Sequence N-term cleavage window C-term cleavage window Amino acid before First amino acid Second amino acid Second last amino acid Last amino acid Amino acid after A Count R Count N Count D Count C Count Q Count E Count G Count H Count I Count L Count K Count M Count F Count P Count S Count T Count W Count Y Count V Count U Count O Count Length Missed cleavages Mass Proteins Leading razor protein Start position End position Gene names Protein names Unique (Groups) Unique (Proteins) Charges PEP Score Experiment 191220_hirano_10_1 Intensity Intensity 191220_hirano_10_1 Reverse Potential contaminant id Protein group IDs Mod. peptide IDs Evidence IDs MS/MS IDs Best MS/MS Phospho (ST) site IDs Phospho (STY) site IDs MS/MS Count AAVEEGILPGGGTALVK GEKKDRYDDALNATRAAVEEGILPGGGTAL VEEGILPGGGTALVKASRVLDEVVVDNFDQ R A A V K A 3 0 0 0 0 0 2 4 0 1 2 1 0 0 1 0 1 0 0 2 0 0 17 0 1580.8774 P19882 P19882 427 443 HSP60 Heat shock protein 60, mitochondrial yes yes 2 0.023376 99.732 1 3296900 3296900 0 25 0 0 0 0 0 ACAAQTNATFLK LMYGPPGTGKTLLARACAAQTNATFLKLAA LARACAAQTNATFLKLAAPQLVQMYIGEGA R A C L K L 4 0 1 0 1 1 0 0 0 0 1 1 0 1 0 0 2 0 0 0 0 0 12 0 1237.6125 P33297 P33297 234 245 RPT5 26S protease regulatory subunit 6A yes yes 2 1.9855E-10 252.14 1 27848000 27848000 1 31 1 1 1 1 1 ADKDYSQILK ______________________________ DAPIKADKDYSQILKEEFPKIDSLAQNDCN K A D L K E 1 0 0 2 0 1 0 0 0 1 1 2 0 0 0 1 0 0 1 0 0 0 10 1 1179.6136 Q12250 Q12250 9 18 RPN5 26S proteasome regulatory subunit RPN5 yes yes 2;3 0.00036287 192.26 2 28322000 28322000 2 57 2 2;3 2;3 3 2 ADKDYSQILKEEFPK ______________________________ ADKDYSQILKEEFPKIDSLAQNDCNSALDQ K A D P K I 1 0 0 2 0 1 2 0 0 1 1 3 0 1 1 1 0 0 1 0 0 0 15 2 1809.9149 Q12250 Q12250 9 23 RPN5 26S proteasome regulatory subunit RPN5 yes yes 3 0.00082008 147.75 1 3879700 3879700 3 57 3 4 4 4 1 AEAESLYQSK AEVKAQNEDIAQKSKAEAESLYQSKYEELQ AQKSKAEAESLYQSKYEELQITAGRHGDSV K A E S K Y 2 0 0 0 0 1 2 0 0 0 1 1 0 0 0 2 0 0 1 0 0 0 10 0 1124.535 CON__P04264 CON__P04264 367 376 yes yes 2 2.6634E-10 254.83 1 33219000 33219000 + 4 8 4 5 5 5 1 AEFVEVTK LKAWSVARLSQKFPKAEFVEVTKLVTDLTK LSQKFPKAEFVEVTKLVTDLTKVHKECCHG K A E T K L 1 0 0 0 0 0 2 0 0 0 0 1 0 1 0 0 1 0 0 2 0 0 8 0 921.48075 CON__P02769 CON__P02769 249 256 yes yes 2 0.00022118 176.09 1 212340000 212340000 + 5 7 5 6 6 6 1 AIGGGLSSVGGGSSTIK SGLGVGGGFSSSSGRAIGGGLSSVGGGSST GGGLSSVGGGSSTIKYTTTSSSSRKSYKH_ R A I I K Y 1 0 0 0 0 0 0 6 0 2 1 1 0 0 0 4 1 0 0 1 0 0 17 0 1446.7678 CON__P02538;CON__P48668 CON__P02538 534 550 yes no 2 4.4628E-17 276.41 1 11406000 11406000 + 6 4 6 7 7 7 1 ALEEANADLEVK QNLNDRLASYLDKVRALEEANADLEVKIRD KVRALEEANADLEVKIRDWYQRQRPSEIKD R A L V K I 3 0 1 1 0 0 3 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 12 0 1300.6511 CON__P02533;CON__Q6IFX2;CON__P19012;CON__ENSEMBL:ENSP00000377550;CON__P13646-1;CON__P08779 CON__P08779 137 148 no no 2 5.5981E-11 261.35 1 9889000 9889000 + 7 3;9 7 8 8 8 1 ALEESNYELEGK QNLNDRLASYLDKVRALEESNYELEGKIKE KVRALEESNYELEGKIKEWYEKHGNSHQGE R A L G K I 1 0 1 0 0 0 4 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 12 0 1380.6409 CON__P13645;CON__P02535-1 CON__P13645 166 177 yes no 2 0.00031832 174.57 1 24788000 24788000 + 8 10 8 9 9 9 1 ALKMSLFEYEK MSTQADNSDDEELQKALKMSLFEYEKQKKL ELQKALKMSLFEYEKQKKLQEQEKESAEVL K A L E K Q 1 0 0 0 0 0 2 0 0 0 2 2 1 1 0 1 0 0 1 0 0 0 11 1 1357.6952 P38753 P38753 170 180 HSE1 Class E vacuolar protein-sorting machinery protein HSE1 yes yes 2 0.0098126 87.639 1 0 0 9 36 9 10 10 10 5 0 ALQSIGQLIGEVMK RDLEKLYDKTENDIKALQSIGQLIGEVMKE KALQSIGQLIGEVMKELSEEKYIVKASSGP K A L M K E 1 0 0 0 0 2 1 2 0 2 2 1 1 0 0 1 0 0 0 1 0 0 14 0 1485.8225 P53549 P53549 97 110 RPT4 26S protease subunit RPT4 yes yes 2 1.5623E-07 249.98 2 20822000 20822000 10 49 10 11;12 11;12 12 2 AMEVDEKPTETYSDVGGLDK LILDTLPSEFDSRVKAMEVDEKPTETYSDV EKPTETYSDVGGLDKQIEELVEAIVLPMKR K A M D K Q 1 0 0 3 0 0 3 2 0 0 1 2 1 0 1 1 2 0 1 2 0 0 20 1 2182.994 P33297 P33297 169 188 RPT5 26S protease regulatory subunit 6A yes yes 2;3 9.7101E-12 235.78 3 1930400000 1930400000 11 31 11 13;14;15 13;14;15;16 14 4 APGILPR KGPIDAAGRSRAQVKAPGILPRRSVHEPVQ GRSRAQVKAPGILPRRSVHEPVQTGLKAVD K A P P R R 1 1 0 0 0 0 0 1 0 1 1 0 0 0 2 0 0 0 0 0 0 0 7 0 722.44391 P07251 P07251 170 176 ATP1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.014103 109.88 1 2463800 2463800 12 20 12 16 17 17 1 APTIIFIDELDAIGTK GAKLVRDAFALAKEKAPTIIFIDELDAIGT PTIIFIDELDAIGTKRFDSEKSGDREVQRT K A P T K R 2 0 0 2 0 0 1 1 0 4 1 1 0 1 1 0 2 0 0 0 0 0 16 0 1715.9346 P33297 P33297 274 289 RPT5 26S protease regulatory subunit 6A yes yes 2;3 2.3859E-11 260.5 3 19049000 19049000 13 31 13 17;18;19 18;19;20 20 3 AQEEEVELSSDALDLLTK KSYNEQEIKTILSIRAQEEEVELSSDALDL EEVELSSDALDLLTKTGVETSLRYSSNLIS R A Q T K T 2 0 0 2 0 1 4 0 0 0 4 1 0 0 0 2 1 0 0 1 0 0 18 0 1988.979 Q12464 Q12464 372 389 RVB2 RuvB-like protein 2 yes yes 2 8.0081E-18 296.27 1 309180 309180 14 60 14 20 21 21 1 AQILQIHSR LDRKIEFPLPSEDSRAQILQIHSRKMTTDD PSEDSRAQILQIHSRKMTTDDDINWQELAR R A Q S R K 1 1 0 0 0 2 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 0 9 0 1064.6091 P33297 P33297 358 366 RPT5 26S protease regulatory subunit 6A yes yes 2;3 3.9303E-06 185.72 4 2748000000 2748000000 15 31 15 21;22;23;24 22;23;24;25 23 2 AQPTEVSSILEER AAAALASTRRLASTKAQPTEVSSILEERIK TKAQPTEVSSILEERIKGVSDEANLNETGR K A Q E R I 1 1 0 0 0 1 3 0 0 1 1 0 0 0 1 2 1 0 0 1 0 0 13 0 1457.7362 P07251 P07251 40 52 ATP1 ATP synthase subunit alpha, mitochondrial yes yes 2 3.0487E-06 196.02 1 13059000 13059000 16 20 16 25 26 26 1 AQYEEIANR NNRNLDLDSIIAEVKAQYEEIANRSRTEAE IIAEVKAQYEEIANRSRTEAESWYQTKYEE K A Q N R S 2 1 1 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 9 0 1092.52 CON__P13647 CON__P13647 344 352 yes yes 2 0.00017314 181.55 1 10709000 10709000 + 17 11 17 26 27 27 1 AQYEEIAQR NSRNLDLDSIIAEVKAQYEEIAQRSKEEAE IIAEVKAQYEEIAQRSKEEAEALYHSKYEE K A Q Q R S 2 1 0 0 0 2 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 9 0 1106.5356 CON__P02538;CON__P48668;CON__P04259;CON__P19013;CON__P35908v2;CON__P35908 CON__P35908v2 354 362 no no 2 3.8867E-06 200.86 1 23483000 23483000 + 18 13;4 18 27 28 28 1 ASLENSLEETK LQGLEIELQSQLSMKASLENSLEETKGRYC LSMKASLENSLEETKGRYCMQLSQIQGLIG K A S T K G 1 0 1 0 0 0 3 0 0 0 2 1 0 0 0 2 1 0 0 0 0 0 11 0 1219.5932 CON__P02533;CON__P08779;CON__Q9Z2K1;CON__Q3ZAW8 CON__P08779 355 365 no no 2 2.0599E-15 270.36 1 8410300 8410300 + 19 3;9 19 28 29 29 1 ATLEELDAQTLPGDDELDQEILNLSTQELQTR ______________________________ DQEILNLSTQELQTRAKLLDNEIRIFRSEL M A T T R A 2 1 1 4 0 4 5 1 0 1 7 0 0 0 1 1 4 0 0 0 0 0 32 0 3597.7534 P33297 P33297 2 33 RPT5 26S protease regulatory subunit 6A yes yes 3 0.020036 61.436 1 0 0 20 31 20 29 30;31 31 19 0 ATTSFVESVAAGKSKIEK KLWDDLKLEVSSRDKATTSFVESVAAGKSK SFVESVAAGKSKIEKEFNESMETFKKLGLL K A T E K E 3 0 0 0 0 0 2 1 0 1 0 3 0 1 0 3 2 0 0 2 0 0 18 2 1851.9942 Q99287 Q99287 403 420 SEY1 Protein SEY1 yes yes 3 0.022284 67.415 1 0 0 21 63 21 30 32 32 14;15;31;32 0 AVAATIGANFIFSPASGIVDK LLYGPPGTGKTLLAKAVAATIGANFIFSPA GANFIFSPASGIVDKYIGESARIIREMFAY K A V D K Y 5 0 1 1 0 0 0 2 0 3 0 1 0 2 1 2 1 0 0 2 0 0 21 0 2048.0942 P53549 P53549 234 254 RPT4 26S protease subunit RPT4 yes yes 2;3 5.5004E-20 298.7 2 2316900 2316900 22 49 22 31;32 33;34;35 34 2 AVAEAYNNR YTKETYQSRGIDAMKAVAEAYNNRSLLDFN GIDAMKAVAEAYNNRSLLDFNTALKQYEKE K A V N R S 3 1 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 9 0 1006.4832 Q12377 Q12377 301 309 RPN6 26S proteasome regulatory subunit RPN6 yes yes 2 4.6302E-06 195.81 1 4212500 4212500 23 58 23 33 36 36 1 AVANQTSATFLR ILYGAPGTGKTLLAKAVANQTSATFLRIVG LAKAVANQTSATFLRIVGSELIQKYLGDGP K A V L R I 3 1 1 0 0 1 0 0 0 0 1 0 0 1 0 1 2 0 0 1 0 0 12 0 1277.6728 P40327 P40327 235 246 RPT2 26S protease regulatory subunit 4 homolog yes yes 2 2.6121E-10 248.09 1 63557000 63557000 24 40 24 34 37 37 1 AVDALVPIGR LPRRSVHEPVQTGLKAVDALVPIGRGQREL QTGLKAVDALVPIGRGQRELIIGDRQTGKT K A V G R G 2 1 0 1 0 0 0 1 0 1 1 0 0 0 1 0 0 0 0 2 0 0 10 0 1009.592 P07251 P07251 189 198 ATP1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.0091751 112.84 1 5813400 5813400 25 20 25 35 38 38 1 AVEEKPAVK ______________________________ VTPVEKAVEEKPAVKSYASLLAQLNGTVNN K A V V K S 2 0 0 0 0 0 2 0 0 0 0 2 0 0 1 0 0 0 0 2 0 0 9 1 969.5495 P33298 P33298 13 21 RPT3 26S protease regulatory subunit 6B homolog yes yes 2 4.4703E-05 186.76 1 265760000 265760000 26 32 26 36 39 39 1 AVTVEAGMIALR ELARSTDEFNGAQLKAVTVEAGMIALRNGQ QLKAVTVEAGMIALRNGQSSVKHEDFVEGI K A V L R N 3 1 0 0 0 0 1 1 0 1 1 0 1 0 0 0 1 0 0 2 0 0 12 0 1229.6802 P33297 P33297 393 404 RPT5 26S protease regulatory subunit 6A yes yes 2;3 1.5214E-07 225.87 2 204260000 204260000 27 31 27 37;38 40;41 40 2 AYLLFLDSAR MKRKNNTVEVEDVKRAYLLFLDSARSVKYV EDVKRAYLLFLDSARSVKYVQENESQYIDD R A Y A R S 2 1 0 1 0 0 0 0 0 0 3 0 0 1 0 1 0 0 1 0 0 0 10 0 1167.6288 Q12464 Q12464 426 435 RVB2 RuvB-like protein 2 yes yes 2 0.00075143 158.87 1 879000 879000 28 60 28 39 42 42 1 DAEAWFNEK NMRSQYEQLAEQNRKDAEAWFNEKSKELTT AEQNRKDAEAWFNEKSKELTTEIDNNIEQI K D A E K S 2 0 1 1 0 0 2 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 9 0 1108.4825 CON__P13645;CON__Q7Z3Z0;CON__Q7Z3Y8;CON__Q148H6;CON__Q7Z3Y7 CON__P13645 335 343 yes no 2 0.018199 102.62 1 8849400 8849400 + 29 10 29 40 43 43 0 DAETWFLSK EMRDQYEQMAEKNRRDAETWFLSKTEELNK AEKNRRDAETWFLSKTEELNKEVASNSELV R D A S K T 1 0 0 1 0 0 1 0 0 0 1 1 0 1 0 1 1 1 0 0 0 0 9 0 1095.5237 CON__P08779 CON__P08779 303 311 yes yes 2 3.2235E-06 205.36 1 947690 947690 + 30 9 30 41 44 44 1 DAFALAK QLVQMYIGEGAKLVRDAFALAKEKAPTIIF GEGAKLVRDAFALAKEKAPTIIFIDELDAI R D A A K E 3 0 0 1 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 7 0 734.39629 P33297 P33297 265 271 RPT5 26S protease regulatory subunit 6A yes yes 2 0.0061429 124.89 1 4871300 4871300 31 31 31 42 45 45 1 DAFLGSFLYEYSR FAEDKDVCKNYQEAKDAFLGSFLYEYSRRH AKDAFLGSFLYEYSRRHPEYAVSVLLRLAK K D A S R R 1 1 0 1 0 0 1 1 0 0 2 0 0 2 0 2 0 0 2 0 0 0 13 0 1566.7355 CON__P02769 CON__P02769 347 359 yes yes 2 2.5748E-16 289.22 1 831100 831100 + 32 7 32 43 46 46 1 DDRDHINPDDLMK DIRNCATEAGFFAIRDDRDHINPDDLMKAV IRDDRDHINPDDLMKAVRKVAEVKKLEGTI R D D M K A 0 1 1 5 0 0 0 0 1 1 1 1 1 0 1 0 0 0 0 0 0 0 13 1 1582.7046 P53549 P53549 405 417 RPT4 26S protease subunit RPT4 yes yes 2;3;4 4.5659E-16 221.6 4 1062100000 1062100000 33 49 33 44;45;46;47 47;48;49;50;51 50 5 DDSPDLPK EKQEPERNECFLSHKDDSPDLPKLKPDPNT ECFLSHKDDSPDLPKLKPDPNTLCDEFKAD K D D P K L 0 0 0 3 0 0 0 0 0 0 1 1 0 0 2 1 0 0 0 0 0 0 8 0 885.40798 CON__P02769 CON__P02769 131 138 yes yes 2 0.0098675 152.47 1 0 0 + 34 7 34 48 52 52 1 DFLNNGEVDSASDFISK HDNETKAMLINLILRDFLNNGEVDSASDFI LNNGEVDSASDFISKLEYPHTDVSSSLEAR R D F S K L 1 0 2 3 0 0 1 1 0 1 1 1 0 2 0 3 0 0 0 1 0 0 17 0 1856.8428 P40016 P40016 240 256 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 1.9438E-11 254.94 1 18264000 18264000 35 39 35 49 53;54 53 2 DGVIEAK DSEQTVEYMVSRAIRDGVIEAKINHEDGFI YMVSRAIRDGVIEAKINHEDGFIETTELLN R D G A K I 1 0 0 1 0 0 1 1 0 1 0 1 0 0 0 0 0 0 0 1 0 0 7 0 730.38612 P40016 P40016 429 435 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 0.0027414 140.98 1 7695800 7695800 36 39 36 50 55 55 1 DHFINKLDAGK LMNDVMSLGIHRLWKDHFINKLDAGKRPNS RLWKDHFINKLDAGKRPNSTTPLNFIDVAG K D H G K R 1 0 1 2 0 0 0 1 1 1 1 2 0 1 0 0 0 0 0 0 0 0 11 1 1256.6513 P49017 P49017 95 105 COQ5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial yes yes 2 0.002498 137.9 1 4427800 4427800 37 45 37 51 56 56 1 DHINPDDLMK NCATEAGFFAIRDDRDHINPDDLMKAVRKV IRDDRDHINPDDLMKAVRKVAEVKKLEGTI R D H M K A 0 0 1 3 0 0 0 0 1 1 1 1 1 0 1 0 0 0 0 0 0 0 10 0 1196.5496 P53549 P53549 408 417 RPT4 26S protease subunit RPT4 yes yes 2 5.0757E-06 191.45 2 182340000 182340000 38 49 38 52;53 57;58 57 2 DKFNKTLQVSSR LSWLSVILLSPYAFKDKFNKTLQVSSRFEN AFKDKFNKTLQVSSRFENYPICIPPINKIK K D K S R F 0 1 1 1 0 1 0 0 0 0 1 2 0 1 0 2 1 0 0 1 0 0 12 2 1421.7627 P40987 P40987 133 144 CIN1 Chromosome instability protein 1 yes yes 2 0.022884 66.92 1 0 0 39 42 39 54 59 59 6;22 0 DQAAGGLSIR EAEEIGVEHLLRDVRDQAAGGLSIRLTNQL LRDVRDQAAGGLSIRLTNQLKSLKGLQSKL R D Q I R L 2 1 0 1 0 1 0 2 0 1 1 0 0 0 0 1 0 0 0 0 0 0 10 0 986.51451 Q08723 Q08723 180 189 RPN8 26S proteasome regulatory subunit RPN8 yes yes 2 5.0827E-06 191.4 1 19201000 19201000 40 55 40 55 60 60 1 DQYEQMAEK AAPGVDLSRILNEMRDQYEQMAEKNRRDAE ILNEMRDQYEQMAEKNRRDAETWFLSKTEE R D Q E K N 1 0 0 1 0 2 2 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 9 0 1140.4757 CON__P08779;CON__Q9Z2K1;CON__Q3ZAW8 CON__P08779 291 299 yes no 2 3.0654E-06 206.43 1 3174900 3174900 + 41 9 41 56 61 61 1 DSLALINDLLR SIKLATLHYQKKQYKDSLALINDLLREFKK KQYKDSLALINDLLREFKKLDDKPSLVDVH K D S L R E 1 1 1 2 0 0 0 0 0 1 4 0 0 0 0 1 0 0 0 0 0 0 11 0 1241.698 Q12377 Q12377 153 163 RPN6 26S proteasome regulatory subunit RPN6 yes yes 2 4.5967E-06 190.86 1 606200 606200 42 58 42 57 62 62 1 DSYLILDTLPSEFDSR DPDKLKPNDLVGVNKDSYLILDTLPSEFDS SYLILDTLPSEFDSRVKAMEVDEKPTETYS K D S S R V 0 1 0 3 0 0 1 0 0 1 3 0 0 1 1 3 1 0 1 0 0 0 16 0 1869.8996 P33297 P33297 151 166 RPT5 26S protease regulatory subunit 6A yes yes 2;3 4.2303E-11 309.68 7 182320000 182320000 43 31 43 58;59;60;61;62;63;64 63;64;65;66;67;68;69;70;71;72;73 63 11 DSYVGDEAQSK GRPRHQGIMVGMGQKDSYVGDEAQSKRGIL MGQKDSYVGDEAQSKRGILTLRYPIEHGIV K D S S K R 1 0 0 2 0 1 1 1 0 0 0 1 0 0 0 2 0 0 1 1 0 0 11 