Sequence N-term cleavage window C-term cleavage window Amino acid before First amino acid Second amino acid Second last amino acid Last amino acid Amino acid after A Count R Count N Count D Count C Count Q Count E Count G Count H Count I Count L Count K Count M Count F Count P Count S Count T Count W Count Y Count V Count U Count O Count Length Missed cleavages Mass Proteins Leading razor protein Start position End position Gene names Protein names Unique (Groups) Unique (Proteins) Charges PEP Score Experiment 191220_hirano_14_10 Intensity Intensity 191220_hirano_14_10 Reverse Potential contaminant id Protein group IDs Mod. peptide IDs Evidence IDs MS/MS IDs Best MS/MS Phospho (ST) site IDs Phospho (STY) site IDs MS/MS Count AAQLGSSFIAQLK IAALEVIRDEKLCQRAAQLGSSFIAQLKAL QRAAQLGSSFIAQLKALQAKSNGIISEVRG R A A L K A 3 0 0 0 0 2 0 1 0 1 2 1 0 1 0 2 0 0 0 0 0 0 13 0 1332.7402 P07991 P07991 329 341 CAR2 Ornithine aminotransferase yes yes 2 4.4827E-09 197.73 1 0 0 0 17 0 0 0 0 1 AAVEEGILPGGGTALVK GEKKDRYDDALNATRAAVEEGILPGGGTAL VEEGILPGGGTALVKASRVLDEVVVDNFDQ R A A V K A 3 0 0 0 0 0 2 4 0 1 2 1 0 0 1 0 1 0 0 2 0 0 17 0 1580.8774 P19882 P19882 427 443 HSP60 Heat shock protein 60, mitochondrial yes yes 2 0.012367 106.79 1 503740 503740 1 24 1 1 1 1 1 ADPLVSLMMVEK LRSDSYMLHKVLENKADPLVSLMMVEKVPD ENKADPLVSLMMVEKVPDSTYDMVGGLTKQ K A D E K V 1 0 0 1 0 0 1 0 0 0 2 1 2 0 1 1 0 0 0 2 0 0 12 0 1331.6829 Q01939 Q01939 130 141 RPT6 26S protease regulatory subunit 8 homolog yes yes 2 0.0029416 126.19 1 6484600 6484600 2 47 2 2 2 2 1 ADTLTDEINFLR DVDAAYMNKVELQAKADTLTDEINFLRALY QAKADTLTDEINFLRALYDAELSQMQTHIS K A D L R A 1 1 1 2 0 0 1 0 0 1 2 0 0 1 0 0 2 0 0 0 0 0 12 0 1406.7042 CON__P02538;CON__P48668;CON__P04259 CON__P02538 288 299 yes no 2 4.2132E-07 194.12 1 412540 412540 + 3 2 3 3 3 3 1 AEAESLYQSK AEVKAQNEDIAQKSKAEAESLYQSKYEELQ AQKSKAEAESLYQSKYEELQITAGRHGDSV K A E S K Y 2 0 0 0 0 1 2 0 0 0 1 1 0 0 0 2 0 0 1 0 0 0 10 0 1124.535 CON__P04264 CON__P04264 367 376 yes yes 2 7.2919E-10 251.98 1 6128400 6128400 + 4 4 4 4 4 4 1 AIGGGLSSVGGGSSTIK SGLGVGGGFSSSSGRAIGGGLSSVGGGSST GGGLSSVGGGSSTIKYTTTSSSSRKSYKH_ R A I I K Y 1 0 0 0 0 0 0 6 0 2 1 1 0 0 0 4 1 0 0 1 0 0 17 0 1446.7678 CON__P02538;CON__P48668 CON__P02538 534 550 yes no 2 6.1637E-11 215.02 1 3093300 3093300 + 5 2 5 5 5 5 1 AISLGLLK ATHLPKDNVEHLVMRAISLGLLKGSIDQVN VEHLVMRAISLGLLKGSIDQVNELVTISWV R A I L K G 1 0 0 0 0 0 0 1 0 1 3 1 0 0 0 1 0 0 0 0 0 0 8 0 813.53239 Q04062 Q04062 331 338 RPN9 26S proteasome regulatory subunit RPN9 yes yes 2 0.016202 115.46 1 1260900 1260900 6 49 6 6 6 6 1 ALEEANADLEVK QNLNDRLASYLDKVRALEEANADLEVKIRD KVRALEEANADLEVKIRDWYQRQRPAEIKD R A L V K I 3 0 1 1 0 0 3 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 12 0 1300.6511 CON__P08779;CON__P19012;CON__P02533;CON__Q6IFX2 CON__P02533 135 146 no no 2 3.2459E-05 167.2 1 2451700 2451700 + 7 5;1 7 7 7 7 1 ALEESNYELEGK QNLNDRLASYLDKVRALEESNYELEGKIKE KVRALEESNYELEGKIKEWYEKHGNSHQGE R A L G K I 1 0 1 0 0 0 4 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 12 0 1380.6409 CON__P13645;CON__P02535-1 CON__P13645 166 177 yes no 2 7.9731E-08 222.18 1 14488000 14488000 + 8 6 8 8 8 8 1 ALQSIGQLIGEVMK RDLEKLYDKTENDIKALQSIGQLIGEVMKE KALQSIGQLIGEVMKELSEEKYIVKASSGP K A L M K E 1 0 0 0 0 2 1 2 0 2 2 1 1 0 0 1 0 0 0 1 0 0 14 0 1485.8225 P53549 P53549 97 110 RPT4 26S protease subunit RPT4 yes yes 2 0.0019724 126.83 1 42286 42286 9 46 9 9 9 9 1 ALTEQAQTLTLSSR YSAVNQGHCHPHIIKALTEQAQTLTLSSRA KALTEQAQTLTLSSRAFHNDVYAQFAKFVT K A L S R A 2 1 0 0 0 2 1 0 0 0 3 0 0 0 0 2 3 0 0 0 0 0 14 0 1517.8049 P07991 P07991 68 81 CAR2 Ornithine aminotransferase yes yes 2 0.00020638 151.66 1 1182400 1182400 10 17 10 10 10 10 1 AMEVDEKPTETYSDVGGLDK LILDTLPSEFDSRVKAMEVDEKPTETYSDV EKPTETYSDVGGLDKQIEELVEAIVLPMKR K A M D K Q 1 0 0 3 0 0 3 2 0 0 1 2 1 0 1 1 2 0 1 2 0 0 20 1 2182.994 P33297 P33297 169 188 RPT5 26S protease regulatory subunit 6A yes yes 3 7.7528E-07 164.5 1 8978000 8978000 11 32 11 11 11 11 1 AMLINLILR KFLKIASLKHDNETKAMLINLILRDFLNNG HDNETKAMLINLILRDFLNNGEVDSASDFI K A M L R D 1 1 1 0 0 0 0 0 0 2 3 0 1 0 0 0 0 0 0 0 0 0 9 0 1055.6525 P40016 P40016 231 239 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 0.0062774 134.06 1 82264 82264 12 38 12 12 12 12 1 APSTYGGGLSVSSR GSSRISSVLAGGSCRAPSTYGGGLSVSSRF RAPSTYGGGLSVSSRFSSGGACGLGGGYGG R A P S R F 1 1 0 0 0 0 0 3 0 0 1 0 0 0 1 4 1 0 1 1 0 0 14 0 1337.6575 CON__P08779 CON__P08779 42 55 yes yes 2 0.00028835 150.51 1 1349800 1349800 + 13 5 13 13 13 13 1 APSTYGGGLSVSSSR GSSRISSVLAGGSCRAPSTYGGGLSVSSSR APSTYGGGLSVSSSRFSSGGAYGLGGGYGG R A P S R F 1 1 0 0 0 0 0 3 0 0 1 0 0 0 1 5 1 0 1 1 0 0 15 0 1424.6896 CON__P02533 CON__P02533 42 56 yes yes 2 2.1633E-10 224.25 1 2069400 2069400 + 14 1 14 14 14 14 1 APTIIFIDELDAIGTK GAKLVRDAFALAKEKAPTIIFIDELDAIGT PTIIFIDELDAIGTKRFDSEKSGDREVQRT K A P T K R 2 0 0 2 0 0 1 1 0 4 1 1 0 1 1 0 2 0 0 0 0 0 16 0 1715.9346 P33297 P33297 274 289 RPT5 26S protease regulatory subunit 6A yes yes 2 9.7822E-07 182.1 1 71458 71458 15 32 15 15 15 15 1 AQFETLTAPLVK ADASGPKHINMKFSRAQFETLTAPLVKRTV FSRAQFETLTAPLVKRTVDPVKKALKDAGL R A Q V K R 2 0 0 0 0 1 1 0 0 0 2 1 0 1 1 0 2 0 0 1 0 0 12 0 1316.734 P0CS90 P0CS90 326 337 SSC1 Heat shock protein SSC1, mitochondrial yes yes 2 3.3487E-10 229.82 1 920460 920460 16 18 16 16 16 16 1 AQFQELDSK SKDFDESLKYLDDLKAQFQELDSKKQRNNG YLDDLKAQFQELDSKKQRNNGSKDHGDGIL K A Q S K K 1 0 0 1 0 2 1 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 9 0 1064.5138 Q04062 Q04062 104 112 RPN9 26S proteasome regulatory subunit RPN9 yes yes 2 0.0068208 131.62 1 3627400 3627400 17 49 17 17 17 17 1 AQILQIHSR LDRKIEFPLPSEDSRAQILQIHSRKMTTDD PSEDSRAQILQIHSRKMTTDDDINWQELAR R A Q S R K 1 1 0 0 0 2 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 0 9 0 1064.6091 P33297 P33297 358 366 RPT5 26S protease regulatory subunit 6A yes yes 2 0.00087268 159.28 1 1793500 1793500 18 32 18 18 18 18 1 AQYEEIANR NNRNLDLDSIIAEVKAQYEEIANRSRTEAE IIAEVKAQYEEIANRSRTEAESWYQTKYEE K A Q N R S 2 1 1 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 9 0 1092.52 CON__P13647 CON__P13647 344 352 yes yes 2 0.0011556 168.26 1 2680100 2680100 + 19 7 19 19 19 19 1 AQYEEIAQR NSRNLDLDSIIAEVKAQYEEIAQRSKEEAE IIAEVKAQYEEIAQRSKEEAEALYHSKYEE K A Q Q R S 2 1 0 0 0 2 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 9 0 1106.5356 CON__P35908v2;CON__P35908;CON__P19013;CON__P02538;CON__P48668;CON__P04259 CON__P35908v2 354 362 no no 2 0.00058643 181.55 1 3871100 3871100 + 20 10;2 20 20 20 20 1 ASLENSLEETK MQNLEIELQSQLSMKASLENSLEETKGRYC LSMKASLENSLEETKGRYCMQLAQIQEMIG K A S T K G 1 0 1 0 0 0 3 0 0 0 2 1 0 0 0 2 1 0 0 0 0 0 11 0 1219.5932 CON__P08779;CON__Q9Z2K1;CON__Q3ZAW8;CON__P02533 CON__P02533 353 363 no no 2 1.254E-06 196.44 1 1541400 1541400 + 21 5;1 21 21 21 21 1 ATAGDTHLGGEDFDNR DVSLLSIEDGIFEVKATAGDTHLGGEDFDN TAGDTHLGGEDFDNRLVNHFIQEFKRKNKK K A T N R L 2 1 1 3 0 0 1 3 1 0 1 0 0 1 0 0 2 0 0 0 0 0 16 0 1674.7234 P10592;P10591;P09435 P10592 218 233 SSA2;SSA1;SSA3 Heat shock protein SSA2;Heat shock protein SSA1;Heat shock protein SSA3 yes no 3 0.0033271 110.55 1 1291300 1291300 22 19 22 22 22 22 1 AVANQTSATFLR ILYGAPGTGKTLLAKAVANQTSATFLRIVG LAKAVANQTSATFLRIVGSELIQKYLGDGP K A V L R I 3 1 1 0 0 1 0 0 0 0 1 0 0 1 0 1 2 0 0 1 0 0 12 0 1277.6728 P40327 P40327 235 246 RPT2 26S protease regulatory subunit 4 homolog yes yes 2 2.171E-10 242.49 1 6336500 6336500 23 39 23 23 23 23 1 AVAVVVDPIQSVK VDVNTQKSFEQLNSRAVAVVVDPIQSVKGK SRAVAVVVDPIQSVKGKVVIDAFRLIDTGA R A V V K G 2 0 0 1 0 1 0 0 0 1 0 1 0 0 1 1 0 0 0 5 0 0 13 0 1323.7762 P43588 P43588 136 148 RPN11 Ubiquitin carboxyl-terminal hydrolase RPN11 yes yes 2 1.7458E-05 155 1 1054300 1054300 24 41 24 24 24 24 1 DAEAWFNEK NMRSQYEQLAEQNRKDAEAWFNEKSKELTT AEQNRKDAEAWFNEKSKELTTEIDNNIEQI K D A E K S 2 0 1 1 0 0 2 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 9 0 1108.4825 CON__P13645;CON__Q148H6;CON__Q7Z3Y7;CON__Q7Z3Z0;CON__Q7Z3Y8 CON__P13645 335 343 yes no 2 3.4047E-07 229.33 1 9493300 9493300 + 25 6 25 25 25 25 1 DAEEWFFTK EMRDQYEKMAEKNRKDAEEWFFTKTEELNR AEKNRKDAEEWFFTKTEELNREVATNSELV K D A T K T 1 0 0 1 0 0 2 0 0 0 0 1 0 2 0 0 1 1 0 0 0 0 9 0 1171.5186 CON__P02533;CON__Q6IFX2 CON__P02533 301 309 yes no 2 0.0011997 167.23 1 142090 142090 + 26 1 26 26 26 26 1 DAEFVEAGVTK LKSTLAALAPAFTKKDAEFVEAGVTKSCLT FTKKDAEFVEAGVTKSCLTSTSGHTNIFHT K D A T K S 2 0 0 1 0 0 2 1 0 0 0 1 0 1 0 0 1 0 0 2 0 0 11 0 1164.5663 Q03661 Q03661 744 754 ESC1 Silent chromatin protein ESC1 yes yes 2 1.9316E-05 185.61 1 839580 839580 27 48 27 27 27 27 1 DAESAISIDPSYFR AAAHSSLKEYDQAVKDAESAISIDPSYFRG KDAESAISIDPSYFRGYSRLGFAKYAQGKP K D A F R G 2 1 0 2 0 0 1 0 0 2 0 0 0 1 1 3 0 0 1 0 0 0 14 0 1569.7311 Q12118 Q12118 158 171 SGT2 Small glutamine-rich tetratricopeptide repeat-containing protein 2 yes yes 2 1.3287E-09 214.67 1 1757500 1757500 28 56 28 28 28 28 1 DAETWFLSK EMRDQYEQMAEKNRRDAETWFLSKTEELNK AEKNRRDAETWFLSKTEELNKEVASNSELV R D A S K T 1 0 0 1 0 0 1 0 0 0 1 1 0 1 0 1 1 1 0 0 0 0 9 0 1095.5237 CON__P08779 CON__P08779 303 311 yes yes 2 0.00054428 182.53 1 238290 238290 + 29 5 29 29 29 29 1 DAFALAK QLVQMYIGEGAKLVRDAFALAKEKAPTIIF GEGAKLVRDAFALAKEKAPTIIFIDELDAI R D A A K E 3 0 0 1 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 7 0 734.39629 P33297 P33297 265 271 RPT5 26S protease regulatory subunit 6A yes yes 2 0.011748 138.48 1 6564000 6564000 30 32 30 30 30 30 1 DAFLGSFLYEYSR FAEDKDVCKNYQEAKDAFLGSFLYEYSRRH AKDAFLGSFLYEYSRRHPEYAVSVLLRLAK K D A S R R 1 1 0 1 0 0 1 1 0 0 2 0 0 2 0 2 0 0 2 0 0 0 13 0 1566.7355 CON__P02769 CON__P02769 347 359 yes yes 2 5.4281E-06 180.19 1 69618 69618 + 31 3 31 31 31;32 32 2 DAGQIVGLNVLR TVPAYFNDSQRQATKDAGQIVGLNVLRVVN ATKDAGQIVGLNVLRVVNEPTAAALAYGLE K D A L R V 1 1 1 1 0 1 0 2 0 1 2 0 0 0 0 0 0 0 0 2 0 0 12 0 1253.7092 P0CS90 P0CS90 184 195 SSC1 Heat shock protein SSC1, mitochondrial yes yes 2 3.7658E-07 197.79 1 965030 965030 32 18 32 32 33 33 1 DDRDHINPDDLMK DIRNCATEAGFFAIRDDRDHINPDDLMKAV IRDDRDHINPDDLMKAVRKVAEVKKLEGTI R D D M K A 0 1 1 5 0 0 0 0 1 1 1 1 1 0 1 0 0 0 0 0 0 0 13 1 1582.7046 P53549 P53549 405 417 RPT4 26S protease subunit RPT4 yes yes 3 0.00096894 127.71 1 1621600 1621600 33 46 33 33 34 34 1 DDSPDLPK EKQEPERNECFLSHKDDSPDLPKLKPDPNT ECFLSHKDDSPDLPKLKPDPNTLCDEFKAD K D D P K L 0 0 0 3 0 0 0 0 0 0 1 1 0 0 2 1 0 0 0 0 0 0 8 0 885.40798 CON__P02769 CON__P02769 131 138 yes yes 2 0.01006 131.03 1 1588000 1588000 + 34 3 34 34 35 35 1 DFLNNGEVDSASDFISK HDNETKAMLINLILRDFLNNGEVDSASDFI LNNGEVDSASDFISKLEYPHTDVSSSLEAR R D F S K L 1 0 2 3 0 0 1 1 0 1 1 1 0 2 0 3 0 0 0 1 0 0 17 0 1856.8428 P40016 P40016 240 256 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 8.5323E-24 267.07 1 1485100 1485100 35 38 35 35 36;37 36 2 DHFINKLDAGK LMNDVMSLGIHRLWKDHFINKLDAGKRPNS RLWKDHFINKLDAGKRPNSTTPLNFIDVAG K D H G K R 1 0 1 2 0 0 0 1 1 1 1 2 0 1 0 0 0 0 0 0 0 0 11 1 1256.6513 P49017 P49017 95 105 COQ5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial yes yes 2 0.0061502 125.31 1 2765900 2765900 36 42 36 36 38;39 39 2 DHGDGILLIDSEIAR FQELDSKKQRNNGSKDHGDGILLIDSEIAR DHGDGILLIDSEIARTYLLKNDLVKARDLL K D H A R T 1 1 0 3 0 0 1 2 1 3 2 0 0 0 0 1 0 0 0 0 0 0 15 0 1622.8264 Q04062 Q04062 121 135 RPN9 26S proteasome regulatory subunit RPN9 yes yes 2;3 9.158E-07 188.15 2 1111500 1111500 37 49 37 37;38 40;41 40 2 DHGLLAK KANGKTAWDLCLLMKDHGLLAKPTHDHIIR WDLCLLMKDHGLLAKPTHDHIIRLAPPLVI K D H A K P 1 0 0 1 0 0 0 1 1 0 2 1 0 0 0 0 0 0 0 0 0 0 7 0 752.41809 P07991 P07991 384 390 CAR2 Ornithine aminotransferase yes yes 2 0.021137 114.59 1 244100 244100 38 17 38 39 42 42 1 DLLDDLEK IARTYLLKNDLVKARDLLDDLEKTLDKKDS NDLVKARDLLDDLEKTLDKKDSIPLRITNS R D L E K T 0 0 0 3 0 0 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 8 0 959.48114 Q04062 Q04062 148 155 RPN9 26S proteasome regulatory subunit RPN9 yes yes 2 0.019214 113.41 1 528760 528760 39 49 39 40 43 43 1 DNVEHLVMR MLSFEDISKATHLPKDNVEHLVMRAISLGL ATHLPKDNVEHLVMRAISLGLLKGSIDQVN K D N M R A 0 1 1 1 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 2 0 0 9 0 1111.5444 Q04062 Q04062 322 330 RPN9 26S proteasome regulatory subunit RPN9 yes yes 2 0.0118 106.88 1 0 0 40 49 40 41 44 44 1 DSLALINDLLR SIKLATLHYQKKQYKDSLALINDLLREFKK KQYKDSLALINDLLREFKKLDDKPSLVDVH K D S L R E 1 1 1 2 0 0 0 0 0 1 4 0 0 0 0 1 0 0 0 0 0 0 11 0 1241.698 Q12377 Q12377 153 163 RPN6 26S proteasome regulatory subunit RPN6 yes yes 2 8.9301E-05 162.36 1 197470 197470 41 58 41 42 45 45 1 DSYLILDTLPSEFDSR DPDKLKPNDLVGVNKDSYLILDTLPSEFDS SYLILDTLPSEFDSRVKAMEVDEKPTETYS K D S S R