Raw file Experiment Enzyme Enzyme mode Enzyme first search Enzyme mode first search Use enzyme first search Variable modifications Fixed modifications Multi modifications Variable modifications first search Use variable modifications first search Requantify Multiplicity Max. missed cleavages Labels0 LC-MS run type Time-dependent recalibration MS MS/MS MS3 MS/MS Submitted MS/MS Submitted (SIL) MS/MS Submitted (ISO) MS/MS Submitted (PEAK) MS/MS Identified MS/MS Identified (SIL) MS/MS Identified (ISO) MS/MS Identified (PEAK) MS/MS Identified [%] MS/MS Identified (SIL) [%] MS/MS Identified (ISO) [%] MS/MS Identified (PEAK) [%] Peptide Sequences Identified Peaks Peaks Sequenced Peaks Sequenced [%] Peaks Repeatedly Sequenced Peaks Repeatedly Sequenced [%] Isotope Patterns Isotope Patterns Sequenced Isotope Patterns Sequenced (z>1) Isotope Patterns Sequenced [%] Isotope Patterns Sequenced (z>1) [%] Isotope Patterns Repeatedly Sequenced Isotope Patterns Repeatedly Sequenced [%] Recalibrated Av. Absolute Mass Deviation [ppm] Mass Standard Deviation [ppm] Av. Absolute Mass Deviation [mDa] Mass Standard Deviation [mDa] Label free norm param 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP833 IMTACT ARC MTF BirA 2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14915 50294 0 63698 36890 0 26808 22197 20367 0 1830 35 55 0 6.8 15718 1151281 43462 3.8 3184 7.3 103053 31211 30407 30 38 5125 16 + 0.82422 1.0898 0.53061 0.73245 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP834_C18 IMTACT ARC MTF BirA 3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14633 53265 0 67420 39110 0 28310 23929 21592 0 2337 35 55 0 8.3 16601 1187519 46290 3.9 3196 6.9 113203 33353 32511 29 35 5248 16 + 0.94396 1.1901 0.5919 0.77335 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP832_C18 IMTACT ARC MTF BirA 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14350 54228 0 67781 40675 0 27106 25247 23179 0 2068 37 57 0 7.6 17062 1130280 47420 4.2 3270 6.9 111709 34658 33911 31 36 5423 16 + 0.88269 1.1365 0.55845 0.74873 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP858_C18 S elu 4 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14579 53439 0 69386 37492 0 31894 23325 20496 0 2829 34 55 0 8.9 16789 1245365 45085 3.6 3537 7.8 110672 31307 30288 28 34 5454 17 + 1.2898 1.5069 0.82028 0.98078 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP843_C18 NC elu 3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 17413 42380 0 55949 28811 0 27138 18275 15957 0 2318 33 55 0 8.5 13473 1264011 35403 2.8 3305 9.3 95201 23390 22634 25 32 4793 20 + 1.0023 1.2381 0.61461 0.77786 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP831 IMTACT ARC WT 3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14388 51432 0 64532 38332 0 26200 23478 21555 0 1923 36 56 0 7.3 17806 1162374 44968 3.9 3015 6.7 106841 32945 32113 31 38 4949 15 + 1.0062 1.2438 0.64921 0.83052 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP848_C18 S SN 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14191 53907 0 68024 39790 0 28234 23933 21639 0 2294 35 54 0 8.1 17090 1126107 46435 4.1 3459 7.4 107661 33450 32581 31 36 5633 17 + 1.3444 1.5717 0.94978 1.1943 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP837_C18 NC elu 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14699 52086 0 67964 36208 0 31756 22054 19416 0 2638 32 54 0 8.3 16427 1251363 44286 3.5 3127 7.1 111026 30659 29561 28 35 4937 16 + 1.108 1.3452 0.70077 0.87552 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP853_C18 S pre 3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14156 54479 0 69343 39615 0 29728 24894 22150 0 2744 36 56 0 9.2 17922 1146870 46883 4.1 3475 7.4 109612 33270 32439 30 35 5634 17 + 1.0622 1.3092 0.67617 0.86107 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP829_C18 IMTACT ARC WT 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 15859 46998 0 59692 34304 0 25388 21315 19427 0 1888 36 57 0 7.4 16047 1186613 40458 3.4 3268 8.1 101638 28861 28178 28 35 4992 17 + 0.99493 1.2283 0.60325 0.76501 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP839_C18 NC SN 2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14070 53769 0 68847 38691 0 30156 23613 21059 0 2554 34 54 0 8.5 17404 1168893 46108 3.9 