Raw file	Experiment	Enzyme	Enzyme mode	Enzyme first search	Enzyme mode first search	Use enzyme first search	Variable modifications	Fixed modifications	Multi modifications	Variable modifications first search	Use variable modifications first search	Requantify	Multiplicity	Max. missed cleavages	Labels0	LC-MS run type	Time-dependent recalibration	MS	MS/MS	MS3	MS/MS Submitted	MS/MS Submitted (SIL)	MS/MS Submitted (ISO)	MS/MS Submitted (PEAK)	MS/MS Identified	MS/MS Identified (SIL)	MS/MS Identified (ISO)	MS/MS Identified (PEAK)	MS/MS Identified [%]	MS/MS Identified (SIL) [%]	MS/MS Identified (ISO) [%]	MS/MS Identified (PEAK) [%]	Peptide Sequences Identified	Peaks	Peaks Sequenced	Peaks Sequenced [%]	Peaks Repeatedly Sequenced	Peaks Repeatedly Sequenced [%]	Isotope Patterns	Isotope Patterns Sequenced	Isotope Patterns Sequenced (z>1)	Isotope Patterns Sequenced [%]	Isotope Patterns Sequenced (z>1) [%]	Isotope Patterns Repeatedly Sequenced	Isotope Patterns Repeatedly Sequenced [%]	Recalibrated	Av. Absolute Mass Deviation [ppm]	Mass Standard Deviation [ppm]	Av. Absolute Mass Deviation [mDa]	Mass Standard Deviation [mDa]	Label free norm param
QUIQUE_C1218_190116_001	C1218	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		16175	179083	0	235133	123033	0	112100	42918	39806	0	3112	18.25	32.35	NaN	2.78	25357	1722858	158822	9.22	11196	7.05	194856	94290	90879	48.39	55.45	21852	23.18	+	0.85164	1.1918	0.62572	0.92281	
QUIQUE_C1277_190116_001	C1277	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		16446	177763	0	234978	120548	0	114430	45776	42438	0	3338	19.48	35.2	NaN	2.92	26566	1731791	157085	9.07	11100	7.07	192612	92304	89007	47.92	54.39	21472	23.26	+	0.84799	1.1843	0.62499	0.9196	
QUIQUE_C1368_190116_001	C1368	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		16429	179295	0	240180	118410	0	121770	44489	40952	0	3537	18.52	34.58	NaN	2.9	25326	1724134	156855	9.1	11178	7.13	192892	90058	86808	46.69	53.14	21242	23.59	+	0.84605	1.1836	0.62667	0.92606	
QUIQUE_C1403_190116_001	C1403	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		16672	175581	0	232434	118728	0	113706	41972	39121	0	2851	18.06	32.95	NaN	2.51	25392	1713438	155030	9.05	10690	6.9	191852	91191	87975	47.53	54.36	20891	22.91	+	0.83489	1.1686	0.61343	0.9031	
QUIQUE_C1438_190116_001	C1438	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		16238	181022	0	240246	121798	0	118448	40717	38044	0	2673	16.95	31.24	NaN	2.26	23961	1776626	160119	9.01	10900	6.81	197918	93456	90224	47.22	53.37	21587	23.1	+	0.85243	1.1923	0.6322	0.9309	
QUIQUE_C1563_190116_001	C1563	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		16713	174463	0	232739	116187	0	116552	38311	35715	0	2596	16.46	30.74	NaN	2.23	23014	1738517	152439	8.77	11055	7.25	197600	88556	85240	44.82	51.28	20795	23.48	+	0.84058	1.1745	0.61455	0.90305	
QUIQUE_C1576_190116_001	C1576	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		16119	180627	0	241003	120251	0	120752	40972	38178	0	2794	17	31.75	NaN	2.31	23830	1722944	158506	9.2	11283	7.12	191214	91262	88131	47.73	53.46	21726	23.81	+	0.8407	1.1734	0.62686	0.92304	
QUIQUE_DMIX1_190116_001	DMIX1	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		15829	177476	0	234019	120933	0	113086	48258	44718	0	3540	20.62	36.98	NaN	3.13	27559	1677193	156736	9.35	11188	7.14	189764	91836	88909	48.39	54.23	21920	23.87	+	0.81606	1.1478	0.60058	0.89241	
QUIQUE_DMIX3_190116_001	DMIX3	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		15814	181104	0	241483	120725	0	120758	47552	43812	0	3740	19.69	36.29	NaN	3.1	26101	1708482	159463	9.33	11290	7.08	191024	91381	88411	47.84	53.26	21971	24.04	+	0.84099	1.1828	0.62752	0.93247	
QUIQUE_DMIX4_190116_001	DMIX4	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		16672	165485	0	220370	110600	0	109770	35226	32894	0	2332	15.98	29.74	NaN	2.12	21684	1638068	145106	8.86	10842	7.47	177672	83665	80363	47.09	54.97	20320	24.29	+	0.80835	1.1348	0.5731	0.84597	
QUIQUE_DMIX5_190116_001	DMIX5	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		15757	184511	0	248126	120896	0	127230	51207	47175	0	4032	20.64	39.02	NaN	3.17	27499	1708282	162005	9.48	11719	7.23	187058	90577	87549	48.42	53.7	22397	24.73	+	0.82624	1.1655	0.61911	0.92154	
QUIQUE_DMIX7_190116_001	DMIX7	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		15860	180239	0	241314	119164	0	122150	44643	41605	0	3038	18.5	34.91	NaN	2.49	25341	1729131	158165	9.15	11399	7.21	192230	90260	87284	46.95	51.92	21625	23.96	+	0.83646	1.172	0.62176	0.91472	
QUIQUE_DMIX8_190116_001	DMIX8	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		16283	179224	0	240531	117917	0	122614	43137	40472	0	2665	17.93	34.32	NaN	2.17	24672	1688092	156692	9.28	11404	7.28	187115	88343	85348	47.21	52.98	21877	24.76	+	0.81521	1.1474	0.60367	0.89423	
Total																		211007	2315873	0	3082556	1549190	0	1533366	565178	524930	0	40248	18.33	33.88	NaN	2.62	48665	22279556					2483807	1177179	1136128	47.39	53.56	279675	23.76		0.83528	1.1711	0.61673	0.91129