEEAPk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"3"	"3"	"0.7027"	"0.0000"	"1"	"1"	"1"	"748.05005"	"2242.13559"	"2242.13536"	"0.11"	"0.00008"	"11/132"	"11"	"132"	"467408.084350586"	"HCD"	"MS2"	"16.23893"	"11.5"	"100.000"	"106.1126"	"36949"	"36949"	"36945"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"22.3"	""	"12.5"	""	"17.4"	""	"13.9"	""	"20.9"	"22.8"	""	"1218"	"37"	"37.000"	"30.000"	"0.0132928251631239"	"26"	"0"	"8.51E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEAAAERPGEAAVASSPSK"	"[K].gEAAAERPGEAAVASSPSk.[A]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"748.40607"	"2243.20365"	"2243.20319"	"0.20"	"0.00015"	"12/200"	"12"	"200"	"385152.432861328"	"HCD"	"MS2"	"0"	"24.1"	"100.000"	"39.6351"	"11112"	"11112"	"11085"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"25.0"	""	"16.8"	""	"27.0"	""	"48.5"	""	"57.7"	"56.4"	""	"1249"	"12"	"37.000"	"30.000"	"3.78035376283819"	"14"	"0"	"0.0001142"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.05939"	"2254.16361"	"2254.16653"	"-1.29"	"-0.00097"	"22/194"	"22"	"194"	"6521813.2567749"	"HCD"	"MS2"	"0"	"44.6"	"93.943"	"74.9480"	"25448"	"25448"	"25438"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"67.7"	""	"62.4"	""	"77.2"	""	"60.3"	""	"73.6"	"83.9"	""	"1290"	"61"	"38.000"	"31.000"	"4.88157217288528E-05"	"16"	"0"	"2.583E-07"	"1.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.29657"	"2254.16445"	"2254.16653"	"-0.92"	"-0.00052"	"13/194"	"13"	"194"	"286489.679443359"	"HCD"	"MS2"	"25.08478"	"7.6"	"100.000"	"75.2452"	"25557"	"25557"	"25534"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"12.4"	""	"7.6"	""	"8.4"	""	"7.8"	""	"14.5"	"22.7"	""	"1290"	"49"	"38.000"	"31.000"	"0.000844422340334617"	"16"	"0"	"1.873E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.29657"	"2254.16445"	"2254.16653"	"-0.92"	"-0.00052"	"10/194"	"10"	"194"	"403201.741210938"	"HCD"	"MS2"	"10.54292"	"6.7"	"100.000"	"75.0666"	"25496"	"25496"	"25476"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"7.7"	""	"7.3"	""	"8.4"	""	"7.0"	""	"15.8"	"17.7"	""	"1290"	"23"	"38.000"	"31.000"	"0.336945541904432"	"14"	"0"	"4.092E-05"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.05969"	"2254.16452"	"2254.16653"	"-0.89"	"-0.00067"	"22/194"	"22"	"194"	"3921387.72521973"	"HCD"	"MS2"	"0"	"58.0"	"100.000"	"74.6813"	"25346"	"25346"	"25335"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"76.5"	""	"74.6"	""	"81.6"	""	"96.4"	"1.1"	"107.0"	"112.6"	""	"1289"	"59"	"38.000"	"31.000"	"7.80230497073285E-05"	"16"	"0"	"1.119E-07"	"1.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.05975"	"2254.16471"	"2254.16653"	"-0.81"	"-0.00061"	"18/194"	"18"	"194"	"505583.232055664"	"HCD"	"MS2"	"1.413956"	"10.0"	"100.000"	"75.2552"	"25572"	"25572"	"25550"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.2"	""	"14.5"	""	"13.8"	""	"13.9"	""	"19.4"	"21.2"	""	"1289"	"54"	"38.000"	"31.000"	"0.000243345277051431"	"16"	"0"	"3.9E-06"	"0.992"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.06036"	"2254.16654"	"2254.16653"	"0.01"	"0.00000"	"22/194"	"22"	"194"	"4682896.91003418"	"HCD"	"MS2"	"0"	"51.8"	"100.000"	"74.8541"	"25399"	"25399"	"25388"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"70.3"	""	"65.7"	""	"70.8"	""	"81.4"	""	"105.8"	"101.2"	""	"1274"	"60"	"38.000"	"31.000"	"6.60905600876073E-05"	"16"	"0"	"3.719E-07"	"1.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.06042"	"2254.16672"	"2254.16653"	"0.09"	"0.00007"	"10/194"	"10"	"194"	"307933.47479248"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"75.4744"	"25650"	"25650"	"25627"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.4"	""	"13.8"	""	"14.6"	""	"8.2"	""	"15.1"	"16.7"	""	"1276"	"49"	"38.000"	"31.000"	"0.000777715364114065"	"16"	"0"	"4.021E-05"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.29724"	"2254.16713"	"2254.16653"	"0.27"	"0.00015"	"15/194"	"15"	"194"	"867981.06451416"	"HCD"	"MS2"	"40.18936"	"10.3"	"100.000"	"74.7275"	"25365"	"25365"	"25344"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.8"	""	"11.8"	""	"16.1"	""	"14.1"	""	"22.0"	"20.2"	""	"1275"	"38"	"38.000"	"31.000"	"0.00994214720552184"	"15"	"0"	"1.229E-06"	"1.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.06061"	"2254.16727"	"2254.16653"	"0.33"	"0.00025"	"22/194"	"22"	"194"	"4060272.47186279"	"HCD"	"MS2"	"0"	"29.5"	"100.000"	"75.1542"	"25521"	"25521"	"25505"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"40.8"	""	"43.1"	""	"50.3"	""	"43.3"	""	"49.0"	"54.7"	""	"1274"	"59"	"38.000"	"31.000"	"7.94583298572754E-05"	"16"	"0"	"6.348E-08"	"1.