V 0 1 0 3 0 0 1 0 0 1 3 0 0 1 1 3 1 0 1 0 0 0 16 0 1869.8996 P33297 P33297 151 166 RPT5 26S protease regulatory subunit 6A yes yes 2;3 9.3241E-11 265.53 2 559750 559750 42 32 42 43;44 46;47;48;49 47 4 DVDGAYMTK NKRTNAENEFVTIKKDVDGAYMTKVDLQAK FVTIKKDVDGAYMTKVDLQAKLDNLQQEID K D V T K V 1 0 0 2 0 0 0 1 0 0 0 1 1 0 0 0 1 0 1 1 0 0 9 0 998.4379 CON__P04264 CON__P04264 290 298 yes yes 2 0.013809 114.89 1 2527800 2527800 + 43 4 43 45 50 50 1 DYELAINK AEDLKMQGNKAMANKDYELAINKYTEAIKV NKAMANKDYELAINKYTEAIKVLPTNAIYY K D Y N K Y 1 0 1 1 0 0 1 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 8 0 964.48656 Q12118 Q12118 117 124 SGT2 Small glutamine-rich tetratricopeptide repeat-containing protein 2 yes yes 2 0.0013859 181.49 1 2436200 2436200 44 56 44 46 51 51 1 DYTTVPR VRRAAVIALGFVLLRDYTTVPRIVQLLSKS ALGFVLLRDYTTVPRIVQLLSKSHNAHVRC R D Y P R I 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 2 0 1 1 0 0 7 0 850.41848 P32565 P32565 598 604 RPN2 26S proteasome regulatory subunit RPN2 yes yes 2 0.026931 110.61 1 1078900 1078900 45 31 45 47 52 52 1 EALDFFSR INIKGSYVGNRADTREALDFFSRGLIKSPI GNRADTREALDFFSRGLIKSPIKIVGLSEL R E A S R G 1 1 0 1 0 0 1 0 0 0 1 0 0 2 0 1 0 0 0 0 0 0 8 0 983.47125 P07246 P07246 331 338 ADH3 Alcohol dehydrogenase 3, mitochondrial yes yes 2 0.010682 128.61 1 1263500 1263500 46 16 46 48 53 53 1 EDSYYQWQGK TVVGAGSSQPINVIKEDSYYQWQGKKTSAQ INVIKEDSYYQWQGKKTSAQYYVNNAGVSV K E D G K K 0 0 0 1 0 2 1 1 0 0 0 1 0 0 0 1 0 1 2 0 0 0 10 0 1302.5517 P36135 P36135 250 259 UTH1 Probable secreted beta-glucosidase UTH1 yes yes 2 0.0048669 129.42 1 364140 364140 47 35 47 49 54 54 1 EHAPSIIFMDEIDSIGSTR GEGSRMVRELFVMAREHAPSIIFMDEIDSI SIIFMDEIDSIGSTRVEGSGGGDSEVQRTM R E H T R V 1 1 0 2 0 0 2 1 1 4 0 0 1 1 1 3 1 0 0 0 0 0 19 0 2117.0099 Q01939 Q01939 239 257 RPT6 26S protease regulatory subunit 8 homolog yes yes 3 0.00011144 147.49 1 553040 553040 48 47 48 50 55 55 1 EIKEVIELPVK DSTYDMVGGLTKQIKEIKEVIELPVKHPEL KQIKEIKEVIELPVKHPELFESLGIAQPKG K E I V K H 0 0 0 0 0 0 3 0 0 2 1 2 0 0 1 0 0 0 0 2 0 0 11 1 1295.7701 Q01939 Q01939 159 169 RPT6 26S protease regulatory subunit 8 homolog yes yes 2;3 4.4866E-05 182.28 2 10385000 10385000 49 47 49 51;52 56;57 57 2 EKAPTIIFIDELDAIGTK GEGAKLVRDAFALAKEKAPTIIFIDELDAI PTIIFIDELDAIGTKRFDSEKSGDREVQRT K E K T K R 2 0 0 2 0 0 2 1 0 4 1 2 0 1 1 0 2 0 0 0 0 0 18 1 1973.0721 P33297 P33297 272 289 RPT5 26S protease regulatory subunit 6A yes yes 2;3 0.00046645 188.9 2 295120 295120 50 32 50 53;54 58;59 58 2 EKLEAVNSMIEK IARLGFFYNDQLYVKEKLEAVNSMIEKGGD YVKEKLEAVNSMIEKGGDWERRNRYKTYYG K E K E K G 1 0 1 0 0 0 3 0 0 1 1 2 1 0 0 1 0 0 0 1 0 0 12 1 1389.7174 Q06103 Q06103 189 200 RPN7 26S proteasome regulatory subunit RPN7 yes yes 2;3 5.7815E-07 220.29 2 4180600 4180600 51 50 51 55;56 60;61 60 2 ELEQLVEFNR CFMHLLVQLFLWDSKELEQLVEFNRKVVIP LWDSKELEQLVEFNRKVVIPNLLCYYNLRS K E L N R K 0 1 1 0 0 1 3 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 10 0 1275.6459 P40016 P40016 151 160 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 4.7352E-15 298.58 1 6323600 6323600 52 38 52 57 62 62 1 ELEQLVEFNRK CFMHLLVQLFLWDSKELEQLVEFNRKVVIP WDSKELEQLVEFNRKVVIPNLLCYYNLRSL K E L R K V 0 1 1 0 0 1 3 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 11 1 1403.7409 P40016 P40016 151 161 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 0.016087 90.149 1 541060 541060 53 38 53 58 63 63 1 ELFVMAR ELVQKYIGEGSRMVRELFVMAREHAPSIIF GEGSRMVRELFVMAREHAPSIIFMDEIDSI R E L A R E 1 1 0 0 0 0 1 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 7 0 864.45276 Q01939 Q01939 232 238 RPT6 26S protease regulatory subunit 8 homolog yes yes 2 0.0078043 153.61 1 36730000 36730000 54 47 54 59 64 64 1 ELPINHTILGK KLKDVVEYLDKVINKELPINHTILGKLQDV VINKELPINHTILGKLQDVFNLLPNLGTPD K E L G K L 0 0 1 0 0 0 1 1 1 2 2 1 0 0 1 0 1 0 0 0 0 0 11 0 1233.7081 Q08723 Q08723 218 228 RPN8 26S proteasome regulatory subunit RPN8 yes yes 2 2.0964E-06 188.91 1 5457000 5457000 55 53 55 60 65 65 1 ENAPSIIFIDEVDSIATK GEGPRMVRDVFRLARENAPSIIFIDEVDSI PSIIFIDEVDSIATKRFDAQTGSDREVQRI R E N T K R 2 0 1 2 0 0 2 0 0 4 0 1 0 1 1 2 1 0 0 1 0 0 18 0 1960.9993 P33298 P33298 263 280 RPT3 26S protease regulatory subunit 6B homolog yes yes 2 0.00049691 144.18 1 106080 106080 56 33 56 61 66;67 66 2 ENSESTTQGGNVNLDNTAVGK ANVVEVMDMNEIEDKENSESTTQGGNVNLD TQGGNVNLDNTAVGKAAVVKTSSRQTVFLP K E N G K A 1 0 4 1 0 1 2 3 0 0 1 1 0 0 0 2 3 0 0 2 0 0 21 0 2133.9774 P33297 P33297 95 115 RPT5 26S protease regulatory subunit 6A yes yes 3 2.7929E-08 190.1 1 1869200 1869200 57 32 57 62 68 68 1 EPDLTIKDFLKAIK AIEMSWTDIEADELKEPDLTIKDFLKAIKS KEPDLTIKDFLKAIKSTRPTVNEDDLLKQE K E P I K S 1 0 0 2 0 0 1 0 0 2 2 3 0 1 1 0 1 0 0 0 0 0 14 2 1629.9342 P52917 P52917 398 411 VPS4 Vacuolar protein sorting-associated protein 4 yes yes 3 0.03101 55.291 1 0 0 58 43 58 63 69 69 5 0 EPVALIETVR KGNNGVVVLRDREPKEPVALIETVRQMKDV DREPKEPVALIETVRQMKDVNAPLPTPFKV K E P V R Q 1 1 0 0 0 0 2 0 0 1 1 0 0 0 1 0 1 0 0 2 0 0 10 0 1125.6394 P32565 P32565 912 921 RPN2 26S proteasome regulatory subunit RPN2 yes yes 2 0.0055896 125.57 1 3438700 3438700 59 31 59 64 70 70 1 EQDALFITR RLAQLLRQLASYYSREQDALFITRLAQGLL ASYYSREQDALFITRLAQGLLHLGKGTMTM R E Q T R L 1 1 0 1 0 1 1 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 9 0 1091.5611 P38764 P38764 841 849 RPN1 26S proteasome regulatory subunit RPN1 yes yes 2 0.0054095 137.95 1 3974300 3974300 60 36 60 65 71 71 1 ESTLHLVLR QLEDGRTLSDYNIQKESTLHLVLRLRGGII DYNIQKESTLHLVLRLRGGIIEPSLKALAS K E S L R L 0 1 0 0 0 0 1 0 1 0 3 0 0 0 0 1 1 0 0 1 0 0 9 0 1066.6135 P0CH09;P0CH08;P05759;P0CG63 P0CH09 64 72 RPL40B;RPL40A;RPS31;UBI4 Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S31;Ubiquitin;40S ribosomal protein S31;Polyubiquitin;Ubiquitin yes no 2 0.0020504 153.04 1 624610 624610 61 14 61 66 72 72 1 EVASNSELVQSSR DAETWFLSKTEELNKEVASNSELVQSSRSE NKEVASNSELVQSSRSEVTELRRVLQGLEI K E V S R S 1 1 1 0 0 1 2 0 0 0 1 0 0 0 0 4 0 0 0 2 0 0 13 0 1404.6845 CON__P08779 CON__P08779 318 330 yes yes 2 2.579E-19 293.71 1 350460 350460 + 62 5 62 67 73 73 1 EVATNSELVQSGK DAEEWFFTKTEELNREVATNSELVQSGKSE NREVATNSELVQSGKSEISELRRTMQNLEI R E V G K S 1 0 1 0 0 1 2 1 0 0 1 1 0 0 0 2 1 0 0 2 0 0 13 0 1360.6834 CON__P02533;CON__Q04695;CON__Q9QWL7 CON__P02533 316 328 yes no 2 7.9692E-14 250.26 1 1433700 1433700 + 63 1 63 68 74 74 1 EVFTSSSSSSSR HLSSQQASGQSYSSREVFTSSSSSSSRQTR SSREVFTSSSSSSSRQTRPILKEQSSSSFS R E V S R Q 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 7 1 0 0 1 0 0 12 0 1259.563 CON__P08779 CON__P08779 442 453 yes yes 2 0.0011766 143.4 1 478950 478950 + 64 5 64 69 75 75 1 EVIELPLK FDGIGGLTEQIRELREVIELPLKNPEIFQR EQIRELREVIELPLKNPEIFQRVGIKPPKG R E V L K N 0 0 0 0 0 0 2 0 0 1 2 1 0 0 1 0 0 0 0 1 0 0 8 0 939.56408 P53549 P53549 195 202 RPT4 26S protease subunit RPT4 yes yes 2 0.0039555 155.51 1 1945200 1945200 65 46 65 70 76 76 1 EVIELPLKNPEIFQR FDGIGGLTEQIRELREVIELPLKNPEIFQR EVIELPLKNPEIFQRVGIKPPKGVLLYGPP R E V Q R V 0 1 1 0 0 1 3 0 0 2 2 1 0 1 2 0 0 0 0 1 0 0 15 1 1824.0145 P53549 P53549 195 209 RPT4 26S protease subunit RPT4 yes yes 2 5.2568E-06 174.9 1 929540 929540 66 46 66 71 77 77 1 EVIELPVK YDMVGGLTKQIKEIKEVIELPVKHPELFES KQIKEIKEVIELPVKHPELFESLGIAQPKG K E V V K H 0 0 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 0 0 2 0 0 8 0 925.54843 Q01939 Q01939 162 169 RPT6 26S protease regulatory subunit 8 homolog yes yes 2 0.021561 111.82 1 220170000 220170000 67 47 67 72 78 78 1 EVIELPVKHPELFESLGIAQPK YDMVGGLTKQIKEIKEVIELPVKHPELFES KHPELFESLGIAQPKGVILYGPPGTGKTLL K E V P K G 1 0 0 0 0 1 4 1 1 2 3 2 0 1 3 1 0 0 0 2 0 0 22 1 2472.3628 Q01939 Q01939 162 183 RPT6 26S protease regulatory subunit 8 homolog yes yes 3 3.4736E-07 174.65 1 569870 569870 68 47 68 73 79 79 1 EVVELPLLSPER YSDVGGCKDQIEKLREVVELPLLSPERFAT KLREVVELPLLSPERFATLGIDPPKGILLY R E V E R F 0 1 0 0 0 0 3 0 0 0 3 0 0 0 2 1 0 0 0 2 0 0 12 0 1379.766 P33299 P33299 223 234 RPT1 26S protease regulatory subunit 7 homolog yes yes 2 4.3931E-07 192.64 1 2134400 2134400 69 34 69 74 80 80 1 EYELLTLQEDYIKDEQR NVNSDIYFKLKKLEKEYELLTLQEDYIKDE ELLTLQEDYIKDEQRHLKRELKRAQEEVKR K E Y Q R H 0 1 0 2 0 2 4 0 0 1 3 1 0 0 0 0 1 0 2 0 0 0 17 1 2184.0586 P33298 P33298 57 73 RPT3 26S protease regulatory subunit 6B homolog yes yes 3 0.012159 92.265 1 384010 384010 70 33 70 75 81 81 1 FASFIDK VKAQEREQIKTLNNKFASFIDKVRFLEQQN QIKTLNNKFASFIDKVRFLEQQNQVLQTKW K F A D K V 1 0 0 1 0 0 0 0 0 1 0 1 0 2 0 1 0 0 0 0 0 0 7 0 826.4225 CON__P35908v2;CON__P35908;CON__Q3TTY5;CON__P12035;CON__Q01546;CON__Q5XKE5;CON__P19013;CON__P02538;CON__P48668;CON__P04259;CON__O95678;CON__Q8VED5;CON__P13647 CON__P35908v2 189 195 no no 2 0.012965 133.81 1 1696800 1696800 + 71 10;2;7 71 76 82 82 1 FATLGIDPPK KLREVVELPLLSPERFATLGIDPPKGILLY LSPERFATLGIDPPKGILLYGPPGTGKTLC R F A P K G 1 0 0 1 0 0 0 1 0 1 1 1 0 1 2 0 1 0 0 0 0 0 10 0 1057.5808 P33299 P33299 235 244 RPT1 26S protease regulatory subunit 7 homolog yes yes 2 0.00011184 169.09 1 3461600 3461600 72 34 72 77 83 83 1 FDDGAGGDNEVQR CIIFFDEIDAVGGARFDDGAGGDNEVQRTM ARFDDGAGGDNEVQRTMLELITQLDGFDPR R F D Q R T 1 1 1 3 0 1 1 3 0 0 0 0 0 1 0 0 0 0 0 1 0 0 13 0 1378.5749 P33299 P33299 319 331 RPT1 26S protease regulatory subunit 7 homolog yes yes 2 6.0221E-14 254.07 1 3834700 3834700 73 34 73 78 84 84 1 FIKDELR RRLEAQRNALNDKVRFIKDELRLLQEPGSY NALNDKVRFIKDELRLLQEPGSYVGEVIKI R F I L R L 0 1 0 1 0 0 1 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 7 1 919.51272 Q01939 Q01939 57 63 RPT6 26S protease regulatory subunit 8 homolog yes yes 2 0.021649 125.81 1 335650000 335650000 74 47 74 79 85 85 1 FILALNDEGEPIK HHQLFYMLNAGIRPKFILALNDEGEPIKVN PKFILALNDEGEPIKVNVRVGQAVETVGQA K F I I K V 1 0 1 1 0 0 2 1 0 2 2 1 0 1 1 0 0 0 0 0 0 0 13 0 1457.7766 P38764 P38764 912 924 RPN1 26S proteasome regulatory subunit RPN1 yes yes 2 9.4111E-10 222.18 1 2315300 2315300 75 36 75 80 86 86 1 FITSNHK VLYPDSSSFKKNLLKFITSNHKSSVPGSAE SFKKNLLKFITSNHKSSVPGSAELRNSYPA K F I H K S 0 0 1 0 0 0 0 0 1 1 0 1 0 1 0 1 1 0 0 0 0 0 7 0 845.43955 P40016 P40016 95 101 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 0.011652 138.85 1 2300400 2300400 76 38 76 81 87 87 1 FKDLGEEHFK GVFRRDTHKSEIAHRFKDLGEEHFKGLVLI EIAHRFKDLGEEHFKGLVLIAFSQYLQQCP R F K F K G 0 0 0 1 0 0 2 1 1 0 1 2 0 2 0 0 0 0 0 0 0 0 10 1 1248.6139 CON__P02769 CON__P02769 35 44 yes yes 2;3 1.5058E-06 218.94 2 7581000 7581000 + 77 3 77 82;83 88;89 89 2 FQEIETNLKK LQIGNNDDEVEIESKFQEIETNLKKLPKLE EIESKFQEIETNLKKLPKLETGFDALANKK K F Q K K L 0 0 1 0 0 1 2 0 0 1 1 2 0 1 0 0 1 0 0 0 0 0 10 1 1248.6714 Q12035 Q12035 52 61 FCF2 rRNA-processing protein FCF2 yes yes 3 0.0019136 125.71 1 0 0 78 55 78 84 90 90 9 0 FSEGTSADR CIIFMDEVDAIGGRRFSEGTSADREIQRTL AIGGRRFSEGTSADREIQRTLMELLTQMDG R F S D R E 1 1 0 1 0 0 1 1 0 0 0 0 0 1 0 2 1 0 0 0 0 0 9 0 968.41994 P53549 P53549 291 299 RPT4 26S protease subunit RPT4 yes yes 2 2.4916E-07 239.13 1 5841000 5841000 79 46 79 85 91 91 1 FSSSSGYGGGSSR YSRFSSSGGRGGGGRFSSSSGYGGGSSRVC GRFSSSSGYGGGSSRVCGRGGGGSFGYSYG R F S S R V 0 1 0 0 0 0 0 4 0 0 0 0 0 1 0 6 0 0 1 0 0 0 13 0 1234.5214 CON__P35527 CON__P35527 47 59 yes yes 2 1.089E-07 191.33 1 2746600 2746600 + 80 9 80 86 92 92 1 FTSTITK YYHLTKAVKLGDLKKFTSTITKYKQLLLKD VKLGDLKKFTSTITKYKQLLLKDDTYQLCV K F T T K Y 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 1 3 0 0 0 0 0 7 0 796.43307 P40016 P40016 360 366 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 0.0063926 162.31 1 5056400 5056400 81 38 81 87 93 93 1 GALMYGPPGTGK KRADKFKDMGIRAPKGALMYGPPGTGKTLL APKGALMYGPPGTGKTLLARACAAQTNATF K G A G K T 1 0 0 0 0 0 0 4 0 0 1 1 1 0 2 0 1 0 1 0 0 0 12 0 1147.5696 P33297 P33297 217 228 RPT5 26S protease regulatory subunit 6A yes yes 2 0.0038309 117.53 1 1770900 1770900 82 32 82 88 94 94 1 GDYSQATVLSR KIQFILEQMELSILKGDYSQATVLSRKILK SILKGDYSQATVLSRKILKKTFKNPKYESL K G D S R K 1 1 0 1 0 1 0 1 0 0 1 0 0 0 0 2 1 0 1 1 0 0 11 0 1195.5833 Q12250 Q12250 191 201 RPN5 26S proteasome regulatory subunit RPN5 yes yes 2 1.407E-06 192.5 1 1737700 1737700 83 57 83 89 95 95 1 GETYGVAVPSK GKKNVVITESGWPSKGETYGVAVPSKENQK WPSKGETYGVAVPSKENQKDAVSAITSSCG K G E S K E 1 0 0 0 0 0 1 2 0 0 0 1 0 0 1 1 1 0 1 2 0 0 11 0 1106.5608 P53334 P53334 330 340 SCW4 Probable family 17 glucosidase SCW4 yes yes 2 0.0025366 137.46 1 561740 561740 84 45 84 90 96 96 1 GFSSGSAVVSGGSR SCKSRGRGGGGGGFRGFSSGSAVVSGGSRR RGFSSGSAVVSGGSRRSTSSFSCLSRHGGG R G F S R R 1 1 0 0 0 0 0 4 0 0 0 0 0 1 0 5 0 0 0 2 0 0 14 0 1253.6 CON__P35908v2;CON__P35908;CON__Q3TTY5 CON__P35908v2 21 34 yes no 2 1.1396E-13 231.17 1 4392200 4392200 + 85 10 85 91 97 97 1 GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR SVSTSHTTISGGGSRGGGGGGYGSGGSSYG GGGSYGSGGGGGGGRGSYGSGGSSYGSGGG R G G G R G 0 1 0 0 0 0 0 21 0 0 0 0 0 0 0 6 0 0 3 0 0 0 31 0 2382.9446 CON__P04264 CON__P04264 519 549 yes yes 3 2.5293E-20 248.97 1 1217400 1217400 + 86 4 86 92 98;99 98 2 GGSGGGGSISGGGYGSGGGSGGR GSSSYGSGGRQSGSRGGSGGGGSISGGGYG ISGGGYGSGGGSGGRYGSGGGSKGGSISGG R G G G R Y 0 1 0 0 0 0 0 15 0 1 0 0 0 0 0 5 0 0 1 0 0 0 23 0 1740.7412 CON__P35908v2;CON__P35908 CON__P35908v2 550 572 yes no 2 2.1537E-17 239.19 1 1144500 1144500 + 87 10 87 93 100 100 1 GGSGGSYGGGGSGGGYGGGSGSR GGRGGSGGSYGRGSRGGSGGSYGGGGSGGG GGGSGGGYGGGSGSRGGSGGSYGGGSGSGG R G G S R G 0 1 0 0 0 0 0 15 0 0 0 0 0 0 0 5 0 0 2 0 0 0 23 0 1790.7204 CON__P35527 CON__P35527 491 513 yes yes 3 0.0019759 174.15 1 374730 374730 + 88 9 88 94 101 101 1 GGSISGGGYGSGGGK GGGSGGRYGSGGGSKGGSISGGGYGSGGGK GGSISGGGYGSGGGKHSSGGGSRGGSSSGG K G G G K H 0 0 0 0 0 0 0 9 0 1 0 1 0 0 0 3 0 0 1 0 0 0 15 0 1196.5422 CON__P35908v2;CON__P35908 CON__P35908v2 581 595 yes no 2 1.5535E-09 196.67 1 2361300 2361300 + 89 10 89 95 102 102 1 GISNEGQNASIK ILQTSNGGAAYFAGKGISNEGQNASIKGAI AGKGISNEGQNASIKGAIAAAHYIRSIAPA K G I I K G 1 0 2 0 0 1 1 2 0 2 0 1 0 0 0 2 0 0 0 0 0 0 12 0 1216.6048 P14540 P14540 74 85 FBA1 Fructose-bisphosphate aldolase yes yes 2 7.7519E-06 185.99 1 416400 416400 90 23 90 96 103 103 1 GLQSAIDVLDPLTK RCGTAFALGIACAGKGLQSAIDVLDPLTKD KGLQSAIDVLDPLTKDPVDFVRQAAMIALS K G L T K D 1 0 0 2 0 1 0 1 0 1 3 1 0 0 1 1 1 0 0 1 0 0 14 0 1468.8137 P32565 P32565 633 646 RPN2 26S proteasome regulatory subunit RPN2 yes yes 2 1.1726E-06 188.15 1 292230 292230 91 31 91 97 104 104 1 GMQDLVEDFK DSIVGERGRLDSELRGMQDLVEDFKNKYED DSELRGMQDLVEDFKNKYEDEINKRTAAEN R G M F K N 0 0 0 2 0 1 1 1 0 0 1 1 1 1 0 0 0 0 0 1 0 0 10 0 1180.5434 CON__P02538 CON__P02538 241 250 yes yes 2 0.005923 123.79 1 196910 196910 + 92 2 92 98 105 105 1 GPYESGSGHSSGLGHR SYGPYRSGSGWSSSRGPYESGSGHSSGLGH PYESGSGHSSGLGHRESRSGQSSGYGQHGS R G P H R E 0 1 0 0 0 0 1 5 2 0 1 0 0 0 1 4 0 0 1 0 0 0 16 0 1583.7077 CON__Q86YZ3 CON__Q86YZ3 1038 1053 yes no 2;3 2.6198E-06 166.24 2 2072100 2072100 + 93 11 93 99;100 106;107 107 2 GQHLADILNSASR EREAVSGILGKSEFKGQHLADILNSASRVP FKGQHLADILNSASRVPESNKKDDAENVEI K G Q S R V 2 1 1 1 0 1 0 1 1 1 2 0 0 0 0 2 0 0 0 0 0 0 13 0 1380.711 Q12118 Q12118 62 74 SGT2 Small glutamine-rich tetratricopeptide repeat-containing protein 2 yes yes 2;3 0.0008202 152.96 2 4698700 4698700 94 56 94 101;102 108;109 109 2 GSDQAIPK FLSLSFTPTTVIGIRGSDQAIPKFQMNCYA TTVIGIRGSDQAIPKFQMNCYAKEDAFSYP R G S P K F 1 0 0 1 0 1 0 1 0 1 0 1 0 0 1 1 0 0 0 0 0 0 8 0 814.41848 P32565 P32565 763 770 RPN2 26S proteasome regulatory subunit RPN2 yes yes 2 0.033442 103.74 1 420400 420400 95 31 95 103 110 110 1 GSGSGQSPSSGQHGTGFGR QHSSGSGQSPGHGQRGSGSGQSPSSGQHGT GQSPSSGQHGTGFGRSSSSGPYVSGSGYSS R G S G R S 0 1 0 0 0 2 0 7 1 0 0 0 0 1 1 5 1 0 0 0 0 0 19 0 1746.767 CON__Q86YZ3 CON__Q86YZ3 430 448 yes yes 3 0.010494 83.964 1 453380 453380 + 96 11 96 104 111 111 1 GSLGGGFSSGGFSGGSFSR GGGGGVSSLRISSSKGSLGGGFSSGGFSGG GGFSSGGFSGGSFSRGSSGGGCFGGSSGGY K G S S R G 0 1 0 0 0 0 0 8 0 0 1 0 0 3 0 6 0 0 0 0 0 0 19 0 1706.7649 CON__P13645 CON__P13645 41 59 yes yes 3 0.0057686 103.39 1 660700 660700 + 97 6 97 105 112 112 1 GTMTMDVFNDAHVLNK LFITRLAQGLLHLGKGTMTMDVFNDAHVLN TMTMDVFNDAHVLNKVTLASILTTAVGLVS K G T N K V 1 0 2 2 0 0 0 1 1 0 1 1 2 1 0 0 2 0 0 2 0 0 16 0 1791.8284 P38764 P38764 860 875 RPN1 26S proteasome regulatory subunit RPN1 yes yes 3 0.03473 49.333 1 108610 108610 98 36 98 106 113 113 0 GVCTEAGMYALR KVAEKMNGCSGADVKGVCTEAGMYALRERR DVKGVCTEAGMYALRERRIHVTQEDFELAV K G V L R E 2 1 0 0 1 0 1 2 0 0 1 0 1 0 0 0 1 0 1 1 0 0 12 0 1269.5846 Q01939 Q01939 360 371 RPT6 26S protease regulatory subunit 8 homolog yes yes 2 3.5478E-05 183.67 1 277060 277060 99 47 99 107 114 114 1 GVIFYENK ILRLQSTAAIPKTQKGVIFYENKGKLHYKD AIPKTQKGVIFYENKGKLHYKDIPVPEPKP K G V N K G 0 0 1 0 0 0 1 1 0 1 0 1 0 1 0 0 0 0 1 1 0 0 8 0 968.49673 P07246 P07246 36 43 ADH3 Alcohol dehydrogenase 3, mitochondrial yes yes 2 0.0032833 162.31 1 1413000 1413000 100 16 100 108 115 115 1 GVILYGAPGTGK THPELYEEMGIKPPKGVILYGAPGTGKTLL PPKGVILYGAPGTGKTLLAKAVANQTSATF K G V G K T 1 0 0 0 0 0 0 4 0 1 1 1 0 0 1 0 1 0 1 1 0 0 12 0 1131.6288 P40327 P40327 218 229 RPT2 26S protease regulatory subunit 4 homolog yes yes 2 4.2194E-05 159.79 1 4552200 4552200 101 39 101 109 116 116 1 GVLLYGPPGTGK KNPEIFQRVGIKPPKGVLLYGPPGTGKTLL PPKGVLLYGPPGTGKTLLAKAVAATIGANF K G V G K T 0 0 0 0 0 0 0 4 0 0 2 1 0 0 2 0 1 0 1 1 0 0 12 0 1157.6445 P53549;P33298 P53549 217 228 RPT4;RPT3 26S protease subunit RPT4;26S protease regulatory subunit 6B homolog no no 2 2.5366E-05 172.59 6 457510000 457510000 102 46;33 102 110;111;112;113;114;115 117;118;119;120;121;122;123;124 118 8 GVVDSEDLPLNLSR DEAEDLIPEWLSFVKGVVDSEDLPLNLSRE KGVVDSEDLPLNLSREMLQQNKIMKVIRKN K G V S R E 0 1 1 2 0 0 1 1 0 0 3 0 0 0 1 2 0 0 0 2 0 0 14 0 1512.7784 P15108;P02829 P15108 363 376 HSC82;HSP82 ATP-dependent molecular chaperone HSC82;ATP-dependent molecular chaperone HSP82 yes no 2 0.001436 151.55 1 396040 396040 103 13 103 116 125 125 1 HEDFVEGISEVQAR EAGMIALRNGQSSVKHEDFVEGISEVQARK KHEDFVEGISEVQARKSKSVSFYA______ K H E A R K 1 1 0 1 0 1 3 1 1 1 0 0 0 1 0 1 0 0 0 2 0 0 14 0 1614.7638 P33297 P33297 412 425 RPT5 26S protease regulatory subunit 6A yes yes 2;3 5.7561E-19 270.67 2 5120400 5120400 104 32 104 117;118 126;127 127 2 HGGGGGGFGGGGFGSR GGSRRSTSSFSCLSRHGGGGGGFGGGGFGS GGGGGGFGGGGFGSRSLVGLGGTKSISISV R H G S R S 0 1 0 0 0 0 0 11 1 0 0 0 0 2 0 1 0 0 0 0 0 0 16 0 1319.5755 CON__P35908v2;CON__P35908 CON__P35908v2 46 61 yes no 2;3 1.9791E-06 187.58 2 2387200 2387200 + 105 10 105 119;120 128;129 129 2 HGSGLGHSSSHGQHGSGSGR GRQGSGSGHSPSRGRHGSGLGHSSSHGQHG GHSSSHGQHGSGSGRSSSRGPYESRSGHSS R H G G R S 0 1 0 0 0 1 0 7 4 0 1 0 0 0 0 6 0 0 0 0 0 0 20 0 1884.8324 CON__Q86YZ3 CON__Q86YZ3 1248 1267 yes no 2 0.0013232 122.78 1 33721 33721 + 106 11 106 121 130 130 1 HGSSSGSSSHYGQHGSGSR GQHGSRSGQSSRGERHGSSSGSSSHYGQHG SGSSSHYGQHGSGSRQSSGHGRQGSGSGHS R H G S R Q 0 1 0 0 0 1 0 5 3 0 0 0 0 0 0 8 0 0 1 0 0 0 19 0 1857.7739 CON__Q86YZ3 CON__Q86YZ3 1209 1227 yes no 3 0.0068699 96.143 1 61869 61869 + 107 11 107 122 131 131 1 HHWEDLQK VLNEDDLAFGGEANKHHWEDLQKRVIEHNL FGGEANKHHWEDLQKRVIEHNLRVISEYYS K H H Q K R 0 0 0 1 0 1 1 0 2 0 1 1 0 0 0 0 0 1 0 0 0 0 8 0 1091.5148 Q12250 Q12250 336 343 RPN5 26S proteasome regulatory subunit RPN5 yes yes 2;3 0.0066923 130.27 2 833520 833520 108 57 108 123;124 132;133 132 2 HLVDEPQNLIK DDPHACYSTVFDKLKHLVDEPQNLIKQNCD DKLKHLVDEPQNLIKQNCDQFEKLGEYGFQ K H L I K Q 0 0 1 1 0 1 1 0 1 1 2 1 0 0 1 0 0 0 0 1 0 0 11 0 1304.7089 CON__P02769 CON__P02769 402 412 yes yes 2 9.8801E-10 232.83 1 16621000 16621000 + 109 3 109 125 134 134 1 HPELFESLGIAQPK KQIKEIKEVIELPVKHPELFESLGIAQPKG KHPELFESLGIAQPKGVILYGPPGTGKTLL K H P P K G 1 0 0 0 0 1 2 1 1 1 2 1 0 1 2 1 0 0 0 0 0 0 14 0 1564.8249 Q01939 Q01939 170 183 RPT6 26S protease regulatory subunit 8 homolog yes yes 2;3 1.0454E-13 252.97 13 244990000 244990000 110 47 110 126;127;128;129;130;131;132;133;134;135;136;137;138 135;136;137;138;139;140;141;142;143;144;145;146;147;148;149;150;151 138 16 HSGIGHGQASSAVR RHGSHHQLQSADSSRHSGIGHGQASSAVRD RHSGIGHGQASSAVRDSGHRGYSGSQASDS R H S V R D 2 1 0 0 0 1 0 3 2 1 0 0 0 0 0 3 0 0 0 1 0 0 14 0 1362.6753 CON__P20930 CON__P20930 2019 2032 yes no 3 0.017377 80.469 1 98483 98483 + 111 8 111 139 152 152 1 IDVMLTIAR TLGKSLSKAISTGAKIDVMLTIARLGFFYN ISTGAKIDVMLTIARLGFFYNDQLYVKEKL K I D A R L 1 1 0 1 0 0 0 0 0 2 1 0 1 0 0 0 1 0 0 1 0 0 9 0 1030.5845 Q06103 Q06103 168 176 RPN7 26S proteasome regulatory subunit RPN7 yes yes 2 0.00019326 190.73 1 845990 845990 112 50 112 140 153 153 1 IEFPPPSVAAR ILDPALLRPGRIDRKIEFPPPSVAARAEIL IDRKIEFPPPSVAARAEILRIHSRKMNLTR K I E A R A 2 1 0 0 0 0 1 0 0 1 0 0 0 1 3 1 0 0 0 1 0 0 11 0 1182.6397 Q01939 Q01939 314 324 RPT6 26S protease regulatory subunit 8 homolog yes yes 2 0.0042389 125.57 2 197390000 197390000 113 47 113 141;142 154;155;156 155 3 IHVTQEDFELAVGK GVCTEAGMYALRERRIHVTQEDFELAVGKV RIHVTQEDFELAVGKVMNKNQETAISVAKL R I H G K V 1 0 0 1 0 1 2 1 1 1 1 1 0 1 0 0 1 0 0 2 0 0 14 0 1584.8148 Q01939 Q01939 375 388 RPT6 26S protease regulatory subunit 8 homolog yes yes 2;3 1.2079E-14 255.54 5 178810000 178810000 114 47 114 143;144;145;146;147 157;158;159;160;161;162;163 157 7 IIGLDTQQVEGK IIEPFECVEISHISKIIGLDTQQVEGKLSQ ISKIIGLDTQQVEGKLSQMILDKIFYGVLD K I I G K L 0 0 0 1 0 2 1 2 0 2 1 1 0 0 0 0 1 0 0 1 0 0 12 0 1299.7034 Q12377 Q12377 365 376 RPN6 26S proteasome regulatory subunit RPN6 yes yes 2 1.693E-07 214.82 1 2215700 2215700 115 58 115 148 164 164 1 IIMATNR LLNQLDGFETSKNIKIIMATNRLDILDPAL FETSKNIKIIMATNRLDILDPALLRPGRID K I I N R L 1 1 1 0 0 0 0 0 0 2 0 0 1 0 0 0 1 0 0 0 0 0 7 0 817.44801 Q01939;P53549 Q01939 290 296 RPT6;RPT4 26S protease regulatory subunit 8 homolog;26S protease subunit RPT4 no no 2 0.0089024 149.4 1 71520000 71520000 116 47;46 116 149 165 165 1 IISLTYK LCVRLRSNVIKTGIRIISLTYKKISLRDIC NVIKTGIRIISLTYKKISLRDICLKLNLDS R I I Y K K 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 1 1 0 1 0 0 0 7 0 836.50076 P40016 P40016 394 400 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 0.011778 138.37 1 5932500 5932500 117 38 117 150 166 166 1 IKEEEMAPYYK SIEQRKEAAEFVLAKIKEEEMAPYYKYLCE VLAKIKEEEMAPYYKYLCEEYLVNNGQSDL K I K Y K Y 1 0 0 0 0 0 3 0 0 1 0 2 1 0 1 0 0 0 2 0 0 0 11 1 1399.6694 Q06103 Q06103 54 64 RPN7 26S proteasome regulatory subunit RPN7 yes yes 2;3 1.4499E-09 242.49 2 12320000 12320000 118 50 118 151;152 167;168 168 2 IKELNEK DQELYNELCKKNESKIKELNEKIQKLEEDD LCKKNESKIKELNEKIQKLEEDDEGELEQA K I K E K I 0 0 1 0 0 0 2 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 7 1 872.49673 Q06103 Q06103 110 116 RPN7 26S proteasome regulatory subunit RPN7 yes yes 2 0.0082346 166.68 1 10331000 10331000 119 50 119 153 169 169 1 ILNEMRDQYEK VNVEMDAAPGVDLSRILNEMRDQYEKMAEK DLSRILNEMRDQYEKMAEKNRKDAEEWFFT R I L E K M 0 1 1 1 0 1 2 0 0 1 1 1 1 0 0 0 0 0 1 0 0 0 11 1 1437.6922 CON__P02533;CON__Q04695;CON__Q6IFX2 CON__P02533 283 293 yes no 2 0.0073815 119.34 1 526780 526780 + 120 1 120 154 170 170 1 ILSNLVYQYK ELREKERISVAAASKILSNLVYQYKGAGLS AAASKILSNLVYQYKGAGLSMGTMICGYTR K I L Y K G 0 0 1 0 0 1 0 0 0 1 2 1 0 0 0 1 0 0 2 1 0 0 10 0 1239.6863 P30656 P30656 157 166 PRE2 Proteasome subunit beta type-5 yes yes 2 0.0018579 145.46 1 737480 737480 121 30 121 155 171 171 1 ILSTLDR TGIVSSTTGMSYVVRILSTLDRELLKPSMS TGMSYVVRILSTLDRELLKPSMSVALHRHS R I L D R E 0 1 0 1 0 0 0 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 7 0 816.47052 P33298 P33298 122 128 RPT3 26S protease regulatory subunit 6B homolog yes yes 2 0.013759 130.77 1 3719700 3719700 122 33 122 156 172 172 1 INEMTQKVEGSRSAK LTKDLKEEIDRFDEKINEMTQKVEGSRSAK INEMTQKVEGSRSAKTQNEAIKAVENYIKD K I N A K T 1 1 1 0 0 1 2 1 0 1 0 2 1 0 0 2 1 0 0 1 0 0 15 2 1676.8516 P53107 P53107 100 114 YRB30 Ran-specific GTPase-activating protein 30 yes yes 2 0.0016549 131.42 1 0 0 123 44 123 157 173 173 0;1 0 INISNNLQK GTPDDDEIDVENHDRINISNNLQKALTVKT VENHDRINISNNLQKALTVKTNDELMVIYI R I N Q K A 0 0 3 0 0 1 0 0 0 2 1 1 0 0 0 1 0 0 0 0 0 0 9 0 1042.5771 Q08723 Q08723 255 263 RPN8 26S proteasome regulatory subunit RPN8 yes yes 2 0.00015165 193.1 1 16524000 16524000 124 53 124 158 174 174 1 INQLSVVK RLRLYDNFVSKFYDKINQLSVVKYLLASLK VSKFYDKINQLSVVKYLLASLKDSKDFDES K I N V K Y 0 0 1 0 0 1 0 0 0 1 1 1 0 0 0 1 0 0 0 2 0 0 8 0 899.54402 Q04062 Q04062 73 80 RPN9 26S proteasome regulatory subunit RPN9 yes yes 2 8.0155E-07 231.3 1 2850700 2850700 125 49 125 159 175 175 1 IPILAQHESFLR DFDKFDSLIKVQISKIPILAQHESFLRQKI ISKIPILAQHESFLRQKICLMTLIETVFVK K I P L R Q 1 1 0 0 0 1 1 0 1 2 2 0 0 1 1 1 0 0 0 0 0 0 12 0 1422.7983 Q04062 Q04062 277 288 RPN9 26S proteasome regulatory subunit RPN9 yes yes 3 0.0046261 110.93 1 1376900 1376900 126 49 126 160 176 176 1 IQQDTLIQTK LLQFSDVQAKIAQARIQQDTLIQTKFNKNL IAQARIQQDTLIQTKFNKNLRERLSFEIGK R I Q T K F 0 0 0 1 0 3 0 0 0 2 1 1 0 0 0 0 2 0 0 0 0 0 10 0 1186.6558 P40531 P40531 179 188 GVP36 Protein GVP36 yes yes 2 7.5283E-05 176.6 1 1295400 1295400 127 40 127 161 177 177 1 IRLENEIQTYR TECQNTEYQQLLDIKIRLENEIQTYRSLLE LDIKIRLENEIQTYRSLLEGEGSSGGGGRG K I R Y R S 0 2 1 0 0 1 2 0 0 2 1 0 0 0 0 0 1 0 1 0 0 0 11 1 1433.7627 CON__P13645 CON__P13645 440 450 yes yes 2 0.00010895 166.86 1 910740 910740 + 128 6 128 162 178 178 1 ISISTSGGSFR GYGSRSLYNLGGSKRISISTSGGSFRNRFG GSKRISISTSGGSFRNRFGAGAGGGYGFGG R I S F R N 0 1 0 0 0 0 0 2 0 2 