0 1197.515 P60010 P60010 51 61 ACT1 Actin yes yes 2 7.9649E-05 179.42 1 0 0 44 50 44 65 74 74 1 DYQELMNTK DALQQAKEDLARLLRDYQELMNTKLALDLE LARLLRDYQELMNTKLALDLEIATYRTLLE R D Y T K L 0 0 1 1 0 1 1 0 0 0 1 1 1 0 0 0 1 0 1 0 0 0 9 0 1140.5121 CON__P04264 CON__P04264 464 472 no no 2 0.01847 102.06 1 21017000 21017000 + 45 8 45 66 75 75 0 DYSPYFK KIRDWYQRQRPSEIKDYSPYFKTIEDLRNK RQRPSEIKDYSPYFKTIEDLRNKIIAATIE K D Y F K T 0 0 0 1 0 0 0 0 0 0 0 1 0 1 1 1 0 0 2 0 0 0 7 0 918.41233 CON__P02533;CON__Q6IFX2;CON__P08779;CON__Q9Z2K1;CON__Q3ZAW8 CON__P08779 163 169 no no 2 0.026128 101.21 1 3429100 3429100 + 46 3;9 46 67 76 76 1 DYTTVPR VRRAAVIALGFVLLRDYTTVPRIVQLLSKS ALGFVLLRDYTTVPRIVQLLSKSHNAHVRC R D Y P R I 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 2 0 1 1 0 0 7 0 850.41848 P32565 P32565 598 604 RPN2 26S proteasome regulatory subunit RPN2 yes yes 2 0.030003 98.418 1 4213200 4213200 47 29 47 68 77 77 1 EAVELPLVQADLYEQIGIDPPR YADVGGLDMQKQEIREAVELPLVQADLYEQ VQADLYEQIGIDPPRGVLLYGPPGTGKTML R E A P R G 2 1 0 2 0 2 3 1 0 2 3 0 0 0 3 0 0 0 1 2 0 0 22 0 2464.285 P33298 P33298 186 207 RPT3 26S protease regulatory subunit 6B homolog yes yes 3 0.00039198 131.31 1 640210 640210 48 32 48 69 78 78 1 EDAFSYPR SDQAIPKFQMNCYAKEDAFSYPRMYEEASG QMNCYAKEDAFSYPRMYEEASGKEVEKVAT K E D P R M 1 1 0 1 0 0 1 0 0 0 0 0 0 1 1 1 0 0 1 0 0 0 8 0 983.43486 P32565 P32565 779 786 RPN2 26S proteasome regulatory subunit RPN2 yes yes 2 0.0067785 120.46 1 1774300 1774300 49 29 49 70 79 79 1 EEIMHGLQAK ELLEHIETIGHLITKEEIMHGLQAK_____ HLITKEEIMHGLQAK_______________ K E E A K - 1 0 0 0 0 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 10 0 1154.5754 Q12250 Q12250 436 445 RPN5 26S proteasome regulatory subunit RPN5 yes yes 2 1.7198E-05 188.98 1 19269000 19269000 50 57 50 71 80 80 1 EGNDLYR HGGFSVFTGVGERTREGNDLYREMKETGVI TGVGERTREGNDLYREMKETGVINLEGESK R E G Y R E 0 1 1 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 7 0 865.393 P00830 P00830 226 232 ATP2 ATP synthase subunit beta, mitochondrial yes yes 2 0.017275 107.59 1 13086000 13086000 51 17 51 72 81 81 1 EIETYHNLLEGGQEDFESSGAGK QEYSLLLSIKMRLEKEIETYHNLLEGGQED LEGGQEDFESSGAGKIGLGGRGGSGGSYGR K E I G K I 1 0 1 1 0 1 5 4 1 1 2 1 0 1 0 2 1 0 1 0 0 0 23 0 2509.1245 CON__P35527 CON__P35527 450 472 yes yes 3 1.1038E-13 247.18 1 16243000 16243000 + 52 12 52 73 82 82 1 EKAPTIIFIDELDAIGTK GEGAKLVRDAFALAKEKAPTIIFIDELDAI PTIIFIDELDAIGTKRFDSEKSGDREVQRT K E K T K R 2 0 0 2 0 0 2 1 0 4 1 2 0 1 1 0 2 0 0 0 0 0 18 1 1973.0721 P33297 P33297 272 289 RPT5 26S protease regulatory subunit 6A yes yes 2;3 1.8088E-12 290.39 4 110400000 110400000 53 31 53 74;75;76;77 83;84;85;86;87;88;89 86 7 ELEQLVEFNR CFMHLLVQLFLWDSKELEQLVEFNRKVVIP LWDSKELEQLVEFNRKVVIPNLLCYYNLRS K E L N R K 0 1 1 0 0 1 3 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 10 0 1275.6459 P40016 P40016 151 160 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 3.2024E-16 315.22 1 45233000 45233000 54 39 54 78 90 90 1 ELEQLVEFNRK CFMHLLVQLFLWDSKELEQLVEFNRKVVIP WDSKELEQLVEFNRKVVIPNLLCYYNLRSL K E L R K V 0 1 1 0 0 1 3 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 11 1 1403.7409 P40016 P40016 151 161 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 4.3037E-07 223.87 1 2851100 2851100 55 39 55 79 91 91 1 ELIIGDR LKAVDALVPIGRGQRELIIGDRQTGKTAVA VPIGRGQRELIIGDRQTGKTAVALDTILNQ R E L D R Q 0 1 0 1 0 0 1 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 7 0 814.45487 P07251 P07251 202 208 ATP1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.028676 99.375 1 4521400 4521400 56 20 56 80 92 92 1 ELLKPSMSVALHR TGMSYVVRILSTLDRELLKPSMSVALHRHS DRELLKPSMSVALHRHSNALVDILPPDSDS R E L H R H 1 1 0 0 0 0 1 0 1 0 3 1 1 0 1 2 0 0 0 1 0 0 13 1 1479.8232 P33298 P33298 129 141 RPT3 26S protease regulatory subunit 6B homolog yes yes 2;3;4 1.4474E-06 191.53 3 282870000 282870000 57 32 57 81;82;83 93;94;95 93 3 ELTTEIDNNIEQISSYK QNRKDAEAWFNEKSKELTTEIDNNIEQISS TTEIDNNIEQISSYKSEITELRRNVQALEI K E L Y K S 0 0 2 1 0 1 3 0 0 3 1 1 0 0 0 2 2 0 1 0 0 0 17 0 1995.9637 CON__P13645 CON__P13645 346 362 yes yes 2 5.9567E-34 370.66 1 1227500 1227500 + 58 10 58 84 96 96 1 ENAPSIIFIDEVDSIATK GEGPRMVRDVFRLARENAPSIIFIDEVDSI PSIIFIDEVDSIATKRFDAQTGSDREVQRI R E N T K R 2 0 1 2 0 0 2 0 0 4 0 1 0 1 1 2 1 0 0 1 0 0 18 0 1960.9993 P33298 P33298 263 280 RPT3 26S protease regulatory subunit 6B homolog yes yes 2;3 1.0908E-11 294.26 3 43519000 43519000 59 32 59 85;86;87 97;98;99 99 3 ENAPSIIFIDEVDSIATKR GEGPRMVRDVFRLARENAPSIIFIDEVDSI SIIFIDEVDSIATKRFDAQTGSDREVQRIL R E N K R F 2 1 1 2 0 0 2 0 0 4 0 1 0 1 1 2 1 0 0 1 0 0 19 1 2117.1004 P33298 P33298 263 281 RPT3 26S protease regulatory subunit 6B homolog yes yes 3 0.024456 55.851 1 233040 233040 60 32 60 88 100 100 1 ENSESTTQGGNVNLDNTAVGK ANVVEVMDMNEIEDKENSESTTQGGNVNLD TQGGNVNLDNTAVGKAAVVKTSSRQTVFLP K E N G K A 1 0 4 1 0 1 2 3 0 0 1 1 0 0 0 2 3 0 0 2 0 0 21 0 2133.9774 P33297 P33297 95 115 RPT5 26S protease regulatory subunit 6A yes yes 2;3 4.4228E-19 303.44 2 440480000 440480000 61 31 61 89;90 101;102;103 101 3 EQGLPLAGSQGIYQLK SLLEAAKNKIAFALKEQGLPLAGSQGIYQL QGLPLAGSQGIYQLKIGDSQRTPRVPSDDS K E Q L K I 1 0 0 0 0 3 1 3 0 1 3 1 0 0 1 1 0 0 1 0 0 0 16 0 1700.9097 P40354 P40354 253 268 NTA1 Protein N-terminal amidase yes yes 2 7.791E-17 279.75 1 1682000 1682000 62 41 62 91 104 104 1 ETDPLVYNMTSFEQGEITFDGIGGLTEQIR TLDITTLTIMRILPRETDPLVYNMTSFEQG EITFDGIGGLTEQIRELREVIELPLKNPEI R E T I R E 0 1 1 2 0 2 4 4 0 3 2 0 1 2 1 1 4 0 1 1 0 0 30 0 3359.5868 P53549 P53549 162 191 RPT4 26S protease subunit RPT4 yes yes 3 8.2753E-09 169.23 1 518380 518380 63 49 63 92 105;106 106 2 ETGVINLEGESK GERTREGNDLYREMKETGVINLEGESKVAL EMKETGVINLEGESKVALVFGQMNEPPGAR K E T S K V 0 0 1 0 0 0 3 2 0 1 1 1 0 0 0 1 1 0 0 1 0 0 12 0 1274.6354 P00830 P00830 236 247 ATP2 ATP synthase subunit beta, mitochondrial yes yes 2 3.4048E-10 242.97 1 68970000 68970000 64 17 64 93 107 107 1 EVASNSELVQSSR DAETWFLSKTEELNKEVASNSELVQSSRSE NKEVASNSELVQSSRSEVTELRRVLQGLEI K E V S R S 1 1 1 0 0 1 2 0 0 0 1 0 0 0 0 4 0 0 0 2 0 0 13 0 1404.6845 CON__P08779 CON__P08779 318 330 yes yes 2 6.7972E-16 267.07 1 6822600 6822600 + 65 9 65 94 108 108 1 EVIELPLK FDGIGGLTEQIRELREVIELPLKNPEIFQR EQIRELREVIELPLKNPEIFQRVGIKPPKG R E V L K N 0 0 0 0 0 0 2 0 0 1 2 1 0 0 1 0 0 0 0 1 0 0 8 0 939.56408 P53549 P53549 195 202 RPT4 26S protease subunit RPT4 yes yes 2 0.00028653 172.03 1 431800000 431800000 66 49 66 95 109 109 1 EVIELPLKNPEIFQR FDGIGGLTEQIRELREVIELPLKNPEIFQR EVIELPLKNPEIFQRVGIKPPKGVLLYGPP R E V Q R V 0 1 1 0 0 1 3 0 0 2 2 1 0 1 2 0 0 0 0 1 0 0 15 1 1824.0145 P53549 P53549 195 209 RPT4 26S protease subunit RPT4 yes yes 2;3 7.8322E-07 198.37 3 634840000 634840000 67 49 67 96;97;98 110;111;112;113;114 110 5 EYELLTLQEDYIKDEQR NVNSDIYFKLKKLEKEYELLTLQEDYIKDE ELLTLQEDYIKDEQRHLKRELKRAQEEVKR K E Y Q R H 0 1 0 2 0 2 4 0 0 1 3 1 0 0 0 0 1 0 2 0 0 0 17 1 2184.0586 P33298 P33298 57 73 RPT3 26S protease regulatory subunit 6B homolog yes yes 2;3 2.5881E-17 281.32 2 227220000 227220000 68 32 68 99;100 115;116 116 2 EYLEVAQYLQEIYQTDAIK LEYYNLLVKISLHKREYLEVAQYLQEIYQT VAQYLQEIYQTDAIKSDEAKWKPVLSHIVY R E Y I K S 2 0 0 1 0 3 3 0 0 2 2 1 0 0 0 0 1 0 3 1 0 0 19 0 2316.1525 Q12250 Q12250 233 251 RPN5 26S proteasome regulatory subunit RPN5 yes yes 3 0.018395 84.035 1 71778 71778 69 57 69 101 117 117 1 FANQLHDEYLVSMR YDSEDPQQVFDERIKFANQLHDEYLVSMRY KFANQLHDEYLVSMRYPEDKKTQQNEKSEN K F A M R Y 1 1 1 1 0 1 1 0 1 0 2 0 1 1 0 1 0 0 1 1 0 0 14 0 1721.8195 P40016 P40016 467 480 RPN3 26S proteasome regulatory subunit RPN3 yes yes 3 0.00032168 158.52 1 3611500 3611500 70 39 70 102 118 118 1 FASFIDK VKAQEREQIKTLNNKFASFIDKVRFLEQQN QIKTLNNKFASFIDKVRFLEQQNQVLQTKW K F A D K V 1 0 0 1 0 0 0 0 0 1 0 1 0 2 0 1 0 0 0 0 0 0 7 0 826.4225 CON__P02538;CON__P48668;CON__P04259;CON__Q8VED5;CON__Q5XKE5;CON__O95678;CON__P19013;CON__P35908v2;CON__P35908;CON__Q7Z794;CON__Q9R0H5;CON__Q6NXH9;CON__P13647 CON__P35908v2 189 195 no no 2 0.0013236 147.69 1 10522000 10522000 + 71 13;4;11 71 103 119 119 1 FATLGIDPPK KLREVVELPLLSPERFATLGIDPPKGILLY LSPERFATLGIDPPKGILLYGPPGTGKTLC R F A P K G 1 0 0 1 0 0 0 1 0 1 1 1 0 1 2 0 1 0 0 0 0 0 10 0 1057.5808 P33299 P33299 235 244 RPT1 26S protease regulatory subunit 7 homolog yes yes 2 0.00016873 182.76 1 18373000 18373000 72 33 72 104 120 120 1 FDAQTGSDR SIIFIDEVDSIATKRFDAQTGSDREVQRIL SIATKRFDAQTGSDREVQRILIELLTQMDG R F D D R E 1 1 0 2 0 1 0 1 0 0 0 0 0 1 0 1 1 0 0 0 0 0 9 0 995.43084 P33298 P33298 282 290 RPT3 26S protease regulatory subunit 6B homolog yes yes 2 4.0933E-06 199.46 1 265390000 265390000 73 32 73 105 121;122 121 2 FDDGAGGDNEVQR CIIFFDEIDAVGGARFDDGAGGDNEVQRTM ARFDDGAGGDNEVQRTMLELITQLDGFDPR R F D Q R T 1 1 1 3 0 1 1 3 0 0 0 0 0 1 0 0 0 0 0 1 0 0 13 0 1378.5749 P33299 P33299 319 331 RPT1 26S protease regulatory subunit 7 homolog yes yes 2 4.2598E-16 280.38 2 56945000 56945000 74 33 74 106;107 123;124 124 2 FIADNDTLTLNRLITTIGDK IVPGVKIRRGKKGKKFIADNDTLTLNRLIT DTLTLNRLITTIGDKYDDIAESKLEKARRL K F I D K Y 1 1 2 3 0 0 0 1 0 3 3 1 0 1 0 0 4 0 0 0 0 0 20 1 2233.1954 P43586 P43586 99 118 LOC1 60S ribosomal subunit assembly/export protein LOC1 yes yes 3 0.0229 65.149 1 0 0 75 44 75 108 125 125 23 0 FIKDELR RRLEAQRNALNDKVRFIKDELRLLQEPGSY NALNDKVRFIKDELRLLQEPGSYVGEVIKI R F I L R L 0 1 0 1 0 0 1 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 7 1 919.51272 Q01939 Q01939 57 63 RPT6 26S protease regulatory subunit 8 homolog yes yes 2 0.021355 98.458 1 4716400 4716400 76 51 76 109 126 126 1 FITSNHK VLYPDSSSFKKNLLKFITSNHKSSVPGSAE SFKKNLLKFITSNHKSSVPGSAELRNSYPA K F I H K S 0 0 1 0 0 0 0 0 1 1 0 1 0 1 0 1 1 0 0 0 0 0 7 0 845.43955 P40016 P40016 95 101 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 0.0023113 143.02 1 37577000 37577000 77 39 77 110 127 127 1 FKDLGEEHFK GVFRRDTHKSEIAHRFKDLGEEHFKGLVLI EIAHRFKDLGEEHFKGLVLIAFSQYLQQCP R F K F K G 0 0 0 1 0 0 2 1 1 0 1 2 0 2 0 0 0 0 0 0 0 0 10 1 1248.6139 CON__P02769 CON__P02769 35 44 yes yes 2;3 1.6037E-06 213.8 2 43083000 43083000 + 78 7 78 111;112 128;129 129 2 FKEEDEKESQR LSKEDIEKMVAEAEKFKEEDEKESQRIASK EAEKFKEEDEKESQRIASKNQLESIAYSLK K F K Q R I 0 1 0 1 0 1 4 0 0 0 0 2 0 1 0 1 0 0 0 0 0 0 11 2 1423.6579 P10592;P10591 P10592 522 532 SSA2;SSA1 Heat shock protein SSA2;Heat shock protein SSA1 yes no 3 0.0077077 105.13 1 759200 759200 79 21 79 113 130 130 1 FLEQQNK KTLNNKFASFIDKVRFLEQQNKVLETKWTL ASFIDKVRFLEQQNKVLETKWTLLQEQGTK R F L N K V 0 0 1 0 0 2 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 7 0 905.46068 CON__P02538;CON__P48668;CON__P04259;CON__Q8VED5;CON__Q5XKE5;CON__O95678;CON__P13647 CON__P02538 183 189 no no 2 0.0060657 125.25 1 7615400 7615400 + 80 4;11 80 114 131 131 1 FLEQQNQVLQTK KSLNNQFASFIDKVRFLEQQNQVLQTKWEL KVRFLEQQNQVLQTKWELLQQVDTSTRTHN R F L T K W 0 0 1 0 0 4 1 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 12 0 1474.778 CON__P04264;CON__P35908v2;CON__P35908;CON__Q7Z794;CON__Q9R0H5;CON__Q6NXH9 CON__P04264 200 211 no no 2;3 2.7163E-06 203.03 2 52908000 52908000 + 81 8;13 81 115;116 132;133 132 1 FLSQPFAVAEVFTGIPGK EQDKLTVERARKIQRFLSQPFAVAEVFTGI QPFAVAEVFTGIPGKLVRLKDTVASFKAVL R F L G K L 2 0 0 0 0 1 1 2 0 1 1 1 0 3 2 1 1 0 0 2 0 0 18 0 1907.0193 P00830 P00830 446 463 ATP2 ATP synthase subunit beta, mitochondrial yes yes 2 0.0013143 147.51 1 200700 200700 82 17 82 117 134 134 1 FSEGTSADR CIIFMDEVDAIGGRRFSEGTSADREIQRTL AIGGRRFSEGTSADREIQRTLMELLTQMDG R F S D R E 1 1 0 1 0 0 1 1 0 0 0 0 0 1 0 2 1 0 0 0 0 0 9 0 968.41994 P53549 P53549 291 299 RPT4 26S protease subunit RPT4 yes yes 2 8.4849E-05 185.72 3 1145100000 1145100000 83 49 83 118;119;120 135;136;137;138;139;140;141;142 137 8 FSEGTSADREIQR CIIFMDEVDAIGGRRFSEGTSADREIQRTL RRFSEGTSADREIQRTLMELLTQMDGFDNL R F S Q R T 1 2 0 1 0 1 2 1 0 1 0 0 0 1 0 2 1 0 0 0 0 0 13 1 1494.7063 P53549 P53549 291 303 RPT4 26S protease subunit RPT4 yes yes 2;3 0.0016216 136.53 2 251240000 251240000 84 49 84 121;122 143;144;145 143 3 FSSSSGYGGGSSR YSRFSSSGGRGGGGRFSSSSGYGGGSSRVC GRFSSSSGYGGGSSRVCGRGGGGSFGYSYG R F S S R V 0 1 0 0 0 0 0 4 0 0 0 0 0 1 0 6 0 0 1 0 0 0 13 0 1234.5214 CON__P35527 CON__P35527 47 59 yes yes 2 1.2876E-06 214.04 1 39414000 39414000 + 85 12 85 123 146 146 1 FTSTITK YYHLTKAVKLGDLKKFTSTITKYKQLLLKD VKLGDLKKFTSTITKYKQLLLKDDTYQLCV K F T T K Y 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 1 3 0 0 0 0 0 7 0 796.43307 P40016 P40016 360 366 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 0.031135 97.602 1 53274000 53274000 86 39 86 124 147 147 1 FVIGGPQGDAGLTGR MLDENTKYFIQPSGRFVIGGPQGDAGLTGR FVIGGPQGDAGLTGRKIIVDAYGGASSVGG R F V G R K 1 1 0 1 0 1 0 5 0 1 1 0 0 1 1 0 1 0 0 1 0 0 15 0 1443.747 P10659;P19358 P10659 237 251 SAM1;SAM2 S-adenosylmethionine synthase 1;S-adenosylmethionine synthase 2 yes no 2 1.4633E-06 205.31 1 3672000 3672000 87 22 87 125 148 148 1 GALMYGPPGTGK KRADKFKDMGIRAPKGALMYGPPGTGKTLL APKGALMYGPPGTGKTLLARACAAQTNATF K G A G K T 1 0 0 0 0 0 0 4 0 0 1 1 1 0 2 0 1 0 1 0 0 0 12 0 1147.5696 P33297 P33297 217 228 RPT5 26S protease regulatory subunit 6A yes yes 2 0.00055898 163.16 1 555670000 555670000 88 31 88 126 149 149 1 GDASPIVK LESKAIESLVKDFLKGDASPIVKSQEIFEN LVKDFLKGDASPIVKSQEIFENQDSSVFQL K G D V K S 1 0 0 1 0 0 0 1 0 1 0 1 0 0 1 1 0 0 0 1 0 0 8 0 785.42832 P17967 P17967 359 366 PDI1 Protein disulfide-isomerase yes yes 2 0.0074794 116.9 1 862220 862220 89 24 89 