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.29749"	"2254.16811"	"2254.16653"	"0.70"	"0.00040"	"16/194"	"16"	"194"	"1086797.97674561"	"HCD"	"MS2"	"28.96579"	"9.7"	"100.000"	"74.9339"	"25431"	"25431"	"25409"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.5"	""	"10.4"	""	"13.6"	""	"14.3"	""	"16.8"	"23.6"	""	"1278"	"64"	"38.000"	"31.000"	"2.71957385992462E-05"	"16"	"0"	"2.945E-07"	"1.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEYEFLTPMEEAPK"	"[R].aEEYEFLTPmEEAPk.[G]"	"N-Term(TMT6plex); M10(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"753.38043"	"2258.12674"	"2258.13027"	"-1.56"	"-0.00118"	"12/132"	"12"	"132"	"245518.508972168"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"92.7234"	"32476"	"32476"	"32467"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"10.1"	""	"10.7"	""	"10.5"	""	"15.1"	""	"11.6"	"17.0"	""	"1140"	"39"	"37.000"	"30.000"	"0.00727570121022467"	"20"	"0"	"7.99E-05"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEYEFLTPMEEAPK"	"[R].aEEYEFLTPmEEAPk.[G]"	"N-Term(TMT6plex); M10(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"4"	"4"	"0.9643"	"0.0000"	"1"	"1"	"1"	"565.28754"	"2258.12832"	"2258.13027"	"-0.87"	"-0.00049"	"9/132"	"9"	"132"	"249630.045227051"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"92.5291"	"32399"	"32399"	"32377"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.0"	""	"6.0"	""	"6.6"	""	"13.8"	""	"11.0"	"9.8"	""	"1143"	"28"	"37.000"	"30.000"	"0.0941924806756829"	"15"	"0"	"3.888E-05"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEYEFLTPMEEAPK"	"[R].aEEYEFLTPmEEAPk.[G]"	"N-Term(TMT6plex); M10(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"753.38123"	"2258.12912"	"2258.13027"	"-0.51"	"-0.00038"	"11/132"	"11"	"132"	"461089.60534668"	"HCD"	"MS2"	"10.50107"	"10.1"	"100.000"	"92.5924"	"32413"	"32413"	"32402"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.6"	""	"12.4"	""	"7.2"	""	"24.9"	""	"18.6"	"19.4"	""	"1155"	"28"	"37.000"	"30.000"	"0.0892384438833434"	"14"	"0"	"7.275E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEYEFLTPMEEAPK"	"[R].aEEYEFLTPmEEAPk.[G]"	"N-Term(TMT6plex); M10(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"4"	"4"	"0.9375"	"0.0000"	"1"	"1"	"1"	"565.28784"	"2258.12954"	"2258.13027"	"-0.33"	"-0.00018"	"6/132"	"6"	"132"	"190166.30078125"	"HCD"	"MS2"	"6.374532"	"5.7"	"100.000"	"92.5113"	"32382"	"32382"	"32365"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.1"	""	"4.4"	""	"4.6"	""	"13.2"	""	"15.1"	"12.7"	""	"1149"	"16"	"37.000"	"30.000"	"1.46652689837889"	"14"	"0"	"0.0002621"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEYEFLTPMEEAPK"	"[R].aEEYEFLTPmEEAPk.[G]"	"N-Term(TMT6plex); M10(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"753.38141"	"2258.12967"	"2258.13027"	"-0.27"	"-0.00020"	"14/132"	"14"	"132"	"436503.074523926"	"HCD"	"MS2"	"7.2554"	"10.2"	"100.000"	"92.3418"	"32326"	"32326"	"32317"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.1"	""	"7.7"	""	"11.9"	""	"28.7"	""	"16.5"	"19.3"	""	"1149"	"44"	"37.000"	"30.000"	"0.00216416332516256"	"19"	"0"	"1.815E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEYEFLTPMEEAPK"	"[R].aEEYEFLTPmEEAPk.[G]"	"N-Term(TMT6plex); M10(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"753.38153"	"2258.13004"	"2258.13027"	"-0.10"	"-0.00008"	"10/132"	"10"	"132"	"397671.447143555"	"HCD"	"MS2"	"23.60608"	"8.9"	"100.000"	"92.2865"	"32294"	"32294"	"32283"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.2"	""	"12.4"	""	"9.6"	""	"21.8"	""	"13.4"	"16.9"	""	"1147"	"35"	"37.000"	"30.000"	"0.0187729888513014"	"19"	"0"	"0.0001111"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSDGIVAPGYEEEALK"	"[R].eVSDGIVAPGYEEEALk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"0.9032"	"0.0000"	"1"	"1"	"1"	"755.40521"	"2264.20108"	"2264.20621"	"-2.27"	"-0.00171"	"13/154"	"13"	"154"	"171272.978942871"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"93.2207"	"32651"	"32651"	"32637"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.5"	""	"5.1"	""	"7.0"	""	"7.2"	""	"8.3"	"9.0"	""	"1415"	"31"	"38.000"	"31.000"	"0.0516091188505107"	"18"	"0"	"0.00044"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSDGIVAPGYEEEALK"	"[R].eVSDGIVAPGYEEEALk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"755.40662"	"2264.20530"	"2264.20621"	"-0.41"	"-0.00031"	"10/154"	"10"	"154"	"136497.110778809"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"93.4988"	"32755"	"32755"	"32744"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.2"	""	"7.4"	""	"4.8"	""	"7.0"	""	"6.9"	"7.3"	""	"1411"	"17"	"38.000"	"31.000"	"1.35362079654289"	"17"	"0"	