0 0 0 1 0 4 1 0 0 0 0 0 11 0 1110.5669 CON__P13647 CON__P13647 74 84 yes yes 2 9.48E-05 160.53 1 3076600 3076600 + 129 7 129 163 179 179 1 ISVIETIR MEYLKSSKSLDLNTRISVIETIRVVTENKI SLDLNTRISVIETIRVVTENKIFVEVERAR R I S I R V 0 1 0 0 0 0 1 0 0 3 0 0 0 0 0 1 1 0 0 1 0 0 8 0 929.55458 Q12250 Q12250 116 123 RPN5 26S proteasome regulatory subunit RPN5 yes yes 2 0.028212 107.29 1 788600 788600 130 57 130 164 180 180 1 ITGWITQSTPVLLNHGER GQAVETVGQAGRPKKITGWITQSTPVLLNH WITQSTPVLLNHGERAELETDEYISYTSHI K I T E R A 0 1 1 0 0 1 1 2 1 2 2 0 0 0 1 1 3 1 0 1 0 0 18 0 2021.0694 P38764 P38764 945 962 RPN1 26S proteasome regulatory subunit RPN1 yes yes 3 0.01285 79.92 1 542440 542440 131 36 131 165 181 181 1 IVGLSELPK ALDFFSRGLIKSPIKIVGLSELPKVYDLME IKSPIKIVGLSELPKVYDLMEKGKILGRYV K I V P K V 0 0 0 0 0 0 1 1 0 1 2 1 0 0 1 1 0 0 0 1 0 0 9 0 954.57498 P07246 P07246 347 355 ADH3 Alcohol dehydrogenase 3, mitochondrial yes yes 2 0.021558 110.12 1 1819300 1819300 132 16 132 166 182 182 1 IVGSELIQK LAKAVANQTSATFLRIVGSELIQKYLGDGP SATFLRIVGSELIQKYLGDGPRLCRQIFKV R I V Q K Y 0 0 0 0 0 1 1 1 0 2 1 1 0 0 0 1 0 0 0 1 0 0 9 0 985.5808 P40327 P40327 247 255 RPT2 26S protease regulatory subunit 4 homolog yes yes 2 0.00012651 199.02 1 5583300 5583300 133 39 133 167 183 183 1 IVPLTEGDIQVLK KAPLEDDDKKPDDDKIVPLTEGDIQVLKSY DKIVPLTEGDIQVLKSYGAAPYAAKLKQTE K I V L K S 0 0 0 1 0 1 1 1 0 2 2 1 0 0 1 0 1 0 0 2 0 0 13 0 1423.8286 P33299 P33299 26 38 RPT1 26S protease regulatory subunit 7 homolog yes yes 2 0.035045 93.442 1 424860 424860 134 34 134 168 184 184 1 IVQLLSK ALGFVLLRDYTTVPRIVQLLSKSHNAHVRC RDYTTVPRIVQLLSKSHNAHVRCGTAFALG R I V S K S 0 0 0 0 0 1 0 0 0 1 2 1 0 0 0 1 0 0 0 1 0 0 7 0 799.51674 P32565;P47169 P32565 605 611 RPN2;MET5 26S proteasome regulatory subunit RPN2;Sulfite reductase [NADPH] subunit beta yes no 2 0.034572 104.21 1 1937000 1937000 135 31 135 169 185 185 0 KDDAENVEINIPEDDAETK ADILNSASRVPESNKKDDAENVEINIPEDD ENVEINIPEDDAETKAKAEDLKMQGNKAMA K K D T K A 2 0 2 4 0 0 4 0 0 2 0 2 0 0 1 0 1 0 0 1 0 0 19 1 2143.9757 Q12118 Q12118 81 99 SGT2 Small glutamine-rich tetratricopeptide repeat-containing protein 2 yes yes 3 0.00015485 142.55 1 974530 974530 136 56 136 170 186 186 1 KEAAEFVLAK KAFLLTQSKVSIEQRKEAAEFVLAKIKEEE SIEQRKEAAEFVLAKIKEEEMAPYYKYLCE R K E A K I 3 0 0 0 0 0 2 0 0 0 1 2 0 1 0 0 0 0 0 1 0 0 10 1 1104.6179 Q06103 Q06103 44 53 RPN7 26S proteasome regulatory subunit RPN7 yes yes 2;3 4.077E-05 164.66 2 21858000 21858000 137 50 137 171;172 187;188 187 2 KEEEEQLSEEDAK QISPEKQTPNKKDKKKEEEEQLSEEDAKLK KKKEEEEQLSEEDAKLKTDLELLVERLKED K K E A K L 1 0 0 1 0 1 6 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 13 1 1562.6948 P38764 P38764 32 44 RPN1 26S proteasome regulatory subunit RPN1 yes yes 2;3 1.9968E-19 336.16 2 897810 897810 138 36 138 173;174 189;190 190 2 KELLLIPPGFPTK PDELGNSGKVYKCNRKELLLIPPGFPTKNY NRKELLLIPPGFPTKNYPPGTKVLARYPET R K E T K N 0 0 0 0 0 0 1 1 0 1 3 2 0 1 3 0 1 0 0 0 0 0 13 1 1451.8752 P25554 P25554 181 193 SGF29 SAGA-associated factor 29 yes yes 2 0.023493 70.54 1 0 0 139 27 139 175 191 191 3 0 KGYSPTHREEEYGK TGGKRHESSSEKKERKGYSPTHREEEYGKN RKGYSPTHREEEYGKNHHNSSKKEKNKTEN R K G G K N 0 1 0 0 0 0 3 2 1 0 0 2 0 0 1 1 1 0 2 0 0 0 14 2 1679.7903 CON__P20930 CON__P20930 162 175 yes yes 3 0.031774 56.087 1 206050 206050 + 140 8 140 176 192 192 1 KIEFPLPSEDSR DVLDPALLRSGRLDRKIEFPLPSEDSRAQI LDRKIEFPLPSEDSRAQILQIHSRKMTTDD R K I S R A 0 1 0 1 0 0 2 0 0 1 1 1 0 1 2 2 0 0 0 0 0 0 12 1 1416.7249 P33297 P33297 346 357 RPT5 26S protease regulatory subunit 6A yes yes 2;3 1.0879E-10 231.07 2 2386300 2386300 141 32 141 177;178 193;194 194 2 KIEFPPPSVAAR DILDPALLRPGRIDRKIEFPPPSVAARAEI IDRKIEFPPPSVAARAEILRIHSRKMNLTR R K I A R A 2 1 0 0 0 0 1 0 0 1 0 1 0 1 3 1 0 0 0 1 0 0 12 1 1310.7347 Q01939 Q01939 313 324 RPT6 26S protease regulatory subunit 8 homolog yes yes 2;3 4.5963E-05 160.86 16 401580000 401580000 142 47 142 179;180;181;182;183;184;185;186;187;188;189;190;191;192;193;194 195;196;197;198;199;200;201;202;203;204;205;206;207;208;209;210;211;212;213;214 195 20 KIEFPSLR DTLDPALLRPGRLDRKIEFPSLRDRRERRL RPGRLDRKIEFPSLRDRRERRLIFGTIASK R K I L R D 0 1 0 0 0 0 1 0 0 1 1 1 0 1 1 1 0 0 0 0 0 0 8 1 988.57057 P33298 P33298 337 344 RPT3 26S protease regulatory subunit 6B homolog yes yes 2 0.019227 87.639 1 607680 607680 143 33 143 195 215 215 1 KIIFDWDAPRTK LREMKLLAQEVTPLKKIIFDWDAPRTKEGY PLKKIIFDWDAPRTKEGYYMFNGCIEAAIR K K I T K E 1 1 0 2 0 0 0 0 0 2 0 2 0 1 1 0 1 1 0 0 0 0 12 2 1488.8089 Q12031 Q12031 390 401 ICL2 Mitochondrial 2-methylisocitrate lyase yes yes 2 0.029361 77.192 1 0 0 144 54 144 196 216 216 8 0 KKEEEEQLSEEDAK SQISPEKQTPNKKDKKKEEEEQLSEEDAKL KKKEEEEQLSEEDAKLKTDLELLVERLKED K K K A K L 1 0 0 1 0 1 6 0 0 0 1 3 0 0 0 1 0 0 0 0 0 0 14 2 1690.7897 P38764 P38764 31 44 RPN1 26S proteasome regulatory subunit RPN1 yes yes 2;3 1.1118E-44 407.76 2 3124100 3124100 145 36 145 197;198 217;218 218 2 KKVEQSLNLEK DNATEAMKRDYESAKKKVEQSLNLEKTVPE ESAKKKVEQSLNLEKTVPEQSRDADVDASQ K K K E K T 0 0 1 0 0 1 2 0 0 0 2 3 0 0 0 1 0 0 0 1 0 0 11 2 1314.7507 Q12118 Q12118 217 227 SGT2 Small glutamine-rich tetratricopeptide repeat-containing protein 2 yes yes 2;3 3.8722E-10 229.82 2 1377500 1377500 146 56 146 199;200 219;220 220 2 KLEGTIEYQK PDDLMKAVRKVAEVKKLEGTIEYQKL____ VAEVKKLEGTIEYQKL______________ K K L Q K L 0 0 0 0 0 1 2 1 0 1 1 2 0 0 0 0 1 0 1 0 0 0 10 1 1207.6449 P53549 P53549 427 436 RPT4 26S protease subunit RPT4 yes yes 2 3.4062E-10 246.59 1 9195600 9195600 147 46 147 201 221 221 1 KLESQESLVK QNDLIHKIQNDNNLKKLESQESLVKLFTTN DNNLKKLESQESLVKLFTTNELMRWPIVQK K K L V K L 0 0 0 0 0 1 2 0 0 0 2 2 0 0 0 2 0 0 0 1 0 0 10 1 1159.6449 Q12250 Q12250 292 301 RPN5 26S proteasome regulatory subunit RPN5 yes yes 2 5.4826E-07 204.79 1 803350 803350 148 57 148 202 222 222 1 KNPDYREEE YISYTSHIEGVVILKKNPDYREEE______ GVVILKKNPDYREEE_______________ K K N E E - 0 1 1 1 0 0 3 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 9 2 1178.5204 P38764 P38764 985 993 RPN1 26S proteasome regulatory subunit RPN1 yes yes 2;3 0.019263 75.043 2 1255400 1255400 149 36 149 203;204 223;224 223 2 KQLEEIR SEILKPFEKKQEEEKKQLEEIRGNPLSIGT EKKQEEEKKQLEEIRGNPLSIGTLEEIIDD K K Q I R G 0 1 0 0 0 1 2 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 7 1 914.51853 P40327 P40327 94 100 RPT2 26S protease regulatory subunit 4 homolog yes yes 2 0.0047258 129.68 1 987350 987350 150 39 150 205 225 225 1 KQTALVELLK HADICTLPDTEKQIKKQTALVELLKHKPKA EKQIKKQTALVELLKHKPKATEEQLKTVME K K Q L K H 1 0 0 0 0 1 1 0 0 0 3 2 0 0 0 0 1 0 0 1 0 0 10 1 1141.7071 CON__P02769 CON__P02769 548 557 yes yes 2;3 0.0010139 139.38 2 4876400 4876400 + 151 3 151 206;207 226;227 226 2 KTGEFDFEAAVK AGRLEIFKIHTAKVKKTGEFDFEAAVKMSD KVKKTGEFDFEAAVKMSDGFNGADIRNCAT K K T V K M 2 0 0 1 0 0 2 1 0 0 0 2 0 2 0 0 1 0 0 1 0 0 12 1 1340.6612 P53549 P53549 370 381 RPT4 26S protease subunit RPT4 yes yes 3 0.00055184 136.27 1 1642500 1642500 152 46 152 208 228 228 1 KTSVSTNVKER HRFMDIALQMGTQLRKTSVSTNVKERLDFS TQLRKTSVSTNVKERLDFSCALFDSKGNLV R K T E R L 0 1 1 0 0 0 1 0 0 0 0 2 0 0 0 2 2 0 0 2 0 0 11 2 1247.6834 P28273 P28273 771 781 OXP1 5-oxoprolinase yes yes 2 0.026089 84.821 1 0 0 153 29 153 209 229 229 4 0 KVEFSLPDLEGR NTLDPALLRPGRIDRKVEFSLPDLEGRANI IDRKVEFSLPDLEGRANIFRIHSKSMSVER R K V G R A 0 1 0 1 0 0 2 1 0 0 2 1 0 1 1 1 0 0 0 1 0 0 12 1 1388.73 P33299 P33299 374 385 RPT1 26S protease regulatory subunit 7 homolog yes yes 2 0.00016481 150.09 1 256900 256900 154 34 154 210 230 230 1 KVEIPLPNEAGR DTLDPALLRPGRLDRKVEIPLPNEAGRLEI LDRKVEIPLPNEAGRLEIFKIHTAKVKKTG R K V G R L 1 1 1 0 0 0 2 1 0 1 1 1 0 0 2 0 0 0 0 1 0 0 12 1 1321.7354 P53549 P53549 346 357 RPT4 26S protease subunit RPT4 yes yes 2 0.0031079 129 1 2628400 2628400 155 46 155 211 231 231 1 KVEQSLNLEK NATEAMKRDYESAKKKVEQSLNLEKTVPEQ ESAKKKVEQSLNLEKTVPEQSRDADVDASQ K K V E K T 0 0 1 0 0 1 2 0 0 0 2 2 0 0 0 1 0 0 0 1 0 0 10 1 1186.6558 Q12118 Q12118 218 227 SGT2 Small glutamine-rich tetratricopeptide repeat-containing protein 2 yes yes 2;3 3.9138E-07 211.64 2 3317400 3317400 156 56 156 212;213 232;233 232 2 KVPQVSTPTLVEVSR GEYGFQNALIVRYTRKVPQVSTPTLVEVSR KVPQVSTPTLVEVSRSLGKVGTRCCTKPES R K V S R S 0 1 0 0 0 1 1 0 0 0 1 1 0 0 2 2 2 0 0 4 0 0 15 1 1638.9305 CON__P02769;CON__P02768-1 CON__P02769 437 451 yes no 3 0.00064541 186.29 1 11996000 11996000 + 157 3 157 214 234 234 1 KVYAQLLESYK YLNRHADFFVREMRRKVYAQLLESYKTLSL EMRRKVYAQLLESYKTLSLKSMASAFGVSV R K V Y K T 1 0 0 0 0 1 1 0 0 0 2 2 0 0 0 1 0 0 2 1 0 0 11 1 1340.734 Q06103 Q06103 336 346 RPN7 26S proteasome regulatory subunit RPN7 yes yes 2;3 1.1871E-10 256.24 2 16853000 16853000 158 50 158 215;216 235;236 235 2 KYAEEDQVQELLK DVDSSGVNDLHHSEKKYAEEDQVQELLKVL EKKYAEEDQVQELLKVLNEISKTTLTLDPR K K Y L K V 1 0 0 1 0 2 3 0 0 0 2 2 0 0 0 0 0 0 1 1 0 0 13 1 1591.8094 P40016 P40016 24 36 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2;3 3.0385E-14 248.19 2 5312200 5312200 159 38 159 217;218 237;238 238 2 KYEDEINKR SELNNMQDLVEDYKKKYEDEINKRTAAEND VEDYKKKYEDEINKRTAAENDFVTLKKDVD K K Y K R T 0 1 1 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 9 2 1193.6041 CON__P35908v2;CON__P35908;CON__Q3TTY5;CON__P12035;CON__Q01546 CON__P35908v2 267 275 no no 2;3 0.019263 116.37 2 1013800 1013800 + 160 10 160 219;220 239;240 240 2 KYTQNNPLLLIVDVK PKLRASDLKINELFKKYTQNNPLLLIVDVK KYTQNNPLLLIVDVKQQGVGLPTDAYVAIE K K Y V K Q 0 0 2 1 0 1 0 0 0 1 3 2 0 0 1 0 1 0 1 2 0 0 15 1 1757.0087 Q08723 Q08723 112 126 RPN8 26S proteasome regulatory subunit RPN8 yes yes 3 0.0079215 95.822 1 365220 365220 161 53 161 221 241 241 1 LAADDFR TTDNANILLQIDNARLAADDFRLKYENEVA LLQIDNARLAADDFRLKYENEVALRQSVEA R L A F R L 2 1 0 2 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 7 0 806.39227 CON__P08779;CON__P19012;CON__A2A4G1;CON__Q9Z2K1;CON__Q3ZAW8;CON__P08727;CON__P19001;CON__Q14525;CON__Q9UE12;CON__Q15323;CON__A2A5Y0;CON__P05784;CON__Q92764;CON__Q14532;CON__A2AB72;CON__Q497I4;CON__O76015;CON__O76013;CON__O76014;CON__REFSEQ:XP_986630;CON__P02533;CON__Q04695;CON__Q9QWL7;CON__Q6IFX2;CON__P13645;CON__P02535-1;CON__Q148H6;CON__Q7Z3Y7;CON__Q2M2I5 CON__P13645 229 235 no no 2 0.015433 124.34 1 6216200 6216200 + 162 6;5;1 162 222 242 242 1 LAAPQLVQMYIGEGAK LARACAAQTNATFLKLAAPQLVQMYIGEGA AAPQLVQMYIGEGAKLVRDAFALAKEKAPT K L A A K L 3 0 0 0 0 2 1 2 0 1 2 1 1 0 1 0 0 0 1 1 0 0 16 0 1687.8967 P33297 P33297 246 261 RPT5 26S protease regulatory subunit 6A yes yes 2;3 1.7659E-10 196.5 2 594060 594060 163 32 163 223;224 243;244;245 243 3 LAELEEALQK AEQRGELALKDARNKLAELEEALQKAKQDM DARNKLAELEEALQKAKQDMARLLREYQEL K L A Q K A 2 0 0 0 0 1 3 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1142.6183 CON__P13647 CON__P13647 432 441 yes yes 2 1.6067E-06 205.12 1 632300 632300 + 164 7 164 225 246 246 1 LAQGLLHLGK ASYYSREQDALFITRLAQGLLHLGKGTMTM LFITRLAQGLLHLGKGTMTMDVFNDAHVLN R L A G K G 1 0 0 0 0 1 0 2 1 0 4 1 0 0 0 0 0 0 0 0 0 0 10 0 1048.6393 P38764 P38764 850 859 RPN1 26S proteasome regulatory subunit RPN1 yes yes 2;3 0.001252 153.04 2 3350800 3350800 165 36 165 226;227 247;248 248 2 LASYLDKVR LSGNEKVTMQNLNDRLASYLDKVRALEESN QNLNDRLASYLDKVRALEESNYELEGKIKE R L A V R A 1 1 0 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 1 1 0 0 9 1 1063.6026 CON__P08779;CON__P19012;CON__A2A4G1;CON__P08727;CON__P19001;CON__Q99456;CON__P02533;CON__Q04695;CON__Q9QWL7;CON__P13645 CON__P13645 157 165 no no 2 0.014271 93.649 1 2224300 2224300 + 166 6;5;1 166 228 249 249 1 LATLHYQK KREKRVFLKHSLSIKLATLHYQKKQYKDSL KHSLSIKLATLHYQKKQYKDSLALINDLLR K L A Q K K 1 0 0 0 0 1 0 0 1 0 2 1 0 0 0 0 1 0 1 0 0 0 8 0 972.53927 Q12377 Q12377 141 148 RPN6 26S proteasome regulatory subunit RPN6 yes yes 2 0.010406 129.68 1 784800 784800 167 58 167 229 250 250 1 LDILDPALLR FETSKNIKIIMATNRLDILDPALLRPGRID MATNRLDILDPALLRPGRIDRKIEFPPPSV R L D L R P 1 1 0 2 0 0 0 0 0 1 4 0 0 0 1 0 0 0 0 0 0 0 10 0 1137.6758 Q01939 Q01939 297 306 RPT6 26S protease regulatory subunit 8 homolog yes yes 2 0.0038643 134.77 1 22024000 22024000 168 47 168 230 251 251 1 LDQDSTSENVK EGYRLDIIESALKSKLDQDSTSENVKIINY LKSKLDQDSTSENVKIINYLLTLAITTVTN K L D V K I 0 0 1 2 0 1 1 0 0 0 1 1 0 0 0 2 1 0 0 1 0 0 11 0 1234.5677 P32565 P32565 174 184 RPN2 26S proteasome regulatory subunit RPN2 yes yes 2 0.00036349 152.64 1 163690 163690 169 31 169 231 252 252 1 LEAVNSMIEK RLGFFYNDQLYVKEKLEAVNSMIEKGGDWE YVKEKLEAVNSMIEKGGDWERRNRYKTYYG K L E E K G 1 0 1 0 0 0 2 0 0 1 1 1 1 0 0 1 0 0 0 1 0 0 10 0 1132.5798 Q06103 Q06103 191 200 RPN7 26S proteasome regulatory subunit RPN7 yes yes 2 1.9065E-06 200.71 1 