127 150 150 1 GENALKDAK QISNLQQSISDAEQRGENALKDAKNKLNDL SDAEQRGENALKDAKNKLNDLEDALQQAKE R G E A K N 2 0 1 1 0 0 1 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 9 1 944.49271 CON__P04264 CON__P04264 433 441 yes yes 2 0.0014189 145.46 1 932620 932620 + 90 8 90 128 151 151 1 GFSSGSAVVSGGSR SCKSRGRGGGGGGFRGFSSGSAVVSGGSRR RGFSSGSAVVSGGSRRSTSSFSCLSRHGGG R G F S R R 1 1 0 0 0 0 0 4 0 0 0 0 0 1 0 5 0 0 0 2 0 0 14 0 1253.6 CON__P35908v2;CON__P35908 CON__P35908v2 21 34 no no 2 1.8056E-06 205.12 1 8507400 8507400 + 91 13 91 129 152 152 1 GGSGGGGSISGGGYGSGGGSGGR GSSSYGSGGRQSGSRGGSGGGGSISGGGYG ISGGGYGSGGGSGGRYGSGGGSKGGSISGG R G G G R Y 0 1 0 0 0 0 0 15 0 1 0 0 0 0 0 5 0 0 1 0 0 0 23 0 1740.7412 CON__P35908v2;CON__P35908 CON__P35908v2 550 572 yes no 2 0.00044817 136.34 1 2733600 2733600 + 92 13 92 130 153 153 1 GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK GGGSGGGYGGGSGSRGGSGGSHGGGSGFGG EASGSGGGYGGGSGKSSHS___________ R G G G K S 1 0 0 0 0 0 3 23 1 0 0 1 0 1 0 8 0 0 2 0 0 0 40 0 3222.2743 CON__P35527 CON__P35527 580 619 yes yes 3 6.8369E-13 152.01 1 16725000 16725000 + 93 12 93 131 154 154 1 GGSGGSYGGGGSGGGYGGGSGSR GGRGGSGGSYGRGSRGGSGGSYGGGGSGGG GGGSGGGYGGGSGSRGGSGGSYGGGSGSGG R G G S R G 0 1 0 0 0 0 0 15 0 0 0 0 0 0 0 5 0 0 2 0 0 0 23 0 1790.7204 CON__P35527 CON__P35527 491 513 yes yes 2 7.5649E-06 174.4 1 9346400 9346400 + 94 12 94 132 155 155 1 GGSISGGGYGSGGGK GGGSGGRYGSGGGSKGGSISGGGYGSGGGK GGSISGGGYGSGGGKHSSGGGSRGGSSSGG K G G G K H 0 0 0 0 0 0 0 9 0 1 0 1 0 0 0 3 0 0 1 0 0 0 15 0 1196.5422 CON__P35908v2;CON__P35908 CON__P35908v2 581 595 yes no 2 0.001178 150.09 1 1999100 1999100 + 95 13 95 133 156 156 1 GMQDLVEDFK DSIVGERGRLDSELRGMQDLVEDFKNKYED DSELRGMQDLVEDFKNKYEDEINKRTAAEN R G M F K N 0 0 0 2 0 1 1 1 0 0 1 1 1 1 0 0 0 0 0 1 0 0 10 0 1180.5434 CON__P02538 CON__P02538 241 250 yes yes 2 0.0035703 137.46 1 1534200 1534200 + 96 4 96 134 157 157 1 GPIDAAGR LGRVVDALGNPIDGKGPIDAAGRSRAQVKA GNPIDGKGPIDAAGRSRAQVKAPGILPRRS K G P G R S 2 1 0 1 0 0 0 2 0 1 0 0 0 0 1 0 0 0 0 0 0 0 8 0 755.3926 P07251 P07251 156 163 ATP1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.00059076 153.15 1 4150800 4150800 97 20 97 135 158 158 1 GPYESGSGHSSGLGHR SYGPYRSGSGWSSSRGPYESGSGHSSGLGH PYESGSGHSSGLGHRESRSGQSSGYGQHGS R G P H R E 0 1 0 0 0 0 1 5 2 0 1 0 0 0 1 4 0 0 1 0 0 0 16 0 1583.7077 CON__Q86YZ3 CON__Q86YZ3 1038 1053 yes no 2 1.389E-06 200.93 1 1826100 1826100 + 98 15 98 136 159 159 1 GSDQAIPK FLSLSFTPTTVIGIRGSDQAIPKFQMNCYA TTVIGIRGSDQAIPKFQMNCYAKEDAFSYP R G S P K F 1 0 0 1 0 1 0 1 0 1 0 1 0 0 1 1 0 0 0 0 0 0 8 0 814.41848 P32565 P32565 763 770 RPN2 26S proteasome regulatory subunit RPN2 yes yes 2 0.027503 98.629 1 1253300 1253300 99 29 99 137 160 160 1 GSSSGGGYSSGSSSYGSGGR SNVASKAAFGGSGGRGSSSGGGYSSGSSSY GGYSSGSSSYGSGGRQSGSRGGSGGGGSIS R G S G R Q 0 1 0 0 0 0 0 8 0 0 0 0 0 0 0 9 0 0 2 0 0 0 20 0 1739.6983 CON__P35908v2;CON__P35908 CON__P35908v2 525 544 yes no 2 7.5007E-05 172.09 1 2175900 2175900 + 100 13 100 138 161 161 1 GSTHITFSKETQANR LDNLFYLSPPFIFRKGSTHITFSKETQANR GSTHITFSKETQANRKYNLPEPLSYAAVGG K G S N R K 1 1 1 0 0 1 1 1 1 1 0 1 0 1 0 2 3 0 0 0 0 0 15 1 1675.8278 P32794 P32794 220 234 AFG2 ATPase family gene 2 protein yes yes 2 0.012539 105.66 1 0 0 101 30 101 139 162 162 3;18 0 GVLLYGPPGTGK KNPEIFQRVGIKPPKGVLLYGPPGTGKTLL PPKGVLLYGPPGTGKTLLAKAVAATIGANF K G V G K T 0 0 0 0 0 0 0 4 0 0 2 1 0 0 2 0 1 0 1 1 0 0 12 0 1157.6445 P33298;P53549 P53549 217 228 RPT3;RPT4 26S protease regulatory subunit 6B homolog;26S protease subunit RPT4 no no 2 0.0025077 143.03 4 2737200000 2737200000 102 49;32 102 140;141;142;143 163;164;165;166;167;168;169;170;171;172;173;174 164 12 GVSDEANLNETGR AQPTEVSSILEERIKGVSDEANLNETGRVL IKGVSDEANLNETGRVLAVGDGIARVFGLN K G V G R V 1 1 2 1 0 0 2 2 0 0 1 0 0 0 0 1 1 0 0 1 0 0 13 0 1360.6219 P07251 P07251 55 67 ATP1 ATP synthase subunit alpha, mitochondrial yes yes 2 6.8168E-05 205.12 1 0 0 103 20 103 144 175 175 1 GVVDSEDLPLNLSR DEAEDLIPEWLSFVKGVVDSEDLPLNLSRE KGVVDSEDLPLNLSREMLQQNKIMKVIRKN K G V S R E 0 1 1 2 0 0 1 1 0 0 3 0 0 0 1 2 0 0 0 2 0 0 14 0 1512.7784 P15108;P02829 P15108 363 376 HSC82;HSP82 ATP-dependent molecular chaperone HSC82;ATP-dependent molecular chaperone HSP82 yes no 2 3.0117E-06 190.36 1 1920500 1920500 104 18 104 145 176 176 1 HALIVYDDLSK FTAASIGEWFRDNGKHALIVYDDLSKQAVA DNGKHALIVYDDLSKQAVAYRQLSLLLRRP K H A S K Q 1 0 0 2 0 0 0 0 1 1 2 1 0 0 0 1 0 0 1 1 0 0 11 0 1272.6714 P07251 P07251 300 310 ATP1 ATP synthase subunit alpha, mitochondrial yes yes 2 2.836E-06 204.79 1 6653800 6653800 105 20 105 146 177 177 1 HEDFVEGISEVQAR EAGMIALRNGQSSVKHEDFVEGISEVQARK KHEDFVEGISEVQARKSKSVSFYA______ K H E A R K 1 1 0 1 0 1 3 1 1 1 0 0 0 1 0 1 0 0 0 2 0 0 14 0 1614.7638 P33297 P33297 412 425 RPT5 26S protease regulatory subunit 6A yes yes 2;3 7.3852E-11 308.55 9 3048400000 3048400000 106 31 106 147;148;149;150;151;152;153;154;155 178;179;180;181;182;183;184;185;186;187;188;189;190;191;192;193;194;195;196;197;198;199;200;201;202;203;204;205;206;207 178 30 HGGGGGGFGGGGFGSR GGSRRSTSSFSCLSRHGGGGGGFGGGGFGS GGGGGGFGGGGFGSRSLVGLGGTKSISISV R H G S R S 0 1 0 0 0 0 0 11 1 0 0 0 0 2 0 1 0 0 0 0 0 0 16 0 1319.5755 CON__P35908v2;CON__P35908 CON__P35908v2 46 61 yes no 2 0.010103 120.86 1 3447200 3447200 + 107 13 107 156 208 208 1 HGSGLGHSSSHGQHGSGSGR GRQGSGSGHSPSRGRHGSGLGHSSSHGQHG GHSSSHGQHGSGSGRSSSRGPYESRSGHSS R H G G R S 0 1 0 0 0 1 0 7 4 0 1 0 0 0 0 6 0 0 0 0 0 0 20 0 1884.8324 CON__Q86YZ3 CON__Q86YZ3 1248 1267 yes no 3 3.1568E-06 188.16 1 494840 494840 + 108 15 108 157 209 209 1 HGSSSGSSSHYGQHGSGSR GQHGSRSGQSSRGERHGSSSGSSSHYGQHG SGSSSHYGQHGSGSRQSSGHGRQGSGSGHS R H G S R Q 0 1 0 0 0 1 0 5 3 0 0 0 0 0 0 8 0 0 1 0 0 0 19 0 1857.7739 CON__Q86YZ3 CON__Q86YZ3 1209 1227 yes no 3 0.0016695 132.51 1 183830 183830 + 109 15 109 158 210 210 1 HHWEDLQK VLNEDDLAFGGEANKHHWEDLQKRVIEHNL FGGEANKHHWEDLQKRVIEHNLRVISEYYS K H H Q K R 0 0 0 1 0 1 1 0 2 0 1 1 0 0 0 0 0 1 0 0 0 0 8 0 1091.5148 Q12250 Q12250 336 343 RPN5 26S proteasome regulatory subunit RPN5 yes yes 2;3 0.00026107 159.04 2 42700000 42700000 110 57 110 159;160 211;212 211 2 IDALNENK KKIIAEKTKIPAVFKIDALNENKVLVLDTD KIPAVFKIDALNENKVLVLDTDYKKYLLFC K I D N K V 1 0 2 1 0 0 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 8 0 915.46616 CON__P02754 CON__P02754 84 91 yes yes 2 0.00059181 153.08 1 7908000 7908000 + 111 5 111 161 213 213 1 IEISELNR QITAGRHGDSVRNSKIEISELNRVIQRLRS DSVRNSKIEISELNRVIQRLRSEIDNVKKQ K I E N R V 0 1 1 0 0 0 2 0 0 2 1 0 0 0 0 1 0 0 0 0 0 0 8 0 972.52401 CON__P04264;CON__P35908v2;CON__P35908 CON__P04264 396 403 no no 2 5.1015E-06 193.28 1 54913000 54913000 + 112 8;13 112 162 214 214 1 IETLDPALIR FDDRGDVKVIMATNKIETLDPALIRPGRID MATNKIETLDPALIRPGRIDRKILFENPDL K I E I R P 1 1 0 1 0 0 1 0 0 2 2 0 0 0 1 0 1 0 0 0 0 0 10 0 1139.655 P40327 P40327 331 340 RPT2 26S protease regulatory subunit 4 homolog yes yes 2 0.0007341 159.58 1 2983400 2983400 113 40 113 163 215 215 1 IETLDPALIRPGR FDDRGDVKVIMATNKIETLDPALIRPGRID NKIETLDPALIRPGRIDRKILFENPDLSTK K I E G R I 1 2 0 1 0 0 1 1 0 2 2 0 0 0 2 0 1 0 0 0 0 0 13 1 1449.8304 P40327 P40327 331 343 RPT2 26S protease regulatory subunit 4 homolog yes yes 2;3 1.958E-06 182.16 2 31264000 31264000 114 40 114 164;165 216;217 217 2 IHTAKVK EIPLPNEAGRLEIFKIHTAKVKKTGEFDFE AGRLEIFKIHTAKVKKTGEFDFEAAVKMSD K I H V K K 1 0 0 0 0 0 0 0 1 1 0 2 0 0 0 0 1 0 0 1 0 0 7 1 795.49667 P53549 P53549 363 369 RPT4 26S protease subunit RPT4 yes yes 2 0.013224 83.614 1 0 0 115 49 115 166 218 218 1 IIMATNRPDTLDPALLR LLTQMDGFDNLGQTKIIMATNRPDTLDPAL MATNRPDTLDPALLRPGRLDRKVEIPLPNE K I I L R P 2 2 1 2 0 0 0 0 0 2 3 0 1 0 2 0 2 0 0 0 0 0 17 1 1909.0455 P53549 P53549 323 339 RPT4 26S protease subunit RPT4 yes yes 2;3 2.0417E-05 196.7 2 62361000 62361000 116 49 116 167;168 219;220 220 2 IIMATNRPDTLDPALLRPGR LLTQMDGFDNLGQTKIIMATNRPDTLDPAL NRPDTLDPALLRPGRLDRKVEIPLPNEAGR K I I G R L 2 3 1 2 0 0 0 1 0 2 3 0 1 0 3 0 2 0 0 0 0 0 20 2 2219.2209 P53549 P53549 323 342 RPT4 26S protease subunit RPT4 yes yes 2;3;4 8.6868E-05 151.39 5 704030000 704030000 117 49 117 169;170;171;172;173 221;222;223;224;225;226 222 5 IISLTYK LCVRLRSNVIKTGIRIISLTYKKISLRDIC NVIKTGIRIISLTYKKISLRDICLKLNLDS R I I Y K K 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 1 1 0 1 0 0 0 7 0 836.50076 P40016 P40016 394 400 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 0.00039706 157.99 1 47468000 47468000 118 39 118 174 227 227 1 IITHPNFNGNTLDNDIMLIK IDVLEGNEQFINAAKIITHPNFNGNTLDND NFNGNTLDNDIMLIKLSSPATLNSRVATVS K I I I K L 0 0 4 2 0 0 0 1 1 4 2 1 1 1 1 0 2 0 0 0 0 0 20 0 2282.1729 CON__P00761 CON__P00761 78 97 yes yes 3 0.00085217 136.43 1 4870600 4870600 + 119 2 119 175 228 228 1 IKFEMEQNLR LLDIDNTRMTLDDFRIKFEMEQNLRQGVDA LDDFRIKFEMEQNLRQGVDADINGLRQVLD R I K L R Q 0 1 1 0 0 1 2 0 0 1 1 1 1 1 0 0 0 0 0 0 0 0 10 1 1306.6704 CON__P35527 CON__P35527 241 250 yes yes 2;3 0.0019457 142 2 9442300 9442300 + 120 12 120 176;177 229;230 229 1 ILFENPDLSTK TLDPALIRPGRIDRKILFENPDLSTKKKIL IDRKILFENPDLSTKKKILGIHTSKMNLSE K I L T K K 0 0 1 1 0 0 1 0 0 1 2 1 0 1 1 1 1 0 0 0 0 0 11 0 1275.6711 P40327 P40327 348 358 RPT2 26S protease regulatory subunit 4 homolog yes yes 2 3.0666E-06 202.96 1 42456000 42456000 121 40 121 178 231 231 1 ILGIHTSK RKILFENPDLSTKKKILGIHTSKMNLSEDV DLSTKKKILGIHTSKMNLSEDVNLETLVTT K I L S K M 0 0 0 0 0 0 0 1 1 2 1 1 0 0 0 1 1 0 0 0 0 0 8 0 867.5178 P40327 P40327 361 368 RPT2 26S protease regulatory subunit 4 homolog yes yes 2 0.018481 138.83 1 0 0 122 40 122 179 232 232 1 ILIELLTQMDGFDQSTNVK KRFDAQTGSDREVQRILIELLTQMDGFDQS LLTQMDGFDQSTNVKVIMATNRADTLDPAL R I L V K V 0 0 1 2 0 2 1 1 0 2 3 1 1 1 0 1 2 0 0 1 0 0 19 0 2164.1086 P33298 P33298 295 313 RPT3 26S protease regulatory subunit 6B homolog yes yes 2;3 1.3423E-17 323.37 2 324870 324870 123 32 123 180;181 233;234 233 2 ILSTLDR TGIVSSTTGMSYVVRILSTLDRELLKPSMS TGMSYVVRILSTLDRELLKPSMSVALHRHS R I L D R E 0 1 0 1 0 0 0 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 7 0 816.47052 P33298 P33298 122 128 RPT3 26S protease regulatory subunit 6B homolog yes yes 2 0.0062048 124.59 1 645060000 645060000 124 32 124 182 235 235 1 IMRVQLNRTK PFVSAPLLYFTSSKKIMRVQLNRTKELSRT TSSKKIMRVQLNRTKELSRTTDKKPVADRT K I M T K E 0 2 1 0 0 1 0 0 0 1 1 1 1 0 0 0 1 0 0 1 0 0 10 2 1257.734 P38778 P38778 457 466 SMF2 Manganese transporter SMF2 yes yes 2 0.023858 80.438 1 0 0 125 38 125 183 236 236 21 0 INISNNLQK GTPDDDEIDVENHDRINISNNLQKALTVKT VENHDRINISNNLQKALTVKTNDELMVIYI R I N Q K A 0 0 3 0 0 1 0 0 0 2 1 1 0 0 0 1 0 0 0 0 0 0 9 0 1042.5771 Q08723 Q08723 255 263 RPN8 26S proteasome regulatory subunit RPN8 yes yes 2 0.00030093 175.51 1 17086000 17086000 126 55 126 184 237 237 1 IQDWYDK KVQALEEANNDLENKIQDWYDKKGPAAIQK ANNDLENKIQDWYDKKGPAAIQKNYSPYYN K I Q D K K 0 0 0 2 0 1 0 0 0 1 0 1 0 0 0 0 0 1 1 0 0 0 7 0 966.4447 CON__P35527 CON__P35527 185 191 yes yes 2 0.0094206 113.26 1 5374800 5374800 + 127 12 127 185 238 238 1 IQDWYDKK KVQALEEANNDLENKIQDWYDKKGPAAIQK NNDLENKIQDWYDKKGPAAIQKNYSPYYNT K I Q K K G 0 0 0 2 0 1 0 0 0 1 0 2 0 0 0 0 0 1 1 0 0 0 8 1 1094.5397 CON__P35527 CON__P35527 185 192 yes yes 2;3 0.0025698 123.21 2 17357000 17357000 + 128 12 128 186;187 239;240 240 2 IQNDNNLK VLSPYGNLQNDLIHKIQNDNNLKKLESQES QNDLIHKIQNDNNLKKLESQESLVKLFTTN K I Q L K K 0 0 3 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 8 0 957.48796 Q12250 Q12250 284 291 RPN5 26S proteasome regulatory subunit RPN5 yes yes 2 0.00029457 171.53 1 11410000 11410000 129 57 129 188 241 241 1 IQNDNNLKK VLSPYGNLQNDLIHKIQNDNNLKKLESQES NDLIHKIQNDNNLKKLESQESLVKLFTTNE K I Q K K L 0 0 3 1 0 1 0 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 9 1 1085.5829 Q12250 Q12250 284 292 RPN5 26S proteasome regulatory subunit RPN5 yes yes 2 3.9441E-05 185.72 1 0 0 130 57 130 189 242 242 1 ISISTSGGSFR GYGSRSLYNLGGSKRISISTSGGSFRNRFG GSKRISISTSGGSFRNRFGAGAGGGYGFGG R I S F R N 0 1 0 0 0 0 0 2 0 2 0 0 0 1 0 4 1 0 0 0 0 0 11 0 1110.5669 CON__P13647 CON__P13647 74 84 yes yes 2 0.00068762 159.34 1 6555100 6555100 + 131 11 131 190 243 243 1 IVDLLASR RQASDLASSKEVLAKIVDLLASRNKWDDLN SKEVLAKIVDLLASRNKWDDLNEQLTLLSK K I V S R N 1 1 0 1 0 0 0 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 8 0 885.52837 Q12250 Q12250 62 69 RPN5 26S proteasome regulatory subunit RPN5 yes yes 2 0.0037585 135.77 1 35979000 35979000 132 57 132 191 244 244 1 IVGSELIQK LAKAVANQTSATFLRIVGSELIQKYLGDGP SATFLRIVGSELIQKYLGDGPRLCRQIFKV R I V Q K Y 0 0 0 0 0 1 1 1 0 2 1 1 0 0 0 1 0 0 0 1 0 0 9 0 985.5808 P40327 P40327 247 255 RPT2 26S protease regulatory subunit 4 homolog yes yes 2 2.0423E-05 188.76 1 69545000 69545000 133 40 133 192 245 245 1 IVNFEKPK VNQGIIYAKVNRPAKIVNFEKPKNSSQLLN KVNRPAKIVNFEKPKNSSQLLNEWSHNVDE K I V P K N 0 0 1 0 0 0 1 0 0 1 0 2 0 1 1 0 0 0 0 1 0 0 8 1 973.55967 Q12250 Q12250 399 406 RPN5 26S proteasome regulatory subunit RPN5 yes yes 2 0.0026096 136.27 1 28338000 28338000 134 57 134 193 246 246 1 IVQLLSK ALGFVLLRDYTTVPRIVQLLSKSHNAHVRC RDYTTVPRIVQLLSKSHNAHVRCGTAFALG R I V S K S 0 0 0 0 0 1 0 0 0 1 2 1 0 0 0 1 0 0 0 1 0 0 7 0 799.51674 P32565;P47169 P32565 605 611 RPN2;MET5 26S proteasome regulatory subunit RPN2;Sulfite reductase [NADPH] subunit beta yes no 2 0.0078299 116.9 1 12704000 12704000 135 29 135 194 247 247 1 KDVLVLYYAPWCGHCK QLVGKNHDEIVNDPKKDVLVLYYAPWCGHC DVLVLYYAPWCGHCKRLAPTYQELADTYAN K K D C