"0.001571"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSDGIVAPGYEEEALK"	"[R].eVSDGIVAPGYEEEALk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"755.40662"	"2264.20530"	"2264.20621"	"-0.41"	"-0.00031"	"13/154"	"13"	"154"	"202922.657165527"	"HCD"	"MS2"	"0"	"6.9"	"100.000"	"93.2547"	"32679"	"32679"	"32667"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.1"	""	"7.7"	""	"9.2"	""	"7.3"	""	"11.8"	"16.9"	""	"1411"	"33"	"38.000"	"31.000"	"0.034954010961278"	"21"	"0"	"7.143E-05"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAGEGPVLYEDPPDQK"	"[K].eAAGEGPVLYEDPPDQk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P43138"	"DNA-(apurinic or apyrimidinic site) lyase OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2"	"P43138"	"DNA-(apurinic or apyrimidinic site) lyase OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"758.39508"	"2273.17069"	"2273.17016"	"0.23"	"0.00018"	"9/158"	"9"	"158"	"126916.807922363"	"HCD"	"MS2"	"47.29039"	"7.2"	"100.000"	"73.0298"	"24677"	"24677"	"24652"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.1"	""	"7.9"	""	"12.0"	""	"11.7"	""	"13.5"	"15.0"	""	"1338"	"16"	"38.000"	"31.000"	"1.50808603292998"	"18"	"0"	"0.003019"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSIQHLPEQEEPEDSK"	"[R].gSIQHLPEQEEPEDSk.[G]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"761.05933"	"2281.16343"	"2281.17123"	"-3.42"	"-0.00260"	"12/170"	"12"	"170"	"306773.804016113"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"48.1649"	"14590"	"14590"	"14562"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.5"	""	"10.9"	""	"14.3"	""	"26.3"	""	"21.9"	"22.9"	""	"1352"	"25"	"38.000"	"31.000"	"0.190961886304302"	"14"	"0"	"0.0004397"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSIQHLPEQEEPEDSK"	"[R].gSIQHLPEQEEPEDSk.[G]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"761.06219"	"2281.17203"	"2281.17123"	"0.35"	"0.00027"	"10/170"	"10"	"170"	"243973.745361328"	"HCD"	"MS2"	"0"	"11.7"	"100.000"	"48.6542"	"14777"	"14777"	"14748"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"14.4"	""	"16.6"	""	"12.6"	""	"21.3"	""	"25.3"	"21.8"	""	"1400"	"33"	"38.000"	"31.000"	"0.0382030502763889"	"15"	"0"	"0.0006552"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVNEEESVHWQRPK"	"[K].dAVNEEESVHWQRPk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"0.9286"	"0.0000"	"1"	"1"	"1"	"571.30377"	"2282.19326"	"2282.19296"	"0.13"	"0.00007"	"11/148"	"11"	"148"	"5025729.1550293"	"HCD"	"MS2"	"11.82756"	"102.6"	"100.000"	"48.4207"	"14694"	"14694"	"14674"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"147.9"	""	"124.5"	""	"101.3"	""	"202.3"	"0.1"	"199.2"	"198.0"	""	"1321"	"28"	"38.000"	"31.000"	"0.106628382678389"	"16"	"0"	"7.889E-07"	"1.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPDDITNEEYGEFYK"	"[R].nPDDITNEEYGEFYk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"764.70654"	"2292.10508"	"2292.10723"	"-0.94"	"-0.00072"	"10/158"	"10"	"158"	"265688.877929688"	"HCD"	"MS2"	"8.043931"	"11.2"	"100.000"	"91.8285"	"32119"	"32119"	"32112"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"25.3"	""	"12.4"	""	"12.5"	""	"14.8"	""	"20.9"	"20.9"	""	"889"	"23"	"36.000"	"29.000"	"0.199008563706393"	"17"	"0"	"0.001406"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPDDITNEEYGEFYK"	"[R].nPDDITNEEYGEFYk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.70667"	"2292.10544"	"2292.10723"	"-0.78"	"-0.00060"	"10/158"	"10"	"158"	"233271.768981934"	"HCD"	"MS2"	"22.80659"	"9.0"	"100.000"	"91.5575"	"32017"	"32017"	"32011"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"13.8"	""	"12.4"	""	"14.2"	""	"13.1"	""	"16.3"	"16.4"	""	"886"	"26"	"36.000"	"29.000"	"0.109245542639481"	"14"	"0"	"0.00278"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPDDITNEEYGEFYK"	"[R].nPDDITNEEYGEFYk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"764.70709"	"2292.10672"	"2292.10723"	"-0.22"	"-0.00017"	"9/158"	"9"	"158"	"240093.36932373"	"HCD"	"MS2"	"21.62437"	"9.7"	"100.000"	"91.6152"	"32045"	"32045"	"32034"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"18.1"	""	"11.7"	""	"10.3"	""	"21.2"	""	"18.2"	"13.1"	""	"895"	"22"	"36.000"	"29.000"	"0.314624863148015"	"17"	"0.0001301"	"0.004854"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPDDITNEEYGEFYK"	"[R].nPDDITNEEYGEFYk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.70746"	"2292.10782"	"2292.10723"	"0.26"	"0.00020"	"11/158"	"11"	"158"	"270164.899047852"	"HCD"	"MS2"	"7.503289"	"10.7"	"100.000"	"91.9172"	"32160"	"32160"	"32145"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"19.8"	""	"12.9"	""	"13.2"	""	"17.3"	""	"17.7"	"20.7"	""	"895"	"22"	