4550500 4550500 170 50 170 232 253 253 1 LEGTIEYQK DDLMKAVRKVAEVKKLEGTIEYQKL_____ VAEVKKLEGTIEYQKL______________ K L E Q K L 0 0 0 0 0 1 2 1 0 1 1 1 0 0 0 0 1 0 1 0 0 0 9 0 1079.5499 P53549 P53549 428 436 RPT4 26S protease subunit RPT4 yes yes 2 0.0065666 132.76 1 687380 687380 171 46 171 233 254 254 1 LEYPHTDVSSSLEAR LNNGEVDSASDFISKLEYPHTDVSSSLEAR LEYPHTDVSSSLEARYFFYLSKINAIQLDY K L E A R Y 1 1 0 1 0 0 2 0 1 0 2 0 0 0 1 3 1 0 1 1 0 0 15 0 1702.8162 P40016 P40016 257 271 RPN3 26S proteasome regulatory subunit RPN3 yes yes 3 7.6234E-05 193.51 1 10974000 10974000 172 38 172 234 255 255 1 LEYYNLLVK ILKKTFKNPKYESLKLEYYNLLVKISLHKR KYESLKLEYYNLLVKISLHKREYLEVAQYL K L E V K I 0 0 1 0 0 0 1 0 0 0 3 1 0 0 0 0 0 0 2 1 0 0 9 0 1153.6383 Q12250 Q12250 218 226 RPN5 26S proteasome regulatory subunit RPN5 yes yes 2 0.0028038 149.65 1 554060 554060 173 57 173 235 256 256 1 LGEEDMIR LSQNELTDAIALAVRLGEEDMIRSVFDATS AIALAVRLGEEDMIRSVFDATSDPVMHKQL R L G I R S 0 1 0 1 0 0 2 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 8 0 961.45388 P38764 P38764 288 295 RPN1 26S proteasome regulatory subunit RPN1 yes yes 2 0.00066158 188.81 1 1064500 1064500 174 36 174 236 257 257 1 LGEEHPLQVAR LAPSHLWDIMGDRQRLGEEHPLQVARCTKI DRQRLGEEHPLQVARCTKIIKGNGESDETT R L G A R C 1 1 0 0 0 1 2 1 1 0 2 0 0 0 1 0 0 0 0 1 0 0 11 0 1247.6622 P33299 P33299 91 101 RPT1 26S protease regulatory subunit 7 homolog yes yes 3 0.0015999 123.79 1 2826100 2826100 175 34 175 237 258;259 259 2 LGEHNIDVLEGNEQFINAAK VVSAAHCYKSRIQVRLGEHNIDVLEGNEQF IDVLEGNEQFINAAKIITHPNFNGNTLDND R L G A K I 2 0 3 1 0 1 3 2 1 2 2 1 0 1 0 0 0 0 0 1 0 0 20 0 2210.0968 CON__P00761 CON__P00761 58 77 yes yes 2;3 1.6503E-25 299.17 3 135370000 135370000 + 176 0 176 238;239;240 260;261;262;263;264;265 264 5 LGEYGFQNALIVR EPQNLIKQNCDQFEKLGEYGFQNALIVRYT EKLGEYGFQNALIVRYTRKVPQVSTPTLVE K L G V R Y 1 1 1 0 0 1 1 2 0 1 2 0 0 1 0 0 0 0 1 1 0 0 13 0 1478.7882 CON__P02769 CON__P02769 421 433 yes yes 2 6.4376E-19 279.77 1 2597000 2597000 + 177 3 177 241 266 266 1 LGFFYNDQLYVK ISTGAKIDVMLTIARLGFFYNDQLYVKEKL IARLGFFYNDQLYVKEKLEAVNSMIEKGGD R L G V K E 0 0 1 1 0 1 0 1 0 0 2 1 0 2 0 0 0 0 2 1 0 0 12 0 1505.7555 Q06103 Q06103 177 188 RPN7 26S proteasome regulatory subunit RPN7 yes yes 2 1.8412E-06 195.27 1 0 0 178 50 178 242 267 267 1 LGQVTDISQLPR LPSLAQSTQRMVQERLGQVTDISQLPREYT QERLGQVTDISQLPREYTELEDKVDTIKLI R L G P R E 0 1 0 1 0 2 0 1 0 1 2 0 0 0 1 1 1 0 0 1 0 0 12 0 1325.7303 P40531 P40531 43 54 GVP36 Protein GVP36 yes yes 2 3.2322E-10 231.07 1 795590 795590 179 40 179 243 268 268 1 LGSQSLGVSNK AMTGKDCVAIACDLRLGSQSLGVSNKFEKI CDLRLGSQSLGVSNKFEKIFHYGHVFLGIT R L G N K F 0 0 1 0 0 1 0 2 0 0 2 1 0 0 0 3 0 0 0 1 0 0 11 0 1088.5826 P25451 P25451 29 39 PUP3 Proteasome subunit beta type-3 yes yes 2 0.0019028 141.89 1 1931800 1931800 180 26 180 244 269 269 1 LGVHEDTQNR EQFDKFYSAFAKNIKLGVHEDTQNRAALAK AKNIKLGVHEDTQNRAALAKLLRYNSTKSV K L G N R A 0 1 1 1 0 1 1 1 1 0 1 0 0 0 0 0 1 0 0 1 0 0 10 0 1167.5632 P15108;P02829 P15108 423 432 HSC82;HSP82 ATP-dependent molecular chaperone HSC82;ATP-dependent molecular chaperone HSP82 yes no 2 0.0053761 120.99 1 105300 105300 181 13 181 245 270 270 1 LHTVNTILSDLK YARELKAEVAELNHRLHTVNTILSDLKISE NHRLHTVNTILSDLKISETIPGGNTDGDSS R L H L K I 0 0 1 1 0 0 0 0 1 1 3 1 0 0 0 1 2 0 0 1 0 0 12 0 1352.7664 Q06116 Q06116 1668 1679 YPR117W Uncharacterized protein YPR117W yes yes 2 0.028603 59.153 1 0 0 182 51 182 246 271 271 6 0 LIGWYHSGPK ENMNEMCKKINAKEKLIGWYHSGPKLRASD NAKEKLIGWYHSGPKLRASDLKINELFKKY K L I P K L 0 0 0 0 0 0 0 2 1 1 1 1 0 0 1 1 0 1 1 0 0 0 10 0 1156.6029 Q08723 Q08723 89 98 RPN8 26S proteasome regulatory subunit RPN8 yes yes 2;3 0.00015431 131.06 2 4478400 4478400 183 53 183 247;248 272;273 273 2 LKDVVEYLDK RLTNQLKSLKGLQSKLKDVVEYLDKVINKE GLQSKLKDVVEYLDKVINKELPINHTILGK K L K D K V 0 0 0 2 0 0 1 0 0 0 2 2 0 0 0 0 0 0 1 2 0 0 10 1 1220.6653 Q08723 Q08723 204 213 RPN8 26S proteasome regulatory subunit RPN8 yes yes 2;3 0.0054692 144.55 2 17893000 17893000 184 53 184 249;250 274;275 274 2 LKEDDSSLYEASLNALK EDAKLKTDLELLVERLKEDDSSLYEASLNA EDDSSLYEASLNALKESIKNSTSSMTAVPK R L K L K E 2 0 1 2 0 0 2 0 0 0 4 2 0 0 0 3 0 0 1 0 0 0 17 1 1894.9524 P38764 P38764 56 72 RPN1 26S proteasome regulatory subunit RPN1 yes yes 3 9.0341E-07 169.98 1 2816700 2816700 185 36 185 251 276 276 1 LKPNDLVGVNK QTVFLPMVGLVDPDKLKPNDLVGVNKDSYL DPDKLKPNDLVGVNKDSYLILDTLPSEFDS K L K N K D 0 0 2 1 0 0 0 1 0 0 2 2 0 0 1 0 0 0 0 2 0 0 11 1 1195.6925 P33297 P33297 140 150 RPT5 26S protease regulatory subunit 6A yes yes 2;3 0.013357 115.7 2 13604000 13604000 186 32 186 252;253 277;278 277 2 LKYENEVALR LLQIDNARLAADDFRLKYENEVALRQSVEA ADDFRLKYENEVALRQSVEADINGLRRVLD R L K L R Q 1 1 1 0 0 0 2 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 10 1 1233.6717 CON__P13645 CON__P13645 236 245 yes yes 2 2.2078E-05 188.91 1 2981800 2981800 + 187 6 187 254 279 279 1 LLDNEIR EILNLSTQELQTRAKLLDNEIRIFRSELQR QELQTRAKLLDNEIRIFRSELQRLSHENNV K L L I R I 0 1 1 1 0 0 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 7 0 871.47633 P33297 P33297 36 42 RPT5 26S protease regulatory subunit 6A yes yes 2 0.026313 111.04 1 11848000 11848000 188 32 188 255 280 280 1 LLQEPGSYVGEVIK NALNDKVRFIKDELRLLQEPGSYVGEVIKI RLLQEPGSYVGEVIKIVSDKKVLVKVQPEG R L L I K I 0 0 0 0 0 1 2 2 0 1 2 1 0 0 1 1 0 0 1 2 0 0 14 0 1530.8294 Q01939 Q01939 64 77 RPT6 26S protease regulatory subunit 8 homolog yes yes 2;3 3.7222E-14 249.98 4 537940000 537940000 189 47 189 256;257;258;259 281;282;283;284;285;286;287;288;289;290;291 285 11 LNDLEEALQQAK AEQRGEHALKDARNKLNDLEEALQQAKEDL RNKLNDLEEALQQAKEDLARLLRDYQELMN K L N A K E 2 0 1 1 0 2 2 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 12 0 1370.7042 CON__P35908v2;CON__P35908 CON__P35908v2 442 453 yes no 2 1.2612E-21 308.21 1 1241600 1241600 + 190 10 190 260 292 292 1 LNPQVADINK AMIALSMILIQQTEKLNPQVADINKNFLSV QQTEKLNPQVADINKNFLSVITNKHQEGLA K L N N K N 1 0 2 1 0 1 0 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 10 0 1110.6033 P32565 P32565 671 680 RPN2 26S proteasome regulatory subunit RPN2 yes yes 2 0.0055627 125.71 1 4418600 4418600 191 31 191 261 293 293 1 LPLVGGHEGAGVVVK TDLHAWHGDWPLPVKLPLVGGHEGAGVVVK LPLVGGHEGAGVVVKLGSNVKGWKVGDLAG K L P V K L 1 0 0 0 0 0 1 4 1 0 2 1 0 0 1 0 0 0 0 4 0 0 15 0 1430.8245 P07246 P07246 88 102 ADH3 Alcohol dehydrogenase 3, mitochondrial yes yes 3 0.0043945 108.68 1 1373100 1373100 192 16 192 262 294 294 1 LRSEIDNVK NSKIEISELNRVIQRLRSEIDNVKKQISNL NRVIQRLRSEIDNVKKQISNLQQSISDAEQ R L R V K K 0 1 1 1 0 0 1 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 9 1 1072.5877 CON__P04264 CON__P04264 408 416 no no 2 0.0088029 134.77 1 1168900 1168900 + 193 4 193 263 295 295 1 LRSEIDNVKK NSKIEISELNRVIQRLRSEIDNVKKQISNL RVIQRLRSEIDNVKKQISNLQQSISDAEQR R L R K K Q 0 1 1 1 0 0 1 0 0 1 1 2 0 0 0 1 0 0 0 1 0 0 10 2 1200.6826 CON__P04264 CON__P04264 408 417 no no 2;3 1.5967E-05 182.28 2 2990400 2990400 + 194 4 194 264;265 296;297 296 2 LSEHFLYLAK SFEYEGVQDIIGNGKLSEHFLYLAKELNLT IGNGKLSEHFLYLAKELNLTGPKVPEDIYK K L S A K E 1 0 0 0 0 0 1 0 1 0 3 1 0 1 0 1 0 0 1 0 0 0 10 0 1219.6601 P38764 P38764 335 344 RPN1 26S proteasome regulatory subunit RPN1 yes yes 3 0.0010188 140.11 1 1396000 1396000 195 36 195 266 298 298 1 LSHENNVMLEK LLDNEIRIFRSELQRLSHENNVMLEKIKDN ELQRLSHENNVMLEKIKDNKEKIKNNRQLP R L S E K I 0 0 2 0 0 0 2 0 1 0 2 1 1 0 0 1 0 0 0 1 0 0 11 0 1312.6445 P33297 P33297 51 61 RPT5 26S protease regulatory subunit 6A yes yes 2;3 0.00010984 155.53 2 4596100 4596100 196 32 196 267;268 299;300 300 2 LSINDLLVK KLRQSLNATANDKYKLSINDLLVKAITVAA ANDKYKLSINDLLVKAITVAAKRVPDANAY K L S V K A 0 0 1 1 0 0 0 0 0 1 3 1 0 0 0 1 0 0 0 1 0 0 9 0 1013.6121 P12695 P12695 305 313 LAT1 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 2 0.0086607 123.35 1 179720 179720 197 21 197 269 301 301 1 LSSPATLNSR NFNGNTLDNDIMLIKLSSPATLNSRVATVS IMLIKLSSPATLNSRVATVSLPRSCAAAGT K L S S R V 1 1 1 0 0 0 0 0 0 0 2 0 0 0 1 3 1 0 0 0 0 0 10 0 1044.5564 CON__P00761 CON__P00761 98 107 yes yes 2 0.014782 112.71 2 205590000 205590000 + 198 0 198 270;271 302;303 303 2 LTGSDRV DGLLTKLQKYGAAVRLTGSDRV________ QKYGAAVRLTGSDRV_______________ R L T R V - 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 7 1 746.39227 Q06103 Q06103 423 429 RPN7 26S proteasome regulatory subunit RPN7 yes yes 2 0.012206 104.21 1 8210200 8210200 199 50 199 272 304 304 1 LVEWNDQVEK PRIISGDQITKMKDRLVEWNDQVEKLGKKM KMKDRLVEWNDQVEKLGKKMEARGQSIWV_ R L V E K L 0 0 1 1 0 1 2 0 0 0 1 1 0 0 0 0 0 1 0 2 0 0 10 0 1258.6194 Q04062 Q04062 370 379 RPN9 26S proteasome regulatory subunit RPN9 yes yes 2 0.0035361 136.52 1 2301100 2301100 200 49 200 273 305 305 1 LVTDLTK LSQKFPKAEFVEVTKLVTDLTKVHKECCHG AEFVEVTKLVTDLTKVHKECCHGDLLECAD K L V T K V 0 0 0 1 0 0 0 0 0 0 2 1 0 0 0 0 2 0 0 1 0 0 7 0 788.46437 CON__P02769;CON__P02768-1 CON__P02769 257 263 yes no 2 0.030611 108.09 1 11705000 11705000 + 201 3 201 274 306 306 1 LVVSTQTALA AADDKEACFAVEGPKLVVSTQTALA_____ VEGPKLVVSTQTALA_______________ K L V L A - 2 0 0 0 0 1 0 0 0 0 2 0 0 0 0 1 2 0 0 2 0 0 10 0 1001.5757 CON__P02769 CON__P02769 598 607 yes yes 2 0.00010595 170.3 1 3132000 3132000 + 202 3 202 275 307 307 1 LYDKTENDIK DQLKQRRQNIRDLEKLYDKTENDIKALQSI RDLEKLYDKTENDIKALQSIGQLIGEVMKE K L Y I K A 0 0 1 2 0 0 1 0 0 1 1 2 0 0 0 0 1 0 1 0 0 0 10 1 1237.619 P53549 P53549 87 96 RPT4 26S protease subunit RPT4 yes yes 2;3 3.4381E-05 166.07 2 6345600 6345600 203 46 203 276;277 308;309 309 2 LYDNFVSK TKFFDDAKSTPLRLRLYDNFVSKFYDKINQ STPLRLRLYDNFVSKFYDKINQLSVVKYLL R L Y S K F 0 0 1 1 0 0 0 0 0 0 1 1 0 1 0 1 0 0 1 1 0 0 8 0 984.49165 Q04062 Q04062 61 68 RPN9 26S proteasome regulatory subunit RPN9 yes yes 2 0.0094946 133.23 1 2646600 2646600 204 49 204 278 310 310 1 MTLDDFR TVGNNKTLLDIDNTRMTLDDFRIKFEMEQN LLDIDNTRMTLDDFRIKFEMEQNLRQGVDA R M T F R I 0 1 0 2 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 7 0 896.4062 CON__P35527 CON__P35527 234 240 yes yes 2 0.012901 134.06 1 728600 728600 + 205 9 205 279 311 311 1 MTTDDDINWQELAR SEDSRAQILQIHSRKMTTDDDINWQELARS KMTTDDDINWQELARSTDEFNGAQLKAVTV K M T A R S 1 1 1 3 0 1 1 0 0 1 1 0 1 0 0 0 2 1 0 0 0 0 14 0 1706.757 P33297 P33297 368 381 RPT5 26S protease regulatory subunit 6A yes yes 2 1.3676E-19 295.34 1 324970 324970 206 32 206 280 312 312 1 NAQYHLLVK DRVNGIVETNRPDNKNAQYHLLVKQGDGLL NRPDNKNAQYHLLVKQGDGLLTKLQKYGAA K N A V K Q 1 0 1 0 0 1 0 0 1 0 2 1 0 0 0 0 0 0 1 1 0 0 9 0 1084.6029 Q06103 Q06103 397 405 RPN7 26S proteasome regulatory subunit RPN7 yes yes 2;3 0.00021328 191.63 2 37351000 37351000 207 50 207 281;282 313;314 313 2 NFLSVITNK QQTEKLNPQVADINKNFLSVITNKHQEGLA VADINKNFLSVITNKHQEGLAKFGACVAQG K N F N K H 0 0 2 0 0 0 0 0 0 1 1 1 0 1 0 1 1 0 0 1 0 0 9 0 1034.576 P32565 P32565 681 689 RPN2 26S proteasome regulatory subunit RPN2 yes yes 2 3.078E-07 232.83 1 1529600 1529600 208 31 208 283 315 315 1 NKPGVYTK QLQGIVSWGYGCAQKNKPGVYTKVCNYVNW GYGCAQKNKPGVYTKVCNYVNWIQQTIAAN K N K T K V 0 0 1 0 0 0 0 1 0 0 0 2 0 0 1 0 1 0 1 1 0 0 8 1 905.49707 CON__P00761;CON__P07477 CON__P00761 209 216 yes no 2 0.018223 120.87 1 520590 520590 + 209 0 209 284 316 316 1 NKYEDEINKR DSELKNMQDMVEDYRNKYEDEINKRTNAEN VEDYRNKYEDEINKRTNAENEFVTIKKDVD R N K K R T 0 1 2 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 10 2 1307.647 CON__P04264;CON__H-INV:HIT000016045;CON__P02538;CON__P48668;CON__P04259;CON__Q8VED5;CON__P13647 CON__P04264 268 277 no no 2 9.1041E-07 192.26 1 1763700 1763700 + 210 4;2;7 210 285 317 317 1 NLDLDSIIAEVK SVTDTNVILSMDNSRNLDLDSIIAEVKAQY NSRNLDLDSIIAEVKAQYEEIAQRSKEEAE R N L V K A 1 0 1 2 0 0 1 0 0 2 2 1 0 0 0 1 0 0 0 1 0 0 12 0 1328.7187 CON__P35908v2;CON__P35908;CON__Q5XKE5;CON__P02538;CON__P48668;CON__P04259;CON__O95678;CON__Q8VED5;CON__P13647 CON__P35908v2 342 353 no no 2 1.1604E-21 310.77 1 414980 414980 + 211 10;2;7 211 286 318 318 1 NMQDMVEDYR DQLKSDQSRLDSELKNMQDMVEDYRNKYED DSELKNMQDMVEDYRNKYEDEINKRTNAEN K N M Y R N 0 1 1 2 0 1 1 0 0 0 0 0 2 0 0 0 0 0 1 1 0 0 10 0 1299.5224 CON__P04264 CON__P04264 258 267 yes yes 2 6.6609E-07 218.94 1 2105300 2105300 + 212 4 212 287 319 319 1 NPDYREEE ISYTSHIEGVVILKKNPDYREEE_______ GVVILKKNPDYREEE_______________ K N P E E - 0 1 1 1 0 0 3 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 8 1 1050.4254 P38764 P38764 986 993 RPN1 26S proteasome regulatory subunit RPN1 yes yes 2 0.01353 133.58 1 331890 331890 213 36 213 288 320 320 1 NPEIFQR EQIRELREVIELPLKNPEIFQRVGIKPPKG EVIELPLKNPEIFQRVGIKPPKGVLLYGPP K N P Q R V 0 1 1 0 0 1 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 