Raw file	Experiment	Enzyme	Enzyme mode	Enzyme first search	Enzyme mode first search	Use enzyme first search	Variable modifications	Multi modifications	Variable modifications first search	Use variable modifications first search	Requantify	Multiplicity	Max. missed cleavages	Labels0	LC-MS run type	Time-dependent recalibration	MS	MS/MS	MS3	MS/MS Submitted	MS/MS Submitted (SIL)	MS/MS Submitted (ISO)	MS/MS Submitted (PEAK)	MS/MS Identified	MS/MS Identified (SIL)	MS/MS Identified (ISO)	MS/MS Identified (PEAK)	MS/MS Identified [%]	MS/MS Identified (SIL) [%]	MS/MS Identified (ISO) [%]	MS/MS Identified (PEAK) [%]	Peptide Sequences Identified	Peaks	Peaks Sequenced	Peaks Sequenced [%]	Peaks Repeatedly Sequenced	Peaks Repeatedly Sequenced [%]	Isotope Patterns	Isotope Patterns Sequenced	Isotope Patterns Sequenced (z>1)	Isotope Patterns Sequenced [%]	Isotope Patterns Sequenced (z>1) [%]	Isotope Patterns Repeatedly Sequenced	Isotope Patterns Repeatedly Sequenced [%]	Recalibrated	Av. Absolute Mass Deviation [ppm]	Mass Standard Deviation [ppm]	Av. Absolute Mass Deviation [mDa]	Mass Standard Deviation [mDa]
B190130_09_HF_LS_IN_130_1DF_26S_b01_buffEx_rep2	buffEx	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)			False	False	1	2		Standard		12524	26140	0	29281	22999	0	6282	6577	6392	0	185	22.46	27.79	NaN	2.94	2938	1427794	23718	1.66	1459	6.15	120726	19647	19108	16.27	18.93	2251	11.46	+	0.3169	0.43069	0.21723	0.31169
B190130_10_HF_LS_IN_130_1DF_26S_b01_buffEx_rep3	buffEx	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)			False	False	1	2		Standard		12379	26594	0	29710	23478	0	6232	6572	6394	0	178	22.12	27.23	NaN	2.86	2976	1443738	24150	1.67	1481	6.13	122149	20116	19568	16.47	19.19	2256	11.21	+	0.3205	0.43938	0.21898	0.31798
B190130_12_HF_LS_IN_130_1DF_26S_b01_crude_rep1	crude	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)			False	False	1	2		Standard		13350	23461	0	25835	21087	0	4748	6013	5899	0	114	23.27	27.97	NaN	2.4	2843	1500749	21318	1.42	1356	6.36	122795	18090	17580	14.73	17.52	2012	11.12	+	0.31045	0.42023	0.21375	0.31137
B190130_13_HF_LS_IN_130_1DF_26S_b01_crude_rep2	crude	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)			False	False	1	2		Standard		13321	23599	0	25950	21248	0	4702	6016	5881	0	135	23.18	27.68	NaN	2.87	2860	1516495	21447	1.41	1338	6.24	124347	18167	17648	14.61	17.3	2051	11.29	+	0.30735	0.4116	0.21213	0.30488
B190130_14_HF_LS_IN_130_1DF_26S_b01_crude_rep3	crude	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)			False	False	1	2		Standard		13311	23671	0	26024	21318	0	4706	6075	5967	0	108	23.34	27.99	NaN	2.29	2859	1528840	21488	1.41	1371	6.38	125502	18294	17788	14.58	17.29	2026	11.07	+	0.31655	0.42692	0.21639	0.31088
B190130_08_HF_LS_IN_130_1DF_26S_b01_buffEx_rep1	buffEx	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)			False	False	1	2		Standard		12600	25943	0	28969	22917	0	6052	6582	6408	0	174	22.72	27.96	NaN	2.88	2932	1373227	23507	1.71	1452	6.18	118188	19563	19015	16.55	19.36	2236	11.43	+	0.32073	0.43604	0.21992	0.31884
buffEx																																3485																	
crude																																3337																	
Total																	77485	149408	0	165769	133047	0	32722	37835	36941	0	894	22.82	27.77	NaN	2.73	3835	8790843					733707	113877	110707	15.52	18.26	12832	11.27		0.31556	0.42787	0.21649	0.31277