"36.000"	"29.000"	"0.316077105532675"	"14"	"0.0002479"	"0.005455"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEGGTTNPHVFPEGSEPK"	"[R].gEGGTTNPHVFPEGSEPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"B2RYG6"	"Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus OX=10116 GN=Otub1 PE=1 SV=1"	"B2RYG6"	"Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus OX=10116 GN=Otub1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"766.72974"	"2298.17466"	"2298.17665"	"-0.87"	"-0.00066"	"9/186"	"9"	"186"	"460372.459838867"	"HCD"	"MS2"	"13.42855"	"15.2"	"100.000"	"50.2706"	"15437"	"15437"	"15406"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"31.2"	""	"14.0"	""	"18.9"	""	"24.8"	""	"28.6"	"27.1"	""	"1251"	"30"	"37.000"	"30.000"	"0.0661039352013143"	"14"	"0"	"0.0001693"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEGGTTNPHVFPEGSEPK"	"[R].gEGGTTNPHVFPEGSEPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"B2RYG6"	"Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus OX=10116 GN=Otub1 PE=1 SV=1"	"B2RYG6"	"Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus OX=10116 GN=Otub1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"766.73071"	"2298.17759"	"2298.17665"	"0.41"	"0.00031"	"15/186"	"15"	"186"	"466561.233337402"	"HCD"	"MS2"	"0"	"15.9"	"100.000"	"49.8184"	"15264"	"15264"	"15238"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"26.1"	""	"16.3"	""	"24.2"	""	"26.1"	"1.1"	"32.0"	"24.4"	""	"1258"	"38"	"37.000"	"30.000"	"0.0090084618864306"	"15"	"0"	"5.247E-06"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEEAPGHRPTTNPNASK"	"[K].hEEAPGHRPTTNPNASk.[F]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"767.74188"	"2301.21109"	"2301.21001"	"0.47"	"0.00036"	"7/174"	"7"	"174"	"201614.152709961"	"HCD"	"MS2"	"40.95488"	"10.8"	"100.000"	"20.5419"	"3391"	"3391"	"3366"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.7"	""	"12.9"	""	"10.0"	""	"22.3"	""	"22.7"	"18.8"	""	"1313"	"7"	"38.000"	"31.000"	"11.9463361367746"	"14"	"0.0002479"	"0.005279"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEEAPGHRPTTNPNASK"	"[K].hEEAPGHRPTTnPNASk.[F]"	"N-Term(TMT6plex); N12(Deamidated); K17(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"768.07587"	"2302.21305"	"2302.19403"	"8.26"	"0.00634"	"8/174"	"8"	"174"	"236246.995056152"	"HCD"	"MS2"	"47.71347"	"17.2"	"100.000"	"20.4777"	"3365"	"3365"	"3344"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"23.4"	""	"19.3"	""	"18.6"	""	"38.3"	""	"40.4"	"24.3"	""	"1290"	"15"	"38.000"	"31.000"	"2.02096929218355"	"15"	"0.0001301"	"0.00479"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPDDITQEEYGEFYK"	"[R].nPDDITQEEYGEFYk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"769.37811"	"2306.11979"	"2306.12288"	"-1.34"	"-0.00103"	"9/158"	"9"	"158"	"111511.421813965"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"93.0512"	"32587"	"32587"	"32576"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.8"	""	"3.8"	""	"5.3"	""	"6.4"	""	"8.2"	"6.8"	""	"965"	"29"	"36.000"	"29.000"	"0.0666035407670892"	"15"	"0.0001301"	"0.004253"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPDDITQEEYGEFYK"	"[R].nPDDITQEEYGEFYk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"769.37823"	"2306.12015"	"2306.12288"	"-1.18"	"-0.00091"	"14/158"	"14"	"158"	"324298.03527832"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"93.3438"	"32697"	"32697"	"32687"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"16.1"	""	"14.2"	""	"10.5"	""	"21.3"	""	"20.9"	"20.8"	""	"969"	"42"	"36.000"	"29.000"	"0.00339073447063102"	"15"	"0"	"5.206E-05"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPDDITQEEYGEFYK"	"[R].nPDDITQEEYGEFYk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"769.37885"	"2306.12198"	"2306.12288"	"-0.39"	"-0.00030"	"10/158"	"10"	"158"	"204521.560791016"	"HCD"	"MS2"	"3.625909"	"6.8"	"100.000"	"93.0999"	"32619"	"32619"	"32605"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.1"	""	"7.8"	""	"8.9"	""	"8.3"	""	"12.4"	"12.6"	""	"977"	"29"	"36.000"	"29.000"	"0.0555730929124746"	"17"	"0"	"0.0009845"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPDDITQEEYGEFYK"	"[R].nPDDITQEEYGEFYk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"769.37915"	"2306.12290"	"2306.12288"	"0.01"	"0.00001"	"11/158"	"11"	"158"	"297780.546081543"	"HCD"	"MS2"	"1.925213"	"10.2"	"100.000"	"93.3728"	"32724"	"32724"	"32712"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"20.0"	""	"10.2"	""	"10.3"	""	"14.6"	""	"20.7"	"22.1"	""	"1001"	"38"	"36.000"	"30.000"	"0.00863781864941096"	"17"	"0"	"0.0006381"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLAVNQENEHLMEDYER"	"[K].vLAVNQENEHLMEDYER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"773.38068"	"2318.12748"	"2318.12843"	"-0.41"	"-0.00032"	"9/170"	"9"	"170"	"136089.883789063"	"HCD"	"MS2"	"44.41386"	"5.1"	"100.000"	"77.9939"	"26671"	"26671"	"26650"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.6"	""	"6.8"	""	"5.2"	""	"10.1"	""	"12.8"	"10.0"	""	"971"	"20"	"36.000"	"29.000"	"0.514267683573574"	"16"	"0"	"0.002278"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NALPAPSDDPTALMTDPK"	"[R].nALPAPSDDPTALmTDPk.