7 0 902.46102 P53549 P53549 203 209 RPT4 26S protease subunit RPT4 yes yes 2 0.0062343 163.34 1 2498500 2498500 214 46 214 289 321 321 1 NQETAISVAK TQEDFELAVGKVMNKNQETAISVAKLFK__ KVMNKNQETAISVAKLFK____________ K N Q A K L 2 0 1 0 0 1 1 0 0 1 0 1 0 0 0 1 1 0 0 1 0 0 10 0 1059.556 Q01939 Q01939 393 402 RPT6 26S protease regulatory subunit 8 homolog yes yes 2 0.0049727 128.86 1 533090000 533090000 215 47 215 290 322;323 323 2 NSTSSMTAVPK SLYEASLNALKESIKNSTSSMTAVPKPLKF ESIKNSTSSMTAVPKPLKFLRPTYPDLCSI K N S P K P 1 0 1 0 0 0 0 0 0 0 0 1 1 0 1 3 2 0 0 1 0 0 11 0 1121.5387 P38764 P38764 77 87 RPN1 26S proteasome regulatory subunit RPN1 yes yes 2 0.00010984 155.53 1 468840 468840 216 36 216 291 324 324 1 NSYPASFYSVNTEK TSNHKSSVPGSAELRNSYPASFYSVNTEKK RNSYPASFYSVNTEKKTIEVTAEINCFMHL R N S E K K 1 0 2 0 0 0 1 0 0 0 0 1 0 1 1 3 1 0 2 1 0 0 14 0 1605.7311 P40016 P40016 112 125 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 8.4356E-14 240.18 1 2815400 2815400 217 38 217 292 325 325 1 NVQDAIADAEQR QRLQGEIAHVKKQCKNVQDAIADAEQRGEH QCKNVQDAIADAEQRGEHALKDARNKLNDL K N V Q R G 3 1 1 2 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 12 0 1328.6321 CON__P35908v2;CON__P35908 CON__P35908v2 419 430 yes no 2 1.4387E-07 216.91 1 1289600 1289600 + 218 10 218 293 326 326 1 NVTIQLENADTGTLDTK FGACVAQGIMNAGGRNVTIQLENADTGTLD TIQLENADTGTLDTKSVVGLVMFSQFWYWF R N V T K S 1 0 2 2 0 1 1 1 0 1 2 1 0 0 0 0 4 0 0 1 0 0 17 0 1831.9163 P32565 P32565 712 728 RPN2 26S proteasome regulatory subunit RPN2 yes yes 2 1.5666E-31 307.43 1 1130500 1130500 219 31 219 294 327 327 1 PTHDHIIR WDLCLLMKDHGLLAKPTHDHIIRLAPPLVI DHGLLAKPTHDHIIRLAPPLVISEEDLQTG K P T I R L 0 1 0 1 0 0 0 0 2 2 0 0 0 0 1 0 1 0 0 0 0 0 8 0 987.52501 P07991 P07991 391 398 CAR2 Ornithine aminotransferase yes yes 2 0.023044 110.81 1 125900 125900 220 17 220 295 328 328 1 QAVVNPENTLFATK FTKEGERLVGIPAKRQAVVNPENTLFATKR RQAVVNPENTLFATKRLIGRRFEDAEVQRD R Q A T K R 2 0 2 0 0 1 1 0 0 0 1 1 0 1 1 0 2 0 0 2 0 0 14 0 1530.8042 P0CS90 P0CS90 85 98 SSC1 Heat shock protein SSC1, mitochondrial yes yes 2 2.115E-09 206.36 1 1160200 1160200 221 18 221 296 329 329 1 QELADDLITK TRGLAVGLALINYGRQELADDLITKMLASD INYGRQELADDLITKMLASDESLLRYGGAF R Q E T K M 1 0 0 2 0 1 1 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 10 0 1144.5976 P32565 P32565 529 538 RPN2 26S proteasome regulatory subunit RPN2 yes yes 2 0.033922 101.38 1 462680 462680 222 31 222 297 330 330 1 QGVDADINGLR LDDFRIKFEMEQNLRQGVDADINGLRQVLD QNLRQGVDADINGLRQVLDNLTMEKSDLEM R Q G L R Q 1 1 1 2 0 1 0 2 0 1 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1156.5836 CON__P35527 CON__P35527 251 261 yes yes 2 0.0018872 142 1 2512700 2512700 + 223 9 223 298 331 331 1 QISNLQQSISDAEQR RVIQRLRSEIDNVKKQISNLQQSISDAEQR QISNLQQSISDAEQRGENALKDAKNKLNDL K Q I Q R G 1 1 1 1 0 4 1 0 0 2 1 0 0 0 0 3 0 0 0 0 0 0 15 0 1715.8438 CON__P04264 CON__P04264 418 432 yes yes 3 0.00031638 219.84 1 2945800 2945800 + 224 4 224 299 332 332 1 QLAYILAAQK IRSVFDATSDPVMHKQLAYILAAQKTSFEY PVMHKQLAYILAAQKTSFEYEGVQDIIGNG K Q L Q K T 3 0 0 0 0 2 0 0 0 1 2 1 0 0 0 0 0 0 1 0 0 0 10 0 1117.6495 P38764 P38764 309 318 RPN1 26S proteasome regulatory subunit RPN1 yes yes 2 0.0018802 145.34 1 1049900 1049900 225 36 225 300 333 333 1 QLDSIVGER NLEPLFEQYINNLRRQLDSIVGERGRLDSE INNLRRQLDSIVGERGRLDSELRNMQDLVE R Q L E R G 0 1 0 1 0 1 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 9 0 1015.5298 CON__P02538;CON__P48668;CON__P04259;CON__P13647 CON__P13647 229 237 no no 2 0.0012493 166.07 1 1609900 1609900 + 226 2;7 226 301 334 334 1 QQGVGLPTDAYVAIEQVK KYTQNNPLLLIVDVKQQGVGLPTDAYVAIE VGLPTDAYVAIEQVKDDGTSTEKTFLHLPC K Q Q V K D 2 0 0 1 0 3 1 2 0 1 1 1 0 0 1 0 1 0 1 3 0 0 18 0 1915.0051 Q08723 Q08723 127 144 RPN8 26S proteasome regulatory subunit RPN8 yes yes 2;3 4.8781E-11 215.09 2 1646600 1646600 227 53 227 302;303 335;336 335 2 QQQQQQDQPEQSEQPEQHQDK RLSMEEEQQRQERLRQQQQQQDQPEQSEQP DQPEQSEQPEQHQDK_______________ R Q Q D K - 0 0 0 2 0 11 3 0 1 0 0 1 0 0 2 1 0 0 0 0 0 0 21 0 2590.128 P38886 P38886 248 268 RPN10 26S proteasome regulatory subunit RPN10 yes yes 3 0.00049114 118.23 1 169790 169790 228 37 228 304 337 337 1 QSLEASLAETEGR VQALEIELQSQLALKQSLEASLAETEGRYC LKQSLEASLAETEGRYCVQLSQIQAQISAL K Q S G R Y 2 1 0 0 0 1 3 1 0 0 2 0 0 0 0 2 1 0 0 0 0 0 13 0 1389.6736 CON__P13645;CON__P02535-1 CON__P13645 387 399 yes no 2 4.5576E-26 322.23 1 4395500 4395500 + 229 6 229 305 338 338 1 QSLGHGQHGSGSGQSPSPSR SGSSSSYGQHGSGSRQSLGHGQHGSGSGQS GQHGSGSGQSPSPSRGRHGSGSGQSSSYGP R Q S S R G 0 1 0 0 0 3 0 5 2 0 1 0 0 0 2 6 0 0 0 0 0 0 20 0 1946.8943 CON__Q86YZ3 CON__Q86YZ3 992 1011 yes no 3 0.0023049 120.74 1 0 0 + 230 11 230 306 339 339 1 QSVEADINGLR ADDFRLKYENEVALRQSVEADINGLRRVLD VALRQSVEADINGLRRVLDELTLTKADLEM R Q S L R R 1 1 1 1 0 1 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 11 0 1200.6099 CON__P13645;CON__P02535-1;CON__Q2M2I5 CON__P13645 246 256 no no 2 3.9905E-06 205.59 1 0 0 + 231 6 231 307 340 340 1 QSVEADINGLRR ADDFRLKYENEVALRQSVEADINGLRRVLD ALRQSVEADINGLRRVLDELTLTKADLEMQ R Q S R R V 1 2 1 1 0 1 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 12 1 1356.711 CON__P13645;CON__P02535-1 CON__P13645 246 257 no no 3 0.031993 51.979 1 2439500 2439500 + 232 6 232 308 341 341 1 QTALVELLK ADICTLPDTEKQIKKQTALVELLKHKPKAT EKQIKKQTALVELLKHKPKATEEQLKTVME K Q T L K H 1 0 0 0 0 1 1 0 0 0 3 1 0 0 0 0 1 0 0 1 0 0 9 0 1013.6121 CON__P02769 CON__P02769 549 557 yes yes 2 0.0015403 159.28 1 4764600 4764600 + 233 3 233 309 342 342 1 QTENDLKDIEAR VLKSYGAAPYAAKLKQTENDLKDIEARIKE KLKQTENDLKDIEARIKEKAGVKESDTGLA K Q T A R I 1 1 1 2 0 1 2 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 12 1 1430.7001 P33299 P33299 51 62 RPT1 26S protease regulatory subunit 7 homolog yes yes 2;3 5.2007E-07 199.03 2 3386700 3386700 234 34 234 310;311 343;344 344 2 QTTSNTGLLNK RLIDTGALINNLEPRQTTSNTGLLNKANIQ LEPRQTTSNTGLLNKANIQALIHGLNRHYY R Q T N K A 0 0 2 0 0 1 0 1 0 0 2 1 0 0 0 1 3 0 0 0 0 0 11 0 1175.6146 P43588 P43588 172 182 RPN11 Ubiquitin carboxyl-terminal hydrolase RPN11 yes yes 2 0.025464 104.42 1 1076100 1076100 235 41 235 312 345 345 1 QTVFLPMVGLVDPDK NTAVGKAAVVKTSSRQTVFLPMVGLVDPDK QTVFLPMVGLVDPDKLKPNDLVGVNKDSYL R Q T D K L 0 0 0 2 0 1 0 1 0 0 2 1 1 1 2 0 1 0 0 3 0 0 15 0 1657.8749 P33297 P33297 125 139 RPT5 26S protease regulatory subunit 6A yes yes 2 1.6354E-09 194.98 1 270120 270120 236 32 236 313 346;347;348 347 3 RFEDAEVQR NPENTLFATKRLIGRRFEDAEVQRDIKQVP KRLIGRRFEDAEVQRDIKQVPYKIVKHSNG R R F Q R D 1 2 0 1 0 1 2 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 9 1 1148.5574 P0CS90;P39987 P0CS90 104 112 SSC1;ECM10 Heat shock protein SSC1, mitochondrial;Heat shock protein SSC3, mitochondrial yes no 2 0.0013187 144.65 1 320460 320460 237 18 237 314 349 349 1 RFSEGTSADR PCIIFMDEVDAIGGRRFSEGTSADREIQRT AIGGRRFSEGTSADREIQRTLMELLTQMDG R R F D R E 1 2 0 1 0 0 1 1 0 0 0 0 0 1 0 2 1 0 0 0 0 0 10 1 1124.521 P53549 P53549 290 299 RPT4 26S protease subunit RPT4 yes yes 2 0.013569 97.597 1 1504600 1504600 238 46 238 315 350 350 1 RHPEYAVSVLLR AKDAFLGSFLYEYSRRHPEYAVSVLLRLAK YSRRHPEYAVSVLLRLAKEYEATLEECCAK R R H L R L 1 2 0 0 0 0 1 0 1 0 2 0 0 0 1 1 0 0 1 2 0 0 12 1 1438.8045 CON__P02769 CON__P02769 360 371 yes yes 2;3 0.00025008 173.19 2 6981400 6981400 + 239 3 239 316;317 351;352 352 2 RIHVTQEDFELAVGK KGVCTEAGMYALRERRIHVTQEDFELAVGK RIHVTQEDFELAVGKVMNKNQETAISVAKL R R I G K V 1 1 0 1 0 1 2 1 1 1 1 1 0 1 0 0 1 0 0 2 0 0 15 1 1740.9159 Q01939 Q01939 374 388 RPT6 26S protease regulatory subunit 8 homolog yes yes 2;3 4.9401E-10 247.11 2 59039000 59039000 240 47 240 318;319 353;354 353 2 RLIFGTIASK DRKIEFPSLRDRRERRLIFGTIASKMSLAP DRRERRLIFGTIASKMSLAPEADLDSLIIR R R L S K M 1 1 0 0 0 0 0 1 0 2 1 1 0 1 0 1 1 0 0 0 0 0 10 1 1104.6655 P33298 P33298 350 359 RPT3 26S protease regulatory subunit 6B homolog yes yes 2 0.0018344 126.31 1 793170 793170 241 33 241 320 355 355 1 RYDDQLK NKALNQFKRKLLEHRRYDDQLKQRRQNIRD KRKLLEHRRYDDQLKQRRQNIRDLEKLYDK R R Y L K Q 0 1 0 2 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 7 1 936.46649 P53549 P53549 69 75 RPT4 26S protease subunit RPT4 yes yes 2 0.004276 134.81 1 4943400 4943400 242 46 242 321 356 356 1 SDGSAATSGFEFSK VEKDAEDETSSDGSKSDGSAATSGFEFSKE KSDGSAATSGFEFSKEDTLRLCLDIVPYFL K S D S K E 2 0 0 1 0 0 1 2 0 0 0 1 0 2 0 4 1 0 0 0 0 0 14 0 1389.6048 P38764 P38764 184 197 RPN1 26S proteasome regulatory subunit RPN1 yes yes 2 4.7771E-19 276.17 1 1541100 1541100 243 36 243 322 357 357 1 SDSYMLHK INVKDLKASQRVCLRSDSYMLHKVLENKAD SQRVCLRSDSYMLHKVLENKADPLVSLMMV R S D H K V 0 0 0 1 0 0 0 0 1 0 1 1 1 0 0 2 0 0 1 0 0 0 8 0 979.44332 Q01939 Q01939 117 124 RPT6 26S protease regulatory subunit 8 homolog yes yes 2 0.0084823 137.18 1 52665000 52665000 244 47 244 323 358 358 1 SEIDNVKK KIEISELNRVIQRLRSEIDNVKKQISNLQQ RVIQRLRSEIDNVKKQISNLQQSISDAEQR R S E K K Q 0 0 1 1 0 0 1 0 0 1 0 2 0 0 0 1 0 0 0 1 0 0 8 1 931.49746 CON__P04264 CON__P04264 410 417 no no 2 0.00064628 176.09 1 1260500 1260500 + 245 4 245 324 359 359 1 SEISELRR NREVATNSELVQSGKSEISELRRTMQNLEI ELVQSGKSEISELRRTMQNLEIELQSQLSM K S E R R T 0 2 0 0 0 0 2 0 0 1 1 0 0 0 0 2 0 0 0 0 0 0 8 1 988.53016 CON__P02533;CON__Q04695;CON__Q9QWL7 CON__P02533 329 336 yes no 2 0.0029704 135.84 1 599270 599270 + 246 1 246 325 360 360 1 SEITELRR TTEIDNNIEQISSYKSEITELRRNVQALEI EQISSYKSEITELRRNVQALEIELQSQLAL K S E R R N 0 2 0 0 0 0 2 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 8 1 1002.5458 CON__P13645;CON__P02535-1 CON__P13645 363 370 yes no 2 0.018483 89.142 1 1513600 1513600 + 247 6 247 326 361 361 1 SEQHGSSSGLSSSYGQHGSGSHQSSGHGR SGYRKHGSRSGQSSRSEQHGSSSGLSSSYG GQHGSGSHQSSGHGRQGSGSGHSPSRVRHG R S E G R Q 0 1 0 0 0 3 1 7 4 0 1 0 0 0 0 11 0 0 1 0 0 0 29 0 2868.2156 CON__Q86YZ3 CON__Q86YZ3 739 767 yes yes 4 0.03435 66.972 1 151880 151880 + 248 11 248 327 362 362 1 SFEQLNSR GFGCWLSSVDVNTQKSFEQLNSRAVAVVVD VDVNTQKSFEQLNSRAVAVVVDPIQSVKGK K S F S R A 0 1 1 0 0 1 1 0 0 0 1 0 0 1 0 2 0 0 0 0 0 0 8 0 979.47231 P43588 P43588 128 135 RPN11 Ubiquitin carboxyl-terminal hydrolase RPN11 yes yes 2 0.0087161 136.27 1 739160 739160 249 41 249 328 363 363 1 SFSTASAITPSVSR MSRQSSVSFRSGGSRSFSTASAITPSVSRT RSFSTASAITPSVSRTSFTSVSRSGGGGGG R S F S R T 2 1 0 0 0 0 0 0 0 1 0 0 0 1 1 5 2 0 0 1 0 0 14 0 1409.7151 CON__P13647 CON__P13647 16 29 no no 2 7.9661E-10 220.29 1 968330 968330 + 250 7 250 329 364 364 1 SGGGFSSGSAGIINYQR ______________________________ GGFSSGSAGIINYQRRTTSSSTRRSGGGGG R S G Q R R 1 1 1 0 0 1 0 5 0 2 0 0 0 1 0 4 0 0 1 0 0 0 17 0 1656.7856 CON__P04264 CON__P04264 13 29 yes yes 2 4.977E-24 282.05 1 1754300 1754300 + 251 4 251 330 365 365 1 SGGGGGGGLGSGGSIR ______________________________ GGGGGGGLGSGGSIRSSYSRFSSSGGRGGG R S G I R S 0 1 0 0 0 0 0 10 0 1 1 0 0 0 0 3 0 0 0 0 0 0 16 0 1231.5905 CON__P35527 CON__P35527 14 29 yes yes 2 2.0847E-16 234.87 1 7574000 7574000 + 252 9 252 331 366 366 1 SIIAFDDLIENK TNDELMVIYISNLVRSIIAFDDLIENKIQN LVRSIIAFDDLIENKIQNKKIQEQRVKDKQ R S I N K I 1 0 1 2 0 0 1 0 0 3 1 1 0 1 0 1 0 0 0 0 0 0 12 0 1376.7187 Q08723 Q08723 284 295 RPN8 26S proteasome regulatory subunit RPN8 yes yes 2 2.5612E-11 263.11 1 4860900 4860900 253 53 253 332 367 367 1 SISISVAR GGFGSRSLVNLGGSKSISISVARGGGRGSG VNLGGSKSISISVARGGGRGSGFGGGYGGG K S I A R G 1 1 0 0 0 0 0 0 0 2 0 0 0 0 0 3 0 0 0 1 0 0 8 0 831.48142 CON__P04264 CON__P04264 75 82 yes yes 2 0.0040063 155 1 3772800 3772800 + 254 4 254 333 368 368 1 SISIVGSYVGNR AGAKCCSDVFNQVVKSISIVGSYVGNRADT VVKSISIVGSYVGNRADTREALDFFARGLV K S I N R A 0 1 1 0 0 0 0 2 0 2 0 0 0 0 0 3 0 0 1 2 0 0 12 0 1250.6619 P00330;P00331 P00330 288 299 ADH1;ADH2 Alcohol dehydrogenase 1;Alcohol dehydrogenase 2 yes no 2 2.745E-10 236.32 1 812820 812820 255 12 255 334 369 369 1 SKAEAESLYQSK IIAEVKAQNEDIAQKSKAEAESLYQSKYEE AQKSKAEAESLYQSKYEELQITAGRHGDSV K S K S K Y 2 0 0 0 0 1 2 0 0 0 1 2 0 0 0 3 0 0 1 0 0 0 12 1 1339.662 CON__P04264 CON__P04264 365 376 yes yes 2;3 4.4658E-15 322.07 2 17164000 17164000 + 256 4 256 335;336 370;371 370 2 SKAEAESLYQSKYEELQITAGR IIAEVKAQNEDIAQKSKAEAESLYQSKYEE LYQSKYEELQITAGRHGDSVRNSKIEISEL K S K G R H 3 1 0 0 0 2 4 1 0 1 2 2 0 0 0 3 1 0 2 0 0 0 22 2 2500.2445 CON__P04264 CON__P04264 365 386 yes yes 3 1.5729E-07 181.23 1 716590 716590 + 257 4 257 337 372 372 1 SKEEAEALYHSK IIAEVKAQYEEIAQRSKEEAEALYHSKYEE AQRSKEEAEALYHSKYEELQVTVGRHGDSL R S K S K Y 2 0 0 0 0 0 3 0 1 0 1 2 0 0 0 2 0 0 1 0 0 0 12 1 1390.6729 CON__P35908v2;CON__P35908 CON__P35908v2 363 374 yes no 2;3 2.722E-10 250.26 2 2360400 2360400 + 258 10 258 338;339 373;374 374 2 SLDLDSIIAEVK