3317 7.2 111325 32801 31922 29 35 5274 16 + 1.2271 1.4505 0.77682 0.94045 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP842_C18 NC SN 3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 15100 50229 0 64149 36309 0 27840 22820 20458 0 2362 36 56 0 8.5 16373 1231322 42560 3.5 3732 8.8 107387 29826 29039 28 34 5735 19 + 1.0163 1.2574 0.63859 0.81498 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP834 IMTACT ARC MTF BirA 3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 15110 50216 0 63841 36591 0 27250 22109 19969 0 2140 35 55 0 7.9 15677 1178747 43215 3.7 3238 7.5 103074 30874 29972 30 37 5128 17 + 0.87539 1.1262 0.56009 0.75167 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP844_C18 NC pre 4 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14204 53826 0 68794 38858 0 29936 24883 22146 0 2737 36 57 0 9.1 18383 1188185 46115 3.9 3319 7.2 115150 33087 32134 29 35 5183 16 + 1.0084 1.2595 0.64046 0.82909 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP849_C18 S elu 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14935 52143 0 67268 37018 0 30250 21351 19078 0 2273 32 52 0 7.5 15207 1232451 44347 3.6 3510 7.9 107665 30788 29788 29 35 5524 18 + 0.87705 1.1432 0.54279 0.73505 210202_C21_001_QHF1_Standard_Rev02_#21_005_mixPAP842l843_C18 NC SN elu 3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14652 52114 0 67479 36749 0 30730 23258 20485 0 2773 34 56 0 9 17198 1224900 44498 3.6 3242 7.3 109389 30981 30079 28 35 5135 17 + 1.0275 1.2664 0.65145 0.82895 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP836_C18 NC SN 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14083 54014 0 68812 39216 0 29596 24432 21908 0 2524 36 56 0 8.5 18068 1168739 46425 4 3287 7.1 110748 33234 32256 30 36 5346 16 + 1.0395 1.2825 0.66116 0.84426 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP855_C18 S elu 3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14434 53585 0 69588 37582 0 32006 23554 20738 0 2816 34 55 0 8.8 17019 1232442 45509 3.7 3419 7.5 111795 31509 30517 28 34 5391 17 + 0.92931 1.191 0.59529 0.79586 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP838_C18 NC pre 2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14183 53257 0 67737 38777 0 28960 24182 21651 0 2531 36 56 0 8.7 17772 1181100 46137 3.9 3217 7 113332 33031 32099 29 35 5172 16 + 0.80744 1.0918 0.52984 0.75363 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP846_C18 NC elu 4 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14804 52141 0 68323 35959 0 32364 22454 19655 0 2799 33 55 0 8.6 16383 1263069 44239 3.5 3198 7.2 110937 30270 29202 27 34 5058 17 + 0.7851 1.0755 0.51129 0.73019 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP830_C18 IMTACT ARC WT 2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14794 52398 0 67426 37370 0 30056 22855 20293 0 2562 34 54 0 8.5 16453 1239583 44910 3.6 3369 7.5 111047 31586 30434 28 35 5241 17 + 0.86901 1.1327 0.54588 0.73885 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP856_C18 S pre 4 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14235 54269 0 68932 39606 0 29326 24497 21979 0 2518 36 55 0 8.6 17229 1187839 46957 4 3396 7.2 113368 33468 32561 30 34 5523 17 + 1.1743 1.4095 0.74264 0.91305 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP854_C18 S SN 3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14098 54209 0 69366 39052 0 30314 24632 21966 0 2666 36 56 0 8.8 17781 1173457 46293 3.9 3519 7.6 111241 32753 31893 29 35 5580 17 + 0.98126 1.2326 0.62353 0.81004 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP835_C18 NC pre 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 13889 54176 0 68682 39670 0 29012 24471 21994 0 2477 36 55 0 8.5 18065 1177037 47070 4 3109 6.6 116079 34063 33103 29 35 5066 15 + 1.0206 1.2727 0.65051 0.8403 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP833_C18 IMTACT ARC MTF BirA 2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14343 54154 0 68466 39842 0 28624 25114 22686 0 2428 37 57 0 8.5 17564 1168654 47081 4 3184 6.8 114488 34193 33377 30 35 5157 15 + 0.7632 1.0434 0.49967 0.72226 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP841_C18 NC pre 3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14432 53040 0 67687 38393 0 29294 24435 