[Y]"	"N-Term(TMT6plex); M14(Oxidation); K18(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"0.9032"	"0.0000"	"1"	"1"	"1"	"776.74231"	"2328.21238"	"2328.21573"	"-1.44"	"-0.00112"	"10/188"	"10"	"188"	"232706.748901367"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"79.2715"	"27191"	"27191"	"27169"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.0"	""	"12.4"	""	"9.3"	""	"18.3"	""	"14.2"	"11.6"	""	"1394"	"31"	"38.000"	"31.000"	"0.0496858561998184"	"17"	"0"	"0.0009605"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NALPAPSDDPTALMTDPK"	"[R].nALPAPSDDPTALmTDPk.[Y]"	"N-Term(TMT6plex); M14(Oxidation); K18(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"776.74298"	"2328.21439"	"2328.21573"	"-0.58"	"-0.00045"	"12/188"	"12"	"188"	"273473.116638184"	"HCD"	"MS2"	"11.29561"	"7.5"	"100.000"	"79.3382"	"27213"	"27213"	"27194"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"11.5"	""	"7.1"	""	"7.8"	""	"16.8"	""	"15.7"	"12.2"	""	"1417"	"32"	"38.000"	"31.000"	"0.0463809729326664"	"15"	"0"	"0.0003741"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHTSQSGDEMTSLSEYVSR"	"[R].yHTSQSGDEMTSLSEYVSR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"802.70691"	"2406.10617"	"2406.10808"	"-0.79"	"-0.00064"	"13/202"	"13"	"202"	"179149.655395508"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"72.6395"	"24504"	"24504"	"24483"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.9"	""	"8.5"	""	"9.0"	""	"4.0"	""	"11.2"	"7.3"	""	"588"	"32"	"34.000"	"27.000"	"0.0200607576077651"	"15"	"0"	"4.869E-05"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHTSQSGDEMTSLSEYVSR"	"[R].yHTSQSGDEMTSLSEYVSR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"802.70715"	"2406.10691"	"2406.10808"	"-0.49"	"-0.00039"	"11/202"	"11"	"202"	"129550.85345459"	"HCD"	"MS2"	"4.265745"	"3.8"	"100.000"	"72.6195"	"24510"	"24510"	"24481"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.1"	""	"5.7"	""	"5.0"	""	"6.8"	""	"7.7"	"6.8"	""	"588"	"19"	"34.000"	"27.000"	"0.3313960521156"	"16"	"0"	"0.000141"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAGSSGPGASSGPGGDHSDLIVR"	"[K].sLAGSSGPGASSGPGGDHSDLIVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.07666"	"2410.21543"	"2410.21599"	"-0.24"	"-0.00019"	"24/222"	"24"	"222"	"453877.99810791"	"HCD"	"MS2"	"11.52264"	"11.1"	"100.000"	"56.4947"	"17984"	"17984"	"17958"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"18.3"	""	"13.9"	""	"13.4"	""	"16.4"	""	"21.1"	"22.9"	""	"1353"	"93"	"38.000"	"31.000"	"3.3671913798825E-08"	"18"	"0"	"1.794E-09"	"1.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAGSSGPGASSGPGGDHSDLIVR"	"[K].sLAGSSGPGASSGPGGDHSDLIVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"3"	"3"	"0.9492"	"0.0000"	"1"	"1"	"1"	"804.07684"	"2410.21598"	"2410.21599"	"-0.01"	"-0.00001"	"19/222"	"19"	"222"	"425136.311584473"	"HCD"	"MS2"	"5.000381"	"14.9"	"100.000"	"56.9001"	"18135"	"18135"	"18115"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"21.9"	""	"16.5"	""	"17.7"	""	"24.7"	""	"31.4"	"30.8"	""	"1363"	"59"	"38.000"	"31.000"	"7.77080230222936E-05"	"19"	"0"	"7.619E-08"	"1.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAGSSGPGASSGPGGDHSDLIVR"	"[K].sLAGSSGPGASSGPGGDHSDLIVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.07715"	"2410.21689"	"2410.21599"	"0.37"	"0.00030"	"14/222"	"14"	"222"	"232839.889709473"	"HCD"	"MS2"	"100"	"7.7"	"100.000"	"56.6073"	"18016"	"18016"	"17988"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"13.0"	""	"4.5"	""	"12.0"	""	"15.5"	""	"14.5"	"13.9"	""	"1347"	"42"	"38.000"	"31.000"	"0.00388452213094681"	"15"	"0"	"1.568E-06"	"1.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHTSQSGDEMTSLSEYVSR"	"[R].yHTSQSGDEmTSLSEYVSR.[M]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"808.03857"	"2422.10117"	"2422.10300"	"-0.76"	"-0.00061"	"7/202"	"7"	"202"	"144342.139038086"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"55.4439"	"17542"	"17542"	"17511"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"7.9"	""	"2.8"	""	"7.4"	""	"6.7"	""	"9.8"	"12.1"	""	"495"	"26"	"33.000"	"26.000"	"0.0666154863971911"	"14"	"0"	"0.0009005"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHTSQSGDEMTSLSEYVSR"	"[R].yHTSQSGDEmTSLSEYVSR.