QISETNVILSMDNNRSLDLDSIIAEVKAQN NNRSLDLDSIIAEVKAQNEDIAQKSKAEAE R S L V K A 1 0 0 2 0 0 1 0 0 2 2 1 0 0 0 2 0 0 0 1 0 0 12 0 1301.7078 CON__P04264 CON__P04264 344 355 no no 2 1.4501E-15 295.32 1 1510300 1510300 + 259 4 259 340 375 375 1 SLGFLQQSNK EYIIAAIRKAPHNSKSLGFLQQSNKLHCCI PHNSKSLGFLQQSNKLHCCIQLLMGDIPEL K S L N K L 0 0 1 0 0 2 0 1 0 0 2 1 0 1 0 2 0 0 0 0 0 0 10 0 1120.5877 P40016 P40016 306 315 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 4.5136E-10 257.27 1 12324000 12324000 260 38 260 341 376 376 1 SLLDFNTALK GIDAMKAVAEAYNNRSLLDFNTALKQYEKE AYNNRSLLDFNTALKQYEKELMGDELTRSH R S L L K Q 1 0 1 1 0 0 0 0 0 0 3 1 0 1 0 1 1 0 0 0 0 0 10 0 1120.6128 Q12377 Q12377 310 319 RPN6 26S proteasome regulatory subunit RPN6 yes yes 2 5.9672E-05 179.81 1 1206500 1206500 261 58 261 342 377 377 1 SLLEGEGSSGGGGR LDIKIRLENEIQTYRSLLEGEGSSGGGGRG RSLLEGEGSSGGGGRGGGSFGGGYGGGSSG R S L G R G 0 1 0 0 0 0 2 6 0 0 2 0 0 0 0 3 0 0 0 0 0 0 14 0 1261.5899 CON__P13645 CON__P13645 451 464 yes yes 2 2.6761E-14 257.72 1 6761900 6761900 + 262 6 262 343 378 378 1 SLLPYYHLTK DIPELSFFHQSNMQKSLLPYYHLTKAVKLG SNMQKSLLPYYHLTKAVKLGDLKKFTSTIT K S L T K A 0 0 0 0 0 0 0 0 1 0 3 1 0 0 1 1 1 0 2 0 0 0 10 0 1233.6758 P40016 P40016 341 350 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 0.029703 103.88 1 2656200 2656200 263 38 263 344 379 379 1 SLNNQFASFIDK PEIQKVKSREREQIKSLNNQFASFIDKVRF QIKSLNNQFASFIDKVRFLEQQNQVLQTKW K S L D K V 1 0 2 1 0 1 0 0 0 1 1 1 0 2 0 2 0 0 0 0 0 0 12 0 1382.683 CON__P04264 CON__P04264 186 197 no no 2 5.1853E-15 275.48 1 3580600 3580600 + 264 4 264 345 380 380 1 SLNNQFASFIDKVR PEIQKVKSREREQIKSLNNQFASFIDKVRF KSLNNQFASFIDKVRFLEQQNQVLQTKWEL K S L V R F 1 1 2 1 0 1 0 0 0 1 1 1 0 2 0 2 0 0 0 1 0 0 14 1 1637.8526 CON__P04264 CON__P04264 186 199 no no 3 0.014012 94.673 1 203720 203720 + 265 4 265 346 381 381 1 SLVGLGGTK GGGGGGFGGGGFGSRSLVGLGGTKSISISV GGFGSRSLVGLGGTKSISISVAGGGGGFGA R S L T K S 0 0 0 0 0 0 0 3 0 0 2 1 0 0 0 1 1 0 0 1 0 0 9 0 830.48617 CON__P35908v2;CON__P35908 CON__P35908v2 62 70 yes no 2 0.034978 81.191 1 2761200 2761200 + 266 10 266 347 382 382 0 SLVNLGGSK GGGGSFGAGGGFGSRSLVNLGGSKSISISV GGFGSRSLVNLGGSKSISISVARGGGRGSG R S L S K S 0 0 1 0 0 0 0 2 0 0 2 1 0 0 0 2 0 0 0 1 0 0 9 0 873.49198 CON__P04264 CON__P04264 66 74 yes yes 2 0.0087533 122.94 1 12379000 12379000 + 267 4 267 348 383 383 1 SQEVEYVDPTVNR ______________________________ EKSQEVEYVDPTVNRVPNYEVSEKAFLLTQ K S Q N R V 0 1 1 1 0 1 2 0 0 0 0 0 0 0 1 1 1 0 1 3 0 0 13 0 1534.7264 Q06103 Q06103 8 20 RPN7 26S proteasome regulatory subunit RPN7 yes yes 2;3 5.0501E-19 322.77 2 64327000 64327000 268 50 268 349;350 384;385 384 2 SQVDEIVLVGGSTR LDPVEKVLRDAKLDKSQVDEIVLVGGSTRI KSQVDEIVLVGGSTRIPKVQKLVTDYFNGK K S Q T R I 0 1 0 1 0 1 1 2 0 1 1 0 0 0 0 2 1 0 0 3 0 0 14 0 1458.7678 P10592;P10591 P10592 326 339 SSA2;SSA1 Heat shock protein SSA2;Heat shock protein SSA1 yes no 2 6.4826E-15 263.89 1 476570 476570 269 19 269 351 386 386 1 SQYEQLAEQNR AAPGVDLTQLLNNMRSQYEQLAEQNRKDAE NNMRSQYEQLAEQNRKDAEAWFNEKSKELT R S Q N R K 1 1 1 0 0 3 2 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 11 0 1364.6321 CON__P13645 CON__P13645 323 333 yes yes 2 3.2827E-21 314.35 1 5431500 5431500 + 270 6 270 352 387 387 1 SQYEQLAEQNRK AAPGVDLTQLLNNMRSQYEQLAEQNRKDAE NMRSQYEQLAEQNRKDAEAWFNEKSKELTT R S Q R K D 1 1 1 0 0 3 2 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 12 1 1492.727 CON__P13645 CON__P13645 323 334 yes yes 2 1.1257E-05 175.49 1 12408000 12408000 + 271 6 271 353 388 388 1 SSVPGSAELR SFKKNLLKFITSNHKSSVPGSAELRNSYPA TSNHKSSVPGSAELRNSYPASFYSVNTEKK K S S L R N 1 1 0 0 0 0 1 1 0 0 1 0 0 0 1 3 0 0 0 1 0 0 10 0 1001.5142 P40016 P40016 102 111 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 0.019649 109.83 1 7715200 7715200 272 38 272 354 389 389 1 STLAALAPAFTK NSLNDDYEKKHDLLKSTLAALAPAFTKKDA LLKSTLAALAPAFTKKDAEFVEAGVTKSCL K S T T K K 4 0 0 0 0 0 0 0 0 0 2 1 0 1 1 1 2 0 0 0 0 0 12 0 1189.6707 Q03661 Q03661 731 742 ESC1 Silent chromatin protein ESC1 yes yes 2 3.8817E-05 162.36 1 1211600 1211600 273 48 273 355 390 390 1 STMQELNSR GAGGGDGGILTANEKSTMQELNSRLASYLD LTANEKSTMQELNSRLASYLDKVQALEEAN K S T S R L 0 1 1 0 0 1 1 0 0 0 1 0 1 0 0 2 1 0 0 0 0 0 9 0 1064.4921 CON__P35527 CON__P35527 155 163 yes yes 2 0.020886 110.53 1 1926700 1926700 + 274 9 274 356 391 391 1 STQGPIVADK GVKFNNGVVIAADTRSTQGPIVADKNCAKL AADTRSTQGPIVADKNCAKLHRISPKIWCA R S T D K N 1 0 0 1 0 1 0 1 0 1 0 1 0 0 1 1 1 0 0 1 0 0 10 0 1014.5346 P25043 P25043 49 58 PUP1 Proteasome subunit beta type-2 yes yes 2 0.0013212 148.32 1 1176100 1176100 275 25 275 357 392 392 1 TDATFIR PGTGKTLCARAVANRTDATFIRVIGSELVQ CARAVANRTDATFIRVIGSELVQKYVGEGA R T D I R V 1 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 2 0 0 0 0 0 7 0 822.42357 P33299 P33299 267 273 RPT1 26S protease regulatory subunit 7 homolog yes yes 2 0.036313 120.49 1 0 0 276 34 276 358 393 393 1 TDNTVDKFDFYK ILQSDLEEAYATQVKTDNTVDKFDFYK___ QVKTDNTVDKFDFYK_______________ K T D Y K - 0 0 1 3 0 0 0 0 0 0 0 2 0 2 0 0 2 0 1 1 0 0 12 1 1491.6882 P33298 P33298 417 428 RPT3 26S protease regulatory subunit 6B homolog yes yes 3 0.0010214 132.86 1 1029700 1029700 277 33 277 359 394 394 1 TEAESWYQTK AEVKAQYEEIANRSRTEAESWYQTKYEELQ ANRSRTEAESWYQTKYEELQQTAGRHGDDL R T E T K Y 1 0 0 0 0 1 2 0 0 0 0 1 0 0 0 1 2 1 1 0 0 0 10 0 1241.5564 CON__P13647 CON__P13647 355 364 no no 2 0.0040092 133.99 1 782320 782320 + 278 7 278 360 395 395 1 TEELNKEVASNSELVQSSR AEKNRRDAETWFLSKTEELNKEVASNSELV NKEVASNSELVQSSRSEVTELRRVLQGLEI K T E S R S 1 1 2 0 0 1 4 0 0 0 2 1 0 0 0 4 1 0 0 2 0 0 19 1 2119.0393 CON__P08779 CON__P08779 312 330 yes yes 3 0.010324 91.926 1 976660 976660 + 279 5 279 361 396 396 1 TFGAISLSTDYEDSK DKAIILGAEGNFHGRTFGAISLSTDYEDSK TFGAISLSTDYEDSKLHFGPFVPNVASGHS R T F S K L 1 0 0 2 0 0 1 1 0 1 1 1 0 1 0 3 2 0 1 0 0 0 15 0 1632.7519 P07991 P07991 149 163 CAR2 Ornithine aminotransferase yes yes 2 4.911E-14 234.92 1 316280 316280 280 17 280 362 397 397 1 TGEFDFEAAVK GRLEIFKIHTAKVKKTGEFDFEAAVKMSDG KVKKTGEFDFEAAVKMSDGFNGADIRNCAT K T G V K M 2 0 0 1 0 0 2 1 0 0 0 1 0 2 0 0 1 0 0 1 0 0 11 0 1212.5663 P53549 P53549 371 381 RPT4 26S protease subunit RPT4 yes yes 2 7.732E-05 166.34 1 3713200 3713200 281 46 281 363 398 398 1 TLLDIDNTR DLKDQIVDLTVGNNKTLLDIDNTRMTLDDF TVGNNKTLLDIDNTRMTLDDFRIKFEMEQN K T L T R M 0 1 1 2 0 0 0 0 0 1 2 0 0 0 0 0 2 0 0 0 0 0 9 0 1059.556 CON__P35527 CON__P35527 225 233 yes yes 2 0.019145 111.61 1 4910400 4910400 + 282 9 282 364 399 399 1 TLLEGEESR MNTKLALDLEIATYRTLLEGEESRMSGECA EIATYRTLLEGEESRMSGECAPNVSVSVST R T L S R M 0 1 0 0 0 0 3 1 0 0 2 0 0 0 0 1 1 0 0 0 0 0 9 0 1032.5088 CON__P04264 CON__P04264 484 492 no no 2 0.027135 106.68 1 9688900 9688900 + 283 4 283 365 400 400 1 TLSDYNIQK QQRLIFAGKQLEDGRTLSDYNIQKESTLHL QLEDGRTLSDYNIQKESTLHLVLRLRGGII R T L Q K E 0 0 1 1 0 1 0 0 0 1 1 1 0 0 0 1 1 0 1 0 0 0 9 0 1080.5451 P0CH09;P0CH08;P05759;P0CG63 P0CH09 55 63 RPL40B;RPL40A;RPS31;UBI4 Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S31;Ubiquitin;40S ribosomal protein S31;Polyubiquitin;Ubiquitin yes no 2 5.9301E-05 208.37 1 2182100 2182100 284 14 284 366 401 401 1 TMLELLNQLDGFETSK TRVEGSGGGDSEVQRTMLELLNQLDGFETS MLELLNQLDGFETSKNIKIIMATNRLDILD R T M S K N 0 0 1 1 0 1 2 1 0 0 4 1 1 1 0 1 2 0 0 0 0 0 16 0 1837.9132 Q01939 Q01939 271 286 RPT6 26S protease regulatory subunit 8 homolog yes yes 2 9.0681E-11 212.17 1 103850 103850 285 47 285 367 402;403 402 2 TNAENEFVTIK VEDYRNKYEDEINKRTNAENEFVTIKKDVD INKRTNAENEFVTIKKDVDGAYMTKVDLQA R T N I K K 1 0 2 0 0 0 2 0 0 1 0 1 0 1 0 0 2 0 0 1 0 0 11 0 1264.6299 CON__P04264 CON__P04264 278 288 yes yes 2 3.9525E-07 218.55 1 9773500 9773500 + 286 4 286 368 404 404 1 TNAENEFVTIKK VEDYRNKYEDEINKRTNAENEFVTIKKDVD NKRTNAENEFVTIKKDVDGAYMTKVDLQAK R T N K K D 1 0 2 0 0 0 2 0 0 1 0 2 0 1 0 0 2 0 0 1 0 0 12 1 1392.7249 CON__P04264 CON__P04264 278 289 yes yes 2;3 0.00053155 153.74 2 3857900 3857900 + 287 4 287 369;370 405;406 405 2 TPANAAVPASTPLK ADAAKGYKPVAVPARTPANAAVPASTPLKQ RTPANAAVPASTPLKQEWMWNQLGNFLQEG R T P L K Q 4 0 1 0 0 0 0 0 0 0 1 1 0 0 3 1 2 0 0 1 0 0 14 0 1336.7351 P06169 P06169 353 366 PDC1 Pyruvate decarboxylase isozyme 1 yes yes 2 3.0301E-09 196.7 1 1174900 1174900 288 15 288 371 407 407 1 TRLEQEIATYR MEQQNQEYKILLDVKTRLEQEIATYRRLLE LDVKTRLEQEIATYRRLLEGEDAHLSSSQF K T R Y R R 1 2 0 0 0 1 2 0 0 1 1 0 0 0 0 0 2 0 1 0 0 0 11 1 1378.7205 CON__P08779;CON__P19012;CON__A2A4G1;CON__Q9Z2K1;CON__Q3ZAW8;CON__Q61782;CON__P35900;CON__Q9D312;CON__P02533;CON__Q04695;CON__Q9QWL7;CON__Q6IFX2 CON__P02533 406 416 no no 2 0.0042987 134.3 1 509400 509400 + 289 5;1 289 372 408 408 1 TSQNSELNNMQDLVEDYKK IDSLKRYLDGLTAERTSQNSELNNMQDLVE SELNNMQDLVEDYKKKYEDEINKRTAAEND R T S K K K 0 0 3 2 0 2 2 0 0 0 2 2 1 0 0 2 1 0 1 1 0 0 19 1 2255.0376 CON__P35908v2;CON__P35908 CON__P35908v2 248 266 yes no 3 0.024559 52.93 1 368980 368980 + 290 10 290 373 409 409 1 TVMENFVAFVDK ELLKHKPKATEEQLKTVMENFVAFVDKCCA QLKTVMENFVAFVDKCCAADDKEACFAVEG K T V D K C 1 0 1 1 0 0 1 0 0 0 0 1 1 2 0 0 1 0 0 3 0 0 12 0 1398.6853 CON__P02769 CON__P02769 569 580 yes yes 2 3.2322E-10 231.07 1 208330 208330 + 291 3 291 374 410 410 1 VAIAALEVIR GSHGSTFGGNPLASRVAIAALEVIRDEKLC PLASRVAIAALEVIRDEKLCQRAAQLGSSF R V A I R D 3 1 0 0 0 0 1 0 0 2 1 0 0 0 0 0 0 0 0 2 0 0 10 0 1053.6546 P07991 P07991 312 321 CAR2 Ornithine aminotransferase yes yes 2 0.0014737 147.51 1 366320 366320 292 17 292 375 411 411 1 VATAVLSTTAR YPRMYEEASGKEVEKVATAVLSTTARAKAR EVEKVATAVLSTTARAKARAKKTKKEKGPN K V A A R A 3 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 3 0 0 2 0 0 11 0 1088.619 P32565 P32565 799 809 RPN2 26S proteasome regulatory subunit RPN2 yes yes 2 5.3082E-07 215.06 1 3695600 3695600 293 31 293 376 412 412 1 VATVSLPR IMLIKLSSPATLNSRVATVSLPRSCAAAGT PATLNSRVATVSLPRSCAAAGTECLISGWG R V A P R S 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 2 0 0 8 0 841.50215 CON__P00761 CON__P00761 108 115 yes yes 2 0.012774 120.46 2 663660000 663660000 + 294 0 294 377;378 413;414 413 2 VDDNVDFPSA RQMKDVNAPLPTPFKVDDNVDFPSA_____ PTPFKVDDNVDFPSA_______________ K V D S A - 1 0 1 3 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 2 0 0 10 0 1077.4615 P32565 P32565 936 945 RPN2 26S proteasome regulatory subunit RPN2 yes yes 2 0.0028562 140.14 1 517650 517650 295 31 295 379 415 415 1 VDIIANDQGNR LGTTYSCVAHFSNDRVDIIANDQGNRTTPS SNDRVDIIANDQGNRTTPSFVGFTDTERLI R V D N R T 1 1 2 2 0 1 0 1 0 2 0 0 0 0 0 0 0 0 0 1 0 0 11 0 1213.6051 P10592;P10591 P10592 24 34 SSA2;SSA1 Heat shock protein SSA2;Heat shock protein SSA1 yes no 2 0.0024239 138.25 1 736190 736190 296 19 296 380 416 416 1 VDVLDPALLR FSSDDRVKVLAATNRVDVLDPALLRSGRLD AATNRVDVLDPALLRSGRLDRKIEFPLPSE R V D L R S 1 1 0 2 0 0 0 0 0 0 3 0 0 0 1 0 0 0 0 2 0 0 10 0 1109.6445 P33297 P33297 330 339 RPT5 26S protease regulatory subunit 6A yes yes 2 0.0044552 131.62 1 6117500 6117500 297 32 297 381 417 417 1 VEFSLPDLEGR TLDPALLRPGRIDRKVEFSLPDLEGRANIF IDRKVEFSLPDLEGRANIFRIHSKSMSVER K V E G R A 0 1 0 1 0 0 2 1 0 0 2 0 0 1 1 1 0 0 0 1 0 0 11 0 1260.635 P33299 P33299 375 385 RPT1 26S protease regulatory subunit 7 homolog yes yes 2 0.0004798 151.83 1 454450 454450 298 34 298 382 418 418 1 VEGSGGGDSEVQR SIIFMDEIDSIGSTRVEGSGGGDSEVQRTM TRVEGSGGGDSEVQRTMLELLNQLDGFETS R V E Q R T 0 1 0 1 0 1 2 4 0 0 0 0 0 0 0 2 0 0 0 2 0 0 13 0 1275.5691 Q01939 Q01939 258 270 RPT6 26S protease regulatory subunit 8 homolog yes yes 1;2;3 1.0663E-09 221.32 3 329510000 329510000 299 47 299 383;384;385 419;420;421;422;423;424 419 6 VEQSLNLEK ATEAMKRDYESAKKKVEQSLNLEKTVPEQS ESAKKKVEQSLNLEKTVPEQSRDADVDASQ K V E E K T 0 0 1 0 0 1 2 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 9 0 1058.5608 Q12118 Q12118 219 227 SGT2 Small glutamine-rich tetratricopeptide repeat-containing protein 2 yes yes 2 0.0074246 128.91 1 1659700 1659700 300 56 300 386 425 425 1 VFDTLTR PLAMGIVSVSDPQMKVFDTLTRFSHDADLE SVSDPQMKVFDTLTRFSHDADLEVSMNSIF K V F T R F 0 1 0 1 0 0 0 0 0 0 1 0 0 1 0 0 2 0 0 1 0 0 7 0 850.45487 P38764 P38764 792 798 RPN1 26S proteasome regulatory subunit RPN1 yes yes 2 0.011096 140.98 1 2085600 2085600 301 36 301 387 426 426 1 VGGASEVEVGEK QERLAKLSGGVAVIRVGGASEVEVGEKKDR VIRVGGASEVEVGEKKDRYDDALNATRAAV R V G E K K 1 0 0 0 0 0 3 3 0 0 0 1 0 0 0 1 0 0 0 3 0 0 12 0 1159.5721 P19882 P19882 403 414 HSP60 Heat shock protein 60, mitochondrial yes yes 2 4.3932E-05 158.47 1 573920 573920 302 24 302 388 427 427 1 VGQAVETVGQAGR LALNDEGEPIKVNVRVGQAVETVGQAGRPK VRVGQAVETVGQAGRPKKITGWITQSTPVL R V G G R P 2 1 0 0 0 2 1 3 0 0 0 0 0 0 0 0 1 0 0 3 0 0 13 