K R 1 0 0 1 2 0 0 1 1 0 2 2 0 0 1 0 0 1 2 2 0 0 16 1 1893.927 P17967 P17967 395 410 PDI1 Protein disulfide-isomerase yes yes 3 0.029496 48.351 1 9161500 9161500 136 24 136 195 248 248 1 KFTSTITK PYYHLTKAVKLGDLKKFTSTITKYKQLLLK VKLGDLKKFTSTITKYKQLLLKDDTYQLCV K K F T K Y 0 0 0 0 0 0 0 0 0 1 0 2 0 1 0 1 3 0 0 0 0 0 8 1 924.52803 P40016 P40016 359 366 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 0.0022225 143.73 1 33853000 33853000 137 39 137 196 249 249 1 KIEFPLPSEDSR DVLDPALLRSGRLDRKIEFPLPSEDSRAQI LDRKIEFPLPSEDSRAQILQIHSRKMTTDD R K I S R A 0 1 0 1 0 0 2 0 0 1 1 1 0 1 2 2 0 0 0 0 0 0 12 1 1416.7249 P33297 P33297 346 357 RPT5 26S protease regulatory subunit 6A yes yes 2;3 2.0511E-06 199.8 5 1301100000 1301100000 138 31 138 197;198;199;200;201 250;251;252;253;254;255;256;257;258;259;260;261 250 12 KIEFPSLR DTLDPALLRPGRLDRKIEFPSLRDRRERRL RPGRLDRKIEFPSLRDRRERRLIFGTIASK R K I L R D 0 1 0 0 0 0 1 0 0 1 1 1 0 1 1 1 0 0 0 0 0 0 8 1 988.57057 P33298 P33298 337 344 RPT3 26S protease regulatory subunit 6B homolog yes yes 2 0.020948 104.06 3 214940000 214940000 139 32 139 202;203;204 262;263;264 264 3 KILFENPDLSTK ETLDPALIRPGRIDRKILFENPDLSTKKKI IDRKILFENPDLSTKKKILGIHTSKMNLSE R K I T K K 0 0 1 1 0 0 1 0 0 1 2 2 0 1 1 1 1 0 0 0 0 0 12 1 1403.766 P40327 P40327 347 358 RPT2 26S protease regulatory subunit 4 homolog yes yes 2;3 4.3877E-10 254.07 2 10552000 10552000 140 40 140 205;206 265;266 265 2 KLEGTIEYQK PDDLMKAVRKVAEVKKLEGTIEYQKL____ VAEVKKLEGTIEYQKL______________ K K L Q K L 0 0 0 0 0 1 2 1 0 1 1 2 0 0 0 0 1 0 1 0 0 0 10 1 1207.6449 P53549 P53549 427 436 RPT4 26S protease subunit RPT4 yes yes 1;2;3 5.5264E-10 261.16 7 3198300000 3198300000 141 49 141 207;208;209;210;211;212;213 267;268;269;270;271;272;273;274;275;276;277;278;279 268 11 KLESQESLVK QNDLIHKIQNDNNLKKLESQESLVKLFTTN DNNLKKLESQESLVKLFTTNELMRWPIVQK K K L V K L 0 0 0 0 0 1 2 0 0 0 2 2 0 0 0 2 0 0 0 1 0 0 10 1 1159.6449 Q12250 Q12250 292 301 RPN5 26S proteasome regulatory subunit RPN5 yes yes 2;3 2.1554E-06 230.24 2 91434000 91434000 142 57 142 214;215 280;281 280 2 KMTTDDDINWQELAR PSEDSRAQILQIHSRKMTTDDDINWQELAR KMTTDDDINWQELARSTDEFNGAQLKAVTV R K M A R S 1 1 1 3 0 1 1 0 0 1 1 1 1 0 0 0 2 1 0 0 0 0 15 1 1834.852 P33297 P33297 367 381 RPT5 26S protease regulatory subunit 6A yes yes 2;3 7.8498E-17 327.62 2 317940000 317940000 143 31 143 216;217 282;283;284 283 3 KNNTVEVEDVKR SSNLISVAQQIAMKRKNNTVEVEDVKRAYL MKRKNNTVEVEDVKRAYLLFLDSARSVKYV R K N K R A 0 1 2 1 0 0 2 0 0 0 0 2 0 0 0 0 1 0 0 3 0 0 12 2 1429.7525 Q12464 Q12464 414 425 RVB2 RuvB-like protein 2 yes yes 2;3 7.3509E-07 213.35 2 3998300 3998300 144 60 144 218;219 285;286 285 2 KPIHADPPSFAEQSTSAEILETGIK GEPIDERGPIKSKLRKPIHADPPSFAEQST AEQSTSAEILETGIKVVDLLAPYARGGKIG R K P I K V 3 0 0 1 0 1 3 1 1 3 1 2 0 1 3 3 2 0 0 0 0 0 25 1 2665.3599 P00830 P00830 148 172 ATP2 ATP synthase subunit beta, mitochondrial yes yes 3 9.9125E-05 135.3 1 8416000 8416000 145 17 145 220 287 287 1 KQLEEIR SEILKPFEKKQEEEKKQLEEIRGNPLSIGT EKKQEEEKKQLEEIRGNPLSIGTLEEIIDD K K Q I R G 0 1 0 0 0 1 2 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 7 1 914.51853 P40327 P40327 94 100 RPT2 26S protease regulatory subunit 4 homolog yes yes 2 0.00035405 161.9 1 10613000 10613000 146 40 146 221 288 288 1 KQTALVELLK HADICTLPDTEKQIKKQTALVELLKHKPKA EKQIKKQTALVELLKHKPKATEEQLKTVME K K Q L K H 1 0 0 0 0 1 1 0 0 0 3 2 0 0 0 0 1 0 0 1 0 0 10 1 1141.7071 CON__P02769 CON__P02769 548 557 yes yes 2 4.7213E-06 185.33 1 19553000 19553000 + 147 7 147 222 289 289 1 KTGEFDFEAAVK AGRLEIFKIHTAKVKKTGEFDFEAAVKMSD KVKKTGEFDFEAAVKMSDGFNGADIRNCAT K K T V K M 2 0 0 1 0 0 2 1 0 0 0 2 0 2 0 0 1 0 0 1 0 0 12 1 1340.6612 P53549 P53549 370 381 RPT4 26S protease subunit RPT4 yes yes 2 0.00028895 176.18 2 4037400 4037400 148 49 148 223;224 290;291 290 2 KVEFSLPDLEGR NTLDPALLRPGRIDRKVEFSLPDLEGRANI IDRKVEFSLPDLEGRANIFRIHSKSMSVER R K V G R A 0 1 0 1 0 0 2 1 0 0 2 1 0 1 1 1 0 0 0 1 0 0 12 1 1388.73 P33299 P33299 374 385 RPT1 26S protease regulatory subunit 7 homolog yes yes 3 0.018156 75.739 1 2396700 2396700 149 33 149 225 292 292 1 KVEIPLPNEAGR DTLDPALLRPGRLDRKVEIPLPNEAGRLEI LDRKVEIPLPNEAGRLEIFKIHTAKVKKTG R K V G R L 1 1 1 0 0 0 2 1 0 1 1 1 0 0 2 0 0 0 0 1 0 0 12 1 1321.7354 P53549 P53549 346 357 RPT4 26S protease subunit RPT4 yes yes 2;3 0.0028133 141.71 7 2307300000 2307300000 150 49 150 226;227;228;229;230;231;232 293;294;295;296;297;298;299;300 293 8 KYAEEDQVQELLK DVDSSGVNDLHHSEKKYAEEDQVQELLKVL EKKYAEEDQVQELLKVLNEISKTTLTLDPR K K Y L K V 1 0 0 1 0 2 3 0 0 0 2 2 0 0 0 0 0 0 1 1 0 0 13 1 1591.8094 P40016 P40016 24 36 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2;3 3.5613E-32 340.93 2 39684000 39684000 151 39 151 233;234 301;302 301 2 KYEDEINKR SELNNMQDLVEDYKKKYEDEINKRTAAEND VEDYKKKYEDEINKRTAAENDFVTLKKDVD K K Y K R T 0 1 1 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 9 2 1193.6041 CON__P35908v2;CON__P35908 CON__P35908v2 267 275 no no 2;3 3.4202E-06 195.57 2 4664300 4664300 + 152 13 152 235;236 303;304 304 2 LAELEEALQK AEQRGELALKDARNKLAELEEALQKAKQDM DARNKLAELEEALQKAKQDMARLLREYQEL K L A Q K A 2 0 0 0 0 1 3 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1142.6183 CON__P13647 CON__P13647 432 441 yes yes 2 2.8286E-06 207.29 1 4892700 4892700 + 153 11 153 237 305 305 1 LASYLDK LTANEKSTMQELNSRLASYLDKVQALEEAN TMQELNSRLASYLDKVQALEEANNDLENKI R L A D K V 1 0 0 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 1 0 0 0 7 0 808.43307 CON__P02533;CON__P19012;CON__A2A4G1;CON__P08727;CON__P19001;CON__P08730-1;CON__P05784;CON__Q99456;CON__P35527;CON__P13645;CON__P08779 CON__P35527 164 170 no no 2 0.0062048 124.59 1 46245000 46245000 + 154 12;3;9;10 154 238 306 306 1 LATLHYQK KREKRVFLKHSLSIKLATLHYQKKQYKDSL KHSLSIKLATLHYQKKQYKDSLALINDLLR K L A Q K K 1 0 0 0 0 1 0 0 1 0 2 1 0 0 0 0 1 0 1 0 0 0 8 0 972.53927 Q12377 Q12377 141 148 RPN6 26S proteasome regulatory subunit RPN6 yes yes 2 0.00069599 151.29 1 9876100 9876100 155 58 155 239 307 307 1 LDELRDEGK ECCQAADKAACLLPKLDELRDEGKASSAKQ ACLLPKLDELRDEGKASSAKQRLKCASLQK K L D G K A 0 1 0 2 0 0 2 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 9 1 1073.5353 CON__P02768-1 CON__P02768-1 206 214 yes yes 2;3 0.00038157 164.46 2 4183700 4183700 + 156 6 156 240;241 308;309 308 2 LDHTENDVR ADTYANATSDVLIAKLDHTENDVRGVVIEG DVLIAKLDHTENDVRGVVIEGYPTIVLYPG K L D V R G 0 1 1 2 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 9 0 1097.5102 P17967 P17967 435 443 PDI1 Protein disulfide-isomerase yes yes 2;3 0.0072878 101.25 2 1587500 1587500 157 24 157 242;243 310;311 311 2 LDILDPALLRPGR FETSKNIKIIMATNRLDILDPALLRPGRID NRLDILDPALLRPGRIDRKIEFPPPSVAAR R L D G R I 1 2 0 2 0 0 0 1 0 1 4 0 0 0 2 0 0 0 0 0 0 0 13 1 1447.8511 Q01939 Q01939 297 309 RPT6 26S protease regulatory subunit 8 homolog yes yes 3 0.022182 63.727 1 1101900 1101900 158 51 158 244 312 312 1 LEGTIEYQK DDLMKAVRKVAEVKKLEGTIEYQKL_____ VAEVKKLEGTIEYQKL______________ K L E Q K L 0 0 0 0 0 1 2 1 0 1 1 1 0 0 0 0 1 0 1 0 0 0 9 0 1079.5499 P53549 P53549 428 436 RPT4 26S protease subunit RPT4 yes yes 2 0.0020477 145.16 1 232930000 232930000 159 49 159 245 313 313 1 LFLAQYR AAQVKALKQVAGSLKLFLAQYREVAAFAQF KQVAGSLKLFLAQYREVAAFAQFGSDLDAS K L F Y R E 1 1 0 0 0 1 0 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 7 0 909.50724 P07251 P07251 429 435 ATP1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.0023937 142.63 1 2873200 2873200 160 20 160 246 314 314 1 LFTTNELMR DNNLKKLESQESLVKLFTTNELMRWPIVQK QESLVKLFTTNELMRWPIVQKTYEPVLNED K L F M R W 0 1 1 0 0 0 1 0 0 0 2 0 1 1 0 0 2 0 0 0 0 0 9 0 1123.5696 Q12250 Q12250 302 310 RPN5 26S proteasome regulatory subunit RPN5 yes yes 2 0.0066538 120.87 1 9766100 9766100 161 57 161 247 315 315 1 LGEEHPLQVAR LAPSHLWDIMGDRQRLGEEHPLQVARCTKI DRQRLGEEHPLQVARCTKIIKGNGESDETT R L G A R C 1 1 0 0 0 1 2 1 1 0 2 0 0 0 1 0 0 0 0 1 0 0 11 0 1247.6622 P33299 P33299 91 101 RPT1 26S protease regulatory subunit 7 homolog yes yes 2;3 0.0012848 117.02 2 62490000 62490000 162 33 162 248;249 316;317 317 2 LGEHNIDVLEGNEQFINAAK VVSAAHCYKSRIQVRLGEHNIDVLEGNEQF IDVLEGNEQFINAAKIITHPNFNGNTLDND R L G A K I 2 0 3 1 0 1 3 2 1 2 2 1 0 1 0 0 0 0 0 1 0 0 20 0 2210.0968 CON__P00761 CON__P00761 58 77 yes yes 2;3 1.3593E-17 268.92 2 636680000 636680000 + 163 2 163 250;251 318;319;320;321 320 4 LGVHEDTQNR EQFDKFYSAFAKNIKLGVHEDTQNRAALAK AKNIKLGVHEDTQNRAALAKLLRYNSTKSV K L G N R A 0 1 1 1 0 1 1 1 1 0 1 0 0 0 0 0 1 0 0 1 0 0 10 0 1167.5632 P15108;P02829 P15108 423 432 HSC82;HSP82 ATP-dependent molecular chaperone HSC82;ATP-dependent molecular chaperone HSP82 yes no 3 0.014729 96.034 1 1951600 1951600 164 18 164 252 322 322 1 LIFGTIASK RKIEFPSLRDRRERRLIFGTIASKMSLAPE DRRERRLIFGTIASKMSLAPEADLDSLIIR R L I S K M 1 0 0 0 0 0 0 1 0 2 1 1 0 1 0 1 1 0 0 0 0 0 9 0 948.56442 P33298 P33298 351 359 RPT3 26S protease regulatory subunit 6B homolog yes yes 2 0.00047637 167.23 1 477670000 477670000 165 32 165 253 323 323 1 LIVDNDNWVYK SFVNGFLNLGYCNDKLIVDNDNWVYKTKGD CNDKLIVDNDNWVYKTKGDGMTSAVASIGS K L I Y K T 0 0 2 2 0 0 0 0 0 1 1 1 0 0 0 0 0 1 1 2 0 0 11 0 1377.6929 P38764 P38764 399 409 RPN1 26S proteasome regulatory subunit RPN1 yes yes 2 0.0020981 162.64 1 0 0 166 37 166 254 324 324 1 LKDTVASFK AVAEVFTGIPGKLVRLKDTVASFKAVLEGK PGKLVRLKDTVASFKAVLEGKYDNIPEHAF R L K F K A 1 0 0 1 0 0 0 0 0 0 1 2 0 1 0 1 1 0 0 1 0 0 9 1 1007.5651 P00830 P00830 467 475 ATP2 ATP synthase subunit beta, mitochondrial yes yes 2 0.00030309 169.65 1 52827000 52827000 167 17 167 255 325 325 1 LKDVVEYLDK RLTNQLKSLKGLQSKLKDVVEYLDKVINKE GLQSKLKDVVEYLDKVINKELPINHTILGK K L K D K V 0 0 0 2 0 0 1 0 0 0 2 2 0 0 0 0 0 0 1 2 0 0 10 1 1220.6653 Q08723 Q08723 204 213 RPN8 26S proteasome regulatory subunit RPN8 yes yes 2 0.013539 104.07 1 9000900 9000900 168 55 168 256 326 326 1 LKEDDSSLYEASLNALK EDAKLKTDLELLVERLKEDDSSLYEASLNA EDDSSLYEASLNALKESIKNSTSSMTAVPK R L K L K E 2 0 1 2 0 0 2 0 0 0 4 2 0 0 0 3 0 0 1 0 0 0 17 1 1894.9524 P38764 P38764 56 72 RPN1 26S proteasome regulatory subunit RPN1 yes yes 3 0.0089271 104.16 1 1190800 1190800 169 37 169 257 327 327 1 LKPNDLVGVNK QTVFLPMVGLVDPDKLKPNDLVGVNKDSYL DPDKLKPNDLVGVNKDSYLILDTLPSEFDS K L K N K D 0 0 2 1 0 0 0 1 0 0 2 2 0 0 1 0 0 0 0 2 0 0 11 1 1195.6925 P33297 P33297 140 150 RPT5 26S protease regulatory subunit 6A yes yes 2;3 0.0047233 121.6 3 2060700000 2060700000 170 31 170 258;259;260 328;329;330;331 329 4 LKYENEVALR LLQIDNARLAADDFRLKYENEVALRQSVEA ADDFRLKYENEVALRQSVEADINGLRRVLD R L K L R Q 1 1 1 0 0 0 2 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 10 1 1233.6717 CON__P13645 CON__P13645 236 245 yes yes 2 0.0010301 148.91 1 5980900 5980900 + 171 10 171 261 332 332 1 LLDAAVVGQEHYDVASK LGIYPAVDPLDSKSRLLDAAVVGQEHYDVA DAAVVGQEHYDVASKVQETLQTYKSLQDII R L L S K V 3 0 0 2 0 1 1 1 1 0 2 1 0 0 0 1 0 0 1 3 0 0 17 0 1813.921 P00830 P00830 390 406 ATP2 ATP synthase subunit beta, mitochondrial yes yes 2;3 3.6832E-12 236.05 2 76369000 76369000 172 17 172 262;263 333;334 334 2 LLDNEIR EILNLSTQELQTRAKLLDNEIRIFRSELQR QELQTRAKLLDNEIRIFRSELQRLSHENNV K L L I R I 0 1 1 1 0 0 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 7 0 871.47633 P33297 P33297 36 42 RPT5 26S protease regulatory subunit 6A yes yes 2 0.016073 149.4 2 0 0 173 31 173 264;265 335;336 336 2 LLEGEDAHLSSQQASGQSYSSR DVKTRLEQEIATYRRLLEGEDAHLSSQQAS HLSSQQASGQSYSSREVFTSSSSSSSRQTR R L L S R E 2 1 0 1 0 3 2 2 1 0 3 0 0 0 0 6 0 0 1 0 0 0 22 0 2349.0833 CON__P08779 CON__P08779 420 441 yes yes 3 0.00045258 128.05 1 9157200 9157200 + 174 9 174 266 337 337 1 LLEGEDAHLSSSQFSSGSQSSR DVKTRLEQEIATYRRLLEGEDAHLSSSQFS HLSSSQFSSGSQSSRDVTSSSRQIRTKVMD R L L S R D 1 1 0 1 0 2 2 2 1 0 3 0 0 1 0 8 0 0 0 0 0 0 22 0 2308.0567 CON__P02533;CON__Q61782 CON__P02533 418 439 yes no 3 4.3664E-06 176.46 1 12185000 12185000 + 175 3 175 267 338 338 1 LLQEPGSYVGEVIK NALNDKVRFIKDELRLLQEPGSYVGEVIKI RLLQEPGSYVGEVIKIVSDKKVLVKVQPEG R L L I K I 0 0 0 0 0 1 2 2 0 1 2 1 0 0 1 1 0 0 1 2 0 0 14 0 1530.8294 Q01939 Q01939 64 77 RPT6 26S protease regulatory subunit 8 homolog yes yes 2 0.0043317 137.09 1 4685500 4685500 176 51 176 268 339 339 1 LNDLEDALQQAK AEQRGENALKDAKNKLNDLEDALQQAKEDL KNKLNDLEDALQQAKEDLARLLRDYQELMN K L N A K E 2 0 1 2 0 2 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 12 0 1356.6885 CON__P04264 CON__P04264 444 455 yes yes 2 3.2666E-16 293.88 1 41293000 41293000 + 177 8 177 269 340 340 1 LNDLEEALQQAK AEQRGEHALKDARNKLNDLEEALQQAKEDL RNKLNDLEEALQQAKEDLARLLRDYQELMN K L N A K E 2 0 1 1 0 2 2 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 12 0 1370.7042 CON__P35908v2;CON__P35908 CON__P35908v2 442 453 yes no 2 2.8924E-23 322.92 1 5374500 5374500 + 178 13 178 270 341 341 1 LNLDSEQTVEYMVSR SLTYKKISLRDICLKLNLDSEQTVEYMVSR LNLDSEQTVEYMVSRAIRDGVIEAKINHED K L N S R A 0 1 1 1 0 1 2 0 0 0 2 0 1 0 0 2 1 0 1 2 0 0 15 0 1782.8458 P40016 P40016 411 425 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 1.6009E-10 236.42 1 1138700 1138700 179 39 179 271 342 342 1 LPENVTPEEQHK ______________________________ ______________________________ - L P H K G 0 0 1 0 0 1 3 0 1 0 1 1 0 0 2 0 1 0 0 1 0 0 12 0 1419.6994 CON__ENSEMBL:ENSBTAP00000038329 CON__ENSEMBL:ENSBTAP00000038329 1 12 yes yes 2 6.2186E-16 285.88 1 2805800 2805800 + 180 1 180 272 343 343 1 LPNIYPSTR FGRKKRKGGPATAEKLPNIYPSTRCKLKLL PATAEKLPNIYPSTRCKLKLLRMERIKDHL K L P T R C 0 1 1 0 0 