[M]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"808.03864"	"2422.10135"	"2422.10300"	"-0.68"	"-0.00055"	"13/202"	"13"	"202"	"120529.732421875"	"HCD"	"MS2"	"60.41155"	"4.0"	"100.000"	"55.1334"	"17429"	"17429"	"17400"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"5.2"	""	"4.4"	""	"4.6"	""	"9.5"	""	"7.0"	"7.7"	""	"498"	"32"	"33.000"	"26.000"	"0.0143614849384671"	"15"	"0"	"1.98E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMGGPYGGGNYGPGGSGGSGGYGGR"	"[R].nmGGPYGGGNYGPGGSGGSGGYGGR.[S]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"1"	"1"	"812.35828"	"2435.06028"	"2435.06320"	"-1.20"	"-0.00097"	"5/246"	"5"	"246"	"85631.2719116211"	"HCD"	"MS2"	"0"	"1.8"	"100.000"	"45.7214"	"13595"	"13595"	"13566"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.9"	""	"2.3"	""	"3.0"	""	"2.0"	""	"2.8"	"3.5"	""	"289"	"0"	"31.000"	"24.000"	"13.6731269817357"	"13"	"0.0001301"	"0.004917"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMGGPYGGGNYGPGGSGGSGGYGGR"	"[R].nmGGPYGGGNYGPGGSGGSGGYGGR.[S]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.9649"	"0.0000"	"1"	"1"	"1"	"812.35913"	"2435.06284"	"2435.06320"	"-0.15"	"-0.00012"	"15/246"	"15"	"246"	"137024.75604248"	"HCD"	"MS2"	"48.90507"	"2.7"	"100.000"	"45.6132"	"13539"	"13539"	"13517"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.8"	""	"2.9"	""	"4.4"	""	"3.1"	""	"6.4"	"4.1"	""	"295"	"57"	"31.000"	"24.000"	"2.67788560259038E-05"	"18"	"0"	"1.244E-08"	"1.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMGGPYGGGNYGPGGSGGSGGYGGR"	"[R].nmGGPYGGGNYGPGGSGGSGGYGGR.[S]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"812.35931"	"2435.06339"	"2435.06320"	"0.08"	"0.00006"	"11/246"	"11"	"246"	"113830.372314453"	"HCD"	"MS2"	"40.17956"	"3.2"	"100.000"	"45.3877"	"13459"	"13459"	"13431"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"6.7"	""	"4.3"	""	"3.7"	""	"5.5"	""	"5.6"	"4.6"	""	"298"	"35"	"31.000"	"24.000"	"0.00435698704298656"	"15"	"0"	"2.074E-06"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGGGLPHWPEYDQK"	"[R].nGNPnGGGLPHWPEYDQk.[E]"	"N-Term(TMT6plex); N1(Deamidated); N5(Deamidated); K18(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"814.06427"	"2440.17826"	"2440.19336"	"-6.19"	"-0.00503"	"6/174"	"6"	"174"	"338367.868530273"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"83.1447"	"28741"	"28741"	"28728"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"15.1"	""	"7.4"	""	"12.8"	""	"10.4"	""	"15.7"	"12.4"	""	"972"	"15"	"36.000"	"29.000"	"1.57629054031784"	"13"	"0.003189"	"0.03198"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGGGLPHWPEYDQK"	"[R].nGNPnGGGLPHWPEYDQk.[E]"	"N-Term(TMT6plex); N1(Deamidated); N5(Deamidated); K18(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.0556"	"0.0000"	"1"	"1"	"1"	"814.06531"	"2440.18137"	"2440.19336"	"-4.91"	"-0.00400"	"9/174"	"9"	"174"	"298414.616149902"	"HCD"	"MS2"	"0"	"6.9"	"100.000"	"83.1852"	"28758"	"28758"	"28743"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"11.6"	""	"7.6"	""	"10.7"	""	"15.6"	""	"11.2"	"9.0"	""	"976"	"18"	"36.000"	"29.000"	"0.771649043163946"	"15"	"0.001635"	"0.0196"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGGGLPHWPEYDQK"	"[R].nGNPnGGGLPHWPEYDQk.[E]"	"N-Term(TMT6plex); N1(Deamidated); N5(Deamidated); K18(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"814.06671"	"2440.18558"	"2440.19336"	"-3.19"	"-0.00259"	"8/174"	"8"	"174"	"97782.90625"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"82.8533"	"28627"	"28627"	"28611"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"4.6"	""	"4.2"	""	"3.3"	""	"3.7"	""	"3.0"	"5.5"	""	"987"	"15"	"36.000"	"29.000"	"1.61542632922707"	"13"	"0.00447"	"0.04871"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGGGLPHWPEYDQK"	"[R].nGNPnGGGLPHWPEYDQk.[E]"	"N-Term(TMT6plex); N1(Deamidated); N5(Deamidated); K18(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"814.06836"	"2440.19052"	"2440.19336"	"-1.16"	"-0.00094"	"5/174"	"5"	"174"	"89312.0170898438"	"HCD"	"MS2"	"55.87883"	"3.4"	"100.000"	"81.8147"	"28215"	"28215"	"28190"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.7"	""	"3.9"	""	"6.9"	""	"5.5"	""	"5.6"	"5.9"	""	"1029"	"2"	"37.000"	"30.000"	"33.1425087107559"	"13"	"0.006958"	"0.08058"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGGGLPHWPEYDQK"	"[R].nGnPNGGGLPHWPEYDQk.