0 1270.663 P38764 P38764 929 941 RPN1 26S proteasome regulatory subunit RPN1 yes yes 2 4.0137E-14 258.01 1 3993100 3993100 303 36 303 389 428 428 1 VIGSELVQK CARAVANRTDATFIRVIGSELVQKYVGEGA DATFIRVIGSELVQKYVGEGARMVRELFEM R V I Q K Y 0 0 0 0 0 1 1 1 0 1 1 1 0 0 0 1 0 0 0 2 0 0 9 0 971.56515 P33299 P33299 274 282 RPT1 26S protease regulatory subunit 7 homolog yes yes 2 0.0049602 139.97 1 8058000 8058000 304 34 304 390 429 429 1 VLAATNR LLNQLDGFSSDDRVKVLAATNRVDVLDPAL FSSDDRVKVLAATNRVDVLDPALLRSGRLD K V L N R V 2 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 7 0 743.42899 P33297 P33297 323 329 RPT5 26S protease regulatory subunit 6A yes yes 2 0.019864 115.46 1 1753900 1753900 305 32 305 391 430 430 1 VLDELTLAR NLRMSVEADINGLRRVLDELTLARADLEMQ INGLRRVLDELTLARADLEMQIESLKEELA R V L A R A 1 1 0 1 0 0 1 0 0 0 3 0 0 0 0 0 1 0 0 1 0 0 9 0 1028.5866 CON__P08779;CON__P19012;CON__A2A4G1;CON__P08727;CON__P19001;CON__P02533;CON__Q04695;CON__Q9QWL7;CON__Q6IFX2 CON__P02533 224 232 no no 2 8.0521E-05 209.84 1 1429500 1429500 + 306 5;1 306 392 431 431 1 VLDELTLTK ALRQSVEADINGLRRVLDELTLTKADLEMQ INGLRRVLDELTLTKADLEMQIESLTEELA R V L T K A 0 0 0 1 0 0 1 0 0 0 3 1 0 0 0 0 2 0 0 1 0 0 9 0 1030.591 CON__P13645 CON__P13645 258 266 yes yes 2 0.00012359 199.7 1 5987700 5987700 + 307 6 307 393 432 432 1 VLDIEGDNATEAMK YAQGKPEEALEAYKKVLDIEGDNATEAMKR KVLDIEGDNATEAMKRDYESAKKKVEQSLN K V L M K R 2 0 1 2 0 0 2 1 0 1 1 1 1 0 0 0 1 0 0 1 0 0 14 0 1504.7079 Q12118 Q12118 196 209 SGT2 Small glutamine-rich tetratricopeptide repeat-containing protein 2 yes yes 2 5.9751E-19 269.44 1 1558300 1558300 308 56 308 394 433 433 1 VLGIDAGEEK LGSLAVQYATAMGYRVLGIDAGEEKEKLFK AMGYRVLGIDAGEEKEKLFKKLGGEVFIDF R V L E K E 1 0 0 1 0 0 2 2 0 1 1 1 0 0 0 0 0 0 0 1 0 0 10 0 1029.5342 P07246 P07246 225 234 ADH3 Alcohol dehydrogenase 3, mitochondrial yes yes 2 0.0059103 123.86 1 860690 860690 309 16 309 395 434 434 1 VLNEISK EKKYAEEDQVQELLKVLNEISKTTLTLDPR DQVQELLKVLNEISKTTLTLDPRYIWRSLK K V L S K T 0 0 1 0 0 0 1 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 7 0 801.45962 P40016 P40016 37 43 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 0.0064548 161.9 1 6852200 6852200 310 38 310 396 435 435 1 VLPTNAIYYANR KDYELAINKYTEAIKVLPTNAIYYANRAAA AIKVLPTNAIYYANRAAAHSSLKEYDQAVK K V L N R A 2 1 2 0 0 0 0 0 0 1 1 0 0 0 1 0 1 0 2 1 0 0 12 0 1393.7354 Q12118 Q12118 131 142 SGT2 Small glutamine-rich tetratricopeptide repeat-containing protein 2 yes yes 2 0.0015886 139.38 1 5183000 5183000 311 56 311 397 436 436 1 VNGIVETNRPDNK GKFIPNKQLNCVIDRVNGIVETNRPDNKNA DRVNGIVETNRPDNKNAQYHLLVKQGDGLL R V N N K N 0 1 3 1 0 0 1 1 0 1 0 1 0 0 1 0 1 0 0 2 0 0 13 1 1454.7478 Q06103 Q06103 384 396 RPN7 26S proteasome regulatory subunit RPN7 yes yes 2;3 6.1973E-10 223.77 2 11722000 11722000 312 50 312 398;399 437;438 438 2 VPDQIRDYASSITR DEKEIDVILDDMIEKVPDQIRDYASSITRK KVPDQIRDYASSITRKVNLCMPSKNGDEWT K V P T R K 1 2 0 2 0 1 0 0 0 2 0 0 0 0 1 2 1 0 1 1 0 0 14 1 1619.8267 P12954 P12954 139 152 SRS2 ATP-dependent DNA helicase SRS2 yes yes 2 0.033989 66.19 1 0 0 313 22 313 400 439 439 0 0 VPDSTYDMVGGLTK ENKADPLVSLMMVEKVPDSTYDMVGGLTKQ KVPDSTYDMVGGLTKQIKEIKEVIELPVKH K V P T K Q 0 0 0 2 0 0 0 2 0 0 1 1 1 0 1 1 2 0 1 2 0 0 14 0 1481.7072 Q01939 Q01939 142 155 RPT6 26S protease regulatory subunit 8 homolog yes yes 2 3.3873E-06 209.19 1 120060000 120060000 314 47 314 401 440 440 1 VPEDIYK HFLYLAKELNLTGPKVPEDIYKSHLDNSKS ELNLTGPKVPEDIYKSHLDNSKSVFSSAGL K V P Y K S 0 0 0 1 0 0 1 0 0 1 0 1 0 0 1 0 0 0 1 1 0 0 7 0 862.44363 P38764 P38764 353 359 RPN1 26S proteasome regulatory subunit RPN1 yes yes 2 0.036529 60.799 1 2810700 2810700 315 36 315 402 441 441 0 VPQVSTPTLVEVSR EYGFQNALIVRYTRKVPQVSTPTLVEVSRS KVPQVSTPTLVEVSRSLGKVGTRCCTKPES K V P S R S 0 1 0 0 0 1 1 0 0 0 1 0 0 0 2 2 2 0 0 4 0 0 14 0 1510.8355 CON__P02769;CON__P02768-1 CON__P02769 438 451 yes no 2 2.5865E-09 201.38 1 1210200 1210200 + 316 3 316 403 442 442 1 VQALEEANNDLENK TMQELNSRLASYLDKVQALEEANNDLENKI KVQALEEANNDLENKIQDWYDKKGPAAIQK K V Q N K I 2 0 3 1 0 1 3 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 14 0 1585.7584 CON__P35527 CON__P35527 171 184 yes yes 2 6.2833E-27 336.33 1 3220900 3220900 + 317 9 317 404 443 443 1 VRAEEREQIK LLTPLNLQIDPTIQRVRAEEREQIKTLNNK PTIQRVRAEEREQIKTLNNKFASFIDKVRF R V R I K T 1 2 0 0 0 1 3 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 10 2 1256.6837 CON__P02538;CON__P48668;CON__P04259;CON__O95678 CON__P02538 159 168 yes no 3 0.03329 102.62 1 0 0 + 318 2 318 405 444 444 1 VSDDSESESGDKEATAPLIQR NKKIQEQRVKDKQSKVSDDSESESGDKEAT SESGDKEATAPLIQRKNKKN__________ K V S Q R K 2 1 0 3 0 1 3 1 0 1 1 1 0 0 1 4 1 0 0 1 0 0 21 1 2233.0346 Q08723 Q08723 313 333 RPN8 26S proteasome regulatory subunit RPN8 yes yes 3 6.485E-07 165.16 2 8215300 8215300 319 53 319;320 406;407 445;446 445 2 1 VSGAELVQK LARAVAHHTDCKFIRVSGAELVQKYIGEGS DCKFIRVSGAELVQKYIGEGSRMVRELFVM R V S Q K Y 1 0 0 0 0 1 1 1 0 0 1 1 0 0 0 1 0 0 0 2 0 0 9 0 929.5182 Q01939 Q01939 213 221 RPT6 26S protease regulatory subunit 8 homolog yes yes 2 0.00072205 190.73 4 1728000 1728000 320 47 321 408;409;410;411 447;448;449;450 448 4 VSPTDIEEGMR NLKQIAKFVVGLGERVSPTDIEEGMRVGVD LGERVSPTDIEEGMRVGVDRSKYNIELPLP R V S M R V 0 1 0 1 0 0 2 1 0 1 0 0 1 0 1 1 1 0 0 1 0 0 11 0 1232.5707 P33299 P33299 163 173 RPT1 26S protease regulatory subunit 7 homolog yes yes 2 0.016142 110.38 1 1161900 1161900 321 34 322 412 451 451 1 VTEKTNALYAIKR ILYANDQLKIRLIEKVTEKTNALYAIKRTD EKVTEKTNALYAIKRTDGAEALQRLLQWQL K V T K R T 2 1 1 0 0 0 1 0 0 1 1 2 0 0 0 0 2 0 1 1 0 0 13 2 1505.8566 Q07527 Q07527 986 998 TRM3 tRNA (guanosine(18)-2-O)-methyltransferase yes yes 3 0.019601 69.864 1 0 0 322 52 323 413 452 452 7 0 VTMQNLNDR GGFGGDGGLLSGNEKVTMQNLNDRLASYLD LSGNEKVTMQNLNDRLASYLDKVRALEESN K V T D R L 0 1 2 1 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 9 0 1089.5237 CON__P08779;CON__A2A4G1;CON__Q9Z2K1;CON__Q3ZAW8;CON__Q7Z3Y9;CON__P02533;CON__P13645;CON__P02535-1;CON__Q148H6;CON__Q7Z3Y7;CON__Q7Z3Z0;CON__Q7Z3Y8 CON__P13645 148 156 no no 2 0.0001624 191.45 1 6279400 6279400 + 323 6;5;1 324 414 453 453 1 VTNSFALPFEEDEK CVGVILGDANSSTIRVTNSFALPFEEDEKN RVTNSFALPFEEDEKNSDVWFLDHNYIENM R V T E K N 1 0 1 1 0 0 3 0 0 0 1 1 0 2 1 1 1 0 0 1 0 0 14 0 1624.7621 Q08723 Q08723 48 61 RPN8 26S proteasome regulatory subunit RPN8 yes yes 2 0.011991 132.86 1 1638900 1638900 324 53 325 415 454 454 0 VTPSFVAFTPEER YESSVEIIANEQGNRVTPSFVAFTPEERLI NRVTPSFVAFTPEERLIGDAAKNQAALNPR R V T E R L 1 1 0 0 0 0 2 0 0 0 0 0 0 2 2 1 2 0 0 2 0 0 13 0 1478.7405 P11484 P11484 39 51 SSB1 Heat shock protein SSB1 yes yes 2 0.00088449 143.5 1 206860 206860 325 20 326 416 455 455 1 VVGLSTLPEIYEK ALDFFARGLVKSPIKVVGLSTLPEIYEKME IKVVGLSTLPEIYEKMEKGQIVGRYVVDTS K V V E K M 0 0 0 0 0 0 2 1 0 1 2 1 0 0 1 1 1 0 1 2 0 0 13 0 1446.797 P00330 P00330 320 332 ADH1 Alcohol dehydrogenase 1 yes yes 2 4.7888E-06 181.53 1 645760 645760 326 12 327 417 456 456 1 VVNEPTAAALAYGLEK ATKDAGQIVGLNVLRVVNEPTAAALAYGLE VNEPTAAALAYGLEKSDSKVVAVFDLGGGT R V V E K S 4 0 1 0 0 0 2 1 0 0 2 1 0 0 1 0 1 0 1 2 0 0 16 0 1644.8723 P0CS90 P0CS90 196 211 SSC1 Heat shock protein SSC1, mitochondrial yes yes 2 1.3451E-10 204.17 1 577810 577810 327 18 328 418 457 457 1 VYAQLLESYK LNRHADFFVREMRRKVYAQLLESYKTLSLK EMRRKVYAQLLESYKTLSLKSMASAFGVSV K V Y Y K T 1 0 0 0 0 1 1 0 0 0 2 1 0 0 0 1 0 0 2 1 0 0 10 0 1212.639 Q06103 Q06103 337 346 RPN7 26S proteasome regulatory subunit RPN7 yes yes 2 1.962E-06 199.89 1 24145000 24145000 328 50 329 419 458 458 1 WELLQQVDTSTR KVRFLEQQNQVLQTKWELLQQVDTSTRTHN QTKWELLQQVDTSTRTHNLEPYFESFINNL K W E T R T 0 1 0 1 0 2 1 0 0 0 2 0 0 0 0 1 2 1 0 1 0 0 12 0 1474.7416 CON__P04264 CON__P04264 212 223 yes yes 2 1.2706E-21 307.97 1 3373900 3373900 + 329 4 330 420 459 459 1 WTLLQEQGTK KVRFLEQQNKVLDTKWTLLQEQGTKTVRQN VLDTKWTLLQEQGTKTVRQNLEPLFEQYIN K W T T K T 0 0 0 0 0 2 1 1 0 0 2 1 0 0 0 0 2 1 0 0 0 0 10 0 1202.6295 CON__P02538;CON__P48668;CON__P04259;CON__P13647 CON__P13647 200 209 no no 2 3.3066E-07 223.87 1 3611100 3611100 + 330 2;7 331 421 460 460 1 YAEEDQVQELLK VDSSGVNDLHHSEKKYAEEDQVQELLKVLN EKKYAEEDQVQELLKVLNEISKTTLTLDPR K Y A L K V 1 0 0 1 0 2 3 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 12 0 1463.7144 P40016 P40016 25 36 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 2.5138E-15 289.67 1 5728500 5728500 331 38 332 422 461 461 1 YAQGKPEEALEAYK DPSYFRGYSRLGFAKYAQGKPEEALEAYKK KYAQGKPEEALEAYKKVLDIEGDNATEAMK K Y A Y K K 3 0 0 0 0 1 3 1 0 0 1 2 0 0 1 0 0 0 2 0 0 0 14 1 1595.7831 Q12118 Q12118 181 194 SGT2 Small glutamine-rich tetratricopeptide repeat-containing protein 2 yes yes 2;3 0.0047036 121.92 2 2477300 2477300 332 56 333 423;424 462;463 463 2 YAQGKPEEALEAYKK DPSYFRGYSRLGFAKYAQGKPEEALEAYKK YAQGKPEEALEAYKKVLDIEGDNATEAMKR K Y A K K V 3 0 0 0 0 1 3 1 0 0 1 3 0 0 1 0 0 0 2 0 0 0 15 2 1723.8781 Q12118 Q12118 181 195 SGT2 Small glutamine-rich tetratricopeptide repeat-containing protein 2 yes yes 3 0.00026914 141.82 1 2247100 2247100 333 56 334 425 464;465 465 2 YEDEINKR ELKNMQDMVEDYRNKYEDEINKRTNAENEF VEDYRNKYEDEINKRTNAENEFVTIKKDVD K Y E K R T 0 1 1 1 0 0 2 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 8 1 1065.5091 CON__P04264;CON__H-INV:HIT000016045;CON__P35908v2;CON__P35908;CON__Q3TTY5;CON__P12035;CON__Q01546;CON__P02538;CON__P48668;CON__P04259;CON__O95678;CON__Q8VED5;CON__P13647 CON__P04264 270 277 no no 2 0.0006355 176.41 1 739250 739250 + 334 4;10;2;7 335 426 466 466 1 YEELQQTAGR ANRSRTEAESWYQTKYEELQQTAGRHGDDL WYQTKYEELQQTAGRHGDDLRNTKHEISEM K Y E G R H 1 1 0 0 0 2 2 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1193.5677 CON__P13647 CON__P13647 365 374 no no 2 0.00042427 153.1 1 2657100 2657100 + 335 7 336 427 467;468 468 2 YEELQVTAGR AQRSRAEAESWYQTKYEELQVTAGRHGDDL WYQTKYEELQVTAGRHGDDLRNTKQEIAEI K Y E G R H 1 1 0 0 0 1 2 1 0 0 1 0 0 0 0 0 1 0 1 1 0 0 10 0 1164.5775 CON__P02538;CON__P48668;CON__P04259;CON__O95678 CON__P02538 360 369 no no 2 1.5348E-05 188.91 1 1134100 1134100 + 336 2 337 428 469 469 1 YENEVALR QIDNARLAADDFRLKYENEVALRQSVEADI ADDFRLKYENEVALRQSVEADINGLRRVLD K Y E L R Q 1 1 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 8 0 992.49271 CON__P13645 CON__P13645 238 245 yes yes 2 0.003718 157.91 1 1705100 1705100 + 337 6 338 429 470 470 1 YFFYLSK LEYPHTDVSSSLEARYFFYLSKINAIQLDY VSSSLEARYFFYLSKINAIQLDYSTANEYI R Y F S K I 0 0 0 0 0 0 0 0 0 0 1 1 0 2 0 1 0 0 2 0 0 0 7 0 966.48511 P40016 P40016 272 278 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 0.014353 128.48 1 1953400 1953400 338 38 339 430 471 471 1 YISFIKDDR YKVDNMTRILPQQSRYISFIKDDRFVPVRK LPQQSRYISFIKDDRFVPVRKFKGNNGVVV R Y I D R F 0 1 0 2 0 0 0 0 0 2 0 1 0 1 0 1 0 0 1 0 0 0 9 1 1155.5924 P32565 P32565 881 889 RPN2 26S proteasome regulatory subunit RPN2 yes yes 3 0.034983 54.416 1 0 0 339 31 340 431 472 472 1 YIVDVAK VSDKKVLVKVQPEGKYIVDVAKDINVKDLK VKVQPEGKYIVDVAKDINVKDLKASQRVCL K Y I A K D 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 2 0 0 7 0 806.4538 Q01939 Q01939 94 100 RPT6 26S protease regulatory subunit 8 homolog yes yes 1 0.033198 48.174 1 85883000 85883000 340 47 341 432 473 473 0 YLDGLTAER NLEPIFQGYIDSLKRYLDGLTAERTSQNSE IDSLKRYLDGLTAERTSQNSELNNMQDLVE R Y L E R T 1 1 0 1 0 0 1 1 0 0 2 0 0 0 0 0 1 0 1 0 0 0 9 0 1036.5189 CON__P35908v2;CON__P35908 CON__P35908v2 239 247 yes no 2 0.0035659 146.23 1 1169400 1169400 + 341 10 342 433 474 474 1 YLLASLK VSKFYDKINQLSVVKYLLASLKDSKDFDES INQLSVVKYLLASLKDSKDFDESLKYLDDL K Y L L K D 1 0 0 0 0 0 0 0 0 0 3 1 0 0 0 1 0 0 1 0 0 0 7 0 806.49019 Q04062 Q04062 81 87 RPN9 26S proteasome regulatory subunit RPN9 yes yes 2 0.034821 105.2 1 1021300 1021300 342 49 343 434 475 475 1 YLYEIAR LCDEFKADEKKFWGKYLYEIARRHPYFYAP DEKKFWGKYLYEIARRHPYFYAPELLYYAN K Y L A R R 1 1 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 2 0 0 0 7 0 926.48617 CON__P02769;CON__P02768-1 CON__P02769 161 167 yes no 2 0.0269 110.63 1 6945600 6945600 + 343 3 344 435 476 476 1 YTQNNPLLLIVDVK KLRASDLKINELFKKYTQNNPLLLIVDVKQ KYTQNNPLLLIVDVKQQGVGLPTDAYVAIE K Y T V K Q 0 0 2 1 0 1 0 0 0 1 3 1 0 0 1 0 1 0 1 2 0 0 14 0 1628.9138 Q08723 Q08723 113 126 RPN8 26S proteasome regulatory subunit RPN8 yes yes 2 1.1026E-05 159.5 1 689240 689240 344 53 345 436 477;478 478 2 YTVSFIEGDGIGPEISK SIGRYTGKPNPSTGKYTVSFIEGDGIGPEI VSFIEGDGIGPEISKSVKKIFSAANVPIEW K Y T S K S 0 0 0 1 0 0 2 3 0 3 0 1 0 1 1 2 1 0 1 1 0 0 17 0 1810.8989 P28241 P28241 37 53 IDH2 Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial yes yes 2 0.016064 87.713 1 0 0 345 28 346 437 479 479 1 0