0 0 0 0 1 1 0 0 0 2 1 1 0 1 0 0 0 9 0 1059.5713 P40327 P40327 46 54 RPT2 26S protease regulatory subunit 4 homolog yes yes 2 0.0062101 123.21 1 16601000 16601000 181 40 181 273 344 344 1 LQNVTKTDLK CLQRGNNFNELYLERLQNVTKTDLKNAMQK LYLERLQNVTKTDLKNAMQKYFVNMFDSNK R L Q L K N 0 0 1 1 0 1 0 0 0 0 2 2 0 0 0 0 2 0 0 1 0 0 10 1 1158.6608 Q12496 Q12496 967 976 Uncharacterized protein YOL098C yes yes 2 0.023383 67.169 1 0 0 182 61 182 274 345 345 29;30 0 LREVVELPLLSPER VTYSDVGGCKDQIEKLREVVELPLLSPERF KLREVVELPLLSPERFATLGIDPPKGILLY K L R E R F 0 2 0 0 0 0 3 0 0 0 4 0 0 0 2 1 0 0 0 2 0 0 14 1 1648.9512 P33299 P33299 221 234 RPT1 26S protease regulatory subunit 7 homolog yes yes 2 0.017222 117.95 1 473530 473530 183 33 183 275 346 346 0 LRSEIDHVK NTKQEIAEINRMIQRLRSEIDHVKKQCANL NRMIQRLRSEIDHVKKQCANLQAAIADAEQ R L R V K K 0 1 0 1 0 0 1 0 1 1 1 1 0 0 0 1 0 0 0 1 0 0 9 1 1095.6037 CON__P02538;CON__P48668;CON__P04259 CON__P02538 391 399 no no 3 0.011781 96.342 1 1458700 1458700 + 184 4 184 276 347 347 1 LRSEIDNVK NSKIEISELNRVIQRLRSEIDNVKKQISNL NRVIQRLRSEIDNVKKQISNLQQSISDAEQ R L R V K K 0 1 1 1 0 0 1 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 9 1 1072.5877 CON__P04264 CON__P04264 408 416 no no 2;3 0.0067369 106.68 2 13725000 13725000 + 185 8 185 277;278 348;349 348 2 LRSEIDNVKK NSKIEISELNRVIQRLRSEIDNVKKQISNL RVIQRLRSEIDNVKKQISNLQQSISDAEQR R L R K K Q 0 1 1 1 0 0 1 0 0 1 1 2 0 0 0 1 0 0 0 1 0 0 10 2 1200.6826 CON__P04264 CON__P04264 408 417 no no 2;3 1.8554E-05 187.99 2 19049000 19049000 + 186 8 186 279;280 350;351 350 2 LSEHFLYLAK SFEYEGVQDIIGNGKLSEHFLYLAKELNLT IGNGKLSEHFLYLAKELNLTGPKVPEDIYK K L S A K E 1 0 0 0 0 0 1 0 1 0 3 1 0 1 0 1 0 0 1 0 0 0 10 0 1219.6601 P38764 P38764 335 344 RPN1 26S proteasome regulatory subunit RPN1 yes yes 3 0.019639 131.62 1 1482600 1482600 187 37 187 281 352 352 1 LSHENNVMLEK LLDNEIRIFRSELQRLSHENNVMLEKIKDN ELQRLSHENNVMLEKIKDNKEKIKNNRQLP R L S E K I 0 0 2 0 0 0 2 0 1 0 2 1 1 0 0 1 0 0 0 1 0 0 11 0 1312.6445 P33297 P33297 51 61 RPT5 26S protease regulatory subunit 6A yes yes 2;3 0.0001646 178.54 2 1713200000 1713200000 188 31 188 282;283 353;354;355 355 3 LSQMILDK ISKIIGLDTQQVEGKLSQMILDKIFYGVLD TQQVEGKLSQMILDKIFYGVLDQGNGWLYV K L S D K I 0 0 0 1 0 1 0 0 0 1 2 1 1 0 0 1 0 0 0 0 0 0 8 0 946.51575 Q12377 Q12377 377 384 RPN6 26S proteasome regulatory subunit RPN6 yes yes 2 0.00021541 176.44 1 3178000 3178000 189 58 189 284 356 356 1 LSSPATLNSR NFNGNTLDNDIMLIKLSSPATLNSRVATVS IMLIKLSSPATLNSRVATVSLPRSCAAAGT K L S S R V 1 1 1 0 0 0 0 0 0 0 2 0 0 0 1 3 1 0 0 0 0 0 10 0 1044.5564 CON__P00761 CON__P00761 98 107 yes yes 2 0.00084959 154.85 2 820980000 820980000 + 190 2 190 285;286 357;358 358 2 LVLEVAQHLGENTVR PAILNALEIKTPQGKLVLEVAQHLGENTVR LVLEVAQHLGENTVRTIAMDGTEGLVRGEK K L V V R T 1 1 1 0 0 1 2 1 1 0 3 0 0 0 0 0 1 0 0 3 0 0 15 0 1676.921 P00830 P00830 79 93 ATP2 ATP synthase subunit beta, mitochondrial yes yes 2;3 8.7544E-11 245.5 2 16655000 16655000 191 17 191 287;288 359;360 360 2 LVNELTEFAK FSQYLQQCPFDEHVKLVNELTEFAKTCVAD DEHVKLVNELTEFAKTCVADESHAGCEKSL K L V A K T 1 0 1 0 0 0 2 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 10 0 1162.6234 CON__P02769 CON__P02769 66 75 yes yes 2 0.00023395 180.09 1 45779000 45779000 + 192 7 192 289 361 361 1 LVTDLTK LSQKFPKAEFVEVTKLVTDLTKVHKECCHG AEFVEVTKLVTDLTKVHKECCHGDLLECAD K L V T K V 0 0 0 1 0 0 0 0 0 0 2 1 0 0 0 0 2 0 0 1 0 0 7 0 788.46437 CON__P02768-1;CON__P02769 CON__P02769 257 263 no no 2 0.00034329 162.31 1 125210000 125210000 + 193 7;6 193 290 362 362 1 LYDKTENDIK DQLKQRRQNIRDLEKLYDKTENDIKALQSI RDLEKLYDKTENDIKALQSIGQLIGEVMKE K L Y I K A 0 0 1 2 0 0 1 0 0 1 1 2 0 0 0 0 1 0 1 0 0 0 10 1 1237.619 P53549 P53549 87 96 RPT4 26S protease subunit RPT4 yes yes 2;3 2.4996E-07 204.79 6 1707400000 1707400000 194 49 194 291;292;293;294;295;296 363;364;365;366;367;368;369;370;371;372;373 363 11 MCDDITKYLR QDNEYKTLIFASTKRMCDDITKYLREDGWP ASTKRMCDDITKYLREDGWPALAIHGDKDQ R M C L R E 0 1 0 2 1 0 0 0 0 1 1 1 1 0 0 0 1 0 1 0 0 0 10 1 1256.5893 P24783 P24783 372 381 DBP2 ATP-dependent RNA helicase DBP2 yes yes 3 0.030097 67.456 1 0 0 195 26 195 297 374 374 0 0 MQVTAEDFK AMCTEAGLLALRERRMQVTAEDFKQAKERV ALRERRMQVTAEDFKQAKERVMKNKVEENL R M Q F K Q 1 0 0 1 0 1 1 0 0 0 0 1 1 1 0 0 1 0 0 1 0 0 9 0 1067.4957 P40327 P40327 409 417 RPT2 26S protease regulatory subunit 4 homolog yes yes 2 0.01178 110.76 1 6416100 6416100 196 40 196 298 375 375 1 MSDGFNGADIR KVKKTGEFDFEAAVKMSDGFNGADIRNCAT AAVKMSDGFNGADIRNCATEAGFFAIRDDR K M S I R N 1 1 1 2 0 0 0 2 0 1 0 0 1 1 0 1 0 0 0 0 0 0 11 0 1181.5135 P53549 P53549 382 392 RPT4 26S protease subunit RPT4 yes yes 2 1.1522E-15 284.62 1 258470000 258470000 197 49 197 299 376 376 1 MSLAPEADLDSLIIR DRRERRLIFGTIASKMSLAPEADLDSLIIR MSLAPEADLDSLIIRNDSLSGAVIAAIMQE K M S I R N 2 1 0 2 0 0 1 0 0 2 3 0 1 0 1 2 0 0 0 0 0 0 15 0 1642.86 P33298 P33298 360 374 RPT3 26S protease regulatory subunit 6B homolog yes yes 2;3 1.6921E-10 272.59 2 27438000 27438000 198 32 198 300;301 377;378 377 2 MTLDDFR TVGNNKTLLDIDNTRMTLDDFRIKFEMEQN LLDIDNTRMTLDDFRIKFEMEQNLRQGVDA R M T F R I 0 1 0 2 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 7 0 896.4062 CON__P35527 CON__P35527 234 240 yes yes 2 0.0042568 133.81 1 8957500 8957500 + 199 12 199 302 379 379 1 MTTDDDINWQELAR SEDSRAQILQIHSRKMTTDDDINWQELARS KMTTDDDINWQELARSTDEFNGAQLKAVTV K M T A R S 1 1 1 3 0 1 1 0 0 1 1 0 1 0 0 0 2 1 0 0 0 0 14 0 1706.757 P33297 P33297 368 381 RPT5 26S protease regulatory subunit 6A yes yes 2 2.3765E-32 340.93 3 321830000 321830000 200 31 200 303;304;305 380;381;382;383;384;385;386 380 7 NCATEAGFFAIR AAVKMSDGFNGADIRNCATEAGFFAIRDDR DIRNCATEAGFFAIRDDRDHINPDDLMKAV R N C I R D 3 1 1 0 1 0 1 1 0 1 0 0 0 2 0 0 1 0 0 0 0 0 12 0 1298.6078 P53549 P53549 393 404 RPT4 26S protease subunit RPT4 yes yes 2 1.013E-15 275.28 1 2823400 2823400 201 49 201 306 387 387 1 NFLSVITNK QQTEKLNPQVADINKNFLSVITNKHQEGLA VADINKNFLSVITNKHQEGLAKFGACVAQG K N F N K H 0 0 2 0 0 0 0 0 0 1 1 1 0 1 0 1 1 0 0 1 0 0 9 0 1034.576 P32565 P32565 681 689 RPN2 26S proteasome regulatory subunit RPN2 yes yes 2 8.7936E-10 247.58 1 3863600 3863600 202 29 202 307 388 388 1 NGQSSVKHEDFVEGISEVQAR QLKAVTVEAGMIALRNGQSSVKHEDFVEGI KHEDFVEGISEVQARKSKSVSFYA______ R N G A R K 1 1 1 1 0 2 3 2 1 1 0 1 0 1 0 3 0 0 0 3 0 0 21 1 2315.1142 P33297 P33297 405 425 RPT5 26S protease regulatory subunit 6A yes yes 2;3;4 4.0571E-10 233.84 3 26884000 26884000 203 31 203 308;309;310 389;390;391 391 3 NHDEIVNDPK IFENQDSSVFQLVGKNHDEIVNDPKKDVLV QLVGKNHDEIVNDPKKDVLVLYYAPWCGHC K N H P K K 0 0 2 2 0 0 1 0 1 1 0 1 0 0 1 0 0 0 0 1 0 0 10 0 1179.552 P17967 P17967 385 394 PDI1 Protein disulfide-isomerase yes yes 2 0.015325 106.4 1 22892000 22892000 204 24 204 311 392 392 1 NHEEEMKDLR MQIESLTEELAYLKKNHEEEMKDLRNVSTG AYLKKNHEEEMKDLRNVSTGDVNVEMNAAP K N H L R N 0 1 1 1 0 0 3 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 10 1 1299.5877 CON__P13645 CON__P13645 286 295 yes yes 2;3 2.5677E-06 201.84 2 7827200 7827200 + 205 10 205 312;313 393;394 394 2 NHEEEMNALR MQIESLKEELAYLKKNHEEEMNALRGQVGG AYLKKNHEEEMNALRGQVGGDVNVEMDAAP K N H L R G 1 1 2 0 0 0 3 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 10 0 1241.5459 CON__P02533;CON__Q6IFX2 CON__P02533 252 261 no no 2 2.4824E-06 209.73 1 3660900 3660900 + 206 3 206 314 395 395 1 NKPGVYTK QLQGIVSWGYGCAQKNKPGVYTKVCNYVNW GYGCAQKNKPGVYTKVCNYVNWIQQTIAAN K N K T K V 0 0 1 0 0 0 0 1 0 0 0 2 0 0 1 0 1 0 1 1 0 0 8 1 905.49707 CON__P00761;CON__P07477 CON__P00761 209 216 yes no 2 0.0031033 132.76 1 3312300 3312300 + 207 2 207 315 396 396 1 NKVEENLEGLYL VTAEDFKQAKERVMKNKVEENLEGLYL___ VMKNKVEENLEGLYL_______________ K N K Y L - 0 0 2 0 0 0 3 1 0 0 3 1 0 0 0 0 0 0 1 1 0 0 12 1 1419.7246 P40327 P40327 426 437 RPT2 26S protease regulatory subunit 4 homolog yes yes 2 0.0033017 132.25 1 4394500 4394500 208 40 208 316 397 397 1 NKWDDLNEQLTLLSK SKEVLAKIVDLLASRNKWDDLNEQLTLLSK NKWDDLNEQLTLLSKKHGQLKLSIQYMIQK R N K S K K 0 0 2 2 0 1 1 0 0 0 4 2 0 0 0 1 1 1 0 0 0 0 15 1 1815.9367 Q12250 Q12250 70 84 RPN5 26S proteasome regulatory subunit RPN5 yes yes 2;3 5.5121E-08 242.4 2 3827400 3827400 209 57 209 317;318 398;399;400 400 3 NKYEDEINK DSELKNMQDMVEDYRNKYEDEINKRTNAEN MVEDYRNKYEDEINKRTNAENEFVTIKKDV R N K N K R 0 0 2 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 9 1 1151.5459 CON__P04264;CON__H-INV:HIT000016045;CON__P02538;CON__P48668;CON__P04259;CON__Q8VED5;CON__Q5XKE5;CON__P13647 CON__P04264 268 276 no no 2 0.0023743 138.4 1 1776800 1776800 + 210 8;4;11 210 319 401 401 1 NKYEDEINKR DSELKNMQDMVEDYRNKYEDEINKRTNAEN VEDYRNKYEDEINKRTNAENEFVTIKKDVD R N K K R T 0 1 2 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 10 2 1307.647 CON__P04264;CON__H-INV:HIT000016045;CON__P02538;CON__P48668;CON__P04259;CON__Q8VED5;CON__P13647 CON__P04264 268 277 no no 2;3 9.934E-10 237.92 2 84862000 84862000 + 211 8;4;11 211 320;321 402;403;404;405 405 4 NLDLDSIIAEVK SVTDTNVILSMDNSRNLDLDSIIAEVKAQY NSRNLDLDSIIAEVKAQYEEIAQRSKEEAE R N L V K A 1 0 1 2 0 0 1 0 0 2 2 1 0 0 0 1 0 0 0 1 0 0 12 0 1328.7187 CON__P02538;CON__P48668;CON__P04259;CON__Q8VED5;CON__Q5XKE5;CON__O95678;CON__P35908v2;CON__P35908;CON__P13647 CON__P35908v2 342 353 no no 2 1.5298E-16 298.58 1 1793000 1793000 + 212 13;4;11 212 322 406 406 1 NMQDMVEDYR DQLKSDQSRLDSELKNMQDMVEDYRNKYED DSELKNMQDMVEDYRNKYEDEINKRTNAEN K N M Y R N 0 1 1 2 0 1 1 0 0 0 0 0 2 0 0 0 0 0 1 1 0 0 10 0 1299.5224 CON__P04264 CON__P04264 258 267 yes yes 2 1.223E-06 218.6 1 18935000 18935000 + 213 8 213 323 407 407 1 NNTVEVEDVKR SNLISVAQQIAMKRKNNTVEVEDVKRAYLL MKRKNNTVEVEDVKRAYLLFLDSARSVKYV K N N K R A 0 1 2 1 0 0 2 0 0 0 0 1 0 0 0 0 1 0 0 3 0 0 11 1 1301.6575 Q12464 Q12464 415 425 RVB2 RuvB-like protein 2 yes yes 2;3 1.6921E-06 214.05 2 11034000 11034000 214 60 214 324;325 408;409 409 2 NPSDITQEEYNAFYK QELEELNKTKPLWTRNPSDITQEEYNAFYK NPSDITQEEYNAFYKSISNDWEDPLYVKHF R N P Y K S 1 0 2 1 0 1 2 0 0 1 0 1 0 1 1 1 1 0 2 0 0 0 15 0 1817.8108 P15108;P02829 P15108 276 290 HSC82;HSP82 ATP-dependent molecular chaperone HSC82;ATP-dependent molecular chaperone HSP82 yes no 2 0.025145 101.38 1 2032300 2032300 215 18 215 326 410 410 1 NQETAISVAK TQEDFELAVGKVMNKNQETAISVAKLFK__ KVMNKNQETAISVAKLFK____________ K N Q A K L 2 0 1 0 0 1 1 0 0 1 0 1 0 0 0 1 1 0 0 1 0 0 10 0 1059.556 Q01939 Q01939 393 402 RPT6 26S protease regulatory subunit 8 homolog yes yes 2 0.021331 101.97 1 3726400 3726400 216 51 216 327 411 411 1 NQQIVAGKPLYVAIAQR CFSTPEEATKAITEKNQQIVAGKPLYVAIA QIVAGKPLYVAIAQRKDVRRSQLAQQIQAR K N Q Q R K 3 1 1 0 0 3 0 1 0 2 1 1 0 0 1 0 0 0 1 2 0 0 17 1 1868.0632 P04147 P04147 383 399 PAB1 Polyadenylate-binding protein, cytoplasmic and nuclear yes yes 2 0.027356 94.82 1 483920 483920 217 19 217 328 412 412 0 NSYPASFYSVNTEK TSNHKSSVPGSAELRNSYPASFYSVNTEKK RNSYPASFYSVNTEKKTIEVTAEINCFMHL R N S E K K 1 0 2 0 0 0 1 0 0 0 0 1 0 1 1 3 1 0 2 1 0 0 14 0 1605.7311 P40016 P40016 112 125 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 1.9017E-16 288.61 1 25259000 25259000 218 39 218 329 413 413 1 NVLIEQPFGPPK TLAEAVAATLGPKGRNVLIEQPFGPPKITK KGRNVLIEQPFGPPKITKDGVTVAKSIVLK R N V P K I 0 0 1 0 0 1 1 1 0 1 1 1 0 1 3 0 0 0 0 1 0 0 12 0 1337.7343 P19882 P19882 58 69 HSP60 Heat shock protein 60, mitochondrial yes yes 2 0.0032412 139.31 1 1595000 1595000 219 25 219 330 414 414 1 NVQDAIADAEQR QRLQGEIAHVKKQCKNVQDAIADAEQRGEH QCKNVQDAIADAEQRGEHALKDARNKLNDL K N V Q R G 3 1 1 2 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 12 0 1328.6321 CON__P35908v2;CON__P35908 CON__P35908v2 419 430 yes no 2 0.00049682 166.11 1 6428400 6428400 + 220 13 220 331 415 415 1 PNDLVGVNK VFLPMVGLVDPDKLKPNDLVGVNKDSYLIL DPDKLKPNDLVGVNKDSYLILDTLPSEFDS K P N N K D 0 0 2 1 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 2 0 0 9 0 954.51345 P33297 P33297 142 150 RPT5 26S protease regulatory subunit 6A yes yes 2 0.0023856 143.37 1 26140000 26140000 221 31 221 332 416 416 1 PSMSVALHR YVVRILSTLDRELLKPSMSVALHRHSNALV DRELLKPSMSVALHRHSNALVDILPPDSDS K P S H R H 1 1 0 0 0 0 0 0 1 0 1 0 1 0 1 2 0 0 0 1 0 0 9 0 996.51748 P33298 P33298 133 141 RPT3 26S protease regulatory subunit 6B homolog yes yes 2 0.0007769 153.04 1 5029600 5029600 222 32 222 333 417 417 1 PTSEGMVGQLQAR SHITGLGLDENLQPRPTSEGMVGQLQARRA PRPTSEGMVGQLQARRAAGVILKMVQNGTI R P T A R R 1 1 0 0 0 2 1 2 0 0 1 0 1 0 1 1 1 0 0 1 0 0 13 0 1372.6769 Q12464 Q12464 39 51 RVB2 RuvB-like protein 2 yes yes 2 1.3559E-06 213.35 1 4119400 4119400 223 60 223 334 418 418 1 QEYDESGPSIVHHK ILASLTTFQQMWISKQEYDESGPSIVHHKC KQEYDESGPSIVHHKCF_____________ K Q E H K C 0 0 0 1 0 1 2 1 2 1 0 1 0 0 1 2 0 0 1 1 0 0 14 0 1624.7481 P60010 P60010 360 373 ACT1 Actin yes yes 2;3 0.00038028 158.06 2 4723200 4723200 224 50 224 335;336 419;420 419 2 QEYEQLIAK VAPGKDLTKTLNDMRQEYEQLIAKNRKDIE TLNDMRQEYEQLIAKNRKDIENQYETQITQ R Q E A K N 1 0 0 0 0 2 2 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 9 0 1120.5764 CON__P35527 CON__P35527 328 336 yes yes 2 0.0010603 150.36 1 22641000 22641000 + 225 12 225 337 421 421 1 QFTSSSSMK ______________________________ MTTCSRQFTSSSSMKGSCGIGGGIGGGSSR R Q F M K G 0 0 0 0 0 1 0 0 0 0 0 1 1 1 0 4 1 0 0 0 0 0 9 0 1001.4488 CON__P02533;CON__P08779;CON__Q9Z2K1;CON__Q3ZAW8 CON__P08779 7 15 no no 2 0.025649 99.136 1 5690100 5690100 + 226 3;9 226 338 422 422 1 QGVDADINGLR LDDFRIKFEMEQNLRQGVDADINGLRQVLD QNLRQGVDADINGLRQVLDNLTMEKSDLEM