[E]"	"N-Term(TMT6plex); N1(Deamidated); N3(Deamidated); K18(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"2"	"2"	"814.06836"	"2440.19052"	"2440.19336"	"-1.16"	"-0.00094"	"5/174"	"5"	"174"	"89312.0170898438"	"HCD"	"MS2"	"55.87883"	"3.4"	"100.000"	"81.8147"	"28215"	"28215"	"28190"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.7"	""	"3.9"	""	"6.9"	""	"5.5"	""	"5.6"	"5.9"	""	"1029"	"2"	"37.000"	"30.000"	"33.1425087107559"	"13"	"0.006958"	"0.08058"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGGGLPHWPEYDQK"	"[R].nGNPnGGGLPHWPEYDQk.[E]"	"N-Term(TMT6plex); N1(Deamidated); N5(Deamidated); K18(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"814.06897"	"2440.19236"	"2440.19336"	"-0.41"	"-0.00033"	"8/174"	"8"	"174"	"89717.6920776367"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"83.4524"	"28858"	"28858"	"28848"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"8.5"	""	"5.1"	""	"3.5"	""	"4.3"	""	"4.3"	"2.5"	""	"1050"	"15"	"37.000"	"30.000"	"1.66402291809783"	"13"	"0.001036"	"0.01346"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIDDGTSDRPYSHALVAGIDR"	"[K].nIDDGTSDRPYSHALVAGIDR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.06921"	"2501.25503"	"2501.25819"	"-1.27"	"-0.00079"	"20/234"	"20"	"234"	"1438222.75732422"	"HCD"	"MS2"	"44.59956"	"15.1"	"100.000"	"62.4894"	"20373"	"20373"	"20351"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"24.8"	""	"13.4"	""	"20.8"	""	"28.3"	""	"28.6"	"28.0"	""	"1326"	"30"	"38.000"	"31.000"	"0.0667595696448747"	"14"	"0"	"3.068E-07"	"1.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIDDGTSDRPYSHALVAGIDR"	"[K].nIDDGTSDRPYSHALVAGIDR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.06976"	"2501.25722"	"2501.25819"	"-0.39"	"-0.00024"	"14/234"	"14"	"234"	"1733100.92340088"	"HCD"	"MS2"	"0"	"16.5"	"100.000"	"62.5037"	"20395"	"20395"	"20375"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"33.9"	""	"15.1"	""	"23.8"	""	"26.0"	""	"31.0"	"27.1"	""	"1329"	"30"	"38.000"	"31.000"	"0.065237150813678"	"14"	"0"	"7.643E-07"	"1.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPLAGTNGETTTQGLDGLSER"	"[K].gVVPLAGTNGETTTQGLDGLSER.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"834.43909"	"2501.30271"	"2501.30448"	"-0.71"	"-0.00059"	"19/232"	"19"	"232"	"309850.603149414"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"92.2791"	"32302"	"32302"	"32291"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.4"	""	"3.7"	""	"5.1"	""	"2.5"	""	"2.1"	"3.8"	""	"1418"	"64"	"38.000"	"31.000"	"2.76468868553669E-05"	"19"	"0"	"9.835E-07"	"1.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPLAGTNGETTTQGLDGLSER"	"[K].gVVPLAGTNGETTTQGLDGLSER.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.43939"	"2501.30362"	"2501.30448"	"-0.34"	"-0.00028"	"12/232"	"12"	"232"	"121253.023803711"	"HCD"	"MS2"	"0"	"0.3"	"100.000"	"91.9633"	"32171"	"32171"	"32158"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"3.4"	""	""	""	""	""	""	""	""	""	""	"1422"	"53"	"38.000"	"31.000"	"0.000331031712494824"	"16"	"0"	"1.689E-06"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPLAGTNGETTTQGLDGLSER"	"[K].gVVPLAGTNGETTTQGLDGLSER.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"834.44000"	"2501.30545"	"2501.30448"	"0.39"	"0.00033"	"11/232"	"11"	"232"	"180598.913024902"	"HCD"	"MS2"	"0"	"1.1"	"100.000"	"92.2470"	"32279"	"32279"	"32269"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"1.9"	""	"1.9"	""	""	""	"1.9"	""	"1.9"	"2.7"	""	"1431"	"58"	"38.000"	"31.000"	"0.000113660519862171"	"20"	"0"	"1.229E-07"	"1.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPLAGTNGETTTQGLDGLSER"	"[K].gVVPLAGTNGETTTQGLDGLSER.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.44080"	"2501.30783"	"2501.30448"	"1.34"	"0.00112"	"12/232"	"12"	"232"	"128277.803833008"	"HCD"	"MS2"	"0"	"1.0"	"100.000"	"91.9938"	"32190"	"32190"	"32173"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"1.8"	""	""	""	""	""	"2.8"	""	"2.3"	"3.1"	""	"1426"	"52"	"38.000"	"31.000"	"0.000401873648603906"	"16"	"0"	"2.131E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPLAGTNGETTTQGLDGLSER"	"[K].gVVPLAGTNGETTTqGLDGLSER.[C]"	"N-Term(TMT6plex); Q15(Deamidated)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.0278"	"0.0000"	"1"	"1"	"1"	"834.76654"	"2502.28507"	"2502.28849"	"-1.37"	"-0.00114"	"11/232"	"11"	"232"	"121989.196960449"	"HCD"	"MS2"	"5.481266"	"0.5"	"100.000"	"97.7943"	"34274"	"34274"	"34269"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	""	""	"3.1"	""	"1.9"	""	""	"1435"	"36"	"38.000"	"31.000"	"0.0200826909683766"	"15"	"0"	"0.0007444"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPLAGTNGETTTQGLDGLSER"	"[K].gVVPLAGTnGETTTQGLDGLSER.