21760 0 2675 36 57 0 9.1 17886 1196115 45617 3.8 3260 7.1 112968 32601 31729 29 35 5205 16 + 1.0441 1.2885 0.6585 0.84041 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP851_C18 S SN 2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14058 54737 0 69633 39841 0 29792 24317 21733 0 2584 35 55 0 8.7 17381 1184360 47144 4 3577 7.6 110758 33410 32446 30 35 5705 17 + 0.88631 1.1562 0.56721 0.77473 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP850_C18 S pre 2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14073 54386 0 69128 39644 0 29484 24443 21895 0 2548 35 55 0 8.6 17488 1132748 46868 4.1 3430 7.3 108578 33354 32519 31 36 5629 17 + 0.99326 1.2445 0.62854 0.8141 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP830 IMTACT ARC WT 2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 16165 45647 0 59234 32060 0 27174 19416 17608 0 1808 33 55 0 6.7 14679 1189111 39151 3.3 2696 6.9 96408 27245 26357 28 38 4399 16 + 0.72452 0.99998 0.46453 0.66587 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP829 IMTACT ARC WT 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14148 52461 0 66298 38624 0 27674 24443 22279 0 2164 37 58 0 7.8 18320 1146397 45937 4 2891 6.3 106292 33303 32382 31 39 4888 15 + 1.0655 1.2984 0.6847 0.85761 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP852_C18 S elu 2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14358 54219 0 69614 38824 0 30790 24381 21672 0 2709 35 56 0 8.8 17246 1227704 46459 3.8 3370 7.3 111822 32566 31610 29 34 5564 17 + 0.94802 1.2012 0.59626 0.78149 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP857_C18 S SN 4 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14047 54354 0 69140 39568 0 29572 24378 21858 0 2520 35 55 0 8.5 17380 1188682 46820 3.9 3514 7.5 112029 33359 32409 30 35 5564 17 + 0.99423 1.2509 0.63595 0.8289 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP840_C18 NC elu 2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14577 53287 0 69085 37489 0 31596 23019 20295 0 2724 33 54 0 8.6 16949 1237694 45540 3.7 3171 7 111954 31762 30652 28 35 5111 16 + 1.114 1.3533 0.70121 0.87497 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP847_C18 S pre 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14086 54483 0 68787 40179 0 28608 25060 22506 0 2554 36 56 0 8.9 18085 1157690 46940 4.1 3480 7.4 111882 33831 33019 30 36 5633 17 + 0.80444 1.0918 0.5388 0.77196 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP831_C18 IMTACT ARC WT 3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14263 53991 0 67323 40659 0 26664 26051 23644 0 2407 39 58 0 9 19265 1213786 47520 3.9 3107 6.5 118316 35041 34119 30 35 5210 15 + 0.98179 1.2347 0.61818 0.8047 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP845_C18 NC SN 4 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14111 54337 0 69447 39227 0 30220 24771 22059 0 2712 36 56 0 9 18246 1207211 46668 3.9 3382 7.2 114735 33289 32313 29 35 5297 16 + 1.0988 1.3378 0.69556 0.87336 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP832 IMTACT ARC MTF BirA 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14226 53362 0 67036 39688 0 27348 23701 21615 0 2086 35 54 0 7.6 16273 1097190 46235 4.2 3332 7.2 104078 33668 32839 32 38 5394 16 + 1.1808 1.3942 0.7579 0.91845 190717_C19_014_QHF2_Standrad_Rev02_#19_029_PAP288 grad_1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 12517 57521 0 69103 45939 0 23164 26739 24948 0 1791 39 54 0 7.7 20012 947350 52869 5.6 1901 3.6 108838 41601 40947 38 42 4021 9.7 + 0.61578 0.89835 0.42757 0.65887 190717_C19_014_QHF2_Standrad_Rev02_#19_029_PAP289 grad_2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 12908 58321 0 69751 46891 0 22860 29277 27214 0 2063 42 58 0 9 21627 966679 53406 5.5 2234 4.2 108728 42078 41376 39 43 4453 11 + 0.61605 0.90855 0.42894 0.66886 190717_C19_014_QHF2_Standrad_Rev02_#19_029_PAP290 grad_3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 12873 57702 0 69176 46228 0 22948 28087 26144 0 1943 41 57 0 8.5 20750 949357 52845 5.6 2200 4.2 106776 41482 40772 39 43 4385 11 + 0.60953 0.89783 0.42481 0.66262 Total 576959 2118856 0 2691941 1545771 0 1146170 955390 859073 0 96317 35 56 0 8.4 57188 46910275 4381803 1314158 1278488 30 36 208159 16 0.95593 1.2196 0.61372 0.81329