R Q G L R Q 1 1 1 2 0 1 0 2 0 1 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1156.5836 CON__P35527 CON__P35527 251 261 yes yes 2 0.0010323 150.81 1 12432000 12432000 + 227 12 227 339 423 423 1 QIEELVEAIVLPMK EKPTETYSDVGGLDKQIEELVEAIVLPMKR KQIEELVEAIVLPMKRADKFKDMGIRAPKG K Q I M K R 1 0 0 0 0 1 3 0 0 2 2 1 1 0 1 0 0 0 0 2 0 0 14 0 1610.8953 P33297 P33297 189 202 RPT5 26S protease regulatory subunit 6A yes yes 2;3 8.5698E-24 324.11 2 12972000 12972000 228 31 228 340;341 424;425 424 2 QISNLQQSISDAEQR RVIQRLRSEIDNVKKQISNLQQSISDAEQR QISNLQQSISDAEQRGENALKDAKNKLNDL K Q I Q R G 1 1 1 1 0 4 1 0 0 2 1 0 0 0 0 3 0 0 0 0 0 0 15 0 1715.8438 CON__P04264 CON__P04264 418 432 yes yes 2;3 1.3267E-32 364.53 2 48445000 48445000 + 229 8 229 342;343 426;427 426 2 QLALKDPNK TLASSNTDFAFSLYKQLALKDPNKNVMFSP AFSLYKQLALKDPNKNVMFSPLSVSMALAF K Q L N K N 1 0 1 1 0 1 0 0 0 0 2 2 0 0 1 0 0 0 0 0 0 0 9 1 1025.5869 CON__A2I7N0;CON__REFSEQ:XP_001252647;CON__A2I7N3 CON__A2I7N0 57 65 yes no 2 0.0025455 137.13 1 1743300 1743300 + 230 0 230 344 428 428 1 QLDSIVGER NLEPLFEQYINNLRRQLDSIVGERGRLDSE INNLRRQLDSIVGERGRLDSELRGMQDLVE R Q L E R G 0 1 0 1 0 1 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 9 0 1015.5298 CON__P02538;CON__P48668;CON__P04259;CON__P13647 CON__P02538 224 232 no no 2 0.0021207 144.77 1 5752700 5752700 + 231 4;11 231 345 429 429 1 QLHEISTSK HDGVNSIALFVGTDRQLHEISTSKKNNLEF FVGTDRQLHEISTSKKNNLEFGTYGKYVIA R Q L S K K 0 0 0 0 0 1 1 0 1 1 1 1 0 0 0 2 1 0 0 0 0 0 9 0 1041.5455 P53196 P53196 238 246 RPN14 26S proteasome regulatory subunit RPN14 yes yes 2 0.020363 117.53 1 0 0 232 48 232 346 430 430 1 QQGVGLPTDAYVAIEQVK KYTQNNPLLLIVDVKQQGVGLPTDAYVAIE VGLPTDAYVAIEQVKDDGTSTEKTFLHLPC K Q Q V K D 2 0 0 1 0 3 1 2 0 1 1 1 0 0 1 0 1 0 1 3 0 0 18 0 1915.0051 Q08723 Q08723 127 144 RPN8 26S proteasome regulatory subunit RPN8 yes yes 2 2.2241E-07 219.84 1 1302100 1302100 233 55 233 347 431 431 1 QQGVGLPTDAYVAIEQVKDDGTSTEK KYTQNNPLLLIVDVKQQGVGLPTDAYVAIE VAIEQVKDDGTSTEKTFLHLPCTIEAEEAE K Q Q E K T 2 0 0 3 0 3 2 3 0 1 1 2 0 0 1 1 3 0 1 3 0 0 26 1 2748.3454 Q08723 Q08723 127 152 RPN8 26S proteasome regulatory subunit RPN8 yes yes 3 0.003977 82.294 1 1427000 1427000 234 55 234 348 432 432 1 QRPAEIK ANADLEVKIRDWYQRQRPAEIKDYSPYFKT KIRDWYQRQRPAEIKDYSPYFKTIEDLRNK R Q R I K D 1 1 0 0 0 1 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 7 1 840.48175 CON__P02533 CON__P02533 154 160 yes yes 2 0.0022767 138.85 1 479590 479590 + 235 3 235 349 433 433 1 QSLGHGQHGSGSGQSPSPSR SGSSSSYGQHGSGSRQSLGHGQHGSGSGQS GQHGSGSGQSPSPSRGRHGSGSGQSSSYGP R Q S S R G 0 1 0 0 0 3 0 5 2 0 1 0 0 0 2 6 0 0 0 0 0 0 20 0 1946.8943 CON__Q86YZ3 CON__Q86YZ3 992 1011 yes no 3 0.011188 94.188 1 1456300 1456300 + 236 15 236 350 434 434 1 QTALVELLK ADICTLPDTEKQIKKQTALVELLKHKPKAT EKQIKKQTALVELLKHKPKATEEQLKTVME K Q T L K H 1 0 0 0 0 1 1 0 0 0 3 1 0 0 0 0 1 0 0 1 0 0 9 0 1013.6121 CON__P02769 CON__P02769 549 557 yes yes 2 2.6558E-06 209.21 1 33240000 33240000 + 237 7 237 351 435 435 1 QTENDLKDIEAR VLKSYGAAPYAAKLKQTENDLKDIEARIKE KLKQTENDLKDIEARIKEKAGVKESDTGLA K Q T A R I 1 1 1 2 0 1 2 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 12 1 1430.7001 P33299 P33299 51 62 RPT1 26S protease regulatory subunit 7 homolog yes yes 2;3 1.4051E-06 189.17 2 28336000 28336000 238 33 238 352;353 436;437 437 2 QTVFLPMVGLVDPDK NTAVGKAAVVKTSSRQTVFLPMVGLVDPDK QTVFLPMVGLVDPDKLKPNDLVGVNKDSYL R Q T D K L 0 0 0 2 0 1 0 1 0 0 2 1 1 1 2 0 1 0 0 3 0 0 15 0 1657.8749 P33297 P33297 125 139 RPT5 26S protease regulatory subunit 6A yes yes 2;3 2.4493E-16 273.08 2 69802000 69802000 239 31 239 354;355 438;439;440 438 3 QTVFLPMVGLVDPDKLKPNDLVGVNK NTAVGKAAVVKTSSRQTVFLPMVGLVDPDK DPDKLKPNDLVGVNKDSYLILDTLPSEFDS R Q T N K D 0 0 2 3 0 1 0 2 0 0 4 3 1 1 3 0 1 0 0 5 0 0 26 2 2835.5568 P33297 P33297 125 150 RPT5 26S protease regulatory subunit 6A yes yes 3 0.0032451 90.882 1 1319300 1319300 240 31 240 356 441 441 1 QVLDNLTMEK QNLRQGVDADINGLRQVLDNLTMEKSDLEM INGLRQVLDNLTMEKSDLEMQYETLQEELM R Q V E K S 0 0 1 1 0 1 1 0 0 0 2 1 1 0 0 0 1 0 0 1 0 0 10 0 1189.6013 CON__P35527 CON__P35527 262 271 yes yes 2 0.00080137 156.83 1 16840000 16840000 + 241 12 241 357 442 442 1 RADYTAVDTAK FLFNTIIRDGSKMLKRADYTAVDTAKLQMR KMLKRADYTAVDTAKLQMRRFILGTTEGDI K R A A K L 3 1 0 2 0 0 0 0 0 0 0 1 0 0 0 0 2 0 1 1 0 0 11 1 1209.599 P53196 P53196 93 103 RPN14 26S proteasome regulatory subunit RPN14 yes yes 2 0.0027808 141.91 1 3223200 3223200 242 48 242 358 443 443 1 RAQEEVKR DYIKDEQRHLKRELKRAQEEVKRIQSVPLV HLKRELKRAQEEVKRIQSVPLVIGQFLEPI K R A K R I 1 2 0 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 8 2 1014.557 P33298 P33298 81 88 RPT3 26S protease regulatory subunit 6B homolog yes yes 2 0.00022051 180.03 1 1223300 1223300 243 32 243 359 444 444 1 RFDAQTGSDR PSIIFIDEVDSIATKRFDAQTGSDREVQRI SIATKRFDAQTGSDREVQRILIELLTQMDG K R F D R E 1 2 0 2 0 1 0 1 0 0 0 0 0 1 0 1 1 0 0 0 0 0 10 1 1151.5319 P33298 P33298 281 290 RPT3 26S protease regulatory subunit 6B homolog yes yes 2 0.0037517 147.73 5 376650000 376650000 244 32 244 360;361;362;363;364 445;446;447;448;449 445 2 RFSEGTSADR PCIIFMDEVDAIGGRRFSEGTSADREIQRT AIGGRRFSEGTSADREIQRTLMELLTQMDG R R F D R E 1 2 0 1 0 0 1 1 0 0 0 0 0 1 0 2 1 0 0 0 0 0 10 1 1124.521 P53549 P53549 290 299 RPT4 26S protease subunit RPT4 yes yes 2 0.00014775 183.72 2 595320000 595320000 245 49 245 365;366 450;451 450 2 RFSEGTSADREIQR PCIIFMDEVDAIGGRRFSEGTSADREIQRT RRFSEGTSADREIQRTLMELLTQMDGFDNL R R F Q R T 1 3 0 1 0 1 2 1 0 1 0 0 0 1 0 2 1 0 0 0 0 0 14 2 1650.8074 P53549 P53549 290 303 RPT4 26S protease subunit RPT4 yes yes 3 0.016386 88.163 1 3403900 3403900 246 49 246 367 452 452 1 RHPEYAVSVLLR AKDAFLGSFLYEYSRRHPEYAVSVLLRLAK YSRRHPEYAVSVLLRLAKEYEATLEECCAK R R H L R L 1 2 0 0 0 0 1 0 1 0 2 0 0 0 1 1 0 0 1 2 0 0 12 1 1438.8045 CON__P02769 CON__P02769 360 371 yes yes 3 0.00023778 162.31 1 27367000 27367000 + 247 7 247 368 453 453 1 RLIFGTIASK DRKIEFPSLRDRRERRLIFGTIASKMSLAP DRRERRLIFGTIASKMSLAPEADLDSLIIR R R L S K M 1 1 0 0 0 0 0 1 0 2 1 1 0 1 0 1 1 0 0 0 0 0 10 1 1104.6655 P33298 P33298 350 359 RPT3 26S protease regulatory subunit 6B homolog yes yes 2;3 0.00042315 160.75 2 349460000 349460000 248 32 248 369;370 454;455 454 2 RRVDQLK HNLEPYFESFINNLRRRVDQLKSDQSRLDS ESFINNLRRRVDQLKSDQSRLDSELKNMQD R R R L K S 0 2 0 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 7 2 913.54575 CON__P04264 CON__P04264 240 246 yes yes 2 0.0059846 89.369 1 0 0 + 249 8 249 371 456 456 1 RSVHEPVQTGLK GRSRAQVKAPGILPRRSVHEPVQTGLKAVD LPRRSVHEPVQTGLKAVDALVPIGRGQREL R R S L K A 0 1 0 0 0 1 1 1 1 0 1 1 0 0 1 1 1 0 0 2 0 0 12 1 1349.7415 P07251 P07251 177 188 ATP1 ATP synthase subunit alpha, mitochondrial yes yes 3 0.014906 84.169 1 2558400 2558400 250 20 250 372 457 457 1 RVHTLLTLIVR FDWFIKTRTVHELSKRVHTLLTLIVREYEQ ELSKRVHTLLTLIVREYEQPDANKKKRSRT K R V V R E 0 2 0 0 0 0 0 0 1 1 3 0 0 0 0 0 2 0 0 2 0 0 11 1 1319.8401 Q08773 Q08773 1047 1057 ISW2 ISWI chromatin-remodeling complex ATPase ISW2 yes yes 2 0.012836 112.41 1 0 0 251 56 251 373 458 458 27;28 0 RVIEHNLR FGGEANKHHWEDLQKRVIEHNLRVISEYYS HWEDLQKRVIEHNLRVISEYYSRITLLRLN K R V L R V 0 2 1 0 0 0 1 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 8 1 1035.5938 Q12250 Q12250 344 351 RPN5 26S proteasome regulatory subunit RPN5 yes yes 2 0.00051974 158.07 1 2963300 2963300 252 57 252 374 459 459 1 RYDDQLK NKALNQFKRKLLEHRRYDDQLKQRRQNIRD KRKLLEHRRYDDQLKQRRQNIRDLEKLYDK R R Y L K Q 0 1 0 2 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 7 1 936.46649 P53549 P53549 69 75 RPT4 26S protease subunit RPT4 yes yes 2 0.00035405 161.9 5 1251800000 1251800000 253 49 253 375;376;377;378;379 460;461;462;463;464;465;466;467;468;469;470;471 460 12 RYQSHKSR PSSGTTNAQPRQTTRRYQSHKSRPAFVNKL QPRQTTRRYQSHKSRPAFVNKLWSMLNDDS R R Y S R P 0 2 0 0 0 1 0 0 1 0 0 1 0 0 0 2 0 0 1 0 0 0 8 2 1060.5526 P10961 P10961 165 172 HSF1 Heat shock factor protein yes yes 2 0.014698 63.565 1 0 0 254 23 254 380 472 472 0 0 SEIDHVKK KQEIAEINRMIQRLRSEIDHVKKQCANLQA RMIQRLRSEIDHVKKQCANLQAAIADAEQR R S E K K Q 0 0 0 1 0 0 1 0 1 1 0 2 0 0 0 1 0 0 0 1 0 0 8 1 954.51345 CON__P02538;CON__P48668;CON__P04259 CON__P02538 393 400 no no 2 0.0038322 138.83 1 0 0 + 255 4 255 381 473 473 1 SEIDNVKK KIEISELNRVIQRLRSEIDNVKKQISNLQQ RVIQRLRSEIDNVKKQISNLQQSISDAEQR R S E K K Q 0 0 1 1 0 0 1 0 0 1 0 2 0 0 0 1 0 0 0 1 0 0 8 1 931.49746 CON__P04264 CON__P04264 410 417 no no 2 0.00025635 174.16 1 16555000 16555000 + 256 8 256 382 474 474 1 SEISELRR NREVATNSELVQSGKSEISELRRTMQNLEI ELVQSGKSEISELRRTMQNLEIELQSQLSM K S E R R T 0 2 0 0 0 0 2 0 0 1 1 0 0 0 0 2 0 0 0 0 0 0 8 1 988.53016 CON__P02533 CON__P02533 329 336 no no 2 0.0062411 123.69 1 4363000 4363000 + 257 3 257 383 475 475 1 SGGGGGGGLGSGGSIR ______________________________ GGGGGGGLGSGGSIRSSYSRFSSSGGRGGG R S G I R S 0 1 0 0 0 0 0 10 0 1 1 0 0 0 0 3 0 0 0 0 0 0 16 0 1231.5905 CON__P35527 CON__P35527 14 29 yes yes 2 1.791E-06 217.12 1 44795000 44795000 + 258 12 258 384 476 476 1 SIIAFDDLIENK TNDELMVIYISNLVRSIIAFDDLIENKIQN LVRSIIAFDDLIENKIQNKKIQEQRVKDKQ R S I N K I 1 0 1 2 0 0 1 0 0 3 1 1 0 1 0 1 0 0 0 0 0 0 12 0 1376.7187 Q08723 Q08723 284 295 RPN8 26S proteasome regulatory subunit RPN8 yes yes 2 8.3539E-16 280.09 1 3110400 3110400 259 55 259 385 477 477 1 SKAEAESLYQSK IIAEVKAQNEDIAQKSKAEAESLYQSKYEE AQKSKAEAESLYQSKYEELQITAGRHGDSV K S K S K Y 2 0 0 0 0 1 2 0 0 0 1 2 0 0 0 3 0 0 1 0 0 0 12 1 1339.662 CON__P04264 CON__P04264 365 376 yes yes 2;3 5.6325E-16 289.59 2 63164000 63164000 + 260 8 260 386;387 478;479 478 2 SKEEAEALYHSK IIAEVKAQYEEIAQRSKEEAEALYHSKYEE AQRSKEEAEALYHSKYEELQVTVGRHGDSL R S K S K Y 2 0 0 0 0 0 3 0 1 0 1 2 0 0 0 2 0 0 1 0 0 0 12 1 1390.6729 CON__P35908v2;CON__P35908 CON__P35908v2 363 374 yes no 2;3 9.9281E-16 265 2 10753000 10753000 + 261 13 261 388;389 480;481 481 2 SLDLDSIIAEVK QISETNVILSMDNNRSLDLDSIIAEVKAQN NNRSLDLDSIIAEVKAQNEDIAQKSKAEAE R S L V K A 1 0 0 2 0 0 1 0 0 2 2 1 0 0 0 2 0 0 0 1 0 0 12 0 1301.7078 CON__P04264 CON__P04264 344 355 no no 2 1.013E-15 275.28 1 4413700 4413700 + 262 8 262 390 482 482 1 SLDLNTR QYMIQKVMEYLKSSKSLDLNTRISVIETIR MEYLKSSKSLDLNTRISVIETIRVVTENKI K S L T R I 0 1 1 1 0 0 0 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 7 0 817.42938 Q12250 Q12250 109 115 RPN5 26S proteasome regulatory subunit RPN5 yes yes 1;2 0.0040459 134.81 2 53453000 53453000 263 57 263 391;392 483;484 483 1 SLGFLQQSNK EYIIAAIRKAPHNSKSLGFLQQSNKLHCCI PHNSKSLGFLQQSNKLHCCIQLLMGDIPEL K S L N K L 0 0 1 0 0 2 0 1 0 0 2 1 0 1 0 2 0 0 0 0 0 0 10 0 1120.5877 P40016 P40016 306 315 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 5.2979E-10 244.8 1 72174000 72174000 264 39 264 393 485 485 1 SLLDFNTALK GIDAMKAVAEAYNNRSLLDFNTALKQYEKE AYNNRSLLDFNTALKQYEKELMGDELTRSH R S L L K Q 1 0 1 1 0 0 0 0 0 0 3 1 0 1 0 1 1 0 0 0 0 0 10 0 1120.6128 Q12377 Q12377 310 319 RPN6 26S proteasome regulatory subunit RPN6 yes yes 2 1.2269E-06 218.58 1 5567600 5567600 265 58 265 394 486 486 1 SLLEGEGSSGGGGR LDIKIRLENEIQTYRSLLEGEGSSGGGGRG RSLLEGEGSSGGGGRGGGSFGGGYGGGSSG R S L G R G 0 1 0 0 0 0 2 6 0 0 2 0 0 0 0 3 0 0 0 0 0 0 14 0 1261.5899 CON__P13645 CON__P13645 451 464 yes yes 2 2.1807E-10 238.86 1 33250000 33250000 + 266 10 266 395 487 487 1 SLLPYYHLTK DIPELSFFHQSNMQKSLLPYYHLTKAVKLG SNMQKSLLPYYHLTKAVKLGDLKKFTSTIT K S L T K A 0 0 0 0 0 0 0 0 1 0 3 1 0 0 1 1 1 0 2 0 0 0 10 0 1233.6758 P40016 P40016 341 350 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 0.0077439 114.97 1 19173000 19173000 267 39 267 396 488 488 1 SLNLINAK RKVVIPNLLCYYNLRSLNLINAKLWFYIYL LCYYNLRSLNLINAKLWFYIYLSHETLARS R S L A K L 1 0 2 0 0 0 0 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 8 0 871.51272 P40016 P40016 175 182 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 0.0071165 118.74 1 37997000 37997000 268 39 268 397 489 489 1 SLNNQFASFIDK PEIQKVKSREREQIKSLNNQFASFIDKVRF QIKSLNNQFASFIDKVRFLEQQNQVLQTKW K S L D K V 1 0 2 1 0 1 0 0 0 1 1 1 0 2 0 2 0 0 0 0 0 0 12 0 1382.683 CON__P04264 CON__P04264 186 197 no no 2 2.2435E-16 296.65 1 25493000 25493000 + 269 8 269 398 490 490 1 SLSMKNSR SSVPRASLSLQAVRKSLSMKNSRTRDPEKQ SLQAVRKSLSMKNSRTRDPEKQIDSIDQFL K S L S R T 0 1 1 0 0 0 0 0 0 0 1 1 1 0 0 3 0 0 0 0 0 0 8 1 921.4702 Q12674 Q12674 917 924 DNF3 Probable phospholipid-transporting ATPase DNF3 yes yes 2 0.015769 108.09 1 0 0 270 62 270 399 491 491 12;13 0 SLYNLGGSK VSLAGACGVGGYGSRSLYNLGGSKRISIST GGYGSRSLYNLGGSKRISISTSGGSFRNRF R S L S K R 0 0 1 0 0 0 0 2 0 0 2 1 0 0 0 2 0 0 1 0 0 0 9 0 937.4869 CON__P13647 CON__P13647 64 72 no no 2 0.024597 100.02 1 3196800 3196800 + 271 11 271 400 492 492 1 SNNDSIYHALR AFSQLWTFFVRLFIKSNNDSIYHALRVGVA LFIKSNNDSIYHALRVGVAIENVLFYLSGI K S N L R V 1 1 2 1 0 0 0 0 1 1 1 0 0 0 0 2 0 0 1 0 0 0 11 0 1288.616 P38211 P38211 99 109 GPI18 GPI mannosyltransferase 2 yes yes 2 0.018952 93.429 1 0 0 272 35 272 401 493 493 4 0 SNQNSSTPYK CFINYYKKSRQTDQKSNQNSSTPYKQSQRQ QTDQKSNQNSSTPYKQSQRQVPHSIK____ K S N Y K Q 0 0 2 0 0 1 0 0 0 0 0 1 0 0 1 3 1 0 1 0 0 0 10 0 1124.5098 Q12411 Q12411 589 598 SPO21 Sporulation-specific protein 21 yes yes 2 0.02096 80.455 1 0 0 273 59 273 402 494 494 11 0 SPTESYSDIGGLESQIQEIK QDDADPMVSVMKMDKSPTESYSDIGGLESQ YSDIGGLESQIQEIKESVELPLTHPELYEE K S P I K E 0 0 0 1 0 2 3 2 0 3 1 1 0 0 1 4 1 0 1 0 0 0 20 0 2180.0485 P40327 P40327 176 195 RPT2 26S protease regulatory subunit 4 homolog