[C]"	"N-Term(TMT6plex); N9(Deamidated)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	""	"0.0278"	"2"	"2"	"2"	"834.76654"	"2502.28507"	"2502.28849"	"-1.37"	"-0.00114"	"11/232"	"11"	"232"	"121989.196960449"	"HCD"	"MS2"	"5.481266"	"0.5"	"100.000"	"97.7943"	"34274"	"34274"	"34269"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	""	""	""	""	""	""	"3.1"	""	"1.9"	""	""	"1435"	"35"	"38.000"	"31.000"	"0.0204090084459388"	"15"	"0"	"0.0003619"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPLAGTNGETTTQGLDGLSER"	"[K].gVVPLAGTNGETTTqGLDGLSER.[C]"	"N-Term(TMT6plex); Q15(Deamidated)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.1000"	"0.0000"	"1"	"1"	"1"	"834.76776"	"2502.28873"	"2502.28849"	"0.10"	"0.00008"	"12/232"	"12"	"232"	"125175.339111328"	"HCD"	"MS2"	"6.099313"	"1.0"	"100.000"	"97.6959"	"34265"	"34265"	"34258"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	""	""	"1.9"	""	"1.7"	""	"3.3"	""	""	"3.1"	""	"1452"	"40"	"38.000"	"31.000"	"0.00790563247760073"	"17"	"0"	"5.052E-05"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEPGVDPDDTYNETPYEK"	"[K].iEPGVDPDDTYNETPYEk.[G]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"847.41895"	"2540.24228"	"2540.24445"	"-0.85"	"-0.00072"	"11/178"	"11"	"178"	"120744.666748047"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"86.5918"	"30097"	"30097"	"30079"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"6.7"	""	"3.6"	""	"7.4"	""	"5.6"	""	"6.1"	"4.3"	""	"1153"	"22"	"37.000"	"30.000"	"0.34182144962037"	"14"	"0.001886"	"0.02178"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEPGVDPDDTYNETPYEK"	"[K].iEPGVDPDDTYNETPYEk.[G]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"847.42010"	"2540.24576"	"2540.24445"	"0.52"	"0.00044"	"5/178"	"5"	"178"	"83460.8666992188"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"86.5898"	"30092"	"30092"	"30078"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"2.4"	""	"4.7"	""	"5.9"	""	"3.0"	""	"5.9"	"4.2"	""	"1173"	"12"	"37.000"	"30.000"	"4.02038844814486"	"18"	"0.000936"	"0.01331"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGPGGGGPGGGGASGGPSQPPGGGGPGIR"	"[R].gGGGPGGGGPGGGGASGGPSQPPGGGGPGIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"852.75415"	"2556.24790"	"2556.25009"	"-0.86"	"-0.00073"	"23/268"	"23"	"268"	"358224.271362305"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"41.8493"	"12022"	"12022"	"12001"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"9.7"	""	"7.2"	""	"3.7"	""	"4.2"	""	"8.8"	"8.2"	""	"1102"	"65"	"37.000"	"30.000"	"1.6298648690699E-05"	"17"	"0"	"2.77E-10"	"1.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGPGGGGPGGGGASGGPSQPPGGGGPGIR"	"[R].gGGGPGGGGPGGGGASGGPSQPPGGGGPGIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"852.75598"	"2556.25339"	"2556.25009"	"1.29"	"0.00110"	"20/268"	"20"	"268"	"442943.617675781"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"41.9716"	"12062"	"12062"	"12033"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"8.0"	""	"8.1"	""	"8.2"	""	"6.5"	""	"7.2"	"9.8"	""	"1143"	"44"	"37.000"	"30.000"	"0.00221317744072704"	"15"	"0"	"1.188E-07"	"1.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESEGSPDTDAAPGPDTDVTLTK"	"[K].eSEGSPDTDAAPGPDTDVTLTk.[D]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"887.77545"	"2661.31180"	"2661.31432"	"-0.95"	"-0.00084"	"11/208"	"11"	"208"	"154172.921447754"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"73.6126"	"24900"	"24900"	"24875"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"3.0"	""	"6.5"	""	"3.2"	""	"10.4"	""	"8.9"	"8.5"	""	"1256"	"24"	"37.000"	"30.000"	"0.248290237402784"	"14"	"0"	"0.0001303"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESEGSPDTDAAPGPDTDVTLTK"	"[K].eSEGSPDTDAAPGPDTDVTLTk.[D]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"887.77679"	"2661.31583"	"2661.31432"	"0.57"	"0.00050"	"8/208"	"8"	"208"	"114182.107788086"	"HCD"	"MS2"	"59.03592"	"2.7"	"100.000"	"73.4265"	"24838"	"24838"	"24807"	"20190226_COPD_TMTPOOLED_F2-01.raw"	"F3"	"4.8"	""	"3.0"	""	"2.1"	""	"4.8"	""	"6.9"	"4.4"	""	"1284"	"15"	"38.000"	"31.000"	"1.83457312884672"	"13"	"0"	"0.0009995"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SATAATVPPAAPAGEGGPPAPPPNLTSNR"	"[].sATAATVPPAAPAGEGGPPAPPPnLTSNR.[]"	"N-Term(TMT6plex); N24(Deamidated)"	"0"	"0"	""	""	""	""	"0"	"6"	"6"	""	"0.0000"	"3"	"3"	"3"	"483.59430"	"2896.52941"	"2896.50022"	"10.08"	"0.00487"	"4/286"	"4"	"286"	"2439171.59051514"	"HCD"	"MS2"	"67.8056"	"70.3"	"100.000"	"31.9280"	"7989"	"7989"	"7961"	"20190226_COPD_TMTPOOLED_F2-02.raw"	"F4"	"107.8"	""	"84.9"	""	"81.5"	""	"113.2"	""	"143.0"	"136.7"	""	"1472"	"1"	"38.000"	"31.000"	"60.5170590361044"	"14"	"0.005427"	"0.06165"	"0.074"