yes yes 2;3 1.3944E-34 345.25 2 7943600 7943600 274 40 274 403;404 495;496 495 2 SPTRARLLEK WSDEKIEGWCRMLERSPTRARLLEKKFMFK RMLERSPTRARLLEKKFMFKGNSKTGKTSY R S P E K K 1 2 0 0 0 0 1 0 0 0 2 1 0 0 1 1 1 0 0 0 0 0 10 2 1169.6881 P53137 P53137 529 538 CUE3 CUE domain-containing protein 3 yes yes 3 0.0047172 110.76 1 0 0 275 47 275 405 497 497 9;24 0 SQEAQSRIK HLQEFIDKYRYNAAKSQEAQSRIKKLEKLP RYNAAKSQEAQSRIKKLEKLPVLEPPEQDK K S Q I K K 1 1 0 0 0 2 1 0 0 1 0 1 0 0 0 2 0 0 0 0 0 0 9 1 1045.5516 P43535 P43535 492 500 GCN20 Protein GCN20 yes yes 2 0.014889 89.752 2 0 0 276 43 276 406;407 498;499 499 7 0 SQEVEYVDPTVNR ______________________________ EKSQEVEYVDPTVNRVPNYEVSEKAFLLTQ K S Q N R V 0 1 1 1 0 1 2 0 0 0 0 0 0 0 1 1 1 0 1 3 0 0 13 0 1534.7264 Q06103 Q06103 8 20 RPN7 26S proteasome regulatory subunit RPN7 yes yes 2 1.7955E-16 293.31 1 3888500 3888500 277 54 277 408 500 500 1 SQYEQLAEQNR AAPGVDLTQLLNNMRSQYEQLAEQNRKDAE NNMRSQYEQLAEQNRKDAEAWFNEKSKELT R S Q N R K 1 1 1 0 0 3 2 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 11 0 1364.6321 CON__P13645 CON__P13645 323 333 yes yes 2 2.1064E-31 345.81 1 24218000 24218000 + 278 10 278 409 501 501 1 SQYEQLAEQNRK AAPGVDLTQLLNNMRSQYEQLAEQNRKDAE NMRSQYEQLAEQNRKDAEAWFNEKSKELTT R S Q R K D 1 1 1 0 0 3 2 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 12 1 1492.727 CON__P13645 CON__P13645 323 334 yes yes 2;3 0.00015894 195.83 2 29807000 29807000 + 279 10 279 410;411 502;503 503 2 SSEEINSDNQNIILR KLWFYIYLSHETLARSSEEINSDNQNIILR SSEEINSDNQNIILRSTMMKFLKIASLKHD R S S L R S 0 1 3 1 0 1 2 0 0 3 1 0 0 0 0 3 0 0 0 0 0 0 15 0 1730.8435 P40016 P40016 197 211 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2;3 1.476E-10 273.24 2 121960000 121960000 280 39 280 412;413 504;505 504 2 SSVPGSAELR SFKKNLLKFITSNHKSSVPGSAELRNSYPA TSNHKSSVPGSAELRNSYPASFYSVNTEKK K S S L R N 1 1 0 0 0 0 1 1 0 0 1 0 0 0 1 3 0 0 0 1 0 0 10 0 1001.5142 P40016 P40016 102 111 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 0.00575 125.71 1 104820000 104820000 281 39 281 414 506 506 1 STDEFNGAQLK KMTTDDDINWQELARSTDEFNGAQLKAVTV ELARSTDEFNGAQLKAVTVEAGMIALRNGQ R S T L K A 1 0 1 1 0 1 1 1 0 0 1 1 0 1 0 1 1 0 0 0 0 0 11 0 1208.5673 P33297 P33297 382 392 RPT5 26S protease regulatory subunit 6A yes yes 2 7.9649E-05 212.03 2 0 0 282 31 282 415;416 507;508 507 2 STLAALAPAFTK NSLNDDYEKKHDLLKSTLAALAPAFTKKDA LLKSTLAALAPAFTKKDAEFVEAGVTKSCL K S T T K K 4 0 0 0 0 0 0 0 0 0 2 1 0 1 1 1 2 0 0 0 0 0 12 0 1189.6707 Q03661 Q03661 731 742 ESC1 Silent chromatin protein ESC1 yes yes 2 0.0050971 129.88 1 2259400 2259400 283 53 283 417 509 509 1 STMQELNSR GAGGGDGGILTANEKSTMQELNSRLASYLD LTANEKSTMQELNSRLASYLDKVQALEEAN K S T S R L 0 1 1 0 0 1 1 0 0 0 1 0 1 0 0 2 1 0 0 0 0 0 9 0 1064.4921 CON__P35527 CON__P35527 155 163 yes yes 2 3.8946E-10 257.27 1 26523000 26523000 + 284 12 284 418 510 510 1 SVHEPVQTGLK RSRAQVKAPGILPRRSVHEPVQTGLKAVDA LPRRSVHEPVQTGLKAVDALVPIGRGQREL R S V L K A 0 0 0 0 0 1 1 1 1 0 1 1 0 0 1 1 1 0 0 2 0 0 11 0 1193.6404 P07251 P07251 178 188 ATP1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.0079084 114.89 1 4366400 4366400 285 20 285 419 511 511 1 SYELPDGQVITIGNER EQEMQTAAQSSSIEKSYELPDGQVITIGNE YELPDGQVITIGNERFRAPEALFHPSVLGL K S Y E R F 0 1 1 1 0 1 2 2 0 2 1 0 0 0 1 1 1 0 1 1 0 0 16 0 1789.8846 P60010 P60010 239 254 ACT1 Actin yes yes 2 2.462E-07 222.56 1 984380 984380 286 50 286 420 512 512 1 SYGAAPYAAK DKIVPLTEGDIQVLKSYGAAPYAAKLKQTE IQVLKSYGAAPYAAKLKQTENDLKDIEARI K S Y A K L 4 0 0 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 2 0 0 0 10 0 997.4869 P33299 P33299 39 48 RPT1 26S protease regulatory subunit 7 homolog yes yes 2 0.017186 117.04 1 0 0 287 33 287 421 513 513 1 SYNEQEIK LPLDLLDRSIIITTKSYNEQEIKTILSIRA SIIITTKSYNEQEIKTILSIRAQEEEVELS K S Y I K T 0 0 1 0 0 1 2 0 0 1 0 1 0 0 0 1 0 0 1 0 0 0 8 0 1009.4716 Q12464 Q12464 358 365 RVB2 RuvB-like protein 2 yes yes 2 0.0002719 172.94 1 11336000 11336000 288 60 288 422 514 514 1 TAEQLENLNIQDDQK ______________________________ TAEQLENLNIQDDQKQAATGSESQSVENSS K T A Q K Q 1 0 2 2 0 3 2 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 15 0 1757.8432 P04147 P04147 8 22 PAB1 Polyadenylate-binding protein, cytoplasmic and nuclear yes yes 2 2.4432E-24 332.56 1 2970400 2970400 289 19 289 423 515 515 1 TASGNIIPSSTGAAK KTVDGPSHKDWRGGRTASGNIIPSSTGAAK TASGNIIPSSTGAAKAVGKVLPELQGKLTG R T A A K A 3 0 1 0 0 0 0 2 0 2 0 1 0 0 1 3 2 0 0 0 0 0 15 0 1373.7151 P00360;P00359;P00358 P00360 199 213 TDH1;TDH3;TDH2 Glyceraldehyde-3-phosphate dehydrogenase 1;Glyceraldehyde-3-phosphate dehydrogenase 3;Glyceraldehyde-3-phosphate dehydrogenase 2 yes no 2 0.010752 115.37 1 2935800 2935800 290 16 290 424 516 516 1 TAVALDTILNQK RGQRELIIGDRQTGKTAVALDTILNQKRWN TGKTAVALDTILNQKRWNNGSDESKKLYCV K T A Q K R 2 0 1 1 0 1 0 0 0 1 2 1 0 0 0 0 2 0 0 1 0 0 12 0 1285.7242 P07251 P07251 213 224 ATP1 ATP synthase subunit alpha, mitochondrial yes yes 2 7.4557E-17 300.71 1 5407000 5407000 291 20 291 425 517 517 1 TDNTVDKFDFYK ILQSDLEEAYATQVKTDNTVDKFDFYK___ QVKTDNTVDKFDFYK_______________ K T D Y K - 0 0 1 3 0 0 0 0 0 0 0 2 0 2 0 0 2 0 1 1 0 0 12 1 1491.6882 P33298 P33298 417 428 RPT3 26S protease regulatory subunit 6B homolog yes yes 2;3 0.00055082 148.89 7 791460000 791460000 292 32 292 426;427;428;429;430;431;432 518;519;520;521;522;523;524;525;526;527;528;529;530;531;532 520 14 TEALTQAFR TAIAGSEIFSLELSKTEALTQAFRKSIGIK SLELSKTEALTQAFRKSIGIKIKEETELIE K T E F R K 2 1 0 0 0 1 1 0 0 0 1 0 0 1 0 0 2 0 0 0 0 0 9 0 1035.5349 Q12464 Q12464 114 122 RVB2 RuvB-like protein 2 yes yes 2 3.3317E-06 204.62 1 13158000 13158000 293 60 293 433 533 533 1 TEELNKEVASNSELVQSSR AEKNRRDAETWFLSKTEELNKEVASNSELV NKEVASNSELVQSSRSEVTELRRVLQGLEI K T E S R S 1 1 2 0 0 1 4 0 0 0 2 1 0 0 0 4 1 0 0 2 0 0 19 1 2119.0393 CON__P08779 CON__P08779 312 330 yes yes 3 3.0584E-07 189.56 1 2378900 2378900 + 294 9 294 434 534 534 1 TGEFDFEAAVK GRLEIFKIHTAKVKKTGEFDFEAAVKMSDG KVKKTGEFDFEAAVKMSDGFNGADIRNCAT K T G V K M 2 0 0 1 0 0 2 1 0 0 0 1 0 2 0 0 1 0 0 1 0 0 11 0 1212.5663 P53549 P53549 371 381 RPT4 26S protease subunit RPT4 yes yes 2 0.00023963 179.1 3 867990000 867990000 295 49 295 435;436;437 535;536;537;538 536 4 TGNIVDVPVGPGLLGR FGSDRLVKEGELVKRTGNIVDVPVGPGLLG GNIVDVPVGPGLLGRVVDALGNPIDGKGPI R T G G R V 0 1 1 1 0 0 0 4 0 1 2 0 0 0 2 0 1 0 0 3 0 0 16 0 1562.878 P07251 P07251 128 143 ATP1 ATP synthase subunit alpha, mitochondrial yes yes 2 5.4909E-07 216.83 1 3515500 3515500 296 20 296 438 539 539 1 TGVETSLR EEVELSSDALDLLTKTGVETSLRYSSNLIS ALDLLTKTGVETSLRYSSNLISVAQQIAMK K T G L R Y 0 1 0 0 0 0 1 1 0 0 1 0 0 0 0 1 2 0 0 1 0 0 8 0 861.4556 Q12464 Q12464 390 397 RVB2 RuvB-like protein 2 yes yes 2 0.00014321 180.93 1 13368000 13368000 297 60 297 439 540 540 1 TIAMDGTEGLVR LVLEVAQHLGENTVRTIAMDGTEGLVRGEK TVRTIAMDGTEGLVRGEKVLDTGGPISVPV R T I V R G 1 1 0 1 0 0 1 2 0 1 1 0 1 0 0 0 2 0 0 1 0 0 12 0 1261.6336 P00830 P00830 94 105 ATP2 ATP synthase subunit beta, mitochondrial yes yes 2 8.6696E-07 219.5 1 23894000 23894000 298 17 298 440 541 541 1 TLLDIDNTR DLKDQIVDLTVGNNKTLLDIDNTRMTLDDF TVGNNKTLLDIDNTRMTLDDFRIKFEMEQN K T L T R M 0 1 1 2 0 0 0 0 0 1 2 0 0 0 0 0 2 0 0 0 0 0 9 0 1059.556 CON__P35527 CON__P35527 225 233 yes yes 2 0.0010783 150.27 1 33329000 33329000 + 299 12 299 441 542 542 1 TLLEGEESR MNTKLALDLEIATYRTLLEGEESRMSGECA EIATYRTLLEGEESRMSGECAPNVSVSVST R T L S R M 0 1 0 0 0 0 3 1 0 0 2 0 0 0 0 1 1 0 0 0 0 0 9 0 1032.5088 CON__P04264 CON__P04264 484 492 no no 2 0.00018753 180.87 1 46767000 46767000 + 300 8 300 442 543;544 544 2 TLMELLTQMDGFDNLGQTK RRFSEGTSADREIQRTLMELLTQMDGFDNL LLTQMDGFDNLGQTKIIMATNRPDTLDPAL R T L T K I 0 0 1 2 0 2 1 2 0 0 4 1 2 1 0 0 3 0 0 0 0 0 19 0 2154.0337 P53549 P53549 304 322 RPT4 26S protease subunit RPT4 yes yes 2;3 2.8343E-34 358.01 2 1116800 1116800 301 49 301 443;444 545;546 545 2 TMLELLNQLDGFSSDDR KRFDSEKSGDREVQRTMLELLNQLDGFSSD LELLNQLDGFSSDDRVKVLAATNRVDVLDP R T M D R V 0 1 1 3 0 1 1 1 0 0 4 0 1 1 0 2 1 0 0 0 0 0 17 0 1952.915 P33297 P33297 304 320 RPT5 26S protease regulatory subunit 6A yes yes 2;3 5.9567E-34 420.87 3 4785500 4785500 302 31 302 445;446;447 547;548;549 547 3 TMLELLNQLDGFSSDDRVK KRFDSEKSGDREVQRTMLELLNQLDGFSSD LLNQLDGFSSDDRVKVLAATNRVDVLDPAL R T M V K V 0 1 1 3 0 1 1 1 0 0 4 1 1 1 0 2 1 0 0 1 0 0 19 1 2180.0783 P33297 P33297 304 322 RPT5 26S protease regulatory subunit 6A yes yes 3 0.0018683 122.97 1 453550 453550 303 31 303 448 550 550 1 TNAENEFVTIK VEDYRNKYEDEINKRTNAENEFVTIKKDVD INKRTNAENEFVTIKKDVDGAYMTKVDLQA R T N I K K 1 0 2 0 0 0 2 0 0 1 0 1 0 1 0 0 2 0 0 1 0 0 11 0 1264.6299 CON__P04264 CON__P04264 278 288 yes yes 2 2.4112E-06 208.15 1 51833000 51833000 + 304 8 304 449 551 551 1 TQGFLALFTGDTGEIR VHTVSLHEIDVINSRTQGFLALFTGDTGEI QGFLALFTGDTGEIRSEVRDQINTKVAEWK R T Q I R S 1 1 0 1 0 1 1 3 0 1 2 0 0 2 0 0 3 0 0 0 0 0 16 0 1724.8733 Q12464 Q12464 251 266 RVB2 RuvB-like protein 2 yes yes 2 9.125E-17 275.82 1 552030 552030 305 60 305 450 552 552 1 TREGNDLYR KAHGGFSVFTGVGERTREGNDLYREMKETG TGVGERTREGNDLYREMKETGVINLEGESK R T R Y R E 0 2 1 1 0 0 1 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 9 1 1122.5418 P00830 P00830 224 232 ATP2 ATP synthase subunit beta, mitochondrial yes yes 2 0.014522 103.56 1 1716900 1716900 306 17 306 451 553 553 1 TRLEQEIATYR MEQQSQEYQILLDVKTRLEQEIATYRRLLE LDVKTRLEQEIATYRRLLEGEDAHLSSQQA K T R Y R R 1 2 0 0 0 1 2 0 0 1 1 0 0 0 0 0 2 0 1 0 0 0 11 1 1378.7205 CON__P02533;CON__Q6IFX2;CON__P19012;CON__A2A4G1;CON__Q61782;CON__ENSEMBL:ENSP00000377550;CON__P08730-1;CON__P13646-1;CON__P35900;CON__Q9D312;CON__P08779;CON__Q9Z2K1;CON__Q3ZAW8 CON__P08779 408 418 no no 2 2.8298E-06 195.83 1 6279500 6279500 + 307 3;9 307 452 554;555 554 2 TRLKYLTDGMLLR QVGYSVRFDNTTTTRTRLKYLTDGMLLREL TRTRLKYLTDGMLLRELMMNSDLREYSVIV R T R L R E 0 2 0 1 0 0 0 1 0 0 4 1 1 0 0 0 2 0 1 0 0 0 13 2 1578.8916 P36009 P36009 174 186 DHR2 Probable ATP-dependent RNA helicase DHR2 yes yes 3 0.011464 93.345 1 0 0 308 34 308 453 556 556 20 0 TSQNSELNNMQDLVEDYKK IDSLKRYLDGLTAERTSQNSELNNMQDLVE SELNNMQDLVEDYKKKYEDEINKRTAAEND R T S K K K 0 0 3 2 0 2 2 0 0 0 2 2 1 0 0 2 1 0 1 1 0 0 19 1 2255.0376 CON__P35908v2;CON__P35908 CON__P35908v2 248 266 yes no 3 0.028575 43.752 1 1755100 1755100 + 309 13 309 454 557 557 1 TSRTAQKLK NPTSKQSRTGSGAQRTSRTAQKLKLLPEEP GSGAQRTSRTAQKLKLLPEEPFQRDSERLT R T S L K L 1 1 0 0 0 1 0 0 0 0 1 2 0 0 0 1 2 0 0 0 0 0 9 2 1031.6087 Q03441 Q03441 70 78 RMD1 Sporulation protein RMD1 yes yes 2 0.022023 78.77 1 0 0 310 52 310 455 558 558 10;25;26 0 TTAENEFVMLK VEDFKNKYEDEINKRTTAENEFVMLKKDVD INKRTTAENEFVMLKKDVDAAYMNKVELEA R T T L K K 1 0 1 0 0 0 2 0 0 0 1 1 1 1 0 0 2 0 0 1 0 0 11 0 1281.6275 CON__P13647 CON__P13647 266 276 no no 2 0.00016347 182.46 1 2030000 2030000 + 311 11 311 456 559 559 1 TTDMETIYELGNK RSITGGHKQGKLTIKTTDMETIYELGNKMI IKTTDMETIYELGNKMIDGLTKEKVLAGDV K T T N K M 0 0 1 1 0 0 2 1 0 1 1 1 1 0 0 0 3 0 1 0 0 0 13 0 1513.697 Q12464 Q12464 162 174 RVB2 RuvB-like protein 2 yes yes 2 4.0634E-16 281.41 1 2463600 2463600 312 60 312 457 560 560 1 TVFIQELINNIAK RGGKIGLFGGAGVGKTVFIQELINNIAKAH GKTVFIQELINNIAKAHGGFSVFTGVGERT K T V A K A 1 0 2 0 0 1 1 0 0 3 1 1 0 1 0 0 1 0 0 1 0 0 13 0 1501.8504 P00830 P00830 197 209 ATP2 ATP synthase subunit beta, mitochondrial yes yes 2 1.3566E-10 252.97 1 1372300 1372300 313 17 313 458 561 561 1 TVMENFVAFVDK ELLKHKPKATEEQLKTVMENFVAFVDKCCA QLKTVMENFVAFVDKCCAADDKEACFAVEG K T V D K C 1 0 1 1 0 0 1 0 0 0 0 1 1 2 0 0 1 0 0 3 0 0 12 0 1398.6853 CON__P02769 CON__P02769 569 580 yes yes 2 5.4607E-10 229.68 1 1897400 1897400 + 314 7 314 459 562 562 1 TYEPVLNEDDLAFGGEANK LFTTNELMRWPIVQKTYEPVLNEDDLAFGG VLNEDDLAFGGEANKHHWEDLQKRVIEHNL K T Y N K H 2 0 2 2 0 0 3 2 0 0 2 1 0 1 1 0 1 0 1 1 0 0 19 0 2080.9589 Q12250 Q12250 317 335 RPN5 26S proteasome regulatory subunit RPN5 yes yes 3 6.5714E-08 220.97 1 7997300 7997300 315 57 315 460 563 563 1 VAESTQVLELPFK SVLMMYQESKFRYRRVAESTQVLELPFKGD RRVAESTQVLELPFKGDDITMVLILPKLEK R V A F K G 1 0 0 0 0 1 2 0 0 0 2 1 0 1 1 1 1 0 0 2 0 0 13 0 1459.7922 CON__P41361 CON__P41361 296 308 yes yes 2 3.7076E-10 232.17 1 1410700 1410700 + 316 14 316 461 564 564 1 VAGENAPSIVFIDEIDAIGTK KYLGDGPRLCRQIFKVAGENAPSIVFIDEI PSIVFIDEIDAIGTKRYDSNSGGEREIQRT K V A T K R 3 0 1 2 0 0 2 2 0 4 0 1 0 1 1 1 1 0 0 2 0 0 21 0 2158.1158 P40327 P40327 270 290 RPT2 26S protease regulatory subunit 4 homolog yes yes 2;3 3.1601E-13 252.37 2 706360 706360 317 40 317 462;463 565;566 565 2 VALTGLTIAEYFR LVFGQMNEPPGARARVALTGLTIAEYFRDE ARVALTGLTIAEYFRDEEGQDVLLFIDNIF R V A F R D 2 1 0 0 0 0 1 1 0 1 2 0 0 1 0 0 2 0 1 1 0 0 13 0 1452.7977 P00830 P00830 265 277 ATP2 ATP synthase subunit beta, mitochondrial yes yes 2 7.0445E-16 265.77 1 391590 391590 318 17 318 464 567 567 1 VALVFGQMNEPPGAR EMKETGVINLEGESKVALVFGQMNEPPGAR VALVFGQMNEPPGARARVALTGLTIAEYFR K V A A R A 2 1 1 0 0 1 1 2 0 0 1 0 1 1 2 0 0 0 0 2 0 0 15 0 1584.8082 P00830 P00830 248 262 ATP2 ATP synthase subunit beta, mitochondrial yes yes 2 2.5306E-16 272.1 1 12341000 12341000 319 17 319 465 568 568 1 VATAVLSTTAR YPRMYEEASGKEVEKVATAVLSTTARAKAR EVEKVATAVLSTTARAKARAKKTKKEKGPN K V A A R A 3 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 3 0 0 2 0 0 11 0 1088.619 P32565 P32565 799 809 RPN2 26S proteasome regulatory subunit RPN2 yes yes 2 3.856E-05 187.97 1 16070000 16070000 320 29 320 466 569 569 1 VATEKDFLK VCTEAGMFAIRARRKVATEKDFLKAVDKVI IRARRKVATEKDFLKAVDKVISGYKKFSST K V A L K A 1 0 0 1 0 0 1 0 0 0 1 2 0 1 0 0 1 0 0 1 0 0 9 1 1049.5757 P33299 P33299 437 445 RPT1 26S protease regulatory subunit 7 homolog yes yes 2 0.0011717 147.29 1 4672100 4672100 321 33 321 467 570 570 1 VATVSLPR IMLIKLSSPATLNSRVATVSLPRSCAAAGT PATLNSRVATVSLPRSCAAAGTECLISGWG R V A P R S 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 2 0 0 8 0 841.50215 CON__P00761 CON__P00761 108 115 yes yes 2 0.02772 98.458 1 8172300 8172300 + 322 2 322 468 571 571 1 VDDSVDPLFK LSLNKIKREAKHVDKVDDSVDPLFKSSAFP KHVDKVDDSVDPLFKSSAFPQSPIRAYGST K V D F K S 0 0 0 3 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 2 0 0 10 0 1133.5605 P53094 P53094 1371 1380 MDS3 Negative regulator of sporulation MDS3 yes yes 2 0.014982 62.2 1 0 0 323 46 323 469 572 572 8 0 VDPEQEAHNK QPQETEEHHEEEPSRVDPEQEAHNKALNQF EEPSRVDPEQEAHNKALNQFKRKLLEHRRY R V D N K A 1 0 1 1 0 1 2 0 1 0 0 1 0 0 1 0 0 0 0 1 0 0 10 0 1165.5364 P53549 P53549 46 55 RPT4 26S protease subunit RPT4 yes yes 1;2 0.0017478 147.73 2 656360000 656360000 324 49 324 470;471 573;574 573 2 VDVLDPALLR FSSDDRVKVLAATNRVDVLDPALLRSGRLD AATNRVDVLDPALLRSGRLDRKIEFPLPSE R V D L R S 1 1 0 2 0 0 0 0 0 0 3 0 0 0 1 0 0 0 0 2 0 0 10 0 1109.6445 P33297 P33297 330 339 RPT5 26S protease regulatory subunit 6A yes yes 2 0.0047717 150.36 5 0 0 325 31 325 472;473;474;475;476 575;576;577;578;579 575 5 VEFEKPLLLLSEK GFISPYFITDPKSSKVEFEKPLLLLSEKKI SKVEFEKPLLLLSEKKISSIQDILPALEIS K V E E K K 0 0 0 0 0 0 3 0 0 0 4 2 0 1 1 1 0 0 0 1 0 0 13 1 1543.8861 P19882 P19882 234 246 HSP60 Heat shock protein 60, mitochondrial yes yes 3 0.019731 70.68 1 678030 678030 326 25 326 477 580 580 1 VEFSLPDLEGR TLDPALLRPGRIDRKVEFSLPDLEGRANIF IDRKVEFSLPDLEGRANIFRIHSKSMSVER K V E G R A 0 1 0 1 0 0 2 1 0 0 2 0 0 1 1 1 0 0 0 1 0 0 11 0 1260.635 P33299 P33299 375 385 RPT1 26S protease regulatory subunit 7 homolog yes yes 2 0.00043522 170.47 1 3111200 3111200 327 33 327 478 581 581 1 VEGSGGGDSEVQR SIIFMDEIDSIGSTRVEGSGGGDSEVQRTM TRVEGSGGGDSEVQRTMLELLNQLDGFETS R V E Q R T 0 1 0 1 0 1 2 4 0 0 0 0 0 0 0 2 0 0 0 2 0 0 13 0 1275.5691 Q01939 Q01939 258 270 RPT6 26S protease regulatory subunit 8 homolog yes yes 2 2.442E-10 243.91 1 7526200 7526200 328 51 328 479 582 582 1 VEIPLPNEAGR TLDPALLRPGRLDRKVEIPLPNEAGRLEIF LDRKVEIPLPNEAGRLEIFKIHTAKVKKTG K V E G R L 1 1 1 0 0 0 2 1 0 1 1 0 0 0 2 0 0 0 0 1 0 0 11 0 1193.6404 P53549 P53549 347 357 RPT4 26S protease subunit RPT4 yes yes 2 0.015093 107.11 1 545620000 545620000 329 49 329 480 583;584 584 2 VGGASEVEVGEK QERLAKLSGGVAVIRVGGASEVEVGEKKDR VIRVGGASEVEVGEKKDRYDDALNATRAAV R V G E K K 1 0 0 0 0 0 3 3 0 0 0 1 0 0 0 1 0 0 0 3 0 0 12 0 1159.5721 P19882 P19882 403 414 HSP60 Heat shock protein 60, mitochondrial yes yes 2 0.0022093 144.55 1 5993800 5993800 330 25 330 481 585 585 1 VGIKPPK EVIELPLKNPEIFQRVGIKPPKGVLLYGPP KNPEIFQRVGIKPPKGVLLYGPPGTGKTLL R V G P K G 0 0 0 0 0 0 0 1 0 1 0 2 0 0 2 0 0 0 0 1 0 0 7 1 737.47996 P53549 P53549 210 216 RPT4 26S protease subunit RPT4 yes yes 2 0.0068883 113.08 1 703150000 703150000 331 49 331 482 586 586 1 VIEFLSANK NPMDLRRGSQVAVEKVIEFLSANKKEITTS QVAVEKVIEFLSANKKEITTSEEIAQVATI K V I N K K 1 0 1 0 0 0 1 0 0 1 1 1 0 1 0 1 0 0 0 1 0 0 9 0 1019.5651 P19882 P19882 148 156 HSP60 Heat shock protein 60, mitochondrial yes yes 2 0.0002926 175.91 1 1245300 1245300 332 25 332 483 587 587 1 VIEHNLR GGEANKHHWEDLQKRVIEHNLRVISEYYSR HWEDLQKRVIEHNLRVISEYYSRITLLRLN R V I L R V 0 1 1 0 0 0 1 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 7 0 879.49265 Q12250 Q12250 345 351 RPN5 26S proteasome regulatory subunit RPN5 yes yes 2 0.017275 107.59 1 39928000 39928000 333 57 333 484 588 588 1 VIGSELVQK CARAVANRTDATFIRVIGSELVQKYVGEGA DATFIRVIGSELVQKYVGEGARMVRELFEM R V I Q K Y 0 0 0 0 0 1 1 1 0 1 1 1 0 0 0 1 0 0 0 2 0 0 9 0 971.56515 P33299 P33299 274 282 RPT1 26S protease regulatory subunit 7 homolog yes yes 2 0.00048802 166.68 1 46762000 46762000 334 33 334 485 589 589 1 VIMATNR LLTQMDGFDQSTNVKVIMATNRADTLDPAL FDQSTNVKVIMATNRADTLDPALLRPGRLD K V I N R A 1 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 1 0 0 7 0 803.43236 P33298 P33298 314 320 RPT3 26S protease regulatory subunit 6B homolog yes yes 2 0.017658 107.32 1 214420000 214420000 335 32 335 486 590 590 1 VISEYYSR HWEDLQKRVIEHNLRVISEYYSRITLLRLN VIEHNLRVISEYYSRITLLRLNELLDLTES R V I S R I 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 2 0 0 2 1 0 0 8 0 1015.4975 Q12250 Q12250 352 359 RPN5 26S proteasome regulatory subunit RPN5 yes yes 2 0.00087215 150.4 1 34298000 34298000 336 57 336 487 591 591 1 VKTKTSEEK GEDKETEGTEEKVKKVKTKTSEEKKENESG EEKVKKVKTKTSEEKKENESGHFQDAIDGY K V K E K K 0 0 0 0 0 0 2 0 0 0 0 3 0 0 0 1 2 0 0 1 0 0 9 2 1048.5764 P29056 P29056 407 415 BRF1 Transcription factor IIIB 70 kDa subunit yes yes 3 0.021323 42.599 1 0 0 337 28 337 488 592 592 2;16;17 0 VLAATNR LLNQLDGFSSDDRVKVLAATNRVDVLDPAL FSSDDRVKVLAATNRVDVLDPALLRSGRLD K V L N R V 2 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 7 0 743.42899 P33297 P33297 323 329 RPT5 26S protease regulatory subunit 6A yes yes 2 0.0002631 168.74 1 639100000 639100000 338 31 338 489 593 593 1 VLAVGDGIAR IKGVSDEANLNETGRVLAVGDGIARVFGLN NETGRVLAVGDGIARVFGLNNIQAEELVEF R V L A R V 2 1 0 1 0 0 0 2 0 1 1 0 0 0 0 0 0 0 0 2 0 0 10 0 969.56073 P07251 P07251 68 77 ATP1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.020607 102.62 1 9158200 9158200 339 20 339 490 594 594 1 VLDELTLAR ALRQTVEADVNGLRRVLDELTLARTDLEMQ VNGLRRVLDELTLARTDLEMQIEGLKEELA R V L A R T 1 1 0 1 0 0 1 0 0 0 3 0 0 0 0 0 1 0 0 1 0 0 9 0 1028.5866 CON__P02533;CON__Q6IFX2;CON__P19012;CON__A2A4G1;CON__P08727;CON__P19001;CON__P08779 CON__P08779 226 234 no no 2 0.0001523 182.53 1 8989000 8989000 + 340 3;9 340 491 595 595 1 VLNEISK EKKYAEEDQVQELLKVLNEISKTTLTLDPR DQVQELLKVLNEISKTTLTLDPRYIWRSLK K V L S K T 0 0 1 0 0 0 1 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 7 0 801.45962 P40016 P40016 37 43 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 0.004622 132.08 1 58568000 58568000 341 39 341 492 596 596 1 VLVLDTDYKK KIPAVFKIDALNENKVLVLDTDYKKYLLFC LNENKVLVLDTDYKKYLLFCMENSAEPEQS K V L K K Y 0 0 0 2 0 0 0 0 0 0 2 2 0 0 0 0 1 0 1 2 0 0 10 1 1192.6703 CON__P02754 CON__P02754 92 101 yes yes 3 0.017238 83.647 1 2915700 2915700 + 342 5 342 493 597 597 1 VNGSEFVHK LVKAVANSTKAAFIRVNGSEFVHKYLGEGP KAAFIRVNGSEFVHKYLGEGPRMVRDVFRL R V N H K Y 0 0 1 0 0 0 1 1 1 0 0 1 0 1 0 1 0 0 0 2 0 0 9 0 1015.5087 P33298 P33298 237 245 RPT3 26S protease regulatory subunit 6B homolog yes yes 2 0.0033929 138.06 1 123310000 123310000 343 32 343 494 598 598 1 VPQVSTPTLVEVSR EYGFQNALIVRYTRKVPQVSTPTLVEVSRS KVPQVSTPTLVEVSRSLGKVGTRCCTKPES K V P S R S 0 1 0 0 0 1 1 0 0 0 1 0 0 0 2 2 2 0 0 4 0 0 14 0 1510.8355 CON__P02768-1;CON__P02769 CON__P02769 438 451 no no 2 0.00049901 164.22 1 12047000 12047000 + 344 7;6 344 495 599 599 1 VQALEEANNDLENK TMQELNSRLASYLDKVQALEEANNDLENKI KVQALEEANNDLENKIQDWYDKKGPAAIQK K V Q N K I 2 0 3 1 0 1 3 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 14 0 1585.7584 CON__P35527 CON__P35527 171 184 yes yes 2 8.6861E-17 296.28 1 41946000 41946000 + 345 12 345 496 600 600 1 VQETLQTYK DAAVVGQEHYDVASKVQETLQTYKSLQDII YDVASKVQETLQTYKSLQDIIAILGMDELS K V Q Y K S 0 0 0 0 0 2 1 0 0 0 1 1 0 0 0 0 2 0 1 1 0 0 9 0 1108.5764 P00830 P00830 407 415 ATP2 ATP synthase subunit beta, mitochondrial yes yes 2 0.00050088 166.07 1 118380000 118380000 346 17 346 497 601 601 1 VSDDSESESGDKEATAPLIQR NKKIQEQRVKDKQSKVSDDSESESGDKEAT SESGDKEATAPLIQRKNKKN__________ K V S Q R K 2 1 0 3 0 1 3 1 0 1 1 1 0 0 1 4 1 0 0 1 0 0 21 1 2233.0346 Q08723 Q08723 313 333 RPN8 26S proteasome regulatory subunit RPN8 yes yes 3 3.2003E-05 140.89 1 4220800 4220800 347 55 347 498 602 602 0 VSGAELVQK LARAVAHHTDCKFIRVSGAELVQKYIGEGS DCKFIRVSGAELVQKYIGEGSRMVRELFVM R V S Q K Y 1 0 0 0 0 1 1 1 0 0 1 1 0 0 0 1 0 0 0 2 0 0 9 0 929.5182 Q01939 Q01939 213 221 RPT6 26S protease regulatory subunit 8 homolog yes yes 2 3.3317E-06 204.62 1 12010000 12010000 348 51 348 499 603 603 1 VSPTDIEEGMR NLKQIAKFVVGLGERVSPTDIEEGMRVGVD LGERVSPTDIEEGMRVGVDRSKYNIELPLP R V S M R V 0 1 0 1 0 0 2 1 0 1 0 0 1 0 1 1 1 0 0 1 0 0 11 0 1232.5707 P33299 P33299 163 173 RPT1 26S protease regulatory subunit 7 homolog yes yes 2 0.012312 109.83 1 7145900 7145900 349 33 349 500 604 604 1 VTLDITTLTIMR VRNSVDRSKLKKGVRVTLDITTLTIMRILP GVRVTLDITTLTIMRILPRETDPLVYNMTS R V T M R I 0 1 0 1 0 0 0 0 0 2 2 0 1 0 0 0 4 0 0 1 0 0 12 0 1375.7745 P53549 P53549 146 157 RPT4 26S protease subunit RPT4 yes yes 2 2.8822E-11 263.11 1 7898200 7898200 350 49 350 501 605 605 1 VTMQNLNDR GGFAGGDGLLVGSEKVTMQNLNDRLASYLD LVGSEKVTMQNLNDRLASYLDKVRALEEAN K V T D R L 0 1 2 1 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 9 0 1089.5237 CON__P02533;CON__A2A4G1;CON__Q7Z3Y9;CON__P13645;CON__Q7Z3Z0;CON__Q7Z3Y8;CON__Q148H6;CON__Q7Z3Y7;CON__P02535-1;CON__P08779;CON__Q9Z2K1;CON__Q3ZAW8 CON__P08779 119 127 no no 2 0.00023669 178.55 1 42725000 42725000 + 351 3;9;10 351 502 606 606 1 VTNSFALPFEEDEK CVGVILGDANSSTIRVTNSFALPFEEDEKN RVTNSFALPFEEDEKNSDVWFLDHNYIENM R V T E K N 1 0 1 1 0 0 3 0 0 0 1 1 0 2 1 1 1 0 0 1 0 0 14 0 1624.7621 Q08723 Q08723 48 61 RPN8 26S proteasome regulatory subunit RPN8 yes yes 2 3.0227E-10 228.78 1 2608800 2608800 352 55 352 503 607 607 1 VVDALGNPIDGK GNIVDVPVGPGLLGRVVDALGNPIDGKGPI LGRVVDALGNPIDGKGPIDAAGRSRAQVKA R V V G K G 1 0 1 2 0 0 0 2 0 1 1 1 0 0 1 0 0 0 0 2 0 0 12 0 1196.6401 P07251 P07251 144 155 ATP1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.0048533 131.12 1 12847000 12847000 353 20 353 504 608 608 1 VVDQLFEK ATYDSALELVGQLNKVVDQLFEKASVLY__ LVGQLNKVVDQLFEKASVLY__________ K V V E K A 0 0 0 1 0 1 1 0 0 0 1 1 0 1 0 0 0 0 0 2 0 0 8 0 976.52295 Q12377 Q12377 422 429 RPN6 26S proteasome regulatory subunit RPN6 yes yes 2 3.3968E-06 204.62 1 9871300 9871300 354 58 354 505 609 609 1 VVSTHEQVLR SRQIRTKVMDVHDGKVVSTHEQVLRTKN__ VHDGKVVSTHEQVLRTKN____________ K V V L R T 0 1 0 0 0 1 1 0 1 0 1 0 0 0 0 1 1 0 0 3 0 0 10 0 1166.6408 CON__P02533 CON__P02533 460 469 yes yes 2 0.021623 81.525 1 1913400 1913400 + 355 3 355 506 610 610 0 WDDLNEQLTLLSK EVLAKIVDLLASRNKWDDLNEQLTLLSKKH NKWDDLNEQLTLLSKKHGQLKLSIQYMIQK K W D S K K 0 0 1 2 0 1 1 0 0 0 4 1 0 0 0 1 1 1 0 0 0 0 13 0 1573.7988 Q12250 Q12250 72 84 RPN5 26S proteasome regulatory subunit RPN5 yes yes 2 3.911E-16 282.21 1 1236000 1236000 356 57 356 507 611 611 1 WELLQQVDTSTR KVRFLEQQNQVLQTKWELLQQVDTSTRTHN QTKWELLQQVDTSTRTHNLEPYFESFINNL K W E T R T 0 1 0 1 0 2 1 0 0 0 2 0 0 0 0 1 2 1 0 1 0 0 12 0 1474.7416 CON__P04264 CON__P04264 212 223 yes yes 2 1.3159E-15 267.07 1 19453000 19453000 + 357 8 357 508 612;613 612 2 YEDEINKR ELKNMQDMVEDYRNKYEDEINKRTNAENEF VEDYRNKYEDEINKRTNAENEFVTIKKDVD K Y E K R T 0 1 1 1 0 0 2 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 8 1 1065.5091 CON__P04264;CON__H-INV:HIT000016045;CON__P02538;CON__P48668;CON__P04259;CON__Q8VED5;CON__O95678;CON__P35908v2;CON__P35908;CON__Q7Z794;CON__P13647 CON__P04264 270 277 no no 2;3 0.0023127 130.22 2 21716000 21716000 + 358 8;13;4;11 358 509;510 614;615 614 2 YENEVALR QIDNARLAADDFRLKYENEVALRQSVEADI ADDFRLKYENEVALRQSVEADINGLRRVLD K Y E L R Q 1 1 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 8 0 992.49271 CON__P13645 CON__P13645 238 245 yes yes 2 0.0028537 140.35 1 7599700 7599700 + 359 10 359 511 616 616 1 YFFYLSK LEYPHTDVSSSLEARYFFYLSKINAIQLDY VSSSLEARYFFYLSKINAIQLDYSTANEYI R Y F S K I 0 0 0 0 0 0 0 0 0 0 1 1 0 2 0 1 0 0 2 0 0 0 7 0 966.48511 P40016 P40016 272 278 RPN3 26S proteasome regulatory subunit RPN3 yes yes 2 0.00044559 154.09 1 13440000 13440000 360 39 360 512 617 617 1 YGQQGSGSGQSPSR SSHGQHGSGSSQSSRYGQQGSGSGQSPSRG RYGQQGSGSGQSPSRGRHGSDFGHSSSYGQ R Y G S R G 0 1 0 0 0 3 0 4 0 0 0 0 0 0 1 4 0 0 1 0 0 0 14 0 1394.6175 CON__Q86YZ3 CON__Q86YZ3 649 662 yes yes 2 0.00034347 166.86 1 0 0 + 361 15 361 513 618 618 1 YLDGLTAER NLEPIFQGYIDSLKRYLDGLTAERTSQNSE IDSLKRYLDGLTAERTSQNSELNNMQDLVE R Y L E R T 1 1 0 1 0 0 1 1 0 0 2 0 0 0 0 0 1 0 1 0 0 0 9 0 1036.5189 CON__P35908v2;CON__P35908 CON__P35908v2 239 247 yes no 2 0.0082596 113.71 1 3266000 3266000 + 362 13 362 514 619 619 1 YLELQKESEK ELEDKLKASEDKNSKYLELQKESEKIKEEL DKNSKYLELQKESEKIKEELDAKTTELKIQ K Y L E K I 0 0 0 0 0 1 3 0 0 0 2 2 0 0 0 1 0 0 1 0 0 0 10 1 1265.6503 P25386 P25386 1291 1300 USO1 Intracellular protein transport protein USO1 yes yes 3 0.017005 95.775 1 0 0 363 27 363 515 620 620 1 0 YLYVDEPEVK SIYQWNLDGLQQLDKYLYVDEPEVKAGALL QQLDKYLYVDEPEVKAGALLGIGISASGVH K Y L V K A 0 0 0 1 0 0 2 0 0 0 1 1 0 0 1 0 0 0 2 2 0 0 10 0 1253.618 P38764 P38764 439 448 RPN1 26S proteasome regulatory subunit RPN1 yes yes 2 0.0051576 128.12 1 4490700 4490700 364 37 364 516 621 621 1 YNIELPLPPR TDIEEGMRVGVDRSKYNIELPLPPRIDPSV VDRSKYNIELPLPPRIDPSVTMMTVEEKPD K Y N P R I 0 1 1 0 0 0 1 0 0 1 2 0 0 0 3 0 0 0 1 0 0 0 10 0 1210.671 P33299 P33299 181 190 RPT1 26S protease regulatory subunit 7 homolog yes yes 2 0.0060932 123.86 1 3874800 3874800 365 33 365 517 622 622 1 YVILQSDLEEAYATQVK AIMQEAGLRAVRKNRYVILQSDLEEAYATQ ILQSDLEEAYATQVKTDNTVDKFDFYK___ R Y V V K T 2 0 0 1 0 2 2 0 0 1 2 1 0 0 0 1 1 0 2 2 0 0 17 0 1969.0044 P33298 P33298 400 416 RPT3 26S protease regulatory subunit 6B homolog yes yes 2;3 5.0935E-11 272.72 3 76373000 76373000 366 32 366 518;519;520 623;624;625;626 625 4